LOCUS       DASSVL010000001         3480 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_113016, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000001 DASSVL010000000
VERSION     DASSVL010000001.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3480)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3480)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3480
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_113016"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..441)
                     /locus_tag="VFM52_00005"
     CDS             complement(<1..441)
                     /locus_tag="VFM52_00005"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HET8763579.1"
                     /translation="MTDSSTITPIADTVVGITVLSLFDAQCRRAPGRVAVRCAGRGLL
                     YAELDARANAVAAALIAAGTRRGDRVGVSLPRSEHMLVAVLGVLKTGAAYVPLDPAFP
                     LERLAYMADHARLRQIVSWQRADVPASVAEGREVLELATLPATPP"
     gene            complement(563..>3480)
                     /locus_tag="VFM52_00010"
     CDS             complement(563..>3480)
                     /locus_tag="VFM52_00010"
                     /inference="COORDINATES: protein motif:HMM:NF012873.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="condensation domain-containing protein"
                     /protein_id="HET8763580.1"
                     /translation="DDRLVAVTTLSFDIAFLELMLPLAVGASVVVATRDEVRDGAALR
                     QLVETTSATFLQATPAGWRLLLDAGWQGRPDFVAVSGGEPLTRDLAEALLARCGTVWN
                     AYGPTECTVWSTFWKVANPARGITIGRPLPGTTAWVLDAANRPCPPGISGELWIGGAG
                     VADGYLRRPALTAERFVADPFSTAPGARLYRTGDRGRWNAHGLLEHQGRADFQIKVRG
                     YRIEPGEIEARLVAGPGVAQAVVVAREARPGDVRLVAYVAAQDGAAINEAAVRERLHG
                     QLPDYMVPQHVVVLAALPRLPNGKLDRARLPTPAVATPSINARPADDTPCDDIEHELA
                     RMMADVLGHPCGRTEDFFAAGGHSLLAAQFIARVNRACDTRLTLRTMFEAPTVARLAE
                     GIRRARQGGADAVAPIARRADRVFAPLTSMQQRVWYVEQMHPGSVAWNTPSAHRLRGD
                     MDVAAFERALQAIVQRQSVLRTGIEMGADGVRQRVSPQLDVRLPLEDLSQLPAATREA
                     QLQARLDALIEAPFDLAVAPLFRARLFRLAPQEHVFFFMAHHVIWDGWSFDLLYQEMA
                     ALYAAFAVGKPDPLPPLAVEYGDFAVWHRARFAGAARERQLAPWLARLANPPAPLALP
                     ADRPRPPRMSGQAATEWIRVGAAPLRAVHALADRLGTTAFVVLLAAFAALLQRLSGQS
                     DFVVSTPVRNRDEIELERVMGFFVNALPLRLMPQAGESFAQLVAATRQAVLDAFASPD
                     LPFEDLVRALHLPHDESRPPLAQAMFSFQDVRGRVTTWGGLQHEHLPVFQHGGAEDLG
                     LWFVEQADGLLGGLSFNTDIFEPATAQRFHAGYTALLASALATPDAALADLPMAAVAA
                     TVTAPAAPAASTPEDARNESDVPRGMSVEETRLAAIWCALIGVAEARPEDNFFDLGGH
                     SLLAIEMATRVQREFGVRLNLIDIATGTLATLAASLPTQPVARVGLGGRIRHWFGRP"
BASE COUNT          565 a         1290 c         1178 g          447 t
ORIGIN      
        1 cggcggcgtc gccggcagcg tggccagctc cagcacctcg cggccctcgg cgacgctggc
       61 cggcacgtcc gcgcgctgcc acgagacgat ctggcgcagg cgcgcatggt ccgccatgta
      121 ggcgagccgt tcgagcggga acgccgggtc gagcggcacg taggcggcgc cggtcttcag
      181 cacgccgagc acggccacca gcatgtgctc gctgcgcggc agcgacacgc ccacccggtc
      241 gccgcgccgc gtgccggcgg cgatcaacgc cgcagccacg gcgttcgccc gcgcgtccag
      301 ttcggcatac aacagcccgc gccccgcgca gcgcacggcg acgcgtcccg gcgcgcggcg
      361 acactgagcg tcaaagagcg acaacaccgt gatgccgaca accgtgtcgg caatgggggt
      421 gatggtggac gaatccgtca tgccgatggg ctccttcgtc aatttctgcg cgttatcccg
      481 gacccgggct gcggaaacat ccgcatggcc aagcgttccc atgcggccgc aaccacattg
      541 cctggcaggg cacgggtctc cttcatggac ggccaaacca gtggcggatg cgcccgccca
      601 acccgacgcg ggcgaccggc tgcgtcggca ggctggccgc cagggtcgcc agcgtgccgg
      661 tggcgatgtc gatcaagttg agccgcacgc cgaactcgcg ttgcacccgc gtcgccatct
      721 cgatggccag cagcgaatgc ccgccgaggt cgaaaaagtt gtcctccggc cgcgcctcgg
      781 cgacgccgat caaggcgcac cagatcgccg ccaatcgcgt ttcctcgaca ctcatgccac
      841 gcggtacatc gctttcgttg cgggcgtctt ccggcgtgga ggcggcgggc gcagcgggtg
      901 ccgtgacggt ggcggctacg gcagccatcg gcaggtcggc caatgccgcg tccggcgtcg
      961 ccagcgcgct ggccagcagt gccgtgtagc ccgcgtggaa gcgctgcgcc gtcgccggct
     1021 cgaagatgtc ggtattgaag ctcaggccgc cgagcaggcc gtccgcctgc tcgacaaacc
     1081 acagcccgag atcctccgcg ccaccatgct ggaacaccgg caggtgctcg tgttgcaggc
     1141 cgccccatgt cgtcacccgg ccacgcacgt cctggaacga aaacatggcc tgcgccagcg
     1201 gcggccgcga ctcgtcgtgc ggcaggtgca gcgcacgcac caggtcctca aacggcagat
     1261 ccgggctggc gaacgcgtcg agcaccgcct ggcgcgtggc cgccacgagc tgcgcaaagc
     1321 tctcgccggc ctgcggcatc aagcgcagcg gcagcgcgtt gacgaaaaag cccatgacgc
     1381 gttccagctc gatctcgtcg cgattgcgca ccggcgtgct gacgacgaaa tccgactgcc
     1441 cgctgagccg ctgcagcaac gccgcaaacg ccgccagcaa cacgacgaac gccgtggtgc
     1501 cgaggcggtc ggcaagcgca tgcacggcgc gcagcggtgc agcgccgacc cgtatccact
     1561 cggtcgcggc ctgcccggac atgcgcggcg gccgcggccg atccgccggc aaggccagcg
     1621 gcgccggcgg gttggccagc cgcgcaagcc acggcgcgag ttgccgctcg cgcgctgcgc
     1681 cggcaaaccg cgccctgtgc cacaccgcga aatcgccgta ttcgacagcc agcggcggca
     1741 atgggtcggg cttgcccacc gcgaatgccg cgtacaacgc ggccatctcc tggtacagca
     1801 ggtcgaacga ccagccatcc cagatgacgt ggtgggccat gaaaaagaac acgtgttcct
     1861 gcggcgccaa ccggaacagg cgcgcgcgga acagcggtgc gaccgccagg tcgaaaggcg
     1921 cctcgatcag cgcatccagc cgcgcttgca gctgcgcctc gcgcgtggcc gccggcagtt
     1981 gcgacaaatc ctccagcggc aggcgcacat ccaattgcgg cgacacgcgc tggcgcacgc
     2041 cgtcggcgcc catctcgatg ccggtgcgca gcaccgactg ccgctgcacg atggcctgca
     2101 aggcgcgctc gaacgccgcc acgtccatgt cgccacgcag gcgatgcgcc gacggcgtat
     2161 tccacgccac gctgcccgga tgcatctgtt cgacgtacca cacgcgctgc tgcatcgagg
     2221 tcagcggcgc gaacacgcga tcggcacgcc gcgcgatggg tgcaaccgcg tcggcgccac
     2281 cttggcgcgc gcgccggatt ccctcggcca gccgcgctac cgtgggcgcc tcgaacatcg
     2341 tgcgcagcgt gaggcgggta tcgcaggcac gattgacccg cgcgatgaat tgcgccgcca
     2401 gcagcgaatg cccgccggcg gcgaagaaat cctcggtgcg tccgcatgga tggccgagca
     2461 cgtcggccat catgcgggcc agctcgtgct cgatgtcgtc gcatggtgtg tcgtctgccg
     2521 gccgcgcgtt gatagacggc gtggcgacag caggtgtcgg cagccgagca cgatcgagct
     2581 tgccgttggg caggcgcggc agcgccgcca acaccaccac gtgctgcggc accatgtagt
     2641 ccggcaactg cccgtgcagc cgctcgcgca ctgcggcctc gttgatggct gccccatcct
     2701 gcgcagccac gtaggccacc aggcgcacgt cgccgggccg cgcctcgcgc gccacgacga
     2761 cggcttgcgc cacgcccggg ccggcaacca gccgggcctc gatctcgccc ggctcgatgc
     2821 ggtagccgcg caccttgatc tggaaatcgg cgcgcccttg atgctccagc aggccatggg
     2881 cattccagcg gccgcggtcg ccggtgcgat acaggcgcgc gcccggcgca gtggaaaacg
     2941 ggtcggcaac gaaccgctcg gcggtcaacg ccggacgccg cagataaccg tcggccacgc
     3001 cggcgccgcc aatccacagt tcaccggaaa tgcccggcgg acacggccgg ttcgccgcat
     3061 ccagcaccca cgccgtggtg cccggcagtg gccggccgat ggtgatgccg cgcgcagggt
     3121 tggcgacttt ccagaacgtc gaccacaccg tgcattcggt ggggccgtag gcgttccaca
     3181 ctgtgccgca gcgcgccagc agcgcctcgg cgagatcccg cgtcaacggc tcgccacccg
     3241 acaccgcgac aaaatcgggg cgcccctgcc agccggcgtc cagcagcaga cgccagccgg
     3301 ccggcgtggc ctgcaggaag gtggcgctgg tggtttccac cagctgccgc aaggcagcgc
     3361 cgtcgcgcac ttcgtcgcgc gtggccacca ccacgctcgc gccgaccgcg agcggcagca
     3421 tcaactccag gaacgcgatg tcgaacgaca gcgtggtgac cgccaccagc cggtcgtcag
//
LOCUS       DASSVL010000002         2184 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_649838, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000002 DASSVL010000000
VERSION     DASSVL010000002.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2184)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2184)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2184
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_649838"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..402
                     /locus_tag="VFM52_00015"
     CDS             <1..402
                     /locus_tag="VFM52_00015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008437133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translocase"
                     /protein_id="HET8763581.1"
                     /translation="LVLPAVVNIALLVAVAVVGHGNLVLFGLALPMLAVMVATTRGFA
                     YGMTKPAVDSLYTRVPRETRYKGKNFVETAVWRFGDLVVTSAVSGLRAVGVGVAGLAI
                     AGTGVALAATWVSTKAGWSPDLAPEEPRAEA"
     gene            complement(514..942)
                     /locus_tag="VFM52_00020"
     CDS             complement(514..942)
                     /locus_tag="VFM52_00020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017461455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HET8763582.1"
                     /translation="MRQVRQLLEGKNRSVYTITPEAPVLDAIKMMAEHRIGALLVMGG
                     GVLAGVVSERDYARKVILQGRSSAQTPTADIMRVNPPTVTPDTDVFDCMRLCTDSRVR
                     HLPVLEHGKVVGIISTGDLVKAVIDAQAEQIAHLERYITG"
     gene            complement(1035..1766)
                     /gene="mtgA"
                     /locus_tag="VFM52_00025"
     CDS             complement(1035..1766)
                     /gene="mtgA"
                     /locus_tag="VFM52_00025"
                     /EC_number="2.4.1.129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017461453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009274 - peptidoglycan-based cell wall
                     [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="monofunctional biosynthetic peptidoglycan
                     transglycosylase"
                     /protein_id="HET8763583.1"
                     /translation="MPHPLSPRRLLRWLAYAALSWVVLTELVVVVLRFVPPPTSAMMV
                     ERRVGALLRGEHGFHLRQHWVPWREVSPWAPLAMVAGEDQKFPYHHGFDFDSIHEAID
                     AADDGRRLRGASTISQQTAKNLFLWNGRSFVRKGLEAYFTVLLEFTWPKRRILEVYMN
                     IAELGDGIYGVGAASNIYFHTTPARLTPAQAARLAAVLPSPRRLHADRPSAYVMRRAG
                     WIERQMRQLGGPGYIEGHAPDRPPR"
     gene            1864..>2184
                     /locus_tag="VFM52_00030"
     CDS             1864..>2184
                     /locus_tag="VFM52_00030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007510848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0051082 - unfolded protein binding
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp33 family molecular chaperone HslO"
                     /protein_id="HET8763584.1"
                     /translation="MEQLPTDDVLHRFLLERAGVRGALVRLGPAWREIAGRAGYPLPV
                     RDLLGEALAASALMTAHIKLDGELSVQLKSDGDLRLLFAECSDRGRLRGIARWHDPVP
                     ASLAL"
BASE COUNT          310 a          754 c          759 g          361 t
ORIGIN      
        1 ctggtgctgc cggcggtggt gaacatcgcg ctgctggttg ccgtcgccgt cgtcgggcac
       61 ggcaacctcg tgctgttcgg gctggcgctg ccgatgctgg cggtgatggt ggcgaccacg
      121 cgcggctttg cctatggcat gaccaagccg gcggtcgact cgctgtacac gcgggtgccg
      181 cgcgagaccc gctacaaggg caagaacttc gtcgagaccg cggtgtggcg cttcggcgac
      241 ctcgtggtca ccagcgcggt gagcggcttg cgtgccgtcg gcgtgggcgt cgccgggctg
      301 gccattgccg gcaccggcgt cgcgcttgcc gccacctggg tttccaccaa ggccggctgg
      361 tcgcccgatc tcgcccccga ggaaccacgc gccgaggcct gatgcccagg cccggccttt
      421 cccgaatcct ggatgacccg ctgccgccgc cgcggatcat cggtacaccg atattcacgc
      481 cggcgtcctg cctgcgcgag ccggacccga ccgtcatccc gtgatgtagc gctccagatg
      541 cgcgatctgc tccgcctggg cgtcgatcac ggccttcacc aggtcgccgg tggaaatgat
      601 gccgacgacc ttgccgtgtt ccagcaccgg caggtggcgc acgcggctgt cggtacacag
      661 gcgcatgcag tcgaacacgt cggtgtccgg ggtcaccgtg ggtgggttca cgcgcatgat
      721 gtcggcggtg ggggtctgcg ccgaggagcg gccctgcagg atcaccttgc gtgcgtagtc
      781 gcgctcggac accacgcccg ccagcacgcc accgcccatc accagcagcg caccgatgcg
      841 gtgctcggcc atcatcttga tcgcatccag caccggtgcc tcgggcgtga tggtatagac
      901 gctgcggttc ttgccttcga gcaactgcct gacttgacgc atgcctgaac ctccggttgc
      961 gcccgcgggt gagggcgttt cgagtctagc gcgtcgtttt ttgccaggtg ttgccccgtc
     1021 gtgaagccgg gacctcagcg cggcggccga tccggcgcat ggccttcgat gtagcctggg
     1081 ccgccaagct ggcgcatctg ccgctcgatc cagccggcac gccgcatgac gtacgcgctg
     1141 ggccgatcgg catgcagccg gcgcgggctg ggcagcacgg cggcgaggcg agcggcttgc
     1201 gccggcgtca accgcgccgg cgtggtgtgg aaatagatat tgctcgccgc accgacgccg
     1261 tagatcccgt cgcccagctc ggcaatgttc atgtatacct cgaggatgcg ccgcttcggc
     1321 caggtgaact cgagcagtac ggtgaaatac gcctccagcc ccttgcgcac gaagctgcgg
     1381 ccgttccaca ggaacaggtt cttcgccgtc tgctggctga tcgtgctggc gccgcgcagg
     1441 cgccggccgt cgtcggccgc atcgatcgcc tcgtggatgg agtcgaagtc gaagccgtgg
     1501 tgatacggaa acttctggtc ctcgccggcg accatcgcca gcggcgccca cggcgacact
     1561 tcgcgccacg gcacccagtg ctggcgcagg tgaaagccgt gctctccgcg cagcagcgcg
     1621 ccgacgcggc gctccaccat catcgccgac gtcggcggcg gcacgaagcg cagcacgacg
     1681 acgaccagtt cggtcagcac gacccacgac agtgcggcgt acgcgagcca gcgcagcagg
     1741 cggcggggtg acaacgggtg gggcatggcg gaacgatggc ggagaccggc agcagtatag
     1801 gtggcccatt gcgcatcggc gctgcgcccc catctcgcag ggattgctga cgaggcctgt
     1861 gccgtggaac aactgcccac cgacgacgtg ctgcaccgct ttctgctcga acgcgccggc
     1921 gtgcgcggcg cgctggtgcg cctgggcccg gcgtggcgcg agatcgctgg tcgtgcgggc
     1981 tatccgttgc cagtgcgcga cctgctcggc gaagcgctcg ccgcgagcgc cctgatgact
     2041 gcccacatca agctcgacgg cgagctctcg gtgcagctca agagcgacgg cgacctgcgt
     2101 ctgctgtttg ccgaatgctc cgaccgcggg cgcttgcgcg gcatcgcgcg ttggcacgat
     2161 ccggtgcccg cgtcactcgc gctg
//
LOCUS       DASSVL010000003         2212 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_918225, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000003 DASSVL010000000
VERSION     DASSVL010000003.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2212)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2212)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2212
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_918225"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..449)
                     /gene="msrA"
                     /locus_tag="VFM52_00035"
     CDS             complement(<1..449)
                     /gene="msrA"
                     /locus_tag="VFM52_00035"
                     /EC_number="1.8.4.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019398640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008113 - peptide-methionine (S)-S-oxide
                     reductase activity [Evidence IEA];
                     GO_function: GO:0033744 -
                     L-methionine:thioredoxin-disulfide S-oxidoreductase
                     activity [Evidence IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (S)-S-oxide reductase MsrA"
                     /protein_id="HET8763585.1"
                     /translation="MLGIGGWKQRMPRRAEALPGRSSVRVPHGVHAVLGGSLLPAEHP
                     GAACAWFGMGCFWGAERRFWSVPGVVATAAGYAGGYTPNPDYAEVCTGLTGHAEVVQV
                     VFDPARVTFDALLAVFWEGHDPTQGMRQSNDVGTQYRSLILAADAAQL"
     gene            complement(464..982)
                     /locus_tag="VFM52_00040"
     CDS             complement(464..982)
                     /locus_tag="VFM52_00040"
                     /EC_number="2.4.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008212894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003999 - adenine
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenine phosphoribosyltransferase"
                     /protein_id="HET8763586.1"
                     /translation="MTDWIERIRAVPDFPRPGVLFRDVTPLLADARGLAACVAALAEP
                     WRAARVGVVAGVEARGFIFGAALARELGAGFVPLRKPGKLPPPVESVEYALEYGHDRL
                     EAGRDAIAPGQRVLLVDDVLATGGTLVAARRLIERLHGVLVGAGVVIELPALGARARW
                     GTATPLQALVRY"
     gene            complement(991..1905)
                     /locus_tag="VFM52_00045"
     CDS             complement(991..1905)
                     /locus_tag="VFM52_00045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008212896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HET8763587.1"
                     /translation="MSASIATLHAAPAHAVWRMTLGAALLSTTGIFVAYTSVPATVSA
                     FYRMAFGGAMLLAWVALRGRWQVIGLRDLAWATLPALGFACDLFQWHRSILVVGPGVA
                     TLLTNFQVFLLALVGLLFYRERLGRWFAPGMLVAIGGLWLLVGADWSLFSAAYRAGVW
                     LGLGSCVAYAVYLLSFRHALSGHTALSPAQFLGLMSLESAVLLGLAGWLDGNSFGLHG
                     LVNWSALIGLGFFGQVLAWLLMVGAMPRLPASLVGLLLLLQPALAFVLDVLLFARRTS
                     VTDWLGLVLALVGILLGTLRPRAVRAAG"
     gene            complement(1914..2192)
                     /locus_tag="VFM52_00050"
     CDS             complement(1914..2192)
                     /locus_tag="VFM52_00050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007507276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2007 domain-containing protein"
                     /protein_id="HET8763588.1"
                     /translation="MRTVYRAENLVDAHLVKDALEHAEIPAFIAGEYLTGGVGQLPAL
                     DYLAVMVPDSAVPAAEDVVREVEAQLFEARAALRDADDAPDDPLPAPC"
BASE COUNT          398 a          875 c          701 g          238 t
ORIGIN      
        1 agttgcgcgg cgtcggccgc caggatcagc gagcggtact gggtaccgac gtcgttgctc
       61 tggcgcatgc cctgggtcgg gtcgtggcct tcccagaaca ccgcgagcaa ggcatcgaac
      121 gtcacccgcg ccgggtcgaa cacgacctgc accacttcgg catgcccggt gagaccggtg
      181 cacacctccg cataatccgg gttcggcgtg tagccaccgg cgtaacccgc cgccgtcgcc
      241 accacgccgg ggacgctcca gaacctgcgc tccgcgcccc agaagcagcc catgccgaac
      301 cacgcgcacg cggcaccggg gtgctccgcc ggcagcagcg atccgccgag caccgcgtgc
      361 acgccgtgcg gaacgcgcac ggacgaccgc cccggcagcg cttccgcgcg ccgcggcatg
      421 cgttgtttcc agccgccgat accgagcatg gcgttcacct ccctcagtag cgcaccagcg
      481 cctgcaacgg tgtcgccgtg ccccagcggg cacgtgcgcc aagcgccggc agttcgatca
      541 ccacgccggc gccgaccagc acgccgtgca ggcgttcgat caaccggcgt gccgccacca
      601 gcgtaccgcc ggtggcgagc acgtcgtcga ccagcagcac gcgctgcccg ggggcgatcg
      661 catcgcgccc cgcttccagg cggtcgtggc cgtattccag cgcgtattcg acactctcga
      721 ccggcggcgg cagcttgccc ggcttgcgca gcggcacgaa accggcgccc agctcgcgcg
      781 ccagcgccgc gccgaagata aagccgcgcg cctcgacgcc agccaccacc ccgacccgtg
      841 ccgcacgcca cggctccgcc aacgccgcga cgcatgccgc caggccccgc gcgtcggcca
      901 gcaacggcgt gacgtcgcga aacagcacgc cgggcctggg gaaatccggc accgcgcgta
      961 tgcgctcgat ccagtccgtc atcgccatcc tcatcccgcc gcgcgtaccg cgcgcggccg
     1021 caacgtgccc aacaggatgc cgaccagcgc cagcaccagg ccgagccagt cggtcacgct
     1081 ggtgcgccgc gcgaacagca gcacgtccag cacaaacgcc agcgccggct gcagcagcag
     1141 caacaggccg accagcgatg ccggcagccg cggcatcgca cccaccatca acagccacgc
     1201 cagcacctgc ccgaagaagc cgagcccgat gagcgcgctc cagttgacca ggccgtgcag
     1261 cccgaacgag ttgccgtcca gccacccggc cagtccaagc agcaccgcgc tttccaggct
     1321 catcaggccg aggaactgcg ccggcgacag cgcggtgtgg ccggacagcg catggcgaaa
     1381 gctcaacagg tataccgcgt acgcgacgca actgccgagc ccgagccaga cgcccgcgcg
     1441 atacgccgcg ctgaacagcg accagtcggc cccgaccagc agccacagcc cgccgatcgc
     1501 caccagcatg cccggcgcga accagcgtcc gagccgttcg cgatagaaca gcaagccgac
     1561 cagcgccagc aggaacacct ggaaattcgt cagcagcgtc gccacgccgg ggccgacgac
     1621 gaggatgctg cgatgccact ggaacaggtc gcacgcaaag ccgagcgcgg gcagcgtcgc
     1681 ccatgccagg tcacgcaggc cgatcacctg ccagcgcccg cgcagcgcca cccacgccag
     1741 cagcatcgcg ccgccgaatg ccatgcggta gaacgccgac accgttgccg gcacgctggt
     1801 gtacgcgacg aaaatgccgg tggtggacag cagcgccgcg cccagcgtca tccgccacac
     1861 agcgtgcgcg ggcgctgcgt gcagcgtcgc gatggaggcg gacaccggca gcctcagcag
     1921 ggcgccggca gcggatcgtc gggcgcgtcg tcggcatccc gcagcgccgc gcgcgcctcg
     1981 aacaactgcg cctcgacctc gcgtacgacg tcttccgccg ccggcacggc ggagtcgggc
     2041 accatcaccg caagataatc gagcgccggc aactggccga cgccgccggt gagatattcg
     2101 ccggcgatga acgccgggat ctcggcatgc tccagcgcat ccttcaccag gtgcgcatcc
     2161 accaggtttt ccgcgcgata gacggtacgc atgccgccac gctagcccca gc
//
LOCUS       DASSVL010000004         2983 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1002986,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000004 DASSVL010000000
VERSION     DASSVL010000004.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2983)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2983)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2983
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1002986"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..642)
                     /locus_tag="VFM52_00055"
     CDS             complement(<1..642)
                     /locus_tag="VFM52_00055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="2'-5' RNA ligase"
                     /protein_id="HET8763589.1"
                     /translation="MAMAAQACAARIVVEAQDMPAPPNPSRVADGVGYAFALLPDAGV
                     RARFAALGERLQRTHRVGGSLIAADALGLDLCPMGRPERLAGSAEQAMLAAGAAVASA
                     GFKLTFGSATRLRTHAAQFPLVLKADAAGTAAALELRKALAAAQAAVGLQVIAVAGFS
                     AYVALMKGDTVNAAEELIDPIDWTVREFVLIRHFFGGLRHEVIARWPLATAADT"
     gene            752..2521
                     /locus_tag="VFM52_00060"
     CDS             752..2521
                     /locus_tag="VFM52_00060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007509260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HET8763590.1"
                     /translation="MSLPPSDPSTVPAPAGGESIAKQLFLGNILEESLFPYPAIRARD
                     RELLGAMTDAIDEFLASKHAELAHYDRIAEQPAEFIQALRDMGLFGLIIPEEFGGMDL
                     SNGAYARVLAQTSSHDSSVSLTIGAHSSIGMKGLLLFGTDEQKQRYLPRLASGEMIAA
                     FCLTEAGAGSDAASIRTKATRNADGSWTLAGEKIWITNGGIADFYTVFARTDTPEGKI
                     TAFLVEAKWPGVSHGPHEDKMGIRASSTTTVAFADVRVPPENVLGPVGKGFKVAMSIL
                     NSGRTGLGGGAVGGMRTLIKLACAQARERKQFGKPIAEFGLVRAKIARMTLDCFAAES
                     VVWMVAHLIDSGATDYSVEAAMSKVFASAAVQRCAYEALQIAAGNGFMRDLPYEQITR
                     DTRILSIFEGTNEILHLYIALSGLKGVGTGLSELRAAVGDIFNDPIKGFGVLGGYTGK
                     RLREATGYGIDRIARELSPRLRTAASIYEKYTVELSKASDQLLRRYGKRIADQQHAQA
                     RLADIAIDLFVGLCVLSRADSLERAGHAGAAEAVLLAETFAREARRRMARNVRGLDRN
                     EDAAIERLAGAVLDHGGYPWDVI"
     gene            2542..2949
                     /locus_tag="VFM52_00065"
     CDS             2542..2949
                     /locus_tag="VFM52_00065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017157198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OsmC family protein"
                     /protein_id="HET8763591.1"
                     /translation="MTTPVVRAQTGTQPWAVTFSDDQGNTWSADEPTEEGGANTGPAP
                     HRLLLSALGACTAITLQMYAARKGWALRHVGVELAFNPDGTPKEGNDITRVITLEGDL
                     DTEQRERLLQIANKCPIHRVLTGEVRIASRLAA"
BASE COUNT          485 a         1034 c         1057 g          407 t
ORIGIN      
        1 ggtgtccgcc gcagtggcaa gcggccagcg ggcaatgacc tcgtggcgca gcccgccgaa
       61 gaaatggcgg atcagcacga attcgcgcac cgtccagtcg atcgggtcga tcagctcttc
      121 cgcggcgttc acggtgtcgc ccttcatcag cgcaacgtag gccgaaaacc cggcgaccgc
      181 gatcacctgc aagccgacgg cggcctgggc cgccgccagc gccttgcgca gttcgagcgc
      241 ggcagcagtg ccggctgcat cggccttgag caccagcggg aactgggccg cgtgcgtgcg
      301 cagccgggtc gccgagccga aggtcagctt gaacccggcc gacgcgaccg cggcgccggc
      361 ggcgagcatg gcctgctccg ccgagcctgc gaggcgttcg gggcgtccca tcgggcacag
      421 gtccaggccc aacgcgtccg ccgcgatcag gctgccgccg acccggtggg tgcgctgcag
      481 gcgttcgccg agggcggcga atcgggcgcg tacgccggca tccggcaaca atgcgaaggc
      541 gtagccgaca ccgtcggcga cacggctggg gttcggcggg gcgggcatat cctgggcctc
      601 cacgacgatg cgggcggcgc acgcttgcgc cgccatggcc aagcttgccg tggcgtggcg
      661 gctgcggcaa gtaggcgcgg ccacggcccg cggcgcgggc ttcacggttg gagatgccag
      721 aatgcggctt tcccgtcgtg gagcgtgcat catgagcctg ccgccttccg atccgtccac
      781 cgtgcctgca ccggccggcg gcgagagcat cgccaagcag ctgttcctcg gcaatatcct
      841 cgaggaaagc ctgttcccgt acccggcgat ccgcgcgcgc gaccgcgagc tgcttggcgc
      901 gatgaccgac gccatcgacg agttcctcgc cagcaagcac gccgagctgg cgcactacga
      961 ccgcatcgcc gagcagccgg ccgagttcat ccaggcgctg cgcgacatgg gcctgttcgg
     1021 gctgatcatt cccgaggagt tcggcggcat ggacctgtcc aacggcgcct acgcgcgcgt
     1081 gctggcgcag accagcagcc acgacagttc ggtgtcgctc accatcggcg cgcacagctc
     1141 gatcggcatg aagggattgc tgctgttcgg caccgacgag cagaagcagc gctacctgcc
     1201 gcgcctggcg agcggcgaga tgattgccgc gttctgcctg accgaggccg gcgccggctc
     1261 cgatgcggcg tcgatccgca ccaaggccac acgcaacgcc gacggcagct ggacgctggc
     1321 cggggaaaag atctggatca ccaacggcgg catcgcggat ttctacaccg tgttcgcgcg
     1381 caccgacacg ccggaaggca agatcaccgc gttcctggtc gaggcgaagt ggccgggcgt
     1441 gagccacggt ccgcacgagg acaagatggg catccgcgcc tcgtccacca ccacggtcgc
     1501 gtttgccgac gtgcgcgtgc cgccggaaaa cgtgctcggc ccggtgggca agggcttcaa
     1561 ggtggcgatg agcatcctga attccggccg caccggcctg ggcggcggcg cggtgggcgg
     1621 catgcgcacg ctgatcaagc tggcctgtgc gcaggccagg gagcgcaagc agttcggcaa
     1681 gccgatcgcg gaattcggcc tggtgcgcgc caagatcgcg cggatgacgc tggactgctt
     1741 cgcggccgaa agcgtggtgt ggatggtcgc ccacctgatc gactcgggcg cgaccgacta
     1801 ctcggtcgag gcggcgatga gcaaggtgtt cgccagcgcc gccgtgcagc gctgcgccta
     1861 cgaggccctg cagatcgccg ccggcaacgg cttcatgcgc gacctgccgt acgagcagat
     1921 cacgcgcgac acgcgcatcc tgtcgatctt cgagggcacc aacgagatcc tgcacctgta
     1981 catcgcgctg tcgggcctga agggcgtcgg caccggcctc agcgaactgc gcgctgcggt
     2041 gggcgacatc ttcaacgacc cgatcaaggg cttcggggtg ctcggcggct acaccggcaa
     2101 gcggctgcgc gaggcgaccg gctacggcat cgaccgcatt gcgcgcgagc tgtcgccgcg
     2161 cctgcgcacg gccgccagca tctacgagaa atacaccgtc gagctgtcca aggcgtccga
     2221 ccagctcctg cgccgctacg gcaagcgcat tgccgaccag cagcacgcgc aggcgcggct
     2281 ggccgacatc gcgatcgatc tgttcgtcgg cctgtgcgtg ctgtcccgtg ccgacagcct
     2341 tgaacgcgcc ggccacgcgg gcgcggccga agccgtgctg ctggccgaga cctttgcccg
     2401 cgaggcgcgc cggcgcatgg cgcgcaacgt gcgcggcctg gaccgcaacg aggacgccgc
     2461 gatcgagcgg ctggccggtg ccgtgctcga ccacggtggt tacccgtggg atgtcatctg
     2521 aatcggaaag ggagaagaac catgaccaca cccgttgtgc gcgcgcagac cggcacccag
     2581 ccgtgggcgg tcaccttcag cgacgaccag ggcaatacct ggagcgccga cgagccgacg
     2641 gaggagggcg gtgcgaacac cgggccggcg ccgcaccggc tgctgctgtc cgcgctcggc
     2701 gcgtgcaccg cgatcacgct gcagatgtac gcggcgcgca agggctgggc gctgcgccat
     2761 gtcggggtgg aactcgcatt caaccccgat ggcacgccga aggaaggcaa cgacatcacg
     2821 cgcgtgatca cgctggaggg cgatctcgat accgagcagc gcgagcgcct gttgcagatc
     2881 gcgaacaaat gcccgatcca ccgcgtgctg accggcgagg tacgtatcgc ctcgcgcctc
     2941 gcggcgtgac ggcggcgcgc ccggcatcgc gccgggcgcg ccg
//
LOCUS       DASSVL010000005         2214 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1073602,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000005 DASSVL010000000
VERSION     DASSVL010000005.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2214)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2214)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2214
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1073602"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1495)
                     /gene="mnmG"
                     /locus_tag="VFM52_00070"
     CDS             complement(<1..1495)
                     /gene="mnmG"
                     /locus_tag="VFM52_00070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007513546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0002098 - tRNA wobble uridine modification
                     [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis enzyme MnmG"
                     /protein_id="HET8763592.1"
                     /translation="MRHPTHYDVIVIGGGHAGTEAALAAARTGARTLLLSHNIETIGQ
                     MSCNPAIGGIGKGHLVKEIDALGGAMAHAADRAGIQWRTLNASKGPAVRATRCQADRA
                     LYKAAIRRMVETQPNLELFQQAVDDLVIEGGRVRGVVTQMGLTFAARAVVLTAGTFLA
                     GKIHIGQAQYAGGRAGDPPASTLAQKLRELPVAADRLKTGTPPRIDRRSIDFSDLEEQ
                     PGDAPTPVFSYLGARDEHPRQVSCWITHTSERTHEIIRGALDRSPLYTGQIEGIGPRY
                     CPSIEDKVVRFAEKSSHQIFIEPEGLDTFEIYPNGISTSLPYDVQLALVQSIPGFEQA
                     HITRPGYAIEYDYFDPRGLHPWLETKTIPGLYFAGQINGTTGYEEAAAQGLIAGLNAA
                     LAVQGKAPWYPRRDEAYIGVLIDDLTSNGTIEPYRMFTSRAEYRLHLREDNADLRLTD
                     QGFALGVVPPARYDALRAKREAVERETQRLGALWAAPTNALGAAIERQ"
BASE COUNT          328 a          711 c          805 g          370 t
ORIGIN      
        1 gctggcgttc gatcgccgca cccagggcgt tggtcggcgc cgcccacagc gcgccgaggc
       61 gctgcgtctc gcgctccacc gcctcgcgct tggcgcgcag cgcgtcgtag cgcgccggcg
      121 gcaccacgcc gagcgcgaaa ccttggtcgg tgaggcgcag gtcggcgttg tcctcgcgca
      181 ggtgcaggcg gtattcggcg cgcgaggtga acatgcggta cggctcgatg gtgccgttgc
      241 tggtgaggtc gtcgatcagc acgccgatgt aggcctcgtc gcggcgcgga taccacggcg
      301 ccttgccttg caccgcgagc gcggcgttca ggccggcgat caggccttgc gcggcggctt
      361 cctcgtagcc ggtggtgccg ttgatctggc cggcgaaata caggccgggg atcgtcttgg
      421 tctccagcca cgggtgcagg ccgcgcgggt cgaagtagtc gtactcgatc gcgtagccgg
      481 ggcgggtgat gtgcgcctgc tcgaagccgg gaatcgactg caccagcgcc agctgcacgt
      541 cgtacggcag cgaggtggag atgccgttcg gatagatctc gaaggtgtcc agtccttccg
      601 gctcgatgaa gatctggtgc gaggacttct ccgcgaagcg caccaccttg tcctcgatcg
      661 acggacagta gcgcgggccg atgccctcga tctggccggt gtacagcggc gagcgatcca
      721 gcgcgccgcg gatgatctcg tgggtgcgct cgctggtatg ggtgatccag cagctgacct
      781 gccgcgggtg ctcgtcgcgc gcgccgaggt aggagaacac cggtgtcggc gcgtcgccgg
      841 gctgctcttc aagatcgctg aagtcgatgc tgcgccggtc gatgcgcggc ggcgtgccgg
      901 tcttcaggcg gtcggcggcg accggcagct cgcgcagctt ttgcgccagc gtgctggccg
      961 gcgggtcacc ggcgcggcca ccggcgtact gcgcctggcc gatgtggatc ttgccggcga
     1021 ggaaggtgcc ggcggtgagc accaccgcgc gcgcggcaaa ggtgagcccc atctgggtaa
     1081 ccacgccgcg gacgcggccg ccttcgatga cgaggtcgtc caccgcctgc tggaacagct
     1141 ccaggttcgg ctgggtttcc accatgcgcc ggatcgccgc cttgtacagc gcgcggtcgg
     1201 cctggcagcg ggtggcgcgc acggccggcc ccttcgacgc gttcagcgtg cgccactgga
     1261 taccggcgcg gtcggccgcg tgcgccatcg cgccgccgag cgcgtcgatc tccttcacca
     1321 ggtggccctt gccgatgccg ccgatcgccg ggttgcagct catctggccg atcgtctcga
     1381 tgttgtggct gagcagcagc gtgcgcgcgc cggtgcgcgc ggcggccagc gcggcctcgg
     1441 tgccggcgtg gccgccgccg atcacgatga cgtcatagtg ggtcgggtgg cgcatggaac
     1501 tgacctgagc gtgcagaaag tgacgaaacg gggcgccatg gtagcgccat caatgctttg
     1561 ggcgccgcgc agggtgactg gcacgcttcc tgcttcgagg agacctgcac tttcacgggc
     1621 agacgctgcg cgagccacgc gcgccgaggt cggacggaca ggggttcgat cgcgtaccag
     1681 gaaaggaagc aagacggcac ctctcggggt gccgtcgtct tttccgcggc cgcaggagcc
     1741 gcaaagacga agccccgcgg cgctagccgc ggggcttcgt gctgttagat ctggcgcccg
     1801 gcggtctcag gaacaggggg aatccaggat gaccgtgttg ccgagcgcca gaaaccggaa
     1861 atctgctggc gccgcccatg gcggctgccg tggaacgtgg ggcgatattc gccgcaaacg
     1921 cgtgaacacg gggtgactga aatgaagttt tgtgccggat cgcggcagca gatgacgtgt
     1981 tgcgtcagtc gtgtgattgc ctgcccgatt cccccgtgat ccagctcaca catggcatgg
     2041 cggttgcatc acccgacgta cccacccact cagggaagca atggacatga gcttcgactt
     2101 ccaaccggtt tatccgcacc acgacctgct ggtcgagatc ggccaggtcg agatggccat
     2161 cgatggattg agcgagcgcg acgacagcga gcgcgtggtc ctgcagccga cgct
//
LOCUS       DASSVL010000006         2193 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_240206, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000006 DASSVL010000000
VERSION     DASSVL010000006.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2193)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2193)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2193
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_240206"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..560
                     /locus_tag="VFM52_00075"
     CDS             <1..560
                     /locus_tag="VFM52_00075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008438962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="outer membrane protein transport protein"
                     /protein_id="HET8763593.1"
                     /translation="KLAMSRFERYAGLFAGRDGFDIPQNYSVGVAFRPAAPWTLALDW
                     QRINYAGVASVGNPSLRRAQLGAANGPGFGWHDVTVWKLGIDYAATDRLTLRAGFNHS
                     DNPIRASDVTFNILAPGVVTNHLTLGASWRTQGGEVSVAWMHAFEHAVTGTSILPAFM
                     GGAPAGSETIRMHEDSLGVAWTWRL"
     gene            complement(568..1230)
                     /locus_tag="VFM52_00080"
     CDS             complement(568..1230)
                     /locus_tag="VFM52_00080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008211397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin III family protein"
                     /protein_id="HET8763594.1"
                     /translation="MPTATLALPRYHRGDELASSVLHGIGIVLSIGGLATLVAFAALH
                     GGARAVTASAVYGATLVLLYTASTLYHAIPLMRAKPVLRTLDHMAIYLLIAGTYTPFT
                     LMALSGAWRWGLFAAVWTLAVIGGVLELGWFRRYRYLAVLLYVGMGWIGMLAFKPLAA
                     ELQAGGMTLLIAGGLAYTLGVPFYLWRRLPFQHALWHAFVLAGSVLHYFAVLLYVLPS
                     AG"
     gene            1555..2127
                     /locus_tag="VFM52_00085"
     CDS             1555..2127
                     /locus_tag="VFM52_00085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine dioxygenase"
                     /protein_id="HET8763595.1"
                     /translation="MGHRLHGLKTLRDIVLEYGAAEHPDLAAMARELGSIVHRNGAAI
                     ALRLNTLQRHRGHADHWLITRQRQPALRMWVKAWPAGEPAPLCGHANGWELELALHGA
                     LELETWHRHPATGVLAAHGRDWLGPGDARWFERDAGLVHRCRNLSRRETAFTLHVCCA
                     ARGSCYHDEPGNDVPAWLRSGMAGEHRLAS"
BASE COUNT          363 a          801 c          741 g          288 t
ORIGIN      
        1 gcaagctcgc gatgagccgc ttcgagcgct acgcaggcct gtttgccggg cgtgacggct
       61 tcgacatccc gcagaactac tcggtgggcg tcgcgttccg cccggccgcg ccgtggacgc
      121 tggcgctcga ctggcaacgc atcaactacg cgggagtggc gtcggtcggc aaccccagcc
      181 tgcgccgcgc gcagctcggt gcggcgaacg gccccggttt cggctggcac gacgtcaccg
      241 tgtggaagct cggcatcgac tacgccgcca ccgaccgcct cacgctgcgc gccggcttca
      301 accacagcga caacccgatc cgcgccagcg acgtgacgtt caacatcctc gcgcccggcg
      361 tcgtcaccaa ccatctcacg ctcggcgcga gctggcgcac gcagggcggc gaggtgtcag
      421 tggcctggat gcacgccttc gagcacgcgg tgaccggcac ctcgatcctg cccgccttca
      481 tgggcggcgc acccgccggc agcgagacca tccgcatgca cgaggactcg ctcggcgtgg
      541 cctggacgtg gcggctgtga gggcggctca ccccgccgac ggcagcacgt acagcagcac
      601 cgcgaagtag tgcagcacgc tgccggcaag cacgaaggca tgccacagcg cgtgctggaa
      661 cggcaggcgg cgccacaggt agaacggcac gcccagggtg taggcgagcc caccggcgat
      721 cagcagcgtc atgccgccgg cctgcaactc ggcagccagc ggcttgaagg cgagcatgcc
      781 gatccagccc atgccgacgt acagcagcac cgcaaggtag cggtagcggc ggaaccagcc
      841 gagctccagc acgccgccaa tcaccgccag cgtccacacc gcggcgaaca agccccagcg
      901 ccaggcgccg gacagcgcca tcagcgtgaa cggcgtgtag gtgccggcga tcagcaggta
      961 gatcgccatg tggtcgagcg tgcgcagcac cggcttggcg cgcatcagcg gaatcgcgtg
     1021 atacagcgtg gaggcggtgt acagcaggac cagcgtggcg ccatacaccg cgctggcggt
     1081 caccgcgcgg gcgccgccgt gcagcgcggc aaacgcgacc agcgtggcca gcccgccgat
     1141 gctgagcacg atgccgatgc cgtgcagcac gctgctggcg agttcgtcac cacggtgata
     1201 acgcggcagg gcaagcgtgg cggtaggcat ggtcgttcca gccaacgggc ggcaagacgt
     1261 cgaaccgaca ccataccgga gcgaacggca ccccgccagc gcatgcgtca gggcgttgcc
     1321 gaagcggccg gtgtacgccg accgccccat cgcagcgtgg cgtgaacgcc ggttcaccgt
     1381 acctgcacgc ggcgtcgatg aataccgtcg gacactaggc gtgcgggtgc ctcccattcc
     1441 ccgacatccg cgttccgccc cacttccccg tggggctttt ttttggcctg cgcttacggt
     1501 ggtttaacga tgcgcatggt ccactgcggc gacgaatcga cagcggagca ccccatgggc
     1561 catcgcttgc acgggctgaa gacactgcgc gacatcgtgc tcgaatacgg cgcggccgag
     1621 caccccgacc tcgcggcgat ggcgcgcgaa ctcggcagca tcgtgcaccg caatggcgcc
     1681 gccatcgcgc tgcgcctcaa taccctgcaa cgtcatcgcg gccatgccga ccattggctc
     1741 atcacccgcc agcgccaacc ggcgttgcgc atgtgggtga aggcctggcc ggccggtgag
     1801 cccgcgccgc tgtgcgggca cgccaacggc tgggaactgg agctcgccct gcacggcgca
     1861 ctggagctgg aaacctggca ccggcatccg gccaccggcg tgctcgccgc gcatggccgc
     1921 gactggctcg gccccggcga cgcccgctgg ttcgagcgcg atgcgggact ggtgcaccgc
     1981 tgccgcaacc tgtcgcgccg ggagaccgcc ttcaccctgc atgtgtgctg cgccgcgcgc
     2041 ggcagttgct accacgacga gcccggcaac gacgtgccgg cctggctgcg gtcaggcatg
     2101 gccggcgaac accgcctggc ttcctgatcc ccgcctcgcg gacagcgcgc cgatgcatcg
     2161 acggatcgcc atcatcggcg gcggcgccgc cgc
//
LOCUS       DASSVL010000007         2070 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1172498,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000007 DASSVL010000000
VERSION     DASSVL010000007.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2070)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2070)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2070
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1172498"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..730
                     /locus_tag="VFM52_00090"
     CDS             <1..730
                     /locus_tag="VFM52_00090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019465561.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008703 -
                     5-amino-6-(5-phosphoribosylamino)uracil reductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="dihydrofolate reductase family protein"
                     /protein_id="HET8763596.1"
                     /translation="GRPTSDTTPGGAEMGKVRFTQTMSLDGYTAGPGQTREEPLGKGG
                     EELHEWMLHTRTFYEMTGKEGGTTGLDDEQMRRWNENIGAHIMGRNMFGPVRGEWGDE
                     DWRGWWGDDPPYHAPTFVLTHHPRASIPMAGGTTFHFVTEGIEAALEQARAAAGNLDV
                     KIGGGVSTVRQYLQAGLVDELHFAISPVVLGRGEAMFAGLDLPALGFHVVDHVATAAA
                     THVTLARQAAIGRAGKQRATCAPR"
     gene            complement(711..>2070)
                     /locus_tag="VFM52_00095"
     CDS             complement(711..>2070)
                     /locus_tag="VFM52_00095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009573145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="peptidase M61"
                     /protein_id="HET8763597.1"
                     /translation="ASQSGAITTFKPVTYNNLVDSPMYAGRYFKRVQLSADGGVPVHL
                     DVVADAPKYLAMTPEQVKAHQALVAQALKLFGSQHYDHYDFLFSLSDVLAGNGLEHHQ
                     SSEDGMGADYFTAWATNAPNRDLLAHEYVHSWNGKFRRPADLWTPNFNVPMGDSLLWV
                     YEGQTQYWGFVLTARSGLWTPEQFRDALAMVAANYQLNRPGFQWRTLEDTTNDPTAAH
                     REALPYRSWQMSEDYYSGGQMLWLAVDAKLRRLSGDKKSLDDFAKGFFGVDNGSYVTR
                     TYTFDDVVAALNAVAPFDWAGFLQARADALNPPLLSGLADTGWKLVYTDTPSAYEKAY
                     DARPESSRHIFNFAWSIGLTLTKDGEVNDVRWNGPAFKAGVSTGATVVAVNGQAYSSD
                     GLKEAIAAAKGGSAPIQLLLKYQGNLQTVPVDYHEGLKYPHLERIAGAPDYLDQIIAA
                     RK"
BASE COUNT          327 a          690 c          719 g          334 t
ORIGIN      
        1 gggtcgtcct acctccgaca cgacgccggg aggtgcagag atggggaagg tccggttcac
       61 gcagacgatg tcgctcgacg gctacaccgc cggtcccggg cagacccgcg aggagccgct
      121 cgggaagggc ggcgaggagc tgcacgagtg gatgctccac acgcggacgt tctacgagat
      181 gaccggaaag gagggcggca cgacggggct cgacgacgag cagatgcgcc ggtggaacga
      241 gaacatcggc gcccacatca tggggcgcaa catgttcggg cccgtgcgcg gcgagtgggg
      301 cgacgaggac tggcgcggct ggtggggcga cgacccgccg taccacgcgc ccaccttcgt
      361 gctcacccac catccgcgcg catcgatccc gatggcgggc ggcaccactt tccacttcgt
      421 caccgaaggc atcgaggcgg cactcgaaca ggcgcgcgcc gcggccggca acctggacgt
      481 gaagatcggc ggcggcgtga gcacggtgcg ccagtacctg caggccggcc tggtggacga
      541 gctgcatttc gcgatctccc cggtggtgct cggccgcggc gaggccatgt tcgcggggct
      601 ggatctgccg gcactgggct tccacgtggt cgaccacgtg gccaccgccg cagccaccca
      661 cgtgacgctc gcccgacagg ccgctatcgg gcgagccggc aaacagcgcg ctacttgcgc
      721 gccgcgatga tctggtcgag atagtccggc gcgccggcga tgcgctccag gtgcgggtat
      781 ttgaggccct cgtggtagtc caccggcacg gtctgcaggt tgccctggta cttcagcagc
      841 aactggatcg gcgcgctgcc gcccttggcg gcggcgatcg cctccttcag cccgtcgctc
      901 gaatatgcct gcccgttcac cgccaccacg gtggcgccgg tgctgacgcc cgccttgaag
      961 gcagggccgt tccagcgcac gtcgttgacc tcgccgtcct tggtgagcgt gagcccgatc
     1021 gaccacgcga agttgaagat gtgccgcgac gattcgggcc gcgcgtcgta cgccttctcg
     1081 taggcactcg gcgtgtcggt atagaccagc ttccagccgg tgtcggcgag gccgctcagc
     1141 agcggcgggt tcaaggcgtc ggcgcgcgcc tggaggaacc cggcccagtc gaacggcgca
     1201 acggcgttga gcgcggcgac gacgtcgtcg aacgtgtagg tcctggtgac gtagctgccg
     1261 ttgtcgacac cgaagaagcc cttggcgaag tcatcgagcg acttcttgtc gccgctgagc
     1321 cggcgcagct tcgcgtccac cgccagccac agcatctggc cgccggagta gtagtcctcg
     1381 ctcatctgcc agctgcggta cggcagcgcc tcgcgatgtg cggcggtagg gtcgttggtg
     1441 gtgtcttcca gcgtgcgcca ctggaagccg ggccggttca gctgatagtt ggcggcgacc
     1501 atcgccagcg cgtcgcggaa ttgttccggc gtccacaggc cggagcgcgc ggtgagcacg
     1561 aagccccagt actgggtctg cccctcgtac acccacaaca gcgagtcgcc catcggcaca
     1621 ttgaagttcg gcgtccacag atccgccgga cggcggaact tgccgttcca cgaatgcacg
     1681 tattcgtgcg ccagcaggtc gcggttcggc gcgttggttg cccacgcggt gaagtagtcc
     1741 gcgcccatgc cgtcctcgct cgactgatgg tgttcgaggc cgttgccggc cagcacgtcg
     1801 gacagcgaga acaggaagtc gtagtggtcg taatgctgcg aaccgaacag cttcagcgcc
     1861 tgcgccacca gcgcctggtg cgccttcacc tgctccggcg tcatcgccag gtatttcggt
     1921 gcgtcggcca ccacgtccag gtgcaccggc acgccgccgt cggcactgag ctgcacgcgc
     1981 ttgaagtagc gcccggcgta catcggcgaa tcgaccaggt tgttgtaggt gaccggcttg
     2041 aacgtggtga tggcgcccga ctgcgaagcc
//
LOCUS       DASSVL010000008         2150 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_282606, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000008 DASSVL010000000
VERSION     DASSVL010000008.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2150)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2150)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2150
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_282606"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..967)
                     /locus_tag="VFM52_00100"
     CDS             complement(<1..967)
                     /locus_tag="VFM52_00100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009607664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate/molybdate ABC transporter ATP-binding
                     protein"
                     /protein_id="HET8763598.1"
                     /translation="MTLELSHLTRRFTGYPALDDVSLEIPPGEFLALLGPSGSGKTTL
                     LRILAGLDYPESGSVRREGRDLLALDARRRKVGLVFQHYPLFRHLTVAENVAFGLRVR
                     PWRTRPKRADIAARVERLLQRVQLQDMAKRYPAQLSGGQRQRIALARALAVEPDLLLL
                     DEPFGALDAQVRVSLRRWLRELHDEFGLTTVFVTHDQEEALELADRVVVMSQGRIEQV
                     GTADDIYDTPNSPFVYSFIGESSSLPVKVENGEVWIADRPIGLQAPHAPPGEAVLHFR
                     PHDVDLLDGCSGCIAGTVAASRRVAGTRRVELEIGGERQRVEIELP"
     gene            complement(978..1841)
                     /gene="cysW"
                     /locus_tag="VFM52_00105"
     CDS             complement(978..1841)
                     /gene="cysW"
                     /locus_tag="VFM52_00105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019466648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015419 - ABC-type sulfate transporter
                     activity [Evidence IEA];
                     GO_process: GO:0008272 - sulfate transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate ABC transporter permease subunit CysW"
                     /protein_id="HET8763599.1"
                     /translation="MNAVVLPRTSIRPRRLQRALLILVAMTFMLVFLLLPLAVVFTEA
                     LAKGVQTFVAALTQPEAWSSIRLTLLVAAIVVPMNIVFGIAAAWAMARFEFRGKALLG
                     ALIDLPFSVSPVIAGLIYVLLFGAQGWFGPWLDAHGVRIIFAVPGLVLASVFVTLPFV
                     ARELIPLMQAQGGEDEEAARVLGANGWQMFFRVTLPNIRWALLYGVLLCNARAMGEFG
                     AVSVVSGHIRGLTTTMPLEVEMRYNEYDYAGAFAVASLLALLALLTLAIKTLLEWRYG
                     DDLAAHAPGGR"
     gene            complement(1838..>2150)
                     /locus_tag="VFM52_00110"
     CDS             complement(1838..>2150)
                     /locus_tag="VFM52_00110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019466649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HET8763600.1"
                     /translation="SLGARRSQVFARVILPVLVPALLTGFALALARAVGEYGSVIFIA
                     GNLPMRTEIAPLLIVQKLEQFDYAGAAALGVVMLGFSFVMLVALSLLQRWSRRWAETS
                     P"
BASE COUNT          429 a          751 c          685 g          285 t
ORIGIN      
        1 ccggcagctc gatctcgacg cgctgccgct cgccgccgat ctccagctcg acgcgccttg
       61 tgcctgcgac gcggcggctg gcggcgaccg tgccggcgat gcagccgctg cagccgtcga
      121 gcaggtcgac gtcatgaggg cggaagtgga gaaccgcttc gccgggcggc gcatgcggcg
      181 cctgcaggcc gatcggccgg tcagcgatcc agacctcgcc attctcgacc ttgaccggca
      241 gcgagctcga ctcgccgatg aaggagtaga cgaagggcga gttcggcgtg tcataaatgt
      301 cgtcagcagt gccgacctgc tcgatgcggc cctggctcat caccacgacg cggtcggcca
      361 gttccagtgc ctcttcctga tcgtgggtga cgaacaccgt ggtcaggccg aactcatcgt
      421 gcagctcgcg cagccagcgg cgcaagctca cgcgcacctg cgcgtcgagc gcgccgaagg
      481 gttcgtcgag caacaacaaa tccggctcga ccgccagcgc acgcgccagc gcgatccgct
      541 ggcgctggcc accggaaagc tgcgccggat aacgcttggc catgtcctgc aattgcacgc
      601 gctgcagcag gcgctcgacg cgcgccgcga tgtcggcgcg cttcgggcgc gtgcgccacg
      661 gccgcacccg caatccgaag gcaacgtttt cggcgacggt caggtggcgg aacaaggggt
      721 aatgctggaa caccagcccc actttgcgac gccgggcatc gagcgccagc aggtcgcggc
      781 cttcccggcg cacgctgccg gattcggggt aatcgagacc cgcgaggatg cgcaacaggg
      841 tggtcttgcc ggaaccagac ggtccgagca gcgcgaggaa ttcaccgggc ggaatttcca
      901 ggctgacatc atccagcgcc ggataacccg tgaagcgacg ggtgagatgc gaaagttcga
      961 gcgtcatgcg cgcatcctca tcgcccgccc ggcgcatgcg cggcgaggtc gtcgccgtag
     1021 cgccattcga gcaatgtctt gatcgccagc gtcagcaaag cgagcaacgc caacagcgag
     1081 gccacggcga acgcgccggc gtagtcgtat tcgttgtagc gcatctccac ctccagcggc
     1141 atcgtggtgg tgagcccgcg aatgtggccg gacaccaccg ataccgcgcc gaattcgccc
     1201 atcgcacggg cgttgcacaa cagcacgccg tacagcaacg cccaacgaat gttcggcagc
     1261 gtcacgcgga agaacatctg ccaaccattg gcaccgagca cccgcgccgc ttcctcgtcc
     1321 tcaccgccct gcgcctgcat cagcgggatt agttcgcgcg cgacgaatgg cagcgtgacg
     1381 aacaccgacg ccaacaccag gccgggcacg gcgaatatga tccggacgcc gtgcgcgtcc
     1441 agccaaggcc cgaaccaccc ctgcgcgccg aacagcagca cgtaaatcaa gcccgcgatc
     1501 accggcgata ccgaaaaggg caagtcgatc agcgcgccga gcagagcctt gccgcggaac
     1561 tcgaaacgcg ccatggccca ggccgcggcg atgccgaaca cgatgttcat cggcaccacg
     1621 atcgcggcaa ccagcagggt caggcggatc gacgaccatg cctcgggctg cgtgagcgcc
     1681 gccacgaacg tttgcacacc cttggcaagt gcttcggtga acaccaccgc cagcggcaac
     1741 agcaggaaca ccagcatgaa tgtcatggca acgaggatca gcagcgcgcg ctgcagccgc
     1801 cgcggccgga tcgaggtgcg tggcaggacc acggcattca tggcgaggtc tccgcccaac
     1861 gccggctcca gcgctgcagc agcgacagtg ccaccagcat cacgaaggag aagcccagca
     1921 tcaccacgcc cagagccgcc gcgcccgcgt aatcgaactg ttccagtttc tgcacgatca
     1981 agagcggcgc gatctccgtg cgcatcggca ggttgccggc gatgaagatc accgaaccgt
     2041 actcgcccac cgcgcgcgcc agcgccaacg caaaaccggt gagcaacgcc ggaaccagta
     2101 ccggcaggat cacgcgggcg aagacttgtg aacgacgcgc gcccaggctc
//
LOCUS       DASSVL010000009         6298 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1031259,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000009 DASSVL010000000
VERSION     DASSVL010000009.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 6298)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6298)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6298
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1031259"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..720
                     /gene="nagZ"
                     /locus_tag="VFM52_00115"
     CDS             <1..720
                     /gene="nagZ"
                     /locus_tag="VFM52_00115"
                     /EC_number="3.2.1.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007511300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-N-acetylhexosaminidase"
                     /protein_id="HET8763601.1"
                     /translation="HRPTLLVDGNQIVVATDLADRRAQCHELVAIGVRAFHADPAITA
                     DLTAAYVRGMHLAGMAAVLKHFPGHGSVAADTHKAQAVDARPLDVIRRDDLRPFAEGI
                     AAHVEAVMLAHVIYPAVDAEPAGYSRVWIERILRGELGFAGIAISDDISMAAAGVAGS
                     VAGRVRGHLDAGCDLVLACFPDVVDEAIAAVAGRPAIAPERLAALRGTVAATWAGLLD
                     NPQRDRFVARITALGADQDPA"
     gene            717..1274
                     /locus_tag="VFM52_00120"
     CDS             717..1274
                     /locus_tag="VFM52_00120"
                     /EC_number="2.4.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007082715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hypoxanthine-guanine phosphoribosyltransferase"
                     /protein_id="HET8763602.1"
                     /translation="MNQPVPGLQDALAHSEVLHSRAEIEAVIADIGRRIDAELHGERA
                     VFLTVMNGALMFAGHLALAIRTDLEFDYVHATRYHGDTRGSALHWLREPVADLRGRTV
                     LLVDDILDEGNTLKAVRDECLRRGARRALIVSLCTKDHDRLVPGIHADFNGIVLPDRY
                     VFGYGMDYHEQGRNLPDIYALKDAE"
     gene            1300..2058
                     /locus_tag="VFM52_00125"
     CDS             1300..2058
                     /locus_tag="VFM52_00125"
                     /EC_number="2.4.2.44"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019465944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-methyl-5'-thioinosine phosphorylase"
                     /protein_id="HET8763603.1"
                     /translation="MNDGAGQIDLGVIGGSGLYALPGLANAVRETVATPWGAPSGDVV
                     VGELAGKRVAFLARHGERHDLPPHRVNYRANLWALHHLGVRAVIGVNAVGGIRADLGP
                     RTLVVPDQLIDYTHGRVTSYCDVEGAEVRHIDFSEPYTQALRARLLAAARTADLAIVD
                     GGCYGATQGPRLETRAEIARLRRDGCDLVGMTGMPEAALARELGVDYACLALVANFAA
                     GCGDEAEISIEEIFAHLAAATAQVPVLLDALLRA"
     gene            2253..2459
                     /locus_tag="VFM52_00130"
     CDS             2253..2459
                     /locus_tag="VFM52_00130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007082713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0001072 - transcription antitermination
                     factor activity, RNA binding [Evidence IEA];
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein"
                     /protein_id="HET8763604.1"
                     /translation="MRFGTVKWFNDAKGFGFIAPEDGGEDVFVHFSAINSKGFRSLQE
                     GQRVKFDVTTGPKGQQASGVELAV"
     gene            2404..3108
                     /locus_tag="VFM52_00135"
     CDS             2404..3108
                     /locus_tag="VFM52_00135"
                     /inference="COORDINATES: protein motif:HMM:NF015866.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_process: GO:0055070 - copper ion homeostasis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="copper homeostasis protein CutC"
                     /protein_id="HET8763605.1"
                     /translation="MSPRAPRGSRHRASSWQSESSRTADLRVGHALPRSPAPRRGASC
                     LESSGAKPRVVEVAANSIASAVAVQVVGAGRVEPCSAVEPGGLTPSHATIAGGRQRLH
                     IPGYMPIRPRPGDFVYDATGLGAMQADIAACAARGCDGMVLGALDADGGMGQAGCQAL
                     VAAADDLGIAFHRAFDACRDRRQALETPIALGCGRVLASVGAPGAEGVAAIHTLVAPA
                     VGRIAAMPGPASMPGT"
     gene            3370..4584
                     /gene="fabV"
                     /locus_tag="VFM52_00140"
     CDS             3370..4584
                     /gene="fabV"
                     /locus_tag="VFM52_00140"
                     /EC_number="1.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014506054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004318 - enoyl-[acyl-carrier-protein]
                     reductase (NADH) activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-ACP reductase FabV"
                     /protein_id="HET8763606.1"
                     /translation="MIIKPKVRGFICVTAHPVGCERNVAEEIAITKAAMAQGAGAGPK
                     RVLVIGASTGYGLASRITTAFGYGAATLGVFFEKPSSHEKTGTAGWYNAAAFDKLAKQ
                     AGLYAKSINGDAFANATRERAIEIIKAEMGGPIDLVVYSLASPVRTLPDTGELVRSAL
                     KTIGDTFTASSVDTNKDVVIQASVEPATEQEIQDTVKVMGGEDWALWIDALAKAGVLA
                     DHARTVAYSYIGTEITWPMYWHGTLGQAKQHLDNTAKALRERHAATGLDARVSVMKSV
                     VTQASAAIPVIPLYVSIAFKIMKEKGVHEGCIEQINRLFHDRLYRADGAAPALDEDGR
                     VRLDDWELREDVQTACKTLWPQVTTENLKAITDYAGYKHEFLKLFGFDLADVDYGAEV
                     EADRQFDCIELH"
     gene            complement(4609..5067)
                     /locus_tag="VFM52_00145"
     CDS             complement(4609..5067)
                     /locus_tag="VFM52_00145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HET8763607.1"
                     /translation="MKFRTVAVTLLGIVVVVVAAGAGVIEKDRPAPGAPDGLLVTMQQ
                     LDANTRAAGEAIAAKNWPRVAELADQLNHHVEPPLGQKLRVMLWLRTQAPNFRGYDGK
                     LRTAAVAMGLAARAGDAQAVSASYTQLQAACSGCHGKYQAAYIAHFHAGE"
     gene            5205..>6298
                     /locus_tag="VFM52_00150"
     CDS             5205..>6298
                     /locus_tag="VFM52_00150"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008434846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HET8763608.1"
                     /translation="MVLRWLPGLLAACLICLPLVAPPTAAAETIGQQREGVLFWTQAQ
                     RDARFRTMYQRFPSDRAAHGTPVHALPAGKPLRVDGRDGNAWLAGYMAKYHVAGVMVV
                     QDGQVRLQRDALGFSPEQRWTSFSVAKSVTSVLLGVALQQGYIHSLDDRLDTYIPELR
                     GSAYAEVTVEQLLTMTSGVHWNEDYADAKSDVAQMYLGACVDGEAHVLTYLKRQPRQW
                     PAGTHWNYNTAETDLLGILVQRATKQSLASYLSQAIWQPYGMASDAYWIKDECDGSDT
                     GGSGLSATLADYARFGEFMLGGGKIDGKPAIAPAWLAGATHEHSATDAPDRGYGFLWW
                     TDTDGSYAAIGIFGQMIYIDPARKLVIAQVA"
BASE COUNT          968 a         2143 c         2207 g          980 t
ORIGIN      
        1 caccggccca ccctcctggt cgacggcaat cagattgtcg tcgccaccga tctcgcggat
       61 cgccgcgcac agtgccatga gctggtcgcg atcggcgtac gcgcgttcca tgccgatccg
      121 gcgatcaccg ccgacctgac cgccgcctac gtgcgcggca tgcacctggc cggcatggcc
      181 gccgtgctca agcatttccc cggccacggc tcggtggccg ccgatacgca caaggcgcag
      241 gcggtggacg cgcggccgct cgatgtcatc cgccgcgacg acctgcgccc gttcgccgaa
      301 ggcatcgccg cgcacgtcga ggcggtgatg ctggcacacg tgatctaccc ggcggtggac
      361 gccgagccgg ccggttactc gcgggtctgg atcgagcgga tcctgcgcgg cgagctcggc
      421 tttgccggca tcgccatcag cgacgacatc agcatggcgg cggccggcgt ggccggcagc
      481 gtggccgggc gcgtgcgcgg ccacctggat gccggctgcg acctggtgct ggcgtgcttc
      541 cccgacgtcg tcgacgaggc catcgccgcc gtcgccgggc gccccgccat cgcgccagaa
      601 cgcctcgccg ccttgcgtgg caccgtggcc gccacctggg ccggccttct cgacaacccg
      661 cagcgcgacc gtttcgtcgc gcgcatcacg gcgctcggcg ccgatcagga tcccgcatga
      721 atcaacctgt ccctggcctg caggatgcgc tggcgcactc tgaagtcctg cactcccgcg
      781 ccgaaatcga agccgtgatc gccgacatcg gccggcgcat cgacgccgag ctgcacggcg
      841 agcgcgcggt gttcctgacc gtgatgaacg gcgcgttgat gtttgccggg catcttgcgc
      901 tggcgatccg caccgatctc gaattcgact acgtgcacgc cacgcgttat cacggcgaca
      961 cccgcggcag cgcattgcac tggctgcgcg aaccggtggc cgatctgcgc ggccgcacgg
     1021 tgctgctggt ggacgatatc ctcgacgaag gcaatacgct caaggcggtg cgtgacgagt
     1081 gcctgcgccg cggcgccagg cgcgcgttga tcgtgagcct gtgcaccaag gatcacgatc
     1141 gcctggtgcc cggcatccat gcggatttca acggcatcgt gctgcccgat cgctacgtgt
     1201 tcggctacgg catggattac cacgagcagg gccgcaacct gccggatatc tacgcgttga
     1261 aggacgcgga ataggcatgc accagcaagg gcgaacggca tgaatgacgg ggcagggcag
     1321 atcgacctgg gcgtgatcgg cggcagcggc ctgtacgcgc tgccggggtt ggcgaacgcc
     1381 gtgcgcgaaa cggtggcaac gccgtggggc gcgccgtccg gcgacgtcgt ggtgggcgag
     1441 ctggccggca agcgggtggc gttcctggcc cggcatggcg agcggcacga cctgccgccg
     1501 caccgggtga attaccgcgc gaacctgtgg gcgctgcatc acctgggcgt gcgcgccgtc
     1561 atcggcgtca acgcggtggg cggcatccgt gcggatctcg ggccacggac gctggtggtg
     1621 ccggaccagc tcatcgacta cacccatggc cgcgtcacca gctactgcga cgtggaaggc
     1681 gcggaagtgc gccacatcga cttcagcgag ccgtacacgc aagcgttgcg ggcgcgtctg
     1741 ttggcagcag cgcgtacggc ggacctcgcg atcgtcgacg gcggttgcta cggcgcgacc
     1801 caggggccgc ggctcgaaac ccgcgcggag attgcccgcc tgcgtcgcga cggctgcgac
     1861 ctcgtcggca tgaccggcat gcccgaggcc gcgctggcgc gcgagctggg cgtggactat
     1921 gcctgcctcg cgctggtggc gaacttcgcc gccggctgcg gcgacgaggc ggagatcagc
     1981 atcgaggaaa tctttgcgca cctggcggca gccaccgcgc aggtgccggt gctgctggat
     2041 gccctgctgc gcgcgtgaca gcgcgttaag gcattaattc atgccgaaca ggcatgatgc
     2101 ggatggtcgc caaatgctgg atttgatgct tgcgcatatt gcactttgcc cggaaacctg
     2161 ttgatacttt ccgggtgccc gcgtcgcggc cagggggatg gttccaacac ggccgggtgc
     2221 acaccctgtc caggtttcca gaggttccag caatgcgttt cggtacggtc aagtggttca
     2281 acgatgccaa gggcttcggt ttcatcgcgc ccgaggacgg tggggaggac gtgttcgtcc
     2341 acttctcggc aatcaactcc aagggcttcc gcagcctgca ggaaggccag cgcgtcaagt
     2401 tcgatgtcac cacgggcccc aaggggcagc aggcatcggg cgtcgagttg gcagtctgag
     2461 tcgtctcgaa cggccgatct gcgggtcggt catgcactac ctcgaagccc cgcgccacgg
     2521 cgcggggctt cttgtctgga atcgtcgggc gcgaagccgc gcgtggtgga agtcgccgcc
     2581 aactccatcg cttccgccgt tgcggtgcag gtggttgggg ccgggcgcgt cgagccgtgt
     2641 tccgccgtgg aacctggtgg gctcaccccg tcgcatgcca cgattgccgg cgggcggcaa
     2701 cggttgcaca tcccgggtta catgccgatc cgcccgcgcc ccggggattt cgtgtacgac
     2761 gccaccgggc ttggcgcgat gcaggccgac attgcagcct gcgcggcccg gggttgtgac
     2821 ggcatggtgc ttggcgcact cgatgccgac ggtggcatgg gccaggccgg gtgccaggcc
     2881 ctggtggccg ccgccgacga cttgggcatc gcctttcatc gtgcattcga cgcgtgccgc
     2941 gatcggcggc aggcgctgga aacccccatc gcactgggtt gcgggcgggt actcgcttcc
     3001 gttggcgcgc ccggcgcgga gggtgttgcc gcgatccaca ccctggtcgc cccggccgtc
     3061 gggcgcatcg ccgccatgcc ggggccggca tcgatgccgg gcacctgacg gcgccggcag
     3121 tcgcgacggg tgagcgggaa ctccctgcgt ccgccaagcg tgcctggccg tcgcgcctgc
     3181 gtcatgcggc accgccgccg gctggcgtgc ccggcggtga ctggcgtacc gaagcggtga
     3241 tggtgcgcgc gctggtcgag gcgctgcagg cggtggactg aagcgctgcc ggcatttccc
     3301 taccgcagcg catggcgccc cgcgttcgct aagatgccgc attgcatttc ttgcacggag
     3361 cgacctgcag tgatcatcaa acccaaagtg cgcggcttca tctgcgtcac cgcccatccg
     3421 gtcggttgcg agcgcaacgt ggccgaggaa atcgcgatca ccaaggcggc catggcccaa
     3481 ggggccggcg caggtccgaa gcgggtgctg gtgatcggcg cttccaccgg ctatggcctc
     3541 gcctcgcgca tcaccaccgc gttcggctac ggcgcggcca cgctcggcgt gttcttcgag
     3601 aaaccgagca gccacgagaa gaccggcacc gccggctggt acaacgcggc cgcgttcgac
     3661 aagctggcca agcaggccgg cctgtacgcg aagtcgatca acggcgacgc gttcgccaac
     3721 gccacgcgcg agcgcgcgat cgagatcatc aaggcggaga tgggcgggcc gatcgacctc
     3781 gtcgtctact cgctggcctc gccggtgcgc acgctgccgg acaccggcga gctggtgcgc
     3841 tccgcgctca agaccatcgg cgacaccttc accgccagct cggtggacac caacaaggac
     3901 gtggtgatcc aggccagcgt cgagccggcg accgagcagg agatccagga cacggtgaag
     3961 gtgatgggcg gcgaggactg ggcgctgtgg atcgatgcgc tggcgaaggc cggcgtgctg
     4021 gccgaccacg cgcgcaccgt cgcctacagc tacatcggca ccgagatcac ctggccgatg
     4081 tactggcacg gcacgctggg ccaggccaag cagcacctgg acaacaccgc caaggcgctg
     4141 cgcgagcggc atgccgcaac gggcctcgac gcccgcgtga gcgtgatgaa gtccgtcgtc
     4201 acccaggcca gcgcggcgat tccggtgatc ccgctgtacg tctccatcgc cttcaagatc
     4261 atgaaggaga agggcgtgca cgaaggctgc atcgagcaga tcaaccgcct gttccacgac
     4321 cgcctgtacc gcgccgacgg cgccgcgccg gcgctggacg aggacggccg cgtgcgcctg
     4381 gacgactggg aattgcgcga ggacgtgcag accgcctgca agacgctgtg gccgcaggtc
     4441 accaccgaaa acctcaaggc catcaccgac tacgccggct acaagcacga gttcctgaag
     4501 ctgttcggct tcgacctcgc cgacgtggat tacggcgccg aggtggaagc ggaccggcag
     4561 ttcgactgca tcgagctgca ctgatccatc cgacgcggtt ccgcggcgtc actcgccggc
     4621 gtggaagtgc gcgatatagg ccgcctggta tttcccgtgg cagccgctgc aggcggcctg
     4681 cagctgcgtg tagctggcgc tgacggcctg ggcgtcgccg gccctggccg ccaggcccat
     4741 cgccaccgcc gcggtgcgca acttgccgtc gtagccgcgg aaattcggcg cctgcgtgcg
     4801 cagccacagc atcacgcgca gcttctggcc gagcggcggt tccacgtggt gattgagctg
     4861 gtcggctagc tcggcgacac gtggccagtt cttcgcggcg attgcctcgc cggcggcgcg
     4921 ggtgttggca tccagctgtt gcatcgtcac cagcaggcca tccggcgcgc ccggtgccgg
     4981 gcgatccttc tcgatcacac cggcgccggc ggcgaccacc accacgacga tgccgagcaa
     5041 ggtcacggcc actgtgcgga acttcatcgc tgtcctcccc gatccggacc tacccggcac
     5101 gccgtgacga tagcgcgaga ggccgccggc atgcgctgat gcaggacagc ccggtgcgct
     5161 tgaccgcccc gctagactgg cggctcccga cgagaggatg ccccatggtt ctgcgctggt
     5221 tgcccggcct gcttgccgcg tgcctgatct gcctgccgct ggtggcgccg ccgaccgcgg
     5281 ccgccgaaac catcggccag cagcgcgagg gcgtgctgtt ctggacgcag gcgcagcgtg
     5341 atgcgcgctt ccgcacgatg taccagcgct ttcccagcga tcgcgccgcg catggcaccc
     5401 cggtgcatgc gctgccggcc ggcaagccgt tgcgcgtcga cggccgcgac ggcaacgcct
     5461 ggctggccgg ctacatggcg aagtaccacg tggccggcgt gatggtggtg caggatggcc
     5521 aggtgcggct gcagcgcgac gcgctcgggt tctcgccgga gcagcgctgg acttcgttct
     5581 cggtggcgaa atcggtgact tcggtgctgc tcggcgtggc gctgcagcag gggtatatcc
     5641 acagcctgga cgaccggctc gacacctaca tccccgagtt gcgcggcagc gcgtatgccg
     5701 aggtcacggt ggaacagttg ctgacgatga cctcgggcgt gcactggaac gaggattacg
     5761 ccgacgccaa gtcggacgtg gcgcagatgt acctcggcgc ctgcgtggac ggcgaggcgc
     5821 acgtgctgac gtatctcaag cggcagccgc ggcagtggcc ggccggcacg cactggaact
     5881 acaacaccgc cgagaccgac ctgctcggca tcctcgtgca gcgcgcgacg aagcagtcgc
     5941 tggcgtccta cctttcgcag gcaatctggc agccgtacgg catggcgtcc gacgcgtact
     6001 ggatcaagga cgagtgcgac ggcagcgaca ccggtggcag cgggctgtcg gcgacgctgg
     6061 ccgactacgc gcgcttcggc gagttcatgc tgggcggcgg caagatcgac ggcaagccgg
     6121 cgatcgcgcc ggcatggctc gccggcgcca cgcatgagca cagtgccacc gatgcgccgg
     6181 accgcggcta cggtttcctg tggtggacgg acaccgacgg cagttacgcg gcgatcggca
     6241 tcttcggcca gatgatctac atcgaccccg cgcgcaagct ggtgatcgcg caggtggc
//
LOCUS       DASSVL010000010         7845 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1045427,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000010 DASSVL010000000
VERSION     DASSVL010000010.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 7845)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7845)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7845
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1045427"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1190)
                     /gene="ftsW"
                     /locus_tag="VFM52_00155"
     CDS             complement(<1..1190)
                     /gene="ftsW"
                     /locus_tag="VFM52_00155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014401866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="putative lipid II flippase FtsW"
                     /protein_id="HET8763609.1"
                     /translation="MLDASQATRRNDAPGRYDRLLLLALAGLVGIGIVMVTSSSIAVA
                     DNNARGAFYFLKRDLFFLAIGAAAAGIAMRTELKLLERRAFPLLGLGVLLLTAVFLPF
                     IGMRINGAHRWLNLVVTSFQPVEAVKLILVVYVASYLMRHRDSVETSFLGLIKPLAVA
                     AVLVLLLLAQPDFGSATLVISVTIAMVWLGGARPMHLAVMGLPLMPLLYIAATGESYR
                     VKRLTSFMDPWAHPFTDGFQLTQSLMAIGRGEWTGVGLGSSVLKLSYLPEAHTDFIFA
                     VLGEELGLVGTLLVIVLFLTIAYAGLRVAMEARDLFVRYTAAGIVIWLMAHVVINIGM
                     VLALLPVIGIPLPLVSYGGSSLMLFIGAMGLLISFARTEPHAAHELRRRKRERRAVTG
                     RGRGA"
     gene            complement(1302..2402)
                     /gene="mraY"
                     /locus_tag="VFM52_00160"
     CDS             complement(1302..2402)
                     /gene="mraY"
                     /locus_tag="VFM52_00160"
                     /EC_number="2.7.8.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008045924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008963 -
                     phospho-N-acetylmuramoyl-pentapeptide-transferase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phospho-N-acetylmuramoyl-pentapeptide-
                     transferase"
                     /protein_id="HET8763610.1"
                     /translation="MLLELADWLARHFTALHLFQYITFRSIMAALTALAITLLLGPAM
                     IRELAVLKAGQVVRSDGPKTHLSKAGTPTMGGVMILFAVTVASILWADLHNRYVWIVL
                     AVMLTFGVIGFYDDYRKLVLKDSRGLASRWKYFWQSLFGLAAALFLYFTAPHAVGSLP
                     VAETSLYVPLFKHVVIPLGGFFVVVTYFIIVGFSNAVNLTDGLDGLATMPTVLVSGAL
                     GVFAYLAGNRVFSDYLGIPAIPGAGELAIITGALAGAGLGFLWFNTYPAQVFMGDVGA
                     LAIGAALGCIAVIVRQEVVLLIMGGIFVLETASVMIQVASFKLTGRRVFRMAPIHHHF
                     ELKGWPEPRVIVRFWIISVVLVLVGLATLKVR"
     gene            complement(2392..3759)
                     /gene="murF"
                     /locus_tag="VFM52_00165"
     CDS             complement(2392..3759)
                     /gene="murF"
                     /locus_tag="VFM52_00165"
                     /EC_number="6.3.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015448707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0047480 -
                     UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase
                     activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-
                     alanine ligase"
                     /protein_id="HET8763611.1"
                     /translation="MMTLSSIAMWTHGHLVGADADVAGVAIDTRKVTPGSLFAAFKGE
                     HVDGHDYLPQALAAGAAGALVAHKVDSPLPQVLVENVETALGDLASAVLAQRHARVIG
                     ITGSNGKTTVKTLTAAILSLHGRTHATQGSYNNEIGLPLTLLSMPEDTEYAVLEMGAG
                     KPGDIAYLAAIARPDIGLVNIIAPAHLERMGSVEVVAETKGAMYQALPADGTAIINAD
                     DGFAGFFAGLAGARRTLRFGLEHKADVGADIVEERVDGSLFLLSTPVGDVEVNLALPG
                     RHNVMNAMAAASIALALDVPLATIARGLEQARAVPGRLRRIETAGGWTLIDDSYNANP
                     SSMAAAIATLALAGGERWLVIGDMAELGPDERALHAGVGEQARAAGIERLFALGPLSA
                     AAVAAFGPGGEHFADKAALIAALGGAVHAGVTCLVKGSHSAGMTQVVTALEAVAGKGG
                     ATDAA"
     gene            complement(3756..5243)
                     /locus_tag="VFM52_00170"
     CDS             complement(3756..5243)
                     /locus_tag="VFM52_00170"
                     /EC_number="6.3.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019465351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016881 - acid-amino acid ligase activity
                     [Evidence IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,
                     6-diaminopimelate ligase"
                     /protein_id="HET8763612.1"
                     /translation="MSGHLDQLLLGIADAELAAAPAAARMVVAGLNLDSRQVRQGEAF
                     VALHGTRGHGIAYAADAVQRGAVVVLAEAPLVEAPAPGVPVLWIGHLHEQLGEIAARF
                     HDRPAEALRIVGVTGTNGKTSCVQLLAQAWTALGHRAATIGTLGAGVHGQLLEGERTT
                     PDALSVHRLLAEFRDEGATHVAMEVSSHALDQGRVGAVDFEVAAFTNLTRDHLDYHKT
                     MEAYGAAKARLFAWPGLRAAAINGDDAFGAQLLERLAPDVRALRLSANGDAVADVVAE
                     NVSTTGEGLAFSLRTPWGRHSVRSHLIGRFNVANLITVAACLGALDEPFDRVIDVLQN
                     LEPVNGRMSRLGGRDGQPLVVVDYAHTPDALDKVLTAVRAHCAGRLYCVFGCGGERDA
                     GKRPLMGALAARLADVSIVTDDNPRGEDGDAIVAQIVAGMADGHPYSVERDRATAIAQ
                     AIAQAGAGDAVVIAGKGHETYQESATGKHPFNDMLVARAALERRA"
     gene            complement(5240..7117)
                     /locus_tag="VFM52_00175"
     CDS             complement(5240..7117)
                     /locus_tag="VFM52_00175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007509350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008658 - penicillin binding [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 2"
                     /protein_id="HET8763613.1"
                     /translation="MSWREQVIAQFLHGTPAANRRHGAGPDVRRRMSLVAVLLGLTSL
                     GLAARAFDLQVVRKQFYQKQGDARFLREVPIPVSRGTIFDRNGEPLAVSTPVTSIWAN
                     PAELLANDDRLPQLAQAIGGNVADIKSYLEARANREFVYLRRQMAPEAAQAVLDLDIP
                     GVNGQREFKRYYPSGEVTAHILGFTNIDDHGQEGLELAYDDWLAGKPGAKRVIRDGKG
                     HVVEDLEQVRAPKPGQNLTLSIDRGIQFLAYNELKNTLDKFHAAAGSIVVLDVHTGEI
                     LAMASMPTFNPNAVAGSKPAQRRNRAVTDVVEPGSTMKALTLAAALSSGKYTPTSPIV
                     DTGNGHWYFYGHDIRDDDPNGLLTPTGVITRSSNVGAAKIAMCLDTPLMYDTYRAFGL
                     GNSTGSGFPGEAAGYLKVGRDWRPLEKAIMAYGYGVNVTPLQLANAYATIADGGLMHT
                     PTFIKGDDSPGKQIVSPQVAHELVSMLETVTGPGSTGSRGRIANYSVAGKTGTSHQAI
                     AGGYSNNTYNSLFVGIVPASNPRLVGAVVITGTTSQYGYFGGLVAAPAFSAVLGGALR
                     LLDIPPDNIGRWYVGGPLQGNGGLVGNPTAPAAALPPPAADNAAREAPIDEAPTVGGT
                     P"
     gene            complement(7114..7377)
                     /gene="ftsL"
                     /locus_tag="VFM52_00180"
     CDS             complement(7114..7377)
                     /gene="ftsL"
                     /locus_tag="VFM52_00180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008215947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsL"
                     /protein_id="HET8763614.1"
                     /translation="MQTTLLLALFAAVLASAIGVVWARYESRVLFVKLTALQNQRDEM
                     NIEYGRLELEQATFAEPRRIDEEARSQLGMLDPRPQDIRLLHR"
     gene            complement(7383..>7845)
                     /gene="mraW"
                     /locus_tag="VFM52_00185"
     CDS             complement(7383..>7845)
                     /gene="mraW"
                     /locus_tag="VFM52_00185"
                     /EC_number="2.1.1.199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015448710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="16S rRNA
                     (cytosine(1402)-N(4))-methyltransferase"
                     /protein_id="HET8763615.1"
                     /translation="SRRIARAIVARRAEAPITRTGELAALIEATIGRREPGKHPATRS
                     FQALRIRVNGELDAVQRGLAAALARLAPGVRLAVISFHSLEDRIVKQFIRDHSGRVQG
                     SRRAPPTAAPVAELAAVGKAQFPSAAELARNPRARSAVLRVAERLPAAGQA"
BASE COUNT         1190 a         2746 c         2764 g         1145 t
ORIGIN      
        1 gccccgcgac cgcgcccggt aacagcacga cgctcgcgct tgcggcggcg cagctcgtgg
       61 gcggcgtgcg gctcggtgcg ggcgaaggag atcagcagtc ccatcgcccc gatgaacagc
      121 atcagcgagg acccgccgta cgagaccagc ggcaacggga tgccgatcac gggcagcagg
      181 gccagcacca tgccgatgtt gatcaccacg tgcgccatca gccagatcac gatgcccgcg
      241 gcggtgtagc ggacgaacag gtcccgggcc tccatggcga cccgcagccc ggcgtacgcg
      301 atcgtcagga acagcacgat caccagcagc gtgccgacga ggccgagctc ctcgccgagc
      361 acggcgaaga tgaagtcggt gtgcgcctcg ggcaggtagg acagcttgag cacgctcgat
      421 cccagtccca cgccggtcca ctcgccgcgg ccgatcgcca tcagcgactg ggtgagctgg
      481 aagccgtcgg tgaacgggtg cgcccacgga tccatgaacg aggtgaggcg cttgacgcga
      541 tagctttcgc cggtggccgc gatgtacagc aacggcatca gcggcaggcc catcaccgcc
      601 aggtgcatcg gccgcgcgcc gcccagccac accatcgcga tggtgaccga gatcaccagc
      661 gtcgccgagc cgaagtcggg ctgcgcgagc agcagcagca ccagcacggc agcgaccgcc
      721 agcggcttga tcaggccgag gaaactggtc tccacgctat cgcggtggcg catcaggtag
      781 ctggcgacgt acaccaccag gatcagcttc accgcctcca ccggctggaa gctggtcacc
      841 acgaggttga gccagcggtg cgcgccgttg atgcgcatgc cgatgaacgg caggaacacc
      901 gccgtcagca gcagcacgcc gagccccagc aacgggaacg cgcggcgttc gagcagcttc
      961 agctcggtac gcattgcgat gccggccgcc gccgcgccga tcgcgaggaa gaacaggtcg
     1021 cgcttcagga aatagaacgc cccgcgcgcg ttgttgtccg ccaccgcgat cgagctcgag
     1081 gtgaccatca cgatgccgat cccgaccagt ccggccaggg ccagcagcag cagccggtcg
     1141 tagcgacctg gcgcatcgtt gcgtcgcgtg gcctgggagg cgtcaagcat ggccgcgctc
     1201 cgtttgccgg cgccgcgaaa tggcgaacga cggaccggca ggcgcgcgcc ggctggcgcc
     1261 cttcccgttt ccgattcccg atggacgatt ccaggtgttc atcagcgcac cttcaacgtc
     1321 gccagaccga ccagcaccag caccacggaa atgatccaga agcgcacgat cacgcgcggc
     1381 tcgggccagc ccttgagttc gaaatggtgg tggatcggcg ccatgcggaa cacgcgcctg
     1441 ccggtgagct tgaagctcgc cacctggatc atcaccgagg cggtttccag cacgaagatg
     1501 ccgcccatga tgagcagcac cacttcctgg cgcacgatca ccgcgatgca gccgagcgcc
     1561 gcgccgatcg cgagcgcgcc gacgtcgccc atgaacacct gcgcgggata ggtgttgaac
     1621 cacaggaaac cgaggccggc gccggccagc gcgccggtga tgatcgccag ctcgccggcg
     1681 ccggggatcg ccgggatgcc gaggtagtcg gagaacacgc ggttgccggc gaggtaggcg
     1741 aacacgccga gcgcgccgga caccagcacc gtcggcatcg tggccagccc gtcgaggccg
     1801 tcggtgaggt tcaccgcgtt ggagaagccg acgatgatga aataggtgac gacgacgaag
     1861 aacccgccga gcggaatcac cacgtgcttg aacagcggca cgtacagcga ggtttccgcc
     1921 accggcaggc tgccgaccgc atgcggcgcg gtgaagtaca ggaacagcgc ggcggcgagg
     1981 ccgaacagcg actgccagaa atacttccag cggctggcca gcccgcggct gtccttcagc
     2041 accagcttgc ggtagtcgtc gtagaagccg atcaccccga aggtgagcat caccgccagc
     2101 acgatccaca cgtagcggtt gtgcaggtcg gcccacagga tcgaggcgac ggtgaccgcg
     2161 aacaggatca tcaccccgcc catggtcggc gtgccggcct tggacaggtg cgtcttcggg
     2221 ccgtcgctgc gcaccacctg cccggctttc agcaccgcca gctcgcggat cattgccggg
     2281 ccgagcagca gcgtgatcgc cagcgcggtg agcgcggcca tgatgctgcg gaaggtgatg
     2341 tactggaaca ggtgcagcgc ggtgaagtgg cgcgccagcc agtcggcgag ttcaagcagc
     2401 atcggtcgcg ccccccttgc cggcaacggc ttccagtgcg gtgacgacct gcgtcatgcc
     2461 ggccgagtgc gagcccttga ccaggcaggt gacgccggca tgcaccgcgc cgcccagtgc
     2521 ggcgatcagc gccgccttgt cggcgaagtg ctcgccgccc ggcccgaatg ccgcgacggc
     2581 ggcggcgctc aacgggccga gggcgaacag gcgttcgatg cccgccgcac gcgcctgctc
     2641 gccgacgccg gcgtgcaagg cgcgctcgtc cggcccgagc tcggccatgt cgccgatcac
     2701 cagccagcgt tcgccgccgg cgagcgcgag cgtggcgatc gccgccgcca tcgagctcgg
     2761 gttggcgttg tagctgtcgt cgatcagcgt ccagccgccg gcggtctcga tccggcgcag
     2821 ccgccccggc accgcgcgcg cctgttccag cccgcgggca atggtggcca gcggcacgtc
     2881 gagcgcgagc gcgatgctcg ccgcggccat cgcattcatc acgttgtggc gccccggcag
     2941 cgcgagattc acctcgacgt cgcccaccgg cgtgctgagc aggaacaggc tgccgtcgac
     3001 gcgctcctcg acgatgtcgg cgccgacgtc ggccttgtgc tccagcccga aacgcagcgt
     3061 gcggcgcgcg ccggccagcc cggcaaagaa acccgcgaac ccgtcgtccg cgttgatgat
     3121 ggccgtgcca tcggccggca gtgcctggta catcgcgccc ttggtctcgg caacgacctc
     3181 gacgctgccc atccgctcaa gatgcgccgg ggcgatgatg ttgacgaggc cgatatcggg
     3241 ccgtgcgatg gcagcgagat aggcgatgtc gcccggcttg ccggcaccca tctcgagcac
     3301 cgcgtattcg gtgtcttccg gcatcgacag cagcgtcagc ggcaggccga tctcgttgtt
     3361 gtagctgccc tgggtggcat gcgtgcggcc gtgcagggag aggatggccg cggtcagcgt
     3421 cttgaccgtg gtcttgccgt tcgagccggt gatgccgatc acccgcgcgt ggcgctgcgc
     3481 gagcacggca ctggccaggt cgccgagcgc ggtttcgacg ttttccacca gcacctgcgg
     3541 cagcggcgag tcgaccttgt gcgccaccag cgcaccggcc gcaccggccg cgagcgcctg
     3601 cggcaggtag tcgtggccat cgacgtgctc gcccttgaac gcggcgaaca ggctgccggg
     3661 cgtcaccttg cgggtgtcga tcgcgacacc ggccacatcg gcatcggcgc caaccaggtg
     3721 cccgtgcgtc cacatcgcga tggaggaaag cgtcatcatg cgcgccgctc cagggccgcg
     3781 cgcgcgacca gcatgtcgtt gaacgggtgc ttgccggtcg cactctcctg ataggtctcg
     3841 tggcccttgc cggcaatcac caccgcatcg ccggcgccgg cctgcgcgat cgcctgcgca
     3901 atggctgtcg cgcggtcgcg ctcgacgctg tacggatggc cgtccgccat gccggcgacg
     3961 atctgcgcga cgatcgcgtc gccatcctcg ccgcgcgggt tgtcgtcggt gacgatggaa
     4021 acgtcggcca gccgcgccgc cagcgcgccc atcagcggcc gcttgccggc atcccgctcg
     4081 ccgccgcaac cgaacacgca atacagccgc ccggcgcaat gcgcgcgcac cgcggtgagc
     4141 accttgtcca gcgcgtccgg cgtgtgcgcg tagtcgacca ccaccagcgg ctggccgtcg
     4201 cggccgccga gccggctcat gcggccgttc accggttcga ggttctgcag cacgtcgatc
     4261 acgcggtcga acggctcgtc gagcgcgccg aggcaggcgg cgacggtgat gaggttggca
     4321 acgttgaagc ggccgatcag gtggctgcgc accgagtgcc ggccccacgg tgtgcgcagg
     4381 ctgaaggcca gcccctcgcc ggtggtgctg acgttctccg ccacgacgtc cgccaccgcg
     4441 tcgccgttgg cgctcaggcg cagcgcgcgc acgtcgggcg cgaggcgttc cagcaactgc
     4501 gcgccgaagg cgtcgtcgcc gttgatcgcc gccgcgcgca ggccgggcca ggcgaacagc
     4561 ctggccttcg cggcgccgta ggcttccatc gtcttgtggt agtcgaggtg gtcgcgggtg
     4621 aggttggtga acgcggccac ctcgaaatcc acggcaccga cgcggccctg gtccagtgcg
     4681 tgcgaggaga cttccatcgc cacgtgggtg gcgccctcgt cgcggaattc ggccagcagg
     4741 cgatgcacgc tgagcgcatc cggcgtggtg cgctcgccct ccagcaactg gccatgcacg
     4801 ccggcgccca gcgtgccgat ggtcgcggcg cggtggccga gcgccgtcca ggcctgcgcc
     4861 agcaactgca cgcacgaggt cttgccgttg gtgccggtga cgccgacgat gcgcagcgct
     4921 tcggccgggc ggtcgtggaa gcgcgcggcg atttcgccga gctgctcgtg caggtgcccg
     4981 atccacagca ccggcacgcc cggcgccggc gcctcgacga gcggcgcttc cgccagcacg
     5041 accaccgcac cgcgctggac cgcgtccgcg gcgtaggcga tgccgtgtcc gcgggtgccg
     5101 tgcagggcca cgaaggcctc gccttggcgc acctggcgcg agtcgaggtt cagccccgcc
     5161 accaccatgc gcgcggccgc cggtgccgcg gccagttcgg cgtcggcgat gccgagcagg
     5221 agctggtcga gatgcccgct catggcgtgc ctccgaccgt cggggcctcg tcgatcggcg
     5281 cctcgcgggc ggcattgtcg gcagccggcg gcggcagcgc ggcagccggc gcggtcgggt
     5341 tgccgaccag gccgccgttg ccttgcagcg ggccaccgac gtaccagcgt ccgatgttgt
     5401 ccggtgggat gtcgagcagg cgcaacgcgc cgccgagcac ggcggagaac gccggcgccg
     5461 cgacgaggcc gccgaaatag ccgtactggc tcgtcgtgcc ggtgatgacc acggcgccga
     5521 ccaggcgcgg gttgctcgcc ggcacgatgc cgacgaacag cgagttgtag gtgttgttgg
     5581 aatagccgcc ggcaatcgcc tggtgcgagg tgccggtctt gccggccacg ctgtagttgg
     5641 cgatgcgccc gcgcgaaccg gtgctgccgg gaccggtgac ggtttccagc atcgacacca
     5701 gctcgtgcgc gacctgcggc gagacgatct gcttgcccgg gctgtcgtcg cccttgatga
     5761 aggtcggcgt gtgcatcaac ccgccatcgg cgatggtggc gtaggcattg gcgagctgca
     5821 gcggggtcac gttgacaccg tagccgtagg ccatgatcgc cttttccagc ggccgccagt
     5881 cgcgtcccac tttcaggtaa cccgccgcct cgccgggaaa cccgctgccg gtcgagttgc
     5941 cgagcccgaa cgcgcgatag gtgtcgtaca tcagcggcgt atcgaggcac atcgcgatct
     6001 tcgccgcgcc gacgttgctc gaccgggtga tgacgccggt cggcgtcagc aggccgttgg
     6061 gatcgtcgtc gcggatgtcg tggccgtaga agtaccaatg cccgttgccg gtatcgacga
     6121 tcgggctggt tggcgtgtac ttgccgctgg acagcgcggc ggcaagcgtc aatgccttca
     6181 tcgtcgagcc cggctcgacc acgtcggtca ccgcgcggtt gcgccgctgc gccggcttgc
     6241 tgccggccac cgcgttcggg ttgaacgtgg gcatgctggc catcgccagg atctcgccgg
     6301 tgtgcacgtc gagcaccacg atcgagccgg ccgcggcgtg gaacttgtcc agcgtgttct
     6361 tgagctcgtt gtaggccagg aactggatgc cgcggtcgat gctgagcgtc aggttctggc
     6421 cgggcttcgg cgcgcgcacc tgttccaggt cctcgaccac gtggcccttg ccgtcgcgga
     6481 tcacgcgctt cgcgcccggc ttgccggcga gccagtcgtc gtacgccagc tccaggcctt
     6541 cctgcccgtg gtcgtcgatg ttggtgaagc cgaggatgtg cgcggtgacc tcgcccgacg
     6601 ggtagtagcg cttgaactcg cgctggccgt tgacgccggg gatgtccagg tcgagcaccg
     6661 cctgcgcggc ttccggcgcc atctgccggc gcaggtagac gaactcgcgg ttggcgcgcg
     6721 cttcgagata gctcttgatg tccgccacgt tgccgccgat cgcctgcgca agctggggca
     6781 ggcggtcgtc gttcgccagc agctcggccg ggttggccca gatcgaggtg accggggtgg
     6841 atacggccag cggctcgccg ttgcggtcga agatggtgcc gcgcgacacc gggatcggca
     6901 cctcgcgcag gaaccgcgca tcgccctgct tctggtagaa ctgcttgcgc accacctgca
     6961 ggtcgaacgc gcgtgcagcg aggccgagcg aggtcagccc gagcagcacc gccaccagcg
     7021 acatgcgccg gcgcacatcc gggccggcgc catgccgccg gttggcggcc ggggtgccgt
     7081 gcaggaattg ggcgatgacc tgttcgcgcc agctcatcgg tgcagcaacc ggatgtcttg
     7141 cggccgcggg tcgagcatgc cgagctggct gcgcgcctcc tcgtcgatgc gccgcggctc
     7201 ggcgaacgtc gcctgctcca gctccagccg gccgtattcg atgttcatct cgtcgcgctg
     7261 gttctgcagc gcagtcagct tgacgaacag cacgcggctt tcgtagcgcg cccacaccac
     7321 gccgatcgcg ctggccagca cggcggcgaa cagcgccagc agcaaggtgg tctgcagcgc
     7381 cttcatgctt gccccgccgc gggcaggcgt tcggccacgc gcagcaccgc cgagcgcgcg
     7441 cgcgggttgc gcgccagctc ggccgcggag gggaactgcg ccttgcccac ggcggccaat
     7501 tcggccaccg gggctgcggt aggcggggcg cgccgactgc cctgcacgcg gccggagtgg
     7561 tcacggatga actgcttgac gatgcgatcc tcgagcgaat ggaagctgat gacggcgagc
     7621 cgcacgcctg gtgcaaggcg cgccagcgcc gcggcaaggc cgcgctgcac cgcatcgagc
     7681 tcgccgttca cgcggatgcg cagcgcctgg aaactgcgcg tggccggatg cttgcccggc
     7741 tcgcggcggc cgatggtggc ctcgatcagc gccgccagct cgccggtgcg cgtgatcggc
     7801 gcctcggccc ggcgcgcgac gatggcgcgc gcgatcctgc gcgag
//
LOCUS       DASSVL010000011         3743 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1214941,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000011 DASSVL010000000
VERSION     DASSVL010000011.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3743)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3743)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3743
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1214941"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(95..661)
                     /locus_tag="VFM52_00190"
     CDS             complement(95..661)
                     /locus_tag="VFM52_00190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007806439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrous oxide reductase accessory protein NosL"
                     /protein_id="HET8763616.1"
                     /translation="MLVALLAGCNAAPPPIRHAVNVLPGDTCAVCGMELARSPGPRGQ
                     AWVAGHARPLMFDSTRDFFAYVLQPENQSGLQDLFVQDTTRIDWQHPGRDAVTFIDAR
                     KAVYVAWQPLPGSMGPTLAPFADRRAAEAFAQAHGGAVLMFTAITPDLIATLGYHCPA
                     PAAPGAVPCILARVAEPAMPVSPAAHTH"
     gene            complement(718..1551)
                     /locus_tag="VFM52_00195"
     CDS             complement(718..1551)
                     /locus_tag="VFM52_00195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015448328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HET8763617.1"
                     /translation="MNAILTVAWKEFRDDFRNRWTVALTVLFALLALGIAWFGGAAAG
                     RVGFTSFDATLASLTTLGAFVIPLIGLLIAYDTIVGERDDGTLLLMLSYPLARGQLVG
                     GKFLGHCAALAAATLAGFTLAVAIMQVMQPPAQTLAAWLYIARFILSASLLGASFVGF
                     ACLISVLTTSKSRAAGMALISWLASVVLFDLVLLALLVVSGGNPLERAVYPYLLLLNP
                     VDVFRLVNLAALGDGAGNELLTGMTAGHAYPAALLYGVLLAWAALPFAWAALAFRGKE
                     V"
     gene            complement(1548..2477)
                     /locus_tag="VFM52_00200"
     CDS             complement(1548..2477)
                     /locus_tag="VFM52_00200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008433403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HET8763618.1"
                     /translation="MSHAIDFEGLTKRYGALTALDNVSAGVPHGQVIGLLGHNGAGKS
                     TLIKLILGLIAPSAGRLEVLGRDPWRAPALRLRIGYLPENAAFYPNLTGRELLDYLAK
                     LKRAQRSQVQALLERVGLADAAKRRIGTYSKGMRQRLGLAQALLGEPELLLLDEPTTG
                     LDPQASRELYRIVGELRADGRSVVISSHLLAELEPHVDGALILRQGRLLAAGSLAELG
                     EQASLPARVLLRPYENAVRELLARLASRQLSALPRPDGRLELELPRAAKLRALRELVD
                     DPAIADLDVHEPTLTQLYDWLGASPERPQETRA"
     gene            complement(2461..>3743)
                     /locus_tag="VFM52_00205"
     CDS             complement(2461..>3743)
                     /locus_tag="VFM52_00205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015448326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="nitrous oxide reductase family maturation
                     protein NosD"
                     /protein_id="HET8763619.1"
                     /translation="PTLLMALVLALPLAASSRAQEPLAALIAAAPPGATVRVPTGVHA
                     VRGLRLDKPVTLVGAPGAVLDAGGSGDVLRIGAANVTVRGLTLRRSGTDLTAENAGIF
                     VEQKARDVTLDHNRIEDTLFGVYLDGPANVQVTNNVIRGLHSLQASDRGDGIHMWNDT
                     GCTIEGNDIVGSRDGIYVYVSSNNAFIRNTVQHVRYGVHYMYSNHNVLRDNTSRGNVA
                     GFALMSSDHLQVTGNIAEDDQSYGFLLNYISHSRFSDNEARRITGLRGADGGTLDGGE
                     GKGVFVYLSQFNDFHANVIANSEIGIHVTAGSEHNRLWANRFVANRVQVKYVQNLAQE
                     WSVDRRGNYWSDYLGWDLDGDGIGDVPFRPNDGVDVLLWKYPSARSLMSSPAILLLRY
                     VQRAFPVFTPPSVQDSHPLMHAPTPSGPEHVARN"
BASE COUNT          611 a         1233 c         1333 g          566 t
ORIGIN      
        1 agcttcccgg tgccgaagat gagcagcacg acggcaagca ggatcagcca gtgcgaaatg
       61 ctgttgagtc cgaacatggg cgggtctccg gtggtcagtg ggtgtgggca gcgggcgaca
      121 cgggcatcgc cggctccgcg acgcgggcca ggatgcacgg cacggcgccg ggtgctgccg
      181 gggcggggca gtggtaaccc agtgttgcga tcaggtccgg tgtgatggcg gtgaacatca
      241 acacggcgcc gccgtgggct tgcgcgaacg cttcggcggc cctgcggtcc gcgaacggcg
      301 ccagggtcgg ccccatcgat cccggcaacg gctgccaggc gacgtacacc gctttgcgcg
      361 catcaatgaa ggtgacggcg tcgcggccgg ggtgctgcca gtcgatgcgg gtggtgtcct
      421 gcacgaacag gtcctgcagg ccggattggt tttcgggctg caggacatag gcgaagaagt
      481 cgcgtgtcga atcgaacatc agcggccgcg cgtggcccgc gacccacgct tggccgcgcg
      541 ggccgggcga gcgcgccagt tccatgccgc agaccgcgca ggtatcgccg ggcaggacgt
      601 tcacagcgtg gcgaatcggc ggcggcgcag cgttgcaccc ggcaagcagg gccaccagca
      661 cgatcagcgt gctccatccg tgcaggccga tgcgccatgg cgtgccaaat gccatcctca
      721 aacctccttg ccgcggaacg cgagtgccgc ccacgcgaac ggcagcgcgg cccacgccag
      781 caacacaccg tacagcagcg ccgcgggata ggcgtggccg gcggtcatgc ccgtcagcaa
      841 ttcgttgccg gcgccgtcgc ccaacgcggc aagattgacc agccggaaca cgtcgacggg
      901 attcagcagc agcaggtacg ggtacaccgc gcgctcgagc ggattgccgc cgcttaccac
      961 cagcagcgcc agcagcacca ggtcgaacaa caccacgctt gccagccagc tgatcagggc
     1021 catgccggcc gcgcgcgact tgctggtggt cagcacgctg atcaggcagg cgaagccgac
     1081 gaaactcgcc ccgagcaacg acgcgctcag gatgaagcgc gcgatgtaca gccacgccgc
     1141 cagcgtctgc gcgggtggct gcatcacctg catgatcgcc accgccagcg tgaagcccgc
     1201 cagcgttgcg gccgccagtg ccgcgcagtg accaaggaac ttgccgccga ccagttggcc
     1261 gcgcgccaac gggtaactca gcatcagcag cagcgtgccg tcgtcgcgct cgccgacgat
     1321 ggtgtcgtag gcgatgagca ggccgatcag tggaatcacg aacgcgccga gcgtggtcag
     1381 gctggccagc gtcgcgtcga acgaggtgaa gccgacccgg ccggcagcgg cgccgccaaa
     1441 ccaggcgatc ccgagtgcca gcagggcgaa caacacggtc agggcgaccg tccagcgatt
     1501 gcggaagtcg tcccggaatt ccttccatgc gacggtgagt atcgcgttca tgcgcgggtc
     1561 tcctgcgggc gctcgggact ggcgccgagc cagtcgtaaa gttgcgtcaa ggtgggttcg
     1621 tgcacgtcga ggtcggcgat cgcggggtcg tccaccagct cgcgcagtgc gcgcagcttg
     1681 gccgcgcgcg gcagctccag ctccagccgt ccgtcgggcc gcggcagggc cgacaactgg
     1741 cggctggcca ggcgcgccag cagttcgcgt actgcgttct cgtacggccg cagcaacacg
     1801 cgcgcgggca gggacgcctg ttcgccgagc tcggccaggc tgcccgcggc gagcaggcgc
     1861 ccctggcgca ggatcagcgc gccgtccacg tgtggctcaa gttccgccag cagatgggag
     1921 gagatcacga cgctgcgacc atcggcgcgc agctcgccga cgatgcggta caactcgcgg
     1981 ctggcctgcg ggtccagtcc ggtggtgggc tcatccagca gcagcagttc cggctcaccc
     2041 agcagcgcct gcgcgagtcc caggcgctgg cgcatgccct tggaataggt gccgatgcgg
     2101 cgcttcgcgg cgtccgcaag gccgacccgt tccagcagcg cttgcacctg gctgcgttgg
     2161 gcgcgtttca gcttcgcgag gtagtccagc agttcgcgcc cggtgagatt ggggtagaac
     2221 gcggcgttct cgggcaggta gccaatgcgc agccgcaatg cgggcgcgcg ccacggatcg
     2281 cggcccagca cttcgaggcg gccggcgctg ggcgcgatca acccgaggat cagcttgatg
     2341 agcgtggact tgcccgcgcc gttgtggccg agcaggccga tcacctgtcc atgcgggacg
     2401 ccggcgctga cattgtccaa ggcggtgagt gcgccgtagc gcttggtcaa tccctcgaaa
     2461 tcaattgcgt gcgacatgtt cgggtccgga aggggtgggg gcgtgcatca gcgggtggct
     2521 gtcctgcacc gacggcggcg tgaacacggg gaaggcgcgc tgcacgtagc gcagcagcag
     2581 gatcgccggg ctggacatca ggctgcgcgc ggacgggtat ttccatagca gcacatcgac
     2641 gccatcgttc ggtcggaacg gaacgtcgcc gatgccgtcg ccgtccagat cccagccaag
     2701 gtaatcactc cagtagttgc cgcgccggtc gaccgaccat tcctgcgcga ggttctgcac
     2761 gtacttcacc tgcacgcggt tggcgacgaa gcgattggcc cacaggcggt tgtgctccga
     2821 acccgcggtc acgtggatgc cgatctccga attcgcgatc acgttggcgt ggaaatcgtt
     2881 gaactgcgac aggtacacga acacgccctt gccttcgccg ccgtcgagcg tgccgccatc
     2941 cgcgccgcgc agccccgtga tgcgccgcgc ctcgttgtcg ctgaaccggc tgtgggagat
     3001 gtagttgagc aggaagccgt acgactggtc gtcctcggcg atgttgccgg tcacctgcag
     3061 gtggtctgag gacatcagcg cgaagccggc cacgttgccg cggctggtgt tgtcgcgcag
     3121 cacgttgtgg ttcgagtaca tgtagtgcac accgtaacgg acgtgctgca ccgtgttgcg
     3181 gatgaaggcg ttgttggaac tgacgtacac gtagatcccg tcgcgcgagc cgacgatgtc
     3241 gttgccctcg atggtgcaac cggtgtcgtt ccacatgtgg atgccgtcac cgcggtcgga
     3301 tgcctgcagc gaatgcaggc cgcggatcac gttgttcgtg acctgcacgt ttgcggggcc
     3361 gtcgaggtag acgccgaaca gcgtgtcctc gatgcggttg tggtcgagcg tcacgtcgcg
     3421 tgccttctgc tccacgaaga tgccggcgtt ctcggcggtg aggtcggtgc cgctgcggcg
     3481 cagcgtgagc ccccgcaccg tcacgttggc cgcgccgatg cgcagcacgt cgccgctgcc
     3541 gccggcgtcg aggaccgcgc cgggcgcgcc aaccagcgtg accggtttgt ccaggcgcag
     3601 gccgcgcacc gcgtgcacgc cggtcggcac gcgcaccgtc gcaccgggcg gggccgcggc
     3661 gatcaacgcg gccagcggtt cctgcgcgcg tgaggacgcc gccagcggca gtgccaggac
     3721 caaggccatc aggagggtgg ggg
//
LOCUS       DASSVL010000012         3855 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_536960, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000012 DASSVL010000000
VERSION     DASSVL010000012.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3855)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3855)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3855
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_536960"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..253)
                     /locus_tag="VFM52_00210"
     CDS             complement(<1..253)
                     /locus_tag="VFM52_00210"
                     /inference="COORDINATES: protein motif:HMM:NF013502.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0008984 - protein-glutamate methylesterase
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheB"
                     /protein_id="HET8763620.1"
                     /translation="MPWPARTAWCRRPCRVHAAGRRPAPVPAQPRPRPRAVSRFAAIV
                     IGCSAGGPDALCRVLGGLDSHLPQAIIACCHTGSETVELL"
     gene            complement(142..993)
                     /locus_tag="VFM52_00215"
     CDS             complement(142..993)
                     /locus_tag="VFM52_00215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019467123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008983 - protein-glutamate
                     O-methyltransferase activity [Evidence IEA];
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_process: GO:0032259 - methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein-glutamate O-methyltransferase CheR"
                     /protein_id="HET8763621.1"
                     /translation="MSQHADDAEVEAIELDLFVTAMQRRHGYDFSGYARASLLRRVRQ
                     LARDHGDGAIGALTRRLLREPALLPHLLAGLSVPASDMFRDPSVFRALREQALPLLAA
                     FPHITIWQAGCARGEEVYSLAILLEEAGLYERCRIFATDLSGDALDHAREGIYPLDAA
                     AQWSRNYLAAGGTRSLADYCQARYGLIKLDEHLRRHVTFAQHNLAGDGVFGEMQLVLC
                     RNVLIYFTTPLQQRCLALFRAALVRGGVLCLGLREQPGAAGLAAFTPLDAGLRLYRRN
                     PDLGPAP"
     gene            complement(990..>3855)
                     /locus_tag="VFM52_00220"
     CDS             complement(990..>3855)
                     /locus_tag="VFM52_00220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008215780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HET8763622.1"
                     /translation="ELMNRLAAHDHAVEIRQTWRTDEIGQIARALQVFKDMVVHTRDD
                     AWLKTQVATITRQLQEATTHEAFGTCLVDALMPLLDAGVGLLYLHDETSGKLDVVGRY
                     GLRADADAATGPLPGAGLVNQCAASGTRIELDAIPPDYLRIESGGGAALPSHLVIEPV
                     RAGDTLVGVLEFATFTAPTPLQRRLLEQLLPAVAQTLDNLSRAVRTENLLEQTRDQAD
                     QLRVSSITLRQQREALGKTNDRLQAKTLELEAQSQRLQASEEELRVQAEELQASNEEL
                     RLQSDTLQEQKRTLEALQAETAEKADELARASQYKSEFLANMSHELRTPLNSLLILSR
                     SLAENRGQRLDAEEVESARIIHDAGSGLLALINDILDLSKIEAGKMELAVDDCALAAF
                     ARRLQRNFDHVARDKHLDFEVTMEDGLPQSLRTDPGKLDQIVNNLLANAFKFTAHGAV
                     RVRIGRPATDVAIPAALALQPLLAVAVSDTGIGVPADKQEKIFAAFEQVDAGTSRQYG
                     GTGLGLSISRRLAALLGGDILLHSESGRGSTFTLLLPETTAAATNVRAPPPAKPAAPK
                     AKRAGDAPILIVEDDPAFARILADLVRRKGLPLLQAGDGESALDLARSEHPAGILLDV
                     MLPGIDGWRVLDQLKADPATADIPVHFLSAADGAERSHASGAVGFLTKPATREEIETA
                     VERLLHGAGDRPRRVLLVAADARERAALRTLLQRDRVQVDEAADTATAQARLAQASCD
                     CIVLDLDLPDGSAAGLLEQLAAAGTLPSVVLTTARQPGAEETLQLRQYTDSIVVKGEQ
                     APQRLLDEVSLFLHRLHEPAGAAAPLLVNGLDGRRVLLVDDDMRNLFALSKLLRDWGL
                     AVTMAQDGPRALQVLQATTAPELVLTDIMMPGMDGYELIRHIRMLPVGATLPIIALTA
                     KAMRGDREQCLAAGASDYLAKPVDPDKLASVLRVWLRRPA"
BASE COUNT          556 a         1284 c         1409 g          606 t
ORIGIN      
        1 acaacagctc gacggtttcc gagccggtgt ggcaacacgc gatgatcgcc tgcggcaggt
       61 gcgagtcgag cccaccgagc acacggcaca gggcatcggg gccgccggcg gaacaaccga
      121 tcacgatggc cgcaaatctg ctcacggcgc ggggccgagg tcggggttgc gccggtacag
      181 gcgcaggcct gcgtccagcg gcgtgaacgc ggcaaggccg gcggcaccag gctgttcgcg
      241 caggccaagg cacagcacgc caccgcgcac cagcgcagcg cggaacaggg cgaggcagcg
      301 ctgctgcaac ggcgtggtga agtagatcag cacgttgcgg cacagcacga gttgcatctc
      361 gccgaacaca ccgtcgccgg caaggttgtg ttgtgcgaac gtgacgtgcc ggcgcaggtg
      421 ctcatcgagc ttgatcaggc cgtagcgcgc ctggcagtag tcggcgagcg agcgtgtacc
      481 gccggcggca agataattgc gcgaccactg ggccgcggca tccagcgggt agatgccttc
      541 gcgcgcgtgg tcgagggcgt cgccgctgag atcggtggcg aagatccggc agcgctcata
      601 cagcccggct tcctccagca ggatcgccag cgaatacacc tcctcgccac gcgcacaccc
      661 ggcctgccaa atggtgatgt gcggaaaggc ggcaagcagc ggcagcgcct gttcgcgcaa
      721 agcgcggaac accgacggat cgcggaacat gtccgacgcg ggcaccgaca ggccggccag
      781 caggtgcggc agcagcgccg gctcgcgcag caggcggcgg gtgagggcgc cgatggcgcc
      841 gtcgccgtgg tcgcgggcga gctggcgcac gcggcgcagc agcgaggcac gggcgtagcc
      901 ggagaagtcg tagccgtggc ggcgctgcat ggcggtgacg aacaggtcga gctcgatcgc
      961 ttccacctcc gcatcgtcgg cgtgctggct catgccggcc ggcgcaacca cacgcgcagc
     1021 accgaggcga gcttgtcggg atcgaccggc ttggcgagat agtcgctggc accggcggca
     1081 aggcactgct cgcggtcgcc gcgcatcgcc ttggcggtga gcgcgatgat cggcagcgtc
     1141 gcgccgaccg gcagcatgcg gatgtgccgg atcagctcgt agccgtccat gcccggcatc
     1201 atgatgtcgg tcagcaccag ctccggcgcc gtggttgcct gcagcacctg cagagcgcgc
     1261 gggccgtcct gtgccatggt taccgcgagg ccccagtcgc gcagcagctt ggacagcgcg
     1321 aacaggttgc gcatatcgtc gtccaccagc agcacgcggc ggccgtcgag cccgttgacc
     1381 agcagcggtg cggccgcacc cgcaggctcg tgcaggcggt gcaggaacag gctcacctcg
     1441 tcgagcaggc gctgcggcgc ctgctcgccc ttgaccacga tgctgtcggt gtactggcgc
     1501 agctgcaggg tttcctcggc gccgggttgc cgtgcggtgg tcagcaccac cgacggcagc
     1561 gtgccggccg cagccaattg ctccagcagc ccggcggcgg agccgtcggg caggtcgaga
     1621 tcgagcacga tgcagtcgca cgacgcttgt gccagccggg cctgtgcggt ggccgtatcc
     1681 gcggcttcat ccacctgtac ccggtcgcgt tgcagcaggg tgcgcagggc ggcacgctcg
     1741 cgggcgtccg cggcgaccag cagcacgcgg cgcgggcggt cgcccgcgcc gtgcagcagg
     1801 cgttcgacgg cggtctcgat ctcctcgcgg gtcgccggct tggtcaggaa gccgacggcg
     1861 ccggaggcgt gactgcgttc ggcgccatcg gcggcggaca ggaaatgcac cgggatgtcc
     1921 gccgtggccg gatcggcctt gagctggtcg agcacgcgcc agccgtcgat gccgggcagc
     1981 atcacgtcga gcaggatgcc ggcggggtgt tcgctgcgtg cgaggtcgag cgcgctttcg
     2041 ccatcaccgg cctgcaacag cggcaggccc ttgcggcgca cgaggtcggc aaggatgcgc
     2101 gcaaacgcag ggtcgtcctc gacgatcagg atcggcgcat cgccggcgcg cttcgccttc
     2161 ggcgccgccg gtttggcagg cggcggcgcg cgtacgttgg tggccgccgc ggtggtttcg
     2221 ggcaacagca gggtgaacgt gctgccgcga ccgctttcgc tgtgcagcag gatgtcgccg
     2281 ccaagcaggg ccgcgaggcg ccgcgagatg ctgaggccca ggccggtgcc gccgtactgg
     2341 cggctggtgc cggcgtccac ctgctcgaac gcggcaaaga tcttctcctg cttgtcggcc
     2401 ggaacgccga tgccggtatc gctgaccgcc accgccagca gcggctggag cgcgagggct
     2461 gccggtatcg ccacgtcggt ggccgggcgg ccgatgcgca cgcgcaccgc gccgtgggcg
     2521 gtgaacttga aagcgttggc gaggagattg ttgacgatct ggtcgagctt gcccgggtcg
     2581 gtgcgcaggc tttgcggcaa gccgtcctcc atggtcacct cgaaatccag gtgcttgtcg
     2641 cgcgcgacgt ggtcgaagtt gcgttgcagg cggcgcgcga acgcggccag cgcgcagtcg
     2701 tccaccgcga gttccatctt gccggcctcg atcttggaca ggtcgaggat gtcgttgatc
     2761 agcgccagca ggccgctgcc ggcgtcgtgg atgatgcgtg ccgactccac ctcctcggcg
     2821 tcgagccgct ggccgcggtt ctcggccagg ctgcgcgaca ggatcagcag gctgttcagc
     2881 ggcgtgcgca gctcgtgcga catgttggcg aggaattcgc tcttgtactg gctggcgcgc
     2941 gccagttcgt ccgccttctc cgcggtttcc gcctgcaggg cttccagcgt gcgcttttgt
     3001 tcctgcaggg tgtcactctg caggcgcagc tcctcgttcg aggcctgcag ctcctcggcc
     3061 tgcacgcgca gctcttcctc ggaggcttgc aggcgttgcg actgcgcttc gagctccaga
     3121 gtcttcgcct gcagccggtc gttggtcttg cccagcgcct cgcgttgctg gcgcaacgtg
     3181 atgctgctca cgcgcaactg gtcggcctgg tcgcgggttt gttcaagcag gttttcggtg
     3241 cgtaccgcgc gcgacaggtt gtccagcgtc tgtgccaccg ccggcagcaa ttgctccagc
     3301 agccgccgct gcaacggcgt gggcgcggtg aacgtggcga attcgagcac gccgaccagg
     3361 gtgtcgcccg cccgcacggg ttcgatgacg aggtggctgg gcagcgcggc gccgccgccg
     3421 gattcgatgc gcaggtaatc cggcgggatc gcatccagct cgatccgcgt gccgctggcg
     3481 gcacattggt tgacgaggcc ggcgccgggc agcggccccg tcgccgcgtc ggcatccgcg
     3541 cgcaggccgt agcggccgac cacatcgagt ttgccgctgg tttcgtcgtg caggtagagc
     3601 aggccgacgc cggcatcgag caggggcatc agggcatcga ccaggcacgt gccgaacgct
     3661 tcgtgggtcg tcgcctcctg caattgccgg gtgatcgtcg caacctgggt tttcagccag
     3721 gcgtcgtcgc gggtgtgtac caccatgtcc ttgaacacct gcagcgcccg cgcgatctgg
     3781 ccgatctcgt cggtgcgcca ggtctggcgg atttccaccg cgtggtcatg ggcagccagc
     3841 cggttcatca gctcg
//
LOCUS       DASSVL010000013         2520 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_169717, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000013 DASSVL010000000
VERSION     DASSVL010000013.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2520)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2520)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2520
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_169717"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>2520)
                     /locus_tag="VFM52_00225"
     CDS             complement(<1..>2520)
                     /locus_tag="VFM52_00225"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HET8763623.1"
                     /translation="PKVAPLASKKLIEEHKVFALLGYVGTPTGVAHLPVVTQARVPLV
                     GMFTGAEVLRVPFNRYIFHVRASYYDETEKIVEQVVSTGGRKISVFYQNDAYGEAGRK
                     GTEIALEKRKMKIHSQGTVERNTVAVQKAAKEIHATQPDAVVMVSAYTSIAAFVREMQ
                     KLGSGATFYNVSFVGSKALADALGKDGVGVAISQVVPFPWGTAVPVVKEYQQLAKKAG
                     HADYNFSALEGFLCAKVMVEGLRRAGRNPTREGLVEALEKMDVDMGGFFVSYSPKNRA
                     GSKFVDLTIISRDGKFLRYEAAMAFKMNLPFLKRGGEAASSASTGRRLQVLIAALVGL
                     LLVDAAVVWLDARQATFGTIYIATVGKIRMLSQRLAKAAQQASQGNLEAFAQLRDSRN
                     EFEAQMNLLLNGGQAAGGVSLPATSSEARPVLEALDAQWKRNDRNAKLVIAEQNNLLN
                     LGKSVRAINDRNPAVQELADEIAALSVQTGGSARQNAIAAQLMMLTQRIGKNAATMLA
                     EAQVDPEVSFLLGKDTNNFRDIVQGLLNGSEALRLPRVADPELRGKLGEMEAAFKEYQ
                     AAVSGILGNQQQLVNAKRASFDLFKDSEALLAAAENLNTAYEGELAERTLNFVILGVV
                     SFLALVVLLLIGKTYLDDSRRRADESERQNRENQAAIQRLLDEISNLANGDLTVHAQV
                     TEHMTGAIADSINYTIDELRRLVAGINSASLQVTSATQEAETVTSKLLQAAQKQAAEI
                     QGAGSSVAQMAQSMTEVSRKATDSSKVAESSVHAAQKGAQAVQNAIRGMNDIRVQIQE
                     TSKRIKRLGESSQEIGEIVQLISDITEQTNVLALNAAIQAA"
BASE COUNT          337 a          878 c          830 g          475 t
ORIGIN      
        1 acgcggcctg gatcgcggcg ttcagcgcca gcacgttggt ctgctcggtg atgtccgaga
       61 tcagctgcac gatctcgccg atctcctgcg agctctcgcc caggcgcttg atgcgcttgg
      121 aggtctcctg gatctgcacg cggatatcgt tcatgcctcg aatggcgttc tgcaccgcct
      181 gcgcgccctt ctgcgccgcg tgcaccgagc tctccgccac cttggaggag tcggtcgcct
      241 tcctcgacac ctcggtcatc gactgcgcca tctgcgccac cgaggagccc gcgccctgga
      301 tctcggcggc ctgcttctgc gcggcctgca gcagcttgct ggtcaccgtt tcggcttcct
      361 gcgtcgcgct cgtcacctgc agcgaggcgc tgttgatgcc cgccaccagg cggcgcagct
      421 cgtcgatcgt gtagttgatc gagtcggcga tggcgccggt catgtgctcg gtcacctgcg
      481 cgtgcaccgt gaggtcgccg ttcgccaggt tggagatctc gtcgagcagg cgctggatcg
      541 cggcctggtt ctcccggttc tggcgctcgc tctcgtcggc gcggcgccgg ctgtcgtcga
      601 ggtaggtctt gccgatcaag agcagcacca ccagggcgag gaacgacacc acgccgagga
      661 tcacgaagtt gagcgtgcgc tcggcgagct cgccttcata ggcggtgttg aggttctcgg
      721 ccgcggcgag cagcgcctcg ctgtccttga acaggtcgaa cgaggcgcgc ttggcgttca
      781 ccagctgctg ctggttgccg aggatgccgc tcaccgccgc ctggtactcc ttgaacgcgg
      841 cctccatctc gcccagcttg ccgcgcagct ccgggtccgc gacgcgcggc aggcgcagcg
      901 cctcgctgcc gttcagcagg ccctgcacga tgtcgcggaa gttgttggtg tccttgccga
      961 gcaggaacga cacctcgggg tcaacctgcg cctcggccag catggtggcc gcgttcttgc
     1021 cgatgcgctg cgtgagcatc atgagctgcg ccgcgatggc gttctggcgc gccgagccgc
     1081 cggtctgcac gctgagcgcc gcgatctcgt cggccagctc ctgcaccgcc gggttgcggt
     1141 cgttgatcgc gcgcaccgat tttccgaggt tgagcaggtt gttctgctcg gcgatcacca
     1201 gcttggcgtt gcggtcgttc ctcttccatt gcgcgtcgag cgcctcgagc accgggcgcg
     1261 cttccgagga ggtggccggc aggctcacgc cgcccgcggc ctggccgccg ttcaggagca
     1321 ggttcatctg cgcctcgaac tcgttgcggc tgtcccggag ctgcgcgaag gcctccaggt
     1381 tgccctgcga ggcctgctgc gccgctttcg cgaggcgctg cgacagcatg cggatcttgc
     1441 cgaccgtggc gatgtagatg gtgccgaagg tggcctggcg cgcgtcgagc cacaccaccg
     1501 cggcgtcgac cagcagcagg ccgaccagcg ccgcgatcag gacctgcagg cgccggccgg
     1561 tggaggccga gctggccgcc tcgccgccgc gcttgaggaa gggaaggttc attttgaatg
     1621 ccatggctgc ctcataacgc agaaatttgc cgtcacggga gatgatcgtc aggtcgacga
     1681 acttcgaccc ggcgcggttc ttcggcgagt agctgacgaa gaagccgccc atgtcgacgt
     1741 ccatcttctc gagcgcctcc accaggccct cgcgcgtcgg gttcctgccc gcgcgccgca
     1801 ggccttccac catcaccttc gcgcacagga agccctccag cgcgctgaag ttgtagtccg
     1861 cgtggcccgc cttcttggcg agctgctggt attccttgac caccggcacc gcggtgcccc
     1921 acgggaacgg caccacctgg gagatcgcca cgcccacgcc gtccttgccg agcgcgtcgg
     1981 cgagcgcctt cgagccgacg aacgagacgt tgtagaaggt cgcgccgctg ccgagcttct
     2041 gcatctcgcg cacgaacgcg gcgatcgacg tataggcgct caccatcacc acggcgtcgg
     2101 gctgcgtggc gtggatttcc ttcgccgcct tctgcaccgc gaccgtgttg cgctccacgg
     2161 tgccctgcga gtggatcttc atcttgcgct tctccagcgc gatctcggtg cccttgcgcc
     2221 cggcctcgcc gtacgcgtcg ttctggtaga acaccgagat cttgcgcccg ccggtcgaca
     2281 ccacctgctc gacgatcttc tcggtctcgt cgtagtagct ggcgcgcacg tggaagatgt
     2341 agcggttgaa gggcacgcgc agcacctcgg cgccggtgaa catgccgacc agcgggaccc
     2401 tggcctgcgt caccaccggc aggtgcgcga ccccggtcgg cgtgccgacg tagccgagca
     2461 gcgcgaacac cttgtgctct tcaatgagct tcttgctcgc gagcggggcg accttgggct
//
LOCUS       DASSVL010000014         3476 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1102016,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000014 DASSVL010000000
VERSION     DASSVL010000014.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3476)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3476)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3476
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1102016"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(198..1499)
                     /locus_tag="VFM52_00230"
     CDS             complement(198..1499)
                     /locus_tag="VFM52_00230"
                     /EC_number="2.3.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011257990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046912 - acyltransferase activity, acyl
                     groups converted into alkyl on transfer [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="citrate synthase"
                     /protein_id="HET8763624.1"
                     /translation="MSVKPSLDQVTLAAADKSVVLPVQSPTLGNPCIDIAKLPKETGC
                     FTYDPGFTATAACKSAITYIDGDAGVLLYRGYPIEQLAKHSSFLEVAYLLMNGELPKP
                     AEFSAYADEITHHTMMHEAFKSFLGGFRHDAHPMAMLVGMLGSMASFYHNTLDLEDPE
                     QRRLAAIRLIAKVPTIAAACYRHSIGWPLRYPRNNLKYVDRFVHMMFEVPSEPLQMNP
                     VAAKALDLLFILHADHEQNASTSTVRLVGSTGANPYASIAAGITALWGPAHGGANEAV
                     LKQLEEIGTPDNVESAVLRAKDKNDSFRLMGFGHRVYKNFDPRAKIIREMCHQVLAEL
                     GVNDPLLDVAMKLEEAALKDEYFVQRKLYPNVDFYSGIIYKALGIPTEMFTVMFAIAR
                     TAGWVAHWLEQQEDPEAKIGRPRQIYTGQKIRHYVPIEQRQ"
     gene            complement(1644..1886)
                     /locus_tag="VFM52_00235"
     CDS             complement(1644..1886)
                     /locus_tag="VFM52_00235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017156869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type B 50S ribosomal protein L31"
                     /protein_id="HET8763625.1"
                     /translation="MKADIHPQYREVVFQDVTSDFKFLTRSTMASKETIKWEDGNEYP
                     LVKIEISSATHPFYTGQNKVMDTSGRIDKFKKRYAK"
     gene            complement(1968..2909)
                     /locus_tag="VFM52_00240"
     CDS             complement(1968..2909)
                     /locus_tag="VFM52_00240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016904706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016799 - hydrolase activity, hydrolyzing
                     N-glycosyl compounds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside hydrolase"
                     /protein_id="HET8763626.1"
                     /translation="MERIPLLIDTDPGVDDALALLMAFADARHDIVGLTIAAGNVGLA
                     HTVANALKLCEVAGRDDVPVFPGCAEPLLHAADDASYVHGRDGFGDTGYAPATRAAET
                     EHAALAILRLSHAHAGRLLLVALGPLTNIALALKLDPALPERVARCVVMGGAVTGRGN
                     VTPVAEFNAWFDPEAADIVFRAFPRIELADWEAVVRHGLPQAEAGEWMRSAGTPRAAF
                     YEAISRHTREWSQDRRGDRWHCADALAMALALAPEGAGPLPERPLDVELAHGLCRGAT
                     VVDWDRRLPGRAANAAILMEYDQARFEALVRQALGAA"
     gene            complement(2936..>3476)
                     /locus_tag="VFM52_00245"
     CDS             complement(2936..>3476)
                     /locus_tag="VFM52_00245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019300815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="helicase-related protein"
                     /protein_id="HET8763627.1"
                     /translation="LPGLRVALVHGRMAAREKQATMRAFKEGEVQLLVATTVIEVGVD
                     VPNASLMIVENAERLGLAQLHQLRGRVGRGSATSSCVLLYRAPLSALARQRLETMRAT
                     SDGFEIAEKDLALRGPGELLGTRQTGLAAFRLADLARDADLLPQVHALGDRLLAADPA
                     IADRIVARWVGGAARYAAA"
BASE COUNT          497 a         1173 c         1263 g          543 t
ORIGIN      
        1 cgaggacacc ggccacttca cgcaggtcgt gtggcgcggc acgaagcagg tcggctgcgg
       61 ccacgtcacg tgcaagggca acgatatctg ggtctgtaac tacgacccgg ccggcaactg
      121 ggaaggccag taccgcgaca acgtgcggcc gcgcggctgc cgctgaccgg cgccggcggc
      181 ctccgatcgc gacggcgcta ctggcgctgc tcgatcggaa cgtagtggcg gatcttctgg
      241 ccggtgtaga tctggcgcgg ccgcccgatc ttcgcctcgg gatcctcctg ctgctccagc
      301 cagtgcgcca cccagcccgc ggtgcgcgcg atcgcgaaca tcacggtgaa catctcggtc
      361 gggatgccca gcgccttgta gatgatgccg gagtagaagt cgacgttcgg gtagagcttg
      421 cgctgcacga agtactcgtc cttcagcgcc gcttcctcga gcttcatcgc cacgtcgagc
      481 agcggatcgt tgacgccgag ctcggccagc acctggtggc acatctcgcg gatgatcttc
      541 gcgcgcgggt cgaagttctt gtacacgcgg tggccgaaac ccatcaggcg gaagctgtcg
      601 ttcttgtcct tggcgcgcag taccgccgac tcgacgttgt ccggcgtgcc gatctcctcc
      661 agctgcttga gcaccgcctc gttggcgccg ccatgggcgg ggccccacag cgcggtgatg
      721 ccggcggcga tcgaggcata cgggttggcg ccggtggaac cgaccaggcg cacggtggag
      781 gtggacgcgt tctgctcgtg gtcggcatgc aggatgaaca gcaggtccag cgccttggcc
      841 gccaccggat tcatctgcag cggctcgctc ggcacctcga acatcatgtg cacgaagcga
      901 tcgacgtact tgaggttgtt gcgcggatag cgcagcggcc agccgatcga gtggcggtag
      961 cacgccgcgg cgatcgtcgg caccttcgcg atcaggcgga tcgcggccag gcggcgctgc
     1021 tccgggtcct cgaggtcgag ggtgttgtgg tagaagctcg ccatcgagcc gagcatgccg
     1081 accagcatcg ccatcgggtg cgcgtcgtgg cggaagccgc cgaggaagct cttgaaggcc
     1141 tcgtgcatca tcgtgtgatg cgtgatctcg tcggcgtagg ccgagaattc cgccggcttc
     1201 ggcagctcgc cgttcatcag caggtacgcg acctcgagga agctggagtg cttcgcgagc
     1261 tgctcgatcg ggtagccgcg gtacaggagc acgccggcgt cgccgtcgat gtaggtgatc
     1321 gcggacttgc aggcggcggt ggcggtgaac ccggggtcgt aggtgaagca gccggtttcc
     1381 ttcggcagct tcgcgatgtc gatgcagggg ttgccgagcg tgggggactg caccggcagg
     1441 accacggact tgtcggcggc ggccagggtc acctggtcga gggaaggctt gacggacacg
     1501 gttgtcgctc ctcgatgcga cgcgccggtc ttcgctcgcc gacgcgcaag ggggtcatcg
     1561 gaaagcggcc attatcgcag aaaacgcaaa cggccgccct cgggcggccg tcgcgggcgc
     1621 atgccctcgc gggcatgctg cgcttacttg gcgtagcgct tcttgaactt gtcgatgcga
     1681 ccgctggtgt ccatcacctt gttctggccg gtgtagaacg ggtgggtcgc cgacgagatc
     1741 tcgatcttga cgagcgggta ctcgttgccg tcctcccact tgatggtctc tttcgaggcc
     1801 atggtcgagc gggtgaggaa cttgaagtcc gaagtgacgt cctggaagac gacttcgcgg
     1861 tactggggat ggatgtcggc cttcatggcg gcaccggagg ttctgcggag taagctgcgt
     1921 attttagcca ccccggccgg tcgggcgcaa gccggcgggc gccgcgttca ggcagcgccg
     1981 agcgcctgcc gcaccagcgc ctcgaaacgg gcctggtcgt actccatgag gatcgcggcg
     2041 ttggcggcgc ggccgggcag gcgccggtcc cagtcgacca cggtcgcgcc ccggcacagg
     2101 ccgtgcgcca gctcgacatc cagcggccgt tccggcagcg gcccggcgcc ctccggcgcc
     2161 agcgccagcg ccatggccaa ggcgtcggcg cagtgccagc ggtcgccgcg gcggtcctgg
     2221 gaccattcgc gggtgtgccg cgagatcgcc tcgtagaacg ccgccctggg cgtcccggcc
     2281 gagcgcatcc actccccggc ctccgcctgg ggcagcccat ggcgcaccac cgcttcccag
     2341 tcggccagct cgatccgcgg gaaggcccgg aacacgatgt cggcggcctc ggggtcgaac
     2401 caggcgttga attcggccac gggcgtgacg ttgccgcgac cggtgacggc gccgcccatg
     2461 accacgcagc gcgcgacgcg ctccggcaag gcgggatcga gcttgagcgc cagcgcgatg
     2521 ttggtcaggg gcccgagcgc gaccaggagc aggcggccgg cgtgggcgtg cgagaggcgc
     2581 aggatggcca gcgccgcgtg ctcggtttcg gcggcccgcg tcgcgggcgc gtagccggtg
     2641 tcgccgaatc cgtcgcggcc gtgcacgtac gacgcatcgt ccgccgcatg cagcagcggc
     2701 tccgcgcatc cggggaacac gggcacgtcg tcgcgccccg ccacttcgca cagcttcagc
     2761 gcgttggcga cggtgtgggc caggccgacg ttgccggcgg cgatggtcag cccgacgatg
     2821 tcgtgccgcg cgtcggcgaa ggccatcagc agggccagcg cgtcgtcgac gcccgggtcc
     2881 gtgtcgatca gcagcgggat gcgttccatc gcgggagtgt accggtcccc ggcgatcagg
     2941 cggcggcgta gcgggcggcg ccgccgaccc agcgcgccac gatccggtcg gcgatcgccg
     3001 ggtcggccgc gagcagccgg tcgcccagcg catgcacctg cggcagcagg tcggcgtcgc
     3061 gcgccaggtc ggcgagccgg aacgcggcca gcccggtctg gcgggtcccg agcaattcgc
     3121 ccggcccgcg cagcgcgagg tccttctccg cgatctcgaa gccgtcgctg gtggcgcgca
     3181 tggtttccag gcgctgccgc gccagcgccg acagcggcgc gcgatacagc agcacgcagc
     3241 tcgacgtggc gctgccgcgc ccgacgcgcc cgcgcagctg gtgcagctgc gccaggccga
     3301 ggcgctcggc gttctcgacg atcatcagcg aggcgttggg cacgtccacg cccacctcga
     3361 tcacggtcgt ggccaccagc agctgcactt cgccttcctt gaaggcgcgc atcgtcgcct
     3421 gcttctcgcg cgcggccatg cggccgtgca cgagggcgac gcgcaggccg ggcagc
//
LOCUS       DASSVL010000015         3208 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1214969,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000015 DASSVL010000000
VERSION     DASSVL010000015.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3208)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3208)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3208
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1214969"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..502
                     /locus_tag="VFM52_00250"
     CDS             <1..502
                     /locus_tag="VFM52_00250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018971341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HET8763628.1"
                     /translation="RLGKPVIARIQGYALGGGLELAMACHLRVAGERAKLGQPEINLG
                     LIPGFGGTQRLLRLVGRGAALELCLTGAPISAQRAHEIGLVNRVVPDDTLDATVDALA
                     DQLAAAAPLAAAGILDAILHGGEAALDQGLEFETQGFALMFATQDMREGTQAFLAKRK
                     PAFKGE"
     gene            complement(518..1435)
                     /locus_tag="VFM52_00255"
     CDS             complement(518..1435)
                     /locus_tag="VFM52_00255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008210955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1684 domain-containing protein"
                     /protein_id="HET8763629.1"
                     /translation="MLRIVTSLALLAGVATVSATETPSAYTHEIEQWRAARVARLTAP
                     DGWISLVGLDWLRAGANRVGSAADNDIVLTTGPAHLGTVTLAADGTTRIVLAPDSAAT
                     IDGKPAREAVLVDDLHAAPDATPTTVRFGDASFFVIDRDGRKALRVKDADAEARRHFA
                     GIDYFPIDPTWRIEADWVPFAPARQLEMGTAIGTIDKVSVPGKAVFTRDGHTFELLPY
                     QEEPGGELFFVLADRTSGKETYGAARFLYAALPTDGLGRPGKLVLDFNRAYNPPCAFT
                     PFATCPLAPPENRLDLAVTAGEKKYRGGH"
     gene            complement(1509..>3208)
                     /gene="mutL"
                     /locus_tag="VFM52_00260"
     CDS             complement(1509..>3208)
                     /gene="mutL"
                     /locus_tag="VFM52_00260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008439285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0032300 - mismatch repair complex
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0030983 - mismatched DNA binding [Evidence
                     IEA];
                     GO_process: GO:0006298 - mismatch repair [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="DNA mismatch repair endonuclease MutL"
                     /protein_id="HET8763630.1"
                     /translation="VEIEQGGGRLIRVRDDGGGIAADELPLAVAAHATSKIGSFDDLE
                     HVASMGFRGEALASMASVSHFALTSRLRGSEHAFRIEVDGGAMRAARPAQHPPGTSVE
                     VRDLFYNVPARKKFLRAERTEFAHIDDLLKSLALARGEVEFRLSHNGKPVRVWKPARD
                     AAARLVRVADVLGAEYPARSLRVDHAAAGLRLAGWVGLPTASRAQADQQFFYVNGRLV
                     RDRIVAHAVRQAYADVLFHGRQPTFVLYLELDPAGVDVNVHPAKHEVRFREQRLVHDF
                     LFRTLSEALAHTSAGEVESHAQLDDDRLRMGAGNVAVPPGLPAAAHGAVWPSHASQNR
                     LALGVRDAPLATYAAILGEAPALPAAPTSLPASEPGEAPPLGYAIAQLKSIYVLAENA
                     QGLVLVDMHAAHERITYERFKAGRAASNLRSQLLLVPLTLAVSAREAAAAEEHAEALA
                     GWGLELSRSGPSSVVVRRVPALLEGADVAQLARDVLAELAQHGSSRRLQELENELLST
                     MACHGSVRAGRRLTLPEMNALLREMEATERSGQCNHGRPTWTQLSMGELDRLFMRGR"
BASE COUNT          474 a         1161 c         1125 g          448 t
ORIGIN      
        1 acggctcggc aagccggtga tcgcgcgcat ccagggctac gcgctgggcg gcggactgga
       61 actggcgatg gcctgccacc tgcgcgtcgc cggcgagcgg gcgaagctcg gccagccgga
      121 aatcaacctc ggcctgatcc ccggctttgg cggtacccag cgcctgctgc ggctggtcgg
      181 acgcggcgcg gcgctggagc tgtgcctcac cggcgcaccg atcagcgcgc agcgcgccca
      241 cgagatcggc ctggtcaacc gcgtggtgcc ggacgacacg ctggacgcca ccgtcgacgc
      301 gctggccgac caactggcgg ccgccgcgcc gctcgccgcc gccggcatcc tcgacgccat
      361 cctgcacggc ggcgaagccg cgctggatca agggctcgaa ttcgagaccc agggctttgc
      421 gctgatgttc gccacgcagg acatgcgcga aggcacgcaa gcgttcctcg ccaagcgcaa
      481 gcccgccttc aagggagagt gacctgcgcg gcgcggctca atgcccgccg cggtacttct
      541 tctcgccggc cgtcaccgcg agatcgaggc gattttccgg cggcgccagc gggcaagtcg
      601 cgaacggagt gaacgcacac ggcgggttgt aggcgcggtt gaaatcgagc accagtttgc
      661 cggggcggcc gagcccgtcg gtcggcagcg ccgcatacag gaaccgcgcc gcgccgtagg
      721 tttccttgcc cgaggtgcgg tcggccagca cgaagaacag ctcgccgccg ggttcctcct
      781 ggtacggcag cagctcgaac gtgtggccgt cgcgggtgaa caccgccttg cccggcacgc
      841 tcaccttgtc gatggtgccg atcgcggtgc ccatctcgag ctggcgtgcc ggcgcaaacg
      901 gcacccagtc ggcttcgatc cgccatgtcg ggtcgatcgg gaaataatcg atgccggcaa
      961 aatgccggcg ggcctcggca tcggcatcct tgacgcgcaa cgccttgcgc ccgtcgcggt
     1021 cgatcacgaa aaagctggcg tcgccaaagc gcacggtcgt cggcgttgcg tccggggcgg
     1081 cgtggagatc gtcgaccagc accgcctcgc gcgccggctt gccatcgatg gtggcggcgc
     1141 tgtccggcgc cagcacgatg cgcgtcgtgc cgtcagcagc aagcgtgacc gtgccgagat
     1201 gcgccgggcc ggtggtgagc acgatgtcgt tgtccgctgc gctgccgacg cggtttgcac
     1261 cggcgcgcag ccaatccagc ccgaccaggc tgatccagcc gtccggcgcg gtcagccgcg
     1321 ccacgcgcgc ggcgcgccac tgctcgatct catgggtgta ggcggacggc gtttcggtgg
     1381 cagacacggt ggcaactccg gcaagcaagg caaggctggt gacgatgcgc aacatgggtg
     1441 tgatcgttcg cggcgggagc cacgagtatg gacgtccaaa cgccgacgcg gcaacccagg
     1501 ctcctggctc agcgcccgcg catgaacagg cggtcgagct cgcccatcga cagctgggtc
     1561 cacgtcgggc gcccgtggtt gcactggccg gagcgctcgg tggcttccat ctcgcgcagc
     1621 agggcgttca tttccggcag cgtcaggcgc cgccccgcgc gcaccgaacc atggcacgcc
     1681 atggtcgaca gcagttcgtt ctccagctcc tgcaggcgac gcgaactgcc gtgctgggcc
     1741 agctcggcga gcacgtcgcg cgcgagctgc gcgacgtcgg cgccttcgag cagcgccggc
     1801 acccgccgca ccaccacgct ggacggcccg ctgcgcgaaa gctccaggcc ccagccggcc
     1861 agcgcctcgg catgctcctc ggcagccgcc gcctcccgtg cgctgaccgc cagcgtcagc
     1921 ggcaccagca gcaattgcga gcgcaggttg ctcgccgcgc gcccggcctt gaaccgctcg
     1981 taggtgatgc gctcgtgcgc cgcgtgcatg tcgaccagca ccagcccctg ggcattttcc
     2041 gccagcacgt agatgctctt gagctgggcg atcgcatagc cgagcggcgg cgcctcgccg
     2101 ggttcgctgg cgggcaacga cgtcggcgcg gcgggcagcg ccggcgcctc gccgaggatc
     2161 gccgcgtagg tcgccagcgg cgcatcgcgc acgcctagcg ccaggcggtt ctggctggcg
     2221 tggctgggcc acaccgcgcc atgcgcggca gccggcaggc cgggcggcac cgccacattg
     2281 ccggcgccca tgcgcaggcg gtcgtcgtcg agttgcgcgt gcgattccac ctcgccggcg
     2341 ctggtgtgcg ccaacgcctc gctcagggtg cgaaacagga aatcgtgcac caggcgctgc
     2401 tcgcgaaagc gcacttcgtg cttggccgga tgcacgttga cgtcgacccc ggccggatcg
     2461 agttcgaggt acagcacgaa cgtgggctgg cggccgtgga acagcacgtc ggcgtacgcc
     2521 tgacgcaccg cgtgcgccac gatgcgatcg cgcaccaggc ggccgttgac gtagaagaac
     2581 tgctggtcgg cctgcgcccg cgacgcggtc ggcaacccga cccagccggc caggcgcaaa
     2641 ccggccgcgg cgtgatccac ccgcaggctg cgtgcggggt attccgcgcc gagcacgtcg
     2701 gccacccgca ccaaccgggc agccgcatcg cgcgccggct tccacacgcg caccggcttg
     2761 ccgttgtggc tgagccggaa ctcgacctcg ccgcgcgcca gcgccagcga cttcagcagg
     2821 tcgtcgatgt gcgcgaactc ggtgcgttcg gcgcgcagga acttcttgcg cgccggcacg
     2881 ttgtagaaca ggtcgcgcac ttcgacgctg gtgccgggcg ggtgctgcgc cgggcgcgcc
     2941 gcgcgcatgg cgccgccatc gacctcaatg cggaacgcgt gctcgctgcc gcgcagccgc
     3001 gaggtcagcg caaagtgcga caccgacgcc atcgacgcca gcgcctcgcc gcgaaaaccc
     3061 atgctggcga cgtgttcgag atcgtcgaag ctaccgatct tgctggtggc atgcgcggcg
     3121 accgcgagcg gcagctcgtc ggcggcgatg ccgccgccat cgtcgcgcac gcggatcagc
     3181 cggccaccgc cctgctcgat ctcgacct
//
LOCUS       DASSVL010000016         3928 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1285710,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000016 DASSVL010000000
VERSION     DASSVL010000016.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3928)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3928)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3928
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1285710"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(41..2932)
                     /gene="infB"
                     /locus_tag="VFM52_00265"
     CDS             complement(41..2932)
                     /gene="infB"
                     /locus_tag="VFM52_00265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007513227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003743 - translation initiation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006413 - translational initiation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-2"
                     /protein_id="HET8763631.1"
                     /translation="MADMTINKLADAVGMPVDKLLSQLGEAGMKFSDPDQVISSTDKV
                     KLLGFLRRTHGRGATPAAAAAATESTPRQITLRRRTVGELKVSTPGGRGSASTSKTVN
                     VEVRAKRTYVKRSVIAEEAGAEPEREEAARKLAESREQRKQEAIERAAAEQRRLEAAQ
                     QRDEQQRKQAEPVAPAPAAEPEAAPVVEDAPKPAAAAPVAVEPSPSPESVPEPAAKPA
                     TKAAGKSAGKVAAPKAAVPAPAEPTPATHEQHVVEHVGTDAPATIERLDPRELGMIVP
                     HVYEPRKREKVVKPAAPAPAPVHATPSSGSSDARGKARHGRDRGEAGDGKRFGTGQLH
                     LSEADRAKRSSGKRGRTGRGATREAARGAAAGAHGFTRPTTAVVHEVVVGDANAVSDL
                     AQKMAVKGAEVVKALFKMGVMATINQTIDHDTAVLVVEELGHKVVEANANDAEAVLAA
                     HTQTAELEGEKEPRPPVVTIMGHVDHGKTSLLDFVRRTKVASGEAGGITQHIGAYHVK
                     TSRGVITFLDTPGHAAFTAMRARGAQSTDIVVLVVAADDGVMPQTIEAVEHARAAKVP
                     LIVAMNKMDKPTANPDHVKQELANIQVIPEDWGGDTQFIPVSAKTGQGVEELLEAISV
                     QAEVMELAAVVDGPASGVVIESSLDKGRGPVATVLVQQGTLNRGDFVVCGIEYGRMRA
                     LVDETGKRVQSAGPSIPVQVLGLSGVPEAGDDFVAVADEKLAKQVAEERHQKRRETRM
                     VSKANRLEDIMAQMGQGNDQQTLNILVKADVQGSVEALRESLSAIGNENVKVNVIASG
                     VGGITESDATLAAASKALLIGFNVRADASARKVIETSGLDVRYFSIIYDVIDQVKQAA
                     SGLLGVEVREEIIGIAEVREVFRSSKFGAVAGCMVTEGHVTRSKPIRVLRDHTVIFEG
                     ELESLRRFKDLVDEVRSGMECGIAVKQYNDVKVGDQIECFERTEVARTL"
     gene            complement(3059..>3928)
                     /locus_tag="VFM52_00270"
     CDS             complement(3059..>3928)
                     /locus_tag="VFM52_00270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019466190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_process: GO:0006353 - DNA-templated transcription
                     termination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusA"
                     /protein_id="HET8763632.1"
                     /translation="FKLEVPEVGQGLVEIKGAARDPGDRAKIAVLAHDHRTDPIGACI
                     GMRGSRVQAVSNDLNGERVDIILWHENQAQYVINAMAPAEVQSIIMDEDKHSMDIAVA
                     EDKLSQAIGRGGQNVRLASKLTGWQLNVMTQDQVTAKSEAEQDAARALFMDKLEVDQE
                     IANILVQEGFSSVEEIAYVPSAELLAIEGFDEDIVEELRARARDALLTEALAVEETAD
                     EHQPSEELLALEGMDEATAYTLAERGVVSVEDLADQAVDDLIDIEGMTEEHAAALIMA
                     ARKPMIEQLEKGG"
BASE COUNT          510 a         1418 c         1257 g          743 t
ORIGIN      
        1 tccctatttc ccgctcgtac gctgcgagcg ccgtcggcgc ttacagcgtg cgagcgacct
       61 cggtacgctc gaagcactcg atctggtcgc cgaccttgac gtcgttgtac tgcttgacgg
      121 caatgccgca ttccatgccg ctgcgcacct cgtccaccag gtccttgaag cggcgcaggg
      181 attccagctc gccctcgaag atcacggtat ggtcgcgcag cacgcggatc ggcttgctgc
      241 gggtgacatg gccttcggtg accatgcagc ccgccaccgc gccgaacttg gaactgcgga
      301 acacctcgcg cacctcggcg atgccgatga tctcctcgcg cacctcgaca ccgagcaggc
      361 cggacgccgc ctgcttcacc tggtcgatca cgtcgtagat gatcgagaag tagcgcacgt
      421 cgagaccgga ggtctcgatc accttgcgcg ccgaggcatc ggcacgcacg ttgaagccga
      481 tcagcagcgc cttggacgcg gccgccagcg tggcgtcgga ttcggtgatg ccgccgacgc
      541 cggaggcgat cacgttgacc ttgacgttct cgttgccgat cgcgctcagc gattcgcgca
      601 gcgcctcgac cgaaccctgc acgtcggcct tgaccaggat gttgagcgtc tgctgatcgt
      661 tgccctggcc catctgcgcc atgatgtcct cgagccggtt ggccttggac accatgcgcg
      721 tctcgcggcg cttctggtgg cgttcctcgg ccacctgctt ggcaagcttc tcgtcggcga
      781 cggcaacgaa gtcgtcgccg gcctcgggta cgccggaaag gccgagcacc tgcaccggga
      841 tcgacggccc cgcggactgc acgcgcttgc cggtctcgtc gaccagcgcg cgcatgcggc
      901 cgtattcgat gccgcacacc acgaagtcgc cgcggttgag cgtgccctgt tgcaccagca
      961 ccgtcgccac cgggccgcgg cccttgtcca ggctggactc gatcaccacg ccggaagccg
     1021 ggccatcgac gaccgcagcc agctccatca cctcggcctg caccgagatt gcttcgagca
     1081 gttcttccac gccctggccg gtctttgccg acaccggaat gaactgcgtg tcgccgcccc
     1141 agtcctcggg aatcacctgg atgttcgcca gctcctgctt gacgtgatcc ggattcgccg
     1201 tgggcttgtc catcttgttc atggcgacga tcagcggcac cttcgccgcg cgggcgtgct
     1261 ccaccgcctc gatcgtctgc ggcatcacgc cgtcgtcggc cgcgaccacc agcaccacga
     1321 tgtcggtgga ctgcgcgccg cgcgcgcgca tcgcggtgaa cgccgcgtgc ccgggggtat
     1381 ccaggaaggt gatgacgccg cgcgaggtct tcacgtggta ggcgccgatg tgctgggtga
     1441 tgccgccggc ttcgccggac gccaccttgg tacgccgcac gaagtcgagc agcgaggtct
     1501 tgccgtggtc gacgtggccc atgatggtga ccaccggcgg ccgcggttcc ttctcgcctt
     1561 cgagctcggc ggtctgggta tgcgccgcca gcaccgcctc ggcgtcgttc gcgttggcct
     1621 cgaccacctt gtggcccagc tcctcgacca ccagcactgc ggtgtcgtga tcgatggtct
     1681 ggttgatggt ggccatcacg cccatcttga acagcgcctt caccacctcg gcgcccttca
     1741 ccgccatctt ctgcgcgaga tcggaaacgg cgttggcgtc gcccaccacc acctcgtgta
     1801 ccaccgcggt cgtcggccgg gtgaagccgt gtgcgcccgc agccgcaccg cgcgcggctt
     1861 cgcgcgtcgc cccacgaccg gtgcgcccgc gcttgccgct ggagcgcttg gcgcgatcgg
     1921 cctcactcaa atggagttgg ccggtgccga aacgcttgcc atcgcccgcc tcgccgcgat
     1981 cgcggccatg ccgggccttg ccgcgcgcat cgctggaacc cgagctcggc gtcgcatgca
     2041 ccggggccgg cgcaggagcc gcaggcttca ccaccttttc gcgcttgcgc ggttcataga
     2101 catgcggaac gatcattccg agctcacgcg gatcgaggcg ctcgatcgtg gctggggcat
     2161 cggtgccgac gtgctcgacg acatgctgtt catgcgtggc cggggtcggt tccgccggcg
     2221 ccggcactgc ggccttgggc gcggcaacct tgcccgcgct cttgccggca gccttggttg
     2281 ccggcttggc agccggttcc ggcacggact ccggcgacgg cgacggttcg accgccaccg
     2341 gggcggcggc ggccggcttc ggcgcgtctt ccaccactgg cgctgcttcc ggctcggcgg
     2401 ccggggctgg cgccaccggt tcggcctgct tgcgctgctg ctcgtcgcgc tgctgcgcgg
     2461 cctccaggcg gcgctgctcg gctgccgcac gctcgatggc ttcctgcttg cgctgctcgc
     2521 gggattccgc cagcttgcgc gcggcctcct cgcgctccgg ctcggcgccg gcctcttcgg
     2581 caatgacgct gcgcttgacg taggtacgct ttgcgcgcac ctcgacgttg accgtcttcg
     2641 aggtgctggc gctgccacgt ccgcccggcg tcgacacctt gagttcgccc acggtgcggc
     2701 ggcgcagggt gatctggcgc ggcgtgcttt ccgtcgcggc ggcagccgcg gccggggtgg
     2761 cgccacgacc atgggtacgc cgcaggaagc cgagcagttt caccttgtca gtgctgctga
     2821 tgacctggtc cgggtcggag aatttcatgc ccgcctcgcc aagctgactg agcagcttgt
     2881 cgaccggcat gcccaccgca tcggcgagct tgttgatcgt catatccgcc atcgtgttcg
     2941 ttctccgcca ttcccgcgat tgtcgtccgt gccgctcagt gcgcacgcac accgccatcc
     3001 gtggtggaaa gcctcaagcc ttcctcgacg cacccgtccg gggtgctgcc gctcgcggtc
     3061 agccgccctt ttccaactgt tcgatcatcg gcttgcgcgc ggccatgatc agcgccgccg
     3121 cgtgctcttc ggtcatgcct tcgatgtcga tcaggtcgtc caccgcctga tcggccaaat
     3181 cctccacgct caccacgccg cgctcggcca gcgtgtacgc cgtcgcctcg tccatgcctt
     3241 ccagcgcgag caattcctcg ctcggctggt gctcgtcggc ggtttcttcc accgccagcg
     3301 cctcggtcag cagggcatcc cgggcacggg cacgtagctc ctcgacgatg tcctcgtcga
     3361 agccctcgat cgcgagcagc tcggcactcg ggacgtaggc gatttcctcg acgctggaaa
     3421 agccttcctg caccaggatg ttcgcgatct cctggtccac ttcgagcttg tccatgaaca
     3481 gcgcgcgcgc cgcgtcctgc tcggcctcgc tcttcgcggt gacctggtcc tgggtcatca
     3541 cgttgagctg ccagccggtg agcttggacg ccagacgcac gttctggccg ccgcggccga
     3601 tcgcctgcga gagcttgtcc tcggcgacgg cgatgtccat cgagtgcttg tcctcatcca
     3661 tgatgatgga ctgcacctcg gccggcgcca tcgcgttgat gacgtactgc gcctggttct
     3721 cgtgccacag gatgatgtcg acgcgctcgc cgttgaggtc gttcgacacc gcctgcacgc
     3781 gcgaaccgcg catgccgatg cacgcgccga tcgggtcggt gcggtggtcg tgcgcgagca
     3841 cggcgatctt ggcgcgatcg cccggatcgc gtgcggcgcc cttgatctcg acgagacctt
     3901 ggccgacttc cggcacttcg agtttgaa
//
LOCUS       DASSVL010000017         3216 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_310969, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000017 DASSVL010000000
VERSION     DASSVL010000017.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3216)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3216)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3216
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_310969"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1360)
                     /locus_tag="VFM52_00275"
     CDS             complement(<1..1360)
                     /locus_tag="VFM52_00275"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007082681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008745 - N-acetylmuramoyl-L-alanine
                     amidase activity [Evidence IEA];
                     GO_process: GO:0009253 - peptidoglycan catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HET8763633.1"
                     /translation="MTAAAWGAHAADVTGVRVWSDASHTRLVFDMTGKPDYQLDRGND
                     RVVVELARSQTAGNFAGLAARGLFRGLQQGRDGDRLQLTANMTPGSGVRSFVLAPDQG
                     GDHYRLVVDLLPGHGDGAAPSPTPTPANPASVAAVPAGQPGEAASAVPASTPVDVADT
                     APRRGAAVGNSRRMNQQAAALLNGERKVVVAIDAGHGGKDSGAIGPGGTMEKNVTLAV
                     ARDLAAVINRQPGMKAILTRTSDYFIPLAQRYQIARQHDADLFISIHADSYTSGDARG
                     SSVWVLSSRGKSSVAAQMLADRENSADLIGGVSLSDQSNGLAKVLLDMQQGWAVQASD
                     VVATNVLRALGQIGPTHRGYVERANFVVLRSPDVPSILVETAFISNPAEEAKLRDPNH
                     QKALADAVMSGVQRYFESTPPPGTWFAAQAARRRRRQQSAHEPAGCGAAQRRAQGGGG
                     DRC"
     gene            complement(1571..2032)
                     /gene="tsaE"
                     /locus_tag="VFM52_00280"
     CDS             complement(1571..2032)
                     /gene="tsaE"
                     /locus_tag="VFM52_00280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007508048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     ATPase subunit type 1 TsaE"
                     /protein_id="HET8763634.1"
                     /translation="MNERSWQLADEAATLAFGEGFARALHGNGMVIYLHGELGAGKTT
                     FARALLGAMEVRERVKSPTYTLIEGYDAQGRPAWHLDLYRIADPGELEWLGLDALSDP
                     AAVVLVEWPERGRGALPAADVTLHLAYAGDGRSARLEAHTPRGGELLAELR"
     gene            complement(2025..>3216)
                     /locus_tag="VFM52_00285"
     CDS             complement(2025..>3216)
                     /locus_tag="VFM52_00285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019465488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0052855 - ADP-dependent NAD(P)H-hydrate
                     dehydratase activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="NAD(P)H-hydrate dehydratase"
                     /protein_id="HET8763635.1"
                     /translation="REAWRGAGGTVHPWSTDDAVPDVDVHVDALYGTGLHRPPAVEVA
                     ALLTAIAATGKPVLALDVPSGLAADTGTVPGAVLCADVTVSFIAAKRGLHTGRAADTV
                     GVLELASLDLPATLWEGTQPDATLLAPGHLPPRSRTAHKGTSGHVLAIGGDRGMAGAI
                     RLCGEAALRAGAGLVSVATRAEHLLALNAARPELMAHGVANGAALAPLLARATVLALG
                     PGLGQGDWSCGLWRAVLASGKPLVLDADGLNLLTHESVTFVQPAVLTPHPGEAARLLG
                     CPVATIETDRFAAARALARRYHAVVVLKGAGSLVAAPEGATAVCPWGNPGMASGGMGD
                     LLTGVIAALMAQGCDAWRAACLGVGLHARAGDRAARHGERGLLATDLLAPLRALGNGP
                     DDDE"
BASE COUNT          470 a         1175 c         1109 g          462 t
ORIGIN      
        1 ggcatcgatc gccaccacca ccttgcgctc gccgttgagc agcgccgcag cctgctggtt
       61 catgcgccga ctgttgccga cggcggcgcc gcgccgcctg cgccgcgaac caggtgcccg
      121 gtggcggcgt ggattcgaag taacgctgca cgccgctcat caccgcgtcg gcgagcgcct
      181 tctggtgatt cgggtcacgc agcttggctt cttccgcggg attgctgatg aacgcggtct
      241 cgaccaggat cgagggcacg tcgggcgaac gcagcaccac gaagttggcg cgctcgacgt
      301 agccgcgatg ggtcgggccg atctgcccca gcgcgcgcag cacgttggtg gccaccacgt
      361 cgctggcctg caccgcccag ccctgctgca tgtccagcaa caccttggcc aggccgttgc
      421 tctggtcgct gagcgacacg ccgccgatca ggtcggcgct gttctcgcga tcggccagca
      481 tctgcgccgc caccgagctc ttgccgcgcg aggacagcac ccataccgag gagccgcgcg
      541 cgtcgccgct ggtgtaggag tcggcgtgga tcgagatgaa caggtcggcg tcgtgctggc
      601 gcgcgatctg gtagcgctgc gcgagcggaa tgaagtaatc gctggtgcgg gtgaggatcg
      661 ccttcatccc tggctgccgg ttgatgacgg cggccaggtc gcgcgccacc gccagcgtga
      721 cgttcttttc catcgtgccg ccggggccga tggcccccga atccttgccg ccatggccgg
      781 catcgatcgc caccaccacc ttgcgctcgc cgttgagcag cgccgcagcc tgctggttca
      841 tgcgccgact gttgccgacg gcggcgccgc gccgcggtgc agtgtcggcg acgtccactg
      901 gcgtacttgc cggcacggcg gaagcggctt cgcccggctg cccggctggc accgccgcca
      961 cgctcgccgg gttggcaggc gtcggcgtgg gcgacggcgc agcgccatca ccgtgccccg
     1021 gcagcagatc cacgacgagt cggtaatgat cgccgccctg atcgggggcc agcacgaagc
     1081 tgcgcacgcc actgccgggc gtcatgttcg cggtgagctg caggcggtcg ccgtcgcggc
     1141 cctgctgcag gccgcggaac aggccccgcg ccgcaaggcc cgcgaaattc cccgcggtct
     1201 ggctgcgcgc cagctcgacc acgacccggt cgttgccgcg atcgagctgg taatcgggct
     1261 tgccggtcat gtcgaacacc agccgcgtgt ggctcgcatc cgaccagacg cggacgccgg
     1321 tcacgtcggc cgcgtgcgcc ccccacgccg cagccgtcat cgccaaggcg acgacgaaac
     1381 tcttgcccag actgtgcagg cggatgcgca tgcggcgcat tgaatcccag acatcctgcg
     1441 attgcaaggg gttttccctt ggatatccgt aacctgcgtg cgatttgtca gttgatgtct
     1501 agctatgcca tgcagacgga cgcatcggcc tcgacgcggc aaaccattga tcggcaagga
     1561 gtcatgccac tcatcgcaat tcggccagca attcgccgcc acgcggggta tgcgcttcca
     1621 gccgcgcgct gcggccatca ccggcatacg ccaggtgcaa ggtgacgtcg gccgccggca
     1681 acgcgccgcg gccgcgttcg ggccattcga ccagcaccac ggcggctgga tcggacagcg
     1741 catccagccc cagccactcc agctcgccgg ggtcggcgat gcggtacagg tcgaggtgcc
     1801 acgccgggcg cccttgggcg tcgtaacctt cgatcaaggt gtaggtcggg ctcttgaccc
     1861 gttcgcgcac ctccatggcg ccgagcaagg cgcgggcaaa ggtggtcttg ccggcgccga
     1921 gctcgccgtg caggtagatc accatgccgt tgccgtgcag ggcccgggcg aagccttcgc
     1981 cgaacgccag ggtggcagcc tcgtcggcca gttgccagga acgctcattc atcatcgtcg
     2041 ggtccattgc ccagggcgcg cagcggcgcc agcagatcgg tggctagcag gccgcgctcg
     2101 ccgtggcgcg cggcgcggtc gccagcgcgt gcgtgcaggc cgacgccgag acaggcggcg
     2161 cgccacgcat cgcagccctg cgccatcagc gcggcaatca cgccggtcaa gagatcgccc
     2221 atgccgcccg acgccatccc ggggttgccc cacgggcaca cggcggtggc gccttccggc
     2281 gcggcaacca gactgccggc gcctttcagc acgacgacgg cgtgataccg gcgggccagc
     2341 gcacgcgcgg ccgcgaagcg atcggtttcg atcgtcgcca ccggacagcc gagcaggcgc
     2401 gcggcctcgc ccggatgcgg tgtcagcacg gcgggctgaa cgaacgtcac cgattcgtgc
     2461 gtcaggaggt tcagcccgtc ggcgtccagc accagcggct tgccgctggc cagcaccgca
     2521 cgccacagcc cgcagctcca gtcgccttgc cccagtcctg gcccgagcgc cagcacggtc
     2581 gcgcgcgcca gcagcggcgc cagcgcggcg ccattggcca cgccgtgcgc catcaactcc
     2641 ggccgcgccg cgttcaaggc cagcaggtgt tcggcccggg tcgccacgct gaccaggccg
     2701 gcgccggcac gcagcgcagc ctcgccgcac aggcggatcg ccccggccat gccgcgatcc
     2761 ccgccaatcg ccagcacatg gccgctcgtg cccttgtgcg cggtgcgcga tcgtggcggc
     2821 aagtgacccg gcgccagcag cgtggcgtcc ggttgggtgc cttcccacag cgtcgccggc
     2881 aggtcgagcg aggcgagttc gagcacgcca accgtatcgg cagcgcgccc ggtatgcagg
     2941 ccgcgctttg ccgcgatgaa gctgacggtg acatcggcgc acagcacggc gccgggcacg
     3001 gtgccggtgt cggcggccag gccggacggc acgtcgagcg cgagcaccgg tttgccggtg
     3061 gccgcgatgg ccgtcaacaa ggccgccacc tcgaccgccg gcggccgatg caggccggtg
     3121 ccataaagcg catcgacgtg cacatcgacg tccggcacgg cgtcatcggt cgaccaagga
     3181 tgcaccgtgc cgccggcgcc gcgccaggct tcgcgc
//
LOCUS       DASSVL010000018         4472 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_212128, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000018 DASSVL010000000
VERSION     DASSVL010000018.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 4472)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4472)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4472
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_212128"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1083
                     /locus_tag="VFM52_00290"
     CDS             <1..1083
                     /locus_tag="VFM52_00290"
                     /inference="COORDINATES: protein motif:HMM:NF023295.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3387 domain-containing protein"
                     /protein_id="HET8763636.1"
                     /translation="DYIGIGEELKKAIKQYTRGAGHDRDPVDVSGQVLAILLDTLDVI
                     RKAYFAGFDYAGFQDPRRALALLAAAVQHVTQVDPTLDDKGRNRGTQGYMDEVAKLTK
                     AQALAGTRREAMDVREEIAFFQAVRVTIIKLTRVGGRLSRLEKEAALRQLVAKGVLVD
                     GVNDIYRTLGLDRPDISMLDERFLAQIREMPTRNLAAELLARLIDDQVKARGQRNLLQ
                     GKEFTARLEEAINRYQNRALTTVEVIEELIKLAREINADRPPDGMTEEEYAFYQALAE
                     NESAVRELGHPALRALAHELTEKLRKSATINWQRRKDARAKMVAMVKVLLAIHKYPPD
                     KQPEATEKVLAQAELLADTWAAENRI"
     gene            1133..1999
                     /locus_tag="VFM52_00295"
     CDS             1133..1999
                     /locus_tag="VFM52_00295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019464821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PP2C family serine/threonine-protein
                     phosphatase"
                     /protein_id="HET8763637.1"
                     /translation="MDQAIDFQALPQVAAGRARGGRDTQQDALACLHDPASDTLLLVV
                     ADGMGGDGAGELAAAGVIDTTRRLWEQGRWRDAPGALFLESLCQEAHAELVRRREGLV
                     AGEPHSTVVALLVRGRQAYWAHVGDSRLYLFQGRHCLSRTEDHSVAQLKLRRGEITPE
                     QLARDPDQHKLLRGLGGASAPKVEHGGALLHPGQTFALCSDGVWEQLSTQELRRLSRR
                     RDQDGALHEALLLATARGGEQGDNVALIFMRVTGAGWMRRYGEKLWSAMHLTTVHGAG
                     GQNVAADNETGR"
     gene            2020..2895
                     /locus_tag="VFM52_00300"
     CDS             2020..2895
                     /locus_tag="VFM52_00300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008434053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0097367 - carbohydrate derivative binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysM domain-containing protein"
                     /protein_id="HET8763638.1"
                     /translation="MRIAALLVLAGTAGCAQMSSLKDKVNDRMSGSPKVTVERTAPET
                     EAAARPSSLGAIINGDLQRGRYAEGERALRQYLAAHPGDRTAQAMLHQLTADPVRELG
                     ARSRSYTVQPGDSYSTLAARYLGDAQRFVILARYNGSIDPSMLHAGQTLRLPLAAAAP
                     GVAAPAIAAGADTAPSDAAVTPGESAVAKARRLQRESVALLAQGHKDQALVQLDAALT
                     LDPHLKPSDPQAAALRQQLLASYHQRAIVLYRDQKLDPAIALWDRVLAIDPSYEPAVA
                     YRARALELKQRLKQF"
     gene            complement(2917..>4472)
                     /locus_tag="VFM52_00305"
     CDS             complement(2917..>4472)
                     /locus_tag="VFM52_00305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007511499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HET8763639.1"
                     /translation="HHHVAADTAYRQRFLAEARAAGHLVHPNIVTIFDAGEADNGRPY
                     IAMERLGGETLASRVASQGLPPLSVVIELASHMAAALNYAHEQGVIHHDIKPENIMLA
                     EGWHYAKLSDFGIAERRGAHAAGDEIGGTPAYMALERLRGEPADARSDLFSLGVVLYW
                     LITGKLPWRETADVPRLIRERQRLPHPAIEPLDPATPSMLVGIVRTLLSPTAAARYQN
                     GAEVIDDLRQARREHERLHEKPLANRIISLRLRWAGALGATLCLVLLLGLAAIYAKQN
                     TAVTGLALDFGGSLSRMIASEAAENLLLNDQAATRALVQDIAQNRQIHYLAVADRLGN
                     VVASTKPAEIGRSLPAPVGQKPLARGDGVDGLVASHGDDAMLLFDVPIRYQAKTVGEL
                     RLGVSSAPLRTAQRTTLWVILAVLLVTLAAVVGAAYWLFRRPFALLQMLSDALLRVGR
                     GDFRHRIRLVRRDELGQLFAAFNLMNSALQARQPDAAGPPTPARVEAEPAAQPTRIIP
                     PQGSGPDAS"
BASE COUNT          709 a         1513 c         1632 g          618 t
ORIGIN      
        1 gattacatcg gcatcggcga agagctgaag aaagccatca agcagtacac gcgcggggcc
       61 gggcacgacc gcgacccggt ggacgtgtcg gggcaggtgc tggccatcct gctggatacg
      121 ctggacgtga tccgcaaggc atatttcgcc gggttcgatt acgccgggtt ccaggatccc
      181 aggcgcgcgc tggcgctgct ggcggcggca gtgcagcacg tgacgcaggt cgatccgacg
      241 ctcgacgaca agggccgcaa ccgtggcacg cagggctaca tggatgaagt cgccaagctg
      301 accaaggcgc aggccctggc cggcacgcgg cgcgaggcga tggacgtgcg cgaggagatc
      361 gcgttcttcc aggcggtgcg cgtgacgatc atcaagctga cccgcgtcgg cggacggctg
      421 tcgcggctgg agaaggaagc cgcgctgcgc cagctggtcg ccaagggtgt gctggtggat
      481 ggcgtcaacg acatctaccg cacgctgggg ctggaccggc ccgacatcag catgctggac
      541 gagcggttcc tcgcgcagat ccgcgagatg ccgacgcgca acctcgcggc cgaactgctg
      601 gcacgcctga tcgacgacca ggtgaaggcg cgcggccagc gcaacctgct gcagggcaag
      661 gagttcaccg cgcggctgga agaggccatc aaccgctacc agaaccgcgc gctgacgacg
      721 gtggaagtga tcgaggagct gatcaagctg gcccgcgaga tcaacgccga ccggccgccg
      781 gacggcatga ccgaagagga atacgcgttc taccaggcgc tggccgaaaa cgaatccgcg
      841 gtgcgtgagc tgggccaccc ggcgctgcgc gcgctggcgc acgagctgac cgagaagctg
      901 cgcaagtccg cgaccatcaa ctggcagcgc cgcaaggacg cccgcgcgaa gatggtggcg
      961 atggtcaagg tgctgctggc catccacaag tacccgccgg acaagcagcc cgaggcaacc
     1021 gaaaaggttc tcgcccaagc cgagctgctt gccgacacct gggcggccga gaatcggatc
     1081 taggcgggtg ggagcggtag cgtcaggggc aactcgacca aaggggtgaa cgatggacca
     1141 ggcgatcgac ttccaggcct tgccgcaggt tgccgcgggc cgcgcccgcg gtggccgcga
     1201 cacgcaacag gatgcgctgg cctgcctgca cgaccccgcc agcgacaccc tgctgctggt
     1261 ggtggccgac ggcatgggcg gcgacggcgc gggagagctg gccgccgccg gcgtgatcga
     1321 caccacccgc cgcctgtggg aacagggccg gtggcgcgat gcgcccggcg cgctgttcct
     1381 ggaaagcctg tgccaggaag cgcatgcgga actggtccgt cgccgcgagg ggctggttgc
     1441 cggcgaaccc cattccaccg tggtcgcgtt gctggtccgc ggcaggcagg cgtactgggc
     1501 ccatgtgggc gacagccgcc tgtacctttt ccagggccgg cactgcctca gccgtaccga
     1561 ggaccacagc gtcgcccagc tcaagctgcg ccgcggcgag atcacgccgg agcaactggc
     1621 ccgggacccc gaccagcaca agctgctgcg cggactgggc ggcgcgtcgg cgcccaaggt
     1681 cgagcacggc ggcgcgctgc tgcacccggg gcagactttc gcgctgtgca gcgatggcgt
     1741 ctgggagcag ttgtccacgc aggaattgcg ccggctgtcg cgtcgccgcg accaggacgg
     1801 cgcgctgcac gaagccttgc tgttggcgac cgcgcgcggc ggcgagcagg gcgacaatgt
     1861 cgcgctgatc ttcatgcggg tcaccggcgc cggctggatg cgccgctatg gcgagaaact
     1921 ctggtccgcg atgcatctca ccacggtgca tggcgccggc gggcagaatg tggcggccga
     1981 caacgaaaca ggaaggtgat ggtgtttccg tatcgatcca tgcgtatcgc cgcgctgctg
     2041 gtcctggcgg gcaccgccgg ctgcgcgcag atgagttcgc tgaaggacaa ggtcaacgac
     2101 cgcatgagcg gctcgccgaa ggtcaccgtg gaacggacgg cgcccgagac ggaggcggct
     2161 gccaggccat cgtcgctggg cgcgatcatc aacggcgacc tgcagcgggg gcgctatgcc
     2221 gagggcgagc gcgccttgcg ccagtacctg gcggcgcatc ccggcgaccg caccgcgcag
     2281 gccatgctgc accagctcac cgccgatccg gtgcgcgaac tcggcgcacg ttcgcgcagc
     2341 tacacggtgc agcccggcga ctcctacagc acgctggcgg cacgctacct gggcgacgcg
     2401 cagcggttcg tgatcctggc gcgctacaac ggctcgatcg atccctcgat gctgcacgcc
     2461 ggccagacgc tgcgcctgcc gcttgccgcc gcggcgccgg gtgtggcggc accggccatc
     2521 gccgcgggcg cggatacggc gccgtccgat gcggccgtca cgcccggcga gtcggcggtg
     2581 gcgaaggcgc gccgcctgca acgcgagagc gtggccctgc tggcgcaggg gcacaaggac
     2641 caggcgctgg tgcagctcga cgcagcgctg acgctcgatc cacacctgaa acccagcgac
     2701 ccgcaggccg ccgccttgcg ccagcagttg ctggccagct atcaccagcg cgccatcgtg
     2761 ctgtatcgcg accagaagct ggacccggcc atcgcgttgt gggatcgggt gctggcgatc
     2821 gatccgtcct acgagcccgc ggtggcctat cgcgcccgtg cgctcgagct caagcagcgc
     2881 ctgaagcagt tctgagctgc ccggtccccg gacgcctcag gacgcgtccg gcccggagcc
     2941 ctggggcggg atgatgcgcg tcggctgcgc ggcgggttcc gcttcgacgc gcgccggagt
     3001 gggcggcccg gcagcgtccg gctggcgcgc ctgcagcgcg ctgttcatca ggttgaaggc
     3061 ggcgaacagc tggcccagtt cgtcccggcg caccagccgg atgcggtggc ggaagtcgcc
     3121 gcggccgacc cggagcaggg cgtcgctcag catctgcagc agggcgaacg gacgccggaa
     3181 cagccagtag gccgcaccga ccaccgccgc cagggtcacc agcaacacgg caaggatcac
     3241 ccacagcgtg gtgcgctggg cggtgcgcaa gggcgcgctg ctgacgccca ggcgcaactc
     3301 gccgacggtc ttcgcctggt atcggatcgg cacgtcgaat agcagcatgg cgtcgtcgcc
     3361 atggctggcg accaggccgt cgacgccgtc gccccgcgcc agcggcttct gcccgaccgg
     3421 tgcgggtagc gagcggccga tttccgcggg tttcgtactg gccaccacgt tgcccaggcg
     3481 gtcggcgacg gcgaggtaat ggatctgccg gttctgcgcg atgtcctgca ccagcgcacg
     3541 cgtggcggcc tggtcgttca gcagcaggtt ttccgccgcc tcgctcgcga tcatgcggct
     3601 cagcgaaccg ccgaaatcca gcgcgaggcc ggtgaccgcg gtgttctgct tggcatagat
     3661 cgcggccagg ccaagcagca gcaccaggca cagtgtggcg cccagcgcgc cggcccagcg
     3721 caggcgcaac gagatgatgc gattggcgag cggcttctcg tgcaggcgct cgtgttcgcg
     3781 gcgcgcctgg cgcaggtcgt cgatgacctc ggcaccgttc tggtagcgcg cggccgcggt
     3841 gggcgagagc agggtgcgca cgatgcccac cagcatcgac ggcgtcgccg ggtccagcgg
     3901 ctcgatcgcc gggtggggca ggcgctgccg ttcgcggatc agccgcggca cgtcggcggt
     3961 ctcgcgccac ggcagcttgc cggtgatcag ccagtacagg accacgccca gcgagaacag
     4021 gtcgctgcgc gcgtcggccg gttcaccgcg caggcgttcc agcgccatgt aggccggggt
     4081 gccgccgatc tcgtcgccgg cggcatgtgc gccgcgccgc tcggcgatgc cgaaatcgct
     4141 gagcttggcg taatgccagc cctcggccag catgatgttc tccggcttga tgtcgtggtg
     4201 gatgacaccc tgctcgtgcg cgtaattcag cgcggcagcc atatggctgg ccagttcgat
     4261 gaccaccgac agcggcggca ggccttggct ggcgacccgg ctcgccagcg tctcgccgcc
     4321 gaggcgctcc atcgcgatgt aggggcggcc gttgtcggcc tcgcccgcat cgaagatggt
     4381 cacgatgttc gggtgcacca ggtgtccggc cgcgcgggcc tcggcgagaa aacgctgccg
     4441 gtaggcggtg tcggcggcca cgtggtggtg ca
//
LOCUS       DASSVL010000019         2855 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_565302, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000019 DASSVL010000000
VERSION     DASSVL010000019.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2855)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2855)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2855
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_565302"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..369)
                     /locus_tag="VFM52_00310"
     CDS             complement(<1..369)
                     /locus_tag="VFM52_00310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008212736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015297 - antiporter activity [Evidence
                     IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HET8763640.1"
                     /translation="MSIDLGVVLTGLLVVGFFAQWLAWRLRLPAILFLLLIGIVLGPV
                     TGWFDPDKVLGDFLFPTVSLAVALILFEGSLTLRFSELRGIGRAVHGMVTYGAVLALV
                     LLAAAAHFIAGLRWEIAFLFG"
     gene            547..1560
                     /locus_tag="VFM52_00315"
     CDS             547..1560
                     /locus_tag="VFM52_00315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8763641.1"
                     /translation="MKIRLLPMLFVATLPACALAAAAPAAPQATITIPGGSHGIGFDD
                     IGFAAALDRVTVPAGATGNLVLVDPATNALTVIRRVSAPPADGKQRREGTTSAIDADG
                     YLFASDHDPVAIVTIDPRSHAIVARTPLQGGPDYLRYVARTHEIWATEPGKQQIQIFK
                     LTVAPRPVLTPETTLHIADGPESLEIDNARDRAYSNLWKGKTVAMSLTAHKVLAEWPN
                     GCKDSHGIALDTAHDHVFVACGDGKVVALAPADGGKVAATAQAGAGVDIISYSPRLHH
                     LYVPGAKAATLTILDVAASGAMQPLATYTTAPHAHCVTNDNRGHVFVCNPRAGTLLEI
                     DDH"
     gene            complement(1598..>2855)
                     /locus_tag="VFM52_00320"
     CDS             complement(1598..>2855)
                     /locus_tag="VFM52_00320"
                     /inference="COORDINATES: protein motif:HMM:NF028178.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="TAXI family TRAP transporter solute-binding
                     subunit"
                     /protein_id="HET8763642.1"
                     /translation="TLLIVALAAWLVLRFMQPPPRTVTISSGPVGSIFYNMAEKYRPI
                     LARNGITLKVLPSAGSLQNLERLADPHAGVDLALVQGGVTVTGDTGDIVSLGSLAYEP
                     LALFYRGKQPLVRLSQLQGRHIGVGAKGSGTRFLALALLKANGVMPDATTHFANIEGS
                     DAMHALLDGELGAIFLSGDSATPANFRTLLLAPGVRMFNFVQADAYVRRFRYLSKLEV
                     PAGTFDLGHNLPRQSTSLLAPTVELLAHRDLHPALVDLMIQAAREVNGRASVLQKAGE
                     FPSPQQRAWPISDEAQRFYKSGQTLLYRYLPFWLASLLSRTWLVLVPMIVVLVPALEF
                     APSLYGWLVKNRIYRRYGNLMALERAALEPLTPQQREELVVRLNAIETDIIGLKVPGA
                     YANEVYVLRQHLKFVRTRLDAATGQM"
BASE COUNT          551 a         1011 c          885 g          408 t
ORIGIN      
        1 accaaacagg aacgcgattt cccagcgcag cccggcaata aaatgcgccg ccgcggccag
       61 cagaaccaac gccagcaccg caccgtaggt gaccatcccg tgtaccgcgc ggccgatgcc
      121 gcgcagttcg gaaaaacgca gcgtcaggct gccctcgaac aggatcaggg caaccgcgag
      181 cgacaccgtc ggaaacagga aatcgcccag caccttgtcg ggatcaaacc agccggtgac
      241 cggccccagc acgatgccga tcagcagcag gaacaggatc gccggcaagc gcagccgcca
      301 ggcaagccat tgcgcaaaaa atccgaccac cagcaagccg gtcagtacca cgcccaaatc
      361 gatactcatg cggcctcgcg tcggcaatcc accgtcgatg gtaaccgcgc ctgtcggccg
      421 cgctgccggc accggcgttc agggcgagca aagccaacgc aaagcgacgc gtaccagcat
      481 gcgcaaatcg tcgctccgca ccacgcacgg gcaacacgcc atcatccagg atcaccggcc
      541 agcgccatga aaatccgcct gctccccatg ttgttcgtcg caacccttcc ggcttgcgcc
      601 ctcgccgctg cggcgcccgc cgcgccgcag gccacgatca cgattcccgg cggctcgcat
      661 ggcatcggct tcgacgacat cgggtttgcg gcggcgctcg atcgggtgac ggttccggcc
      721 ggcgcgaccg gcaatctggt gctggtggat cctgcaacga atgccctcac ggtcatccgc
      781 agggtcagcg cgccgccggc cgatggcaag caacgccgcg aaggtacgac ctcggcaatc
      841 gacgccgatg gctacctgtt tgcgagcgac cacgatccgg tggcgatcgt caccatcgat
      901 ccccgcagcc atgcgatcgt ggcacgcact ccgctgcagg gcggccccga ttacctgcgg
      961 tacgtcgcgc gcacgcacga aatctgggcg accgagcccg gcaagcagca gatccagatc
     1021 ttcaagctga ccgtggcgcc gcgcccggtg ctaacgccgg aaaccacgct ccacattgcg
     1081 gacgggccgg aatcgcttga aatcgacaac gcgcgcgacc gcgcctattc gaacctgtgg
     1141 aaaggcaaga ccgtcgcgat gtcactgacg gcgcacaagg tgttggccga atggccgaac
     1201 ggctgcaagg actcgcacgg gatcgcgctc gacaccgccc acgaccatgt gttcgtggct
     1261 tgcggcgacg gcaaggtcgt ggccctcgca cctgccgacg gcggcaaggt ggcggcaacc
     1321 gcgcaagccg gcgccggcgt ggacatcatc agctacagcc cgcgcctgca ccacttgtat
     1381 gtgcctggtg cgaaggcggc gaccctgacg atcctcgatg tcgccgcgtc cggcgccatg
     1441 cagccgctcg cgacctacac gacggcaccg cacgcgcact gcgtcaccaa cgacaaccgc
     1501 ggccatgtat tcgtatgcaa cccgcgcgcc ggcacgctgc tggaaatcga cgaccactga
     1561 ggggacagcg tcgatcaatg acgccgccgg ctgtcgccta catctggccc gtcgccgcat
     1621 ccagccgggt acgcacgaac ttcaggtgct ggcgcagcac atacacctcg ttggcgtagg
     1681 cgcccggcac cttcagcccg atgatgtcgg tctcgatggc gttcaggcgc acgaccagct
     1741 cctcgcgttg ttgcggcgtc agcggctcca gcgccgcccg ctccaacgcc atgaggttgc
     1801 cgtagcgccg gtaaatgcgg tttttgacga gccaaccgta gagcgacggc gcaaactcca
     1861 gcgccggcac cagcaccacg atcatcggca ccagcaccag ccacgtccgg ctcagcaggc
     1921 tggcaagcca gaacggcagg tagcgataca gcagcgtctg gccggatttg taaaagcgct
     1981 gcgcctcatc gctgatcggc cacgcgcgct gttgcggcga gggaaattcg cccgccttct
     2041 gcaacacgct ggcgcggccg ttgacctcgc gcgcggcctg gatcatcaga tccaccagcg
     2101 ccggatgcag atcgcggtgc gccagcaatt ccaccgtcgg tgccaaaaga ctggtggatt
     2161 gccgcggcag gttgtggccc aggtcgaacg tgccagccgg aacttcgagc ttgctgaggt
     2221 agcggaaccg ccgcacatag gcatccgcct gcacgaaatt gaacatccgc acgcccggcg
     2281 ccagcagcag agtacggaaa ttcgcgggtg tcgccgaatc gcccgacagg aagatcgcgc
     2341 cgagctcgcc gtcgagcaat gcgtgcatcg catcgctgcc ttcgatgttc gcgaaatggg
     2401 tggtggcatc gggcatgacg ccgttggcct tgagcaacgc cagtgccagg aaccgcgtac
     2461 cgctgccctt ggcgccgacg ccgatgtgcc gcccctgcaa ctgcgacagg cgcaccagcg
     2521 gctgcttgcc gcggtagaac aatgccagcg gctcgtacgc gaggctgccg agcgacacga
     2581 tgtcgccggt gtcacccgtc accgtcaccc cgccctgcac cagcgccagg tcaacgcccg
     2641 cgtgcggatc ggcgaggcgc tcgaggttct gcagcgaccc ggctgacggc agcaccttca
     2701 gggtgatgcc gttgcgcgcc aggatcggcc ggtatttctc ggccatgttg tagaaaatgc
     2761 tgccgaccgg cccgctgctg atcgtcacgg tgcgcggcgg cggttgcatg aagcgcagca
     2821 ctagccacgc cgccagcgcc acgatcaaca gggtc
//
LOCUS       DASSVL010000020         6604 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_720654, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000020 DASSVL010000000
VERSION     DASSVL010000020.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 6604)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6604)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6604
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_720654"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2816)
                     /locus_tag="VFM52_00325"
     CDS             complement(<1..2816)
                     /locus_tag="VFM52_00325"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component regulator propeller
                     domain-containing protein"
                     /protein_id="HET8763643.1"
                     /translation="MSRHGGACAWLLAALLLVAGHWARAASPVDPWRALEQQWFDTVG
                     MADGLPHSITTALAQDRNGVLWIGTMGGLVRYDGYRTQVFDTADVSRGGLPDSYIRCL
                     LELPDGSLLVGTNAGGLARFDPRDNRFRHYPTGPGGSGSRKIYGFAADGDRGVWIATE
                     DGLAHLDLKRDRLQSVATGAQTAARDFAVLQDRAGNLWLGNNNGLFVRPAGRNTFERP
                     AQPGGLVGDVLHDQIWALHEDAEGRLWAGSVQRGAVYRETDGTWRAVPGFSNRVGDVR
                     QATVRDFREVTPNHMWIATDGSGIVSHVPGATGVETIDYDISLPSSLPGDAVRALLLD
                     RAGNIWAATDAGAAHTKASPDIAFSVLPSIDTAHALSNPNVRSVFVDSRHRIWLGLAA
                     GHIDLIDLSAGMIQHLHLGHRQRHRDVQSLAEAPDGSIWAGTQGLARIDPDTLAVQDA
                     LLPALGDAPVLSLLRYGPYMLMGTYGGAYRYDTRDGTLIHYRHRDDQPGSLAHDSVHQ
                     IARIGDAIWYATGDGISIARNPLQTSGFTNLSQRNGGLSGLPQNLVLSSAEDRRGRVW
                     VGTLGGLGLLANGNAPPYDVRTFGTADGLVSDKVNAVLPDGDGNIWMSTTNGIAVIDG
                     NGLRIRNLGRRDGQQITSYIYAAAARMADGTLLFGGMGGLTVIRPQRQPAHLAPPALR
                     ITNTLVNGHPLPFGRLPGDGDTLALGAHERNLRLDFALLDYQAPRETAYSYRLDGLDK
                     DWIEVPTGSSPSAVYTNLPHGRYRLRLRAMPRGMHAQVAESTLAISVAPFWYETLWAG
                     LAAALLLAALILAAVHLRTVYLRRRAQELQKQIKEHTRDLRAANRRLDLLAGTDELTG
                     IHNRRRFLELAEVIRRDETMPVASMVLLDLDHFKRVNDTHGHLAGDAVLRATAEVIGR
                     YLRREDLVGRYGGEELVMCLPGLAA"
     gene            2958..4295
                     /locus_tag="VFM52_00330"
     CDS             2958..4295
                     /locus_tag="VFM52_00330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017461083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="replication-associated recombination protein A"
                     /protein_id="HET8763644.1"
                     /translation="MPRAPSSTDSLFAEPEALKPLAERMRPRTLDEVVGQRRLVAPGC
                     ALRRALEAGRLHSMVLWGPPGCGKTTLALLVAHYADADFKAISAVLSGLPEVRKALAE
                     AEANFAQGRRTVLFVDEVHRFNKAQQDAFLPHIERGVILFVGATTENPSFELNSALLS
                     RCRVHVLEPVSAADIVAALQRALTDAERGLGALQLVVGDAALQLIAEAADGDVRRALT
                     LLEIAAELAHDRRIDDATLQQVLADRTRRFDKQGEQFYDQISALHKSVRSSDPDAAVY
                     WLARMLDGGCDPRYLARRMTRMAVEDVGLAEPRAWRMALDAWDTYERLGSPEGELGLA
                     QLAIWLAVAPKSNAAYKAWNAARAAVRDTGTLEVPMHLRNAPTKLMKGLGYGKGYQYD
                     HDAPGGIALDQQCLPDALDGTLFYEPVERGLEIQLRAKLLPLRDARRAARDKR"
     gene            4614..5267
                     /locus_tag="VFM52_00335"
     CDS             4614..5267
                     /locus_tag="VFM52_00335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008216427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HET8763645.1"
                     /translation="MIQIAVVDDHELVRTGFRMILEREPDLKVCGEANNAEDGLRLIR
                     KLKPEVAVVDVHMPGMSGIELTERVCRAELPTHIVVVTVVDDGRFPKRLLEVGATGYL
                     TKGCSADELVTAVRHAAIGRRYLAPAVAQQLALAAIDGTGSPFDALSGRELEVAMMLV
                     RGKPLTLIGEQLNLSPKTVSTYKQRLMEKLRVEHVLGLAHLMTLHGLVDSPNHQVRI"
     gene            complement(5343..>6604)
                     /locus_tag="VFM52_00340"
     CDS             complement(5343..>6604)
                     /locus_tag="VFM52_00340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8763646.1"
                     /translation="FRSSAAAAPVATPATSPESPASRGDTRGNRNAPRRNERPERERG
                     ERGNRGGSTSGNGNNRQRRDGNPSQQAKSSSGQQGGRGNRGQHGGDAASRQTPRGSRP
                     ERQERQSAPAVGSEPKPVANERKPVATAAVVAPAVAATEAVSTPPAPATPTTPVETKL
                     PGSAPDAATQDAQTVAMPADGSAATDADAENPTRRRRGRRGGRRRRRHDEAVSGAEQE
                     ASSTSDADVTDADATEDRAPESAAVKSDAPVATAPDAVPAPSPAVAASAVIPADATTP
                     APPKAVETAAKATRPEPKRMLTEAPLAAAVATAFSLPSLPPIPDKPRTIEPVAPTVAS
                     STAATAAVVPAAPAASDTHAALAPSVFPAATADIPAPAAAKPHVAVADEAPRQGELPV
                     VPRATVVVAPAPEPAPATPEPHRDAGA"
BASE COUNT          902 a         2230 c         2445 g         1027 t
ORIGIN      
        1 gccgcaaggc ccggcaggca catcaccagc tcctcgccgc cgtagcggcc gaccaggtcc
       61 tcgcggcgca gataccggcc gatcacctcg gcggtggcgc gcagcacggc gtcgccggcc
      121 aggtggccgt gggtgtcgtt cacgcgcttg aagtggtcga ggtcgagcag aaccatgctc
      181 gccaccggca tcgtctcgtc ccggcggatc acttcggcca gttcgaggaa gcggcgacgg
      241 ttgtggatgc cggtcagctc gtcggtgccg gcgaggagat ccagccgccg gttggcggca
      301 cgcaggtcgc gcgtgtgctc cttgatctgt ttttgcagct cctgggcgcg tcgacgcagg
      361 tagacggtgc gtaggtgcac cgccgccagg atcagcgcgg caagcagcag cgcggccgcc
      421 aggccggccc acagggtttc gtaccagaat ggagcaacgc tgatcgccag ggtgctttcc
      481 gcgacctggg cgtgcatgcc gcgcggcatg gcgcgcaggc gcagccggta gcggccatgg
      541 ggcaggttgg tatacaccgc gctgggactg ctgcccgtgg gcacctcgat ccaatccttg
      601 tcgaggccgt ccaggcggta gctgtacgcg gtttcccgcg gcgcctggta gtcgagcagc
      661 gcgaaatcga gtcgcaggtt gcgctcgtgc gcgcccagcg ccagcgtgtc gccatcgccg
      721 ggcagccggc cgaacggcag cgggtggccg ttcaccagcg tgttggtgat gcgcagtgcc
      781 ggtggcgcga ggtgcgccgg ctgccgttgc ggacggatca cggtgagtcc gcccatgccg
      841 ccgaacaaca gggtgccgtc tgccatgcgc gccgcggcgg cgtagatgta gctggtgatt
      901 tgctggccgt cgcgccggcc caggttgcgg atgcgcaggc cgttgccgtc gatcaccgcg
      961 atgccgttgg tggtgctcat ccatatgttg ccatccccgt ccggcagcac cgcgttgacc
     1021 ttgtcgctga ccagcccgtc ggcggtgccg aacgtgcgca cgtcgtacgg tggagcgttg
     1081 ccgttcgcca gcaggccaag gccgcccagc gtgcctaccc agacgcggcc gcgacggtcc
     1141 tcggcgctcg acagcaccag gttctgcggc aggccggaca ggccgccgtt gcgctggctg
     1201 agattggtga agccgctggt ctgcagcggg ttgcgcgcga tgctgatgcc gtcgccggtg
     1261 gcgtaccaga tggcgtcgcc gatacgggcg atctggtgca cgctgtcgtg ggcaaggctg
     1321 ccgggctggt cgtcgcggtg gcggtagtgg atcagcgtgc cgtcgcgggt atcgtagcgg
     1381 taggcaccgc cgtaggtgcc catcagcatg taggggccgt accgcagcag gctcagcacc
     1441 ggggcgtcgc cgagcgcggg cagcagggcg tcctggaccg ccagcgtgtc gggatcgatg
     1501 cgcgccaggc cctgggtgcc ggcccagatc gagccgtccg gcgcctcggc caggctctgc
     1561 acgtcgcggt gccgttgccg gtggcccagg tgcaggtgct ggatcatgcc ggcggacagg
     1621 tcgatcaggt cgatgtgccc cgcggccagg cccagccaga tgcggtggcg gctgtccacg
     1681 aacacgctgc gcacgttcgg gttggagagc gcgtgcgcgg tgtcgatcga gggcagcacc
     1741 gagaaggcga tgtccgggct ggccttggtg tgcgcggcgc cggcgtcggt cgccgcccag
     1801 atgttgccgg cgcggtccag cagcagcgcg cgcacggcgt cgcccggcag cgaggaaggc
     1861 agggatatgt cgtagtcgat ggtctcgacg ccggtggcgc caggcacgtg gctcacgatg
     1921 ccgctgccgt cggtggcgat ccacatgtga ttgggcgtca cctcgcggaa atcacgcacc
     1981 gtggcctggc gcacgtcgcc aacgcggttg ctgaagcccg gtaccgcgcg ccacgtgcca
     2041 tccgtttccc ggtacacggc gccgcgctgc acactgcccg cccacagcct gccttcggcg
     2101 tcctcgtgca gtgcccagat ctggtcgtgc agcacgtcgc cgaccagccc gcccggctgc
     2161 gcgggccgct cgaacgtgtt tcggcctgcg gggcgcacga acaagccgtt gttgttgccg
     2221 agccacaggt tgccggcgcg gtcctggagg acggcgaagt cgcgcgcggc ggtttgcgca
     2281 ccggtagcca cggactgcag gcgatcgcgc ttcaggtcga ggtgggccag gccatcctcg
     2341 gtggcgatcc agacgccgcg gtcgccgtcc gccgcaaatc cgtagatctt gcggctgccg
     2401 ctgccgcccg gccccgtggg gtagtggcgg aaccggttgt cgcgcgggtc gaagcgggcc
     2461 aggccgccgg cgttggtgcc caccagcagg ctgccgtcgg gcaattccag caggcagcgg
     2521 atatagctgt ccggcaggcc gccgcgggaa acatcggcgg tgtcgaagac ctgggtgcga
     2581 tagccgtcgt agcgcaccag cccgcccatg gtgccgatcc acagcacgcc gttgcgatcc
     2641 tgcgccagcg cggtggtgat cgaatgcggc aggccgtcgg ccatgccgac ggtatcgaac
     2701 cactgctgtt ccagcgcccg ccagggatcc acggggctgg cggcacgcgc ccagtggccg
     2761 gccaccagca acagcgcggc gagcagccac gcgcaggcgc caccatgccg gctcacaccg
     2821 gctcccctgt cacgccggcg cggcgtggtt cgtgtgatcc gcggaggctc cccatgcgca
     2881 aactccggtt gcgcccgcat gataccgggg ccggggcggt atcgggccaa gagagcgggt
     2941 gccgtatcat cgcggacatg ccgcgcgcgc cgtcgtccac cgattcactg tttgccgagc
     3001 ccgaggcgct gaagccgctc gccgagcgca tgcgtccgcg caccctcgac gaagtggtcg
     3061 gccagcgccg gctggtggcg ccggggtgcg cgttgcgccg cgcactcgag gccgggcgct
     3121 tgcattcgat ggtgctgtgg ggaccgccgg ggtgcggcaa gaccacgctg gcgctgctcg
     3181 tcgcccacta cgccgacgcc gatttcaagg cgatctcggc ggtgctgtcc ggcctgcccg
     3241 aagtgcgcaa ggcgctggcc gaagccgagg ccaacttcgc ccaggggcgg cgcaccgtgc
     3301 tgttcgtcga cgaggtgcac cgcttcaaca aggcgcagca ggatgcgttc ctgccgcaca
     3361 tcgagcgcgg cgtgatcctg ttcgtcggtg cgaccaccga gaatccgtcg ttcgaattga
     3421 attcggcgct gctttcgcgt tgccgcgtgc atgtgctgga gccggtttcc gcggccgaca
     3481 tcgtcgccgc gctccagcgc gcgctgaccg acgctgagcg tggtctcggt gccctgcagc
     3541 tcgtggtggg cgacgcggcg ttgcagctga tcgccgaggc cgccgacggc gacgtgcgcc
     3601 gcgcgttgac gctgctggag atcgccgccg agctggccca cgaccggcgc atcgacgacg
     3661 ccacgctgca gcaggtgctg gccgatcgca cccgccgctt cgacaagcag ggcgagcagt
     3721 tctacgacca gatctcggcg ttgcacaaat ccgtgcgctc ctccgacccc gacgcggcgg
     3781 tgtactggct ggcgcgcatg ctcgacggcg gctgcgatcc gcgctacctc gcacggcgca
     3841 tgacgcgcat ggcggtcgag gatgtcggcc tggccgaacc gcgggcgtgg cgcatggcgc
     3901 tggacgcctg ggatacctac gagcgcctcg gcagcccgga aggcgagctg ggcttggcgc
     3961 aactcgcgat ctggctcgcc gtcgccccca agagcaacgc cgcctacaag gcctggaatg
     4021 ccgcccgcgc cgcggtgcgc gacaccggca cgctggaggt gccgatgcat ttgcgcaacg
     4081 cgccgaccaa gctgatgaag gggctcggct acggcaaggg ctatcagtac gaccacgacg
     4141 cccccggcgg tattgcgctc gaccagcagt gcctgcccga tgccctcgac ggcacgctgt
     4201 tctacgagcc ggtcgagcgt gggctggaga tccagttgcg cgcgaagctg ctgccgttgc
     4261 gcgacgcgcg gcgcgcggcc cgcgacaagc gctgataccc gcccggtgcg gtgtcgcctg
     4321 tggccaggtg tggcccgcca ggtcgtgcct ggaccacgca cccggtgcag ctccggcggc
     4381 gccggggaac aaacggacag ccgtatcggc gaatgcctac agccccatcc tccggggcgt
     4441 ggcaaggtgc aaacgcggtt ccggccggca agaacttgcg tcaggccgaa atccatgttc
     4501 caaccccggt ttccggccag gcgtgcgtcc actggcgccc gccggtgtcg cggcaacgca
     4561 aggctcgacc gggtggattc cagtttggtg gatcacgaaa aggagcgcca ggcatgatcc
     4621 agattgcagt cgtcgatgac cacgaactcg tgcgcaccgg cttccggatg attctcgaac
     4681 gggagccgga cctgaaggtc tgtggtgagg caaacaacgc ggaagatggg ttgcgcctga
     4741 tccgcaagtt gaaaccggaa gtggccgtgg tcgacgtgca catgcccggc atgagcggca
     4801 tcgagctgac cgaacgggtg tgccgtgccg agttgccgac ccacatcgtg gtggtgaccg
     4861 tggtcgatga cggccgcttc ccgaagcggc tgctggaagt cggggcgacg ggttacctga
     4921 ccaagggctg cagcgccgat gaactggtga ccgcggtacg ccatgccgcg atcggccggc
     4981 gctacctggc gccggcggta gcccagcagt tggcactcgc cgcgatcgac ggcaccggct
     5041 cgccattcga tgcgctgtcc ggccgcgagc tcgaggtggc catgatgctg gtacgcggca
     5101 agcccctgac gttgatcggc gagcagctca acctgagtcc gaaaacggtg tcgacctaca
     5161 agcagcggtt gatggaaaag ctgcgcgtcg agcacgtgct cggcctggcg cacctgatga
     5221 ccttgcacgg cctggtcgac tcgccgaacc accaggtgcg catctgaccg cgccggttgt
     5281 ggatgccgca gacgaaggag ccgggcattg cccggctcct tcgtctgcgt aggtatcgag
     5341 tatcaggcgc ctgcatcccg atggggttcc ggggtcgccg gcgcaggttc cggggccggc
     5401 gccaccacca cggtggcacg tggcacgacc ggcaactcac cctggcgtgg ggcctcgtcc
     5461 gccacggcaa cgtgcggctt ggcggccgcc ggcgccggga tgtcggcagt ggctgcggga
     5521 aataccgacg gcgcgagcgc agcgtgggta tcggaagcgg ccggcgcggc ggggaccacc
     5581 gctgccgtcg ccgccgtgga cgacgccacc gtcggcgcga ccggctcgat cgtgcgcggc
     5641 ttgtccggga ttggcggcaa cgacggcagg ctgaaagcgg tggcgaccgc agctgccagg
     5701 ggcgcttccg tcaacatccg cttgggttcc gggcgggttg ctttcgcggc ggtctcgacg
     5761 gccttgggcg gtgccggcgt cgtggcatca gccgggatca ccgctgacgc ggcaactgcc
     5821 ggggatggcg cgggcacggc atcgggagcc gtggcgaccg gtgcgtcgga tttgacggcg
     5881 gcagactcag gcgcgcgatc ttcagtggcg tcggcgtcag tgacgtcggc gtcagacgtg
     5941 gacgatgcct cctgctcggc gccggacacg gcctcgtcgt gccggcgacg gcgacggcca
     6001 ccgcggcgac cgcggcggcg acgtgtcggg ttctcggcat cggcgtccgt ggcggcagac
     6061 ccgtcggcag gcatcgccac tgtctgcgcg tcctgcgtgg cggcgtcagg cgcgctgccc
     6121 ggcaacttcg tttcgaccgg cgtggtcggg gtggcgggtg ccggaggcgt cgacacggcc
     6181 tcggtggcgg cgaccgcggg tgcaaccact gccgccgtcg ccacgggctt gcgctcgttg
     6241 gcgaccggct tcggctcgct gccgacggcc ggtgccgact ggcgctcctg gcgctccggc
     6301 ctggagccac gcggtgtctg gcgggatgcg gcgtcgccac cgtgctggcc gcgattgccg
     6361 cgaccgcctt gctggccgct ggaagacttg gcctgctgcg acggattgcc gtcgcggcgc
     6421 tggcgattgt tgccgttgcc agacgtgctg ccgccgcgat tgccgcgttc gccccgttcc
     6481 cgctccggac gctcgttgcg ccgcggcgcg ttgcggttgc cgcgggtgtc gccgcggctg
     6541 gcggggcttt ccgggctggt ggcaggcgtc gcgacgggag ccgctgccgc actgctgcgg
     6601 aacc
//
LOCUS       DASSVL010000021         2754 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_706610, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000021 DASSVL010000000
VERSION     DASSVL010000021.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2754)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2754)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2754
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_706610"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..538)
                     /gene="upp"
                     /locus_tag="VFM52_00345"
     CDS             complement(<1..538)
                     /gene="upp"
                     /locus_tag="VFM52_00345"
                     /EC_number="2.4.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008437805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004845 - uracil phosphoribosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uracil phosphoribosyltransferase"
                     /protein_id="HET8763647.1"
                     /translation="MAIVQVTHPLVQHKLGLMRRADNSTKTFRELAGEVAALLTYEAT
                     ADLETEDAVVEGWAGPVPVRRIKGRKVTLVPILRAGLGMLPGVLELIPAAKVSVVGMR
                     RDEATLLPETYYENLVGDIADRTVMILDPMLATGGTLVATIDMLKAAGATRIRGLFLV
                     AAPEGLRVLQAAHPDVDAY"
     gene            complement(582..2093)
                     /locus_tag="VFM52_00350"
     CDS             complement(582..2093)
                     /locus_tag="VFM52_00350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003466030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HET8763648.1"
                     /translation="MAPDTQLIGQLAPLRARKGERRTTGLDDATVLRFAASHPDLGAA
                     VAAAAAEFARVEADASVRDLLDLDEEAQIAAVQADFVNFYPQDAVNPYVALAARGPWV
                     VTLKGAVLYDTGGYGMLGFGHAPQAVLDAMAKPQALANIMTPSLSQLRFTRALRNEIG
                     HSRKDGCPYAKFMCLNSGSESVSLAARIADTNTKLMTDPGAKHAGRKVKRLVVKGSFH
                     GRTDRPALYSDSSRKTYLKFLASYRGEESVIAIEPYDLAALRKAYADADANGWFIEAM
                     FLEPVMGEGDPGRSVPVEFYAAARELTKAHGSLFLVDSIQAGLRAAGCLSIVDYPGFE
                     GQEAPDMETYSKALNAGQFPLSVLATNERAAAIYARGTYGNTMTANPRGLDVACAVLA
                     QLTPALRANIRDRGREAIAGLEALKSELGGLITKVQGTGLLFSCELAPQFKGYGAGST
                     EEWLRERGLGVIHGGENSLRFTPHFGIGADELQLVLQLVKQALLEGPRQQQAA"
     gene            2236..2670
                     /locus_tag="VFM52_00355"
     CDS             2236..2670
                     /locus_tag="VFM52_00355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003489775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC family transcriptional regulator"
                     /protein_id="HET8763649.1"
                     /translation="MASLTPADEALLSVLRENARAPTTEIARRLQLSRTTVQSRIERL
                     ERMGVIAGYTVRIGDDFAGDRIRALIMVTVFPKQMPAVVEALRAMPEVRSLQSVNGGW
                     DLVAVAVVPGVGEMDVLTDRIGALPGVERTNSSLVLSTKFER"
BASE COUNT          383 a          928 c         1013 g          430 t
ORIGIN      
        1 cgtacgcgtc cacgtccgga tgcgcggcct gcaggacgcg caggccttcc ggcgccgcca
       61 ccaggaacag gccgcggatc cgcgtcgcgc ccgcggcctt gagcatgtcg atcgtcgcca
      121 ccagcgtgcc gccggttgcg agcatggggt cgaggatcat caccgtgcgg tcggcgatgt
      181 cgccgaccag gttctcgtag taggtctccg gcagcagcgt cgcttcgtcg cggcgcatgc
      241 cgacgacgct gaccttcgcg gccgggatca gctcgagcac gccgggcagc atgccgaggc
      301 ccgcgcgcag gatcggcacg agcgtgacct tgcgcccctt gatgcggcgc accggcaccg
      361 ggcctgccca gccttcgacc accgcgtcct cggtctcgag gtcggccgtg gcttcgtagg
      421 tgagcagcgc ggcgacttcg ccggcgagct cgcggaaggt cttggtgctg ttgtcggcgc
      481 gccgcatcag gcccagcttg tgctggacca gcgggtgcgt gacctggacg atggccatcg
      541 cggcattccc ctcgggagca ggccgcgatg gtatcccggc ttcaggccgc ctgctgctgg
      601 cgcgggccct cgagcaaggc ctgcttcacc agctgcagca cgagctgcaa ttcgtccgcg
      661 ccgatgccga agtgcggggt gaagcgcagc gagttctcgc cgccgtggat cacgccgagg
      721 ccgcgctcgc gcagccattc ctcggtggag cctgcgccgt aacccttgaa ctgcggcgcg
      781 agttcgcacg agaacagcag gccagtgccc tgcaccttgg tgatcaggcc gccgagctcg
      841 gacttcagcg cttccaggcc ggcgatggcc tcgcggccgc gatcgcggat gttcgcgcgc
      901 agcgcaggcg tgagctgcgc gagcaccgcg caggccacgt cgaggccgcg cgggttcgcg
      961 gtcatggtgt tgccgtaggt gccgcgcgcg tagatcgcgg cggcgcgctc gttggtggcc
     1021 agcaccgaca gcgggaactg gcccgcgttg agcgccttcg aataggtttc catgtccggc
     1081 gcttcctggc cttcgaagcc ggggtagtcg acgatggaca ggcagccggc ggcgcgcagg
     1141 ccggcctgga tcgagtcgac caggaacagc gagccgtgcg ccttcgtcag ctcgcgcgcg
     1201 gcggcgtaga actccaccgg cacgctgcgg cccgggtcgc cttcgcccat caccggctcg
     1261 aggaacatcg cctcgatgaa ccagccgttc gcgtcggcgt cggcgtaggc cttgcgcagc
     1321 gcggccaggt cgtagggctc gatcgcgatc accgactcct cgccgcggta ggaggcgagg
     1381 aacttgaggt aggtcttgcg gctggaatcc gaatacagcg ccgggcggtc ggtgcggcca
     1441 tggaagctgc ccttgaccac gaggcgcttg accttgcggc cggcgtgctt cgcgccgggg
     1501 tcggtcatca gcttggtgtt ggtgtcggcg atgcgcgcgg ccagcgacac cgactcggag
     1561 ccggagttga ggcacatgaa cttcgcgtac gggcagccgt ccttgcggct gtggccgatc
     1621 tcgttgcgca gcgcgcgggt gaagcgcagc tgcgacaggc tcggggtcat gatgttggcc
     1681 agcgcctgcg gcttcgccat cgcgtcgagc acggcctgcg gcgcatggcc gaagccgagc
     1741 atgccgtagc cgccggtgtc gtacagcacc gcgcccttca gggtcacgac ccaggggccg
     1801 cgcgcggcga gcgcgacgta cgggttcacg gcgtcctgcg ggtagaagtt gacgaaatcg
     1861 gcctgcacgg cggcgatctg cgcctcttcg tccaggtcca ggagatcgcg gacggacgca
     1921 tcggcctcga cccgggcgaa ttcggccgcg gcggcggcga cggcggcgcc caggtccggg
     1981 tggctggccg cgaagcgcag cacggtggcg tcgtcgaggc cggtcgtgcg gcgttcgccc
     2041 ttgcgggcgc ggagcggggc gagctgaccg atgagctggg tgtcgggggc catggcgagg
     2101 tcctctggtg caggtggggc cggcgcggtg ccgcgcggca agcctctatt atcgggtagt
     2161 tttcggcgga cggcaggtgc gatctgcgca gattccctgt agatttcggc gatctgccga
     2221 accggatcca gcaacatggc gagcctgacg cccgcggacg aggccctgct gtccgtcctg
     2281 cgcgaaaatg cgcgcgcccc gaccaccgag atcgcgcgcc gcctgcaact gtcccgcacc
     2341 accgtgcaga gccggatcga gcggctggag cggatgggcg tgatcgccgg ctacaccgtg
     2401 cggatcggcg acgacttcgc gggcgaccgg atccgcgccc tgatcatggt caccgtcttc
     2461 ccgaagcaga tgcccgccgt cgtcgaagcc ctgcgcgcga tgccggaagt gcgcagcctg
     2521 cagtcggtca acggcggctg ggacctggtc gcggtggcgg tggtgccggg cgtcggcgag
     2581 atggacgtgc tcaccgaccg catcggcgcg ctgccgggcg tggagcgcac gaactcgtcg
     2641 ctggtgctgt ccacgaaatt cgagcgctga tcccttgaag aaatccgatt tccattacga
     2701 gctgccgccc gaactgatcg cgcaggcgcc gctgccggaa cgctcggcca gccg
//
LOCUS       DASSVL010000022         2056 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_650130, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000022 DASSVL010000000
VERSION     DASSVL010000022.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2056)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2056)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2056
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_650130"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..346)
                     /locus_tag="VFM52_00360"
     CDS             complement(<1..346)
                     /locus_tag="VFM52_00360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007804154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNB domain-containing ribonuclease"
                     /protein_id="HET8763650.1"
                     /translation="MPATRLRLARGAETTLTGGLAQIASELHLPPAFAPGVEAAAAQA
                     ARAPRLPALDRTDLALVTIDPPDSLDLDQALHIERLGSGYRVHYAIADVAAFVVAGDA
                     VDAEAQRRGETLY"
     gene            complement(484..1263)
                     /locus_tag="VFM52_00365"
     CDS             complement(484..1263)
                     /locus_tag="VFM52_00365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019466358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SapC family protein"
                     /protein_id="HET8763651.1"
                     /translation="MAEVIFYERPVPLNRTEHKDLRLKPVPNMKFALTAHSVPLTGVE
                     FGLAARDLPIVFAGNTLEDAGPVALLGLRQNENLFVDAAGQWAPNIYIPAFVRRYPFV
                     LAEKPAGQEGDDFAVFLDAGYEGFGTTEGDRLFNEDGTDTELLTRAVGFLGEFQQHVA
                     RTRAFMAQLRQHNLLEPRNMSLRKGAPDDPNGHVINLNGLFVVNEDKLRELDEKTAKE
                     FLHEGVLGWIYAHLMSLNNIDRLGQRLTQREETEAAAAPKN"
     gene            1516..>2056
                     /locus_tag="VFM52_00370"
     CDS             1516..>2056
                     /locus_tag="VFM52_00370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015448681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HET8763652.1"
                     /translation="MLMEVTNRVDLTTTRVLSLDAAGRILDWISWQDAVCLYVRGVIA
                     WTLGEPCLTVHGGWNRTTGMQSTLALHPIVASTGRCHEQAVDPAPTLSNPALFARDRH
                     LCLYCGEHFTRGELTRDHVMPVSRGGRDEWENVVSACLACNLRKGNRTPQQANMPLLA
                     VPYRPSWVEHLILSNRNILA"
BASE COUNT          311 a          731 c          692 g          322 t
ORIGIN      
        1 catacagggt ttcgccgcgc cgctgcgcct cggcgtccac cgcatcgccg gccacgacga
       61 acgcggccac gtcggcgatg gcgtaatgca cgcggtagcc gctgccaagg cgctcgatgt
      121 gcagtgcctg gtcgagatcc agcgagtccg gcgggtcgat ggtgaccagc gcgaggtcgg
      181 tgcgatcgag cgccggcagg cgcggcgcac gggccgcctg cgcggcggcc gcctcgaccc
      241 cgggcgcgaa cgccggcggc aggtgcagct cgctggcgat ctgcgccagg ccaccggtca
      301 gcgtggtctc ggcaccgcgg gcaaggcgaa gacgcgtggc cggcatggga tgtcctgcgc
      361 aggaggcgtg gcggcaaaga ccgcactata cggcgcgccg ggccaccgcc ggtgtgcgcc
      421 atgccaacaa gaaggggcga cgcctgcgcg ccgccccttc ggcttgccac accgcagccg
      481 ggatcagttc ttcggcgccg ccgcggcttc cgtctcctcg cgctgggtga ggcgctggcc
      541 gaggcggtcg atgttgttga gcgacatcag gtgggcgtag atccagccga gcacgccctc
      601 gtgcaggaat tccttcgcgg tcttctcgtc cagctcgcgc agcttgtcct cgttcaccac
      661 gaacaggccg ttcaggttga tgacatggcc gttcgggtcg tccggcgcgc ccttgcgcag
      721 gctcatgttg cgtggttcga gcaggttgtg ctggcgcagc tgcgccatga acgcacgggt
      781 gcgcgcgacg tgctgctgga actcgccgag gaagcccacc gcgcgggtca acagctcggt
      841 gtcggtgcca tcctcgttga acaggcgatc gccttcggtc gtgccgaagc cttcgtagcc
      901 ggcgtcgagg aacaccgcga aatcgtcgcc ttcctgcccg gccggcttct cggccagcac
      961 gaacggataa cggcgcacga aggcggggat gtagatgttc ggcgcccact gcccggcggc
     1021 atcgacgaac aggttctcgt tctggcgcag gccgagcagg gcgaccgggc cggcatcctc
     1081 gagggtgttg ccggcgaaca cgatcggcag atcgcgcgcc gccaggccga actccacgcc
     1141 ggtcagcggc accgagtgcg cggtcagcgc gaatttcatg ttcggcaccg gcttcaggcg
     1201 caggtccttg tgctcggtgc ggttgagcgg caccgggcgc tcgtagaaga tcacttcagc
     1261 cacgttgtta cctctgcccc gccgtgccgg ggttgccacc gttggccccc cctcccaaac
     1321 ccggcgtcgg gtccacgaat gaacgcgcac tatatcagcg cgccccagcc cgccgtaagc
     1381 cccgccggtg ccggctatct cgttgagcgc aaagcgattc gcgtggcgca ggcggcgatc
     1441 tggtctatgc tgcaatgcgt tgaacgccgt tgcatggctg cagcgctctt tcgccttggc
     1501 agagggacga accgcatgct gatggaagtt accaaccggg tggacctcac caccactcgc
     1561 gtgttgtcgc tcgacgccgc cggccgcatc ctcgactgga tcagctggca ggacgcggtt
     1621 tgcctctacg tgcgcggcgt catcgcctgg acactgggcg agccctgcct caccgtgcac
     1681 ggcggctgga accgcacgac cggcatgcag agcacgctgg ccctgcaccc catcgtcgcc
     1741 agcaccggcc gctgccatga acaggcggtg gacccggccc ccacgctcag caacccggcg
     1801 ctgttcgcgc gcgaccgcca cctgtgcctg tactgcggcg agcacttcac ccgcggcgag
     1861 ctgacccgcg accacgtcat gccggtgtcc cgcggcggcc gcgacgagtg ggaaaacgtc
     1921 gtcagcgcct gtctcgcctg caacctcagg aaaggcaacc gcaccccgca gcaggccaac
     1981 atgccgctgc tcgccgtgcc ctaccggcca agctgggtcg agcacctgat cctgtccaac
     2041 cgcaacatcc tcgccg
//
LOCUS       DASSVL010000023         3518 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1031555,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000023 DASSVL010000000
VERSION     DASSVL010000023.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3518)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3518)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3518
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1031555"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..354)
                     /locus_tag="VFM52_00375"
     CDS             complement(<1..354)
                     /locus_tag="VFM52_00375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007807515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitric-oxide reductase large subunit"
                     /protein_id="HET8763653.1"
                     /translation="MNDAALPPTDDHAKLSPWWIRTILIVLVFGMVVLIAITVEGYRK
                     APPVPAQVVDAHGQTLFTGDDIRAGQAVFLKYGLMDNGSIWGHGAYLGPDYAAEALHE
                     IGVDTAEALAQAQFGT"
     gene            complement(525..848)
                     /gene="fdxA"
                     /locus_tag="VFM52_00380"
     CDS             complement(525..848)
                     /gene="fdxA"
                     /locus_tag="VFM52_00380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005994928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin FdxA"
                     /protein_id="HET8763654.1"
                     /translation="MTHVVTENCINCRRTDCVEVCPVDAFHAGPNFLAIDPDECIDCT
                     LCVDVCPVDAIYADIDMPAGQEGFLALNAELAKQWPVMTEKVPCMPDAAKWDGVPGKL
                     PLLRR"
     gene            1022..2488
                     /gene="ccoN"
                     /locus_tag="VFM52_00385"
     CDS             1022..2488
                     /gene="ccoN"
                     /locus_tag="VFM52_00385"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008438182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c oxidase, cbb3-type subunit I"
                     /protein_id="HET8763655.1"
                     /translation="MPTTEYYNDRVVRQFLLAAAVWGIIGMSVGVYIAAELMWPALNF
                     DIPFITFSRLRPDHTFGVIFAFGGSALIGTCYYVVQRTGHVRLAYDKLASFTFWGWQL
                     VCVLAMTTVPAGITQSKEYAEPEWWIDIIMAIVWISYGVVFFGTLARRRIKHIYVACW
                     YYGAFIVAVGLMHIVNNLAIPVSWTKSYPIYSGVVDAMVQWWYGHNAVAFFLTTGFLA
                     MMYYFVPRQAQQPLWSYRFSIVNFWALISVYMWAGAHHLMYTALPDWVQSVGMAFSIV
                     LLMPSWGSAANGLMTFNGVWDKLKTDPAVKFMVMSLVFYAASTTEGTMMAIKTVNSLS
                     HYTDWTIAHVHNGSLGWVAMITIGSLYAMAPKVLGRPAMHSHKAMELHFWLHMLGTLF
                     YIGAMWTAGITEGEMWRATLPDGALKYGFLDSLIAIKPMYIVRWFGGVMILSGMWVMA
                     WNLWHTASDARMRLIKPIPVPVAEPVPHQIPAPLPAAG"
     gene            2499..3152
                     /gene="ccoO"
                     /locus_tag="VFM52_00390"
     CDS             2499..3152
                     /gene="ccoO"
                     /locus_tag="VFM52_00390"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008207499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c oxidase, cbb3-type subunit II"
                     /protein_id="HET8763656.1"
                     /translation="MAYKHFEAIEKHAPLLGVCIAIMVSLGGLAEILPLFIQAHEVKP
                     PADVKPYDALRLAGRDVYVANGCYLCHSQMIRALRFETQRYGHFSTAEESVYDRPFQW
                     GSKRTGPDLARVGGKYSDQWQHMHLMNPRSVVPESNMPDYPWLAKNTIDGADIQARMR
                     ALRKLGDPYTDAEIAAAPEAVKGKTEMDALIAYLQGLGIDNEPHQLADKPAVDGGEP"
     gene            3149..3334
                     /locus_tag="VFM52_00395"
     CDS             3149..3334
                     /locus_tag="VFM52_00395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008207497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cbb3-type cytochrome c oxidase subunit 3"
                     /protein_id="HET8763657.1"
                     /translation="MSPIWGEISGVVTVFLMVLFIGIWIWAWRKHHKPVFDRMAHLPM
                     EDQDLPADTATQQETTR"
     gene            3331..>3518
                     /locus_tag="VFM52_00400"
     CDS             3331..>3518
                     /locus_tag="VFM52_00400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007508064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cbb3-type cytochrome c oxidase N-terminal
                     domain-containing protein"
                     /protein_id="HET8763658.1"
                     /translation="MSTGLSIWVMCLVVFNMGVTFFLYLWGPRAKIPQSPDGTTGHLW
                     AGGAIREGLHRLPRWWLIS"
BASE COUNT          574 a         1172 c         1159 g          613 t
ORIGIN      
        1 ggtgccgaat tgcgcctgcg ccagcgcctc ggcggtgtcc acgccgatct cgtgcagcgc
       61 ctcggcggcg tagtccggcc cgagataggc gccgtggccc cagatcgagc cgttgtccat
      121 caggccgtat ttcaggaaca ccgcctgccc ggcgcgaatg tcgtcgccgg tgaacagcgt
      181 ctgcccgtgc gcatcgacca cctgcgccgg cactggcggg gccttgcggt aaccctccac
      241 ggtgatcgcg atcagtacca ccatgccgaa caccagcacg atcaggatgg tgcggatcca
      301 ccacggcgag agcttcgcgt ggtcgtcggt gggcgggagt gcggcgtcgt tcatcggtgc
      361 tctcctttac gggcgggccg gacacgccgg ctccacggac aaaaggcctt gccgctcggc
      421 gcggcaagca cggaccatgc gatcaactgc tgacggttct ggcggcgccc ctcgcggccg
      481 cccacagccg accttaccgg tttcgcctca ccagcgaaac ccgttcaacg ccggagcagc
      541 ggcaacttgc ccggcacgcc gtcccacttg gcggcatccg gcatgcaggg caccttctcg
      601 gtcatcaccg gccactgttt cgccagctcg gcgttgagcg cgagaaatcc ctcctggccg
      661 gccggcatgt cgatgtcggc gtagatcgcg tcgaccgggc agacgtcgac gcacaaggtg
      721 cagtcgatgc actcgtcggg gtcgatcgcg aggaaattcg gaccggcgtg gaaggcgtcg
      781 accgggcaca cctcgacgca gtcggtgcgc cggcagttga tgcagttctc ggtgacgaca
      841 tgagtcatgc aggggcccct ggccggatca cgctgcgggc atgccgcgac ggccgcaccc
      901 ggccatgaca ggtgtcggtg ccgcgcatcg cgtcgggcaa attgtcgcag accactgacg
      961 tgcatcacct ttggcggttg cggcaatgcg acaatatcga gcttaacctc aggggatacc
     1021 catgcccacc accgagtatt acaacgaccg ggtcgtgcgc cagttcctgc tggcggccgc
     1081 cgtctggggc atcatcggca tgtcggtcgg cgtgtacatc gccgccgagt tgatgtggcc
     1141 ggcgctgaac ttcgacatcc cgttcatcac cttcagccgg ttgcgcccgg accatacctt
     1201 cggcgtgatc ttcgcgttcg gcggctccgc gctgatcggc acctgctact acgtcgtgca
     1261 gcgcaccggc cacgtgcgcc tcgcctacga caagcttgca agcttcacct tctggggctg
     1321 gcagctggtg tgcgtgctgg cgatgaccac ggtgccggcc ggcatcaccc agagcaagga
     1381 gtacgccgag ccggagtggt ggatcgacat catcatggcg atcgtgtgga tcagctatgg
     1441 cgtggtgttc ttcggcaccc tcgcccggcg gcggatcaag cacatctacg tggcgtgctg
     1501 gtactacggc gcgttcatcg tcgcggtggg cctgatgcac atcgtcaaca acctcgcgat
     1561 cccggtgtcc tggaccaagt cctacccgat ctactcgggc gtggtcgacg cgatggtgca
     1621 gtggtggtac ggccacaacg cggtggcgtt cttcctgacc accggcttcc tggcgatgat
     1681 gtactacttc gtgccgcgcc aggcgcagca gccgctgtgg agctaccgct tctcgatcgt
     1741 gaacttctgg gcgctgatct cggtgtacat gtgggccggc gcgcaccacc tgatgtacac
     1801 cgcgctgccg gactgggtgc agtcggtggg catggcgttc tccatcgtgc tcttgatgcc
     1861 gtcgtggggt tcggcggcga acggcctgat gaccttcaac ggggtgtggg acaagctcaa
     1921 gaccgacccg gcggtgaagt tcatggtgat gtcgctggtg ttctacgcgg cgtccaccac
     1981 cgagggcacg atgatggcga tcaagaccgt caactcgctg tcgcactaca ccgactggac
     2041 gatcgcccac gtgcacaacg gctcgctcgg ctgggtggcg atgatcacca tcggctcgct
     2101 gtacgcgatg gcgccgaagg tgctcggccg cccggcgatg cattcgcaca aggcgatgga
     2161 gctgcacttc tggctgcaca tgctgggcac gctgttctac atcggcgcga tgtggaccgc
     2221 cggcatcacc gaaggcgaga tgtggcgcgc gacgctgccc gacggcgcgc tcaagtacgg
     2281 cttcctggac agcctgatcg cgatcaagcc gatgtacatc gtccgctggt tcggcggggt
     2341 gatgatcctg tccggcatgt gggtgatggc gtggaacctt tggcacaccg cgagcgatgc
     2401 ccgcatgcgc ctgatcaagc cgatcccggt cccggtggcc gagccggtgc cgcaccagat
     2461 cccggccccg ctgccggccg cgggctgagg agacgaccat ggcctacaag catttcgaag
     2521 cgatcgaaaa acatgcgccg ctgctcggcg tgtgcatcgc gatcatggtg tcgctcggcg
     2581 gcctcgccga gatcctgccg ctgttcatcc aggcccacga ggtcaagccg ccggccgacg
     2641 tcaagccgta cgatgcgctg cgcctcgccg gccgcgacgt ctacgtggcc aacggctgct
     2701 acctgtgcca ctcgcagatg atccgcgcgc tgcggttcga gacccagcgc tacggacact
     2761 tctccaccgc ggaggagtcg gtctacgacc gcccgttcca gtggggctcg aagcgcaccg
     2821 ggccggacct cgcccgcgtc ggcggcaagt actcggacca gtggcagcac atgcacctga
     2881 tgaacccgcg cagcgtggtg ccggagtcca acatgccgga ctacccgtgg ctggcgaaga
     2941 acaccatcga cggcgctgac atccaggcgc gcatgcgcgc gctgcgcaag ctcggcgatc
     3001 cgtacaccga cgccgagatc gccgccgcgc cggaagcggt caagggcaag accgagatgg
     3061 acgcgctgat cgcgtacctg caaggcctgg gcatcgacaa cgagccgcac caactggccg
     3121 acaagccggc cgtggacggg ggtgagccat gagtccgatc tggggtgaaa tctccggggt
     3181 cgtcaccgtg ttcctgatgg tgctgttcat cggcatctgg atctgggcgt ggcgcaagca
     3241 ccacaagccg gtgttcgacc gcatggcgca cctgccgatg gaagaccagg acctgccggc
     3301 cgacaccgcc acgcaacagg agacgacccg atgagcaccg gcctttcgat ctgggtgatg
     3361 tgcctggtgg tgttcaacat gggcgtcacc ttcttcctgt acctgtgggg cccgcgcgcg
     3421 aagattccgc aatcgcccga tggcaccacc ggccacctct gggccggcgg cgcgatccgc
     3481 gagggcctgc atcggctgcc gcgctggtgg ctgatttc
//
LOCUS       DASSVL010000024         2644 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1144539,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000024 DASSVL010000000
VERSION     DASSVL010000024.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2644)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2644)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2644
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1144539"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            156..794
                     /locus_tag="VFM52_00405"
     CDS             156..794
                     /locus_tag="VFM52_00405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015446343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0008897 - holo-[acyl-carrier-protein]
                     synthase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4'-phosphopantetheinyl transferase superfamily
                     protein"
                     /protein_id="HET8763659.1"
                     /translation="MHEADGFRTTKVAEPLGADEIHVWRLARPKGAKRAPLQDLLARY
                     LAVDAASVELVAGAHGRPRLAGVLAGALDFNWSHSGELALVALARGIAPGIDVEQLRT
                     RASALDIAERFFTAAEAAWLRTLAGERQQRAFFELWTAREAVLKADGRGIAFGLDHLA
                     FAATPRGMRLDRLDGDDPDAWQVEPVAVGAAAVATLAWRGEPRRVRRFTLAE"
     gene            844..1587
                     /locus_tag="VFM52_00410"
     CDS             844..1587
                     /locus_tag="VFM52_00410"
                     /EC_number="2.6.99.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015446342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033856 - pyridoxine 5'-phosphate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxine 5'-phosphate synthase"
                     /protein_id="HET8763660.1"
                     /translation="MTLLSVNLNKIAVLRNSRGGTEPDICRAAQTCIESGCGGITVHP
                     RPDQRHVRPGDVRALAALLRGRVEYNIEGNPFAPPRGDYPGLIALAREVRPSQVTLVP
                     DSDGQITSDHGFTLARDLDALRPVVAELNAIGCRVSVFGGTEPQDFTLAKGIGVARIE
                     IYTGPYAEAFAEGRPDALLAACAATARQAMQAGLAVNAGHDLSQANLGTFKAAIPGLA
                     EVSIGHALIGEALYQGLATTVRHYLQILR"
     gene            complement(1933..2343)
                     /locus_tag="VFM52_00415"
     CDS             complement(1933..2343)
                     /locus_tag="VFM52_00415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007510047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biopolymer transporter ExbD"
                     /protein_id="HET8763661.1"
                     /translation="MAGVQKSSGPMAEINVTPLVDVLLVLLIIFMITAPIPLEKIKID
                     LPQPNPNVHQPDNPAEPISLKIDQGGALYWNNTPVDENGLKAQFAVVAQQTNQPEIQI
                     KAADAVAYQYVATVLADAKQYNLVKIGFTDSDNQ"
     gene            complement(2347..>2644)
                     /locus_tag="VFM52_00420"
     CDS             complement(2347..>2644)
                     /locus_tag="VFM52_00420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007510046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="biopolymer transporter ExbD"
                     /protein_id="HET8763662.1"
                     /translation="TVPLANPKSDEAKIDTPPLDLAIKDDGSMYYQDHLVSEQELKGQ
                     LAIEAQKSPQPELQIRADKNIEWKVVRKAIGDAKGQGMVHVGFMTQAPLPSAGE"
BASE COUNT          385 a          935 c          901 g          423 t
ORIGIN      
        1 ggtcaccgaa ccaggccacg ccgtacagca gccccacgta gcccagcgcg acgagcagca
       61 gcagccagcc ggcaatcaag cgcgttcccc ccgccaccga caccaaggcg ccgcgcggct
      121 tgtgcctcgc ggccacgatc cgccagcatg tgcgcatgca cgaggcggac ggattcagga
      181 cgaccaaagt agcagagccc ctgggcgctg acgagattca cgtctggcgg ctcgcgcgcc
      241 cgaaaggggc gaaacgggcg ccgctgcagg atctgctggc gcgctatctc gcggtcgacg
      301 ccgccagcgt ggaactcgtc gccggcgcac atggccggcc gcggctggcc ggcgtgctgg
      361 ccggcgcgct cgacttcaac tggtcgcaca gcggcgagct ggcactggtc gcgctcgccc
      421 gcggcatcgc gcccgggatc gacgtcgagc agctgcgtac ccgcgccagc gcactggaca
      481 tcgccgagcg cttcttcacc gccgccgagg cggcgtggct gcgcacgctg gccggcgagc
      541 gccagcagcg tgcgttcttc gagctgtgga cggcgcgcga agcggtgctc aaggccgacg
      601 ggcggggcat cgcctttggc ctcgaccacc tggcgttcgc ggccacgccg cgcggcatgc
      661 ggctggatcg gctggacggc gacgacccgg acgcgtggca ggtggaaccg gttgccgtcg
      721 gcgccgccgc ggtggcgacc ctggcctggc gcggcgagcc gcggcgggtc cgccgcttca
      781 cgcttgccga atagggccaa tcgcggcagt gtgcatggtc cgttcccctg caacgcacgt
      841 cccatgaccc tgctcagcgt caacctcaac aagattgcgg tgctgcgcaa ctcgcgcggc
      901 ggcaccgagc ccgacatctg ccgcgccgcg cagacctgca tcgaatccgg ttgcggcggc
      961 atcaccgtgc atccgcgccc cgaccagcgc cacgtgcgcc ccggtgacgt gcgcgcgctc
     1021 gccgcgctgc tgcgcggccg ggtggaatac aacatcgagg gcaacccgtt cgcgccgccg
     1081 cgtggcgact accctggact gatcgcgctg gcgcgcgagg tgcgcccgag ccaggtcacg
     1141 ctggtgccgg acagcgacgg ccagatcacg tccgaccacg gcttcacgct ggcccgcgac
     1201 ctcgacgccc tgcgtccggt ggtcgccgag ctcaacgcca tcggctgccg cgtcagcgtg
     1261 ttcggcggca ccgagccgca ggacttcacc ctggcgaaag gcattggtgt cgcccgcatc
     1321 gagatctata ccggtcccta cgccgaggcg tttgccgagg gccggcccga cgcgttgctc
     1381 gccgcctgcg ccgccactgc gcggcaagcc atgcaggccg ggcttgcggt caacgccggc
     1441 cacgatttga gccaggccaa cctcggcacc ttcaaggcgg cgattccggg cctcgccgaa
     1501 gtgtcgatcg ggcacgcgct gattggcgaa gcgctgtacc agggtctcgc gaccacggtg
     1561 cgccattacc tgcagatcct gcgctagccg acgcgacgcg tgccggccgc atcggcggtg
     1621 ccaggtgaaa cccgccccgt cgcggcctgg cttccccctt gcgggtcacg cacagcggcg
     1681 gggagccgaa ggggttcccg actgggtgcg ccctgcgccg atgacgtcgc gctgaaactc
     1741 gcctcgcaaa gccccggcct gtgctcttgc ggatcgagat tcgtcccggc acgcagtggc
     1801 ggggagcagg cacgaatccg gcgcgaatcc ccggtgatgg gtccgggcca gcaagcggcg
     1861 atgggtacaa aaacgcccat ccccgcacga ggcggggatg ggcgcgggta acgcaacgga
     1921 acgtatcgcg tcttactggt tgtcgctgtc ggtaaaaccg atcttgacca ggttgtactg
     1981 cttggcgtcg gccagcacgg tagcgacgta ctggtaggcg acggcatccg cggccttgat
     2041 ctggatttcc ggctggttgg tctgctgcgc caccaccgcg aactgcgcct tgaggccgtt
     2101 ctcatccacc ggcgtgttgt tccagtagag cgcgccgccc tggtcgatct tgaggctgat
     2161 cggctccgcc gggttgtccg gctggtgcac gttcgggttc ggctggggca gatcgatctt
     2221 gatcttttcc agcgggatcg gcgccgtgat catgaagatg atcagcagca ccagcagcac
     2281 gtcgaccagc ggcgtgacgt tgatttcggc catcgggccg gaggatttct gcacacctgc
     2341 catcgtttac tccccggcgc tcggcagcgg cgcttgcgtc atgaagccga cgtgcaccat
     2401 gccctggccc ttggcgtcac cgatggcctt gcgcaccacc ttccactcga tgttcttgtc
     2461 ggcgcggatc tgcagctccg gctgcggcga cttctgcgcc tcgatcgcca gctggccctt
     2521 gagctcctgc tcggacacca ggtgatcctg gtaatacatc gagccgtcgt ccttgatggc
     2581 gaggtcgagc ggcggcgtgt cgatcttcgc ctcgtcgctc ttcgggttgg caagcggcac
     2641 cgtg
//
LOCUS       DASSVL010000025         2106 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_876189, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000025 DASSVL010000000
VERSION     DASSVL010000025.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2106)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2106)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2106
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_876189"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            12..128
                     /locus_tag="VFM52_00425"
     CDS             12..128
                     /locus_tag="VFM52_00425"
                     /EC_number="4.4.1.21"
                     /inference="COORDINATES: protein motif:HMM:NF014694.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0043768 - S-ribosylhomocysteine lyase
                     activity [Evidence IEA];
                     GO_process: GO:0009372 - quorum sensing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S-ribosylhomocysteine lyase"
                     /protein_id="HET8763663.1"
                     /translation="MPYANIEQCGNYRDHSLADAQRVAREILAHRAHWLEAA"
     gene            125..1270
                     /locus_tag="VFM52_00430"
     CDS             125..1270
                     /locus_tag="VFM52_00430"
                     /EC_number="4.2.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015448967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030554 - adenyl nucleotide binding
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0017000 - antibiotic biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sedoheptulose 7-phosphate cyclase"
                     /protein_id="HET8763664.1"
                     /translation="MSNPAPRWQVRATRPIAYDVVKTPALFASHGTALLDYGRPGGRR
                     FVVVDANVMRLHGATIRAWFVAHDIDARLVAVDGGEEHKTIETYQALARQLDAFPIHR
                     RDEPIIAIGGGVLTDVAAFLAASYRRGLPHLKVPTTLMGYIDAALGIKTGINFNGRKN
                     RLGSFTPPEAVLLDPGFLRTLPRRQLSNGVCEILKLALVCDAGLFALLERDGAPAIAA
                     AFTGAAGEAILDRAIDGMLAELAPNLYEEELARKVDFGHTFSYGLEASYPQRLLHGEA
                     VLLDCLVSVLIAQRRGLLAANAVDRVFALVERLGLAPDHTLLDAGAMWQSLLDRVEHR
                     NGLQRVPLPAGIGGCTFVHDITRGELDAALRALCARLEARHELACER"
     gene            1248..1958
                     /gene="ubiG"
                     /locus_tag="VFM52_00435"
     CDS             1248..1958
                     /gene="ubiG"
                     /locus_tag="VFM52_00435"
                     /EC_number="2.1.1.222"
                     /EC_number="2.1.1.64"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015448966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008689 - 3-demethylubiquinone-9
                     3-O-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0006744 - ubiquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 2-polyprenyl-6-hydroxyphenol
                     methylase/3-demethylubiquinol 3-O-methyltransferase UbiG"
                     /protein_id="HET8763665.1"
                     /translation="MNSPVNVDPAEIEKFDRVAKLWWNPAGKMGMLHVINPLRTRFIA
                     DHVTLAGARAVDIGCGGGILAEALARAGAAVTGIDQSTFTLEIARQHAAPSGLAIDYR
                     LQTVEELTACEAGQYDVVTCMEMLEHVPDPAAVVAACARLLRPGGRAFFSTINRSFKA
                     WLFAIVGGEYVLRILPRGTHQYAKLIRPDELRAWTARSGLECLGVASLMYNPFARRFR
                     VAPGRADVNYMASFSKRS"
BASE COUNT          306 a          767 c          701 g          332 t
ORIGIN      
        1 acgcgggcgc cgtgccgtac gccaatatcg agcagtgcgg caattaccgc gaccacagcc
       61 ttgccgacgc gcagcgcgtg gcgcgcgaga tcctcgccca ccgcgcgcac tggctggagg
      121 cggcatgagc aatcctgcgc cgcgctggca ggtgcgcgcc acgcgcccga tcgcctacga
      181 cgtggtgaag acgccggcgc tgttcgcgtc gcacggcacg gcgctgctcg actatggccg
      241 cccgggcggg cgccgcttcg tggtggtcga tgccaatgtg atgcgcctgc atggcgcgac
      301 gatccgcgcc tggttcgtcg cgcatgacat cgacgcgcgc ctcgtcgcgg tcgacggcgg
      361 cgaggaacac aagaccatcg agacgtatca ggcgctcgcc cgccagctcg atgcctttcc
      421 gatccaccgc cgcgacgaac ccatcatcgc catcggcggc ggcgtgctca ccgacgtggc
      481 ggcctttctc gccgccagct accggcgcgg gctgccgcac ctcaaggtgc ccaccaccct
      541 gatgggctac atcgacgccg cgctgggcat caagaccggc atcaacttca acggccgcaa
      601 gaaccggctg ggcagcttca cgccgccgga ggcggtgctg ctcgatccgg gtttcctgcg
      661 caccctgccg cgccggcagc tgtcgaatgg cgtgtgcgaa atcctcaagc tggcgctggt
      721 ctgcgacgcc ggcctgttcg ccctgctgga gcgcgatggc gcaccggcca tcgccgccgc
      781 gttcacgggc gcggcgggcg aggccatcct cgatcgcgcc atcgacggca tgctggcgga
      841 gctggcgccc aacctctacg aggaagaact cgcgcgcaag gtcgattttg gccacacctt
      901 cagctacggg ctggaggcga gttatccgca gcgcctgctg catggcgagg cggtgctgct
      961 ggattgcctg gtttcggtgc tgatcgcgca gcggcgcggg ctgctcgccg ccaacgccgt
     1021 ggatcgcgtg tttgcgctgg tggagcgcct cggccttgcc cccgaccaca cgctgctcga
     1081 cgccggcgcg atgtggcaat ccctgctgga ccgcgtcgag caccgcaatg gcctgcaacg
     1141 cgtgccgctg cccgccggca tcggcggctg cacctttgtc catgacatca cccgcggcga
     1201 actcgacgcc gcgttgcgcg ccctgtgcgc ccgcctcgag gcccgccatg aactcgcctg
     1261 tgaacgttga tcccgccgag atcgagaaat tcgaccgcgt cgccaagctg tggtggaacc
     1321 cggccggcaa gatgggcatg ctgcatgtca tcaacccgct gcgcacgcgc ttcatcgccg
     1381 accacgtcac gctggccggc gcccgggcag tggatatcgg ttgcggcggc ggcatcctag
     1441 ccgaggcgct ggccagggcc ggcgccgcag tgaccggcat cgaccagtcc acgttcacgc
     1501 tggaaatcgc ccgccaacat gcggcgccat cgggcctcgc catcgactac cgcctgcaga
     1561 cggtggaaga actgaccgcg tgcgaagccg gacagtacga cgtggtcacc tgcatggaga
     1621 tgcttgaaca cgtgcccgat ccggccgccg tggtggccgc ctgcgcgcgc ctgctcaggc
     1681 ccggcggccg cgcgttcttc tccaccatca accgcagctt caaggcctgg ctgttcgcca
     1741 tcgtcggcgg cgaatacgtg ctgcgcatcc tgccgcgcgg cacccaccag tacgccaagc
     1801 tgatccggcc cgacgagttg cgcgcgtgga cggcgcgcag cggccttgaa tgcctcggcg
     1861 tggccagcct catgtacaac cccttcgcgc gccggttccg cgtcgcgccg gggcgcgcgg
     1921 acgtcaacta catggccagc ttcagcaagc ggagctgagc gatgaaaaaa ttcctggccc
     1981 tctcgcgctc cggccacggc gtgctcgacc tcatgatgac cggcttggcg gcgctgcttt
     2041 ggctggggcg tttcccggcc tggccggtgc tgctggtggc cgtcgtgacc gccgccgccg
     2101 gctaca
//
LOCUS       DASSVL010000026         2115 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1342340,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000026 DASSVL010000000
VERSION     DASSVL010000026.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2115)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2115)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2115
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1342340"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..815
                     /locus_tag="VFM52_00440"
     CDS             <1..815
                     /locus_tag="VFM52_00440"
                     /EC_number="2.5.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017460984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003849 - 3-deoxy-7-phosphoheptulonate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase"
                     /protein_id="HET8763666.1"
                     /translation="IVMRVYFEKPRTTIGWKGLINDPDLDGSFRINHGLRVARKLLQD
                     INARGVPAGSEFLDMISPQYLADLVAWGAIGARTTESQVHRELASGLSCPVGFKNGTD
                     GNVKVAVDAVQAAAHAHHFLAVTKQGQAAIAATSGNHDCHVILRGGKAPNYDAASVDT
                     ACTAIGKAGLPPHVMIDASHANSGKRPENQPRVVADIGAQVATGETRIVGVMVESHLV
                     AGRQDLAAGRPLTYGQSITDGCLGWDDSVRVLEQLAEAVRRRRAVVRDEIAA"
     gene            865..1140
                     /locus_tag="VFM52_00445"
     CDS             865..1140
                     /locus_tag="VFM52_00445"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007804674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HET8763667.1"
                     /translation="MTLDIQHARALKRFQVVVDGSTCALDYLLDGNVMGITHTEVPPA
                     VGGRGIAGELVRTALDYARSRGWKVMPVCSYAAAWIERHPAYRDLVA"
     gene            1137..1817
                     /locus_tag="VFM52_00450"
     CDS             1137..1817
                     /locus_tag="VFM52_00450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008434391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1345 domain-containing protein"
                     /protein_id="HET8763668.1"
                     /translation="MNDRARASRPGLRWRPLHFIRSRPWLSTCTTVFVLAVAMLALAG
                     VPPASALLLGFDLGALIYLIALSQVFRRASGERVAREARRQDSGRRATLAVAVIVSLV
                     VLLALATELHGAKQGGVPAVAVAAASVVLSWLFMNTSFALHYAHAYYGDDGRPHGGLQ
                     FPSAPQPDYWDFVYFSFVIGMCFQTSDVTVDGRHMRHLALLHSVVAFFFNVFILAISV
                     SVVGGLAG"
     gene            complement(1990..>2115)
                     /locus_tag="VFM52_00455"
     CDS             complement(1990..>2115)
                     /locus_tag="VFM52_00455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019300350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF520 family protein"
                     /protein_id="HET8763669.1"
                     /translation="AQINGDKLRVSGKKRDDLQAAMAVLRKADVELSLQFDNLRD"
BASE COUNT          295 a          739 c          733 g          348 t
ORIGIN      
        1 atatcgtcat gcgcgtgtac ttcgagaaac cgcgcaccac gatcggctgg aaggggctga
       61 tcaacgaccc cgatctcgat ggcagcttcc gcatcaacca cggtctgcgc gtggcacgca
      121 agctgctgca ggacatcaac gcgcgcggcg tgccggccgg cagtgaattc ctcgacatga
      181 tctcgccgca gtacctcgcc gacctcgtcg cctggggcgc cattggcgca cgcaccaccg
      241 agagccaggt gcatcgcgag ctggcctctg gcctgtcgtg tccggtcggc ttcaagaacg
      301 gcaccgacgg caacgtcaag gtcgccgtgg atgcggtaca ggccgcggcg cacgcccacc
      361 atttcctcgc cgtcaccaag cagggccagg ccgcgatcgc ggcgaccagc ggcaaccacg
      421 actgccacgt gatcctgcgt ggcggcaagg cgcccaacta cgacgccgcc agtgtcgaca
      481 ccgcgtgcac cgcgatcggc aaggccggct tgccgccgca cgtgatgatc gatgccagcc
      541 atgcgaacag cggcaagcgc ccggaaaacc agccgcgcgt ggtcgccgac atcggcgcgc
      601 aggtggcgac gggcgaaacg cgcatcgtcg gcgtgatggt cgaaagccac ctcgttgccg
      661 gtcgccagga tctcgccgcc ggtcgcccgc tgacctacgg ccagagcatc accgacggct
      721 gcctgggctg ggacgattcg gtgcgcgtgc tggaacagct ggccgaggcc gtgcgccggc
      781 gccgcgccgt cgtgcgcgac gaaatcgccg cctgacgccg cgcgcgtcgc gtatgctggc
      841 ggctttcctg accaggcgac tggcatgaca ctcgatatcc agcatgcgcg tgcgctgaag
      901 cggttccagg tggtggtgga cggcagcacc tgcgcgctcg actacctgct cgacggcaac
      961 gtcatgggca tcacccacac cgaggtgccg ccggcggtcg gcgggcgcgg tatcgccggc
     1021 gagctggtgc gcacggcgct cgactacgcg cgctcgcgcg gctggaaggt gatgccggtg
     1081 tgctcctacg ccgcggcgtg gatcgagcgc catccggcgt accgggatct cgtggcgtga
     1141 acgatcgcgc gcgcgcatcg cgccccggcc tgcgctggcg gccgctgcac ttcatccgtt
     1201 cgcggccgtg gctcagcacc tgcacgacgg tgttcgtgct ggcggtcgcg atgctggcgc
     1261 tggccggcgt gccgccggcc tcggccttgc tgctgggctt cgacctgggc gcgctgatct
     1321 acctcatcgc gctgtcgcag gtgttccggc gcgcttccgg cgagcgcgtc gcacgcgagg
     1381 cgcggcggca ggacagcgga cggcgcgcga cgctggcggt ggcggtcatc gtctcgctgg
     1441 tggtgctgct ggcgctggcg accgagctgc acggcgcgaa gcagggcggc gtgccggcgg
     1501 tggcggttgc cgcggccagc gtcgtgctgt cgtggctgtt catgaacacc agcttcgcgc
     1561 tgcactacgc gcatgcgtac tacggcgacg acggccgccc gcatggcggc ctgcagtttc
     1621 ccagcgcgcc gcagccggac tactgggatt tcgtctattt ctcgttcgtg atcggcatgt
     1681 gcttccagac ctcggacgtc actgtcgacg gccggcacat gcgccacctc gcgctgctgc
     1741 acagcgtggt cgcgttcttc ttcaacgtgt tcattctcgc gatcagcgtg agcgtggtgg
     1801 gtggcttggc cgggtaggcg ggtgcctggg ccgcagaaat catccgggct gcgacgcccg
     1861 ccgcgcggtg cagcctggcg ccgcttcttg ccgcatagaa ccactatggg gcggcgaacc
     1921 gtcaccaacc tgcccacgcg cggcgagctt ctcgcctcga atgtttctac ggcccaggct
     1981 cccggcgcgt cagtcgcgca ggttgtcgaa ctgcagcgac agctcgacgt cggccttgcg
     2041 caacaccgcc atggccgcct gcaggtcgtc gcgcttcttg ccgctgacgc gcagcttgtc
     2101 gccgttgatc tgcgc
//
LOCUS       DASSVL010000027         3354 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_353640, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000027 DASSVL010000000
VERSION     DASSVL010000027.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3354)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3354)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3354
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_353640"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(44..355)
                     /gene="pilV"
                     /locus_tag="VFM52_00460"
     CDS             complement(44..355)
                     /gene="pilV"
                     /locus_tag="VFM52_00460"
                     /inference="COORDINATES: protein motif:HMM:TIGR02523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus modification protein PilV"
                     /protein_id="HET8763670.1"
                     /translation="MMRNRWRHGGGPSRGMAAQRGVGMIEVLVAVLVLSIGFVGIAAL
                     QARSLSTNNSAMARSMATVDSYSILDAMRADLANAVANSYDGTVVGDACPAAGTALAT
                     V"
     gene            complement(352..966)
                     /locus_tag="VFM52_00465"
     CDS             complement(352..966)
                     /locus_tag="VFM52_00465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007804850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015627 - type II protein secretion
                     system complex [Evidence IEA];
                     GO_process: GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GspH/FimT family pseudopilin"
                     /protein_id="HET8763671.1"
                     /translation="MRSLKPTISRVRCRATAFRPASRGGFTLVELMVTIAVAAVLLMI
                     AVPSYRNIINANRLSTAANEMVGALNVARMEAIKRNGSVQFCSNASANNTGDTLGSAC
                     GTQGGAVYVQTGSAAGPAATRVRTSVAALTAPVVLHGNITAVRYHGDGLAYAIGGTGP
                     YDSTTAGEALADLCVAALSSNNHIQINIAAGSVVTTTTSTGACP"
     gene            1192..>3354
                     /gene="rapA"
                     /locus_tag="VFM52_00470"
     CDS             1192..>3354
                     /gene="rapA"
                     /locus_tag="VFM52_00470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015447151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016817 - hydrolase activity, acting on
                     acid anhydrides [Evidence IEA];
                     GO_function: GO:0140658 - ATP-dependent chromatin
                     remodeler activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase-associated protein RapA"
                     /protein_id="HET8763672.1"
                     /translation="MFVPGQRWISTAEPELGLGTVLRVEGRGVQVLFAKAGVLRPYAI
                     DSAPLVRAEFRPGQRVAGKGIAFLVERVEIKDELLTYRGEGRELGEGQLDDEQSVSHA
                     DDRLIGGRTDTVAQFELRLEGLRRRAEARRSPTWGLGSARVGLIAHQLRVAGIAAARR
                     PPRVLLADEVGLGKTIEAGMIIARQLATGRASRVLLLLPEALVYQWFVELLRRFNLAF
                     AIYDEERCAALALAAEGGPVANPFDDEQLVIAEFGLLEANPKRAQQLLDASWDLLVVD
                     EAHHLAWTPEDASPRYALVEQLAAKTPGVILLTATPEQLGRKGHFARLRLLDPQRYHD
                     LDTYLAEVERFQPLSRIADKLLDGEPLDAAQLTALHTAFAGDAALEAHLAALDPKAAT
                     PEHAHAILAALIDRHGTGRVMFRNRRAGIGGFPQRKLAWQLIPADDVDASMRQALLVE
                     FQADIQQPPPASTHDYANDPRILALVALLDAHPQDKFLLICRTQAKVLALEEALRTRT
                     GAGIARFHEGLGIVQRDRNAAYFAQPDGARLLLCSEIGSEGRNFQFAHRLVLWDLPLD
                     PDLLEQRIGRLDRIGQRHDITIHLLAVADSAQHVLARWYAEGVDAFTHSPADGRELLR
                     RFGEPLAELADQHARGDDARDQELDALLAETRAAHEEMAALIRHGRDRLLELSASHDP
                     HADELAQAFAREDDDPGRDAFVLRLLEAWGIHGEELGNH"
BASE COUNT          522 a         1212 c         1132 g          488 t
ORIGIN      
        1 ctgcgcccaa ccctgccgcc agctgggtgc accattgatt caactacacg gtcgccagcg
       61 ccgtacctgc cgccgggcag gcatcgccga cgaccgtgcc gtcataggaa ttcgccacgg
      121 cattggcaag gtccgcacgc atcgcgtcga ggatggaata gctgtcgacc gtggccatgc
      181 tgcgggccat ggcgctgttg ttggtggaca gcgagcgggc ctgcagcgcg gcgatgccga
      241 cgaagccgat ggacagcacc agcactgcca ccagcacctc gatcatgccc acgccgcgct
      301 gcgccgccat gccgcgcgac ggaccgcccc cgtggcgcca gcggttacgc atcatgggca
      361 ggcccccgtg gaagtggtgg tggtgacgac cgaaccggcg gcgatattga tctggatatg
      421 gttgttgctg ctcagcgccg ccacgcacaa atcggccagc gcctcaccgg cagtggtgct
      481 gtcgtagggt ccggtaccgc cgatggcgta agccagcccg tcgccgtggt aacgaacggc
      541 ggtgatattg ccgtgcagca ccaccggcgc cgtcaacgcg gccacgctgg tgcgtacccg
      601 ggtggccgca gggccggcgg cgctgccggt ctgcacgtag acggcgccgc cctgggtgcc
      661 gcaagcactg cccagcgtat cgccggtgtt gttggcactg gcattgctgc aaaactgcac
      721 cgacccattg cgcttgatcg cctccatgcg tgccacgttg agcgcgccca ccatttcgtt
      781 ggcggccgtg ctcagccggt tggcgttgat gatgttgcga tagctcggca cggcaatcat
      841 cagcaaaacg gcagctaccg cgatcgtcac catcagttcg accagcgtga aaccgcctcg
      901 gcttgccggc cgaaaagcgg tggcgcgaca acggacgcgc gaaatcgttg gcttcaggct
      961 gcgcatgtct ccccccgcgt acggcgccga aatctactcg cgccctccgg ggccggcgga
     1021 tcgacgccga ccagcggaac cattcggccg acaagcggca catgccaccg ctgcaaccgg
     1081 ccgcaggtca cacttgccgg ccagggcatt cgtcgccgcg ccggccggca actgtgcacc
     1141 gccgccgcca acgcggataa ttggcgcccc tcgaacgcaa gtggctgcgc catgtttgtc
     1201 cccggtcaac gctggatctc caccgccgag cccgagctcg gtctcggcac cgtattgcgc
     1261 gtggagggcc gtggcgtgca ggtgctgttc gccaaggccg gggtgctgcg cccgtacgcg
     1321 atcgactccg cgccgctggt gcgcgccgag ttccggcccg gccagcgcgt ggccggcaag
     1381 ggcatcgcgt ttcttgtcga gcgggtggag atcaaggacg agctgctgac ctaccgcggc
     1441 gaaggccgcg agctgggcga aggccagctc gacgacgagc agagcgtgag ccacgcggac
     1501 gaccgcctga tcggcgggcg caccgacacc gtcgcgcaat tcgagctgcg cctggaaggc
     1561 ttgcgccggc gtgccgaggc gcggcgctcg ccgacctggg gcctgggctc ggcccgcgtc
     1621 gggctgatcg cccaccagtt gcgcgtagcc ggcatcgccg ccgcgcgacg cccgccacgc
     1681 gtgctgctgg ccgacgaggt gggcctgggc aagaccatcg aggcgggcat gatcatcgcg
     1741 cgtcagttgg cgaccggccg cgcctcgcgc gtgctgctgc tgttgccgga agcgctggtg
     1801 taccagtggt tcgtcgagtt gctccgccgg ttcaacctgg cgttcgcgat ctacgacgag
     1861 gagcgctgcg cggcgctggc gctggcggcc gaaggcggcc cagtggccaa tccgttcgac
     1921 gacgagcaac tcgtgatcgc ggagttcggc ctgctcgaag ccaacccgaa acgcgcgcaa
     1981 caattgctgg atgcctcgtg ggatctgctg gtggtggacg aagcgcacca cctggcgtgg
     2041 acgccggagg atgccagccc gcgctacgcg ctggtggagc aactggccgc caagacgccc
     2101 ggcgtcatcc tgctcaccgc cacgcccgag cagcttggcc gcaagggcca cttcgcgcgc
     2161 ctgcgcctgc tcgacccgca gcgctatcac gacctcgata cctacctcgc cgaggtcgag
     2221 cgcttccagc cgctgtcgcg gattgccgac aagctgctgg acggcgaacc gctggacgct
     2281 gcccagctca ccgcactgca caccgcgttt gccggcgatg cggcgctgga agcacacctc
     2341 gcggcgctcg accccaaggc cgccacgccg gaacacgcgc acgccatcct cgccgcgctg
     2401 atcgaccgcc acggcaccgg gcgggtgatg ttccgcaacc ggcgcgccgg catcggcggc
     2461 tttccgcagc gcaagctggc gtggcaactg atcccggccg acgacgtgga cgcgtcgatg
     2521 cggcaggcct tgctggtgga gttccaggcc gacatccagc aaccgccgcc ggccagcacg
     2581 cacgactacg ccaacgaccc gcgcatcctg gcactggtgg ccctgctcga cgcccacccg
     2641 caggacaagt tcctgctcat ctgccgcacc caggccaagg tactggcact ggaggaggcg
     2701 ttgcgcacgc gcaccggcgc cggcatcgcg cggttccacg aagggctcgg catcgtgcag
     2761 cgcgaccgca acgccgcgta tttcgcccag ccggatggcg cgcgcctgtt gctgtgctcg
     2821 gagatcggct ccgaggggcg caattttcag ttcgcgcatc gcctggtgct gtgggacctc
     2881 ccgctcgacc ccgacctgct cgaacagcgc atcggccggc tcgaccgcat cggccagcgg
     2941 cacgacatca ccatccacct gctggccgtc gccgacagcg cgcagcacgt actggcgcgc
     3001 tggtacgccg aaggcgtgga tgcattcacc cacagcccgg ccgatggccg cgagctgctg
     3061 cgccgcttcg gtgagccgct ggcggaactc gccgatcagc atgcgcgcgg cgacgacgca
     3121 cgcgaccagg agctggatgc gctgctggcc gagacccgcg ccgcgcacga ggaaatggcc
     3181 gcgctgatcc gccatggccg cgaccgcctg ctggagctct ccgccagcca cgatccgcac
     3241 gccgacgagc tggcgcaggc gttcgcccgc gaggacgacg accccggccg cgatgccttc
     3301 gtgctgcgcc tgctcgaagc ctggggcatc cacggcgagg agctcggcaa ccac
//
LOCUS       DASSVL010000028         2387 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_961074, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000028 DASSVL010000000
VERSION     DASSVL010000028.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2387)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2387)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2387
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_961074"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1731)
                     /locus_tag="VFM52_00475"
     CDS             complement(<1..1731)
                     /locus_tag="VFM52_00475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007810153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0009267 - cellular response to starvation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbon starvation CstA family protein"
                     /protein_id="HET8763673.1"
                     /translation="MQAAMVPPSTSPAAKIAWAALAIVGAFCLGVVALRRGEPINAIW
                     LVAASLAIFTIGYRFYGKFVEHSVLKLDPSRAPPSVLRNDGLDYVPTDKWVVFGHHFA
                     AIAGAGPLVGPVLAAQMGYLPGTLWILFGVVFAGAVQDFMILGLSLRRDGRSLGHMLR
                     EELGPIPGLVAMIGVLVLMMIVLAVLALVVVKALVHSPWGTFTVAATIPIAFLMGAYL
                     HWFRPGRILEISVVGLALLLLAIWGGRFIAESATLAPIFDLDAKALAWWLIGYGAVAS
                     ILPVWLLLAPRDYLSTFLKIGTIGLLALAIVLAAPDMQMPAVTKFIDGTGPVFAGNLF
                     PFLFITIACGAVSGWHSIIASGTTPKLLANEGQARMVGYGGMLCEAFVAIMALIAAAS
                     LHPGVYFAMNSPNAIIGTTVQQAAETISQWGFVVTPDELLQTAHEVGEQTILARAGGA
                     PTLAVGMAQLLHNILPGEGMLAFWYHYAILFEALFILTTVDAGTRVGRFMIQEIAGLI
                     HKPLQATESWTGNLLATAVCVLLWGYFLYQGAVDPLGGINTLWPLFGIANQMLAAIAL
                     MLATVVVVKLK"
     gene            1907..>2387
                     /gene="def"
                     /locus_tag="VFM52_00480"
     CDS             1907..>2387
                     /gene="def"
                     /locus_tag="VFM52_00480"
                     /EC_number="3.5.1.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007507222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042586 - peptide deformylase activity
                     [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide deformylase"
                     /protein_id="HET8763674.1"
                     /translation="MIREILKMGDPRLLRVAPPVPGKMLGSAELDALVADMFETMHAA
                     DGVGLAAPQIGVDLQLVIFGFEHSPRYPDAPEVPQTILLNPHVTPLSQDMEEGWEGCL
                     SVPGLRGAVNRYTLIRYQGVDPHGKPIDRNASGFHARVVQHECDHLIGRLYPSRITDF
                     "
BASE COUNT          424 a          804 c          806 g          353 t
ORIGIN      
        1 cttgagtttc accaccacca cggtggccag catcagcgcg atcgccgcca gcatctggtt
       61 ggcgatgccg aacagcggcc acagcgtgtt gatgccgccg agcggatcga ccgcgccttg
      121 gtacaggaag tagccccaca gtagcacgca cacggcggtc gcgagcaggt tgccggtcca
      181 cgactcggtg gcctgcagcg gcttgtggat gaggccggcg atctcctgga tcatgaagcg
      241 gccgacgcgg gtgccggcat ccaccgtggt caggatgaac agcgcctcga acaggatcgc
      301 gtagtggtac cagaacgcga gcatgccttc gccgggcagg atgttgtgca gcagctgcgc
      361 catgccgacg gccagcgtcg gtgcgccgcc ggcgcgggcg aggatggtct gctcgcccac
      421 ctcgtgcgcg gtctgcagga gttcgtccgg ggtcaccacg aagccccatt ggctgatggt
      481 ttccgccgcc tgctgcacgg tggtgccgat gatcgcgttc ggcgagttca tcgcgaagta
      541 cacgccgggg tgcagcgatg cggcggcgat cagcgccatg atcgcgacga acgcctcgca
      601 cagcatgccg ccgtagccca ccatccgcgc ctggccctcg ttcgccagca gcttgggcgt
      661 ggtgccggag gcgatgatcg agtgccagcc ggacaccgcg ccgcaggcga tggtgatgaa
      721 caggaacggg aacaggttgc cggcgaacac cgggccggtg ccgtcgatga acttggtcac
      781 cgccggcatc tgcatgtccg gcgcggccag cacgatcgcc agcgcgagca ggccgatggt
      841 gccgatcttg aggaaggtcg acaggtagtc gcgcggcgcg agcaacagcc acactggcag
      901 gatcgacgcg accgcgccgt agccgatcag ccaccacgcc agcgccttcg catccaggtc
      961 gaagatcggc gcgagcgtgg ccgactcggc gatgaagcgg ccgccccaga tcgcgagcaa
     1021 cagcagcgcc aggccgacta ccgagatttc gagaatgcgg ccggggcgga accagtgcag
     1081 gtaggcgccc atcaggaacg cgatcggaat cgtcgcggcc acggtgaacg tgccccacgg
     1141 gctgtgcacc agcgccttga ccacgaccag cgcgagcacc gccagcacga tcatcatcag
     1201 caccagcacg ccgatcatcg cgaccaggcc ggggattggc cccagctcct cgcgcagcat
     1261 gtggccgagc gagcggccgt cgcgacgcag cgaaaggccg aggatcatga agtcctgcac
     1321 cgcgccggcg aacaccactc cgaacaggat ccacagcgtg cccggcaggt agcccatctg
     1381 cgcggccagt accggaccga ccagcgggcc ggcgccggcg atcgcggcga agtggtggcc
     1441 gaacaccacc cacttgtcgg tcggtacgta gtcgaggccg tcgttgcgca acaccgaagg
     1501 tggcgcgcgc gacggatcga gcttgagtac cgagtgctcg acgaacttgc cgtagaagcg
     1561 gtagccgatg gtgaagatgg cgagcgacgc ggccaccagc cagatcgcgt tgatcggctc
     1621 gccgcgccgc agcgcgacca cgccgaggca gaacgcaccg acgatcgcca gcgcggccca
     1681 ggcgatcttc gccgccgggc tcgtgctggg tggaaccatt gcagcttgca tggcttctct
     1741 cccgaaagac tttcctaggt tcctgcccgc cacggggtcg ggtcaatcca aaacggccta
     1801 ggctttggtc gaattgcgct gcactgcatc acgcgaccat ctgtccacgt tgatgtcatg
     1861 caccgcctgc taccgtaggc gcgtcgtggc cgccatggag gtccggatga ttcgcgaaat
     1921 cctgaagatg ggtgacccgc gattgctgcg ggtggcgccg ccggtaccgg gcaagatgct
     1981 gggcagcgcc gagctcgacg cgctggtggc cgacatgttc gagaccatgc acgccgccga
     2041 tggcgtcggc ctcgcggcgc cgcagatcgg tgtcgacctg cagctcgtca tcttcggctt
     2101 cgagcattcg ccgcgttacc ccgatgcccc ggaagtgccg cagaccattc tgctcaaccc
     2161 gcacgtcacg ccgttgtcgc aggacatgga ggaaggctgg gaaggctgcc tgtccgtgcc
     2221 cggcctgcgc ggtgcggtga atcgctacac gctgatccgc taccagggtg tcgacccgca
     2281 tggcaagccg atcgaccgca acgcgtcggg gttccacgcg cgcgtcgtgc agcacgagtg
     2341 cgaccacctg atcggccggc tgtacccctc gcgcatcacc gacttca
//
LOCUS       DASSVL010000029         2974 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_410130, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000029 DASSVL010000000
VERSION     DASSVL010000029.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2974)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2974)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2974
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_410130"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(21..875)
                     /locus_tag="VFM52_00485"
     CDS             complement(21..875)
                     /locus_tag="VFM52_00485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008438588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HET8763675.1"
                     /translation="MSRLSIILPAKNEAPALVTLLPALRAAYPDAEIIVVNDGSTDDT
                     AAICAGAGVTCLTSPYSMGNGASIKRGARAASGDICVFMDGDGQHSAADVARLLQKLD
                     EGYDMVVGARDWGSQAGVGRGLANTLYNWLATHMTGHVVADLTSGFRAVRAEKFREFI
                     YLLPNGFSYPTTSTMAFFRNAYAVAYVPIKAAQRIGKSHIKPLRDGLRFLLIIFKIAT
                     LYSPLKLFVPTSAVFFLLGCANYAWTFLHDGRLTNGSTLLWSMAVIVFLIGLVSEQIT
                     ALTYRKDS"
     gene            1113..>2974
                     /gene="pilB"
                     /locus_tag="VFM52_00490"
     CDS             1113..>2974
                     /gene="pilB"
                     /locus_tag="VFM52_00490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017910390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0009297 - pilus assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type IV-A pilus assembly ATPase PilB"
                     /protein_id="HET8763676.1"
                     /translation="MSTAMPSPLAGLTGLARRLVAEGLLPEADARRAMLDSNQQRATL
                     TTWLLDHNLVDGNHLLRLLSHEFGMPMMDVSAIDPARMPLNLISEELINRHHALPLFQ
                     RGKRLFVGIADPMQLNALEEIKFHSACMVEPILIERAQLNRAVDVALSSMHDVMPDLG
                     GDDLDELSTEGGEGDEAAGTGPGIDANANDDAPVVKFVNKVLVDAIRRGASDIHFEPY
                     ESQYRVRVRIDGMLRAVASPPLKLASRIASRLKVMAQLDIAEKRIPQDGRIKLNLSKN
                     RAIDFRVSSLPTLFGEKIVLRILDSSAAKIGIEKLGYEPGQQKLYVDAIHKPYGMVLV
                     TGPTGSGKTVSLYTGLNMLNTAERNISTVEDPVEIRVEGINQVQQNAKRGMTFASALR
                     SFLRQDPDVIMVGEIRDLETAEIAIKAAQTGHMVLSTLHTNDAPQTLTRMVDMGVKPY
                     AIATSVSLIIAQRLARKLCNNCKEPIEMSHDALIKEGFTEEDIAAGIKIYRPVGCSSC
                     TDGYKGRTGIYQVMPMLEEIQKIVLRILDSSAAKIGIEKLGYEPGQQKLYVDAIHKPY
                     GMVLVTGPTGSGKTVSLYTCLNMLNSPGVNISTVEDPAEINLPGINQVNVNDKAG"
BASE COUNT          579 a          963 c          959 g          473 t
ORIGIN      
        1 aggcatctta gcccgatccg tcagctatcc ttgcgatacg tcagcgccgt aatctgctcg
       61 gacaccagcc cgatcaggaa cacgatcacg gccatgctcc acagcagcgt gctgccgttg
      121 gtcagccgcc cgtcgtgcag gaaagtccac gcgtagttgg cgcagccaag caggaagaac
      181 acggcactgg taggcacgaa cagcttgagc ggcgagtaca gcgtggcgat cttgaagatg
      241 atgagcagga agcgcaggcc gtcgcgcagc ggcttgatgt ggctcttgcc gatgcgttgc
      301 gcggccttga tcggcacgta ggccactgca taggcattgc ggaagaacgc catggtgctg
      361 gtggtggggt acgagaaacc gttgggcaaa aggtagatga actcgcggaa tttctcggcg
      421 cgcacggcgc ggaagcccga ggtgagatcg gccacgacgt gaccggtcat gtgcgtcgcc
      481 agccagttgt agagcgtgtt ggccagcccg cggccgacgc cggcctggct gccccagtcg
      541 cgcgcgccga ccaccatgtc gtagccctcg tcgagctttt gcagcaggcg cgcgacgtcg
      601 gcggcgctgt gctggccgtc gccgtccatg aacacgcaga tgtcgccgct ggcagcgcgc
      661 gcgccgcgct tgatcgaggc gccgttgccc atcgagtaag gcgaggtgag gcaggtcacg
      721 cccgcgcctg cgcaaatggc cgcggtatcg tcggtggagc cgtcgttgac gacgatgatc
      781 tcggcatccg gataggcggc gcgcagcgcc ggcaacaagg taaccagtgc cggcgcttcg
      841 ttcttcgctg gcaggatgat gctgagacgg ctcacgacaa tggatttccc gagttcagcg
      901 cccatcataa cgtggcgtgg tgggtgtcgc atgccagtca catcgttgcc cttgcgggcc
      961 ggaatgcgcg ccggcaggac gcttggcgag gggttgtcgg gctgaagccc gacctacaaa
     1021 ggcaccctcg tcacgctgct gcagcgccac ggatgacctg cgccacgcgg tgcggtagat
     1081 tcggcgcgtc aagcacttgg ggcacgatct tcatgtcgac tgctatgcca tcgccactcg
     1141 ccgggttgac cgggcttgcg cgtcgtctgg tggccgaagg cctgctgccg gaggccgacg
     1201 cgcgccgcgc catgctggac agcaaccagc agcgggcgac gctcaccacg tggttgctcg
     1261 accacaacct ggtggacggc aaccacctgc tgcgcctgct gtcgcacgag ttcggcatgc
     1321 cgatgatgga cgtctcggcc atcgacccgg cgcgcatgcc gctgaacctc atcagcgagg
     1381 aactgatcaa ccggcatcac gcgctgccgc tgttccagcg cggcaagcgc ctgttcgtcg
     1441 gcattgccga cccgatgcag ctcaacgcgc tggaggagat caagttccat tccgcgtgca
     1501 tggtggagcc gatcctgatc gagcgtgcgc agctcaaccg cgccgtggac gtggcgctgt
     1561 cgagcatgca cgacgtcatg cccgacctgg gtggcgacga cctcgacgag ctcagcaccg
     1621 agggtggcga gggcgacgag gcggccggca ccggccccgg catcgatgcc aatgcgaacg
     1681 acgatgcgcc agtggtgaag ttcgtcaaca aggtgctggt ggatgcgatc cgccgcggcg
     1741 cctcggacat ccacttcgag ccgtacgaaa gccagtaccg ggtacgcgta cgcatcgacg
     1801 gcatgctgcg cgcggtggcc agcccgccgc tgaagctcgc cagccgcatc gcctcgcgcc
     1861 tgaaggtgat ggcgcagctg gacatcgcgg aaaagcgcat cccgcaggac ggccgcatca
     1921 agctgaacct cagcaagaac cgcgcaatcg acttccgcgt gagcagcctg cccacgctgt
     1981 tcggcgaaaa gatcgtgctg cgcatcctcg acagctcagc ggcgaagata ggcatcgaga
     2041 agctgggcta cgagcccggc cagcagaagc tctacgtgga cgcgatccac aagccctacg
     2101 gcatggtgct ggtcaccggc ccgaccggtt cgggcaagac ggtgtcgctg tacaccggcc
     2161 tcaacatgct caacaccgcc gagcgcaaca tctccacggt ggaagacccg gtcgaaatcc
     2221 gcgtcgaagg catcaaccag gtgcagcaga acgccaagcg cggcatgacc ttcgccagcg
     2281 cattgcgttc gttccttcgc caggacccgg acgtgatcat ggtcggcgaa atccgtgacc
     2341 tggaaaccgc cgagatcgcg atcaaggccg cgcagaccgg ccacatggtg ctgtccaccc
     2401 tgcataccaa cgacgcgccg cagaccctca cccgcatggt ggacatgggc gtgaagccct
     2461 acgccatcgc gacttcggtt tcactgatca ttgcgcagcg actggcgcgc aagctctgca
     2521 acaactgcaa ggaaccgatc gagatgtccc acgacgccct catcaaggaa gggttcaccg
     2581 aggaagacat cgccgccggc atcaagattt accggcctgt gggttgcagt tcctgcaccg
     2641 acggctacaa gggacgtacc ggcatctatc aggtgatgcc catgctcgag gagatccaga
     2701 agatcgtgct gcgcatcctc gacagctcgg cggcgaagat cggcatcgag aagctgggct
     2761 acgagcccgg ccagcaaaag ctctacgtgg acgcgatcca caagccctac ggcatggtgc
     2821 tggtcaccgg ccccaccggc tcgggcaaga cggtgtcgct gtacacctgc ctgaacatgc
     2881 tgaactcgcc gggcgtgaac atctccaccg tcgaggatcc tgccgaaatc aacctcccgg
     2941 gtatcaacca ggtcaacgtg aacgacaagg ccgg
//
LOCUS       DASSVL010000030         2187 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_890468, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000030 DASSVL010000000
VERSION     DASSVL010000030.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2187)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2187)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2187
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_890468"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            153..1064
                     /locus_tag="VFM52_00495"
     CDS             153..1064
                     /locus_tag="VFM52_00495"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016208 - AMP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HET8763677.1"
                     /translation="MPTPLTPPHTLLLATDLRARCDRATDRARQLARQWHARLHVVHV
                     LQPTPESWPGSLPELDPEPASPSADAARAQRQLRRTFADDGDAVELHVVEGTPADAIL
                     ELAVAIDCELIVLGTDDEPPVGRLGRVLETLLRRSPLSLLAVRERPRGAYAQVLVGTD
                     FTAESRYGLEAAAAWLPAARLTLMHVLDVAYQSLWLDASHVDPLLAMERDTMQAFLAA
                     TPLPADVLPRLRTRLEHGHAEHMLREVAIAEDTDLVVISAFRRGLAFHILVGGTVRRI
                     VPAAPCDVLLVRTPAQAPAGGPRHDVG"
     gene            complement(1114..1776)
                     /gene="maiA"
                     /locus_tag="VFM52_00500"
     CDS             complement(1114..1776)
                     /gene="maiA"
                     /locus_tag="VFM52_00500"
                     /EC_number="5.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015446778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016034 - maleylacetoacetate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0006559 - L-phenylalanine catabolic process
                     [Evidence IEA];
                     GO_process: GO:0006572 - tyrosine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="maleylacetoacetate isomerase"
                     /protein_id="HET8763678.1"
                     /translation="MASGLVLYGYWRSSAAYRVRIALNLKGLAYESHPVHLVKDGGQQ
                     HAPGYRALNPQQLVPTLCDGERVFTQSLAICEYLEEAFPEPPLLPLDARCRAQVRALA
                     QVVACDVHPLGNLRVLQYLERELGVDEAARKTWSRHWIATGFAAVEAMLGENMNTGRF
                     CHGDTPTLADVCLVPQVYNALRWHVPMDAYPTIARIHAACNELEAFRAAAPECQPDAP
                     PA"
     gene            1887..>2187
                     /gene="pgk"
                     /locus_tag="VFM52_00505"
     CDS             1887..>2187
                     /gene="pgk"
                     /locus_tag="VFM52_00505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015446777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004618 - phosphoglycerate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate kinase"
                     /protein_id="HET8763679.1"
                     /translation="MSVIRMSDLDLNGKRVLIREDLNVPLDEHGQITSTARLDAALPT
                     ILAARNAGAKVMVMSHLGRPKEGQFDAASSLAPVALWLSSKLDQPVRLVADYLVGG"
BASE COUNT          320 a          827 c          732 g          308 t
ORIGIN      
        1 aggcgtcggg gccacccgca cgggcggcgc cgcctgccgg cgtgcgcgca gcgacacggc
       61 gcatcgctgc cgatcgagtc tacaggcggc cgcgagcgcc cggcaaagcc ggtatagtcc
      121 cggccatcgc cggcgtttcc acggaaagcg tcatgcccac gccgctcacg cccccgcaca
      181 cgctgctgct cgccaccgat ctgcgcgccc gctgcgaccg ggcgaccgat cgcgcccgcc
      241 agctcgcacg gcaatggcac gccaggctgc acgtcgtgca tgtgttgcag ccgaccccgg
      301 aaagctggcc cggatcgctg cccgagctcg accccgagcc ggcgtccccc tcggcggatg
      361 ccgcgcgcgc ccagcgccag ctgcgccgta ccttcgcgga cgacggcgac gcagtggaac
      421 tccacgtggt cgaaggcacg cccgccgacg cgatcctcga actggccgtc gcgatcgact
      481 gcgaactgat cgtgctcggc accgacgacg aaccgccggt cgggcgcctg ggccgtgtgc
      541 tggaaaccct gctgcgccgc tcgccgctgt cactgctggc ggtgcgcgag cggccgcgtg
      601 gcgcctatgc ccaggtgctg gtcggcaccg atttcaccgc ggagtcgcgc tacggcctcg
      661 aggccgcggc ggcgtggctg cctgccgccc ggctcacgct gatgcatgtg ctcgacgtgg
      721 cctaccagtc actctggctc gacgccagcc acgtcgatcc gttgctggcg atggaacgcg
      781 acaccatgca ggccttcctc gccgcgacgc cgttgccggc cgacgtcctg ccacgcctgc
      841 ggacgcggct cgaacacggc catgccgagc acatgctgcg cgaggtcgcg atcgccgagg
      901 acaccgacct cgtcgtcatc agcgcgttcc ggcgcggcct cgccttccac atcctggtcg
      961 gcggcaccgt gcgccggatc gtgccggccg cgccgtgcga cgtgctgctg gtgcgcacgc
     1021 cagcccaggc gcccgctggg ggcccacggc acgacgtcgg gtgaagcccg gcacgcccct
     1081 gccgcaagcc acatcaccgg gccggaaaca gcctcaggcc ggcggcgcat ccggctggca
     1141 ttccggcgcc gccgcgcgga aggcttccag ctcgttgcac gcggcgtgga tgcgcgcgat
     1201 cgtcggatag gcatccatcg gcacgtgcca gcgcagcgcg ttgtacacct gcggcaccag
     1261 gcacacgtcg gccagcgtcg gcgtgtcgcc gtggcagaac cggccggtgt tcatgttctc
     1321 gcccagcatc gcctccaccg ccgcaaaacc ggtcgcgatc cagtgccgcg accacgtctt
     1381 gcgcgccgcc tcgtccacgc ccagctcgcg ttcgaggtac tgcagcacgc gcagattgcc
     1441 gagcgggtgc acgtcgcagg caaccacctg cgccagcgcg cgcacctgcg cacggcagcg
     1501 cgcgtcgagc ggcagcagcg gcggctcggg gaaggcctcc tccaggtatt cgcaaatggc
     1561 cagcgactgg gtgaacacgc gctcgccgtc gcacagcgtc ggcaccagtt gctgcgggtt
     1621 caacgcacgg taaccaggcg cgtgctgctg gccgccgtcc ttgaccagat gcaccggatg
     1681 gctctcgtag gcgagcccct tgaggttcag cgcgatgcgc acgcggtagg cggcgctgga
     1741 acgccagtaa ccgtacaaca cgagtccgct ggccatgctg acctcctcgt cgggaatcgg
     1801 cgacagtttg catcaccgca gggcggcccg gacaatacat ggttcctgcc gcctcggcag
     1861 ccctttccaa ccccgggagc cataccgtgt ccgtcatccg catgagcgac ctcgacctca
     1921 acggcaagcg cgtgttgatc cgcgaggatc tcaacgtgcc gctcgacgag cacgggcaga
     1981 tcacctccac cgcgcgcctc gacgccgcgc tgccgacaat ccttgccgcg cgcaacgccg
     2041 gcgcgaaggt gatggtgatg tcgcacctgg gccggccgaa ggaaggccag ttcgatgccg
     2101 cctcctcgct ggcgccggtg gcactgtggc tgagcagcaa gctggaccag ccggtgcggc
     2161 tggtcgccga ttatctggtc ggcggcg
//
LOCUS       DASSVL010000031         2464 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_890513, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000031 DASSVL010000000
VERSION     DASSVL010000031.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2464)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2464)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2464
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_890513"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(1..984)
                     /locus_tag="VFM52_00510"
     CDS             complement(1..984)
                     /locus_tag="VFM52_00510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019464748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase dimerization/phospho-acceptor
                     domain-containing protein"
                     /protein_id="HET8763680.1"
                     /translation="MKAGVAQGATACRDGVFCHRIAWVFAGEFVVAAGICVAAASGWL
                     PLLPALGVLAVATALGWRVARRAWLPVRTLAGLMRGWHVGESDPAVLCPERLARRTDA
                     DLAALTNALHGFAARIADYGMRERNFTRDASHELRTPLTVIRASVDMLGDEGGISESA
                     QRSVRRIHRATRELEALVDVLLILARESDPGCAGERFVVNDVLHRELDAAGELMAGAA
                     VDLRLDEPARFALQGSTRAFAVLCRQLIRDACRQAAAGRVVVTVLPSAVTVSHDAKGA
                     VPCAAANTPVSFELAIAQRISDRFAWPLELPAAGQAGVTRVRFPDSLPAAA"
     gene            complement(1001..1732)
                     /locus_tag="VFM52_00515"
     CDS             complement(1001..1732)
                     /locus_tag="VFM52_00515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008435757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HET8763681.1"
                     /translation="MSGREEQAGLILLVEDNRQIAEAVGEFLETRGYSVDYAADGPSG
                     LHLAVASSYDVIVLDLMLPGLDGLEVCRKLRHDAKKSTPVLMLTARDTLEDKLTGLEA
                     GADDYLVKPFEVRELEARLRALIRRDRRQVSTEVLTVGDMTLDTATLRLTRAGRELTV
                     SPIGLKLLAILMRESPRVVSRRDIEREIWGDMLPDSDTLRSHLYNLRRIIDKPFPRPL
                     LHTIHSAGYRLADLDAEVATAVQTA"
     gene            complement(1808..2425)
                     /locus_tag="VFM52_00520"
     CDS             complement(1808..2425)
                     /locus_tag="VFM52_00520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008212239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arylesterase"
                     /protein_id="HET8763682.1"
                     /translation="MRRFLWLLALLLIGWSGASPAAAPRTVLVLGDSLSAAHNIAAEQ
                     GWVHLLEVRLGKMVPPWAVVNASISGETSLSGRNRLPALLATYRPGVVVIELGANDGL
                     RGLPLAQLRDNLVAMVSAAQATHAKVLLLGIELPLNYGPQYRDGLRAVYADLARQKHV
                     ALLPFLLDGVALDPALMQPDGLHPTAAGEPKVLGNVWPLLQPLLR"
BASE COUNT          409 a          864 c          839 g          352 t
ORIGIN      
        1 tcacgcggcg gcgggcagcg aatcggggaa gcgcacgcgg gtgacgccgg cttggccggc
       61 ggcgggcagt tcgagcggcc aggcaaagcg gtcgctgatg cgctgcgcga tcgccagctc
      121 gaagctgacc ggcgtgttgg cagcagcgca cggcacggca cccttggcgt cgtggctgac
      181 agtcaccgcg gacggcagca cggtgaccac gacgcggcca gccgccgcct gccggcacgc
      241 gtcgcggatc aactgccggc acagcacggc aaatgcgcgc gtcgagcctt gcagcgcaaa
      301 ccgcgccggc tcgtccagcc gcaggtcgac cgccgcaccg gccatcagct cgccagcggc
      361 atccagctcg cggtgcagca cgtcgttcac cacgaagcgt tcgccggcac accccggatc
      421 ggattcgcgc gcgaggatca gcagcacatc gaccagcgcc tcgagctcgc gcgtggcgcg
      481 atggatgcgg cgtaccgaac gctgtgccga ctcgctgatg ccgccctcgt cgccgagcat
      541 gtcgaccgag gcgcggatga cggtgagcgg cgtgcgcaac tcatggctgg catcgcgggt
      601 gaaattgcgc tcgcgcatgc catagtcggc gatgcgcgcg gcgaagccgt gcagcgcatt
      661 ggtcagcgca gccagatcgg catcggtgcg ccgcgccagg cgctccgggc acagtacggc
      721 gggatcggac tcgccgacgt gccagccgcg catcagccct gccagggtac gcaccggcag
      781 ccatgcgcgt cgcgccacgc gccagccgag cgccgtggcc accgccagca cgcccagcgc
      841 cggcaacagc ggcagccagc cgcttgccgc ggcaacgcag atgcccgcgg ccacgacgaa
      901 ctcgccggca aacacccacg cgatgcggtg acagaacacg ccgtcacgac acgccgtcgc
      961 accctgcgcc accccggctt tcatcaccat ttgctgcatt tcatgccgtc tggacggccg
     1021 tcgccacttc cgcatcgaga tccgcgaggc gatatccggc cgaatggatg gtatgtagca
     1081 gcggccgcgg gaagggtttg tcaatgatgc gccgcaggtt gtacaggtgc gaacgcaagg
     1141 tgtccgaatc gggcagcatg tcgccccaga tttcacgctc gatgtcgcgc cggctgacca
     1201 cgcgcggcga ctcgcgcatc aggatcgcga gcagcttgag cccgatcggc gagacggtca
     1261 gctcgcggcc ggcacgggtc aggcgcagcg tcgcggtgtc cagcgtcatg tcgcccacgg
     1321 tgagcacttc ggtggatacc tggcggcggt cgcggcggat cagcgcgcgc aggcgcgctt
     1381 cgagctcgcg cacctcgaac ggcttcacca ggtagtcgtc ggcgccggcc tcgagaccgg
     1441 tcagcttgtc ctccagggtg tcgcgcgcgg tgagcatcag caccggggtc gacttcttcg
     1501 cgtcgtggcg cagcttgcgg cacacctcca gaccgtccag gccgggcagc atcaggtcga
     1561 gcacgatcac gtcgtagctg ctggccacgg ccaggtgcag gccgctcggg ccgtccgccg
     1621 cataatccac ggaatagcct cgggtttcga gaaactcgcc gaccgcttcc gcaatctgtc
     1681 ggttgtcttc gaccaacagg atcaatccgg cttgctcttc gcgtccgctc atgtgcgttt
     1741 cccatgttgg cttcacaaat gtgaagggag tcaagcggag gtttggtgag cccggcgtga
     1801 aaacgcgtca acgcagcaag ggctgcagca atggccacac gttgccgagc accttcggct
     1861 cgccggcggc ggtcggatgc aggccgtcgg gctgcatcag cgccgggtcg agcgccacgc
     1921 catcgagcag gaacggcagc agcgccacgt gcttctgccg cgccaggtcg gcgtagaccg
     1981 cgcgcaggcc gtcacgatac tgcgggccgt agttgagcgg cagctcgatg ccgagcagca
     2041 gcactttggc gtgggtggcc tgcgccgcgc tgaccatcgc cacgaggttg tcgcgcagct
     2101 gggccagcgg caggccgcgc aggccgtcgt tcgcccccag ctcgatcacc accacaccgg
     2161 ggcgatacgt cgccagcagg gccggcaggc ggttgcgccc ggacagcgag gtctcgccgc
     2221 tgatgctggc attgaccacg gcccatggcg gcaccatctt gcccagacgg acttccagca
     2281 gatgcaccca gccctgctcc gctgcaatgt tgtgcgcggc ggagagcgaa tcgcccagca
     2341 ccagtacggt cctgggtgcg gcggcgggcg acgcgccgct ccatccgatc aacagcagtg
     2401 ccagcagcca gaggaatcga cgcatgagcg aaccttccca acctctcctg gaggcccgcg
     2461 atgt
//
LOCUS       DASSVL010000032         2035 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1031739,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000032 DASSVL010000000
VERSION     DASSVL010000032.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2035)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2035)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2035
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1031739"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(7..669)
                     /locus_tag="VFM52_00525"
     CDS             complement(7..669)
                     /locus_tag="VFM52_00525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007509904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HET8763683.1"
                     /translation="MTRLLIADDHPLFRTALHQAALTALGPAAVIVEAADLAAAMQVL
                     AADPDIDLVLLDLHMPGSRGLSGLAALRGRFPAVAVVVVSAHDEPRVVRRALDYGASG
                     YITKSTGHDDIAAAIRTVLACGEWVPPHLVRRVAELAPDPRDSELAVRLAHLTEQQYR
                     VLELLGEGLLNKQIADRLSIQERTVKAHVTPIFEKLGVHNRTQAGILLRSLDLADPAK
                     SL"
     gene            773..>2035
                     /locus_tag="VFM52_00530"
     CDS             773..>2035
                     /locus_tag="VFM52_00530"
                     /inference="COORDINATES: protein motif:HMM:NF022073.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005615 - extracellular space [Evidence
                     IEA];
                     GO_function: GO:0047989 - hydroxybutyrate-dimer hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0019605 - butyrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxybutyrate oligomer hydrolase family
                     protein"
                     /protein_id="HET8763684.1"
                     /translation="MTPAVRLLLAACILATPVAGAASPGSGANAMTPSFVVGPVQVTE
                     HRHGDDLLSAGLGLDGLRGAASAYAVAVHPTPAELRRRAIQASWKGIADLGPLGGYGT
                     VYGGVPDVPGREYTAFARVPGAHWPHRVLLQAPDHFDRNARCLVVAASSGSRGVYGAI
                     ALAGAWGLPKGCAVAYTDKGTGAGYFDTADGTGVGLDGVRRAAGDELLEFAPDGVAAD
                     AGIGVKHAHSGDNPEADWGRHVLQAAQFGLALLDRAYPDAAPFTARNTRVIVTGLSNG
                     GGAALQAAGLDDTGLIAAVVALEPNVHVPGHGRALYDYVTEAALLMPCALADPHYATA
                     PLARVAGKLPPAFAARCAALRATGELPGATLAEQAAAARDRLHASGWRDEAIATAAST
                     TAFDAWRAVAAAYASAYLRRGVGAMPCGY"
BASE COUNT          255 a          715 c          764 g          301 t
ORIGIN      
        1 cgcgcgctac agcgacttgg cgggatcggc gagatccagc gagcgcagca ggatgccggc
       61 ctgcgtgcgg ttgtgcacgc cgagcttttc gaagatgggg gtgacgtgcg ccttgacggt
      121 gcgctcctgg atcgacagcc ggtccgcgat ctgcttgttc aacagccctt cgccgagcag
      181 ttccagtaca cggtattgct gctcggtgag gtgcgcgagc cggaccgcca gctcgctgtc
      241 gcgcgggtcg ggcgccagct ccgcaactcg ccgtaccagg tgcggtggca cccattcgcc
      301 gcacgccagc acggtgcgga tcgcggcggc gatgtcgtcg tggccggtac tcttggtgat
      361 gtagccggag gccccgtagt cgagcgcgcg gcggaccacg cgcggctcgt catgggcgga
      421 aaccaccacg accgccaccg cgggaaaccg gccgcgcagc gccgccagtc cggaaagacc
      481 gcggctgccc ggcatgtgca gatcgagcag caccagatcg atgtccgggt ccgccgccag
      541 cacctgcatc gcggcagcca ggtcggcggc ttccacgatc accgccgccg gcccgagtgc
      601 cgtgagcgcc gcctggtgca gggcggtgcg gaacaggggg tggtcgtcgg caatcagcag
      661 gcgcgtcatg gtcgggttcg cagtgatggc ttcgagccta gcgaggtggg tgcggaggcg
      721 catcggactt tcgtcctatg gccgccgctg agcggtgcgc tatcgtcggg gcatgacgcc
      781 cgctgtccgc ctgttgctcg ccgcctgcat cctggccacg ccggtggcgg gcgcggcctc
      841 gcccggttcg ggagcaaacg cgatgacacc ttccttcgtg gtcggtccgg tgcaggtcac
      901 cgagcaccgc catggcgacg acctgctgag tgcggggctc gggctcgatg gcttgcgcgg
      961 cgccgcctcg gcatacgcgg tggcggtgca cccgacgccg gccgagttgc gccggcgcgc
     1021 gatccaggcc agctggaaag gcattgcgga cctgggccca ctgggcggct acggcaccgt
     1081 ctacggcggc gtgccggacg tacccgggcg cgagtacacc gcgtttgcgc gtgttcccgg
     1141 cgcgcattgg ccgcaccgcg tgctgctgca ggcgccggat cacttcgatc gcaacgcgcg
     1201 ctgcctggtg gtggcggcct cgtccggctc gcgcggcgtg tacggcgcga tcgcactggc
     1261 cggcgcgtgg ggactgccca aaggctgcgc ggtcgcgtac accgacaagg gcaccggcgc
     1321 cggatatttc gacaccgccg acggcaccgg cgtcggcctc gacggcgtgc gtcgcgcggc
     1381 cggcgacgag ctgctggagt ttgcgccgga cggtgtggct gccgatgccg gcatcggcgt
     1441 gaagcacgcg cattccggcg acaatcccga agccgactgg ggccggcacg tgctgcaggc
     1501 ggcgcagttc ggcctggccc tgctcgaccg cgcctatccc gatgcggcgc cgttcaccgc
     1561 gcgcaatacg cgcgtcatcg tcaccgggct gtccaacggc ggcggcgcgg cgctgcaggc
     1621 ggccgggctg gacgacaccg gcctcattgc cgcggtggtg gcgctggagc ccaacgtgca
     1681 cgtgccgggc catggccgcg cgctgtacga ctacgtcacc gaggccgcgc tgctgatgcc
     1741 gtgcgcgctg gccgatccgc actacgcgac ggcgccattg gcgcgggtcg ccggcaagct
     1801 gccgccggcg ttcgcggcgc gttgtgcggc cttgcgtgcc accggcgagt tgccgggcgc
     1861 gacgctggcg gaacaggctg cggccgcgcg cgaccgcctg catgccagcg gttggcgcga
     1921 cgaggccatc gccaccgccg ccagcaccac ggcgttcgac gcgtggcgcg ccgtcgccgc
     1981 cgcgtatgcc tccgcctacc tgcggcgcgg cgtgggcgcg atgccgtgcg gttat
//
LOCUS       DASSVL010000033         2412 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_622050, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000033 DASSVL010000000
VERSION     DASSVL010000033.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2412)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2412)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2412
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_622050"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(154..591)
                     /locus_tag="VFM52_00535"
     CDS             complement(154..591)
                     /locus_tag="VFM52_00535"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0032559 - adenyl ribonucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HET8763685.1"
                     /translation="MFKHILVPIDDDAGSHRAIEQAVALARSIGARVTGVHAMMEFNP
                     VGIVEELIEPPPDQLRQLAEAHADKLLALLADEAGRAGVACDTIAVQGDRPWQVIVAK
                     AAELACDLIVMASHGRRGVAKLVLGSETQKVLTHAEIPVLVVR"
     gene            complement(984..1706)
                     /locus_tag="VFM52_00540"
     CDS             complement(984..1706)
                     /locus_tag="VFM52_00540"
                     /inference="COORDINATES: protein motif:HMM:NF012257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic nucleotide-binding domain-containing
                     protein"
                     /protein_id="HET8763686.1"
                     /translation="MDTSFAPLAVEATSPQPPRSDAPLELDIAQLQQYMVVTRRKVRA
                     GQYVYRNGQPFRALHFVHAGFLKTCELSEDGREQVTGFRMRGDLLGVESIGLSVHTCD
                     AVALDDAEIWELPFPPVLDALQHIPELQVRLAAALAEEIRRDRVWMLVIGTLPAEQRV
                     AAFLLDIAARLARLGFSARHFILRMGRADIASFLALKHETVSRALSHLEQLQYISVLR
                     REIKLLDIPKLRASVGTSFTIQ"
     gene            complement(1882..>2412)
                     /locus_tag="VFM52_00545"
     CDS             complement(1882..>2412)
                     /locus_tag="VFM52_00545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015447935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoketolase"
                     /protein_id="HET8763687.1"
                     /translation="DVVMACAGDVPTLETLAAVTILRHHLPELKLRVVNVVDLMRLES
                     PSLHPHGLGDGDFDRLFTTDRPVVFAYHGYPALIHRLTYRRRNHDNLHVHGYREEGAI
                     TTPFDMTVLNRLDRFHLVMDVIERLPALASRTIYLKQQLQDKLVEHRRYICEHGMDLP
                     EVREWAWGSPTAGALR"
BASE COUNT          382 a          837 c          823 g          370 t
ORIGIN      
        1 gattgcgatg atcggcggca ggccggccac cagcggcagc aaggtggcgg catacaacgc
       61 gacgatgtac ggccacagcg gcgaagcatg gaacgaggca aattcgatca cgatggttcg
      121 ctccgcatca tgggcggcgg cgccagccgt cgctcagcgc accaccagca ctgggatctc
      181 ggcgtgcgtc aggactttct gggtctcgct gccgagcacg agcttcgcga cgccgcgcct
      241 gccgtgcgag gccatcacga tcaggtcgca ggccagctcc gcggctttcg cgacgatcac
      301 ctgccacggc cgatcgcctt gcaccgcgat cgtgtcgcac gccaccccgg cgcgcccggc
      361 ctcgtccgcg agcaaggcga gcagcttgtc ggcatgggcc tcggccaact gccgcaattg
      421 atcagggggc ggctcgatca gctcctcgac gatgccgacg ggattgaatt ccatcatcgc
      481 gtgcacgccg gtgacgcgtg cgccgatgct gcgcgccaac gcgacggcct gctcgatggc
      541 gcggtgcgaa cccgcgtcgt cgtcgatggg gaccaggatg tgcttgaaca tgtcggtcgg
      601 atccctggtc cgcgctccgt ccctggatcg cggaccttgc tcggtcaggg gacgcttcca
      661 tcctgtagcg tcgtctgctc ccgcgcctcg ggacatcccg cccccggcac tctcctcgcc
      721 gccacgcctg tcgacctcga cgagcccccg ctgtgaggtc gcgctgcagg gcctgtgcgc
      781 atgcgccagg cggcatgctt gccaggcatg gggttcgccc cgaccggcgg ctgccactat
      841 tccgcgccgt cgcggcggcc cgttgatgca catcaactcc aggccggaaa gccccgcctc
      901 cccgaccgcg gggacaccga ctgcggccag ggaccgcgac cctgcgcagg ccaggccgcc
      961 ggggccgcag gccggaaaac cgttcactgg atcgtgaagg aggtgccgac actggcgcgc
     1021 agcttgggga tatccagcaa ctttatttcg cggcgcagca ccgagatgta ctgcagctgc
     1081 tccaggtgcg acagcgcccg gctcacggtc tcgtgcttga gcgcgaggaa gctcgcgatg
     1141 tcggcccgcc ccatgcgcag gatgaagtgg cgggcgctga agccgagacg cgcaaggcgt
     1201 gcggcgatgt cgagcaggaa cgccgccacg cgctgttcgg cgggcagggt cccgatcacc
     1261 agcatccaca cgcggtcgcg ccggatttcc tcggccagcg ccgccgccag ccggacctgc
     1321 agctcgggga tgtgctgcag cgcatccagg acgggcggga acggcagttc ccagatctcg
     1381 gcgtcgtcca gcgcgacggc atcgcaggtg tgcacgctga ggccgatgga ctcgacgccg
     1441 agcaggtcgc cgcgcatgcg gaatccggtc acctgctcgc ggccgtcctc cgacagctcg
     1501 caggtcttca ggaaccccgc gtggacgaaa tgcagggcgc ggaacggctg gccgttgcgg
     1561 tacacgtact ggcccgccct caccttccgg cgcgtcacga ccatgtactg ctgcaactgc
     1621 gcgatatcca gctcgagcgg cgcatcactc cggggcggct gcgggctcgt ggcttcgaca
     1681 gcgaggggtg cgaacgaggt gtccatgccg tactcccgat ggtggttgcg ttgaccacca
     1741 aggctagggc gcgactgcaa ccgcacgatg tccgccgggc aacgctctgt aacaatgcgt
     1801 aacggcgccg ccgccaagca gcggatcggg cacatcaagc cgcccgcgcg acggggccgc
     1861 cggcggcgcg aaagcttgtg ctcaacgcaa cgcgcccgcc gtgggggagc cccatgccca
     1921 ctcgcgcact tccggcaggt ccatgccgtg ctcgcagatg tagcggcgat gctcgaccag
     1981 cttgtcctgc agctgctgct tgaggtagat ggtccgcgag gcgagcgccg gcaggcgctc
     2041 gatcacgtcc atcaccaggt gaaagcggtc cagcctgttc agcaccgtca tgtcgaacgg
     2101 cgtggtgatc gccccctctt ccctgtagcc gtgcacgtgc aggttgtcgt ggttgcgccg
     2161 ccggtaggtc agccgatgga tcagcgccgg atagccgtgg taggcgaaga ccaccgggcg
     2221 gtcggtggtg aacagccggt cgaagtcgcc gtcaccgagg ccgtgcgggt gcaggctcgg
     2281 cgactccagc ctcatcagat ccacgacgtt gacgacccgg agtttcagct ccggaagatg
     2341 gtggcggagg atggtgaccg cggccagcgt ttccagggtc ggcacgtcgc ccgcgcaggc
     2401 catcaccacg tc
//
LOCUS       DASSVL010000034         2053 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1398952,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000034 DASSVL010000000
VERSION     DASSVL010000034.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2053)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2053)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2053
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1398952"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(219..1106)
                     /locus_tag="VFM52_00550"
     CDS             complement(219..1106)
                     /locus_tag="VFM52_00550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007808118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NRDE family protein"
                     /protein_id="HET8763688.1"
                     /translation="MVLDHQHRHVCQLGSHAAPFLYGSFEWSLAPGRVVGVRCGRLAR
                     MCVIAFAWNAHPRWRLLLVGNRDEAHARPSAPLQRWADAPGLIAGRDLEAGGTWMGVR
                     EPGRACVVTNVRDPRAARDRASRGWLVTDFLQGGDLAARHAGALEAVATRYRPFNLLL
                     FDEEAARFVSNDPGVCTRTITAGIHGLSNGDLDAPWPKVRRVTAVLQDWLASGVEGFA
                     PLFEAFIDETPAPDAALPDTGVGIELERKLSPVFVRGESYGTRATTIIALDREGGGII
                     EEHRFGPDGVAQGKTQLRF"
     gene            1059..>2053
                     /locus_tag="VFM52_00555"
     CDS             1059..>2053
                     /locus_tag="VFM52_00555"
                     /EC_number="3.1.4.52"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0071111 - cyclic-guanylate-specific
                     phosphodiesterase activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing response regulator"
                     /protein_id="HET8763689.1"
                     /translation="MRAKLAHMSVLVVEDHDFQRQVALRLLQHMGIGTALEAADGRSA
                     LAVLGQQKQPVDVVLVDLDLPHMDGIEFIGHVAQERLANAVVVLTALDPALLNTVRIM
                     ARASGIRVLGTVEKPLTEAKLGGVMDLYFTADLLADETPQLDIDEGLLAEALASDAFE
                     AWFQPQVAIGSGFVTGVGALARWSLGGHSVPPARFIPELERCNLIDALTERILNQACR
                     WRARWREAGLDLGISVNVSMHNLEDTAAADRYQAIVQAGGVDTRDVTLEITESAMMHE
                     AAPVLNVLARLRLKGFGLSVDDFGTGWSSLSQLAQLPVTELKIDQGFINGATTEPR"
BASE COUNT          349 a          726 c          676 g          302 t
ORIGIN      
        1 ggccagaaat tgatgatccg catcggcccg gagcacgaac gcacgttgaa ggccaagctg
       61 cgcagcatcc gtgcgttgct gcagggccag gccccggtgt tccatgcggc ggcggaagcg
      121 cagccggcga cagcttcgtc aacgcactga cgggttgcac tcgcgggcgt accctcaccc
      181 gccctccgcg caccccttcc cggagggaga ggcgaagatc aaaagcgcag ctgggtcttc
      241 ccctgcgcca cgccgtccgg cccgaagcga tgctcctcga tgatgccgcc gccctcgcgg
      301 tccagcgcga tgatcgtcgt ggcacgcgtg ccatagcttt cgccgcgcac gaacaccggg
      361 gacaatttgc gctccagctc gatgccgacg ccggtatcgg gtagcgccgc gtcgggtgcg
      421 ggcgtttcgt cgatgaatgc ctcgaacagc ggcgcgaagc cttccacgcc cgatgcgagc
      481 caatcctgca acaccgcagt cacgcgccgg actttcggcc acggcgcatc caggtcgccg
      541 ttcgacaagc cgtggatgcc ggccgtgatc gtgcgcgtgc aaacaccggg atcgttcgac
      601 acgaagcgtg cagcttcttc gtcgaacagc agcaggttga aggggcggta acgcgtggcg
      661 acggcctcca gcgcgccggc gtgacgcgct gccaaatcgc cgccttgcag gaagtccgtc
      721 accagccagc cgcgcgatgc gcgatccctg gcggcgcgcg gatcgcgcac attggtcacc
      781 acgcaggcgc gcccgggctc gcgcacgccc atccaggtgc cgcccgcttc caagtcgcgc
      841 ccggcgatga gacccggcgc atcggcccag cgctgcagcg gcgccgacgg ccgcgcgtgc
      901 gcctcgtcgc gattgccgac cagcagcagg cgccagcgcg ggtgggcgtt ccaggcaaag
      961 gcgatcacgc acatccgggc aagcctaccg catcggaccc ccaccacgcg gcccggtgct
     1021 agactccatt cgaaactgcc gtacaggaag ggggcggcat gagagccaag ctggcacaca
     1081 tgtcggtgct ggtggtcgag gaccatgatt tccagcgcca ggtggcgctg cggctgctgc
     1141 agcacatggg catcggcact gcactggaag cggcggacgg gcgcagcgcg ctcgccgtgc
     1201 tggggcaaca aaagcagccg gtggatgtcg tgctggtcga cctcgacctg ccgcacatgg
     1261 acggcatcga gttcatcggc cacgtcgcgc aggaacggct cgccaatgcg gtggtggtgc
     1321 tgaccgcgct cgatcccgcg ctactcaata ccgtgcgcat catggcgcgt gcttccggca
     1381 tccgcgtgct gggcacggtc gaaaaaccgc tgaccgaagc caagctcggc ggcgtgatgg
     1441 atctgtattt caccgccgac ctgctggccg acgaaacccc gcagctggac atcgacgaag
     1501 gcctgcttgc ggaagcgctg gcgagcgacg ccttcgaagc gtggttccag ccgcaggtag
     1561 cgatcggcag cggtttcgtc accggcgtcg gggcgctggc gcgctggagc ctcggcggcc
     1621 actcggttcc acccgcgcgc ttcatcccgg aactcgaacg ctgcaacctg atcgacgccc
     1681 tcaccgaacg catcctcaac caggcgtgcc gctggcgcgc gcgctggcgc gaagccgggc
     1741 ttgacctcgg catttccgtc aacgtgtcga tgcacaacct cgaggacacc gccgccgccg
     1801 accgctacca ggccatcgtg caggcgggag gcgtcgacac ccgcgacgtg acgctcgaaa
     1861 tcaccgagtc ggccatgatg catgaagccg cgccggtcct gaacgtgctg gcgcgcctgc
     1921 gcctcaaggg cttcggcctg tcggtggacg acttcggaac gggctggtcg tcgctttcgc
     1981 agctcgcgca acttcccgtc accgaactca agatcgacca gggcttcatc aacggcgcca
     2041 ccaccgaacc gcg
//
LOCUS       DASSVL010000035         3472 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1286099,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000035 DASSVL010000000
VERSION     DASSVL010000035.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3472)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3472)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3472
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1286099"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1268
                     /locus_tag="VFM52_00560"
     CDS             <1..1268
                     /locus_tag="VFM52_00560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008436564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="dicarboxylate/amino acid:cation symporter"
                     /protein_id="HET8763690.1"
                     /translation="GVVAAVATLGFGQFHPATLQAMQAISTAVLDPFGQVFLRMLFFV
                     VIPLVFTSLASGVAQLGRLDRLGPLAGRTFFLFFLNMGIAVAIGLVMMNTVEPGHHLG
                     EAARTQLMAEYGGVADQAIAKEAKQPGMSLAVLVEMFMPRNLFGAVTGASRDALGDVL
                     PLILFAILVGAAATQLREKERKRVQQALDTVTDLMTKIVGFALELAPFAVPAMIYSVI
                     VKVGVDVLLALSVFVVGCTAALALHLFGTMSLWVRYLAGRSPGTYFRQIRSLLIAAFS
                     TSSSSACLPAALAVAHDELKLAPSTAGFVLPLGATMNMSGTALFEGCVVLFVAQAFGV
                     ELSLAHQAILMLLSVLSAVAVAGIPGGSLPMIAGLLATFGVPPEGLGIIIGVDRILDM
                     MRTTVNVGSDIVTATVVDRQLRERFAGTP"
     gene            1383..1946
                     /gene="ahpC"
                     /locus_tag="VFM52_00565"
     CDS             1383..1946
                     /gene="ahpC"
                     /locus_tag="VFM52_00565"
                     /EC_number="1.11.1.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003858764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0102039 - NADH-dependent peroxiredoxin
                     activity [Evidence IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alkyl hydroperoxide reductase subunit C"
                     /protein_id="HET8763691.1"
                     /translation="MSLINTEVKPFKAQAFKAGKFIEVTEADLKGKWSVVFFYPADFT
                     FVCPTELEDLAEHYAEFQKLGVEIYSVSTDTHFSHKAWHDTSDAVSKIQYTMVGDPTH
                     AICRNFDVLIEDAGLADRGTFVIDPQGKIQIVEVHAGSIGRDANELLRKVKAAQYVAA
                     HPNEVCPAKWHEGEKTLAPSLDLVGKI"
     gene            2067..3472
                     /gene="ahpF"
                     /locus_tag="VFM52_00570"
                     /pseudo
     CDS             2067..3472
                     /gene="ahpF"
                     /locus_tag="VFM52_00570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012439153.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0016668 - oxidoreductase activity, acting
                     on a sulfur group of donors, NAD(P) as acceptor [Evidence
                     IEA];
                     GO_process: GO:0006805 - xenobiotic metabolic process
                     [Evidence IEA];
                     GO_process: GO:0009398 - FMN biosynthetic process
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="alkyl hydroperoxide reductase subunit F"
BASE COUNT          585 a         1162 c         1158 g          567 t
ORIGIN      
        1 tcggcgtggt agccgcggtg gccacgctgg gtttcgggca gttccatccg gccacgctgc
       61 aggccatgca agcgatttcc acggcagtgc tcgatccgtt cgggcaggtc ttcctgcgca
      121 tgctgttctt cgtggtgatc ccgctggtgt tcacctcgct cgcgtccggc gtcgcgcaac
      181 tcggccggct tgatcgcctg ggcccgctgg ccgggcgcac gtttttcctg ttcttcctca
      241 atatgggcat cgcggtggcg atcggactgg tgatgatgaa caccgtcgag cccggccacc
      301 atctcggcga ggcggcgcgc acccagctga tggccgaata cggcggcgtt gccgaccagg
      361 cgatcgcgaa ggaagccaag cagcccggca tgagcctcgc cgtgctggtc gagatgttca
      421 tgccgcgcaa cctgttcggt gcggtgaccg gtgccagccg cgacgcgctc ggcgacgtgc
      481 tgccgctgat cctgttcgcg atcctggtcg gcgcggcggc aacgcagctg cgcgagaagg
      541 aacgcaagcg cgtacagcag gcactggaca cggtcactga cctgatgacg aagatcgtcg
      601 gcttcgcgct ggagctcgcg ccgttcgccg tgccggcgat gatctacagc gtgatcgtga
      661 aggtgggcgt ggacgtgctg ctcgcgctgt cggtgttcgt cgtcggctgc accgccgcgc
      721 tcgcgctgca cctgttcggc accatgtcgc tgtgggtgcg ctatctcgcc gggcgttcgc
      781 cagggacgta tttccgccag atccgttcgc tgctgattgc ggcgttttcc accagctcca
      841 gtagcgcctg cctgcctgcg gcgctggccg tggcgcatga cgaattgaaa ctggcgccga
      901 gcacggccgg cttcgtgctg ccgctgggcg cgacgatgaa catgagcggc accgcgctgt
      961 tcgagggctg cgtggtgctg ttcgtggcgc aggccttcgg cgtcgaactg agcctggccc
     1021 accaggcgat cctgatgctg ctatcggtgc tgagcgcggt ggccgtggct ggcatcccgg
     1081 gcggttcgct gccgatgatc gcgggcctgc tggccacctt tggcgtgccg ccggaagggc
     1141 tcggcatcat catcggcgtg gaccgcatcc tcgacatgat gcgcaccacg gtcaacgtcg
     1201 gcagcgacat cgtcaccgcc acggtggtcg accgccagct gcgcgaacgt tttgccggca
     1261 cgccgtgagg cctacatcac catagctgcc acgtatcagc gtgatgccga caatcaattg
     1321 gattgattga ccgcggctcc ctaccatgtg cgtcacgagt caaccaacca agggagcaac
     1381 tgatgtcgct gatcaacacc gaagtgaagc cgttcaaggc gcaggcattc aaggccggca
     1441 agttcatcga agtcaccgag gccgacctca agggcaagtg gtccgtggtg ttcttctacc
     1501 ccgccgactt caccttcgtc tgcccgaccg aactggaaga cctcgccgag cactacgccg
     1561 agttccagaa gctgggcgtg gaaatctaca gcgtgtccac cgacacccat ttctcgcaca
     1621 aggcctggca cgacacctcc gacgcggtgt cgaagatcca gtacacgatg gtcggtgacc
     1681 cgacccacgc gatctgccgc aacttcgacg tgctgatcga ggacgccggc ctggccgacc
     1741 gcggcacctt cgtgatcgac ccgcagggca agatccagat cgtcgaggtg cacgccggca
     1801 gcatcggccg cgatgcgaac gagctgctgc gcaaggtcaa ggctgcgcag tacgtcgccg
     1861 cgcacccgaa cgaggtgtgc ccggcgaagt ggcacgaggg cgaaaagacc ctggcgccgt
     1921 cgctcgacct ggtcggcaag atctgattgg ttccacggcg gaactggccc cgggtgcatg
     1981 cacccggggc caccgggacc cttgtgcgag cggccggcac cggccgttcg cacaagcatc
     2041 ccgcccactt tgcaaggagt gacctcatgc ttgacgcaac catcaagacc cagctggcgg
     2101 cctacctcga aaaactcacc ctgccgattg agctggtcgc cgcgctcgac gccagcgaca
     2161 aatcgcgcga actcgaggcg ctgctcaccg aaatcgccgc gatgagcgac aggatcagcc
     2221 tgcgccgcga cgataccgat gcgcgcaagc catcattcgc gatccgccgc accggcaccg
     2281 atatccaggt gcgctttgcc ggcatcccgc tcggccacga gttcacctcg ctggtgctgg
     2341 cgctgctgca ggtcggcggg tatccgccga aggaagccgc ggaaaccatc gcccaggtgc
     2401 aggcgctgga aggccggttc cgcttcgaga cgttcttctc gctgtcctgc cagaactgcc
     2461 cggacgtggt gcaggcgctg aacctgatga gcgtgccgaa cccgaacatc gagcacgtgg
     2521 cgatcgacgg cgcgctgttc caggacgagg tcgccgcgcg ccagatcatg tcggtgccca
     2581 ccgtgtactt gaacggcgaa ctgttcgacc agggccgcat gagcctcgaa cagatcgtcg
     2641 ccaagctcga caccggcgcc gctgagcgcg ccgccgcggc gatcaagggc aaggcgccgt
     2701 tcgacgtgct ggtggtcggc gccgggccgg ccggcgggct gcagcgatct atgcagcgcg
     2761 caagggcatc cgcaccggca tcgccgccga gcgtttcggc ggccaggtgc aggacaccat
     2821 ggcgatcgag aacttcatct cggtgccgta caccgaaggc ccgaagttcg gcgccgcact
     2881 ggaacgccac gtgcgcgagt acgaggtgga cgtgatgaac ctgcagcgcg cggcgaagct
     2941 ggtgcccgcc gcggagtcgg ccagcggcct caacgagatc gagctcgaga acggcgcccg
     3001 cctcaaggcg aagaccgtgg tgctcgccac cggcgcgcgc tggcggcaca tcggcgtgcc
     3061 cggcgaggag gcctaccgca accgtggcgt ggcgtactgc ccgcattgcg acggcccgct
     3121 gttcaagggc aagcgcgtgg cggtggtcgg cggcggcaac tccggcgtgg aggctgcgat
     3181 cgacctcgcc ggcctggtcg accatgtgac gctgatcgaa tacgaccacc agctgcgcgc
     3241 ggacgaggtg ctgcaacgca agctgcgcag cctggccaac gtggacgtcg tcaccagcgc
     3301 gcagaccacc gaggtgctcg gcgccgacga caaggtcaac ggcctggtct acaaggaccg
     3361 caccgacggc gtgatgcaca gcgtgtcgct cgaaggcgtg ttcgtgcaga tcggcctgct
     3421 gcccaacacc gagtggctca agggcacgct ggaactcacg ccgcgcggcg ag
//
LOCUS       DASSVL010000036         2486 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_692790, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000036 DASSVL010000000
VERSION     DASSVL010000036.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2486)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2486)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2486
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_692790"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..214)
                     /locus_tag="VFM52_00575"
     CDS             complement(<1..214)
                     /locus_tag="VFM52_00575"
                     /inference="COORDINATES: protein motif:HMM:NF012309.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006801 - superoxide metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase family protein"
                     /protein_id="HET8763692.1"
                     /translation="MASPAPAGSSARAHAVLASASNSDVAGTLSFASTDQGVRITGRI
                     TGLKPDSTHGFHIHEHGNCSTPDASSA"
     gene            complement(443..2242)
                     /locus_tag="VFM52_00580"
     CDS             complement(443..2242)
                     /locus_tag="VFM52_00580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016944784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SLC13 family permease"
                     /protein_id="HET8763693.1"
                     /translation="MEFQQIVFLVILAAALVLLITEWVRIDLTGVLIVVALAGTSLLK
                     PAEALSGFSSDPAILVASMFVLSAGLAQTGVTGLLGAWIGRMAGNSIWRAVLVIMPCV
                     ALMAAFSHHLMITAMMLPVILELNRSHDLPASRLMMPMAFAASLGTTVTVIAAPAFLV
                     ARDLLERGGAHDIGIFSIAPMGVVLTLIGTAYMLFFGRWLLPSHEGGGGGEDRFRLER
                     YYTELVVLEASPHVGKSMRDFGKEHAERFRVVDWLRHGSSRRRPWRRKLLAAGDLLLV
                     RASPDELAALKEQRGLALSAVVQYGEEIEDNRRADREEDERLVQAVVGPDSGLVGRTI
                     GDVDFLRRYGVVVVGLWRKRGFIRKELSKVKLEGGDLMVLWGDKRALDRLARNPSFLL
                     LVPFSGRAQVRDRGWLAALIMALSVAGAASGLMPVAVSFLAGATAMVVTRCLTLKQAY
                     ESVELRIFVFIAGAIPLGLAMEQTGTAALFADWLSTLVSGWSPTWVLLALFLTAALFT
                     QILSDTATTILLGPVALGMASLLDMSAFAMVFSVAMGAVVAFLTPIGHHGNLLVYEPG
                     HYRFVDFVRVGTPLTVLLGIAVAWLAPLLWPAG"
BASE COUNT          451 a          834 c          848 g          353 t
ORIGIN      
        1 cggcgctgct ggcatccggc gtgctgcagt tgccgtgttc gtggatgtgg aaaccatggg
       61 tgctgtcggg tttgagcccg gtgatgcggc cggtgatgcg gacgccctgg tcggtgctgg
      121 cgaacgaaag cgtgccggca acatcgctgt tgctggccga cgcgagcacg gcgtgcgcgc
      181 gggccgacga acccgccggt gcgggggatg ccatgggaga cgacgccgga gatgccgcag
      241 tcgtgggcga tgcggcgggc gatgccggtg cttgctgatg gtcgttggag catcccgcca
      301 gcaaggcgac ggatgcgaat gcgagcaacg cagtgattcg tgtcatggga tcatcctttc
      361 gagtcaggat cgtccgaggt taatggcccc gtccggacgc gccgtcaata ttccgttagg
      421 aagcccaact ggccatggtg tttcacccgg caggccacag cagcggcgcc agccatgcca
      481 cggcgatgcc cagcaacacg gtcagcggcg tacccacgcg cacgaaatcg acgaagcggt
      541 agtggcccgg ctcgtacacc agcaggttgc cgtggtggcc gatcggggtc aggaacgcca
      601 ccaccgcacc catcgccacg ctgaacacca tggcgaaggc cgacatgtcg agcaggctgg
      661 ccatgcccag cgcgaccggg ccgagcagga tggtggtcgc ggtatcggac aggatctggg
      721 tgaagagcgc ggccgtcagg aacagcgcca gcagcaccca ggtcggtgac cacccggaca
      781 cgagcgtcga gagccagtcc gcgaacaagg ctgcggtgcc ggtctgttcc atcgcaagtc
      841 ccagcggaat cgcgccggcg atgaacacga agatgcgcaa ctccaccgat tcgtaggcct
      901 gcttcaaggt caggcagcgg gtgacgacca tcgccgtggc gcccgcgagg aacgaaacgg
      961 cgaccggcat caggcccgat gcggcgcccg ccacgctgag cgccatgatc agggccgcca
     1021 gccagccgcg gtcgcgtacc tgggcgcggc ccgagaacgg caccagcagc aggaaggacg
     1081 gattgcgggc gagccgatcc agcgcgcgct tgtcgcccca cagcaccatc aagtcgccgc
     1141 cctcgagctt caccttggac agttccttgc ggatgaagcc gcgcttgcgc cacagcccca
     1201 ccaccaccac gccatagcga cgcaggaagt cgacatcgcc gatggtgcgt ccgaccagcc
     1261 cggaatcggg cccgaccacg gcctgcacca ggcgttcgtc ctcctcgcgg tcggcgcggc
     1321 ggttgtcctc gatttcttcg ccgtactgca ccaccgcgct gagcgcgagt ccgcgctgtt
     1381 ccttcagcgc cgccagttcg tccgggctgg cgcgcaccag cagcaggtcg cccgcagcca
     1441 gcagcttgcg tcgccagggt cgccggcgcg agctgccgtg ccgcagccaa tccactaccc
     1501 ggaatcgctc ggcgtgttcc ttgccgaagt cgcgcatcga tttgccgacg tgcggcgaag
     1561 cctcgagcac caccagttcg gtgtaatagc gttccaggcg gaaacgatcc tcgccgccgc
     1621 cgccgccctc gtggctgggc agcagccagc gtccgaaaaa caacatgtac gcggtgccga
     1681 tcagggtcag cacgacgccc atcggtgcga tcgagaagat gccgatgtcg tgcgcgccgc
     1741 cgcgctcgag caggtcgcgc gcgaccagga aagccggtgc cgcgatcacc gtcacggtgg
     1801 tgcccagcga agcggcgaac gccatcggca tcatcagccg ggaggccggc aggtcgtgcg
     1861 agcggttgag ctccaggatc accggcagca tcatcgccgt gatcatcagg tggtggctga
     1921 aggcggccat caacgccacg cagggcatga tcaccagcac cgcgcgccag atgctgttgc
     1981 ctgccatgcg cccgatccat gcgcccagca ggccggtcac cccggtctgc gcgagccccg
     2041 ccgacagcac gaacatcgat gcgacgagta tggccgggtc gctggaaaag cccgacagcg
     2101 cttcggcggg tttgaggagg ctggtgccgg ccagcgccac cacgatgagc acgccggtaa
     2161 ggtcgatgcg cacccattcg gtgatcagca ggaccagcgc tgccgcgagg atcaccagaa
     2221 acacgatctg ctggaattcc atgccggggg attcgtcgtg gccgttcgtc cgatggtagc
     2281 ggtggccggc ggcagggtcc gaaagccgaa ggcgccgaat gacgcggtta cgcggacgcg
     2341 atgatccagc cgaaccgcgc gccatcggat cgcaccaggg cttcccgggt gaaccccgtg
     2401 ccccagatcc gttcggcgga tgccgtgagc gcctctgcgg aagagatgtc caaagcggcg
     2461 cgacacatcg ccgacaagcg ggcatg
//
LOCUS       DASSVL010000037         2738 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1356678,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000037 DASSVL010000000
VERSION     DASSVL010000037.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2738)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2738)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2738
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1356678"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(97..2115)
                     /gene="uvrB"
                     /locus_tag="VFM52_00585"
     CDS             complement(97..2115)
                     /gene="uvrB"
                     /locus_tag="VFM52_00585"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015448335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009380 - excinuclease repair complex
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrB"
                     /protein_id="HET8763694.1"
                     /translation="MTDRFQLVAPYQPAGDQPEAIQQLATGFEAGLAAQTLLGVTGSG
                     KTFTVASVIERVQRPTIVLAPNKTLAGQLYGEFKSFFPHNAVEYFVSYYDYYQPEAYV
                     VASDTYIEKDSSINEHIEQMRLAATKALLSRPDAVIVASVSAIYGLGNPEDYLSLRLI
                     LARGEHMDQRKLIHQLTELQYTRNDMELRRGTYRAHGEVIDVFPAESETEALRIELFD
                     GDVENLSLFDPLTGETIRRVPRYVVYPRTHYASTRQSVLNAIETIKVELSQRLEQLYK
                     ENRLLEAQRLEQRTRFDLEMMAEVGYCQGIENYSRHLTRRAPGEPPPTLFDYLPADGL
                     LVIDESHVTVPQLGAMYKGDRSRKETLVEFGFRLPSALDNRPLRFEEWEARVPRTIFV
                     SATPRDYELKKSGKAVAELVVRPTGLLDPEVEVRPVRTQVDDLLSEAHKRVAMGDRVL
                     VTTLTKRMAENLTEYLGEHGVKVRYLHSDIDTVERAEIIRDLRLGEFDVLVGINLLRE
                     GLDMPEVSLVAILDADKEGFLRSTGSLIQTIGRAARNVRGKAILYADEVTPSMQAAMD
                     ETARRREKQLVFNTEHGITPKTVQRRIADIMEGARSDAPARGRGTRTRQHVVAEEAAD
                     YATMDPVKASATIRKLEAQMYKHAQNLEFEQAARLRDQIHELREHVLR"
     gene            2268..>2738
                     /locus_tag="VFM52_00590"
     CDS             2268..>2738
                     /locus_tag="VFM52_00590"
                     /inference="COORDINATES: protein motif:HMM:NF023444.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015627 - type II protein secretion
                     system complex [Evidence IEA];
                     GO_process: GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GspH/FimT family pseudopilin"
                     /protein_id="HET8763695.1"
                     /translation="MPRASSRRRQAGVTLIEQILAVAIVGVLAAIAMPALGSLLRRTQ
                     VQAAQLDFIAALQHARGLAVTTGRPAQFCPSGDGLHCAATSRWDVGWLIGHPARGNGE
                     PDPAPTRVQASYAGIAILGDAGRKLTRFRPDGTASGSTNTWIFCHKGRTEQALVV"
BASE COUNT          410 a          960 c          900 g          468 t
ORIGIN      
        1 ctctaccgct gagctaaccg cccgtctcgc gagccggaag gcagcgcgag ccgcgcagta
       61 taggggagcc cctggccggc gacaagcgcg ccggcgtcag cgcaagacgt gctcgcgcag
      121 ctcgtggatc tggtcgcgca ggcgcgcggc ctgctcgaac tcgaggttct gcgcgtgctt
      181 gtacatctgc gcctcgagct tgcggatggt agcggacgcc ttgaccgggt ccatcgtcgc
      241 gtaatcggca gcctcctcgg ccaccacgtg ctgcctggtc ctggtaccgc gcccgcgggc
      301 aggcgcatcg ctgcgcgcgc cttccatgat gtcggcgatg cgccgctgca cggtcttcgg
      361 ggtgatgccg tgctcggtgt tgaacaccag ctgcttctcg cgccggcgcg cggtctcgtc
      421 cattgccgcc tgcatcgacg gcgtgacctc gtccgcgtac aggatcgcct tgccacgcac
      481 gttgcgcgcc gcgcggccga tggtctggat cagcgagccg gtggaacgca ggaagccttc
      541 cttgtcggcg tcgaggatcg ccaccagcga cacctcgggc atgtccagcc cctcgcgcag
      601 caggttgatg ccgaccagca cgtcgaactc gccgaggcgc aggtcgcgga tgatctccgc
      661 gcgttccacg gtgtcgatgt ccgagtgcag gtaacgcacc ttcacaccat gctcgccgag
      721 gtattcggtg aggttttcgg ccatgcgctt ggtcagcgtg gtgaccagca cgcggtcgcc
      781 catcgccacg cgcttgtgcg cctcgctcaa aaggtcatcg acctgggtgc gcaccgggcg
      841 cacctcgacc tcggggtcga gcaggccggt cgggcgcacc accagctcgg ccaccgcctt
      901 gccggatttc ttcagctcgt agtcgcgcgg cgtggcggag acgaagatcg tgcgtggcac
      961 gcgcgcctcc cattcctcga agcgcaacgg ccggttgtcc agcgccgacg gcaggcggaa
     1021 accgaactcc accagcgtct ccttgcgcga gcggtcgccc ttgtacatcg cgccgagctg
     1081 cggcacggtg acgtgcgact cgtcgatcac cagcaggccg tcggccggca ggtagtcgaa
     1141 cagcgtcggc ggcggctcgc cgggcgcgcg ccgggtgagg tggcgcgagt agttctcgat
     1201 gccctggcag tagccgacct cggccatcat ttccaggtcg aagcgcgtgc gctgttcgag
     1261 ccgctgcgcc tccagcagcc ggttttcctt gtagagctgt tcgagccgct gcgacagctc
     1321 gaccttgatc gtctcgatcg cgttcagcac gctctgccgg gtcgacgcgt agtgggtgcg
     1381 cggatagacg acatagcgcg gcacgcgccg gatcgtctcg ccggtgagcg gatcgaacag
     1441 cgagaggttt tccacgtcgc cgtcgaacag ctcgatgcgc agcgcctcgg tttccgactc
     1501 cgcgggaaac acgtcgatca cctcgccgtg cgcgcggtag gtgccacggc gcagctccat
     1561 gtcgttgcgc gtgtactgca gctcggtcag ctggtggatc agcttgcgct ggtccatgtg
     1621 ctcgccgcgc gcgaggatca aacgcaggct gaggtaatcc tccgggttgc caaggccata
     1681 gattgccgac accgacgcca cgatcaccgc gtccggccgc gacagcagcg ccttggtcgc
     1741 cgccagccgc atctgctcga tgtgctcgtt gatcgaggaa tccttctcga tgtaggtgtc
     1801 ggacgccacc acgtaggctt ccggctggta gtagtcgtag tagctgacga agtactcgac
     1861 ggcgttgtgc gggaagaagc tcttgaactc gccgtacagc tgcccggcca gggtcttgtt
     1921 cggcgccagc acgatcgtcg gccgctgcac gcgctcgatg acgctggcga cggtgaaggt
     1981 cttgccggag ccggtcacgc cgagcagcgt ctgcgcggcc agcccggcct cgaaaccggt
     2041 ggcaagctgc tggatggcct ccggctggtc gccggcaggc tgataaggcg caacgagctg
     2101 gaaacgatcg gtcatggcgc acgatatgcg ggcaacgacc tgcatcttaa atcgttcgcg
     2161 cccacgaccc gttccgcccc accccgacat gcctgcccgc acgccggcca ctggcttgcc
     2221 gtcgcgcact tcctagcatg gctttcccac cgcgccgcga gcgtgccatg ccacgcgcat
     2281 cgtcccgtcg ccggcaagcc ggcgtcacgc tgatcgaaca gatcctggca gtcgccattg
     2341 tcggcgtgct ggcagccatc gccatgccgg ccctgggctc gctgctgcga cgcacccagg
     2401 tgcaggcggc acaactggat ttcatcgccg ccctgcagca tgcacgcggc ctcgccgtca
     2461 ctaccggccg ccccgcccag ttctgcccca gcggagatgg cttgcactgc gcggccacgt
     2521 cgcgctggga cgtcggctgg ctgatcggac accccgcccg cggcaacggc gaaccggatc
     2581 cggcaccgac gcgcgtgcag gcgagttatg cgggcatcgc catactcggt gacgccggac
     2641 gcaagctgac ccgtttccgt cccgacggca ccgccagcgg ctccaccaac acctggatct
     2701 tctgccacaa gggccgcacc gagcaggccc tagtcgtg
//
LOCUS       DASSVL010000038         2169 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_918837, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000038 DASSVL010000000
VERSION     DASSVL010000038.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2169)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2169)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2169
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_918837"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..313)
                     /locus_tag="VFM52_00595"
     CDS             complement(<1..313)
                     /locus_tag="VFM52_00595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015446792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0019346 - transsulfuration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent transferase"
                     /protein_id="HET8763696.1"
                     /translation="MPRKLPTASLGFGTRAIHAGQHPDPTTGAIMTPIYATSTYVQES
                     PGKHKGFEYSRTQNPTRIAYEGCVASLEGGVAGFAFGSGLAGAATVLDLLDSGSHVIA
                     MD"
     gene            499..1548
                     /gene="rfbB"
                     /locus_tag="VFM52_00600"
     CDS             499..1548
                     /gene="rfbB"
                     /locus_tag="VFM52_00600"
                     /EC_number="4.2.1.46"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015446791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008460 - dTDP-glucose 4,6-dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009243 - O antigen biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0019305 - dTDP-rhamnose biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-glucose 4,6-dehydratase"
                     /protein_id="HET8763697.1"
                     /translation="MRTLLVTGGAGFIGANFVLQAIADGLTVVNLDKLTYAGNLDTLA
                     ALKGNPRHVFAHGDIGDRALVGKLLAEHRPDAIVNFAAESHVDRSIDGPTEFVQTNVV
                     GTLGLLECARDYWRGLDGAKRDAFRFLHVSTDEVYGSLGATGLFTETTAYAPNSPYSA
                     SKAASDHLVRAFHHTYGLPTLTTNCSNNYGPFQFPEKLIPLVTAKALAGEPLPVYGDG
                     QNIRDWLYVGDHCSAIRRVLEAGRVGETYNVGGNSERNNLTVVKTICALLDERHPLAD
                     GRQRESLITFVKDRPGHDRRYAIDSTKLQHELGWKPTHTFESGIADTVDWYLAHQPWV
                     KRVLDGSYRMERLGA"
     gene            1545..>2169
                     /gene="rfbA"
                     /locus_tag="VFM52_00605"
     CDS             1545..>2169
                     /gene="rfbA"
                     /locus_tag="VFM52_00605"
                     /EC_number="2.7.7.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007510937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008879 - glucose-1-phosphate
                     thymidylyltransferase activity [Evidence IEA];
                     GO_process: GO:0009243 - O antigen biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0019305 - dTDP-rhamnose biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphate thymidylyltransferase RfbA"
                     /protein_id="HET8763698.1"
                     /translation="MNTQRKGLILAGGSGTRLHPITRAVSKQLLPVYDKPMVYYPLAT
                     LMLAGIREVLIINTPHEQAMFQRLLGDGSQWGIEISYAVQPSPDGLAQAFTIGRDFIA
                     GQPSCLVLGDNIFYGHGFTDRLKRAAAREHGATVFGYWVKDPERYGVAEFDATGKVVG
                     LEEKPAQPKSHYAVTGLYFYDARVCDFAASLKSSPRGELEITDLNRCY"
BASE COUNT          382 a          740 c          685 g          362 t
ORIGIN      
        1 cgtccatcgc aatcacgtgg ctgcccgaat ccagcagatc cagcaccgtg gcggcgcccg
       61 ccaggccgga gccgaaggcg aagccggcca cgccgccctc gaggctggcg acacaaccct
      121 cgtacgctat gcgcgtcgga ttctgggtgc gcgagtattc gaagcccttg tgcttcccag
      181 ggctctcctg cacgtaggtc gacgtggcgt agatcggcgt catgatggcg ccagtcgtgg
      241 ggtcggggtg ttggccggca tggatggcac gagtgccgaa tccgaggctg gccgtgggca
      301 actttcttgg catggcgtgc accgcgcagg aggacagccg aggctgtcag gagacgaagc
      361 ctcgcattgt acctgcaccc gcttccctga ccttaacgaa aagccttggc gagccactgg
      421 accgcgtcac ggcaggcggg ctggaccggc agtcgtgcga gaatagaagc cttattgcca
      481 cacggatcac gtgcccccat gagaaccctc ctcgtcaccg gcggcgccgg cttcatcggt
      541 gcgaatttcg tgctgcaggc cattgccgac ggactcaccg tcgtcaatct ggacaagctc
      601 acctacgccg gcaacctcga cacgctggcc gcgctcaagg gcaacccgcg ccacgtgttt
      661 gcgcacggcg atatcggcga ccgtgcgctg gtgggcaagc tgctggccga gcaccggccc
      721 gatgcgatcg tcaactttgc cgcggagtcg catgtggatc gctcgatcga cggcccgacg
      781 gaattcgtgc agaccaatgt ggtgggcacg ctggggctgc tggaatgcgc acgggattac
      841 tggcgcggcc tcgacggcgc gaagcgtgat gccttccgct tcctgcacgt ctccaccgac
      901 gaggtctacg gctcgctcgg cgccactggc ctgttcaccg aaaccacggc gtatgcgccg
      961 aactcgccct actccgcgtc caaggcggcc tccgaccacc tggtgcgcgc cttccaccac
     1021 acctacggcc tgcccacgct caccaccaat tgctcgaaca actacgggcc gttccagttc
     1081 ccggagaagc tcatcccgct ggtcaccgcc aaggcgctgg cgggcgagcc gttgccggtc
     1141 tatggcgatg gccagaacat ccgtgactgg ctgtacgtgg gcgaccactg cagcgcgatc
     1201 cggcgcgtgc tggaggccgg ccgcgtgggc gagacctaca acgtcggcgg caactccgaa
     1261 cgcaacaacc tcacggtggt gaagacgatc tgcgcgctgc tggacgagcg ccacccgctg
     1321 gccgatgggc gccagcgcga gtcgctgatc accttcgtca aggatcgccc cggtcacgat
     1381 cgccgctacg cgatcgactc caccaagctg cagcacgagc tgggctggaa gccgacgcac
     1441 accttcgaat ccggcatcgc cgacaccgtc gactggtacc tcgcgcacca gccgtgggta
     1501 aaacgcgtgc tggatggcag ctatcgcatg gagcggcttg gcgcatgaac acgcaacgca
     1561 agggcctcat tctcgccggc ggctccggca cccggctgca cccgattacc cgtgcggtga
     1621 gcaaacagct cctaccggtg tacgacaagc cgatggtgta ctacccgctg gccacgctga
     1681 tgcttgcggg catccgcgaa gtgctcatca tcaacacgcc gcacgagcag gcgatgttcc
     1741 agcgcctgct gggcgacggc tcgcaatggg gcatcgagat cagctatgcc gtgcaaccct
     1801 cgccggacgg actggcgcag gccttcacca tcggtcgcga cttcatcgcc ggccagccca
     1861 gctgtctggt gctgggcgac aacatcttct acggtcacgg tttcaccgat cggttgaagc
     1921 gcgccgcagc gcgtgaacac ggcgccaccg tgttcggcta ttgggtgaag gatcccgagc
     1981 gctacggcgt ggccgaattc gacgccacgg gcaaggtggt cgggctggag gagaagcctg
     2041 cacagccgaa gtcgcattac gccgtcaccg gcctctactt ctacgatgcc cgcgtctgcg
     2101 actttgctgc ctcgttgaaa tcgtcgccgc gtggcgagtt ggagatcacc gacctcaacc
     2161 gctgctacc
//
LOCUS       DASSVL010000039         2362 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1328519,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000039 DASSVL010000000
VERSION     DASSVL010000039.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2362)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2362)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2362
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1328519"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..678)
                     /locus_tag="VFM52_00610"
     CDS             complement(<1..678)
                     /locus_tag="VFM52_00610"
                     /inference="COORDINATES: protein motif:HMM:NF021367.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2066 domain-containing protein"
                     /protein_id="HET8763699.1"
                     /translation="MMRILLSLLLVLGVATWASAQTPPPAAGAATVVPASPYSAIVPV
                     AGTSDAQRSAAIAAALAQVLQQASPGFTPSADMLANASGYVRNFKYRRATSGAGLELQ
                     VDFDPGAVGRLVAQGGGAPPGAAGTTATSGGGAAAAGATGSTPASGTGTLWVSGIDGS
                     HAFASLLALLRGDDQLHDVVPVGAEGHGVLLQVGYSAPLATVLTALETPNGHLAQAAQ
                     PHAGADAT"
     gene            780..1823
                     /gene="purM"
                     /locus_tag="VFM52_00615"
     CDS             780..1823
                     /gene="purM"
                     /locus_tag="VFM52_00615"
                     /EC_number="6.3.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007511559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004641 -
                     phosphoribosylformylglycinamidine cyclo-ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine cyclo-ligase"
                     /protein_id="HET8763700.1"
                     /translation="MTANDEALSYRAAGVDIDAGNAVVERIKPLVGKTFRPEVMGGLG
                     GFGALFNLAGKYREPVLVSGTDGVGTKLRLAQQLNRHDTIGIDLVGMCVNDVLVQGAE
                     PLFFLDYFATGKLDVDTTVAVVGGIAKGCELSGCALIGGETAEMPDMYPPGEYDLAGF
                     NVGAVEKSEIIDGSAIRAGDVVLGIASSGPHSNGFSLIRRIVARAGSPFDLDIGGTTL
                     ADALMAPTTLYVKPVLALLRERRGVLHGMAHITGGGLKENIIRVVPDGLGLAIDSSSW
                     KLPPVFDWLQREGKVPREEMWRTFNCGIGFTLILAPADVAGVRAALAQSGLSSTPIGE
                     VVAAAGDARVHIA"
     gene            1820..>2362
                     /gene="purN"
                     /locus_tag="VFM52_00620"
     CDS             1820..>2362
                     /gene="purN"
                     /locus_tag="VFM52_00620"
                     /EC_number="2.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017462139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004644 - phosphoribosylglycinamide
                     formyltransferase activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylglycinamide formyltransferase"
                     /protein_id="HET8763701.1"
                     /translation="MTLPIAVLASGRGSNLAALIDARAAGTLPVTFTLVAGDKADAPA
                     LRNAEAHGIPTFALDPKSFASRGEFDAALFRHVAASGAQLVVLAGYMRILDAAVTAQW
                     TGRMINIHPSLLPKYRGLHTHRKVLQAGDAEHGASVHFVSAELDGGPVIAQARIAVRT
                     GDTEDSLAVRLLPHEHALLTA"
BASE COUNT          379 a          842 c          795 g          346 t
ORIGIN      
        1 cgtggcgtcc gctccagcgt gcggctgggc cgcctgcgcc aagtggccat tgggcgtttc
       61 cagcgcggtc agcacggtcg ccagcggcgc actgtagccc acctgcagca gcactccgtg
      121 gccctcggcg cccaccggca ccacgtcatg caactggtca tcgccgcgca gcaacgccag
      181 caggctggcg aacgcgtggc tgccgtcgat gccgcttacc cacagcgtgc cggtgccgct
      241 ggcaggggtg ctgccggtgg cccccgcggc cgcggcgcca ccgccggagg tcgccgtggt
      301 acccgctgcg ccgggcggcg cgccgccgcc ctgggcgacc agccgaccaa ccgcgccggg
      361 atcgaaatcc acctgcaatt ccagccccgc gccggacgtg gcacgccggt acttgaagtt
      421 gcgcacatag cccgatgcgt tggccagcat gtcggcactg ggcgtgaagc cgggcgatgc
      481 ctgctgcaac acctgcgcca gggctgcggc gatggccgcg ctgcgctggg cgtcgctggt
      541 gccggccacc ggaacaatgg cggaataggg actggctggc acaacggttg cggcaccagc
      601 cgcgggcggc ggggtctgcg ccgacgccca cgtggccacc ccaagcacca gcagcagcga
      661 caacaggatt cgcatcatgg ccatgcacct ccatccggac gccgcaagtc tgcccaatca
      721 cggcgccagc gtctatcatt gccgatcccg atccgaccgg catgccctgc cccaccgccg
      781 tgactgccaa cgacgaagcc ctttcctacc gcgccgcagg cgtggacatc gatgccggca
      841 acgcggtggt cgaacgcatc aagccgctgg tcggcaaaac ctttcgtccg gaagtgatgg
      901 gcgggctggg tggcttcggc gcactcttca acctggccgg gaaataccgc gaaccggtgc
      961 tggtatccgg cacggacggc gtcggcacca agttgcgcct ggcccagcaa ctgaaccgcc
     1021 acgacaccat cggcatcgac ctggtcggca tgtgtgtcaa cgacgtgttg gtgcaaggcg
     1081 cggagccgct gtttttcctg gactacttcg cgaccggaaa gctcgacgtc gataccaccg
     1141 tcgcggtggt gggcggtatc gccaagggct gcgaattgtc gggctgcgcg ctgatcggcg
     1201 gcgaaaccgc cgagatgccc gacatgtacc cgccgggcga atacgacctt gcgggcttca
     1261 acgtcggcgc ggtcgaaaaa tcggaaatca tcgatggcag cgcgatccgc gccggcgacg
     1321 tggtgctggg catcgcgtcc agcggcccgc actccaacgg cttctcattg atccgcagga
     1381 tcgtcgcgcg cgccggctcg ccattcgacc tcgacatcgg cggcaccacg ctggccgacg
     1441 cgctgatggc gccgaccacg ctgtacgtga agccggtcct cgcgctgttg cgcgaacggc
     1501 gcggcgtgct gcacggcatg gcccacatca ccggcggcgg cctgaaggaa aacatcatcc
     1561 gcgtggtgcc ggacggactg ggcctggcca tcgattcgtc gagctggaaa ctgccgccgg
     1621 tgttcgattg gctgcagcgc gaaggcaaag tgccgcgcga ggaaatgtgg cgcacgttca
     1681 actgcggcat cggcttcacg ctgatccttg cgccagccga cgtcgccggc gtgcgcgccg
     1741 cgctggcgca atccggcctg tccagcacgc ccatcggcga agtggtcgcg gccgcgggcg
     1801 acgcacgcgt acacatcgca tgacgctgcc catcgcggta ctggcttccg gtcgcggcag
     1861 caacctggcg gcgctgatcg acgcccgcgc ggcgggcacg ctgccagtca cgttcacctt
     1921 ggtcgccggc gacaaggccg acgcgccggc actgcgcaac gccgaggccc acggcattcc
     1981 caccttcgcg ctggatccga aatcatttgc ctcgcgcggc gaattcgacg cggcgctgtt
     2041 caggcacgtg gccgcaagcg gcgcgcagct ggtggtgctg gccggctaca tgcgcatcct
     2101 ggacgccgcg gttaccgcgc aatggacggg gcggatgatc aacatccatc catccctgtt
     2161 gccgaagtac cgcggcctgc acacccaccg caaggtgttg caggccggcg acgccgagca
     2221 cggcgccagc gtgcatttcg tcagcgcgga actggatggc ggccccgtga tcgcacaggc
     2281 ccgcatcgcg gtgcgcacgg gcgacaccga ggactcgctg gccgtacgcc tgctgccgca
     2341 cgaacacgcg ctgctgacag cg
//
LOCUS       DASSVL010000040         5597 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1102545,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000040 DASSVL010000000
VERSION     DASSVL010000040.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 5597)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5597)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5597
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1102545"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(194..1186)
                     /locus_tag="VFM52_00625"
     CDS             complement(194..1186)
                     /locus_tag="VFM52_00625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008435022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MoxR family ATPase"
                     /protein_id="HET8763702.1"
                     /translation="MDMPEVATRDRLQQAFAALRTSLQAAVIGQPKLVDCLLVALLAD
                     GHLLVEGAPGLAKTTAVKALAARIAADFHRVQFTPDLLPADLTGTDVFRPQSGSFEFE
                     RGPLFHDIVLADEINRAPAKVQSALLEAMAERQITVGRNTWPLPELFMVMATQNPIEQ
                     EGTFALPEAQLDRFLLHVTIGYPDAAAELAILRLAREQAMHAPQAAAPAELLGKADVF
                     AARAAAMGVHLAPALEEYLTQIVLATRDAGRYGPELKRWIAWGASPRATIALDRCARA
                     EAWLAGRDYVLPEDVHAIVHEVLRHRVLLSYEAEAEGVHADQVIARLLDLVPLP"
     gene            complement(1326..3647)
                     /gene="pilQ"
                     /locus_tag="VFM52_00630"
     CDS             complement(1326..3647)
                     /gene="pilQ"
                     /locus_tag="VFM52_00630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015448755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009297 - pilus assembly [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus secretin PilQ"
                     /protein_id="HET8763703.1"
                     /translation="MSNHNQSVQGRVMRHAMRCFLSVLLFVGGGFATAALAAGTHTLK
                     DINYTTLPDGSVQLHLNFAGTPPQPRIFTTDHPARIAVDFADTDTTAPRHTEVGQGAT
                     SGVSAVAAGGRTRVIVELMRPVPYQSAVQGDSLVLTVASGSAPRTAAAAPAPTPRSIT
                     TASVIDPSKRVPATAAGAISVSNVDFRRAANGAGRVVVSFNNAGADAQMRTIGDKVEV
                     SIPNASVPPNLAQRLDTQDFATPVQSITTRVSPVGGVQLTIATKGVVETSAYQEGRQY
                     VVEVAPKQGATGPAHAVGPNQALDQHPVYTGKRATFNFQDIPVRSVLQLIADTSGLNI
                     VASDSVTGSITLRLVNVPWDQALDVILRAKGLDKRRDGNVIWVAPQGELAKYEEDQAA
                     ARMKAEDNAPLITSYIPISYGKATDIAKLLTTGSMQGGGSTGGAGGANVSRGFLSPRG
                     SVSFDERTNTLLLNDTAEKTAQIRKLVAQLDKPVQQVLIESRIVIATDDFARDLGVKW
                     GVSANHVNGNQIITTSPTGDGASQYATNVWNNTVQYNNAVTDYLANGGTGAPPHPGTV
                     TIPGGYNVNLPVSTPAGQLGLAILGKNYLVDLELSAAQTEGRSEVISSPRVITANQQQ
                     AVIRQGQEIGYVTYQGGLGGGGAVGQTASVQFKDAVLELKVTPTITADNRVYLAINVT
                     KDSLAQFLNTPNGQVPQINTQSVNTSVLVDNGQTVVLGGIYEINKNNSVTKVPGLGDL
                     PGIGFLFRKTSRNNTKAELLIFVTPRILNDSLQ"
     gene            complement(3667..4206)
                     /locus_tag="VFM52_00635"
     CDS             complement(3667..4206)
                     /locus_tag="VFM52_00635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007509495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly protein PilP"
                     /protein_id="HET8763704.1"
                     /translation="MRLSMTWRPATLVKLALLLATAVMLAGCTRGTSDLREWIAQQKA
                     KKGAPIPPLPVIKTFETFTYADQDLRDPFAPSAAEQDTGVTAGPRPDQNRPKQPLEMF
                     ALDSLKMVGTIGSGGGIEALIKDPAGVIHPVHRGEYMGQNYGHITAISDDHIDLVELV
                     SNGNGGWMERSASIALGEK"
     gene            complement(4206..4877)
                     /gene="pilO"
                     /locus_tag="VFM52_00640"
     CDS             complement(4206..4877)
                     /gene="pilO"
                     /locus_tag="VFM52_00640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007807213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0043107 - type IV pilus-dependent motility
                     [Evidence IEA];
                     GO_process: GO:0043683 - type IV pilus assembly [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type 4a pilus biogenesis protein PilO"
                     /protein_id="HET8763705.1"
                     /translation="MKLIDDLRTLDRNNVGGWPKSVKLFFTALAFGLVVLLGWYFYVS
                     SQQDELASLANKEEQLKTEFSTKQAKAVNLDALQQQLDEMKDMLRQLLRQLPSKTEMP
                     ELLIDISQTALSAGLQVDSFVPQPEVPKDFYAEKPIQLKMVGTYHQFGTFISGVASLP
                     RVVILTMHDVALTPEHASKNGTSTDGELVLQGTVKTYRYLDEDEAAQAAKDSGKTPAK
                     AGGHK"
     gene            complement(4874..5506)
                     /locus_tag="VFM52_00645"
     CDS             complement(4874..5506)
                     /locus_tag="VFM52_00645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015448757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilN domain-containing protein"
                     /protein_id="HET8763706.1"
                     /translation="MAHVNLLPWRAERHKLREREFYGQLGAAFVAGLGFVLLWSFWMV
                     ARIDNQNDRNIMLQNEIKQVDVKIDKIKDLEKVREHLLARKQIIEQLQTDRSKMVHLF
                     DELVKTIPPSVRLASLKQAGDTMTLDGVAQSNASVAEYMRNIESSPWMGHVDLTKTEN
                     THDASRTPYTFGLTVALRKPKADDGGPAAAGSTAAAKPAATPAADAEAKP"
BASE COUNT          801 a         1853 c         1921 g         1022 t
ORIGIN      
        1 taggcgcgcg actcggcgta gtccatgcca cggccgtaaa ggcggctggc ctgctggccg
       61 ctgcgtggcg cgcgactcgt cgccagcggc atgtgcaggc ggccgacgtg gcgcccgagc
      121 gccaccagtt cggccagcga cacccgggtc acgccgtcgc cgtcgaccgg cgacacggcg
      181 ggcgcctccg tcgtcacggc agcggcacga gatccagcag gcgcgcaatc acctgatcgg
      241 cgtggacgcc ttcggcctcg gcctcgtagc tcaggagcac gcggtggcgc agcacttcgt
      301 gcacgatggc atgcacgtct tccggcagca cgtagtcgcg cccggcaagc cacgcctcgg
      361 cgcgcgcgca gcggtccagc gcgatcgtcg cacgcgggct cgcgccccag gcgatccagc
      421 gcttgagctc gggcccgtag cggccggcgt cgcgcgtcgc cagcacgatc tgggtgaggt
      481 attcctccag cgccggcgca aggtgcacgc ccattgccgc cgcgcgggcg gcgaacacgt
      541 cggccttgcc cagcagctcg gccggtgcgg ccgcttgcgg cgcgtgcatc gcctgctcgc
      601 gggccaggcg caggatcgcc agctcggcgg ccgcgtccgg gtagccgatg gtcacgtgca
      661 gcaggaagcg gtcgagctgg gcctcgggca acgcgaacgt gccctcctgc tcgatcgggt
      721 tctgggtcgc catcaccatg aacaactcgg gcagcggcca ggtgttgcgg cccaccgtga
      781 tctggcgttc cgccatcgcc tcgagcagcg ccgattgcac cttggccggt gcgcggttga
      841 tctcgtcggc cagcacgatg tcgtggaaca gcgggccacg ctcgaactcg aaactgcccg
      901 actgcgggcg aaacacgtcg gtgccggtca agtcggccgg caacaggtcc ggcgtgaact
      961 gcacgcggtg gaaatcggcg gcaatgcgtg cggccagcgc cttcaccgcc gtggtcttgg
     1021 ccagccccgg cgcgccttcc accagcaggt gcccgtcggc gagcagtgcc accagcaggc
     1081 agtcgaccag cttcggctgg ccaatgaccg ccgcctgcag ggaagtacgc aacgcggcaa
     1141 aggcttgctg caggcgatcg cgcgtggcga cttcgggcat gtccatcatc gggtttccag
     1201 tgtgctcggc gccgctatcg accacggcca acgctggaag tttagtcgag tggcgcacgc
     1261 gttcaggccc gcaacgcagg aaggcggccg cagccgcctt cccgtttgtc gccatgtacc
     1321 cgcgtttact gcagcgaatc gttcaagatg cgcggtgtca cgaagatcag cagctccgcc
     1381 ttggtgttat tgcgcgacgt cttgcggaac aggaagccga tgccggggag atcgcccagg
     1441 ccaggcacct tggtcacgct gttgttcttg ttgatttcgt agatgccgcc aagtaccacg
     1501 gtctggccgt tgtccaccag caccgaggtg ttcaccgact gggtgttgat ctgcggcacc
     1561 tggccgttcg gcgtgttgag gaattgcgcg agcgagtcct tggtcacgtt gatggcgaga
     1621 tacacgcggt tgtcggcggt gatcgtcggc gtcaccttga gttccagcac cgcgtccttg
     1681 aactgcaccg acgcggtctg gccgacggca ccaccaccac ccaggccacc ttggtaggtg
     1741 acgtagccga tctcctggcc ctggcggatg accgcctgct gctggtttgc ggtaatgacg
     1801 cgcgggctcg atatcacctc gctgcggccc tcggtctgtg cggccgaaag ctcgaggtca
     1861 acgaggtagt tcttgccgag gatcgccagg ccgagctggc cggccggcgt gctcaccggc
     1921 aggttcacgt tgtagccgcc gggaatggtc accgtgcccg ggtgcggcgg cgcgccggtg
     1981 ccaccgttgg ccaggtagtc ggtcacagcg ttgttgtact ggacggtgtt gttccagacg
     2041 ttggtggcgt actggctcgc gccgtcgccg gtcggcgagg tagtgatgat ctggttgccg
     2101 ttgacgtggt tggccgacac gccccacttc acgccgaggt cgcgggcgaa gtcgtcggtg
     2161 gcgatcacga tgcgcgactc gatcagcacc tgctgcaccg gcttgtcgag ctgcgcgaca
     2221 agcttgcgga tttgcgcggt cttttccgcc gtgtcgttca gcagcagcgt gttggtgcgt
     2281 tcgtcgaacg agacgctgcc gcgcggggat aggaagccgc gcgagacgtt cgcgccgccc
     2341 gcaccaccgg tcgagccacc gccctgcatg ctgccggtgg tcaggagctt ggcgatgtcg
     2401 gtggccttgc cgtagctgat cgggatgtag ctggtgatca gcggcgcgtt gtcctcggcc
     2461 ttcatgcgcg cggcggcctg gtcctcttcg tacttggcca gctcaccctg cggcgccacc
     2521 cagatcacgt tgccgtcgcg ccgcttgtcc agccccttgg cgcgcaggat cacgtccagc
     2581 gcctggtccc acggcacgtt gaccagccgc agcgtgatgc tgccggtgac gctgtcggag
     2641 gcgacgatgt tgaggcccga ggtgtcggcg atcagctgca gcaccgagcg caccgggatg
     2701 tcctggaaat tgaaggtggc gcgcttgccg gtgtagaccg gatgctggtc gagcgcctgg
     2761 ttcggaccga cggcgtgcgc ggggccggtc gccccctgct tgggcgccac ctcgaccacg
     2821 tactgccggc cttcctggta ggccgaggtc tccaccacgc ccttggtcgc gatcgtcagc
     2881 tgcacgccgc ccaccgggct cacccgcgtg gtgatcgact gcaccggggt ggcgaaatcc
     2941 tgggtgtcga ggcgctgcgc gaggttcggc ggcacgctcg cgttgggaat gctgacctcg
     3001 accttgtcgc cgatggtgcg catctgcgcg tcggcaccgg cgttgttgaa gctgaccacc
     3061 acgcggcccg cgccattcgc ggcgcggcgg aaatcgacgt tgctgacgct gatcgcgcct
     3121 gccgccgtgg ccggcacccg cttcgaggga tcgatgaccg acgcggtggt gatgctgcgt
     3181 ggcgtcggcg ccggcgcggc agccgccgtc cgcggcgcac tgccgctcgc caccgtgagc
     3241 acgaggctgt ccccctgcac ggccgactgg tatggcaccg ggcgcatcag ctcgacgatc
     3301 acgcgggtgc ggccgccggc ggccaccgcc gacacgccgg aagtggcgcc ctggccgacc
     3361 tcggtatgcc gcggcgccgt ggtgtcggtg tcggcgaaat cgaccgcgat gcgcgccggg
     3421 tgatcggtgg tgaagatgcg cggctgcggc ggcgtgccgg cgaagttcag gtgcagctgc
     3481 acgctgccat cgggcagggt cgtgtagttg atgtccttca gcgtatgggt gccggcggcc
     3541 agcgccgcgg tggcgaaacc gccgccgacg aacaacagca cggaaaggaa acaacgcatg
     3601 gcgtggcgca tgacccggcc ctggacggat tggttgtggt tgctcattgg atcggcccct
     3661 gtatccctat ttctcgccga gcgcgatgct ggccgaacgt tccatccagc caccattgcc
     3721 gttggatacc agctcgacca gatcgatgtg gtcgtcgctg atcgccgtga tgtggccgta
     3781 gttctggccc atgtattcgc cgcggtgcac cggatggatc acgccggccg gatccttgat
     3841 gagggcctcg atgccaccgc cactgccgat cgtgccgacc atcttcaggc tgtcgagcgc
     3901 gaacatttcc agcggctgct tgggccggtt ctggtcgggc cgcggcccgg cggtgacgcc
     3961 ggtgtcctgc tcggccgcgc tcggcgcaaa cgggtcacgc aggtcctggt cggcgtaggt
     4021 gaaggtttcg aaggtcttga tcaccggcag cggcgggatc ggcgcaccct tcttggcctt
     4081 ctgctgggcg atccattcgc gcaggtcgga agtgccgcgc gtgcagccgg ccagcatcac
     4141 cgccgtggcc agcagcagcg caagcttcac cagggtggcc gggcgccagg tcatggagag
     4201 tctcatcact tgtgccctcc tgccttcgcc ggcgtcttgc ccgagtcctt cgccgcctgc
     4261 gccgcctcgt cttcatcgag gtaacggtag gtcttcaccg tgccctgcag caccagctcg
     4321 ccatcggtgg aggtgccgtt cttgctggcg tgctccggcg tcagcgcgac gtcgtgcatg
     4381 gtcaggatca ccacccgcgg cagcgatgcc acgccgctga tgaaggtgcc gaactggtgg
     4441 taggtgccga ccatcttgag ctggatcggc ttctccgcgt agaagtcctt cggcacctcg
     4501 ggctgcggca cgaaggagtc gacctgcagg ccggcagaca gcgccgtctg cgagatgtcg
     4561 atcaacagct cgggcatctc ggtcttgctc ggcagctggc gcagcagctg gcgcagcatg
     4621 tccttcatct cgtcgagctg ctgctgcagg gcgtcgaggt tcaccgcctt ggcctgcttg
     4681 gtgctgaact cggtcttgag ctgctcttcc ttgttggcca gcgaagccag ctcgtcctgc
     4741 tgactgctca cgtagaaata ccagccgagc aagaccacga gaccaaacgc cagcgcggtg
     4801 aagaacagct tgaccgactt cggccagccg ccgacgttgt tgcggtcgag cgtgcgcaga
     4861 tcgtcgatga gcttcatggc ttggcctccg catccgcagc cggagtcgcc gcaggcttcg
     4921 ccgcggctgt gctgccggcc gcagccgggc cgccgtcatc cgccttgggc ttgcgcagcg
     4981 ccacggtcag gccgaacgtg tacggcgtac gcgaggcatc gtgcgtgttc tcggtcttgg
     5041 tcaggtcgac gtggcccatc cacggcgagc tttcgatgtt gcgcatgtat tcggcgacgc
     5101 tggcgttgga ctgcgcgacg ccatccagcg tcatcgtgtc gccggcctgc ttgaggctcg
     5161 ccaggcgcac gctgggtggg atggttttca ccagttcgtc gaacagatgc accatcttcg
     5221 agcgatcggt ctgcaactgc tcgatgatct gcttgcgcgc caggaggtgc tcgcgcacct
     5281 tttcgagatc cttgatcttg tcgatcttga cgtcgacctg cttgatctcg ttctgcagca
     5341 tgatgttgcg gtcgttctgg ttgtcgatgc gcgcgaccat ccagaacgac cacagcagga
     5401 cgaagcccag gccggcgacg aacgccgcgc cgagctgccc gtagaactcg cgctcgcgca
     5461 acttgtggcg ttcggcacgc cacggcagga ggttgacgtg tgccatcagt cgaagctcct
     5521 catcgcgagg ccgaccgcaa tcatcaacgc gggtgcatcc tgggtcagca tctggccctg
     5581 caccttgggt gacatcg
//
LOCUS       DASSVL010000041         7185 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1385068,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000041 DASSVL010000000
VERSION     DASSVL010000041.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 7185)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7185)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7185
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1385068"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2542)
                     /locus_tag="VFM52_00650"
     CDS             complement(<1..2542)
                     /locus_tag="VFM52_00650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019183507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 3 N-terminal
                     domain-containing protein"
                     /protein_id="HET8763707.1"
                     /translation="MFRFRWLWLACAALAASGGETWARAATPSATDTRGPAATHYTDW
                     PAIKSELPADPALAARARRIVAGMTLAQKIGQMTQAEIKTATPEDVRKYYLGSVLNGG
                     GSWPGGDKHASIHDWLNLADAYYAASMATGLPTPIPVIWGTDAVHGDSNVYGATLFPH
                     NIGLGAAHDPALVRAIGAATAKAVRATGVQWAFAPTVAVAQDARWGRTYESFSSAGPL
                     VGEYAQAYVEGLQGDFGDHDVIATAKHFIGDGSTWQGKDQGQSRVSREAMINVHGAGY
                     YGALRAGAQSVMISYNSWDDLGQHVDYGKISGAQALVTGVLKDRLGFGGLVVSDWNAI
                     GQLPGCSNADCPLAVNAGIDLFMVPDDWKAFIANTMREVQEGKIPLARIDDAATRIIE
                     VKLRMGLFDGKRPSQRAGAGDAALLEDRDLARRAVRESLVLLKNDHAVLPLKAGAKIL
                     VVGKGADSLSNQAGGWSLTWQGTDNTNADFPHATSILAGLREADGAGNVSYREDARGV
                     DAAKFDAIVAVIGEKPYAEMMGDIPASATLRHTDRYPEDLAVLDAVAKAHKPVVTVFL
                     SGRPLFVNDLLNRSDAFVAAWLPGSEGAGVADVLFARKLGAARANFRGTLSMPWPAVP
                     CPDAPDAGAAAWLFPVGYGLRYGQPHELGRLPTEASVTSCGAVATVGVFHTLAVPPFS
                     LYLEAAGQAPHELGPDLNGVTEWPAVHSALRVATVQVNTQQDAKSVTWLAPARFLARS
                     AAPRDLSAAAKAGAAMQFDTVVAQPPQGAATLFVGCGARCRGGVDLGRLVAGFAPGSR
                     HTVTVPLSCFARAGADLSKVDVPFGVAAAAPFSAAFADVKLVMADAAAN"
     gene            complement(2672..3235)
                     /locus_tag="VFM52_00655"
     CDS             complement(2672..3235)
                     /locus_tag="VFM52_00655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007511712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpH family outer membrane protein"
                     /protein_id="HET8763708.1"
                     /translation="MVPATAVAQAAPAANPLGGNAIPGLCLLSREAVFAQSKVGQAAS
                     VRLKSLAQGQQTQLENQKKALDTDIQAFQQKQASLTEAQRQQQGGALQGRMQAFQGQV
                     HDLEERVDATRGKVMQQIGQHAQPVVEAAYNSHHCGLLLNRDAVLGGNTTNDLTPDVI
                     KGLDAKITTLSFNLEPVSAAAPAPAGK"
     gene            complement(3427..3939)
                     /locus_tag="VFM52_00660"
     CDS             complement(3427..3939)
                     /locus_tag="VFM52_00660"
                     /EC_number="2.1.1.63"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008439132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003908 -
                     methylated-DNA-[protein]-cysteine S-methyltransferase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylated-DNA--[protein]-cysteine
                     S-methyltransferase"
                     /protein_id="HET8763709.1"
                     /translation="MNELMGLAYLPVATPLGTFVVAARDEAVAGGWFEGQKYFPAISA
                     EAGWREASTPVLDEARRELDAYFAGRLTRFEVPLAPDGTEFQRKVWTALCAVPFGETT
                     TYAALAQAIGRPGAFHPVGAAVGRNPMSLFVPCHRALGSDGSLTGYAGGLTRKRWLLD
                     HESREPRLFD"
     gene            complement(3959..4738)
                     /locus_tag="VFM52_00665"
     CDS             complement(3959..4738)
                     /locus_tag="VFM52_00665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007511742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NrdJb"
                     /protein_id="HET8763710.1"
                     /translation="MAIKIAKKITGYAVVQPEAPAVPAAPAAEPKAAKAEPKAEVSQM
                     HESLERPETLVGSTFKIKSPLFEHALYVTINDIVHNAGTKYEMRRPFEIFINSKNMDH
                     FQWIVALTRILSAVFRKGGDVAFIVEELKAVFDPRGGYFKAGGIYMPSIVAEIGGVIE
                     QHMKNIGLIHDPEMSDAQRALIAEKRAAYEAIAARSNAAHAGHAHAEPAAAPKAADAE
                     ADAGSSGFPAGAAMCSKCNTQALVLMDGCQTCLNCGYSKCG"
     gene            complement(4828..5652)
                     /locus_tag="VFM52_00670"
     CDS             complement(4828..5652)
                     /locus_tag="VFM52_00670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007809240.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8763711.1"
                     /translation="MSIDNEVEASSSVTPPAPDEPVITEVVVETIAVVPDEPAFDPEP
                     VLVPVVVTALPATAAREPAANKPVARKPAARKPAAKKAAVAKKPAAKVAKKAAATKKS
                     AAKAAKKPVARKAATRKAAARKAAVKKVAVKKVAAKKAAAKKAIKKSVAKAVRKPAPK
                     KVAAKKAGVRKAVKKAAPKKLVRQPAKQRATAGKAAKKAVKKMPGKVVKRAAAKPAKK
                     VSSKKTAAKAAVRKAAPKKAAATKKVAKTAVKRSTASRKGSSVAGRKPVARKAARK"
     gene            complement(5699..>7185)
                     /locus_tag="VFM52_00675"
     CDS             complement(5699..>7185)
                     /locus_tag="VFM52_00675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009574097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ribonucleoside-diphosphate reductase,
                     adenosylcobalamin-dependent"
                     /protein_id="HET8763712.1"
                     /translation="AVEHDEDWPLIFPVHVKEQGELDLDDPAKVVWREWPTHENYVER
                     DDGLVACKIYGHIRARHLWDMIMVSTYDYAEPGFILIDRVNEMNNNWWCEHNRATNPC
                     GEQPLPPYGSCLLGSVNLTRFVHDPFGPKARFDWDEYREVVKVFTRLLDNVVDINGLP
                     LEQQRKEILSKRRHGMGFLGLGSTLAMLRLRYGSADAVAFTEDVSREMAVAGWEVALD
                     LAKEKGAAPVLAQDYAVTGDMLRKRPEMARDGWKVGDHVPGRVLHAKYSRYMQRIAQV
                     APNLVAELAETGARFTHHTSIAPTGTISLSLANNASNGIEPSFAHHYSRNVIREGRKT
                     KEKISVYSYELLAYRALINAEAMPDSDDPKVKLPDYFVAADDIGPKQHVDIQAAAQKW
                     VDSSISKTANVPTDYPYEKFKDIYFYAYKQGLKGCTTFRFNPAAFQGVLVKDSDLAHT
                     LYRFELEDGSVVELHGNEEVEYDGETHTAANLFDALKEGYYGKF"
BASE COUNT          990 a         2539 c         2399 g         1257 t
ORIGIN      
        1 cgttggccgc ggcgtcggcc atcacgagct tgacgtcggc aaacgcggcg gagaacggcg
       61 ccgccgccgc cacgccgaac ggcacgtcta ccttgctcag gtcggcgccc gccctggcga
      121 agcagctgag cggcaccgtc acggtgtgcc ggctgccggg cgcgaaaccc gcgacgaggc
      181 ggccgagatc gacgccgccg cgacagcgtg cgccacaccc cacgaacagg gtcgcggcac
      241 cctgcggtgg ctgcgccacc acggtgtcga actgcatcgc cgcgccggcc ttcgccgcgg
      301 cggacaggtc gcgcggcgcc gcgctgcgcg cgaggaagcg cgccggcgcc agccaggtca
      361 ccgacttcgc atcctgctgg gtgttcacct gcaccgtcgc cacgcgcaac gccgagtgca
      421 cggccggcca ctcggtgacc ccgttgagat cgggccccag ctcgtgcggc gcctgcccgg
      481 cggcctccag gtacaggctg aacggcggca ccgcgagcgt gtggaacacg ccgaccgtgg
      541 cgaccgcacc gcagctcgtc accgacgcct cggtgggcag cctgcccagt tcatgcggct
      601 ggccatagcg cagcccgtag ccgaccggga acagccacgc ggcggcgccc gcatccggcg
      661 catccgggca cggcaccgcc ggccacggca tcgacaaggt gccgcggaaa ttcgcgcgcg
      721 ccgcgccgag cttgcgggcg aacagcacgt cggccacacc cgcgccttcc gagcccggca
      781 gccacgcggc gacgaaggca tccgagcgat tcagcaggtc gttgacgaac aacggacgcc
      841 cggacaggaa cacggtgacc accggcttgt gcgccttggc cacggcgtcg agcacggcga
      901 ggtcttccgg ataacgatcg gtgtggcgca gcgtcgccga ggccgggatg tcgcccatca
      961 tctccgcgta cggcttttcg ccgatcaccg cgacgatggc gtcgaacttc gcggcatcga
     1021 cgccgcgcgc gtcctcgcgg tagctgacgt tgcccgcgcc gtcggcctcg cgcaggccgg
     1081 cgaggatcga ggtcgcatgc gggaaatccg cattcgtgtt gtcggtgccc tgccaggtga
     1141 gcgaccagcc gccggcctgg ttcgacaggc tgtccgcgcc cttgccgacg acgaggatct
     1201 tcgccccggc cttgagcggc agcaccgcgt ggtcgttctt cagcagcacc agcgactcgc
     1261 gcaccgcacg tcgcgcaagg tcgcgatcct ccagcaacgc ggcgtcgccg gcgccggcgc
     1321 gctgcgacgg ccgcttgccg tcgaacaggc ccatgcgcag cttgacctcg atgatgcggg
     1381 tcgccgcgtc atcgatgcgc gcgagtggga tcttgccctc ctgcacttcc cgcatggtgt
     1441 tggcgatgaa cgccttccag tcgtccggca ccatgaacag gtcgatgccg gcgttcaccg
     1501 caagcgggca gtcggcattg ctgcagccgg ggagctggcc gatcgcgttc cagtccgaca
     1561 ccaccaggcc gccgaagccg agcctgtcct tgagcacgcc ggtgaccagc gcctgcgcgc
     1621 cgctgatctt gccgtagtcg acgtgctggc cgagatcgtc ccagctgttg tacgagatca
     1681 tcacgctctg cgcgccggcg cgcagggcac cgtagtagcc ggcaccatgc acgttgatca
     1741 tcgcctcgcg gctgacccgc gactggccct ggtccttgcc ttgccaggtc gagccgtcgc
     1801 cgatgaaatg cttggcggtg gcgatcacgt cgtggtcgcc gaaatccccc tgcaggcctt
     1861 cgacataggc ctgcgcgtac tcgccgacca gcgggcccgc actggaaaaa ctctcgtagg
     1921 tgcgccccca gcgcgcgtcc tgcgccaccg ccacggtggg cgcgaacgcc cattgcacgc
     1981 cggtcgcacg caccgccttc gcggtcgccg cgccgatcgc ccggaccagc gccgggtcgt
     2041 gcgcggcacc gaggccgatg ttgtgcggga acagcgtggc gccgtacacg ttgctgtcgc
     2101 cgtgcaccgc atcggtgccc cagatgaccg ggatcggcgt cggcaggccg gtcgccatcg
     2161 acgcggcgta gtacgcgtcg gcgaggttca gccagtcgtg gatcgatgcg tgcttgtcgc
     2221 cgcccggcca cgagccgccg ccgttcagca ccgagcccaa gtagtacttg cgcacgtctt
     2281 ccggcgtcgc ggtcttgatc tcggcctggg tcatctggcc gatcttctgc gccagcgtca
     2341 tgccggcgac gatcctgcgc gcgcgcgccg cgagtgccgg gtcggccggc agttcactct
     2401 tgatcgccgg ccagtcggtg tagtgcgtcg cggccggacc gcgggtgtcg gtggccgatg
     2461 gcgtcgcggc ccgtgcccag gtttcgccac ccgatgccgc cagggcggca cacgccaacc
     2521 acagccagcg gaaacggaac atggactccc cgcgcacgaa agacacgtcc cgcattctac
     2581 aggcgcaccg cgcgcgtcaa agtcgaggca gcgtcaacac gacggggccg gccgccatcg
     2641 cgaccggccc cgtcgccaac cgcctaccgc gttacttgcc agccggtgcc ggcgctgccg
     2701 ccgataccgg ttcgaggttg aagctcagcg tggtgatctt cgcgtccagc cccttgatga
     2761 cgtctggcgt caggtcgttg gtggtgttgc cgccgagcac cgcgtcacgg ttcaacagca
     2821 ggccgcaatg gtggctgttg tacgccgcct cgaccactgg ctgcgcgtgc tggccgatct
     2881 gctgcatcac cttgccgcgc gtcgcgtcga cgcgctcctc gagatcgtgc acctggccct
     2941 ggaacgcctg catgcgcccc tgcagcgcgc cgccctgctg ctggcgctgt gcttcggtca
     3001 gcgacgcctg cttctgctgg aacgcctgga tgtcggtgtc cagcgccttc ttctggttct
     3061 ccagctgggt ctgctggccc tgcgccagcg acttcagccg cacgcttgcc gcctggccga
     3121 ccttggactg cgcgaacacc gcctcgcgcg agagcaggca caggccgggg atggcattgc
     3181 cgcccagcgg gttggcggcc ggcgccgcct gcgcgaccgc cgttgcggga accacggaaa
     3241 aaccagccgc agcaaccagc gcagcggcca acagcgagtg atgcatcttc atgaatgacg
     3301 tccgagaggt agctccgcgc acccccacgg cacgcggcgt gccgcgagca tacacgcgtg
     3361 cgcctgtctg ggtgatggat ggcgcggcgg atgaccatgc cagcatcccg tcgtgccgac
     3421 gccgcctcag tcgaacagtc gcggctcgcg actctcgtgg tccagcagcc agcgcttgcg
     3481 ggtgaggccg ccggcgtagc cggtcagcga gccgtcgctg cccagcgcgc gatggcaggg
     3541 cacgaacagc gacatcgggt tgcgccccac ggccgcgccg accggatgga acgcgccggg
     3601 gcgtccgatc gcctgtgcca gcgcggcgta cgtcgtggtt tcgccgaacg gcacggcgca
     3661 cagcgccgtc cacaccttgc gctggaactc ggtgccatcc ggcgccagcg gcacctcgaa
     3721 gcgcgtcagc cttcccgcga aatacgcatc gagctcacgc cgggcctcgt ccagcaccgg
     3781 cgtcgacgcc tcgcgccaac ccgcctcggc gctgatcgcg ggaaaatatt tctgtccctc
     3841 gaaccagccg ccggcgaccg cctcatcgcg tgcggccacc acgaatgtgc cgaggggcgt
     3901 ggcgaccggc aggtaggcca gccccatcag ctcgttcatg ccacttgccg tgaccgcatc
     3961 aaccgcactt gctgtagccg cagttgaggc aggtctggca gccgtccatc agcaccagcg
     4021 cctgggtgtt gcacttgctg cacatcgcgg cgccggcggg gaagccggaa ctgccggcgt
     4081 ccgcctcggc atcggcggcc ttcggcgcgg ccgccggttc ggcgtgggcg tgcccggcat
     4141 gcgcggcgtt gctgcgcgcg gcgatcgcct cgtaggcggc acgcttctcg gcgatcagcg
     4201 cgcgctgagc gtcgctcatt tccgggtcgt ggatgaggcc gatgttcttc atgtgctgct
     4261 cgatcacgcc gccgatctcg gcgacgatcg agggcatgta gatgccgccg gccttgaagt
     4321 agccgccgcg cggatcgaac accgccttca gctcctcgac aatgaaggcg acgtcgcccc
     4381 ccttgcggaa caccgcggag aggatgcggg tgagcgcgac gatccactgg aagtggtcca
     4441 tgttcttcga gttgatgaag atctcgaagg ggcggcgcat ctcgtacttg gtgccggcgt
     4501 tgtgcacgat gtcgttgatg gtgacgtaca gcgcgtgctc gaacagcggt gacttgatct
     4561 tgaacgtgga gccgaccagc gtctcgggac gctccaggct ctcgtgcatc tggctgactt
     4621 cggccttggg ttcggccttg gccgccttgg gctcggcggc cggtgctgcc ggcaccgccg
     4681 gcgcctcggg ctggacgacg gcgtaacccg tgatcttctt tgcgatcttg atcgccatga
     4741 tgggagttcc tgatctggcc ggtgccgtac cggcgcggga aaaacacggc cgacccggta
     4801 tgaccgggcc ggccgcttca cgacttgcta cttgcgggca gccttgcggg cgaccggttt
     4861 gcggccggcc acgctgctgc ccttcctgct ggcagtggac cgtttgaccg ccgtcttggc
     4921 gaccttcttc gttgcggccg ccttcttcgg ggcggctttc ctcactgcgg ccttggcggc
     4981 cgtcttcttg ctgctgactt tcttcgcggg cttggcggcg gctctcttca ccaccttgcc
     5041 gggcatcttt ttcaccgctt tcttcgccgc cttgccggct gttgcacgct gcttcgccgg
     5101 ctggcgcacg agcttcttcg gcgctgcttt cttcaccgcc ttgcgcacgc cggccttctt
     5161 tgcagcgacc ttcttcggcg ccggcttgcg gacggccttc gccacggatt tcttgatcgc
     5221 cttcttggcg gcggctttct ttgcggcgac cttcttgacc gccaccttct tcaccgctgc
     5281 tttccttgcc gccgctttcc tggtcgccgc cttcctggcc accggcttct tcgcagcctt
     5341 cgccgccgac ttcttcgtgg cggctgcttt cttcgcgacc ttggccgccg gcttcttcgc
     5401 cacggcggcc ttcttcgccg ccggtttccg cgcggcgggc ttgcgcgcca ccggcttgtt
     5461 tgccgccggt tcgcgggcgg ccgtggccgg cagtgcggtg acgacgaccg gcaccagcac
     5521 cggctccgga tcgaatgccg gctcatcagg cacgacagcg atggtttcga cgacgacctc
     5581 ggtgatcacc ggctcgtcgg gggccggtgg cgtgacgctg gatgacgctt cgacttcgtt
     5641 atcgatggac atgcaggtgt tcccctcgga cggtggccgc gatgcggtcg caggtaggtc
     5701 agaacttgcc gtaatagcct tccttcaggg catcgaacag gttggcggcg gtatgcgtct
     5761 cgccgtcgta ttccacctcc tcgttgccat ggagttccac cacgctaccg tcttcgagtt
     5821 cgaagcggta gagggtgtgc gcaaggtcgg aatccttgac cagcacgccc tggaacgcgg
     5881 ccgggttgaa gcggaacgtg gtgcacccct tgagcccctg cttgtaggcg tagaagtaga
     5941 tgtccttgaa cttttcgtag gggtagtcgg tgggcacgtt cgcggtcttg gagatcgacg
     6001 aatcgaccca tttctgcgcg gccgcctgga tgtccacgtg ctgcttcggg ccgatgtcgt
     6061 cggcggccac gaagtagtcc ggcagcttca ccttggggtc gtccgagtcg ggcatcgcct
     6121 cggcgttgat cagcgcgcgg taggccagca gctcgtagct gtagacgctg atcttttcct
     6181 tggtcttgcg cccctcgcgg atcacgttgc gcgagtagtg gtgggcaaag ctcggctcga
     6241 tgccattgga cgcgttgttg gccagcgaca gcgagatggt gccggtgggc gcgatcgagg
     6301 tgtggtgggt gaagcgcgcg ccggtctcgg ccagctcggc cacgaggttc ggcgccacct
     6361 gcgcgatgcg ctgcatgtag cggctgtact tcgcgtgcag cacacgcccc ggcacgtggt
     6421 cgccgacctt ccagccgtcg cgcgccatct ccggacgctt gcgcagcatg tcgccggtga
     6481 ccgcatagtc ctgcgccagc accggcgccg cacccttctc cttggcgagg tcgagcgcga
     6541 cctcccagcc ggccaccgcc atctcgcgcg acacgtcctc ggtgaaggcg acggcgtcgg
     6601 ccgagccgta gcgcaggcgc agcatcgcca gcgtcgaacc caggccgaga aaacccatgc
     6661 cgtggcggcg cttggaaagg atctccttgc gctgctgttc gagcggcagg ccgttgatgt
     6721 ccaccacgtt gtcgagcagg cgggtgaaca ccttcaccac ctcgcggtac tcgtcccagt
     6781 cgaagcgcgc cttcggcccg aacgggtcgt gcacgaagcg cgtcaggttg accgagccga
     6841 gcaggcacga gccgtacggc ggcaacggct gctcgccgca cgggttggtc gcgcggttgt
     6901 gctcgcacca ccagttgttg ttcatctcgt tgacgcggtc gatcaggatg aacccgggct
     6961 cggcgtagtc gtacgtcgag accatgatca tgtcccacag gtggcgcgcg cggatgtggc
     7021 cgtagatctt gcaggccacc aggccgtcgt cgcgctcgac gtagttctcg tgggtgggcc
     7081 actcgcgcca cacgaccttc gccgggtcgt ccaggtcgag ctcgccctgc tccttgacgt
     7141 gcaccgggaa gatcagcggc caatcctcgt cgtgctccac cgccc
//
LOCUS       DASSVL010000042         2158 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1144995,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000042 DASSVL010000000
VERSION     DASSVL010000042.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2158)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2158)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2158
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1144995"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..925)
                     /gene="glyA"
                     /locus_tag="VFM52_00680"
     CDS             complement(<1..925)
                     /gene="glyA"
                     /locus_tag="VFM52_00680"
                     /EC_number="2.1.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011260263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004372 - glycine hydroxymethyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_function: GO:0070905 - serine binding [Evidence IEA];
                     GO_process: GO:0019264 - glycine biosynthetic process from
                     serine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydroxymethyltransferase"
                     /protein_id="HET8763713.1"
                     /translation="MFPKDCTIAGYDDELAQAIADEGRRQEDHVELIASENYASPRVM
                     EAQGSVLTNKYAEGYPGKRYYGGCEYVDVAEKLAIERLKQLFDCDYANVQPHSGSQAN
                     QAVYLALLQPGDTILGMSLAHGGHLTHGAKVNISGKLFNAVQYGVDENGLIDYDELQR
                     LATEHRPKMLVGGFSAYSQVVDWARMRRIADSVGALFFVDMAHVAGLVAAGVYPSPLP
                     HAHVVTSTTHKTLRGPRGGIIVSRGAGEEIEKKLQSIVFPGIQGGPLMHVIAAKAVAF
                     KEALAPEFRTYQQQIVKNAKALADALLAHGYR"
     gene            1115..>2158
                     /gene="ettA"
                     /locus_tag="VFM52_00685"
     CDS             1115..>2158
                     /gene="ettA"
                     /locus_tag="VFM52_00685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019398294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0045900 - negative regulation of
                     translational elongation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="energy-dependent translational throttle protein
                     EttA"
                     /protein_id="HET8763714.1"
                     /translation="MSSQYIYTMNGVSKIVPPKRQIIKDISLSFFPGAKIGLLGVNGA
                     GKSTVLKIMAGVDTDFQGEARAQPGTKVGYLAQEPNLDPEKTVREVVEEGVAEILDAQ
                     KRLDEVYAAYAEDGADFDALAKEQEKLENILAANDAHALERQLEVAADALRLPPWDAK
                     IGNLSGGEKRRVALCRLLLSKPDMLLLDEPTNHLDAESVDWLEKFLHDYPGTVVAVTH
                     DRYFLDNAAEWILELDRGRGIPWKGNYTEWLEQKDARLKQEANQEKSRQKAIAKELEW
                     VRSAAKGRQSKGKARLARFEELNSVDYQRRNETNEIFIPPGERLGQEVIEFKNVTKSF
                     GDRVLIEDLSFKVP"
BASE COUNT          381 a          703 c          731 g          343 t
ORIGIN      
        1 gccggtagcc gtgcgcgagc agcgcgtccg cgagcgcctt ggcgttcttc acgatctgct
       61 gctggtaggt gcggaactcc ggcgcgagcg cctccttgaa ggcgaccgcc ttggcggcga
      121 tcacgtgcat cagcgggccg ccctggatgc cggggaacac gatcgactgc agcttcttct
      181 cgatctcctc gcccgcgccc ctgctcacga tgatgccgcc gcgcgggccg cgcagggtct
      241 tgtgggtggt cgaggtgacc acgtgcgcgt gcggcagcgg gctcggatag acgccggcgg
      301 cgaccaggcc ggcgacgtgg gccatgtcga cgaagaacag cgcgccgacc gaatcggcga
      361 tccggcgcat gcgcgcccag tcgaccacct gcgagtaggc gctgaagccg ccgaccagca
      421 tcttcggccg gtgttcggtg gccaggcgct gcaactcgtc gtagtcgatc aggccgttct
      481 cgtcgacgcc atactgcacc gcgttgaaca gcttgccgga gatgttgacc ttggcgccgt
      541 gggtgagatg gccgccatgc gcgagcgaca tgcccaggat ggtgtcgccc ggctgcagca
      601 gcgccaggta caccgcctgg ttcgcctgcg aaccggagtg cggctgcacg ttggcgtagt
      661 cgcagtcgaa gagctgcttg agccgctcga tcgccagctt ctcggccacg tccacgtact
      721 cgcagccgcc gtagtagcgc ttgcccggat agccctcggc gtacttgttg gtcagcaccg
      781 agccctgcgc ttccatcacg cgcgggctgg cgtagttctc cgaggcgatc agctcgacgt
      841 gatcttcctg acgccggcct tcgtcggcga tggcctgggc cagttcgtcg tcgtaaccgg
      901 caatcgtgca gtccttgggg aacattctgg cctcggcagt tggcaagcgg gattagccgg
      961 aaagtgtagc gctgccgggc gtttgcggcc accgctgggc ggatccgccc cgcggcatca
     1021 gcacgacccc gcaagccgct ataatgagcg gtttgacgaa ttccctttcc gtgccggccg
     1081 tgcaggcggc gcggcgcacg ccttcggagg ttgcatgagc tcgcagtaca tctacaccat
     1141 gaacggggtc agcaagatcg tcccgccgaa gcgccagatc atcaaggaca tctcgctcag
     1201 cttcttcccc ggcgccaaga tcggcctgct cggcgtcaac ggtgcaggca agtccaccgt
     1261 gctgaagatc atggccggcg tggacaccga cttccagggc gaggcgcgcg cgcagccggg
     1321 caccaaggtc ggctatctgg cgcaggagcc gaacctggat ccggaaaaga ccgtgcgtga
     1381 agtggtcgag gaaggcgtgg ccgaaatcct cgatgcacag aagcgcctcg acgaggtcta
     1441 cgccgcctac gccgaggacg gcgccgactt cgacgcactg gccaaggagc aggagaaact
     1501 cgaaaacatc ctggccgcga acgacgcgca tgcgctggag cgtcagctgg aagtggccgc
     1561 cgacgcgctg cgcctgccgc cgtgggacgc gaagatcggc aacctgtccg gcggcgagaa
     1621 gcgccgcgtg gcgctatgcc gcctgctgct gtccaagccg gacatgctgc tgctggacga
     1681 gccgaccaac catctggatg ccgagtcggt ggactggctg gaaaaattcc tgcacgacta
     1741 ccccggcacc gtggtggcgg tcacccatga ccgctacttc ctggacaacg ccgccgagtg
     1801 gatcctcgaa ctcgaccgcg gccgcggcat tccgtggaag ggcaactaca ccgaatggct
     1861 ggagcagaag gacgctcgcc tgaagcagga agcgaaccag gagaagtcgc gccagaaggc
     1921 gatcgcgaag gagctggagt gggtgcgttc ggccgccaag ggccgccagt ccaagggcaa
     1981 ggcccgcctg gcccgcttcg aggaactgaa ctcggtcgac taccagcgcc gcaacgagac
     2041 caacgagatc ttcattccgc cgggcgagcg cctgggccag gaagtgatcg agttcaagaa
     2101 cgtgaccaag tcgttcggcg accgcgtgct gatcgaggac ctgtcgttca aggtgccg
//
LOCUS       DASSVL010000043         5244 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_481056, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000043 DASSVL010000000
VERSION     DASSVL010000043.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 5244)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5244)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5244
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_481056"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..353)
                     /locus_tag="VFM52_00690"
     CDS             complement(<1..353)
                     /locus_tag="VFM52_00690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015449190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HET8763715.1"
                     /translation="MTPRLAKWVVNGLLLGGALVALFPLVWMLSVSFMPPGTANALPP
                     PLWPAHPTTENYRGLFDHAGMWRYLANSLLVSSAITLLSLACNLLAGYAFAKLRFAGR
                     ERLFRSLLGLLVVPA"
     gene            complement(350..1225)
                     /locus_tag="VFM52_00695"
     CDS             complement(350..1225)
                     /locus_tag="VFM52_00695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HET8763716.1"
                     /translation="MKTRRAAWLFLAPALLVLGVFFLLPVLGALALSFTDYDLYALAD
                     LHHLRFVALGNYWDLLHRPAFWAALGHTFYFVVVGVPLSLAASLGAALLLASPLARCK
                     AFFRTALFAPVVTTAVAMAVVWRYLFNTQYGWANHVLGALGIHPVDWLGDPHWAMPTI
                     ILFAVWKNFGYNMIILLAGLQAIPAELYEAARIDGASPWRQFRHITLPMLGPTLLMVA
                     ILTVSGYFQLFAEPYVMTEGGPLESTTSVLYLMYEDGFKWWNLGTAAAEAFLLFLVMF
                     AATLALLHWPRRSNA"
     gene            complement(1222..2508)
                     /locus_tag="VFM52_00700"
     CDS             complement(1222..2508)
                     /locus_tag="VFM52_00700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019397692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HET8763717.1"
                     /translation="MGTGPTHGGWRSWALLLLAACLAGCGGKPDNRLVFWTFGPEGDA
                     VARLLPAFERAHPDIHVEVQQLPLSAAHQKLLTAIAGGTAPDMAQLGNTWLPEMVALH
                     ALVPLQAQVAASTAVAAPDYFPSLWATNVEQGRLYGIPWYADTRLLFYRTDLLRRAGF
                     DAPPHDWAQWRRMLAALSDPARGVYGILLPTNEYEQLLSLALQQPDPLLRDGGRYGNF
                     ESAGFKRALAFYVDTFRLAQTPRVTNMEVRNPWMEFGRGTYAFYLSGPWNIGEFRRRL
                     PASEQGDWSTAPLPGPNGPGAGLAGGASLVVFRASRQQRAAWALIEFLSQPEVQRQFY
                     RLTGDLPPRRSSWDSPLLRDDAQVQAFRDQLERVKGTPAVPEWERIAEMMQKVAARAV
                     SGGLTVDQATAEMDRRADAILAKRRWLLDRAAAERQ"
     gene            complement(2518..3975)
                     /locus_tag="VFM52_00705"
     CDS             complement(2518..3975)
                     /locus_tag="VFM52_00705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008438749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucoamylase family protein"
                     /protein_id="HET8763718.1"
                     /translation="MDGFWRRTWRVLAMVALVGLAGWQMPLRADSPQPTGYAALPPTQ
                     QAFVADLERRTFDWFWQSADPYTGLVPDSWPNHTFASIAAMGFGLTAYGIGAERGYIT
                     RAQAVQRTLVTLRHLAAAPQDASEDAAAGYHGFFYHFLDMQTGLRDARWVELSSVDTS
                     LLMAGVLFAQSYYDRDTPQERQIRQLADQLYRAVDWPWMQARAPLISMGWTPGGKFIP
                     TDWKGYDEGKLVYLLALGSPTHPVGADAWKAWCSTYPKQWGTFEGYTFLNFGPLFGHQ
                     YTESWVDFRGIRDAWSRAHDLDYFENGRRATLAQRAYAIANPSHWTGYGADVWGLTAS
                     DGPGDVTVGTPQGVRRFSGYMARGAGLAGINDDGTIAPTAAGGSIAFAPDVVVPALMA
                     MKQRYGRYIYDRYGFVDAFNLSFHEAVAGQHSGHVYSGFGWADNQQLGIDQGPILLMI
                     ENWRSGLVWDVMRKNPYVRRGLQRAGFTGGWLESR"
     gene            complement(4070..>5244)
                     /locus_tag="VFM52_00710"
     CDS             complement(4070..>5244)
                     /locus_tag="VFM52_00710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019465716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8763719.1"
                     /translation="SEWQPRVGFSYDINGDEAHVIFGGIGRSYDRNLYESLQVEQTKA
                     SLSQPTLMFDTPAVPCTVGDGNCYAWNPAYLDIATLQGLVQGSSAGKEVDMVNNHLKA
                     PYSDQFSIGMRNRIGEWNTSVALAEIRSHDGLVYTLGNRYPDGSFWHSCGTNCMSQPW
                     GNGIPGFGSLIIGNNGLETRTTQLLVSLDKPYTHESHWGASVAYTWSLAKQNNDNNDP
                     TDQYAFDFETINHSPFTRSGVARNRIVATGTLDGPWGFVFGAKLTLSTAVPDVNLACD
                     GAVGTGVDHGVTNGAGCQSVAIAPPNTGRFLVGGKLWSYRDLDLQATKNFEIYDHLNA
                     YVRLDAINVFNWNNYASFLENWGANGSANPRPVVYNPIGAITGYPRTVKLTMGVNF"
BASE COUNT          847 a         1819 c         1804 g          774 t
ORIGIN      
        1 tgcgccggca ccaccagcag gccgagcagg ctgcggaaca accgctcgcg cccggcgaag
       61 cgcagcttgg cgaaggcgta gccggccagg aggttgcagg ccagcgacag caacgtgatc
      121 gcactggaaa ccagcaggct gttggccagg tagcgccaca tgccggcgtg gtcgaacagg
      181 ccccgatagt tctccgtggt gggatgcgcc ggccacagcg gcggcggcag cgcgttggcg
      241 gtgccgggcg gcatgaacga caccgacagc atccacacca gcgggaacaa ggccaccagc
      301 gcaccgccca gcagcaggcc gttgaccacc cacttcgcca gccgcggcgt catgcgttgc
      361 tccggcgcgg ccagtgcaac aacgccagcg tcgccgcgaa catcaccagg aacagcagga
      421 aggcctcggc cgccgcagtg cccaggttcc accatttgaa gccgtcctcg tacatcaggt
      481 acagcacgct ggtggtgctt tcgagcggcc cgccctcggt catcacgtag ggctcggcga
      541 acagctggaa gtagcccgac acggtgagga tcgccaccat cagcagggtc ggcccgagca
      601 ttggcagcgt gatgtggcgg aactgccgcc acggcgaggc gccgtcgatg cgtgccgcct
      661 cgtaaagttc ggccgggatc gcctgcaggc cggccagcag gatgatcatg ttgtagccaa
      721 agtttttcca caccgcgaac aggatgatgg tgggcatcgc ccagtgcggg tcgcccagcc
      781 agtccaccgg gtggatgccg agcgccccca gcacgtggtt ggcccagccg tactgcgtgt
      841 tgaacaggta ccgccacacc acggccatcg ccaccgcggt ggtcaccacc ggcgcgaaca
      901 gcgcggtgcg gaagaacgcc ttgcagcgcg ccaacggcga ggcgagcagc agcgccgcgc
      961 ccagcgaggc cgccagcgac agcggcacgc ccacgaccac gaaatagaag gtgtgcccca
     1021 gtgcggccca gaacgccggc cgatgcagca ggtcccagta gttgcccagc gcgacgaagc
     1081 gcaggtgatg caggtcggcc agcgcataca ggtcgtagtc ggtgaagctc agtgccagcg
     1141 cgccgagcac cggcagcagg aaaaacacgc cgagcaccag cagcgccggc gcaaggaaca
     1201 gccaggccgc gcgccgggtc ttcattgccg ctccgctgct gcgcggtcga gcagccagcg
     1261 gcgcttggcc aggatcgcgt ccgcacggcg atccatctcg gccgtcgcct ggtccaccgt
     1321 gagcccgcca ctcaccgccc gcgcggcgac cttctgcatc atttcggcaa tgcgctccca
     1381 ctcgggcacg gcaggcgtgc ccttcacccg ttccaactgg tcgcggaagg cttgcacctg
     1441 ggcatcatcg cgcaacagcg ggctgtccca gctgctgcgc cgcggcggca ggtcgccggt
     1501 caatcggtag aactgccgct gcacctcggg ctgcgacagg aactcgatca acgcccaggc
     1561 ggcacgctgc tgccgtgagg cgcggaacac caccaggctg gcaccaccgg caaggccggc
     1621 accgggtcca ttcggcccgg gcagcggcgc cgtcgaccag tcgccctgct cgctcgccgg
     1681 caggcgccgg cggaactcgc cgatgttcca cgggcccgac agatagaacg cgtacgtccc
     1741 gcggccgaac tccatccacg ggttgcggac ctccatgttg gtgacccgcg gcgtctgcgc
     1801 cagccggaag gtatccacgt agaacgccag cgcgcgcttg aaaccggcgc tttcgaaatt
     1861 gccgtagcga ccgccgtcgc gcagcagtgg atcgggctgc tgcagcgcca gcgacagcag
     1921 ctgctcgtat tcgttggtgg gcagcaggat gccgtagacc ccgcgcgccg gatcgctgag
     1981 cgcggccagc atgcgccgcc attgcgccca gtcgtgtggc ggcgcgtcga acccggcgcg
     2041 gcgcaggaga tcggtgcgat agaacaacaa ccgcgtgtcg gcgtaccacg ggatgccgta
     2101 cagccggccc tgctcgacat tggtcgccca caggctgggg aaataatccg gcgccgcgac
     2161 ggcggtggac gccgcgacct gcgcctgcaa cggcaccagc gcatgcagcg ccaccatttc
     2221 cggcagccag gtgttgccga gttgcgccat gtccggcgcg gtgccgccgg caatcgcggt
     2281 gagcagcttc tggtgcgccg cgctcagcgg caactgctgc acctcgacgt ggatgtccgg
     2341 gtgggcgcgt tcgaacgccg gcagcaatcg ggcgacggcg tcgccctcgg ggccgaacgt
     2401 ccagaacacc aggcggttgt ccggcttgcc gccgcaaccg gcaaggcacg ccgcgagcag
     2461 aaggagcgcc cacgaccgcc acccgccgtg cgtcggcccg gtgcccatgc cgcgccctca
     2521 gcgggactcc agccagccgc cggtgaagcc ggcgcgctgc aggccgcggc ggacgtaggg
     2581 gttcttccgc atcacgtccc acaccagccc gctgcgccag ttctcgatca tcagcaggat
     2641 cggcccctgg tcgatgccca gctgctggtt gtcggcccag ccgaagccgg aatagacgtg
     2701 gccgctgtgc tggcccgcca cggcctcgtg gaaactgagg ttgaaggcgt cgacgaagcc
     2761 gtagcggtcg tagatgtacc gcccgtagcg ctgcttcatc gccatcagcg cgggcaccac
     2821 gacgtcgggc gcaaacgcga tggagccgcc tgcggccgtg ggcgcgatgg tgccgtcgtc
     2881 gttgatgccg gccagcccgg cgccgcgcgc catgtacccg ctgaagcggc gcacgccctg
     2941 cggcgtgccc acggtgacgt cgcccgggcc gtcgctggcg gtcaggcccc acacgtcggc
     3001 accgtacccc gtccagtggc tggggttggc gatggcgtag gcgcgttgcg cgagcgtggc
     3061 gcgccggccg ttctcgaagt agtccaggtc atgcgcccgg ctccaggcgt cgcggatgcc
     3121 gcggaaatcc acccacgatt cggtgtactg gtggccgaac agcggcccga agttgaggaa
     3181 ggtgtagccc tcgaacgtgc cccactgctt cgggtaggtc gagcaccacg ccttccacgc
     3241 gtccgcgccg accgggtgcg tgggcgaacc cagcgcgagc aggtagacca gcttgccttc
     3301 gtcgtagccc ttccagtcgg tggggatgaa cttgccgccg ggcgtccagc ccatgctgat
     3361 cagtggcgcg cgtgcctgca tccacggcca gtcgacggcg cggtagagct ggtcggccag
     3421 ctgccggatc tgccgctcct gcggcgtgtc gcggtcgtag tagctctgcg cgaacagcac
     3481 gccggccatc agcagcgagg tgtccacgct ggacagctcg acccaacgcg catcacgcag
     3541 cccggtctgc atgtcgagga agtggtagaa gaaaccgtgg tagcccgcgg cggcgtcctc
     3601 gctggcgtcc tggggcgcgg cggcgagatg gcgcagcgtg accagggtac gctgcaccgc
     3661 ctgcgcccgc gtgatgtagc cgcgctcggc gccgatgcca taggccgtca ggccgaaccc
     3721 catcgcggct atggaagcga aggtgtggtt gggccacgaa tccggcacca ggcccgtgta
     3781 cgggtccgcg ctttgccaga accagtcgaa ggtgcgccgc tccaggtcgg cgacgaaggc
     3841 ctgctgcgtc ggcggcaatg ccgcatagcc ggttggctgc ggcgaatccg cccgcagcgg
     3901 catctgccag ccggccaggc cgaccagcgc caccattgcc agcacgcgcc aggtgcgccg
     3961 ccagaacccg tccatcgcta ctcccgtgca gccggggcgg cgcccggccg ctgccgtcgc
     4021 gtggcccggg cacgaccggc gccgggccac gcgggtgaca cgatccgcgt cagaagttca
     4081 cgcccatggt gagcttcacc gtccgcggat aacccgtgat cgcgccgatg gggttgtaga
     4141 ccaccggccg cgggttggcg ctgccgttcg cgccccagtt ctccaggaag ctggcgtagt
     4201 tgttccagtt gaacacgttg atcgcgtcca ggcgcacgta cgcgttcagg tggtcgtaga
     4261 tctcgaaatt cttggtggcc tgcaggtcga gatcgcggta cgaccacaac ttgccgccga
     4321 ccaggaagcg cccggtgttc ggcggcgcta tggccaccga ctggcagccc gcgccattgg
     4381 tgacgccatg gtcgacgccg gtgccgaccg cgccgtcgca ggccaggttg acgtccggca
     4441 ccgcggtgga cagggtcagc ttggcgccga acacgaaccc ccacgggcca tccagcgtgc
     4501 cggtcgccac gatgcggttg cgcgccacgc ccgaacgggt gaacggggag tggttgatcg
     4561 tctcgaagtc gaacgcgtac tggtcggtgg ggtcgttgtt gtcgttgttc tgcttggcga
     4621 gcgaccacgt gtacgccacc gacgcgcccc agtgcgattc atgcgtgtac ggcttgtcca
     4681 gcgataccag caactgcgtg gtgcgcgttt ccaggccgtt gttgccgatg atcaggctgc
     4741 cgaaaccggg gatgccgttg ccccacggct ggctcatgca gttggtgccg cagctgtgcc
     4801 agaacgagcc atccgggtag cggttgccca gcgtgtagac caggccgtcg tggctgcgga
     4861 tttccgccag cgccacgctg gtgttccact cgccgatgcg gttgcgcatg ccgatgctga
     4921 actggtccga gtacggcgcc ttgaggtggt tgttgaccat gtcgacttcc ttgccggcgc
     4981 tgctgccctg caccaggccc tgcagcgtgg cgatgtcgag gtaggcggga ttccacgcat
     5041 agcaattgcc gtcgccgacc gtgcacggca ccgccggcgt gtcgaacatg agcgtcggct
     5101 gcgacagcga cgccttggtc tgctccacct gcagcgactc gtacaggttg cggtcgtagg
     5161 agcggccgat gccgccgaag atcacgtgcg cctcgtcgcc gttgatgtcg taggagaagc
     5221 ccacgcgcgg ctgccattcg ctct
//
LOCUS       DASSVL010000044         2259 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1385141,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000044 DASSVL010000000
VERSION     DASSVL010000044.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2259)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2259)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2259
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1385141"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..507
                     /gene="folE"
                     /locus_tag="VFM52_00715"
     CDS             <1..507
                     /gene="folE"
                     /locus_tag="VFM52_00715"
                     /EC_number="3.5.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015446586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003934 - GTP cyclohydrolase I activity
                     [Evidence IEA];
                     GO_process: GO:0042559 - pteridine-containing compound
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0046654 - tetrahydrofolate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase I FolE"
                     /protein_id="HET8763720.1"
                     /translation="GLLDTPARVARAYRDWFSGYDEDPAEFLLRTFKEVDGYDEMVVL
                     RDIEFESHCEHHLAPIIGRAHVGYLPTNRVVGISKLARVVDGFARRLQVQEKLTAQIA
                     QCIQDTLQPAGVAVVIDATHGCMTTRGVHKTGVSMITSHMLGAFRNDARTRAEFLEFI
                     GLHGSMRR"
     gene            504..833
                     /locus_tag="VFM52_00720"
     CDS             504..833
                     /locus_tag="VFM52_00720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017463084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8763721.1"
                     /translation="MRAAVVAAALALLPLAAAAQDTRDAYLRQFDTDGNGCVSEAEYV
                     AHMSLGFDRLDANHDGVLEATELPGGRGKPVTRAQWQADLRRQFRRLDRRRTGCLGAQ
                     ELTAPPG"
     gene            912..2204
                     /locus_tag="VFM52_00725"
     CDS             912..2204
                     /locus_tag="VFM52_00725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007081562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TCR/Tet family MFS transporter"
                     /protein_id="HET8763722.1"
                     /translation="MNEPAIPASRHRAALAFIFVTVTLDMLAFGIIIPVLPHLVVELT
                     GGGLANAAMWVGVISTLFMLMQFLFSPVQGALSDRYGRRAVILVSSFGLGVDFIVMAL
                     APVMWLLLIGRAVSGICSASFSTANAYIADVVPHEKRAAAFGMLGAAFSIGFVLGPAL
                     GGVLGHWDLRAPFWAAAGLALANFAYGWIVLPESLPKERRTPRIAWRDANPLGAIMLL
                     RRYPQVFGLAVVFFLINLAQFSLNSTYVLYADYRFGWGPRTVGYALALLGVCAGLVQG
                     GLVRRLMPKLGERRMIVAGLVLCVAGYLLFGLVGSVALFVLAIPVFSLGGLAGPPAHS
                     LMTHQVDPHEQGRLQGALSSLRGLAGIVGPVLFADLFALFISNHAPVPHLPGAAFLLA
                     AVLTALSVWVALRATRARATDNGGSNQDSSHDSMEQTS"
BASE COUNT          296 a          805 c          749 g          409 t
ORIGIN      
        1 ggcctgctgg acactccggc gcgcgtcgcg cgcgcctatc gcgactggtt ctccggctac
       61 gacgaggatc cggccgaatt cctgctgcgc accttcaagg aagtggacgg ctacgacgag
      121 atggtggtgc tgcgcgacat cgagttcgaa agccactgcg agcaccatct cgcgccgatc
      181 atcggccgcg cccatgtcgg ctatttgccg accaaccgcg tcgtcggcat ctccaagctc
      241 gcgcgcgtgg tcgacggctt cgcgcgccgc ctgcaggtgc aggagaaact caccgcgcag
      301 atcgcgcagt gcatccagga cacgctgcag cccgccggcg tcgcggtggt gatcgacgcg
      361 acgcacggct gcatgaccac ccgcggcgtg cacaagaccg gggtgtcgat gatcaccagc
      421 cacatgctcg gcgcattccg caacgatgcg cgcacgcgcg ccgagttcct cgaattcatc
      481 ggcctgcacg gcagcatgcg gcggtgaggg cggccgtggt cgccgcggcg ctggcgttgc
      541 tgccgctggc ggcggccgcc caggacaccc gcgacgccta tctgcgccag ttcgacaccg
      601 acggcaacgg ctgcgtcagc gaggccgaat acgtggcgca catgagcctc ggcttcgatc
      661 gcctcgacgc caaccatgac ggcgtgctgg aagcgacgga actgcccggc ggccgcggca
      721 agccggtgac ccgcgcgcaa tggcaagccg atctgcgccg ccagttccgc cgtctcgacc
      781 gccgccgcac cggctgcctc ggcgcgcaag aactcacggc cccgccgggc tgaccggcgc
      841 atttcgccac gggccagccg cacggcacgg cgctgcgtta tcgttattca ttcgccgtcg
      901 tttccgcctg catgaacgag cccgccatcc ccgcgtcgcg ccatcgcgcc gcgctcgcct
      961 tcatcttcgt cactgtcacg ctggacatgc tggcgttcgg catcatcatc ccggtgctgc
     1021 cgcacctggt ggtggagctg accggcggcg ggctggccaa tgccgcgatg tgggtcggcg
     1081 tcatcagcac gctgttcatg ctgatgcagt ttctgttctc gccagtgcag ggtgcgttgt
     1141 cggatcgcta cggccggcgc gcggtgatcc tggtgtcgag cttcggcctg ggcgtggatt
     1201 tcatcgtgat ggcgctggcg ccggtgatgt ggctgctgct gatcggccgc gccgtgtcgg
     1261 gcatctgctc ggcaagtttc tccaccgcca acgcgtacat cgccgacgtg gtgccgcacg
     1321 agaaacgcgc ggcggcgttc ggcatgctcg gcgccgcctt cagcatcggc ttcgtgctcg
     1381 gcccggcact cggcggcgtg ctcggccact gggatctgcg cgcgccgttc tgggcggcgg
     1441 ccgggctggc gctggcgaat ttcgcctacg gctggatcgt gctgcccgaa tcgctgccga
     1501 aggagcgccg cacgccgcgc atcgcctggc gtgacgcgaa cccgctcggc gcgatcatgc
     1561 tgctgcgccg ctacccgcag gtgttcggcc tggcggtcgt gttctttctc atcaacctcg
     1621 cgcagttctc gctcaactcc acctacgtgc tgtacgccga ctaccgcttc ggctggggcc
     1681 cacggaccgt gggttacgcc ctggcactgc tcggcgtgtg cgccggcctg gtgcagggcg
     1741 ggctggtgcg ccggctgatg ccgaagctcg gcgagcggcg catgatcgtc gccggtctcg
     1801 tgctgtgcgt cgccggctac ctgctgttcg ggctggtcgg ctcggtggcg ctgttcgtgc
     1861 ttgccattcc ggtattcagc ctcggtggcc tcgccggccc gccggcacac tcgctgatga
     1921 cccaccaggt cgacccgcac gaacagggcc gcctgcaggg cgcgctgtcc agcctgcgcg
     1981 ggctcgccgg catcgtcggc ccggtgctgt ttgccgacct cttcgcgctg ttcatcagca
     2041 atcacgcacc cgtgccgcac ctgcccggcg cggcattcct gctggctgcc gtgctgactg
     2101 ccttgtcggt atgggtcgcg ctgcgtgcga cgcgggcacg cgcgaccgac aatggcggca
     2161 gcaatcagga ttcttcccac gactccatgg agcaaacatc atgagtcttt ccatgcatca
     2221 atcttccatt accgttttcg cgcgcgcgct cggcaacct
//
LOCUS       DASSVL010000045         6108 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_481114, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000045 DASSVL010000000
VERSION     DASSVL010000045.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 6108)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6108)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6108
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_481114"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..338)
                     /locus_tag="VFM52_00730"
     CDS             complement(<1..338)
                     /locus_tag="VFM52_00730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015446711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HET8763723.1"
                     /translation="MVAMATEHVIDVQHWNDTLFSFRTTRDAGFRFDSGQFVMIGLEA
                     DGRPLLRAYSIASASWQEHLEFFSIKVPDGPLTSRLQHVRPGDELLVSRKPTGTLVLS
                     DLRAGVRLYLL"
     gene            505..1491
                     /gene="dusA"
                     /locus_tag="VFM52_00735"
     CDS             505..1491
                     /gene="dusA"
                     /locus_tag="VFM52_00735"
                     /EC_number="1.3.1.-"
                     /EC_number="1.3.1.91"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008437953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0017150 - tRNA dihydrouridine synthase
                     activity [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0002943 - tRNA dihydrouridine synthesis
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dihydrouridine(20/20a) synthase DusA"
                     /protein_id="HET8763724.1"
                     /translation="MKTPSMPVAASWRLSVAPMMDWTDRHCRYFHRLLAPHARLYTEM
                     VTSAALVRGGALRLLAHDPAEHPLALQLGGSEPAELAAAARLGAQAGCDEVNLNVGCP
                     SDRVQSGRFGACLMREPALVADCVKAMQDAVEVPVTVKCRIGVDDQDEYADLQRFTAT
                     MVDAGVRVLIVHARKAWLKGLSPKENREVPPLDYPRVHRLKQDFPALVVAINGGLTTL
                     AQVRAELDHVDGVMLGRAAYHDPYLLAQLDHALYGTPLPSREEVLARLRPYIEAELAR
                     GTALKHITRHLLGLYQGEPGARGFRRRLSEESHLAGADWALIESALPLAAAA"
     gene            1574..1900
                     /locus_tag="VFM52_00740"
     CDS             1574..1900
                     /locus_tag="VFM52_00740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007080460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8763725.1"
                     /translation="MQARCSTPWLLALLLALGTAPAWAQSQSKPGELSLGDAVTRVQQ
                     ETSGQVLSAESRRWDRRTEYRIKVLTPEGHVRVMTVPASGNGARTGSPSTRNPPARRP
                     GGKEKP"
     gene            1902..2594
                     /locus_tag="VFM52_00745"
     CDS             1902..2594
                     /locus_tag="VFM52_00745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008437950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HET8763726.1"
                     /translation="MRILLVEDEAPLRETLAARLKRDGFAVDAAQDGEEALYLGREVP
                     FDLAIIDLGLPKMSGMELIKALRENGQRYPVLILTARGGWQDKVEGLKQGADDYLVKP
                     FHVEELLARINALVRRASGWSKPILACGPIKLDTTAQTVTVEAKSVDLTSYEYKVLEY
                     LMLHAGELVSKADLTEHIYQQDFDRDSNVLEVFIGRLRRKLDPEGALKPIETVRGRGY
                     RFAIPRTDNDDE"
     gene            2560..3969
                     /locus_tag="VFM52_00750"
     CDS             2560..3969
                     /locus_tag="VFM52_00750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014403796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HET8763727.1"
                     /translation="MPSPAPTTTTSEPAPRRPLSLAARSAITSGLVLAAFLGLVGVVM
                     AVAKKQSTLNNLHDRLQDAAVTDIITHTDANRDGRLLPPDSPPQKFSQPGSGLYAVIL
                     GPNDFRWESTSAIGHDFRFLTPLTPGQRKFEGPVDTRMGRLYYFAMGVAFDYPGHKST
                     PATVMVAQNEQQFEGENAVYRRTLALWLSILGVLLIALQIVLLRWSLRPLRKVASDLS
                     RVEHGDSDHLDSQYPRELTGLTQRINGFIDSEREQRARYRHTLADLAHSLKTPLAVIR
                     SQLESAEQNPVRRGVLDQVQRMNDLVAYQLARAATSGRQTFATAVPIASHAEDLVRML
                     EKVYATKNVLCEFDIQEGASFYGELNDLLELMGNLLENAFKWTRHHVFLVVKVPPAAG
                     HTHPGLQLSVEDDGPGIANDKVETVLQRGVRGDERVQGHGIGLSIVQDIVKAYRGELV
                     VDRSPDFGGARFNVSLPAE"
     gene            complement(4003..4350)
                     /locus_tag="VFM52_00755"
     CDS             complement(4003..4350)
                     /locus_tag="VFM52_00755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8763728.1"
                     /translation="MSVRQWMVASVLVLAGIGSAVATDLDAHEVATGSRGAAESSTRD
                     SGGTTGGDLLGLGRDTSSRRSADGDNDADGGSNRGGGSAAGGSEHGGRISAPTSARPA
                     PLGWQSLLPGSIQ"
     gene            4576..5565
                     /locus_tag="VFM52_00760"
     CDS             4576..5565
                     /locus_tag="VFM52_00760"
                     /EC_number="6.3.4.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015446740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004077 - biotin-[acetyl-CoA-carboxylase]
                     ligase activity [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biotin--[acetyl-CoA-carboxylase] ligase"
                     /protein_id="HET8763729.1"
                     /translation="MQPAELLAELATGEPRSGVELAARAGLTRAAVWKQIEALRARGV
                     PIEANGSAGYRLPWPVQLLDGKHIRTALPAAILAKLGALEVHWELDSTSSERQRRRET
                     AADLSVILSESQSAGRGRRGRHWLSPPGLNLYLSCLKRFDAGFAALSGLSLAIGVVVV
                     RALDALGARDVGLKWPNDVLATAHGQPAGKLAGILVELNGEYLGPCVAIIGIGLNLRL
                     TDALRAQLDQPACDLAGLTGGTPPDRNRVAATLIAALVEGLAQFERKGFAAFAAEYAR
                     HDLLRGRALRLTGASGPRTGTGAGVDERGALLLQRPDGSLQHVDSADVTVRRA"
     gene            5562..5825
                     /locus_tag="VFM52_00765"
     CDS             5562..5825
                     /locus_tag="VFM52_00765"
                     /EC_number="2.7.1.33"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0004594 - pantothenate kinase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type III pantothenate kinase"
                     /protein_id="HET8763730.1"
                     /translation="MNLLLDLGNTRLKWALADGRHWHAHGAIGWQEDVAAGLAHEWSS
                     LPAPSAAFGASVVDAPREALVAASVKVSPAAHSRAAMWPSSQA"
     gene            5804..>6108
                     /locus_tag="VFM52_00770"
     CDS             5804..>6108
                     /locus_tag="VFM52_00770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8763731.1"
                     /translation="MAVQPGVGGFQHGTCLVDTVRIAIGFGAQLVVYELLLRPRNVVV
                     EEAVEHAHIDGGIGVGGNQSLWPRTMGIEVFDDAGGLHDLAVAVHQQRKFPDRPAPR"
BASE COUNT          961 a         2192 c         2072 g          883 t
ORIGIN      
        1 agcagataga gccgtactcc cgctcgcaga tccgacagca caagtgtgcc ggtcggcttg
       61 cggctcacga gcagctcatc acccgggcgc acgtgttgca gccgcgaggt gagcggcccg
      121 tccggcacct tgatcgagaa aaactccaga tgctcctgcc agctcgcgct ggcgatcgaa
      181 tacgcgcgca gcagcggccg cccatcggct tccaggccga tcatcacgaa ctgcccgctg
      241 tcgaagcgga agcccgcgtc gcgcgtggtg cggaacgaga acagcgtgtc gttccagtgc
      301 tgcacgtcga tcacgtgctc ggtggccatc gctaccatga atgtcgtcgt ctcgaaccgt
      361 ggcgtgccga agcgccgccc atcggcaccc gtcgcatgct gcaattgcag cattttacgc
      421 gatccgcgcg cgccacgccg gcgcctgaac ggccgcggcc gggccgctgt atccgctgcc
      481 gcaatgcggg acaatagcgg cctgatgaag acgccttcca tgccggttgc cgcatcatgg
      541 cgcctgtcgg ttgccccgat gatggactgg accgaccgcc actgccgcta cttccaccgc
      601 ctgctcgcgc cgcacgcgcg cctgtacacc gagatggtga ccagcgccgc actggtgcgc
      661 ggcggggcgt tgcgcctgct cgcccacgac ccggccgaac acccgctcgc gctgcagctg
      721 ggcggcagcg aaccggccga actggcggcg gcggcgcggc tgggcgcaca ggccggctgt
      781 gacgaggtga atctcaacgt cggttgtccg tccgaccgcg tgcaatccgg ccgcttcggc
      841 gcctgcctga tgcgcgagcc ggcgctggtc gccgattgcg tcaaggccat gcaggacgcg
      901 gtcgaggtgc cggtcacggt gaaatgccgg atcggcgtgg acgaccagga tgaatacgcc
      961 gacctgcagc gcttcaccgc aaccatggtc gacgccggtg tgcgggtgtt gatcgtgcac
     1021 gcgcgcaagg cctggctgaa gggcctgtcg cccaaggaga accgcgaggt gccgccgctc
     1081 gactatccgc gcgtgcaccg actcaagcag gatttccccg cgctggtggt ggcgatcaac
     1141 ggcggcctca ccacgctggc gcaggtgcgc gccgagctgg atcacgtgga cggcgtgatg
     1201 ctcggccgcg ccgcgtatca cgacccgtac ctgctggcgc agctcgacca tgcgctctac
     1261 ggcacgccgc tgccgagccg cgaggaagtc ctggcgcgcc tgcgccccta catcgaggcc
     1321 gaactcgcgc gcggcaccgc gctcaagcac atcacccgcc acctgctcgg cctgtaccag
     1381 ggcgagcccg gcgcgcgcgg tttccgccgc cggctgagcg aggagtccca ccttgccggc
     1441 gccgactggg cactgatcga aagcgccctg ccgctggcgg cggccgcgtg acagtgcgcg
     1501 cgcgtccggt cactattcag tttcatcgtt caaactgaac gcatcacgat taccgacgat
     1561 ccagacctcg ttcatgcagg cacgttgctc aaccccctgg ctgctggcgc tgctgctcgc
     1621 actcggcacc gcaccggcat gggcccagtc acaatccaag ccgggcgagc tgagcctcgg
     1681 cgacgcggtg acgcgcgtgc agcaggagac cagtggccag gtgctgtccg ccgaatcgcg
     1741 ccgctgggac cggcgcaccg aataccgcat caaggtgctc acgcccgaag gccacgtccg
     1801 cgtgatgacc gtgccggcct ccggcaacgg cgcgcgcacc ggctccccgt caacccgcaa
     1861 cccgccggcc cggcgtccgg gcggcaagga gaaaccctga catgcgcatc cttttggtgg
     1921 aagacgaggc gccgctgcgc gagacgctgg cggcgcggct gaaacgcgac ggcttcgcgg
     1981 tcgatgccgc gcaggacggc gaagaggcgc tctacctcgg ccgcgaggtg ccgttcgacc
     2041 tcgccatcat cgacctcggc ctgccgaaga tgtccggcat ggagctgatc aaggcattgc
     2101 gcgagaacgg ccagcgctac ccggtgctga tcctcaccgc gcgcggcggc tggcaggaca
     2161 aggtcgaggg cctgaagcag ggcgccgacg actacctggt caagccgttc cacgtcgagg
     2221 agctgctggc gcggatcaat gcgctggtcc ggcgcgccag cggctggtcc aagccgatcc
     2281 tcgcctgcgg gccgatcaag ctcgacacca cggcgcagac ggtcaccgtc gaagccaagt
     2341 cggtcgacct caccagctac gagtacaagg tgctcgaata cctgatgctg catgccggcg
     2401 agctggtgtc caaggccgac ctcaccgagc acatctacca gcaggatttc gaccgcgatt
     2461 cgaacgtgct ggaggtgttc atcggccgcc tgcgccgcaa gctcgacccg gaaggcgcct
     2521 tgaagcccat cgagaccgtg cgtggacgcg gataccgctt tgccatcccc cgcaccgaca
     2581 acgacgacga gtgaacccgc gccgcgccgc ccgctgtcgc tggcggcgcg ctcggccatc
     2641 acctcgggtc tggtgctggc ggcgttcctc ggcctcgtcg gcgtggtgat ggcggtcgcc
     2701 aagaagcaga gcacgctgaa caacctgcac gaccggctgc aggacgccgc ggtcaccgac
     2761 atcatcaccc acaccgacgc caaccgcgac gggcgcctgc tgccgcccga ttcgccgccg
     2821 cagaagttct cgcaacccgg ttcggggctg tatgcggtga tcctcgggcc gaacgatttc
     2881 cgctgggaat cgaccagcgc gatcggccac gacttccgct tcctcacccc cctcacgccg
     2941 ggccagcgca agttcgaagg cccggtcgac acgcgcatgg ggcgcctgta ctactttgcg
     3001 atgggggtgg cgttcgacta ccccggccac aagtcgacgc cggccacggt gatggtggcg
     3061 cagaacgagc agcagttcga gggcgagaac gcggtatacc ggcgcacgct ggcgctgtgg
     3121 ctgtcgatac tcggcgtgct gttgatcgcc ctgcagatcg tgctgttgcg ctggagcctg
     3181 cgcccgctgc gcaaggtcgc cagcgacctc tcccgcgtcg agcacggcga cagcgaccac
     3241 ctcgacagcc agtatccgcg cgagctgacc ggcctcaccc agcgcatcaa cggcttcatc
     3301 gacagcgagc gcgagcagcg cgcacgctat cgccacaccc tggccgacct cgcgcacagc
     3361 ctgaagacgc cgctggcggt gatccgttcg cagctcgaat cggccgaaca gaacccggtg
     3421 cggcgcggcg tgctcgacca ggtgcagcgc atgaacgacc tggttgccta ccagctcgca
     3481 cgcgcggcca cgtcgggccg ccagaccttc gccaccgcgg tgccgatcgc cagccacgcc
     3541 gaggacctgg tgcgcatgct ggaaaaggtc tacgcgacga aaaacgtgct gtgcgagttc
     3601 gacatccagg agggtgcgag cttctacggc gaactcaacg acctgctcga actgatgggc
     3661 aacctgctcg agaacgcgtt caagtggacc cgccaccacg tgttcctcgt ggtcaaggtg
     3721 ccgccggccg ccggccatac ccatcccggc ctgcagctca gcgtcgagga cgacggcccc
     3781 ggcatcgcca atgacaaggt ggagacggtg ctgcagcgcg gcgtgcgcgg cgacgagcgc
     3841 gtgcagggcc acggcatcgg gctgtccatc gtgcaggaca tcgtcaaggc gtaccgcggc
     3901 gagctggtgg tggatcgctc gccggatttc ggcggcgccc gcttcaacgt cagcctgccg
     3961 gcggaatagg cgccagccgg ccggcggggc gcggccgcgg gattactgga tcgatcccgg
     4021 cagcagcgac tgccagccga gcggtgccgg gcgcgcactg gtcggcgccg agatgcggcc
     4081 accgtgctcg ctgccgccgg ccgcgctgcc accgccgcga ttgctgccgc cgtcggcgtc
     4141 gttgtcaccg tcggcgctgc ggcgcgacga agtatcgcgg ccgaggccga gcaggtcgcc
     4201 gcccgtcgtg ccgccggagt cgcgggtgct gctttccgcc gcaccgcggc tgcccgtcgc
     4261 cacctcgtgg gcatccagat ccgtcgccac cgcactgccg atgccggcca ggacgagcac
     4321 gctcgcgacc atccactgtc tgacactcat ggcatgcaac cccttgatcc acaagcgagg
     4381 cttggcatgg tggcagaaac ctgtgcgcga tgccagtggc cgcacggcgg ccacggccgg
     4441 tggctgcatg gcgcagtggc cggccgcgcc gggacgaatc cgcaccggcg ccggtagaat
     4501 gccaaggatg cgcccgatga ttgccctgca ggtccgccgc ccgtccaccg cctccgcgtc
     4561 cggggttgcg gcctgatgca gccggccgag ctgctggcgg aactggccac cggcgagccc
     4621 cgctccgggg tggagctggc tgcccgcgcc gggctcacgc gcgccgcggt gtggaagcag
     4681 atcgaagcgc tgcgcgcccg cggagtgccg atcgaagcca acggcagtgc cggctaccgc
     4741 ctgccgtggc cggtacaatt gctcgacggc aagcacatcc gcaccgcgct gccggccgcc
     4801 atcctcgcga aactcggcgc ccttgaagtg cactgggagc tggattccac ctccagcgaa
     4861 cggcagcgcc gccgcgagac ggccgccgat ctcagcgtga tcctcagcga aagccaaagc
     4921 gccggccgcg gccgccgggg ccggcactgg ctgtcgccgc cggggctgaa cctctacctg
     4981 tcgtgcctca agcggttcga cgccggcttt gccgcgctgt ccgggctgtc gctggcgatc
     5041 ggcgtggtcg tggtgcgcgc gctggacgcg ctgggtgcgc gcgacgtcgg cctcaaatgg
     5101 ccgaacgacg tgctggcgac cgcgcatggg caacccgccg gcaagctcgc aggcatcctc
     5161 gtcgaactca atggcgaata cctcgggccg tgcgtcgcga tcatcggcat cggcctcaac
     5221 ctgcggctga ccgacgcctt gcgcgcgcag ctcgaccagc cagcgtgcga cctcgccggc
     5281 ctgaccggcg gcacgccgcc cgaccgcaac cgcgtcgccg ccacgctgat cgccgccttg
     5341 gtcgaaggcc tcgcgcaatt cgagcgcaag gggttcgccg cgttcgccgc cgagtacgca
     5401 cgccacgacc tgctgcgtgg ccgggcgctg cgcctgaccg gcgccagcgg cccgcgcacc
     5461 ggtaccgggg ctggcgtgga cgagcgcggc gccctgctgc tgcagcgccc ggacggctcg
     5521 ctgcagcacg tggacagtgc cgacgtgacg gtgcgtcgcg catgaacctg ctgctggacc
     5581 tgggcaacac gcggctgaaa tgggcgctgg ccgacggtcg gcactggcac gcacacggcg
     5641 ccatcggctg gcaggaagac gtggccgccg gcctcgcaca cgaatggtcg tcgctgccgg
     5701 cgccgagcgc ggcgttcggt gcctccgtcg tagatgcccc gcgcgaggcg ctggtggcgg
     5761 ccagcgtgaa ggtatcgccc gcggcccatt cgcgcgcggc catgtggccg tccagccagg
     5821 cgtaggcggt ttccagcatg gcacgtgcct cgtcgacacc gtacggatcg cgatcggatt
     5881 cggggcgcaa ctggtcgtat acgaacttct gctgcggcct cgaaatgtag ttgtcgaaga
     5941 agcggtcgag catgcgcaca tcgacggcgg catcggcgtc ggcgggaatc aatcgctctg
     6001 gccccgcacg atgggcatcg aggtattcga tgatgctggt ggcctccatg acctggcggt
     6061 cgccgtccac cagcagcgga aatttccgga tcggccagcg ccgcgcga
//
LOCUS       DASSVL010000046         2010 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1258088,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000046 DASSVL010000000
VERSION     DASSVL010000046.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2010)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2010)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2010
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1258088"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1609
                     /gene="recG"
                     /locus_tag="VFM52_00775"
     CDS             <1..1609
                     /gene="recG"
                     /locus_tag="VFM52_00775"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007509517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-dependent DNA helicase RecG"
                     /protein_id="HET8763732.1"
                     /translation="KRLAGVIAKALALLPDEAALELIPAELRAAHGLTSLREALLAVH
                     RPPPDVRLELLQQGRHGAQQRLAFEELLTQHLSLKRMRAAVQRRGAPPLHGEGRLRRE
                     LLAVLPFALTAAQQRVEAEVRRDLAQSSPMLRLVQGDVGSGKTVVAALAALAAVESGR
                     QVALVAPTELLAEQHLRNFRHWLAPLGIDVEWLAGKQQGKARQAAMQRVANGAPVTIG
                     THALMQEGVAFARLGLVIVDEQHRFGVQQRLALHDKGADLAHGSVPHQLVLTATPIPR
                     TLAMSAYADLDVSVIDELPPGRTPVQTVAVSNARRAEVIERIRVACGEGRQAYWVCTL
                     IEESEQLRAQAAEVAHAELVAALPDCRVGLIHGRLKPKEKQAVMDAFQAGELAVLVAT
                     TVIEVGVDVPNASLMVIENAERLGLAQLHQLRGRVGRGAIASNCVLLYQPPLGQLARE
                     RLEVMRETCDGFRIAEKDLELRGPGEVLGTRQTGQLSFRIADITRDAHLLPAVQRVGE
                     RLLADHPHAADRLIARWIGGAARFARA"
BASE COUNT          278 a          687 c          726 g          319 t
ORIGIN      
        1 gaagcgcctg gccggcgtga tcgccaaggc gctggcgctg ttgcctgacg aggcggcgct
       61 ggagctgatc ccggccgaac tgcgtgccgc acatggcctc acctcgctgc gcgaggcgct
      121 gctcgcggtg catcggccac cgcccgacgt acggctggag ctgctgcagc aaggccgcca
      181 cggtgcgcag cagcgcctcg ccttcgagga gctgctcacc cagcacctga gcctgaagcg
      241 catgcgcgcg gccgtgcagc ggcgaggcgc gccgccgctg cacggcgaag gccgcctgcg
      301 acgggagctg ctcgccgtgc tgccctttgc gctcaccgcc gcgcagcagc gggtggaggc
      361 ggaggtgcgc cgcgatctcg cgcagtccag cccgatgctg cggctggtgc aaggcgacgt
      421 gggctcgggc aagaccgtgg tggccgcgct ggccgcgctg gccgcggtgg agtccggtcg
      481 ccaggtggcg ctggtggcgc cgaccgagtt gctggccgaa cagcacctgc gcaatttccg
      541 ccactggctt gccccgcttg gcatcgatgt cgagtggctg gccggcaagc agcagggcaa
      601 ggcgcgccag gccgcgatgc agcgggtcgc gaacggcgcg ccggtcacca tcggcacgca
      661 tgcgctgatg caggaaggcg tcgccttcgc ccggctcggc ctggtcatcg tcgacgagca
      721 acaccgcttc ggcgtgcagc agcggctggc gctgcacgac aagggcgccg acctcgcgca
      781 tggcagcgtg ccgcaccagc tggtgctcac cgccacgccg atcccgcgca cgctggctat
      841 gagcgcgtac gccgatctcg acgtgtcggt gatcgacgag ctgccgccag ggcgcacgcc
      901 ggtgcagacg gtggcggtgt ccaacgcgcg ccgggccgag gtgatcgagc gcatccgtgt
      961 cgcctgcggc gagggccggc aggcgtactg ggtgtgcacg ttgatcgagg aatccgaaca
     1021 gttgcgcgcg caggctgccg aggtcgcgca tgccgagctg gttgcggcgt tgcccgactg
     1081 ccgggtcggc ctgattcacg ggcggttgaa gccgaaggag aagcaggcgg tgatggatgc
     1141 gttccaggcc ggcgaactcg cggtactggt cgccaccacg gtgatcgagg tcggtgtcga
     1201 cgtccccaac gccagcctga tggtgatcga gaacgcggag cggctcggcc tggcgcagtt
     1261 gcaccagctg cgtggccgcg tcgggcgtgg cgcgatcgcg tccaactgcg tgttgctgta
     1321 ccagccgccg ctggggcagc tggcgcgcga acggcttgaa gtgatgcgcg aaacctgcga
     1381 tgggttccgc atcgccgaga aggatctcga actgcgcggc cccggcgagg tgctgggcac
     1441 tcgccagacc gggcaactca gcttccgcat tgccgacatc acccgcgatg cccacttgtt
     1501 gcccgcggtg cagcgtgtcg gcgagcgatt gctcgccgat catccgcacg cggcggatcg
     1561 gctgatcgcg cgctggatcg gcggcgcggc acgctttgca cgcgcctgat tcacctccca
     1621 gtcgttgacg cgcgcgggct cggccagcac aatacgcgcg tcctgcggac gccgtccgca
     1681 tcgacatcct gtcctgactt ttcaaggcat atggacgttt accctagtcg caacgtcggc
     1741 acctgcttgc ttcaggtgtc ggcactgcat cacaagctga ttgtctgcgg cagccgccag
     1801 cggtcggccg gtcttttcct cgactaggaa acgccggctc tctccaccgg cgctgcgcgc
     1861 cctgtttgga gacgagccat gaagctcctt cgcgatgtcc ttcgtctgcg ggtaccccgc
     1921 agcccggccg gcgctcgccg cgatgcgcgc gtgcgcgagt ttgtcgtgac cgtgccggcg
     1981 ccgttggcgg gccgtgccca gagtgccagt
//
LOCUS       DASSVL010000047         7199 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_636480, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000047 DASSVL010000000
VERSION     DASSVL010000047.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 7199)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7199)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7199
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_636480"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            99..1322
                     /locus_tag="VFM52_00780"
     CDS             99..1322
                     /locus_tag="VFM52_00780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008435329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HET8763733.1"
                     /translation="MTIAAQATTAPPLTLDAAVRQGVSGAPLLAARRADLDAVRDEAA
                     RAGRLPDPSLTFGVSNYPVTGPGAFSLRSDAMTMSTIGVMQAIPSRAARAAERSLAGA
                     QVDAAEAERTATAQEVRVRVANAWIGVWAATRQRSLLDDLHDESALAVQIAKARLRGG
                     SGSAADVLATQAEALALANRIEAAGAELQAARASLQRWLGDMPATLAEAPDFGQLPVA
                     ADQLERDTDRQAPMQAWQARERVADAALEQARASKHPDWNVDVTYGRRAPYLADMVMV
                     QVGVSLPLFARNRQDRAISAKQAARDAVESAHEDARRAQRETVARDIAAWQGWGRQIA
                     RDRAALLPLAHDRSAVALAAYRGGGTLQPWLDARRDEIALRLDYAAALAARARAWAAL
                     AYLLPTPTPDLEKLP"
     gene            1319..2590
                     /locus_tag="VFM52_00785"
     CDS             1319..2590
                     /locus_tag="VFM52_00785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007080846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HET8763734.1"
                     /translation="MKRIGIVIGGLAGAAALLALGYAAGRHFSATPRPEVAAQGTQRK
                     VLYWYDTMVPDQHFDHPGLSPMGMQMVPRYADDDGAGKDVVRIDPATVQNLGVRTTPV
                     VRRVLAAQLDVPGTVGWNLRDATIVSARVDAVVKRLAVRAPYTPVKAGQPLAELLAPA
                     WTSAIDEYRALRQARSPDAQALRAASRQRLQALGLTAQDIASAREGRVTVHAPRAGVV
                     TTLAVRAGQQVTAGQTLMTLDEPSTVWVEAALPQAAADNVRAGTPVSVHAAAVPGREF
                     HGRVETLLPDLDATTRTQRARIVLANPDHALSPGMFVDVVLQPPAGPAVPVVPNDAVI
                     ATGDTAPRVIVAEGDGRFRPDAVRLGRSAGGYTAILGGLAGGERVVVSGQFLIDSEAS
                     LSGALQRLQASEPAPAASAAMPGMPHPEHRP"
     gene            2587..5766
                     /locus_tag="VFM52_00790"
     CDS             2587..5766
                     /locus_tag="VFM52_00790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005995740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0051139 - metal cation:proton antiporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CusA/CzcA family heavy metal efflux RND
                     transporter"
                     /protein_id="HET8763735.1"
                     /translation="MIGRLIRAAIRYRIFVLLAALVLAAVGMVSAWHTSIDALPDLSD
                     TQVIIRTPYPGQSPQVVEDQVTYPLATTMLSVPGATTVRAYSFFGDSFVDVLFDDHTD
                     LYWARSRVLEYLSQARGQLPAGVDPALGPDATGLGWIYEYALVDRTGRHDIGQLTALQ
                     NWTLRFQLKTVPGVAEVATLGGMDRAWQIVPDPPALAARGLTVAQLVDAVQAANGANG
                     GSVIEQGEAELMVRSEGYLRTRADFENVPLGANANGVPVRLRDVATVRRGPTFRRGIA
                     DLDGQGEVVGGIIVMRSGANAKATIAAVKARLAQLQRSLPPGVEIVPTYDRSQLIDAA
                     VQNLWGKLLEEFLIVALVCVLFLGHLRSALVAVVTLPLGVLAAFIVMNLQGVTANLMS
                     LGGIAIAIGAMVDAAIVMIENTHQHLERWRDAHAGAEPQGPARWALIAEATVEVGPAL
                     FVSLLVIALSFVPVFALQGQEGKLFKPLAYTKTYAMAAAAGLAVTLVPVLMGYLVRGR
                     IRAERANPLNRWLVALYAPVLGGVLRRPKTTLALAGALMLTTLVPLRQLGSEFMPAMD
                     EGTLLYMPTALPGLSAGKAAQLLQLTDRMLKTVPEVAHVFGKAGRADTATDPAPLEMF
                     ETTITFKPKEQWRPGMTMDGIKAALDRAVQVPGLTNLFVPPIRNRIDMLATGIKSPIG
                     IKVLGTDQATLQAVADRIELVARTVPGVRSAVAERPASGRYVDVRIHRDEAARYGLTQ
                     AQVQQLIATVVGGDPVGVSIAGRERFPIVVRYPRVDRDSVQALRQLPIVAASGAQLTL
                     GQVADIAVVAGPAMLRSEDGQLATYVYVDTAAGNLGGVVARLQQAVARQVRLPTGVSL
                     QWSGQFQALASAAQRLRLVVPVALLIIFMLIYAVFRRTAEALLVMAGVPLALVGGLWL
                     VWLLGQSISVATVIGFIALAGVAAEFGVVMLLYLRHAWERQLARDPRAGFAALDEAIQ
                     QGAAQRVRPLAMTVMVIIAGLLPILLGHGAGAEVMQRIAAPMVGGMLTATLPTMLALP
                     AAFRLLMRHRLRGAARPPRPHHPPRELEP"
     gene            5874..6098
                     /locus_tag="VFM52_00795"
     CDS             5874..6098
                     /locus_tag="VFM52_00795"
                     /inference="COORDINATES: protein motif:HMM:NF023036.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper-binding protein"
                     /protein_id="HET8763736.1"
                     /translation="MQGTGIVTAIDAARGTITLRHQAIAAIGWPAMTMTFRADPPALL
                     SKLKVGAPVRFTLHPAGAASTVTAIAPLRP"
     gene            complement(6130..7177)
                     /locus_tag="VFM52_00800"
                     /pseudo
     CDS             complement(6130..7177)
                     /locus_tag="VFM52_00800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015446472.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
BASE COUNT          973 a         2562 c         2629 g         1035 t
ORIGIN      
        1 cgacgcgggt tcgatcacgg gagtgaatcc tcatgttgtt ttccggtttg gcccggcgcc
       61 gttgcgcgcg ggtcctgctt gtcgtcctgg gcgcatcggt gacgattgcg gcccaggcca
      121 ccactgcgcc gcccctgaca cttgatgccg ccgtgcggca gggcgtatcc ggcgcaccgc
      181 tactcgcggc gcgccgcgcc gacctcgatg cagtgcgtga cgaggcggcg cgcgcggggc
      241 gcctgcccga cccgtcactg accttcggcg tgtccaacta tccggtcacc ggccccggcg
      301 ccttcagcct gcgctcggac gccatgacca tgagcacgat cggcgtgatg caggcgattc
      361 cctcgcgggc cgcgcgcgcc gccgagcgtt cgctggccgg tgcccaggtg gatgccgcgg
      421 aggccgagcg cacggccacc gcgcaggagg tgcgcgtgcg tgtggccaat gcctggatcg
      481 gcgtgtgggc ggccacccgg cagcgttcct tgctggatga cttgcatgat gaaagcgctc
      541 tcgccgtgca gatcgccaaa gcccggctgc gtggcggcag cggcagtgcg gccgacgtcc
      601 tggcgacgca ggccgaagcc ctggcgctgg ccaaccggat cgaggcggcc ggcgcggaac
      661 tgcaggcggc gcgggcgtcc ttgcagcgtt ggctgggcga tatgccagcc acgttggccg
      721 aagccccgga tttcggccag ttgccggtgg cggcggacca actggagcga gacaccgacc
      781 ggcaggcacc gatgcaggcg tggcaagcgc gcgaacgggt ggctgatgcc gcactggaac
      841 aggcgcgcgc cagcaagcac ccggactgga acgtggacgt cacctacggc cgccgcgcgc
      901 cgtatctcgc ggacatggtg atggtgcagg tcggggtgag cctgccgctg tttgcgcgca
      961 accggcagga tcgcgccatc agcgcgaagc aggccgcacg cgatgcggtc gagtcggcgc
     1021 acgaggatgc gcgccgtgcg cagcgcgaga ccgtcgcccg cgacatcgcg gcgtggcagg
     1081 gctggggccg gcagatcgca cgcgaccgcg ccgcgctgct gccgctggcg cacgaccgca
     1141 gcgcggtggc actggctgcg tatcgcggcg gcgggacgct gcagccgtgg ctggacgccc
     1201 gccgcgacga gatcgccctg cgcctggatt acgccgcggc gctggccgcc cgggcgcgtg
     1261 cctgggcagc gctcgcctac ctgttgccca cccccacccc ggatctggag aagctgccat
     1321 gaaacgcatc ggcatcgtga tcggcggcct ggcgggcgct gccgcactgc tggcgctggg
     1381 ctacgccgcc ggccgccact tcagcgccac gcccaggccg gaggtcgccg cgcaaggcac
     1441 gcagcgcaag gtgctgtact ggtacgacac gatggtgccg gaccagcact tcgatcaccc
     1501 cggcctgtcg cccatgggca tgcagatggt gcccaggtac gcggatgacg acggcgccgg
     1561 caaggacgtg gtgcgcatcg accccgccac cgtgcagaac ctcggcgtgc gcacgacacc
     1621 cgtggtgcgc cgggtgctgg ccgcgcaact cgacgtgccc ggtaccgtgg gctggaacct
     1681 gcgtgacgcc accatcgtca gcgcccgggt cgacgcggtg gtgaaacgcc tcgccgtgcg
     1741 cgcgccgtac accccggtca aggccggaca gccgctggcc gagctgctgg caccggcttg
     1801 gaccagcgcc atcgacgagt accgcgcgtt gcggcaggca cgctcgcccg acgcccaggc
     1861 gttgcgcgcg gcgtcacgcc aacggctgca ggcgctgggc ctgaccgcgc aggacatcgc
     1921 ttccgcacgc gaggggcgcg tcaccgtgca tgcgccacgg gccggcgtgg tcaccacgct
     1981 ggccgtgcgc gcgggccagc aggtcaccgc cggccagacg ctgatgacgc tcgacgaacc
     2041 gtccacggtc tgggtcgaag cggcgctgcc acaggccgcg gcggacaacg tgcgcgccgg
     2101 cacgccggtg agcgtgcacg cggcggccgt gcccggccgg gagttccacg gccgggtgga
     2161 aaccctgctg ccggacctcg acgccacgac gcgcacccag cgcgcgcgca tcgtgctggc
     2221 caatccggac cacgcgctga gcccggggat gttcgtcgac gtggtgctgc agccgccggc
     2281 cggaccagcg gtgccggtgg tgccgaatga cgcggtgatc gcgaccggcg acacggcgcc
     2341 gcgggtgatc gtggcggaag gcgacggccg cttccggccg gacgcggtgc gcctcggccg
     2401 ttccgccggc ggctacaccg cgatcctcgg cgggctggcc ggcggcgaac gcgtggtggt
     2461 gtccggccag ttcctgatcg attcggaggc gagcctgtcg ggtgcgctgc aacggctgca
     2521 ggcgagcgag ccggcacctg cggcgagtgc cgccatgccg ggcatgcccc atccggagca
     2581 ccggccatga tcggccgcct gatccgcgcc gcgatccggt atcgcatctt cgtgctgctg
     2641 gccgcgctgg tgctggcggc ggtcggcatg gtctcggcgt ggcacacgtc catcgacgcg
     2701 ctgccggacc tctcggacac ccaggtcatc atccgcaccc cgtatccggg ccagtcgccg
     2761 caggtggtgg aagaccaggt gacctacccg ctggccacca ccatgctgtc ggtgcctggc
     2821 gccaccacgg tgcgcgcgta ctcgttcttc ggcgactcct ttgtggacgt gctgttcgac
     2881 gaccacacgg atctctactg ggcgcgctcg cgggtgctgg agtacctgag ccaggcacgc
     2941 ggccaactgc cggcgggggt cgatcccgcg cttggcccgg atgccaccgg cctgggctgg
     3001 atctacgaat acgcgctggt cgaccgcacc ggccggcacg acatcggcca gctcaccgcg
     3061 ctgcagaact ggacgctgcg cttccagctg aagaccgtgc ccggcgtggc cgaggtggcg
     3121 accctgggcg ggatggatcg cgcgtggcag atcgtgccgg atccaccagc gttggcggcg
     3181 cgcggcctca ccgtggcgca gctggtcgac gccgtgcagg cggccaacgg ggcgaatggc
     3241 ggctcggtga tcgaacaggg cgaggccgag ttgatggtgc gcagcgaggg ctatctcagg
     3301 acccgcgcgg acttcgagaa cgtgcccctc ggcgccaatg cgaacggcgt gccggtgcgg
     3361 ctgcgcgacg tggccaccgt gcgccggggg ccgaccttcc gtcgcggcat cgccgacctg
     3421 gacggccagg gcgaagtggt cggcggcatc atcgtgatgc gctcgggcgc gaacgccaag
     3481 gccaccatcg cggcggtgaa ggcgcgcctg gcgcaactgc aacgcagcct gccgccgggc
     3541 gtggagatcg tgcccaccta cgaccgctcg cagctgatcg acgccgcggt gcagaacctg
     3601 tggggcaagc tgctggaaga gttcctgatc gtcgcgctgg tctgcgtgct gttcctcggc
     3661 cacctgcgct cggcgctggt cgccgtcgtc accttgccgc tgggcgtgct ggccgcgttc
     3721 atcgtgatga acctgcaggg cgtcacggcg aacctgatgt cgctgggcgg catcgccatc
     3781 gccatcggcg cgatggtgga cgcggcgatc gtgatgatcg agaacaccca ccagcacctg
     3841 gagcgctggc gcgacgcgca cgccggtgcc gagccccagg ggcctgcccg ctgggcgctg
     3901 atcgccgagg ccacggtgga agtggggccg gcattgttcg tcagcctcct ggtgatcgcg
     3961 ctgtcgttcg tgccggtgtt cgcgctgcag ggccaggagg gcaagctgtt caagccgctg
     4021 gcctacacca agacctacgc gatggcggcc gcggccggcc tggcggtgac cctggtgccg
     4081 gtgttgatgg gctacctggt gcgcggccgc atccgcgccg aacgcgccaa cccgctcaac
     4141 cgctggctcg tcgcgctgta tgcgccggtg cttggcggcg tgctgcgccg gccgaaaacc
     4201 acgctggcgc tggccggcgc gctgatgctc accaccctgg tgccgctccg ccagctcggc
     4261 agtgaattca tgccggcgat ggacgagggc acgctgctgt acatgcccac cgcgctgccg
     4321 gggctgtcgg ccggcaaggc cgcgcagctg ctgcagctca ccgaccgcat gctgaagacg
     4381 gtgcccgagg tcgcccacgt gttcggcaag gcgggccggg ccgacaccgc caccgacccg
     4441 gcaccgctgg agatgttcga gaccacgatc accttcaagc cgaaggagca gtggcgcccc
     4501 ggcatgacga tggacggcat caaggcggcg ctggaccgcg ccgtgcaggt gccggggctg
     4561 accaacctgt tcgtgccgcc gatccgcaac cgcatcgaca tgctcgccac cggcatcaag
     4621 agcccgatcg gcatcaaggt gctgggcacc gaccaggcca cgctgcaggc cgtggccgat
     4681 cgtatcgagc tggtggcgcg gacggtgccc ggcgtgcgct cggcggtggc cgagcggccg
     4741 gccagcggac gctacgtcga cgtgcggatc caccgcgatg aggccgcgcg ctacggcctg
     4801 acgcaggcgc aggtgcagca gttgatcgcc accgtggtcg gcggcgaccc tgtcggcgtg
     4861 agcatcgccg ggcgcgaacg cttccccatc gtggtgcgct atccgcgcgt ggaccgcgat
     4921 tcggtgcagg cgctgcggca actgccgatc gtggccgcca gcggcgccca gctcacgctg
     4981 ggccaggtcg ccgacatcgc ggtcgtggcg ggcccggcga tgctgaggag cgaggacggc
     5041 cagctggcga cctacgtcta cgtcgacacc gccgccggca acctcggcgg cgtggtcgcc
     5101 cggctgcaac aggcggtggc acgccaggtc cggctgccca ccggcgtcag cctgcagtgg
     5161 tcggggcaat tccaggctct ggccagcgcg gcgcagcggt tgcgcctggt ggtgccggtg
     5221 gcgctgctca tcatcttcat gctgatctac gccgtgttcc ggcgcaccgc cgaggcgctg
     5281 ttggtcatgg ccggcgtgcc gctggcgctg gtcggtggcc tgtggctggt ctggctgctc
     5341 gggcagtcga tatcggtggc gacggtgatc ggcttcatcg ccctggccgg cgtcgccgcg
     5401 gagttcggcg tggtgatgct gctgtacctg cgccacgcct gggaacggca gctcgcgcgc
     5461 gatccccggg ccggtttcgc ggcgctcgac gaggcgatcc agcagggcgc cgcgcaacgc
     5521 gtgcggccgc tagcgatgac ggtgatggtc atcatcgccg gcctactgcc gatcctgctc
     5581 ggccacggcg ccggcgccga agtcatgcag cgcatcgcgg cgccgatggt cggcggcatg
     5641 ctcacggcga cgctgcccac catgctcgcg ttgccggcgg cgttccgcct gctgatgcgc
     5701 caccggctgc gcggggcggc gcggccgccc cggccccacc atccgccccg ggagctcgaa
     5761 ccatgaagca ccccgttccc acccttgcct gcgccgctgc gctggccctg gccgcgccgc
     5821 tcgccatgcc gcagcaagcg gctccggccc ggccggcggc acacgctgca ccggtgcagg
     5881 gcaccggcat cgtcacggcc atcgatgccg cgcgcggcac gatcacgctc cggcaccagg
     5941 cgattgccgc catcggctgg ccggcgatga ccatgacttt cagggccgac ccgcctgccc
     6001 tgctgtcgaa gctgaaggtc ggcgcgccgg tgcggttcac gctgcacccg gccggcgcgg
     6061 ccagcacggt gacggcgatt gccccgctgc gcccctgaac cactcaagca aagcgggttc
     6121 gcgcgccggt cagcgcttgg ccggcgcgct gcgcagcggc gcggtcgagc cgcgcaccac
     6181 cagctcgggg ctgaagccct ggccgcgcag gtcgagcggc tcgccgttcg cctcgcgctg
     6241 caggttgcgg atcagccggt gcgccgccgc gtgggcgatc tcctcggtgg cctggcgcgc
     6301 ggtggtcagc gccggccacg actgcttgga gaacgggctg tcctcgaagc cggcgatcga
     6361 cagctcccac ggcacgctga tgccgcccga gtgcgcggcg gccagcacgc cggccgcgat
     6421 ttcgtcgttc gagccgaaga tcgccgtcgg ccggttggcc agcgccagca gcttgcgcgc
     6481 accgcggaag ccgtcatcga acgagtagtc ccccggcagc accagctcgc tgtcgagggc
     6541 gatgccgtaa tccttcagcg catcctcgta gccctggtaa cgctccgggc tggaacggtg
     6601 gtcgcgcccg ccccacagga aaccgatgcg ggtatgccca agctgtcagg tgctcggtga
     6661 tcgcatacgc ggcgtcgcgg tcgtccacgt acacgcaggg gtagccgtcg cccgggtcct
     6721 cgcgcgcgga gatgatgcgc gtgaagcgca ccttggcggc ggccaagcgt tcgatcagcg
     6781 cggcctgctc ggacatcggc ggcgccagca ccagcccggc caggcgcgca tgcgcgacca
     6841 gccggatcag ctcgtcggcg agcgccggcg aggtcgagtc gcagggatgg atctgcagca
     6901 cgtagccgtc ttcgcggcac gcggccagca ccccgctctg catgctgatg atgtagtgcg
     6961 ggttggggtt gtcgtagatg agcccgagcg cgtacgcgcg ggtgctgcgc aggctgcgcg
     7021 cggacggatt gggctggtac cccagcgtct cgatcgcgcg ctgcaccttt tcccgcgttt
     7081 gcgcatgcac cgacggctcg ttgttgatga cccgcgagac ggtcttcagc gaaacgccag
     7141 cctgctcagc aacatccttg atggtcgcgc cgcgcaagca gataccctca aacgtcgat
//
LOCUS       DASSVL010000048         2916 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_113887, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000048 DASSVL010000000
VERSION     DASSVL010000048.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2916)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2916)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2916
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_113887"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..522)
                     /locus_tag="VFM52_00805"
     CDS             complement(<1..522)
                     /locus_tag="VFM52_00805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007804530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase family protein"
                     /protein_id="HET8763737.1"
                     /translation="MRHALIFAAGLGERMRPLTDRTPKPLLMAGDKPLIAWHLEKLAA
                     TGVRYVVINTSHLAEQFPAALGDGSRWGLRIRYAYEGPTPLETGGGMLNALTLLGDAP
                     FIAVNGDIHSDVDYASLPVEPQGLAHLVMVDNPAHHPGGDFGLDAQEVLHAEAPSRLT
                     FSGIGVYRPALLQD"
     gene            complement(519..1529)
                     /locus_tag="VFM52_00810"
     CDS             complement(519..1529)
                     /locus_tag="VFM52_00810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007512108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphotransferase"
                     /protein_id="HET8763738.1"
                     /translation="MTPIADRAAARLAWTRHALDDASLTLQPASSDASFRSYWRTTHG
                     GQSWIVMDSPPQREDPRPWLAIGARLAAAGLHVPAVRTQDLQQGFLLIEDLGSRLYLD
                     ELNEANADQLYGDAMNALLAMQTRVACDDLPPFDHAVLVSGLEVMPEWFLQRHLGHTP
                     GCGEWDVLEAAFDVIVRNALAQPRCFVHRDFHSRNLLAVDANNPGIIDFQGALHGPLT
                     YDLASLLRDAYIAWPRARVEGWVESYRHRLRDAGVIDASVDAARFLRWFDLTGLHRHV
                     RVLGQFYRLWYRDGKPGYLKDVPQVYRYVVEVARSYPELADFAALLERHVQGRDLTQV
                     AA"
     gene            1673..2161
                     /locus_tag="VFM52_00815"
     CDS             1673..2161
                     /locus_tag="VFM52_00815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015447127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SUF system Fe-S cluster assembly regulator"
                     /protein_id="HET8763739.1"
                     /translation="MLRVSRLTDYATVVMTCIAAHPAEVLSAVQIADETRLELPTVSK
                     LLKALGHAALVESFRGVNGGYRLARPAGEISLAEIVEAIEGPIGMTECSVAEGQCELE
                     SQCGVRGSWQLVNNVLDNALRAVSLADMLKPQPPRPPRRVAAVPLGEIAMPAKARRVT
                     TE"
     gene            2170..>2916
                     /locus_tag="VFM52_00820"
     CDS             2170..>2916
                     /locus_tag="VFM52_00820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007804537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly protein SufB"
                     /protein_id="HET8763740.1"
                     /translation="MNNQSSTAAALRDNAQVAEALGRSYSAGFITEIEMTGLPPGLDE
                     GTIRALSAVKHEPEWMTEWRLEAYRHWLTMPKPDWAKLNIDPIDYQAISYYAAPKKQP
                     KSLDEVDPALLETYEKLGVPLHERAALAGVAVDAVFDSVSVGTTFRKELADKGVIFCS
                     MSEAIREYPELVRQYLGSVVPTGDNFFAALNSAVFSDGSFVFIPKGVRCPMELSTYFR
                     INASDTGQFERTLIVCEDGAYVSYLEGCTAP"
BASE COUNT          487 a          988 c         1009 g          432 t
ORIGIN      
        1 gtcctggagc agcgccggac ggtagacacc gatgccgctg aaggtcagcc gggacggggc
       61 ttcggcatgc aggacttcct gtgcgtccag gccgaagtcg ccgcccgggt ggtgggccgg
      121 attgtcgacc atcaccaggt gcgccaggcc ctggggctcg accggcagcg aggcgtagtc
      181 gacgtcactg tggatgtcac cgttgaccgc gatgaacggc gcatcgccca gcagggtcag
      241 cgcgttgagc atgccgccgc cggtttccag cggggtgggg ccttcgtagg cgtagcggat
      301 gcgcaggccc cagcgcgagc catcgcccag cgcagcggga aactgctcgg ccaggtgcga
      361 ggtgttgatg accacgtagc gcacgccggt cgcggccagc ttttccaggt gccatgcgat
      421 cagtggcttg tcgcccgcca tgagcagcgg cttgggcgtg cggtcggtca acgggcgcat
      481 gcgctcgccc aggcccgcgg cgaagatcag cgcatgcctc acgcggccac ctgcgtgagg
      541 tcgcggccct gcacgtggcg ttccagcaac gcggcgaagt cggccagctc ggggtagctg
      601 cgcgccacct cgaccacgta gcggtacacc tgcggcacgt ccttgagata gcccggcttg
      661 ccgtcgcggt accacagtcg gtagaactgg cccagcacgc gcacgtggcg gtgcaatccg
      721 gtgaggtcga accagcgcag gaaacgcgcg gcatccacgc tggcgtcgat cacgccggcg
      781 tcccgcaggc gatgccggta ggactccacc cagccctcga cgcgcgcacg cggccacgcg
      841 atgtaggcgt cacgcagcag cgaggccagg tcataggtga gcggaccgtg cagcgcgccc
      901 tggaagtcga tgatccccgg gttgttcgca tcgaccgcca gcaggttgcg gctgtggaaa
      961 tcgcggtgca cgaaacagcg cggctgcgcc agcgcgttgc gcacgatcac gtcgaacgcg
     1021 gcctccagca cgtcccattc cccgcagccg ggcgtgtggc cgaggtgacg ctgcaggaac
     1081 cattcgggca tcacttccag cccgctcacc agcacggcat ggtcgaacgg cggcagatcg
     1141 tcgcaggcca ccctcgtctg catcgccagc agcgcgttca tcgcgtcgcc gtagagctgg
     1201 tcggcattag cctcgttcaa ttcgtcgaga tacagacgcg agcccaggtc ctcgatcagc
     1261 aggaagccct gctgcaggtc ctgcgtccgc accgccggca cgtgcaggcc ggcggcggcc
     1321 aatcgcgcgc cgatcgccag ccacggccgc gggtcttcgc gctgcggcgg cgaatccatc
     1381 acgatccagc tttgcccgcc gtgcgtggtg cgccagtagc tgcggaagct ggcgtcggaa
     1441 gaggccggct gcagggtgag gctggcatcg tccagcgcgt ggcgggtcca ggcgaggcgg
     1501 gctgcggcgc gatcggcaat cggggtcatg acaagcgtgg gcaacggagt ggcgccagct
     1561 tagcgagccg tcggcgtggt gacgaggtgg cggacgcggc ggcattgacc gcgcggcatc
     1621 gaatcagtac cattttagtc ccgattcaac cctgccagcc cgagcgctcc ccatgctccg
     1681 cgtcagccgc ctcaccgatt acgccaccgt ggtgatgacc tgcatcgccg cgcacccggc
     1741 cgaggtgctc agcgcggtgc agatcgccga cgagacgcgg ctggaactgc ccaccgtgag
     1801 caagctgctg aaggcgcttg gccatgccgc gctggtcgag tcgttccgcg gcgtcaacgg
     1861 cggctaccgg ctggcccgtc cggccggcga gatttcgctg gccgagatcg tcgaggcaat
     1921 cgaagggccg atcggcatga ccgaatgcag cgtcgccgaa ggccagtgcg aactcgagtc
     1981 gcagtgcggc gtgcgcggca gctggcagct ggtcaacaac gtgctggaca acgcgctgcg
     2041 cgcggtcagc ctggccgaca tgctcaagcc gcagccgcca cggccgccgc gacgggtcgc
     2101 cgccgtgccg ctgggcgaga tcgcgatgcc ggcgaaagcc cgccgggtca ccaccgaatg
     2161 aacgagatca tgaacaacca gagcagcacc gccgccgcac tgcgtgacaa cgcacaggtg
     2221 gccgaggccc ttggccgcag ctacagcgcg ggcttcatca ccgagatcga gatgaccggc
     2281 ctgccgccgg gcctggacga gggcaccatc cgcgcgctgt ccgcggtcaa gcacgagccg
     2341 gagtggatga ccgagtggcg gctcgaggcc tatcggcact ggctgaccat gcccaagccg
     2401 gactgggcca agctcaacat cgacccgatc gactaccagg cgatcagcta ttacgccgcg
     2461 ccgaagaagc agcccaagtc gctggacgaa gtcgatccgg ccctgctgga aacctacgag
     2521 aagctcggtg taccgctgca cgagcgcgct gcgctggccg gcgtggcggt ggatgcggtg
     2581 ttcgactcgg tctcggtcgg caccaccttc cgcaaggagc tcgccgacaa gggcgtgatc
     2641 ttctgctcga tgtcggaggc gatccgcgaa tacccggaac tcgttcgcca gtacctgggc
     2701 agcgtggtgc cgaccggcga caacttcttc gccgcgctga actcggcggt gttctccgac
     2761 ggcagcttcg tgttcatccc caagggcgtg cgttgtccga tggagctgtc cacgtacttc
     2821 cgcatcaatg ccagcgacac cggccagttc gagcgcacgc tgatcgtctg cgaagacggc
     2881 gcctacgtgt cctacctgga aggctgcacc gcgccg
//
LOCUS       DASSVL010000049         3342 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_354278, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000049 DASSVL010000000
VERSION     DASSVL010000049.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3342)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3342)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3342
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_354278"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            162..647
                     /locus_tag="VFM52_00825"
     CDS             162..647
                     /locus_tag="VFM52_00825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007510599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RcnB family protein"
                     /protein_id="HET8763741.1"
                     /translation="MKKLQGLSVACGVLLMLAGGTALAQDYGNGHGRGHDRQRQNDGD
                     RGYDGGDARYVSYDQGDDYDHGHDHGHDHDHGRGHGRGNAYGHYKSWGDRGRHEGWYK
                     RGGYLPVEYRSTRYVVYDWRDAHLREPPRGYRWVRSDDGAFLLVAITTGIIANIIASG
                     Q"
     gene            complement(668..1156)
                     /locus_tag="VFM52_00830"
     CDS             complement(668..1156)
                     /locus_tag="VFM52_00830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015447237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HET8763742.1"
                     /translation="MSSPFLIRPIQPADDAAMAAVIRTVMPAFGADGPGFAIHDAEVD
                     TMSAAYAQPRRSYFVVEIAGQVAGGAGIAPLDGGETDTCELRKMYFLPGARGIGAGTA
                     MMARCLDAARAHGFRRCYLETLTGMDAAQDLYRRSGFLRIDHAMGATGHGGCDRWYLR
                     EL"
     gene            1221..1856
                     /locus_tag="VFM52_00835"
     CDS             1221..1856
                     /locus_tag="VFM52_00835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015447238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HET8763743.1"
                     /translation="MLVYDAISPAPRCLRMFLLEKRLHLPAVTVDVMTGENREAAYLA
                     VNPAGQTPALRLDDGTTLAEAVAIAEYLEELHPEPALIGRTAAERAQTRMWWRRVELN
                     ITEFIHNAFHYAEGLPRFTPRIPVAPEAAAGLKRIAQDRLAWLDRMFGAGPYLCGERF
                     TAADIWLYVWLDFGAGVQQPFDRALPKLGPWFERVAARPAAAASRHLLASA"
     gene            1853..2341
                     /locus_tag="VFM52_00840"
     CDS             1853..2341
                     /locus_tag="VFM52_00840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017462871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HET8763744.1"
                     /translation="MSASEARRDLPVRCRMVAVVALRGTGDSTRMLIARRASAYLRGV
                     WSYIAGHVQAGETGAQAALRELAEETALVPEAFHATSFCERFYAPESDDIEIVPAFVA
                     RVALDAEVRLNAELSAFRWVTLDEAAGLLPFGSQRELIAHVQREFVAREPSPFLRLSP
                     GR"
     gene            complement(2325..3245)
                     /locus_tag="VFM52_00845"
     CDS             complement(2325..3245)
                     /locus_tag="VFM52_00845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007510614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylglutaryl-CoA lyase"
                     /protein_id="HET8763745.1"
                     /translation="MNTDNHVRIVEVGARDGLQNEKTLLPAEVKIALIDRLSATGLST
                     IEATSFVSPKWVPQLADAAEVYAGIRKVPGVGYPVLVPNLQGYERAREVGAAEIAVFT
                     AASEAFNRRNINASIDESIERFGPVLERAKADGVAVRGYVSTVLGCPYQGEVPVHDVV
                     RVARRLHELGCHEISLGDTIGVGTPAKARAMLHAVAQEVPMAALAVHFHNTYGQALAN
                     ILACLDEGVRVIDSSVSGTGGCPYAKGATGNVASEDVVYMLDGMGMQTGVDLDLLIAT
                     GAWLSGQLHKPTASRVNRARTGPQAVSDQG"
BASE COUNT          498 a         1123 c         1174 g          547 t
ORIGIN      
        1 cagcggcatt ggctgctggc tgaacgcgaa acccgccggg cccgaatggt tcacgcccgg
       61 ttgcggcgtt ggagacgaat tttgcattgg gtcgcactgg agaaccgggc gaccgcgtta
      121 cgatccgggc gggttccatg atccatcgag cggaggtcga catgaagaag ctgcaggggc
      181 tgtctgtcgc gtgtggtgtg ctgctgatgc tggccggcgg taccgcgctg gcgcaggact
      241 acggcaacgg gcacggccgg gggcatgatc gccaacgaca gaacgatggc gatcgcggct
      301 acgatggtgg tgacgcccgc tatgtgagct acgatcaggg cgacgactat gaccacggcc
      361 atgaccacgg ccatgaccac gatcatggtc gtggccacgg ccgcggcaac gcctatggcc
      421 actacaagag ctggggcgac cgcggccgcc acgagggctg gtacaagcgc ggcggctatc
      481 tgccggtgga ataccgcagc acccgctacg tggtgtacga ctggcgcgat gcccacctgc
      541 gcgagccgcc gcgcggctac cgctgggtgc gcagcgacga tggcgcgttc ctgctggtgg
      601 cgatcaccac cggcatcatt gccaacatca ttgcctctgg ccaatgagcc ttgccggccg
      661 gccgcgttca cagctcgcgc aggtaccagc gatcgcagcc gccgtggccg gtcgcgccca
      721 tcgcgtggtc gatgcgcagg aagccgctgc gccggtagag atcctgcgcg gcatccatgc
      781 cggtcagcgt ttcgagatag cagcggcgga agccgtgggc gcgtgcggcg tcgaggcagc
      841 gcgccatcat cgcggtgccg gcgccgatgc cacgcgcgcc cggcaggaaa tacatcttgc
      901 gcagctcgca ggtgtcggtt tcaccgccgt cgagcggcgc gatgccggcg cccccggcga
      961 cctggcccgc gatctcgacg acgaagtagc tgcggcgcgg ctgcgcatac gcggcgctca
     1021 tggtgtcgac ctcggcgtcg tggatggcga agccggggcc gtcggcgccg aaggcgggca
     1081 tcacggtgcg gatgacggcg gccatcgcgg catcgtcggc gggttggatc gggcggatca
     1141 ggaaaggaga ggacatggat caggatggtg gttgataagc gtcgatatag tgtgcgcgtt
     1201 gcctgccccg gagtcatgcc gtgctggtct acgatgccat cagtcccgcg ccgcgctgcc
     1261 tgcgcatgtt cctgctcgaa aagcggttgc acctgccggc ggtcacggtc gacgtgatga
     1321 ccggcgagaa ccgcgaggcc gcgtatctcg ccgtgaatcc ggccgggcag acgccggcgc
     1381 tgcgcctgga cgacggcacc acgctcgccg aggcggtggc gatcgccgaa tatctcgagg
     1441 aattgcaccc cgaaccggca ttgatcgggc gcacggcggc ggagcgtgcg cagacgcgga
     1501 tgtggtggcg gcgcgtcgag ctcaacatca ccgaattcat ccacaacgcg ttccactacg
     1561 cggaaggctt gccgcgtttc acgccgcgca tcccggtcgc gccggaagcg gccgcgggcc
     1621 tcaagcgcat cgcgcaggat cgcctcgcgt ggctggaccg gatgttcggc gccggcccgt
     1681 atctgtgtgg cgagcgtttc actgccgccg acatctggct ctacgtgtgg ctggatttcg
     1741 gcgctggcgt gcagcagccg ttcgatcgcg cgctgccaaa gctcggaccg tggttcgagc
     1801 gcgtggccgc acggccggcc gcggccgcaa gccgccatct cctggcatcg gcatgagcgc
     1861 ctccgaagca cgccgcgacc tcccggtgcg ctgccggatg gtggcggtgg tcgcgctgcg
     1921 cggtacgggt gattccacgc gcatgctcat cgcgcggcgc gcgagcgcct acctgcgcgg
     1981 cgtgtggagc tacatcgccg gccacgtgca ggccggcgaa accggcgcgc aggcggcgtt
     2041 gcgcgagctg gccgaggaga ccgcgctggt acccgaagcc ttccacgcga ccagtttctg
     2101 cgaacgcttc tacgcgcccg aaagcgacga catcgagatt gtgccggcct tcgtcgcacg
     2161 cgtcgcgttg gatgcggaag ttcgcctcaa cgccgagctt tcggcgttcc gctgggtgac
     2221 gctcgatgag gcggcagggc tgctgccgtt cggcagccag cgcgaactga ttgcccacgt
     2281 gcaacgcgag ttcgttgcgc gcgaaccgtc gccgttcctg cgcctcagcc ctggtcgctg
     2341 accgcctgcg ggccggtgcg tgcgcggttg acgcggcttg ccgtcggctt gtgcaactgg
     2401 ccggacaacc aggcgccggt cgcgatcagc aggtcgaggt cgacaccggt ctgcatgccc
     2461 atgccgtcca gcatgtagac cacgtcctcg ctggcgacgt tgccggtcgc gcccttcgca
     2521 tacgggcagc caccggtgcc ggaaaccgag ctgtcgatca cccgcacgcc ttcgtcgagg
     2581 caggcgagga tgttcgccag cgcctggccg taggtgttgt ggaagtgcac ggcgagcgcc
     2641 gccatcggca cctcctgcgc caccgcgtgc agcatcgcgc gcgccttcgc cggcgtgccg
     2701 acaccgatgg tgtcgccgag cgaaatctcg tggcaaccca gctcgtgcag gcgccgcgcg
     2761 acgcgcacca cgtcgtgcac cggcacctcg ccctggtagg ggcagcccag cacggtggag
     2821 acgtaaccac gcaccgccac gccgtcggcc ttcgcccgtt ccagtaccgg cccgaagcgc
     2881 tcgatggatt cgtcgatcga ggcgttgatg ttcctgcggt tgaacgcctc gctggcggcg
     2941 gtgaacaccg cgatctcggc ggcgccgact tctcgcgctc gctcgtagcc ctgcaggttc
     3001 ggcaccagca ccggatagcc cacgcccggt accttgcgga tgccggcgta cacctccgcc
     3061 gcgtcggcga gttgcggcac ccacttcggg ctgacgaagc tggtggcctc gatggtgctg
     3121 aggccggtgg cggagagccg gtcgatcagc gcgatcttca cctcggccgg cagcagagtc
     3181 ttctcgttct gcaggccatc gcgggcgccg acttcgacga tgcggacatg gttgtcggta
     3241 ttcatggttc gtctcaatcc gcgaaagtca cggccacgcg cttgttgtgg ctgcccttgt
     3301 tctcgatcct gctcacgcgc agcgcgccga tctcgccggt gc
//
LOCUS       DASSVL010000050         4282 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1060303,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000050 DASSVL010000000
VERSION     DASSVL010000050.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 4282)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4282)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4282
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1060303"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..575
                     /locus_tag="VFM52_00850"
     CDS             <1..575
                     /locus_tag="VFM52_00850"
                     /inference="COORDINATES: protein motif:HMM:NF015722.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="SUMF1/EgtB/PvdO family nonheme iron enzyme"
                     /protein_id="HET8763746.1"
                     /translation="HRPAAKCAVAYNPFSRLRHLTWQAPGFTQGGNHPVVCVSWDDAA
                     AYAAWLSQTTGQPYVLPGSNQWLRAAQGVPKGDACQLGNVDDASRGTGGDDRWTCNDG
                     AQFTAPVGHYLPSGVGAYDMYGNVSEWLAGGSSGSRPFRGLSWRDGSRQTPLGRQGTA
                     GTDIGYTNVGFRVMRVIDPAHAAPPAASGH"
     gene            612..2966
                     /locus_tag="VFM52_00855"
     CDS             612..2966
                     /locus_tag="VFM52_00855"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF015722.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional serine/threonine-protein
                     kinase/formylglycine-generating enzyme family protein"
                     /protein_id="HET8763747.1"
                     /translation="MLRGAGWHSRLYHRSTGVCRKPPRRMELDGNHPPLHRCEPGHRA
                     GVRASMSFHDAPPETPDCRLVQQIGSSSAPSVYAATQLSSERPLAVKIFHRIDAECLE
                     RLERQLQANAQLAHPNVVRVYGTGRTRDGRLFYAMPLLVGFERMRPNLLGRPPRIAML
                     LRELLAGLDAAHQCGVMHGGIKPSNVLFDEQGRGQLTDFGIARCLADAHGELANPCTD
                     LYGIGMLAYALLADASTTAQRASSGRQPLLQLPPAAAAWQPWLDRALARSPEQQFPNA
                     RAMAGALAAVTNHRPHRGGGGPATRRPKRAPRWRLHTALPIAATVVLLGWATWDYLGE
                     SSPAPENVPAAAASESSIAPPAASIAAPAFPIAAAPAVTTLPAEASSMQTLADRVRTL
                     IGTADTLRTQGHLFSPPFQNAASKYLAALMLDPGNRSAIAGIDATLAALQGQLDKSWQ
                     DGRDTSEAVGMLRQGDEFAKHAIASSRRDWRRYRSRLARRVGDAVAQATRAHDARRIA
                     ALQPLAKALPAKYPAGFDPVASADAANPAVADAPAKGTPDKGGRVRDPRGPLLVYVPA
                     AGGLPAFAIQQVEVTRADYAAFARATHRSAATCLAAHNPFSRLQHLSWQAPGFAQGGD
                     QPVVCVSWDDAAAYAAWLSKTTGESYRLPTGNQWLHAAQGVPKGDPCQLGNVDDDSRQ
                     SKLDDDRWSCSDGAAFTAPVGHYAPSGVGAYDLYGNVSEWVTGGNAGSRRFRGPSWRD
                     GSSNPNPLDLQGTADSDVGYNSVGFRVVRVIDAARPAPPAVPGH"
     gene            3107..>4282
                     /locus_tag="VFM52_00860"
     CDS             3107..>4282
                     /locus_tag="VFM52_00860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017461757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase S10"
                     /protein_id="HET8763748.1"
                     /translation="MHANHLTAAVAALLLCSAPAFAAPPASSAAPSSDAGTTGSLVQR
                     LSQPLSNTTTGTVTVEGKSISYKAVAGTLVIDGTGAKESTPEIAMGYFAYFKQGVDPS
                     KRPITFIYNGGPGSSTMWLHMGAWGPKRVVTNDDTHTPAAPYQVINNDYSLLDASDLV
                     FIDMPGTGFGRLLPQGKDDAERAKSHKELAKQIWGVDGDAQAFAHFITQFMTRYGRWN
                     SPKYLFGESYGTTRSAVLANILQAEDNVDLNGVILLSEILNFDTGIDGANMNPGNDLP
                     YLTALPSYAATAWYHHMLPKYEGKPLTSVLDDAIRFVKTDYQQALFSGVTLGPDARRK
                     IAERMHDLTGLPVAYLLRADLRVSGGMFEQQLQIGDDLATGRLDTRFSGPEMDPMAKE
                     "
BASE COUNT          717 a         1570 c         1390 g          605 t
ORIGIN      
        1 cgcatcgccc cgctgccaag tgcgcggtgg cttacaaccc attctcgcgc ctgcgccatc
       61 tcacgtggca ggcacccggc tttacgcaag gcggcaacca tccggtggtg tgcgtcagct
      121 gggacgacgc cgcggcctac gcggcgtggt tgtcccaaac caccgggcaa ccttacgtgc
      181 tgcccggcag caatcaatgg ctgcgcgcgg cgcagggcgt gcccaagggc gacgcctgcc
      241 aattgggcaa cgtcgacgac gcgagccgcg gcacgggcgg cgacgatcgc tggacgtgca
      301 acgacggcgc ccagttcacc gcaccggtcg gccattacct gcccagcggc gtcggcgcct
      361 acgacatgta cggcaacgtc agcgaatggc tggccggcgg cagcagcggg tcacgtccgt
      421 tccgcggctt gtcctggcgc gatggcagcc gccagacgcc gctcgggcgc cagggcacgg
      481 ccggcaccga catcggctat accaacgtgg gctttcgcgt gatgcgggtg atcgacccgg
      541 cgcacgccgc gcctcccgcg gcttccggtc actgacgccg acgcccggta acacgcgtcc
      601 agctccgcgt catgctgcgc ggcgccggat ggcattcgcg gctgtatcat cgaagcacag
      661 gggtttgccg gaagccgcca cggaggatgg agctcgatgg caaccacccg cccctccacc
      721 gctgcgaacc tggccatcgg gccggtgtcc gcgcgtccat gagcttccac gacgcgcccc
      781 cggaaacgcc cgactgccgg ctggtccagc agatcgggtc gagcagcgcg ccgtccgtgt
      841 acgcggccac gcaactgtca agcgaacgcc cgctggcggt caagatattc caccgcatcg
      901 acgccgagtg cctcgaacgc ctggaacggc aactgcaggc caacgcacaa ctcgcgcatc
      961 cgaacgtcgt gcgcgtgtac ggtaccgggc gcacgcgcga cggccgcctt ttttatgcca
     1021 tgcccctgtt ggtcggcttc gagcggatgc gccccaacct gctcggtcgg ccgccaagaa
     1081 tcgccatgct gctgcgcgag ctgcttgcgg ggctggacgc cgcccaccaa tgcggcgtga
     1141 tgcacggcgg catcaagccg tccaacgtgc tgttcgacga acaaggccgc gggcaactca
     1201 ccgacttcgg gatcgcacgc tgcctggccg acgcgcatgg cgaactggca aacccttgca
     1261 cggatctgta cggcatcggg atgctcgcat acgcattgct ggcagacgca tcgacgaccg
     1321 cgcagcgcgc ctcgtccggc cggcaaccgc tgctgcagtt gccgcccgcc gccgccgcgt
     1381 ggcagccatg gcttgaccgg gcgctggccc ggtcaccgga acaacaattc ccgaacgcac
     1441 gggccatggc cggcgcactc gccgcggtca cgaaccaccg acctcatcgg ggaggaggcg
     1501 ggcctgccac caggcgaccc aagcgcgccc ccaggtggcg gctgcacacc gcgctgccga
     1561 tcgcggcgac cgtggtgttg cttggctggg ccacgtggga ctacctgggt gaatcctccc
     1621 ccgcacccga aaacgtgccc gcggcggcgg ccagcgagtc gtccatcgcg ccgccggcgg
     1681 ccagcattgc agcgcccgcg ttcccgatcg ccgccgcacc cgccgtgacg acactgcccg
     1741 cggaagcttc gtccatgcag acgcttgcgg atcgcgtgcg gacgctgatc ggcacggccg
     1801 atacgctgcg cacccagggg catctgtttt caccgccgtt ccagaacgcc gcaagcaaat
     1861 acctcgcggc gctcatgctg gaccccggca accgctccgc catcgcgggc atcgacgcga
     1921 cgctggccgc gctgcaaggc cagctcgaca aatcctggca ggacggccgc gacaccagcg
     1981 aagccgtcgg catgctgcgg cagggcgatg aatttgcgaa acacgccatc gcgtcttcgc
     2041 gccgcgactg gcgcaggtac cgcagccggc tggcgcgccg ggtcggcgac gccgtcgcgc
     2101 aggcgacgcg cgcgcacgac gcccgcagga tcgcggcgct gcaaccgctc gccaaggcat
     2161 tgccggcgaa gtaccccgcg gggttcgatc cggtcgcgtc ggcggacgcg gcgaatccgg
     2221 ccgtggcgga cgcgccggcg aagggcacgc ccgataaagg cgggcgcgtg cgcgatccgc
     2281 gcggtccgct gctggtttac gtgcctgccg ccggcgggct tccggcgttc gcgatccagc
     2341 aggttgaagt cacgcgtgcg gattacgcgg cgttcgcccg cgcgacgcat cgatcggccg
     2401 cgacgtgcct cgcggcacac aatccgttct cgcgtctgca gcacctcagc tggcaggcac
     2461 ccggcttcgc gcaaggtggc gaccagccgg tggtgtgcgt gagctgggac gatgccgccg
     2521 catacgcggc gtggctgtcg aaaaccaccg gcgagtccta tcgcctgccg accggcaacc
     2581 agtggctgca cgcggcgcaa ggcgtgccga aaggcgatcc ctgccaactc ggcaatgtgg
     2641 atgacgacag ccgccaaagc aaactggacg acgaccgctg gtcctgcagc gatggcgccg
     2701 cattcacggc ccccgtcggg cactacgcgc ccagcggcgt cggcgcctac gacctgtacg
     2761 gcaacgtcag cgaatgggtg acgggcggca acgccgggtc gcgcaggttc cgtggcccgt
     2821 cgtggcgcga cggcagcagc aacccgaatc ccctggacct ccagggcacg gccgattcgg
     2881 acgtcggcta caacagcgtc ggttttcgcg tggtgcgggt gatcgacgcc gcgcgtccgg
     2941 cgccacccgc cgttcccggc cactgactgc cccacggagc accaccccgg tccacgcaag
     3001 catgacttgc ggcgcttggc cgcgggtcgc gcgatccgca tactggacag tccgaacgtg
     3061 accgcacgtc cggatctctt cttgtcacgc ccaccgggga ttctccatgc acgccaatca
     3121 cctgaccgcc gccgtggccg cactcctgct gtgcagcgcg ccggccttcg ccgcaccgcc
     3181 cgccagttcc gcggctccct ccagcgacgc cggcaccacc ggatcgctgg tgcagcgcct
     3241 gtcgcaaccg ctgtccaaca ccaccaccgg caccgtcacg gtggagggca aatccatcag
     3301 ctacaaggcg gtcgccggca ccctggtaat cgacggcacg ggcgcgaagg aatccacgcc
     3361 cgaaatcgcg atgggctact tcgcgtattt caagcagggg gtcgatccgt ccaagcgccc
     3421 gatcaccttc atctacaacg gtggcccggg ttcctcgacg atgtggctgc acatgggcgc
     3481 gtggggcccg aaacgtgtcg tcaccaatga cgacacgcac acgccggccg cgccgtacca
     3541 ggtgatcaac aacgactaca gcctgctgga cgccagcgac ctcgtgttca tcgacatgcc
     3601 gggtaccggc ttcggccgcc tgctgccgca gggcaaggac gacgccgaac gcgccaagag
     3661 ccacaaggaa ctcgccaaac agatctgggg cgtggatggc gatgcccagg ctttcgcgca
     3721 cttcatcacc cagttcatga cccgctacgg ccgctggaac tcgcccaagt acctgttcgg
     3781 cgaaagctac ggcaccaccc gttccgcggt gctggccaac atcctgcagg cggaagacaa
     3841 cgtcgacctc aacggcgtga tcctgctgtc ggaaatcctg aacttcgaca ccggcatcga
     3901 tggcgccaac atgaacccgg gcaacgacct gccgtacctg acggccctgc ccagctacgc
     3961 cgcgaccgcc tggtaccacc acatgctgcc gaagtacgag ggcaagccgc tgacgtcggt
     4021 gctggacgat gccatccgct tcgtcaagac cgactaccag caggcgctgt tttcgggcgt
     4081 cacgctcggc ccggacgccc ggcgcaagat tgcggaacgc atgcacgacc tgaccggcct
     4141 gccggtggcc tacctgctac gcgccgacct gcgcgtcagc ggcggcatgt tcgagcagca
     4201 gttgcagatc ggcgacgacc tggccacggg ccgcctggat acccgcttct cggggccgga
     4261 aatggatccg atggccaagg ag
//
LOCUS       DASSVL010000051         2812 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1201685,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000051 DASSVL010000000
VERSION     DASSVL010000051.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2812)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2812)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2812
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1201685"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..434
                     /locus_tag="VFM52_00865"
     CDS             <1..434
                     /locus_tag="VFM52_00865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017917724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0140662 - ATP-dependent protein folding
                     chaperone [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="Hsp70 family protein"
                     /protein_id="HET8763749.1"
                     /translation="EIKAGSGLSDEEIQRMVADAEANKEEDKKFHELVATRNKADQLV
                     HATRSALKEHGGKVGAQIGGIESALSDLEKVKDGDDKDLIESKITKLEQVAQALYAAA
                     QGGAGAAGGEQPAGGGQGQAKPADDVVDAEFTEVKNDGKSA"
     gene            501..1079
                     /locus_tag="VFM52_00870"
     CDS             501..1079
                     /locus_tag="VFM52_00870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008216698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005267 - potassium channel activity
                     [Evidence IEA];
                     GO_function: GO:0015252 - proton channel activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TMEM175 family protein"
                     /protein_id="HET8763750.1"
                     /translation="MGKGRLEAFSDGVLAIIITIMVLDLKVPHGADLAALVAQWPAFL
                     SYVLSFVYVGIYWNNHHHFMHAAQHVSGAVLWANLHLLFWLSLLPVATGWMGENQFAP
                     LPVAVYGGVLLLCALAWQPFQRTLISANGGRASLLAQAVGADWKGRLAVAMYLTGIAV
                     AFVAPWLACLLYATVAAIWFLPDRRIESRIKQ"
     gene            1076..2197
                     /gene="dnaJ"
                     /locus_tag="VFM52_00875"
     CDS             1076..2197
                     /gene="dnaJ"
                     /locus_tag="VFM52_00875"
                     /EC_number="1.8.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017460816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA];
                     GO_process: GO:0009408 - response to heat [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaJ"
                     /protein_id="HET8763751.1"
                     /translation="MSKRDYYEVLGVERDASEPELKKAFRRLAMKYHPDRNPGDPTAA
                     EKFKEAKEAYEVLADAQKRALYDQYGHAAFENGAGGRGGAGFGDMGDIFGDIFGDIFG
                     GGHGRQQRRGADLRYILELDLEEAVFGIEKKIEIPTQVNCQYCNGSGSADGKTSTCPT
                     CRGHGRVRMQNGIFSIQQACPRCGGSGRIVEKPCAHCHGEGRVEETRTLAVKVPAGVD
                     NGDRIRLSGQGEAGPSGTPAGDLYVEVHVREHAIFQRDGTDLYCEVPIRFSQAALGAQ
                     LPVPTLEGEVPIAIPPETQTGQTFRLRGRGVKSVRSGRPGDLICRVVVETPVRLTKQQ
                     RELLEQLEASFAADQASEHTPRAKNWVDGVKQFWSRVTS"
     gene            2221..>2812
                     /gene="dapB"
                     /locus_tag="VFM52_00880"
     CDS             2221..>2812
                     /gene="dapB"
                     /locus_tag="VFM52_00880"
                     /EC_number="1.17.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007080699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008839 - 4-hydroxy-tetrahydrodipicolinate
                     reductase [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate reductase"
                     /protein_id="HET8763752.1"
                     /translation="MSTKPIRLAVNGAAGRMGLALATLLHGDARFELVHAVGSPRSTQ
                     AGHPVWPDRPLCFATDWSAAPAALDVVVDFSSPAGLVAALDFCLAHGVALVTGSTGLD
                     AGLAARLDAAAARIPLLRAANFSLGVAVLTHLLRDAAASLHDWDLEIIEAHHGRKQDA
                     PSGTALALGAVAAQARGTTLADAAVYAREGHTGARRD"
BASE COUNT          465 a          910 c          999 g          438 t
ORIGIN      
        1 tcgagatcaa ggccggctcg ggcctgtccg acgaggaaat ccagcgcatg gtcgccgatg
       61 ccgaggcgaa caaggaagag gacaagaagt tccacgagct ggtcgccacc cgcaacaagg
      121 ccgaccagct ggtgcacgcc acccgcagcg cgctgaagga gcatggcggc aaggtcggcg
      181 cgcagatcgg cggcatcgaa agcgcgctgt ccgacctgga aaaggtcaag gatggcgacg
      241 acaaggacct gatcgagtcg aagatcacca agctcgaaca ggtggcgcag gcgctctacg
      301 ccgcggcgca gggcggtgct ggtgctgccg gtggcgaaca gccggcgggc ggcgggcagg
      361 gccaggccaa gccggccgac gacgtcgtcg atgccgagtt caccgaggtc aagaacgacg
      421 gcaagtcggc ttgatcgcgg gttgatccgc aacgagcgcc gcagattgcg gcgctcgtcg
      481 tttccgcggg agggcggacg atgggcaagg ggcggctcga agccttcagc gacggcgtgc
      541 tggcgatcat catcaccatc atggtgctgg acctgaaagt accgcacggc gccgacctcg
      601 ccgcgctcgt tgcgcagtgg cccgccttcc tcagctacgt cttgagtttc gtgtacgtcg
      661 gcatctactg gaacaaccac caccatttca tgcacgccgc gcagcacgtg agcggcgcgg
      721 tgctgtgggc caacctgcac ctgttgttct ggctgtcgct gctgccggtg gcgaccggct
      781 ggatgggcga gaaccagttc gcgccgctgc cggtggcggt gtacggcggc gtgctgctgt
      841 tgtgcgcact ggcctggcaa ccgttccagc gcacgctcat ttcggcgaac ggcggccgtg
      901 cgtcgctgct cgcacaggca gtgggcgcgg actggaaagg ccgcctcgcc gtcgccatgt
      961 acctgacagg cattgccgtg gcgttcgtcg cgccatggct ggcctgcctt ctttatgcca
     1021 cggtggctgc gatctggttc ctgcctgatc ggcgcatcga atcgcggatc aagcaatgag
     1081 caagcgtgat tactacgaag tcctcggcgt cgaacgcgac gcctccgagc cggagctgaa
     1141 gaaggcgttc cgccggctgg cgatgaagta ccacccggat cgcaaccccg gcgacccgac
     1201 ggcggcggag aaattcaagg aggccaagga ggcctacgaa gtcctcgccg acgcgcagaa
     1261 gcgcgcgctc tatgaccagt acggtcatgc ggcgttcgag aacggcgccg gcgggcgtgg
     1321 tggcgccggg ttcggcgaca tgggcgatat ctttggcgac atctttggcg acatcttcgg
     1381 aggcggccac gggcgccagc agcgccgtgg cgccgacctg cgctacatcc tcgaactcga
     1441 tctcgaggag gccgtgttcg gcatcgagaa gaagatcgag attccgaccc aggtcaattg
     1501 ccagtactgc aacggcagcg gttccgcgga cggcaagacc agcacctgcc cgacctgccg
     1561 cgggcatggt cgcgtgcgca tgcagaacgg catcttctcg atccagcagg catgcccgcg
     1621 ctgcggtggt tccgggcgca tcgtggagaa gccctgcgcg cattgccacg gcgaagggcg
     1681 cgtggaggaa acccgcacgc tggcggtgaa ggtgcccgcc ggtgtcgaca acggcgatcg
     1741 cattcgctta tcggggcagg gcgaggcggg tccgagtggc acgccggccg gcgacctcta
     1801 cgtcgaggtg cacgtgcgcg agcacgcgat tttccagcgc gacggcaccg acctgtattg
     1861 cgaggtgccg atccggttct cgcaggccgc gcttggcgcg cagctgcccg tgcccacgct
     1921 cgaaggcgaa gtgccgatcg cgattccgcc ggaaacccag accgggcaga cgttccggct
     1981 gcgcggccgc ggggtcaaat cggtacgcag cggacgcccc ggcgacctga tctgccgcgt
     2041 cgtggtggag acgccggtgc ggctgacgaa acagcaacgc gagctgctcg aacagcttga
     2101 agccagcttt gccgccgatc aggcttccga acacacgccg cgcgccaaga actgggtgga
     2161 tggcgtcaag caattctggt cgcgcgtcac gtcgtgaacc ttgtccaggg gactcgcagc
     2221 atgagcacca agccgattcg tctagccgtg aacggtgccg ccgggcgcat ggggctggcc
     2281 ttggccacgt tgctgcacgg cgatgcgcga ttcgaactgg tgcatgcggt gggatcgccg
     2341 cgttccaccc aagccgggca tccggtgtgg ccggatcggc cgctgtgctt cgccaccgac
     2401 tggtccgccg cgcccgctgc gctcgatgtg gtcgtcgact tcagcagccc cgcgggactg
     2461 gtggccgcgc tggatttctg cctcgcccac ggcgtggcac tggtgaccgg ctcgaccggg
     2521 ctcgacgctg ggttggccgc gcgcctcgat gcggcggccg cgcgcattcc gttgctgcgc
     2581 gcggcgaact tcagccttgg cgtggcggtg ctgacgcatc tgctgcgcga cgctgcggcg
     2641 tcgctgcatg actgggatct ggagatcatc gaggcccatc acggacgcaa gcaggatgcg
     2701 ccgtccggca cggcgctggc actgggcgcc gtggccgcgc aagcacgcgg cacgacgctg
     2761 gcggatgccg cggtgtacgc ccgcgagggc cacaccggcg cgcgtcgcga cg
//
LOCUS       DASSVL010000052         2498 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_212860, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000052 DASSVL010000000
VERSION     DASSVL010000052.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2498)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2498)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2498
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_212860"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..450
                     /locus_tag="VFM52_00885"
     CDS             <1..450
                     /locus_tag="VFM52_00885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007510386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PqiC family protein"
                     /protein_id="HET8763753.1"
                     /translation="QVDVPQLVVRDGGQGMQLLDGQRWIAPLGDEIRSALSADLAHAL
                     GVPDLRGLPANDAPRLRIKLDVRRFESVPGQRVAIDAAWSLHRTGDGSQPAFACTSRI
                     SETVGAGYDALVAGHQQALAALATRIAVAARAYEAGGTPRCDDAAAP"
     gene            510..>2498
                     /gene="leuS"
                     /locus_tag="VFM52_00890"
     CDS             510..>2498
                     /gene="leuS"
                     /locus_tag="VFM52_00890"
                     /EC_number="6.1.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008268353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004823 - leucine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006429 - leucyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="leucine--tRNA ligase"
                     /protein_id="HET8763754.1"
                     /translation="MQDTQTPSDYQPQAVEAAAQGYWRAQHAYEVKEDPARPKFFCLS
                     MLPYPSGKLHMGHVRNYTIGDVISRYQRMQGRNVLQPMGWDAFGLPAENAAIKHHTAP
                     AKWTYANIEHMREQLQALGYAIDWSREFATCRPEYYRWEQLMFTRLLKKGLAYRKHSV
                     VNWDPVDQTVLANEQVVDGRGWRSGAVVEKREIPQWFLRITDYAQELLDGLDTLPGWP
                     DAVKTMQRNWLGRSEGLEIRFAVDGEAEPLTVFTTRPDTLMGVTFVSIAGEHPLAVKA
                     AQGNPQLAAFLAELKHGGVSEAELETQEKRGMATGLYAIHPITGDKVPVWVANFVLSG
                     YGTGAVMAVPAHDERDFAFATKYGLPMKQVIACGNQTWSADAWQEWYGDKTRADLHVV
                     NSGELDGKNYHDAFEYLAAKLESEGTGRRRVNWRLRDWGVSRQRYWGCPIPVIYCSKC
                     DVVPVPEDQLPVVLPEDVAFSGVQSPIKADPAWRKTTCPQCGGPAERETDTFDTFMES
                     SWYYARYTSPGAQAQIDERANYWLPVDQYIGGIEHAIMHLLYFRFYHKLLRDAGMVHS
                     DEPAQNLLCQGMVIAETFYRDHADGSKDWINPAAVEVRRDDKAHVVGAVLKADGKPVA
                     IGGTEKMSKSKNNGVDPQAMVGKYGADTVRLFSMFAAPP"
BASE COUNT          427 a          884 c          847 g          340 t
ORIGIN      
        1 caggtcgacg tgccgcaact ggtggtgcgc gacggcgggc agggcatgca gctgctcgat
       61 ggccagcgct ggatcgcgcc gctcggcgac gagatccgca gcgcgctgtc cgccgacctc
      121 gcgcacgcgc tcggcgtgcc ggacctgcgc ggcctgccgg ccaacgacgc gccgcgcctg
      181 cgcatcaagc tcgacgtgcg ccgcttcgag tcggtgcccg gccagcgggt ggcgatcgac
      241 gccgcgtgga gcctgcaccg caccggtgac ggcagccagc ccgcgttcgc ctgcaccagc
      301 cgcatcagcg aaaccgttgg cgccggctac gacgccctcg ttgccggcca tcagcaggcc
      361 ctcgccgccc tcgccacccg catcgccgtc gccgcgcgcg cctacgaggc cggcgggacg
      421 ccacggtgcg atgacgcggc cgcgccctga atccccgcgt tgccacctgc taccctgccc
      481 agtttgcata accgtacgac cccgccacca tgcaagacac ccagactccc agcgattacc
      541 agccgcaggc ggtggaagcc gccgcgcagg gctactggcg cgcgcagcac gcctatgagg
      601 tgaaggaaga cccggcgcgg ccgaagttct tctgcctgtc catgctgccg tacccgtcgg
      661 gcaagctgca catggggcac gtgcgcaact acacgatcgg cgacgtgatc agccgctacc
      721 agcgcatgca gggccggaac gtgctgcagc cgatgggctg ggacgcgttc ggcctgcccg
      781 ccgagaacgc cgcgatcaag caccacaccg cgccggccaa gtggacctac gccaacatcg
      841 agcacatgcg cgagcagctg caggcgcttg gctacgcgat cgactggagc cgcgagttcg
      901 ccacctgccg cccggagtac taccgctggg aacagctgat gttcacccgg ctgctgaaga
      961 agggcctcgc ctaccgcaag cacagcgtcg tcaactggga cccggtcgac cagactgtgc
     1021 tggcgaacga gcaggtcgtc gacggccgcg gctggcgctc cggcgcggtg gtggagaaac
     1081 gcgagatccc gcagtggttc ctgcgcatca ccgactacgc gcaggaactg ctcgacggcc
     1141 tggacacgct gcccggctgg ccggacgcgg tgaagaccat gcagcgcaac tggctcggcc
     1201 gcagcgaggg gctggaaatc cgcttcgcgg tcgacggcga ggccgagccg ctgacggtgt
     1261 tcaccacacg cccggacacg ctgatgggcg tgacgttcgt gtccatcgcc ggcgagcatc
     1321 cgctggcggt gaaggcggcg cagggcaacc cgcagctcgc cgcgttcctc gccgagctga
     1381 agcacggcgg cgtctccgag gccgagctgg aaacccagga aaagcgcggc atggccaccg
     1441 gcctgtacgc catccacccc atcaccggcg acaaggtgcc ggtgtgggtc gccaacttcg
     1501 tgctctcggg ctacggcacc ggtgcggtga tggcggtacc ggcgcacgac gagcgcgact
     1561 tcgcgttcgc cacgaaatac ggcttgccga tgaagcaggt catcgcctgc ggcaaccaga
     1621 cctggtccgc cgacgcgtgg caggagtggt acggcgacaa gacgcgcgcc gacctgcacg
     1681 tggtgaattc cggcgaactg gacggcaaga attaccacga cgccttcgaa taccttgccg
     1741 cgaagctcga atccgaaggc accggccggc gccgggtgaa ctggcggctg cgcgactggg
     1801 gcgtgtcgcg ccagcgctac tggggctgcc cgatcccggt gatctactgc tccaagtgcg
     1861 acgtggtgcc ggtgccggaa gaccagctgc cggtggtgct gcccgaggat gtcgcgtttt
     1921 ccggcgtgca gtcgccgatc aaggccgatc cggcatggcg caagaccacc tgcccgcagt
     1981 gcggcggccc ggccgagcgc gagaccgaca ccttcgacac cttcatggag tccagctggt
     2041 actacgcgcg ctacaccagc cccggcgcgc aggcgcagat cgacgaacgt gcgaactact
     2101 ggctgccggt ggaccagtac atcggcggca tcgagcacgc gatcatgcac ctgctgtact
     2161 tccgcttcta tcacaagctg ctgcgcgacg ccggcatggt gcactcggac gagccggcgc
     2221 agaacctgct gtgccagggc atggtgatcg ccgagacgtt ctaccgcgac cacgccgacg
     2281 gctcgaagga ctggatcaac ccggccgcgg tggaggtccg tcgcgacgac aaggcccacg
     2341 tcgtcggcgc ggtgctcaag gccgatggca agccggtcgc gatcggcggc accgagaaga
     2401 tgtccaagtc gaagaacaac ggcgtcgacc cgcaggcgat ggtcggcaag tacggcgccg
     2461 acaccgtgcg cctgttctcg atgttcgccg cgccgccg
//
LOCUS       DASSVL010000053         2263 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1244193,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000053 DASSVL010000000
VERSION     DASSVL010000053.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2263)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2263)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2263
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1244193"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..308)
                     /locus_tag="VFM52_00895"
     CDS             complement(<1..308)
                     /locus_tag="VFM52_00895"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HET8763755.1"
                     /translation="MLLAEDDPVSRAFLAEGIRACGAELTDCGDGDAALRLARARVFD
                     LLILDHHLPGRNGDAVLAALRGDSGAASRSAPAIATSAARDAEAAALLQAGFVEVLPK
                     P"
     gene            476..>2263
                     /locus_tag="VFM52_00900"
     CDS             476..>2263
                     /locus_tag="VFM52_00900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8763756.1"
                     /translation="MRVQAESLVLPGVTLTGVQMDASLGADGRPQLTLTAAKVSVPAL
                     GWRDVALDLKGEPRQAGGNAWKFTGHVATRRAPGGALAGANLVIVYDPDGGTLAVDVQ
                     QGKSALSALMPLDQTTHVQMTLAALPLTWLRGVLASAWPDGRLNGGEVAGTVALDLAS
                     GGTRISGRVDVAGISLDSKAGTVAAQNLDATGAFRIENGPVSTSAMFDGSLRGGQMLL
                     GPLYAQLPSHPASLHVSATAGPAGIAIDSLDFDDRDALRVSGSLGFDRKGAIAKLDLT
                     RFAATFPATYVRYGTTFVQNLTGFAQLETSGAIAGSLRLDGGELKALDLTAENVSMDS
                     HGGSLAIAGLDGRIDWRANASRPATTLKWDALAMYRIAFGPARLDLEDASGALTLRAP
                     VTTSLLGGSFQLSRLVWRPDAGKAKQLSAAFAVTDVDLPQLCKAFGWPAFGGKLGGAV
                     PDLSYRGDELVFGGGLSLDVFGGSVSVTNLGMLHPLGSTPRLAADIDMRQLDLAQLTG
                     VFDFGEITGRLDGTIDGLELVNWNPVSFKAKLTADSGGKISQHAIKSLTEVGGGGIAG
                     GLQSIALRVFKTFGYSRIGLSCTLVNGVCT"
BASE COUNT          346 a          732 c          822 g          363 t
ORIGIN      
        1 ggtttcggca gcacttcgac gaaccccgcc tgcagcagcg ccgcggcctc cgcgtcgcgc
       61 gcggcgctgg tggcgatggc cggtgccgaa cgcgaagccg cgccggaatc accgcgcaac
      121 gcggccagca cggcatcacc gttccggccg ggcaggtgat ggtcgaggat cagcaggtcg
      181 aagacccgtg cgcgcgccag ccgcagcgcc gcgtcgccat cgccgcaatc ggtgagttcg
      241 gcaccgcagg cgcggatgcc ctcggccagg aatgcgcggc tgaccggatc gtcttcggcc
      301 aggagcacct gaaaacgcgt ggcggcggca ggtcccaagc tctcgttggc atccattcgg
      361 acgtgggctg gcacaatcgg gccagtcata gcggaaaagg gttcccgtga caagttggcg
      421 tcggtggctg gtagcggcgt gtctgctgct cgcgtgcgca tgcgcgcggg cggccgtgcg
      481 cgtgcaggcc gagtcgctgg tgctgcccgg tgtcacgctg accggcgtgc agatggatgc
      541 atcgctcggc gccgacggac ggccgcagtt gacgctgacg gccgccaagg tgtcggtgcc
      601 ggcgctcggg tggcgcgatg tcgcgctcga cctgaagggc gaaccgcgac aggcgggcgg
      661 caatgcctgg aagttcaccg gccacgtcgc gacccggcgt gcgcccggcg gagcgctggc
      721 cggcgccaac ctggtgatcg tctacgaccc cgatggcggt acgctggcgg tggatgtaca
      781 gcagggcaag agcgcactca gcgcgctgat gccgctggac cagaccacgc acgtccagat
      841 gacgctggcg gcgctgccgc tgacgtggct gcgcggcgtg ctggcttcgg cgtggccgga
      901 cgggcggctc aacggcggcg aggtggccgg aaccgtggcg ctggatctgg ccagcggcgg
      961 cacgcggatt tccggacgcg tcgatgtcgc cggcatttcg ctcgacagca aggccggcac
     1021 cgtcgcggcc cagaatctgg atgccaccgg ggccttccgg atcgagaacg gaccggtttc
     1081 caccagcgcg atgttcgatg ggtctctgcg tggcggacag atgctgctgg ggccgctgta
     1141 cgcgcagttg ccttcgcacc ccgccagctt gcacgtatcc gccacggcgg ggccagcggg
     1201 tatcgcgatc gactcgctcg acttcgatga ccgcgatgcg ctgcgcgtgt cggggagcct
     1261 cggtttcgac cgcaagggcg cgattgccaa actcgacctc acccgtttcg cggcgacgtt
     1321 ccccgcaacg tatgtgcgct acggcaccac gttcgtgcag aaccttaccg ggttcgcgca
     1381 actggagaca tcgggtgcca tcgccgggtc gctccgcctc gacggcggcg aattgaaggc
     1441 gctcgacctc accgccgaga acgtgtcgat ggacagccac ggcggcagtc tcgcgatcgc
     1501 aggactcgat ggcaggatcg actggcgggc gaacgcgtcg cgtccggcga ccacgttgaa
     1561 atgggatgcg ctggcgatgt atcgcatcgc gttcgggccg gcccgacttg atctcgagga
     1621 tgcatccggg gcgttgaccc tgcgcgcgcc ggtgacgacc tcgttgctgg gcggttcgtt
     1681 ccagctcagc cgactggtat ggcggcccga tgccgggaaa gccaaacagt tgtcggcggc
     1741 gtttgccgtc accgatgtcg acttgccgca gttgtgcaag gcgttcggct ggccggcatt
     1801 cggtggcaag ctcggcggcg cggtgccgga cctgagctac cggggtgacg agctggtatt
     1861 cggcggcggc ctgtcgctgg atgttttcgg cggctcggtg agcgtgacca acctcggcat
     1921 gctgcatccg ctgggcagca cgccgcgcct cgccgcagac atcgacatgc ggcaactgga
     1981 tctggcgcaa ctgacgggcg tgttcgactt cggcgaaatc accgggcgcc tcgacgggac
     2041 aatcgatggg ctcgaattgg tcaactggaa cccggtttca ttcaaggcga agctgaccgc
     2101 cgacagcggc ggcaagatca gccagcacgc catcaagagc ctcaccgaag tcggtggcgg
     2161 cggcatcgcg ggcgggctgc aaagcatcgc gctgcgcgtg ttcaagacct tcggctattc
     2221 gcggatcggg ctgagctgca cgctggtgaa cggcgtctgc acg
//
LOCUS       DASSVL010000054         2101 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1046475,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000054 DASSVL010000000
VERSION     DASSVL010000054.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2101)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2101)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2101
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1046475"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..704
                     /locus_tag="VFM52_00905"
     CDS             <1..704
                     /locus_tag="VFM52_00905"
                     /EC_number="1.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007805011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004073 - aspartate-semialdehyde
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0016620 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, NAD or NADP as
                     acceptor [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0008652 - amino acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="aspartate-semialdehyde dehydrogenase"
                     /protein_id="HET8763757.1"
                     /translation="LVVSEVNPHAIAGYTTHGIIANPNCSTMGMLVALAPIHHAVGIQ
                     RINVATYQSVSGAGRSGMEELGRQTADLLNFKEAKPSKFPKQIAFNVIPHIDEFQPNG
                     YTKEEMKMVWETRKILEDESIQVNPTAARVPVFYGHSEAVHIETRDKITAEQARALLK
                     KADGVVVMDERKAGGYPTPVGDVAGKDPVFVGRIREDISCERGLDLWVVSDNIRKGAA
                     LNAVQVAEKLIEDYL"
     gene            701..988
                     /locus_tag="VFM52_00910"
     CDS             701..988
                     /locus_tag="VFM52_00910"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8763758.1"
                     /translation="MKYALAVLALAGTLAATALPAQTPATRGAKPRHAAKTTVERQRA
                     TVKQLEHDVAGQEAGSRDAARRLQQKDAEIAELQRQLRAVQPAAARSSAGH"
     gene            1162..>2101
                     /locus_tag="VFM52_00915"
     CDS             1162..>2101
                     /locus_tag="VFM52_00915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007805013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FimV/HubP family polar landmark protein"
                     /protein_id="HET8763759.1"
                     /translation="MKLPLLIALALGSGQALALDLGQIQVKSALGQPLLAEIPVRQAT
                     PAELQKLSVQLASGDEFARAGVSAGRPAIPLHFEVVNGDDGHKVIRITSQAAVNDPFL
                     DLLVEINGGAGKSVREFTILLDPPGSNPAPVAARPAAPSRPTAPATHAAVPARAAGDQ
                     VASGHFGPVERGQTLSAVARRTAPAGVDVNQMMLALKQANPEAFYRDNINALKAGAVL
                     RVPGKADAEAVAAAAAAAQVRQQNGDWRSARVSSSPVTVADAGTRGGTSSSPTTTAAP
                     KGDHLALVPAAKQGAKAAAAGNSDQGAASKQDLMRSQ"
BASE COUNT          376 a          694 c          744 g          287 t
ORIGIN      
        1 cgctggtggt gtccgaggtc aacccgcacg cgatcgccgg ctacaccacg cacggcatca
       61 tcgccaaccc gaactgctcg acgatgggca tgctggtcgc gctggcgccg atccaccatg
      121 cggtgggcat ccagcgcatc aacgtggcga cctaccagtc ggtatccggc gccgggcgct
      181 cgggcatgga ggagctgggc cggcagaccg ccgatctgct caacttcaag gaggcgaagc
      241 cgtcgaagtt tcccaagcag atcgcgttca acgtcatccc gcacatcgac gagttccagc
      301 cgaatggcta caccaaggaa gagatgaaga tggtgtggga gacgcgcaag atcctcgagg
      361 acgagtcgat ccaggtgaac ccgacggcgg cgcgcgtgcc ggtgttctac gggcattccg
      421 aggcggtgca catcgagacg cgcgacaaga tcaccgccga gcaggcgcgt gcgctgctga
      481 agaaggccga cggcgtggtg gtgatggacg agcgcaaggc cggcggctat cccacgccgg
      541 tgggcgacgt ggccggcaag gacccggtgt tcgtcggccg catccgcgag gacatctcct
      601 gcgaacgcgg gctcgacctg tgggtggtct ccgacaacat ccgcaagggc gccgcgctca
      661 acgcggtgca ggtggccgag aagctgatcg aggactacct gtgaagtacg cgctcgccgt
      721 gctcgccctg gccgggacac tggccgccac cgcgctgccg gcgcagacgc cggcgactcg
      781 cggcgccaag cccaggcacg ccgcgaagac gaccgtggag cgccagcgcg ccacggtcaa
      841 acagctggaa cacgacgtgg ccggccagga agccggcagt cgtgatgcgg cacggcgcct
      901 gcagcaaaaa gacgcggaga ttgcagagtt gcagcgccag ttgcgggccg tgcagcccgc
      961 ggcggcgaga tccagcgccg gccattgagc cgttgccccg atctggaatg cgtggcagca
     1021 atgcgctgca agtcaccgct gcagctattg ttgatcggcc ggcatctaac taaagtggcg
     1081 catcgtttgg gtgaagcgcc gccatggtga cgggctagcc aggggccacg gcttgtttgg
     1141 ggagacgtga tgaagcgttc gttgaaactg ccattgctca tcgcactggc tctaggcagc
     1201 ggccaggcct tggcgctcga tctgggccag atccaggtga aatcggcact cggccaacct
     1261 ctgctggccg aaattccggt gcggcaggca accccggccg aactgcagaa actcagcgtg
     1321 caactggctt ccggcgacga attcgcgcgt gcgggcgtga gtgccgggcg cccggcgatt
     1381 ccgctgcact tcgaggtcgt caacggtgac gatggccaca aggtcatccg catcaccagc
     1441 caggcggcgg tcaatgatcc gttcctcgac ctgctggtcg agatcaatgg cggcgccggc
     1501 aagagcgtgc gcgagttcac catcctgctc gacccgcccg gcagcaaccc ggcgccggtg
     1561 gcggcgcgtc ccgcggcgcc gagtcgcccg acagcgccgg ccacgcacgc ggcagtgcca
     1621 gcgcgggcag ccggtgatca ggttgccagt ggccacttcg gtccggtcga acgcggccag
     1681 accttgtcgg cggtggcccg gcgcacggcg ccggccggcg tcgacgtgaa ccagatgatg
     1741 ttggccctga agcaggccaa tcccgaggcg ttctatcgtg acaacatcaa tgcgctgaaa
     1801 gccggcgccg tgctgcgcgt gccgggcaag gccgatgccg aggcggttgc cgcggcggcc
     1861 gccgcggcgc aggtgcgcca gcagaacggc gactggcgca gcgccagggt gagcagttcg
     1921 ccggtgaccg tggccgacgc cggcacgcgc gggggcacgt ccagctcgcc caccaccacc
     1981 gccgcgccca agggcgacca cctggcgctg gttccggcgg ccaagcaggg tgccaaggcc
     2041 gcggcggccg gcaacagcga tcaaggagcg gccagcaagc aggatttgat gcgcagccag
     2101 g
//
LOCUS       DASSVL010000055         3323 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_961579, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000055 DASSVL010000000
VERSION     DASSVL010000055.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3323)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3323)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3323
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_961579"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2290)
                     /locus_tag="VFM52_00920"
     CDS             complement(<1..2290)
                     /locus_tag="VFM52_00920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007508411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cellulase"
                     /protein_id="HET8763760.1"
                     /translation="MWGPGSGRKFRSEAGHPASGALPAARTAASHPGFFGRAARWRRP
                     RLGLLGNLAAAAGLLALALGVHAGQPDAVAYRFTGVRIGGGGYVSGLLFHPSVRGLAY
                     ARTDVGGAYRWDQGSGRWQPLTDWITAKDENLLGIDSLAVDPSDPQWLYLAAGTYTSA
                     QAGNAAILRSHDQGRSFQRVDLPFPLGGNELGRGNGERLAVDPNDGRVLFLGSRTAGL
                     WRSDDHGAHWAKVDSFPAVATSPAASASNAWRTQPIGIVFVVFDPASGRRSQPTPVIY
                     AGVSTRQTSLFRSTDGGRSWSAVAGQPVGLRPSHMHRASDGDYYLSYGDEPGPDTMHD
                     GALWRWQPERGRWTDITPIPNQSRLGPGKSAGFGWGDVAVAPSNPAVLIASTHHLYTP
                     HDLLFRSTDRGAHWSEVFAHSVFDRSGAPWTVEHRPHWMTTVAIDPFDANHVMFVTGY
                     GVWATRDMGQMDANGEVHWTFADRGLEETVPLGLISPPQGAHLLSALGDLDGYRHDDL
                     DVAPMQFAAPPRYANSESIDYAGQRLQRIVRSGYLRDPFGPAVRAAWSDDGGRHWQAL
                     ASEPPEGEGAGSIAWTADGAGVLWAPRNAKHAWLTHDLGQHWQVATGLPGGVKVLGDR
                     VDARRLYAVDPRSGALYASRDGGATFTPLAGRLGAAAQGHDRVQLQAAPDAAGVLYVA
                     ARDLPLMRGDDTGRAQQVLPGITGVDAFGFGKSAPGQHSPVLFVAGRYGPQQGMFRSV
                     DDGQHWQRIIDDAHQYGRVTHLT"
     gene            complement(2293..>3323)
                     /locus_tag="VFM52_00925"
     CDS             complement(2293..>3323)
                     /locus_tag="VFM52_00925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007508413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HET8763761.1"
                     /translation="VNPDQAFAPYLGAGEPTPISARNEYTDVLPSLNVKWEFAPNLVT
                     RFAFSKAIARPDFSQMQAYQILNAAVLSGYTPPAGTTTLPLDKLTLTGSSNSNPYLTP
                     MKANQFDLSLEWYFDPDRGGMAWINLFHKGLSDYFRNESRFVTYPGVDGNNYQYLITR
                     PVNVGTATIDGAELGWNQFFDFLPIKGFGMSANYTYIRSRTHLPNDTTAVPMDTDGSG
                     YGSLPADGLSRDSLNIAGFYEHGPWQIRLAYNWRSQYLLSIGPNGYNGTDNNIPWKLP
                     VFADAYGQLDGSVFYAFNQHVKLGLEMNNLNNAEQRTIMYQNGAGKHVTSWYVNDTRY
                     ALTMRVSF"
BASE COUNT          523 a         1129 c         1152 g          519 t
ORIGIN      
        1 cggtgaggtg ggtgacgcgg ccgtactggt gggcgtcgtc gatgatgcgc tgccagtgct
       61 gcccgtcgtc gaccgaacgg aacatgcctt gctgcggccc ataccggccc gccacaaaca
      121 gcacgggcga atgctggccc ggtgctgatt tgccgaaacc aaacgcgtcg acgccggtga
      181 tgccgggcag cacctgctgc gcgcggccgg tgtcgtcgcc gcgcatcagc ggcaggtcgc
      241 gtgcggcgac atagagcacg cccgccgcat caggcgccgc ctgcaattgc acacggtcgt
      301 gaccctgcgc ggcggcaccg agtcggcccg caagcggcgt gaacgtcgcg ccgccatcgc
      361 ggcttgcata cagcgcgccg ctgcgcggat cgacggcata caaacggcgc gcgtcgacgc
      421 gatcgcccag caccttcacg ccgcccggca aacccgtcgc cacctgccag tgctggccaa
      481 ggtcgtgcgt gagccaggcg tgcttcgcgt tgcgcggcgc ccacagcacg cctgcgccgt
      541 cggccgtcca cgcgatgctg ccggcgccct cgccttccgg cggttcgctg gccagcgcct
      601 gccaatgccg gccgccgtcg tccgaccagg ccgcgcgcac ggcgggcccg aacggatcgc
      661 gcaggtagcc gctgcgcacg atgcgctgca ggcgctgccc ggcgtagtcg atggattcgc
      721 tgttggcgta gcgtggcggc gcggcgaact gcatcggcgc cacgtcgaga tcgtcgtggc
      781 ggtagccgtc cagatcaccc agcgcgctca acagatgcgc gccctgcggc gggctgatca
      841 ggccaagcgg cacagtctcc tccaggccgc gatcggcgaa cgtccagtgc acctcgccgt
      901 tggcatccat ctggcccatg tcgcgcgtgg cccacacgcc gtagccggtg acgaacatca
      961 cgtggttggc gtcgaacgga tcgatcgcca cggtggtcat ccagtgcggc ctgtgctcca
     1021 ccgtccacgg cgccccgctg cggtcgaaca ccgaatgcgc gaacacctcg ctccagtgcg
     1081 cgccgcggtc ggtactgcga aacagcaggt cgtgcggcgt gtagaggtga tgcgtactgg
     1141 cgatgagcac cgccgggttc gacggcgcca ccgcgacgtc gccccagccg aaccccgcgg
     1201 acttgccggg tccgagccgg ctttgattgg ggatgggcgt gatgtcggtc cagcggccgc
     1261 gctccggctg ccagcgccag agagcgccgt cgtgcatggt gtccgggccg ggctcgtcgc
     1321 cgtagctcag gtaatagtcg ccgtcgctgg cgcgatgcat gtggctgggc cgcaagccca
     1381 ccggctggcc cgccaccgcg ctccagctgc ggccgccgtc ggtggaccgg aacaggctgg
     1441 tctgccgggt ggagacaccg gcatagatca ccggcgtcgg ctggctgcgc cgcccgctgg
     1501 ccggatcgaa caccacgaac acgatgccga tgggctgcgt gcgccacgcg ttgctggcgc
     1561 tggccgccgg cgaggtcgcc acggccggga agctgtccac cttcgcccag tgcgcgccat
     1621 gatcgtcgct gcgccacagg ccggccgtgc gcgaaccgag aaacagcacg cggccgtcgt
     1681 tcggatccac cgccagccgc tcgccgttgc cgcgccccag ctcgttgcca ccgagcggaa
     1741 acggcaggtc gacgcgctgg aagctgcgcc cctggtcgtg cgagcgcagg atggcggcgt
     1801 tgcccgcctg cgcgctggtg tacgtgcccg cggcgaggta caaccactgc ggatcggacg
     1861 ggtcgaccgc aaggctgtcg atgcccagca ggttttcgtc cttcgccgtg atccagtcgg
     1921 tcaacggctg ccagcgccca gacccttgat cccagcgata ggcaccgccg acgtcggtgc
     1981 gcgcgtaggc caggccgcgc accgacgggt gaaacagcaa accggagacg tagcccccgc
     2041 cgccgatgcg cacgccggtg aagcggtagg cgacggcgtc aggctggccg gcgtggacac
     2101 ccagcgcgag ggccagcagg ccggcggcgg cagcgaggtt gccgagcagg ccgaggcgag
     2161 gccttcgcca ccttgccgcc ctcccgaaaa acccgggatg cgacgcggcc gtccgggcgg
     2221 ccggcagggc acccgatgcc ggatgccctg cctcggaacg gaatttccta ccgctgcctg
     2281 gcccccacac gatcagaacg acacgcgcat cgtcagcgca taccgggtgt cgttcacgta
     2341 ccaggacgtg acgtgcttgc cggccccgtt ctggtacatg atcgtgcgct gctcggcgtt
     2401 gttgaggttg ttcatctcca ggccgagctt cacatgctgg ttgaacgcgt agaagaccga
     2461 gccgtccagc tggccgtagg cgtcggcgaa taccggcagc ttccacggga tgttgttgtc
     2521 ggtgccgttg tagccattcg gaccgatcga cagcaggtac tggctgcgcc agttgtaggc
     2581 cagccggatc tgccacgggc cgtgttcata gaaaccggcg atgttgaggg aatccctcga
     2641 caggccatcc gccggcaggc tgccgtagcc ggagccgtcg gtgtccatcg gcaccgcggt
     2701 ggtgtcgttc ggcaagtggg tcctgctgcg gatgtaggtg tagttcgccg acatgccgaa
     2761 gcccttgatc ggcaggaaat cgaagaactg gttccagcca agctccgcgc cgtcgatcgt
     2821 cgccgtgccg acattcaccg ggcgggtgat caggtactgg tagttgttgc cgtccacgcc
     2881 cggataggtc acgaaccgcg actcgttgcg gaagtagtcg ctcagcccct tgtggaacag
     2941 gttgatccag gccatgccgc cgcggtccgg atcgaagtac cactccagcg acaggtcgaa
     3001 ctggttggcc ttcatcggcg tcaggtacgg gttgctgttg gacgaaccgg tcaaggtcag
     3061 cttgtcgagc ggcaacgtgg tggtgccggc cggcggcgta tagcccgaca gcacggcggc
     3121 attgagaatc tgataggcct gcatctggct gaaatcgggc cgcgcaatcg ccttggaaaa
     3181 ggcaaaacgc gtgaccaggt tgggcgcgaa ctcccacttg acgttcaggc tgggcagaac
     3241 gtcggtgtac tcgttgcggg cgctgatggg agtgggttca cccgcaccaa gataaggcgc
     3301 gaacgcctgg tcgggattaa cca
//
LOCUS       DASSVL010000056         2752 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_71676, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000056 DASSVL010000000
VERSION     DASSVL010000056.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2752)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2752)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2752
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_71676"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..364
                     /locus_tag="VFM52_00930"
     CDS             <1..364
                     /locus_tag="VFM52_00930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007082937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="carbon starvation protein A"
                     /protein_id="HET8763762.1"
                     /translation="VKLKRERFVWVPGVPAVWLVICTLAAGYEKLVGPISFTAAADKY
                     AAALANGQLLAPAKTTAAMQQIITNNRVDMVMTGLFMALVVTMTVVCLRAIIRAWQTN
                     HPTAHEEPYVALADVATP"
     gene            375..569
                     /locus_tag="VFM52_00935"
     CDS             375..569
                     /locus_tag="VFM52_00935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007507233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbdD/YjiX family protein"
                     /protein_id="HET8763763.1"
                     /translation="MNAHLQAFRKWAVQTARLCCGVPDYDTYVHHLREHHPERPIPSY
                     AQFYRERTEARYKGGGGRCC"
     gene            884..>2752
                     /locus_tag="VFM52_00940"
     CDS             884..>2752
                     /locus_tag="VFM52_00940"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HET8763764.1"
                     /translation="MHGANNPVVFGYFTAALLATAAVAFAAGIQFLLVGVRQKSDRTP
                     LAFALLCLCAAVLAAARAGVYVSSTLSGATLALRVVAGSALVAFPLLMSFVAHYTSRR
                     IPRGVFAAAVVLAGVLFWINLWTPFTVLDDALHVGPRLQLPWGESLYGIEGARSFTGH
                     VFYGFSYAVFGWAMYAAMRQFHAGQRLRAALLLVCLTLQLLAVVWAAVSVDTLGMPYP
                     AADAFAFLSFVLLMSLSLVGQMHTHTVQLERASEELRHEATTRVEAELELHHAAWHDA
                     LTDLPNRPRLQQLLRESIAGAERDGHYGALLILDLDNFKTINDSLGHLMGDRVLQAIT
                     DRLLATVPENATVARFGGDEFVVLLDNHADHAARAAAGGMQIAQSLLDGLAPPLTIDR
                     RLLPVSASVGVATFPDAGTRPEDILRRADIALYRAKAAGRHAIRQFQPQMQHDADMRL
                     ELERGLRIAVERGELAVHFQPQVDMHGHLVGAEALLRWHHPELGEIAPATFIPIAEET
                     GLIHAIGTWAIATTCGHLREWRRRDVAFGAKLSVNVSPWQLASARFPAELLAQVRAAG
                     VPPDALTLELTESALLTDFDAARHALDTLSAAGFRLSLDDFGTGYSSLAYLRQLPLD"
BASE COUNT          393 a          992 c          922 g          445 t
ORIGIN      
        1 ggtcaagctg aagcgcgagc gcttcgtgtg ggtgccgggc gtgcccgcgg tgtggctggt
       61 gatctgcacg ctggccgccg gctacgagaa gctggtcggg ccgatcagct tcaccgccgc
      121 cgccgacaag tacgcggcgg cgctggcaaa cggccagctg ctggcgccgg ccaagaccac
      181 cgccgccatg cagcagatca tcaccaacaa ccgcgtggac atggtgatga ccggtttgtt
      241 catggcattg gtcgttacca tgaccgtggt gtgcctgcgt gcgatcatcc gcgcctggca
      301 gaccaaccac ccgaccgcgc acgaggaacc ctacgtggcg ctggccgacg tggcgacgcc
      361 gtgaggaggc aggcatgaac gcgcacctgc aagcgttccg caaatgggcg gtgcaaaccg
      421 cccggttgtg ctgcggcgtg ccggactacg acacctacgt gcaccacctg cgcgaacatc
      481 acccggaacg gccgatcccg agctacgcgc agttctaccg cgagcgtacg gaagcccgct
      541 acaagggcgg cggcggccgc tgctgctgaa cgcacgcagg tagctacgac aacaagggcc
      601 gggatattcc cggcccttgt ctcggcttgc cgggctgaaa cccgctccgc atcgaacccg
      661 cgtcacacat tggcgcaacg tttcgccgtt tcccgtccgg gcgtggtttc atggggcgca
      721 cggcggtagc gatgcggccg catggcaggc cgtgcacacc ggatgatttc ggccgtccga
      781 gcccctatgc tgcgcgagcc aagcgatcct gctggcgttc cacgccagcg ggattctttg
      841 ttttcggact gccgcaaccg acagggtcca gggccgaggt gcgatgcacg gtgcgaacaa
      901 tcccgtagtc ttcggctact tcacggccgc gctgctggcg acggcggcgg tcgcgttcgc
      961 cgcgggcatc cagttcctgc tggtcggcgt gcgccagaag agcgatcgca cgccgctcgc
     1021 gttcgccctg ctctgcctgt gcgccgcggt gctggccgcg gcccgcgccg gggtgtacgt
     1081 gtcctcgacg ctgagcggcg ccaccctcgc cctgcgcgtg gtggcgggat cggcgctggt
     1141 cgccttcccg ctgctgatga gcttcgtcgc ccactacacc agtcgccgca tcccgcgcgg
     1201 cgtgttcgcc gcggcggtgg tgctggcggg cgtcctgttc tggatcaacc tctggacacc
     1261 gttcaccgtg ctcgacgacg cgctgcacgt cggcccgcgg ctgcagctgc cgtggggtga
     1321 gtccctgtac ggcatcgagg gcgcgcgctc gttcaccggc cacgtcttct acgggttcag
     1381 ctatgcggta ttcgggtggg cgatgtatgc cgccatgcgc cagttccacg ccgggcagcg
     1441 gttgcgcgcc gcgttgctgc tggtctgcct gacgctgcag ttgctggcgg tggtgtgggc
     1501 ggcagtgtcg gtggacacgc tgggcatgcc gtacccggcc gccgacgcgt ttgccttcct
     1561 gtcgttcgtg ctgctgatga gcctgtcgct ggtgggccag atgcataccc acacggtgca
     1621 gctcgaacgc gccagcgagg agctgcgcca cgaggcgacc acccgcgtcg aggccgaact
     1681 ggagctgcac cacgcagcct ggcacgatgc gctgaccgac ctgccgaacc gcccgcgcct
     1741 gcagcagctg ctgcgcgagt cgatcgccgg tgccgagcgc gacggccatt acggcgcgct
     1801 gctgatcctc gacctggaca acttcaagac catcaacgac tcgctcgggc acctgatggg
     1861 cgaccgcgtg ctgcaggcca tcaccgaccg cctgctggcc accgtgcccg agaacgccac
     1921 cgtggcccgg ttcggcggcg acgagttcgt ggtgctgctg gacaaccacg ccgaccatgc
     1981 cgcacgtgcg gccgccggcg gcatgcagat cgcgcaaagc ctgctcgatg gcctggcgcc
     2041 gccgctcacc atcgaccgtc gcctgctgcc ggtcagcgcc agcgtcggcg tcgccacgtt
     2101 ccccgatgcc ggcacccgcc ccgaggacat cctgcgccgc gcggacatcg cgttgtaccg
     2161 cgccaaagcc gccgggcgcc acgcgatccg ccagttccag ccgcagatgc agcacgacgc
     2221 cgacatgcgc ctggagctgg aacgcgggct gcgcatcgcg gtcgagcgcg gcgaactggc
     2281 agtgcatttc cagccgcagg tcgacatgca tggccacctc gtcggcgccg aagccctgct
     2341 gcgctggcac cacccggaac tgggcgaaat cgcgcctgcc acgttcatcc cgatcgccga
     2401 ggagaccggc ctgatccacg cgatcggcac ctgggccatt gccaccacct gcggccacct
     2461 gcgcgaatgg cggcgtcgcg acgtcgcctt cggtgccaag ctgtcggtca acgtgagccc
     2521 gtggcagctc gccagcgctc gatttcctgc cgagctgctg gcccaggtgc gcgccgccgg
     2581 cgtaccgccc gacgcgctga cgctggagct gaccgaaagc gcgctgctca ccgatttcga
     2641 cgccgcgcgc cacgccctgg acacgctgtc cgccgccggg ttccgcttgt cgctggacga
     2701 cttcggcacc ggctattcgt cgctcgccta cctgcgccag ctgccgctgg ac
//
LOCUS       DASSVL010000057         2151 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_651018, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000057 DASSVL010000000
VERSION     DASSVL010000057.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2151)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2151)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2151
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_651018"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            121..1119
                     /locus_tag="VFM52_00945"
     CDS             121..1119
                     /locus_tag="VFM52_00945"
                     /EC_number="7.4.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008209614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0033232 - ABC-type D-methionine
                     transporter activity [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0048473 - D-methionine transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine ABC transporter ATP-binding protein"
                     /protein_id="HET8763765.1"
                     /translation="MIRFLDVRKSYRVDGRDVPALAPFSLDIHDGEVFGIIGHSGAGK
                     STLLRLINLLERPSGGRILIGDTYSTALDEAALRAQRRRIGMIFQHFNLLASQTVAAN
                     VALPLRLAGERRRDVIAARVDELLQRVGLAAHAHKYPAQLSGGQKQRVGIARALANRP
                     DILLCDEATSALDPQTTASVLDLLADINRELKLTIVLITHEMDVVRRIADRVAVLDAG
                     QLVETGTVADVFLHPRHATTRRFVGDALPAPDTAPLAGVHGRVLRLTFLGATTMEPVL
                     SRVMRESGLDFNLLAGRIDRIKDLPYGQLTLALDGAHVDAALDQLRAAGITIEELA"
     gene            1116..1802
                     /locus_tag="VFM52_00950"
     CDS             1116..1802
                     /locus_tag="VFM52_00950"
                     /EC_number="7.4.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019465658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033232 - ABC-type D-methionine
                     transporter activity [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0048473 - D-methionine transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine ABC transporter permease"
                     /protein_id="HET8763766.1"
                     /translation="MSAAPLLQELFPNIQDWGELGQACADTLLMLGGSLALTVLIGLP
                     LGVLLYLTGPGQLRARPRTYAITSVVVNILRSVPFIILMIVMMPVTYALVGTKLGVRG
                     AIPPLVIGTAPFFARLVETSLREVSRGVIEAAQAMGASTWQIVRHVLLPEARAGIWAG
                     ITVTAIALVGYTAMGGAIGSGGLGDLAYRYGYLSYKSDYMLVTVVLLVILVQVLQVAG
                     DRIVARYKQR"
     gene            1868..>2151
                     /locus_tag="VFM52_00955"
     CDS             1868..>2151
                     /locus_tag="VFM52_00955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007806289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MetQ/NlpA family ABC transporter
                     substrate-binding protein"
                     /protein_id="HET8763767.1"
                     /translation="MNWLAPALSILLLAGCAAPKEDADTLTVGATAVPHAEILKAVQP
                     QLAKEGVKLKIKVFADYVQPNLQVAEKSLDVNYFQTAPYLAAFNHEHGTHL"
BASE COUNT          337 a          789 c          685 g          340 t
ORIGIN      
        1 cacaccgtcg agatcggttg cgctgaaatc ccagatgctg tccatcgaac cctccggcat
       61 ggccgcatgg acgtccatgc gaaccgctag aatgatgcac cgtttcgcag ccagaccacc
      121 gtgatccgct tcctcgacgt acgcaagtcc taccgcgtgg acggccgcga cgtgccggcg
      181 ctcgcaccgt tcagcctcga catccacgat ggcgaggtgt tcggcatcat cggccactcc
      241 ggtgccggca agtcgacgct gctgcgcctg atcaacctgc tcgaacgccc gagtggcggc
      301 cgcatcctga tcggcgacac ctacagcacc gcgctggacg aggcggcgct gcgcgcgcag
      361 cgccggcgca tcggcatgat cttccagcac ttcaacctgc tcgcctcaca gaccgtggcg
      421 gcgaacgtgg cgctgccgct gcggctggcc ggcgaacgcc ggcgcgacgt catcgcggcg
      481 cgcgtggacg aactgttgca gcgcgtcggc ctggccgcgc acgcgcacaa gtacccggcg
      541 cagctttccg gcggccagaa acagcgcgtc ggcattgccc gcgcgctggc caaccgcccc
      601 gacatcctgc tgtgcgacga ggccaccagc gcgctcgatc cgcagaccac ggcctcggtg
      661 ctcgacctgc tcgccgacat caaccgcgag ctcaagctca ccatcgtgct gatcacccac
      721 gagatggacg tggtgcgccg catcgccgac cgcgtcgccg tgctcgacgc cggacagctg
      781 gtggaaaccg gcaccgtcgc cgacgtgttc ctgcacccgc gccacgcgac cacgcgccgc
      841 ttcgtcggcg atgccctgcc cgcgcccgac accgcgccgc tggccggcgt gcacggtcgc
      901 gtgctgcgcc tgaccttcct cggcgcgacc accatggaac ccgtgctcag ccgcgtgatg
      961 cgcgagagcg gcctggattt caacctgctt gccggccgca tcgaccgcat caaggacctg
     1021 ccctacggcc agctcacgct ggcgctcgac ggcgcccacg tcgatgccgc gctggaccag
     1081 ctgcgcgccg ccggcatcac catcgaggag ctggcatgag cgctgcgccg ctgctgcagg
     1141 agctgtttcc caacatccag gattggggcg aactcggcca ggcctgcgcc gacaccctgc
     1201 tgatgctcgg cggctcgctc gcgctcaccg tactgatcgg cctgccgctc ggcgtgctgc
     1261 tgtacctgac cggccccggc cagctgcgcg cacggccgag gacctacgcc atcacgtcgg
     1321 tggtggtgaa catcctgcgc tcggtgccgt tcatcatcct gatgatcgtg atgatgccgg
     1381 tgacctacgc gctggtcggc accaagctcg gcgtgcgcgg cgcgatcccg ccgctggtga
     1441 tcggcaccgc gccgttcttc gcgcggctgg tcgaaacctc gctgcgcgag gtgtcgcgcg
     1501 gcgtgatcga ggccgcgcag gcgatgggcg ccagcacctg gcagatcgtg cgccacgtgc
     1561 tgctgcccga agcgcgcgcc ggcatctggg ccggcatcac ggtgaccgcc atcgccctgg
     1621 tcggctacac cgcgatgggc ggcgcgatcg gctccggcgg cctcggcgac ctcgcctacc
     1681 gttacggcta cctcagctac aaatccgact acatgctggt gaccgtggtg ctgctggtga
     1741 tactggtgca ggtgctgcag gtggccggcg accgcatcgt cgcccgctac aagcagcgat
     1801 gaatcgccgt ttgtggttgg ccgtatggac ggctattctt gccaccccga cgtgaaacgg
     1861 tgacgcgatg aactggcttg ctcctgcgct ttcgatcctg ctgctggctg gctgcgccgc
     1921 gccgaaggaa gacgccgaca cgttgaccgt cggcgccacc gcagtgccgc atgcggaaat
     1981 cctcaaggcg gtgcagccgc aactggcaaa agagggcgtg aaactgaaga tcaaggtgtt
     2041 cgccgactac gtgcagccca acctgcaggt ggccgagaag agcctcgacg tcaactactt
     2101 ccagaccgcg ccctacctcg cggccttcaa ccacgagcac ggcacgcacc t
//
LOCUS       DASSVL010000058         4788 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_919310, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000058 DASSVL010000000
VERSION     DASSVL010000058.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 4788)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4788)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4788
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_919310"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1990
                     /gene="metG"
                     /locus_tag="VFM52_00960"
     CDS             <1..1990
                     /gene="metG"
                     /locus_tag="VFM52_00960"
                     /EC_number="6.1.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019304414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004825 - methionine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006431 - methionyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="methionine--tRNA ligase"
                     /protein_id="HET8763768.1"
                     /translation="DIWVRAQRMMGSEVAYVCADDAHGTPIMLAAEKAGTTPEAFIDG
                     IRQKHAADFAAFGVAFDHYHTTHSDENRELATLIYTRLRDGGYIAKRSIQQLYDPEKQ
                     MFLPDRYIKGTCPKCGAADQYGDNCEVCGATYAPTDLLNPYSVVSGATPVLKDSEHYF
                     FELGKFEALLRDWFAGKRTAGKPVANPSVVAKLHEWLDGGLKDWDISRDAPYFGFPIP
                     DAPGKFFYVWLDAPVGYLASFKALCAKTGLKFDDYLGEGSTAELHHFIGKDIINFHGL
                     FWPAMLHGAHFRTPTALHVNGYLTVNGAKMSKSRGTFIKARTYLDAGLDPEYLRYYFA
                     SLLNDTPVDVDLDLKAFEERVNSHLVGKWVNIASRTQGFVHKFFDGRLVAAFDAERDA
                     LWQALLAQYNGIEALYEGGHFADLARRFVAMADLVNGHIAEKAPWTLAKDAAHRDELH
                     QVCSFALAAFRLLSGLLKPILPATVASAETFLAAPIADFAGARDALHGHTIGKFTPLM
                     ARLDPKHVEAMVEASKESLGTPAPAGKAAVADKPAAPGPQPPHPDVVTLDDFAKLDLR
                     VGKVLVCEHVEGSTKLLRFELDAGELGKRQIFSGIRAAYAEPEKLVGRNVVFIANLAP
                     RKMRFGLSQGMILSAGTGGSDLFLLDADQGAQAGATVR"
     gene            2032..2631
                     /locus_tag="VFM52_00965"
     CDS             2032..2631
                     /locus_tag="VFM52_00965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019463778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transport complex subunit RsxB"
                     /protein_id="HET8763769.1"
                     /translation="MNTLADQIDALLPQTQCGQCGYHGCRPYAEAMARGEAPINRCPP
                     GGQAGIRKLAALLGVPEIPLDTSRGVEKPRLLAHIVERDCIGCTKCIQVCPTDAIVGA
                     PKLMHTVLADDCTGCELCVAACPVDCIELVTMPEAQLDQAHADAARERFTQREARLAR
                     EQAEREAQLAARKAEVDAALTPENPVLAALARARAKQRS"
     gene            2642..3280
                     /gene="nth"
                     /locus_tag="VFM52_00970"
     CDS             2642..3280
                     /gene="nth"
                     /locus_tag="VFM52_00970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017460379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003906 - DNA-(apurinic or apyrimidinic
                     site) endonuclease activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease III"
                     /protein_id="HET8763770.1"
                     /translation="MKREEVVELFTRLRELNPHPVPELKYDSPFELLVAVVLSAQATD
                     VGVNKATRKLFPVARTPQAMLALGEDGLKRYINTIGLYNAKAKNVIGLCEQLIARHAG
                     KVPRTREALEALPGVGRKTANVVLNVAFGEPTIAVDTHIFRVANRTGLAPGKTVRAVE
                     DKLLKIVPDEFRKDAHHWLILHGRYVCKARKPDCPHCPIRDICRYPHKTPPD"
     gene            3371..3787
                     /locus_tag="VFM52_00975"
     CDS             3371..3787
                     /locus_tag="VFM52_00975"
                     /inference="COORDINATES: protein motif:HMM:NF022159.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2501 domain-containing protein"
                     /protein_id="HET8763771.1"
                     /translation="MRSWLLVTALVFAATASAQNLDALKGAAGNLLGQKSAPTSALPS
                     LSSLGSAQNAAGVLGYCQSHGYLPSATETLRNKLLGSLGAPAQAKQDAGYQQGLGGML
                     QGGDGQSFNLASLKGTIAKKLCQSVADKATAHFLGH"
     gene            3858..4514
                     /gene="rnt"
                     /locus_tag="VFM52_00980"
     CDS             3858..4514
                     /gene="rnt"
                     /locus_tag="VFM52_00980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017460377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016896 - RNA exonuclease activity,
                     producing 5'-phosphomonoesters [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA];
                     GO_process: GO:0042780 - tRNA 3'-end processing [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease T"
                     /protein_id="HET8763772.1"
                     /translation="MDVSSHSMASRMAGRFRGFLPVVVDVETGGFNAERDALLEIGVV
                     LLAMDGDGFLHPHATVHVNVAPFPGANLDPRALEVTGIDPDNPLRGAVDERQALEQVF
                     QPVRAEIRSHGCQRAVLVGHNAHFDLGFINAAVQRTGNKRSPFHPFSCFDTATLAGLA
                     YGQTVLSKAVQASGREFSAHEAHAALYDAERTATLFCDIVNRWHKLEMLERDRVGQML
                     "
     gene            4655..>4788
                     /locus_tag="VFM52_00985"
     CDS             4655..>4788
                     /locus_tag="VFM52_00985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007808970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter substrate-binding
                     protein PstS"
                     /protein_id="HET8763773.1"
                     /translation="MRLGAIAFAVVCSLGALSAQATDITGAGSGFVYPVISKWSASYA
                     "
BASE COUNT          807 a         1716 c         1535 g          730 t
ORIGIN      
        1 cgacatctgg gtgcgtgcgc agcgcatgat gggcagcgag gtggcgtacg tctgcgccga
       61 cgacgcgcac ggcacgccga tcatgctggc ggcggaaaag gccggtacca cgcccgaagc
      121 cttcatcgac ggcatccgcc agaagcacgc cgccgacttc gccgcgttcg gtgttgcctt
      181 cgaccactac cacaccaccc actcggacga gaaccgcgag ctggccacgc tgatctacac
      241 gcggctgcgc gatggcggct acatcgccaa gcgcagcatc cagcagctgt acgaccccga
      301 gaagcagatg ttcctgccgg atcgctacat caagggcacc tgcccgaagt gcggcgccgc
      361 cgaccagtac ggcgacaact gcgaagtgtg cggggccacc tatgcgccca ccgacctgct
      421 gaacccatac tcggtggtat ccggcgcgac gccggtgctg aaggattcgg agcactactt
      481 cttcgagctc ggcaagttcg aggcgctgct gcgcgactgg ttcgccggca agcgcaccgc
      541 cggcaagccg gtcgcgaacc ccagcgtggt cgccaagctg cacgagtggc tggacggcgg
      601 cctgaaggac tgggacatct cgcgcgacgc gccgtatttc ggttttccga tcccggatgc
      661 gccgggcaag ttcttctacg tctggctcga cgcgccggtc ggctacctcg ccagcttcaa
      721 ggcgctgtgt gcgaagaccg ggctgaagtt cgacgactat ctcggtgagg gcagcaccgc
      781 cgagctgcac cacttcatcg gcaaggacat catcaatttc cacggcctgt tctggccggc
      841 gatgctgcac ggcgcgcact tccgcacgcc gaccgcgctg cacgtcaacg ggtacctgac
      901 ggtgaacggc gcgaagatgt ccaaatcgcg cggcaccttc atcaaggcgc gcacctacct
      961 cgacgccggg ctcgatccgg aatacctgcg ctactacttc gcgagcctgt tgaacgacac
     1021 cccggtcgac gtcgatctcg acctcaaggc gttcgaggaa cgcgtcaact cgcacctcgt
     1081 cggcaagtgg gtgaacatcg ccagccgcac gcagggtttc gtgcacaagt tcttcgacgg
     1141 caggctggtc gccgcattcg acgccgagcg cgatgcgttg tggcaggcgt tgcttgccca
     1201 gtacaacggc atcgaggcgc tgtacgaagg cggccacttc gccgacctcg cgcgccgttt
     1261 cgtcgccatg gccgatctcg tcaacggcca catcgccgag aaggcgccgt ggacgctggc
     1321 caaggacgcc gcgcaccgcg acgagctgca ccaggtgtgc tcgttcgccc tggccgcgtt
     1381 ccgcctgctt tccggcctgt tgaaacccat cctgccggcg accgtggcca gcgccgagac
     1441 gttcctcgcc gcgcccatcg ccgacttcgc cggcgcacgc gacgcgctgc acggccatac
     1501 gatcggcaag ttcacgccgc tgatggcgcg cctcgatccc aagcacgtcg aggcgatggt
     1561 cgaggcttcc aaggagtcac tgggcacgcc agcccccgcg gggaaggctg ccgtggccga
     1621 caagcctgcc gctccgggcc cccagccgcc ccaccccgat gtcgtcaccc tcgacgactt
     1681 cgccaagctc gacctgcgcg tcggcaaggt gctcgtatgc gagcacgtgg agggttcgac
     1741 caagctgctg cgcttcgagc tggacgccgg cgagctgggc aagcggcaga ttttctctgg
     1801 catccgcgcg gcctacgccg aaccggaaaa actcgtcggc cgcaacgtgg tgttcatcgc
     1861 caacctcgcc ccgcgcaaga tgcgcttcgg cctctcccag ggcatgatcc tgtccgccgg
     1921 caccggcggc agcgacctgt tcctgctcga cgccgaccag ggcgcgcagg cgggcgcaac
     1981 ggtgcgctga ccgccaggat cgaaccacca cctcgccacc cgccgcttcc cgtgaacacc
     2041 cttgccgacc agatcgatgc cctgctgccg cagacgcaat gcggccagtg cgggtatcac
     2101 ggttgccggc cgtacgccga ggcaatggcg cgcggcgagg cgccgatcaa ccgctgcccg
     2161 cccggcggac aggccggcat ccgcaagctg gcggcgctgc tcggcgtgcc ggaaatcccg
     2221 ctcgacacca gccgcggcgt ggagaagccg cgcctgctgg cgcacatcgt cgagcgcgat
     2281 tgcatcggct gcaccaagtg catccaggtg tgccccaccg acgcgatcgt cggcgcaccg
     2341 aagctgatgc acaccgtgct tgccgacgac tgcactggct gcgagctgtg cgtggccgcg
     2401 tgcccggtgg actgcatcga gctggtgacc atgcccgagg cgcagctcga ccaggcgcat
     2461 gccgatgcgg cgcgcgaacg cttcacgcag cgcgaggcac ggctcgcccg cgaacaggcc
     2521 gagcgcgagg cccagcttgc tgcgcgcaag gcggaagtgg atgccgcgct gacgccggag
     2581 aacccggtgc tcgctgcact cgcccgcgcc cgcgcgaagc aacggagctg acgccgtggc
     2641 attgaagcgc gaggaagtcg tcgagctgtt cacccgactg cgcgagctga acccgcaccc
     2701 ggtgccggag ctgaaatacg actcgccgtt cgagctgctg gtggccgtgg tgctttccgc
     2761 acaggccacc gacgtcggcg tcaacaaggc cacgcgcaag ctgtttccgg tggcgcgcac
     2821 gccgcaggcg atgctcgcgc tcggcgaaga cggcctcaag cgctacatca acaccatcgg
     2881 cctgtacaac gccaaggcca agaacgtcat cggcctgtgc gagcagctga tcgcccgcca
     2941 cgccggcaag gtgccgcgca cgcgcgaagc gctcgaggcg ctgcccggcg ttggccgcaa
     3001 gaccgccaac gtggtgctca acgtcgcgtt cggcgaaccg acgatcgcgg tcgacacgca
     3061 catcttccgc gtcgccaacc gcaccggcct agcccccggc aagaccgtgc gcgcggtgga
     3121 ggacaagctg ctcaagatcg tccccgacga attccgcaag gacgcccatc actggctgat
     3181 cctgcacggc cgctacgtgt gcaaggcgcg caagccggat tgcccgcatt gcccgatccg
     3241 cgacatctgc cgctacccgc acaagacgcc gcctgactga gtggccggcg ggccctgccg
     3301 aatccgctga ccgtcgcggt ataacgagca ctccatagcc aacgaggtgc tgaccatgta
     3361 ccgggtttcc gtgcgttcct ggctgcttgt caccgcgctc gtcttcgccg ccacggcgtc
     3421 ggcgcagaac ctcgatgcgc tcaagggtgc cgccggcaac ctgctcggcc agaaaagtgc
     3481 cccgacttcc gcattgccat cgctctcgtc gctgggcagc gcgcagaacg ccgccggcgt
     3541 gctcggctac tgccagtcgc acggctacct gccgagcgcc acggaaaccc tcaggaacaa
     3601 gctgctcggc agcctcgggg caccggcgca ggccaagcag gacgccggct accagcaagg
     3661 cctgggcggt atgctgcagg gcggcgacgg ccagagcttc aacctggcga gcctgaaagg
     3721 cacgatcgcg aagaagcttt gccagagcgt ggccgacaag gcgaccgcgc actttctcgg
     3781 tcattgaccg ccacgcggcg gagtcgcgtg atggcaccat cacccgcggt gcaaaccgcg
     3841 gctgatatgc ttgccggatg gatgtttcga gccacagcat ggccagccgc atggccgggc
     3901 gctttcgcgg tttccttccg gtggtcgtgg acgtcgaaac cggcggtttc aacgccgagc
     3961 gcgatgcgct gctggaaatc ggtgtcgtgc tgctggccat ggacggcgac ggtttcctgc
     4021 atccgcatgc gacggtgcac gtcaacgttg cgccgtttcc cggcgccaac ctcgatccgc
     4081 gcgcgctcga ggtcaccggc atcgatccgg acaacccgct gcgcggcgcg gtcgacgagc
     4141 gccaggcgct ggagcaggtg ttccagccgg tgcgcgcgga gatccgcagc catggctgcc
     4201 agcgcgcggt gctggtcggc cacaacgcgc atttcgacct cggcttcatc aacgccgccg
     4261 tgcagcgcac cggcaacaag cgcagcccgt tccacccgtt cagttgtttc gacaccgcga
     4321 cgctggctgg cctggcgtat ggccagaccg tgctgagcaa ggcggtgcag gcgtccggcc
     4381 gcgaattcag cgcccacgaa gcgcacgccg cgttgtacga cgccgagcgc actgccacgc
     4441 tgttctgcga catcgtcaac cgctggcaca agctggagat gctcgaacgc gaccgggtcg
     4501 ggcagatgct ctaggagccc gggcaccgcg gcgctgtcat cccgttgcaa cattttcctc
     4561 atcgacgtgc aacacgcggc cgctgcaatg gcgggcatcg ggcattacca cgcccccagc
     4621 aggagccacc gtgttgacct cacctcgccg caccctgcgc ctcggcgcta tcgccttcgc
     4681 cgtcgtctgc tcgctgggcg cattgtccgc gcaagccacc gatatcaccg gcgcgggctc
     4741 cggcttcgtg tatccggtca tttcgaagtg gtcggccagc tacgccga
//
LOCUS       DASSVL010000059         4815 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_495526, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000059 DASSVL010000000
VERSION     DASSVL010000059.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 4815)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4815)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4815
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_495526"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            220..2556
                     /locus_tag="VFM52_00990"
     CDS             220..2556
                     /locus_tag="VFM52_00990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008217258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0009060 - aerobic respiration [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cbb3-type cytochrome c oxidase subunit I"
                     /protein_id="HET8763774.1"
                     /translation="MSRVLIWILIAVTIACAGGMLAATRSTYQQAAPIPAQMTAADGT
                     PVMSRADIVAGKSGFQKADLMDYGSLYGMGSSFGEDYTAEYLVRLAKLTRDNLAQATY
                     GKPYAALTADQQSGAAATMRSELQGIDLAAPAVTLPTAVASAVTTLRTELAASLLRND
                     FAKGYTGARALDAASSRQTASFILYSALTTVARRPGKDYSWTSNWPNEPLVGNHPTAA
                     TFTWTWASFTMVFFAIGAILVIYRLWIEPKAKEENFDPVLAAFKAPTPSQKALWKYFL
                     VVAGVFLLQIAVGSIMAHYYTERTGFYGIDIDTWLPFAFLRSVHLQAPIVWIGVSWIG
                     AGLFLAPIIGQREPAHQRLLVNLIFWVLVAIVGGALVGDYLGITGLVDQHWFWFGNQG
                     LSYLELGRFWQIAFMAGLAVWCAVLLRAFWPTLKALYQQSGGGVTGLFRIEHLLWIST
                     LSVAVLYVFGMIPLGSPNPSFSITDFWRWWVVHLWVELAFELFAASVTGYFLMALGLV
                     SRQMAERAVLFEWILIVIGGVLGTGHHLYWAGEPGLWVGVGSMFSFIEILPLVLLAME
                     AIDQHQHIKAKQGFPYKLAYLYILGAAFWNFVGAGVFGGGTLNAPLVNYYEHGTFLTL
                     NHAHMSMFGAFGLLAIGLLYMVLRYVNGERAWSDRRGVWAFWLYNTGLVMWIVMNFYP
                     IGWPQLEAVYTHGYAWARSLAFYDTVVFWQWMRLPGDLVFAAGAVLMSWDFVAKLWSL
                     RGEHQALRHHRSIADAHAVARRSRRHAASGHDLPGQGL"
     gene            complement(2636..4135)
                     /locus_tag="VFM52_00995"
     CDS             complement(2636..4135)
                     /locus_tag="VFM52_00995"
                     /inference="COORDINATES: protein motif:HMM:NF012503.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HET8763775.1"
                     /translation="MPETTPLPADAERILARLDALRATDAPTHGGRVLSYVYDPGLAA
                     LDELAARAMRAVQPLNGLDPTTFPSVAAMERELVGFARAMLHGDGDVVGNVTSGGTES
                     CLLAVKTARDRWRTNGGTGTPRLVAPVTAHAAFRKAAALFDLVFDGVPIDADSARLDA
                     TRLLARLGDDVALVVVSAPAYPTGMLDPVAEVAAACAAHGIACHVDACFGGWILPWWP
                     GAPLPAWDFRVPGVTSVSADAHKFGYAPKGASVLLQRGRDRHRKQYFATTDWPGYPVV
                     NPTLLGSKSAAPLAAAWAITQWLGADGYARLAAQCAAAAAHLAAVMADIDGLRLYGNP
                     SGPALAVTADLRVPAARRVDPHHWADAVRQRGWLLQQQPGYRQADGSALPTTTHLTIT
                     PVTASVQDALAAALTQAADEVRGQPPADASAMLAALPALPTGQLPDAARSAALLASLG
                     VLSPGGSIALPATTAPLLALLAAVPPALAERLLIEVLARAVEPAAAPAG"
     gene            complement(4128..>4815)
                     /locus_tag="VFM52_01000"
     CDS             complement(4128..>4815)
                     /locus_tag="VFM52_01000"
                     /inference="COORDINATES: protein motif:HMM:NF024742.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HET8763776.1"
                     /translation="AGQHYRAAGAALAASPAFRALLGAYLLQAIATGEMLAAASYVAT
                     YVLHAESAVTLLFVALIAPALPCAPLWGLLAQRIGKERAYFIASVLFMVGALSLVGLL
                     WYPGAWLYASMAACGVGYAAMQALPMAMLPDVISADAKAHGRERAGVFGGAWTAVETA
                     GFALGAGVLAGVLAVTGYSAHAVGTAVPQPPAATLGIAIAFSVVPALLVAASLIPLMR
                     YRLRREDIHA"
BASE COUNT          707 a         1643 c         1734 g          731 t
ORIGIN      
        1 gctgtcctcg gcacaccgcg tgacgaaacg ccgcagcggg tttcgccggg attttcccgc
       61 acccgcaacg ccatcgttcc ggtttctgat ttgcgtcatg ggtgggtggc gcgctgcccg
      121 caggatgcgc gcgctttttc cccaccccat gcacgaggca gaaaaatgcg cacggaaaca
      181 cgaacccaac ctgcgggccg gtgcggcccg caggaccctg tgagccgggt cctgatctgg
      241 atcctgatcg cggtgaccat cgcctgtgct ggcggcatgc ttgccgccac acgcagcacc
      301 taccagcaag cggcaccgat cccggcgcag atgacggcgg ccgatggcac gccggtgatg
      361 agccgcgccg acatcgtggc cggcaagtcg ggcttccaga aagccgacct gatggactac
      421 ggctcgctgt acggcatggg ctcctcgttc ggcgaggact acaccgccga gtacctcgtg
      481 cggctcgcga aactcacccg cgacaatctc gcgcaggcga cttacggcaa gccgtacgcg
      541 gcgctcaccg ccgaccagca aagcggcgcg gccgccacca tgcgcagcga gctgcaaggc
      601 atcgaccttg ccgcgcccgc ggtgacgctg cccaccgcgg tggcgagcgc ggtgaccacg
      661 ctgcgcaccg agctggcggc gtcgctgctg cgcaacgact tcgccaaggg ctacaccggc
      721 gcgcgcgcgc tcgacgcggc aagctcgcgg cagaccgcga gcttcatcct gtactccgcg
      781 ctcaccacgg tcgcgcgccg gcccggcaag gactactcgt ggaccagcaa ctggccgaac
      841 gagccgctgg tcggcaacca cccgaccgcc gccacgttca cctggacctg ggcctcgttc
      901 accatggtgt tctttgccat cggcgcgatc ctcgtcatct accggctgtg gatcgaaccc
      961 aaggcgaagg aggaaaactt cgacccggtg ctggccgcgt tcaaggcgcc gacgccgagc
     1021 cagaaggcgt tgtggaaata cttcctggtg gtggccggcg tgttcctgct gcagatcgcc
     1081 gtcggctcga tcatggcgca ctactacacc gagcgcaccg gcttctacgg catcgacatc
     1141 gacacctggc tgccgttcgc cttcctgcgc agcgtgcacc tgcaggcgcc catcgtgtgg
     1201 atcggcgtga gctggatcgg cgccggcctg tttctcgccc cgatcatcgg ccagcgcgag
     1261 cctgcgcatc agcgcctgct ggtgaacctg atcttctggg tgctggtcgc catcgtcggc
     1321 ggcgcgctgg tgggcgatta cctcggcatc accgggctcg tcgaccagca ctggttctgg
     1381 ttcggcaacc agggcctgtc gtacctggag ctgggccgct tctggcagat cgcgttcatg
     1441 gccgggctgg cggtgtggtg cgcggtgctg ctgcgcgcgt tctggcccac gctgaaagcg
     1501 ctctaccagc aaagcggcgg cggcgtgacc ggcctgttcc gcatcgagca cctcctgtgg
     1561 atcagcacgc tcagcgtggc cgtgctctac gtgttcggca tgatcccgct gggttcgccc
     1621 aacccgtcgt tctcgatcac cgacttctgg cgctggtggg tggtacacct gtgggtggag
     1681 ctggcgttcg agctgttcgc cgcctcggtc accggctact tcctgatggc tctcgggctg
     1741 gtgtcgcggc agatggccga acgcgcggtg ctgttcgagt ggatcctgat cgtgatcggc
     1801 ggcgtgctcg gcaccggcca ccacctgtac tgggcgggcg agcccgggct gtgggtgggc
     1861 gtgggcagca tgttctcctt catcgagatc ctgccgctgg tgctgctggc gatggaggcc
     1921 atcgaccagc accagcacat caaggcgaag cagggctttc cgtacaagct ggcctacctg
     1981 tacatcctcg gtgcggcgtt ctggaacttc gtcggcgccg gcgtgttcgg cggcggcacg
     2041 ctcaacgcgc cgctggtgaa ctactacgag cacggcactt tcctcacctt gaaccacgcg
     2101 cacatgtcga tgttcggcgc cttcggcctg ctcgccatcg gcctgctgta catggtgctg
     2161 cgctacgtca acggcgagcg ggcgtggagc gatcgccgcg gcgtgtgggc gttctggctc
     2221 tacaacacgg gtctggtgat gtggatcgtg atgaacttct atccgatcgg ctggccgcag
     2281 ctcgaagcgg tctacaccca cggctacgcc tgggcgcgca gcctcgcgtt ctacgacacc
     2341 gtggtgttct ggcaatggat gcgcctgccg ggcgatctgg tgtttgccgc gggcgcggtg
     2401 ctgatgagct gggatttcgt cgccaagctg tggagcctgc gcggcgagca tcaggcgctg
     2461 cgccaccacc gcagcatcgc cgacgcccat gccgtagcgc gtcgcagccg ccggcatgct
     2521 gccagtgggc acgacctgcc ggggcagggg ttgtaaccga cttgccccgg cgaagcggat
     2581 tcgccggggc aaggtctgtc gttcgacgga cggacgcctg gacgtccagg cgcaatcaac
     2641 cagctggcgc tgctgccggt tccaccgcgc gcgccagtac ttcgatcaac aggcgctccg
     2701 cgagcgctgg cggcacggcc gcgagcaagg ccaggagcgg cgcggtggtg gcgggcaggg
     2761 cgatggagcc gccgggcgac agcacgccga gcgatgccag cagggcggcg gaccgcgccg
     2821 catcgggcag ctggccggtg ggcagcgcgg gcagggcggc gagcatggcg gatgcgtcgg
     2881 cgggcggctg gccgcgcact tcgtcggccg cctgggtcag cgcggcggcg agcgcgtcct
     2941 gcacgctggc cgttaccggg gtgatggtga gatgggtggt ggtgggcagc gcgctgccgt
     3001 cggcctggcg atagccgggt tgctgctgca gcagccagcc gcgctggcgc accgcgtcag
     3061 cccagtggtg cgggtcgacg cggcgtgcgg ccggcacgcg caggtcggcg gtgacggcca
     3121 gcgccgggcc gctcgggttg ccgtacaggc gcaggccatc gatatcagcc atcacggcgg
     3181 caaggtgcgc ggccgcggcg gcgcattgcg cggcgaggcg tgcgtagccg tccgcgccca
     3241 gccattgggt gatcgcccac gcggcggcaa gcggcgcggc ggatttggag ccaagcaagg
     3301 tcgggttgac caccgggtag ccgggccagt cggtggtcgc gaaatactgc ttgcggtggc
     3361 ggtcgcggcc gcgctgcagc agcacactgg cgccctttgg cgcatagccg aatttgtgcg
     3421 cgtcggcgga gacgctggtg acacccggaa cgcggaaatc ccacgccggc agtggtgcgc
     3481 cgggccacca cggcaggatc cagccgccga agcaggcatc gacgtggcag gcaatgccgt
     3541 gcgcggcgca tgcggcggcg acctcggcga caggatcgag cataccggtg gggtaggccg
     3601 gtgcggagac gacgaccagt gccacgtcgt cgcccagccg agccagcagc cgggtggcgt
     3661 cgagccgcgc cgagtcggca tcgatcggca cgccgtcgaa gacgagatcg aacaacgccg
     3721 ccgccttgcg gaacgccgcg tgcgcggtga ccggcgcgac cagacgcggg gtgcctgttc
     3781 caccgtttgt gcgccagcgg tcgcgcgcgg tcttcaccgc gagcaggcag ctctcggtgc
     3841 cgccggaggt gacgttgccg accacgtcgc cgtcgccgtg cagcatggcg cgcgcaaagc
     3901 cgaccagttc gcgctccatc gccgccaccg acgggaacgt cgtcgggtcg agtccgttca
     3961 gcggctgcac cgcacgcatc gcgcgtgcgg ccagttcgtc cagcgcggcc aggccggggt
     4021 cgtagacgta ggacagcacg cggccgccat gggtgggcgc gtccgtcgcg cgcaacgcat
     4081 cgaggcgcgc gaggatgcgc tcggcgtcgg cgggcagggg cgtggtttca ggcatggatg
     4141 tcctcccggc gcagccggta gcgcatgagc gggatgaggc tcgcggcgac cagcagcgcc
     4201 ggcaccacgc tgaacgcgat ggcgatgccg agcgtggcgg cgggtggctg cggcacggcg
     4261 gtgcccacgg cgtgcgcgct atagccagtg acggccagca cgccggccag cacgccggcg
     4321 ccgagcgcga agccggcggt ttccaccgcc gtccaggcgc cgccgaacac gccggcgcgt
     4381 tcgcggccgt gcgccttcgc gtcggccgaa atcacgtccg gcagcatcgc catcggcagt
     4441 gcctgcatcg ccgcgtagcc cacgccgcag gcggccatcg acgcatagag ccaggcgccg
     4501 gggtaccaga ggaggccgac aagcgacagc gcgccaacca tgaacagcac gctcgcgatg
     4561 aagtacgcgc gctccttgcc gatccgctgt gccaggagcc cccacagcgg cgcgcacggc
     4621 agcgccgggg caatcagcgc gacgaacagc agtgtcaccg cgctttcggc gtgcagcacg
     4681 taggtggcca cgtagctcgc cgcagccagc atttcaccgg tggcgatggc ttgcagcagg
     4741 taggcgccga gcaaggcgcg aaacgccggg ctggcggcca gcgccgcgcc ggccgcgcgg
     4801 tagtgctgcc cggcg
//
LOCUS       DASSVL010000060         2038 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_354492, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000060 DASSVL010000000
VERSION     DASSVL010000060.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2038)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2038)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2038
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_354492"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..856
                     /locus_tag="VFM52_01005"
     CDS             <1..856
                     /locus_tag="VFM52_01005"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HET8763777.1"
                     /translation="VLATPWVGRRALRPLTALARVMADIGPDTPGARLPASHTAELVP
                     LTDRFNEVLARMDDGMARERRFAAGVAHEFRTRLAELRVLVEVETRYPSGRDAVALLA
                     EVGHICAELEATVTALLQLTRIQAGLEQAHIEAVPLAGVIERVTARHLPAAQARGLAL
                     DITLADATATVDADPTLLEVVFDNLLGNAIEYAAENGGIELRAEPGRWTVCNAAPLLQ
                     ADDVPRLGQQFWRKSPAGSGHAGLGIALATAAAKAMHMRLGFTLADDRLCAALTWGAA
                     PGDGRANA"
     gene            complement(980..>2038)
                     /locus_tag="VFM52_01010"
     CDS             complement(980..>2038)
                     /locus_tag="VFM52_01010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008212294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porin"
                     /protein_id="HET8763778.1"
                     /translation="QVQAKQATIAAAPGDALGKRVDALDKLVNDTKLSGKMFFDFSNI
                     DQKNSDTGKTAANGVGLDVKRFYLGIDHKFNDIWSANLTTDFNYVGSDGETNLFVKKA
                     YVQGKFDKAAIFRVGSADMPWIPFVENLYGFRYVENTLTDRLKYANSADWGLHLFGDL
                     GASKVANYAVSVVNGGGYKNPGRSKGVDVEARVGFVPFDGLTVALGGYSGHLGKETQT
                     SSADHTAQRGDLLVAYVNKRFRVGGEYFTAKDWNNVLTPRSDKADGWSVWGSVALTDD
                     LALFARYDEAKLSKFLDHNAKDTYYNLGLQYQVTKGFKLAGVWKHEQGDKSVTTPLPP
                     HVQNVKTNEIGVFGEVAF"
BASE COUNT          280 a          715 c          701 g          342 t
ORIGIN      
        1 ggtgctggcc acgccgtggg tcggccggcg cgccctgcgc ccgctcaccg cgctggcccg
       61 ggtgatggcc gacatcgggc cggacacccc gggcgcccgg ctgccggcca gccacactgc
      121 cgagctggtg ccgctcaccg accgtttcaa cgaagtgctg gcgcgcatgg acgacggcat
      181 ggcgcgcgag cgccggtttg ccgccggcgt ggcgcacgag ttccgcaccc ggctggccga
      241 attgcgcgtg ctggtggaag tcgagacccg atatccgagc ggacgcgacg ccgtcgcgct
      301 gctggcggaa gtcggccaca tctgcgccga gctcgaagcc acggtgacgg cgctgctgca
      361 gctcacccgg atccaggccg ggctggaaca ggcgcacatc gaggcggtgc cgctggccgg
      421 cgtcatcgag cgcgtgacgg cgcgtcacct gccggcggcg caggcacgcg gcctggccct
      481 ggatatcacg ctggcggacg ccaccgccac ggtcgatgcg gaccccacct tgctggaagt
      541 cgtgttcgac aacctgctcg gcaacgcgat cgaatacgcc gcggaaaacg gcggcatcga
      601 gctgcgcgcc gaacccggcc gctggacggt gtgcaacgcg gcgccgctgc tgcaggccga
      661 cgacgtgccg cggctcggcc agcagttctg gcgcaaatcg ccggccggca gcggccatgc
      721 cggcctcggc attgccctcg ccaccgccgc cgccaaggcc atgcacatgc gcctcggctt
      781 caccctggcc gatgaccggt tgtgcgctgc gctgacgtgg ggcgccgcgc cgggggacgg
      841 ccgcgcgaac gcctgatccc gggccggact ccgtgtccgg cccgggcttg ctgcccgcca
      901 cgcggtcgcc gcgcgcggac atccctggcg ggtggcgcgg tttcctgccg ggccgcccgc
      961 cgatctgccg ccaccaacct cagaacgcca cttcgccgaa cacgccgatc tcgttggtct
     1021 tcacgttctg cacgtgcggc ggcagcggcg tggtcaccga cttgtcgccc tgctcgtgct
     1081 tccacacgcc ggccagcttg aagcccttgg tcacctggta ctgcaggccg aggttgtagt
     1141 aggtgtcctt ggcgttgtgg tccaggaact tgctgagctt cgcctcgtcg tagcgggcga
     1201 acagcgcgag gtcgtcggtc agcgccacgc tgccccacac cgaccagccg tcggccttgt
     1261 cggagcgcgg cgtcagcacg ttgttccagt ccttggcggt gaagtactcg ccacccacgc
     1321 ggaaccgctt gttgacgtag gccaccagca ggtcgccgcg ctgcgcggtg tggtcggcgc
     1381 tgctcgtctg ggtctccttg ccgagatggc cggagtagcc gcccagcgcc acggtcaggc
     1441 catcgaacgg cacgaagccc acgcgcgctt ccacgtccac gcccttgctg cggccggggt
     1501 tcttgtagcc gccgccgttg accacggaca ccgcgtagtt ggcgaccttg ctggcgccca
     1561 ggtcaccgaa caggtgcaag ccccagtcgg ccgagttggc gtacttcagg cggtcggtga
     1621 gggtgttctc gacgtagcgg aagccgtaca ggttctcgac gaacgggatc cacggcatgt
     1681 cggccgaacc gacgcggaag atcgcggcct tgtcgaactt gccctgcacg taggccttct
     1741 tcacgaacag gttggtctcg ccgtcgctgc cgacgtaatt gaagtcggtg gtgaggttgg
     1801 ccgaccagat gtcgttgaac ttgtggtcga tgcccaggta gaagcgcttc acgtccagtc
     1861 cgacgccgtt ggcggcggtc ttgccggtat cgctgttctt ctggtcgatg ttgctgaagt
     1921 cgaagaacat cttgccggac agcttggtgt cgttgaccag cttgtccagc gcatccacgc
     1981 gcttgcccag cgcgtcgcca ggcgcggcgg cgatggttgc ctgcttcgcc tgcacctg
//
LOCUS       DASSVL010000061         2327 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_326097, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000061 DASSVL010000000
VERSION     DASSVL010000061.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2327)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2327)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2327
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_326097"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1083)
                     /locus_tag="VFM52_01015"
     CDS             complement(<1..1083)
                     /locus_tag="VFM52_01015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015447405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate-binding protein"
                     /protein_id="HET8763779.1"
                     /translation="MLDGRRDLLAPAAAFPRRYPALLESVLHGTPQARYDILFGFPQG
                     RLELGADGVVRDGHGAAHGTRFLAALDAAWQAGRTPRVDDGLPFHGGWVLLLAYELAR
                     EVEPTLPLPVGGAMPVALALRCPVAAIVDHVRDCTVLFAEPGYEAWLDVLAADLAGIG
                     EVPPLPAPLSVSEDDPARFLDGVARIHDHLRAGDIFQVNLSRAWRARFAEAPAPAALY
                     AALRRANPAPFAGLLQQPGWAVASSSPERLIELRDGTVQTRPIAGTRPRVPGDDDPAR
                     IRELVGNVKERAEHVMLIDLERNDLGRVCVPGSVAVDELMTVESYTHVHHIVSNVRGR
                     LRDGVTPGQAIAAVFPGGTITGCPKVR"
     gene            complement(1106..>2327)
                     /gene="fabF"
                     /locus_tag="VFM52_01020"
     CDS             complement(1106..>2327)
                     /gene="fabF"
                     /locus_tag="VFM52_01020"
                     /EC_number="2.3.1.179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007805186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase II"
                     /protein_id="HET8763780.1"
                     /translation="VTGMGIISPVGNDLSTAWKNLLAGVSGIGPVTHFDASGYATRIA
                     GQVKDFAPTDWIAPKDVKKMDPFIQYGVAAGTQAMRDSGFVVTEGNAQRFGVAIGAGI
                     GGLSTIEDTSIELHEKGPRRVSPFFVPSSIINMVSGYLSIMFGLKGPNIACVTACATA
                     THNIGLAARMIQYGDADVMLAGGAEFATTGTAMAGFCSAKAMSTRNDDPTHASRPWDR
                     DRDGFVLSDGAGVLVLEEYEAAKARGATIHAELVGFGMSGDAHHITAPSEGGEGAARC
                     MENTLRDAGLNPTDVQYINAHGTSTPLGDLGEVLAAKRVFGDHAHKLAMSSTKSVTGH
                     LLGAAGGVEAIFSILALRDQVLPPTMNLDAPGEGCDLDFVPNAARQVKDLNVVLSNSF
                     GFGGTNGTLAFRRV"
BASE COUNT          358 a          819 c          807 g          343 t
ORIGIN      
        1 gcgcaccttc gggcagccgg tgatggtgcc gccgggaaac accgcggcga tcgcctgccc
       61 cggcgtcacc ccgtcgcgca aacgcccacg cacgttcgac acgatgtgat gcacgtgggt
      121 gtagctctcc accgtcatca gctcgtccac cgcaaccgaa cccggcacgc acacacgccc
      181 gaggtcgttg cgctcgaggt cgatcagcat cacgtgctcg gcgcgctcct tgacgttgcc
      241 gaccagctcg cggatgcgtg ccgggtcgtc gtcgcccggc acgcgcggac gcgtaccggc
      301 gatcgggcgg gtctgcaccg tgccatcgcg cagttcgatc aggcgttccg gcgacgagct
      361 ggccaccgcc cagcccggct gctgcagcaa gccggcgaac ggggcgggat tcgcccggcg
      421 cagcgccgca tacagcgccg ccggcgccgg cgcctcggca aaccttgcgc gccacgcacg
      481 cgacaggttg acctggaaga tgtcgcccgc gcgcaggtgg tcgtggatgc gggccacgcc
      541 atcgagaaac cgcgccgggt cgtcctcgct cacgctgagc ggcgcgggca gcggcggcac
      601 ctcgccgatg ccggcgagat ccgcggccag cacgtcgagc caggcttcgt atccgggttc
      661 ggcgaacagc acggtgcaat cgcgcacgtg gtcgacgatg gcggccaccg gacagcgcag
      721 cgccagcgcg accggcatcg cgccgccgac cggcaatggc agcgtcggct ccacctcacg
      781 cgccagttcg tacgccagca gcaggaccca gccgccgtgg aacggcaaac catcgtcgac
      841 gcgcggcgtg cgcccggcct gccatgccgc gtccagcgcg gcgaggaaac gtgtgccgtg
      901 cgcggcgccg tgcccatcgc gcaccacccc atcggcgccc agttccagcc ggccttgcgg
      961 aaacccgaac aggatgtcgt agcgcgcctg tggcgtgccg tgcagcacgc tttccagcaa
     1021 cgcgggatag cgccgcggaa acgcagcggc cggcgcaagc aggtcgcgcc ggccgtcgag
     1081 gatgcggcaa acgccggccg tcacgtcaga cgcggcggaa ggccagcgtg ccgttggtgc
     1141 cgccgaaacc gaacgagttg gagagcacca cgtttaggtc cttcacctgc cgcgccgcgt
     1201 tcggcacgaa gtcgaggtcg cagccttcgc ccggtgcgtc gagattcatc gtcggcggca
     1261 atacctggtc gcgcagcgcg aggatcgaga agatcgcctc gacgccgccg gcagcgccga
     1321 gcaggtggcc ggtgaccgat ttcgtcgagc tcatcgcgag cttgtgcgcg tggtcgccga
     1381 acacgcgctt cgccgccagc acctcgccca ggtcgccgag cggcgtggag gtgccgtgcg
     1441 cgttgatgta ctgcacatcg gtcgggttca ggccggcatc gcgcagcgtg ttttccatgc
     1501 agcgcgcggc gccctcgccg ccttcgctcg gcgcggtgat gtggtgcgcg tcgccgctca
     1561 tgccgaaacc gaccagctcg gcatggatcg tcgccccgcg tgccttcgcc gcctcgtatt
     1621 cttccagcac cagcacgccg gcgccatcgg acagcacgaa gccgtcgcga tccctgtccc
     1681 acgggcggct cgcgtgggtc ggatcgtcgt tgcgggtgga catcgccttg gccgagcaga
     1741 aaccggccat cgcggtgccg gtggtggcga attccgcgcc gccggccagc atcacgtcgg
     1801 catcgccgta ctggatcatg cgggcggcca ggccgatgtt gtgggtggcg gtggcacagg
     1861 cggtgacgca ggcgatgttg ggacccttca ggccgaacat gatcgacagg tagcccgaga
     1921 ccatgttgat gatggagctg ggcacgaaga acggcgacac ccggcgtggc cccttctcgt
     1981 gcagctcgat cgaggtgtcc tcgatggtgc tgaggccgcc gatgccggcg ccgatcgcga
     2041 cgccgaagcg ctgcgcattc ccctcggtga cgacgaagcc ggaatccctc atcgcctggg
     2101 tgccggccgc gacgccgtac tggatgaacg ggtccatctt cttgacgtct ttcggcgcaa
     2161 tccagtcggt cggggcgaaa tccttcacct ggccggcaat gcgtgtcgcg taaccgctgg
     2221 catcgaagtg ggtgaccggg ccgatgccgc tgacgccggc aagaaggttc ttccaggcgg
     2281 tggacagatc gttgccgacc ggcgagatga tgcccatgcc ggtgact
//
LOCUS       DASSVL010000062         2006 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_806358, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000062 DASSVL010000000
VERSION     DASSVL010000062.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2006)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2006)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2006
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_806358"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..567)
                     /locus_tag="VFM52_01025"
     CDS             complement(<1..567)
                     /locus_tag="VFM52_01025"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007807613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HET8763781.1"
                     /translation="MSLRIASIALAGAIALACTGTVAAQETAATPPTGVAPVPAPAEL
                     PADRVAATLADYQRWLDELAARDGTAGLATAVVIDDKVVFERTLGYADTATQAPITPD
                     TVFRLASLSKAFASALTGLLVDRHDLHWHTKLVDVLPDFRLKDSADTDAATVADVLGQ
                     RLGLPNNAYDNLLEAGVPYADLVARLAEV"
     gene            874..>2006
                     /gene="sucC"
                     /locus_tag="VFM52_01030"
     CDS             874..>2006
                     /gene="sucC"
                     /locus_tag="VFM52_01030"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010894968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-forming succinate--CoA ligase subunit beta"
                     /protein_id="HET8763782.1"
                     /translation="MNFHEYQAKALFAQYGINVPPGKVANSPDAAVDVAKELGGSQWM
                     VKAQIHAGGRGKAGGVKFCKSLDDVRAAAKAMLGTRLATYQSAGRALPVNLVLVTDAT
                     DIAKELFLSVLVDRDRKAVSFIGSKHGGMDIEQVARETPEDIHTVVVDFVEGLQPYQC
                     RQLGFAMDLNPKQVGQLTKTMLGLYKLFNEKDLSLVELNPLAILVDGNLAALDGKVNS
                     DDNAEFRHADLAAMRDLTQEDAAEARAQQSNLNYVTMDGNIGCMVNGAGLAMATMDVI
                     KLAGGEPANFLDVGGGATKERVTEAFKLILSSDKVQAILVNIFGGIVRCDLIAEGIIA
                     AVKQVGLKVPLVVRLEGTNVELGKKLLAESGLAVTTANDMADGA"
BASE COUNT          338 a          656 c          708 g          304 t
ORIGIN      
        1 gacctcggcg aggcgcgcga cgaggtcggc gtagggcacg ccggcctcga gcaggttgtc
       61 gtacgcattg ttcggcaggc caagccgctg gccgagcacg tcggccacgg tcgcggcgtc
      121 ggtgtccgcg ctgtccttca gccggaaatc gggcaacaca tcgaccagct tcgtgtgcca
      181 gtgcaggtcg tggcggtcga ccagcaggcc ggtcagcgcg ctggcgaacg ccttggacag
      241 cgaggcgaga cggaacacag tgtccggcgt gatcggtgcc tgcgtcgcgg tgtcggcata
      301 gccgagcgtg cgctcgaaca ccaccttgtc gtcgatgacg actgcggtgg cgaggccggc
      361 ggtgccgtcg cgggcggcaa gctcgtccag ccagcgctgg tagtcggcga gcgtcgcggc
      421 gacgcgatcg gcgggcagtt cggccggggc cggtactggc gcgactccgg tcggcggcgt
      481 ggcggcggtt tcctgcgcgg ccacggtgcc ggtgcaggcc aaggcgatcg cgccggcaag
      541 cgcgatggaa gcaatacgca gggacatcgt tggacagcac ggcagggacg gcgcgcgacg
      601 cgcccgggat gccatccgct ggcgtcgcga tgacggcaat tttgcggcag ttcgcgcgtg
      661 ccgacaacgc gttgcgggcg cccgcgcggc ccggcacttt ccattgcgta ccactttcgc
      721 gaaaatgagc ggccgtgctg cgcggttttt ccttcgggga catgacgcgc acatggcatg
      781 ccggctcagc gttgcgacgc cgtccgaccc tgcaggtttg cgttgcaacc cacgcggcgc
      841 ggccttgttt ccccgttcgc tcgaggctat cgaatgaatt tccacgaata tcaggccaag
      901 gcactgttcg cgcagtacgg catcaacgta ccgccgggca aggtcgccaa ctctcccgac
      961 gccgccgtcg atgtggcgaa ggaactcggc ggttcccaat ggatggtgaa ggcgcagatc
     1021 cacgccggcg gccgcggcaa ggccggcggc gtgaagttct gcaagagcct ggacgacgtg
     1081 cgcgcggccg ccaaggccat gctcggcacg cgcctggcca cctaccagtc ggccggccgt
     1141 gcgctgccgg tgaacctggt gctggtcacc gacgccaccg acatcgccaa ggagttgttt
     1201 ctctcggtgc tggtcgaccg cgaccgcaag gcggtgtcgt tcatcggctc caagcacggc
     1261 ggcatggaca tcgagcaggt cgcgcgcgag acgccggaag acatccacac cgtggtggtg
     1321 gatttcgtcg agggcctgca gccctaccag tgccgccagc tcggcttcgc gatggacttg
     1381 aacccgaagc aggtcggcca gctcaccaag accatgctgg gcctgtacaa gctgttcaac
     1441 gagaaggacc tctcgctggt cgagctgaac ccgctggcga tcctggtcga cggcaacctc
     1501 gccgcgctgg acggcaaggt caactccgac gacaacgccg agttccgcca cgccgacctc
     1561 gccgcgatgc gcgacctgac gcaggaagac gccgcggagg cgcgcgcaca gcagtccaac
     1621 ctcaactacg tgacgatgga cggcaacatc ggctgcatgg tcaacggcgc cggcctcgcg
     1681 atggcgacga tggacgtgat caagctcgcc ggcggcgaac cggcgaactt cctcgacgtc
     1741 ggcggcggcg cgaccaagga acgcgtgacc gaggcgttca aactgatcct gtcgtcggac
     1801 aaggtgcagg cgatcctcgt caacatcttc ggcggcatcg tgcgctgcga cctcatcgcc
     1861 gaaggcatca tcgccgcggt gaagcaggtc ggcctgaagg tgccgctggt cgtgcgcctg
     1921 gaagggacga acgtcgagct gggcaagaag ttgctcgcgg agtcgggcct ggcggtcacg
     1981 accgcgaacg acatggccga cggcgc
//
LOCUS       DASSVL010000063         3813 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_311918, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000063 DASSVL010000000
VERSION     DASSVL010000063.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3813)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3813)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3813
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_311918"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..692
                     /locus_tag="VFM52_01035"
     CDS             <1..692
                     /locus_tag="VFM52_01035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007507727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="isocitrate lyase/phosphoenolpyruvate mutase
                     family protein"
                     /protein_id="HET8763783.1"
                     /translation="GGMAWSLGYADGEHAPLAEILAAIRRITRAAAVPVTVDFEAGYG
                     DTPATVATHVRNAIEAGVAGLNLEDGVRHTTLRPLADAAARIAAAREAAQRSGVPIFI
                     NARVDTYMVPWHTGEAERIEETVRRANAYLAAGADGIYPIGASDPALLKTLFARIDAP
                     VNVAAQDGLPSLTELAKLGVARVTTATRLATLAYAAARDAAARIKASGEFTGLATAFG
                     YADLQKLFPHA"
     gene            708..1172
                     /locus_tag="VFM52_01040"
     CDS             708..1172
                     /locus_tag="VFM52_01040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019465471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HET8763784.1"
                     /translation="MTQRLDYQTASPDAFKAMLHTEQTVRKSGLEESLLELVKIRASQ
                     LNGCAWCLDMHTKDARAEGETEQRLYLVPVWREAPCYSARERAALAWTEAVTKLPDGE
                     VSDAVYAEARRHFDEKALTDLTLAVIAINGWNRFNVAFRTTVGNYVSPKAKR"
     gene            1196..1915
                     /locus_tag="VFM52_01045"
     CDS             1196..1915
                     /locus_tag="VFM52_01045"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HET8763785.1"
                     /translation="MNKQQPVTAILGAGPGLGAALAVRFAREGHALALLTRSASGRQH
                     ALEAVAAVDGRARGWDCDAADPAAVAAAFAQVRATLGDPSVLICNAGSFTRGGILDLA
                     PEAFEAAWRANCYGGFLAAREVLPAMQQAHAGTILFTGATAALRGGAGFAGLAVGKFG
                     QRALAQSLAREFGPQGIHVVHVVIDGQIDSPRTRARDIARNVATFLDPAAIADAYWVL
                     HAQSRTAWTQELDLRPDVERF"
     gene            complement(1980..2603)
                     /locus_tag="VFM52_01050"
     CDS             complement(1980..2603)
                     /locus_tag="VFM52_01050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009607523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase N-terminal
                     domain-containing protein"
                     /protein_id="HET8763786.1"
                     /translation="MKLYSFPGSCGLVSNIVLEWVGEPYSVELLKKEDLHSPTFLKIN
                     PNGQVPVIEDDGWILNENAAVLSYIADKHPQAKLDGDGTPRGRAEVNRWLGMLNSDVH
                     PAFKPLFGATDFLGDEKLIAKSHANALERLRGLFGIIDKHLAGRDWLAGSSRSIADPY
                     LFVVLTWAHFVKVDLGGYENLKRFEAKMRSDAGVQKALKAQGLDKGH"
     gene            2774..>3813
                     /locus_tag="VFM52_01055"
     CDS             2774..>3813
                     /locus_tag="VFM52_01055"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HET8763787.1"
                     /translation="MRTATAAFLAARNTLLQYRDDYAGAIAHFAWPAFDRFNWALDYF
                     DVIARGNDRDALVIVGNGATQRLSFAQMAARSAQVANHLRALGVRRGDPVMLMAGNEA
                     ALWETMLACIKLGAPFIPCSVLLIEQDLAERMQRSGARHVVTSRAYTARFTAGDGARI
                     CIGGDGAPDGWVNHEAARAFPETFEPDGETRVDDPLIYYFTSGTTSQPKLVVQTHASY
                     PVGHLTTMYWVGIQPGGVHFNLSSPGWAKHAWSSFFAPWNGEATVVALNTERFDADVL
                     LACLADEHVNTFCAPPTVWRMLIQKDLAAWRGRLALRELVSAGEPLNPEVIERIRSAW
                     GLTIRDGYGQTET"
BASE COUNT          619 a         1384 c         1240 g          570 t
ORIGIN      
        1 gcggcggcat ggcgtggtcg ctcggttacg cggacggcga acacgcaccg ctggccgaga
       61 tactggccgc catccggcgc atcacccgcg ccgcagcagt gccggtcacc gtggatttcg
      121 aggccggcta cggcgacacg cctgccaccg tcgccaccca cgtgcgcaat gcgatcgagg
      181 ccggcgttgc cggcctgaac ctcgaggacg gcgtgcgcca tacgacgctg cgcccgctgg
      241 ccgacgccgc cgcgcgcatc gccgccgcgc gcgaggcggc gcagcgatcc ggcgtgccga
      301 tcttcatcaa cgcccgcgtg gatacctaca tggtgccgtg gcacaccggc gaggccgagc
      361 gcatcgagga aaccgtgcgc cgtgccaatg cgtatctcgc ggctggcgcc gacggcatct
      421 acccgatcgg cgccagcgat ccggcgctcc tgaaaacctt gtttgcgcgc atcgatgcgc
      481 cggtaaacgt cgccgcgcag gatggtctgc catccctcac cgagctggca aaactcggcg
      541 tcgcgcgcgt caccaccgcc acccggcttg ccacgctggc ctacgccgcc gcgcgcgatg
      601 cggccgcccg gatcaaggcc agcggcgagt tcaccggcct ggccaccgcg ttcggctacg
      661 ccgacctgca aaagctcttt ccccacgcct gattccagga gacacccatg acccaacgtc
      721 ttgactacca gaccgcttcg cccgatgcgt tcaaggcaat gctccacacc gagcagaccg
      781 tgcgcaaaag cggactcgag gaatccctgc tcgaactggt gaagatccgc gcctcgcagc
      841 tcaacggctg cgcgtggtgc ctcgacatgc acaccaagga tgcgcgcgcc gaaggcgaaa
      901 ccgagcagcg cctgtacctg gtgccggtgt ggcgcgaggc accgtgctac agcgcgcgcg
      961 agcgcgccgc gctggcatgg accgaggccg tcaccaagct gcccgacggc gaggtctccg
     1021 atgcggtcta cgccgaagcg cgccgccact tcgacgagaa ggccctgacc gacctcacgc
     1081 ttgcggtcat cgcaatcaac ggctggaacc gcttcaacgt cgcgttccgc accaccgtcg
     1141 gcaactacgt cagcccgaag gcgaagcgct gagtggacgg ccaaacggag gcgccatgaa
     1201 caagcagcaa cccgtcaccg cgatcctcgg cgcaggcccc ggcctcggcg cggcgctcgc
     1261 cgtgcgcttc gcgcgcgaag gccatgccct ggccttgctg acgcgctcgg catccggacg
     1321 gcagcacgca ctcgaggccg tggccgcggt cgatggccgt gcgcgaggct gggattgcga
     1381 cgccgccgac ccggccgcgg tcgccgctgc attcgcacag gtgcgcgcca cgctgggtga
     1441 tccgtcggtg ctcatctgca acgccggcag cttcacccgt ggcggcatcc tcgacctcgc
     1501 cccggaagcc ttcgaggcgg cgtggcgggc aaactgctac ggcggcttcc tcgccgcacg
     1561 cgaggtgctg ccggcgatgc agcaggcgca cgccggcacc atcctgttca ccggcgccac
     1621 cgccgcgctg cgcggcggcg cgggcttcgc cggcctcgcc gtgggcaagt tcggccagcg
     1681 cgcactggcg caaagcctcg cgcgcgaatt cggcccgcag ggcatccacg tcgtccacgt
     1741 cgtgatcgac ggccagatcg actcgccacg cacccgtgcc cgcgacattg cccgcaacgt
     1801 cgccaccttc ctcgaccccg cggccatcgc cgacgcctac tgggtgctgc acgcgcaatc
     1861 gcgcaccgca tggacccagg agctcgacct gcgcccggac gtcgaaaggt tctgaatcgc
     1921 gcacaaaaag aacggcgatg ccaggcatcg ccgttctttc gctttcgatg gcgcagcgct
     1981 cagtggccct tgtcgagccc ttgcgccttc agcgccttct gcacgccggc gtcgctgcgc
     2041 atcttcgcct cgaagcgctt gaggttctcg tagccgccga ggtcgacctt cacgaagtgc
     2101 gcccaggtga ggacgacgaa caggtacggg tcggcgatcg aacgcgacga acccgcaagc
     2161 cagtcgcggc cggcaaggtg cttgtcgatg atgccgaaca gcccgcgcag gcgttcgagc
     2221 gcgttggcgt gcgacttggc gatcagcttc tcgtcgccga ggaaatcggt ggcgccgaac
     2281 agcggcttga acgccggatg gacgtccgaa ttgagcatgc cgagccagcg attgacttcc
     2341 gcgcggccgc gcggcgtgcc atcgccgtca agcttcgcct gcgggtgctt gtcggcgatg
     2401 tagctcagca cggcggcgtt ctcgttgagg atccagccgt cgtcctcgat caccggcacc
     2461 tgcccgttcg ggttgatctt caggaaggtc ggcgagtgca ggtcctcctt tttcaggagc
     2521 tcgacgctgt agggctcacc cacccactcc agcacgatgt tggagaccaa accgcacgaa
     2581 ccgggaaaac tgtagagctt catcgggtgc ctccttgggg acaatgacgg ccagtatggc
     2641 accgtgtgca acccccgcaa acgcggcgaa agccgtccac ggcggccgtg aatccggcgt
     2701 gcaggcgcgc ggcttctgcg ccttccgcaa ggcgtgtatg gtcggctcgt ccacgccatc
     2761 cggggagaac gccatgcgca ccgcgaccgc ggcttttctt gccgcccgca acacgctgct
     2821 gcaataccgc gacgactacg ccggcgccat cgcgcacttc gcgtggccgg cgttcgaccg
     2881 cttcaactgg gcgctcgact acttcgacgt gatcgccagg ggcaacgatc gcgacgcgct
     2941 ggtgatcgtc ggcaacggcg ccacgcagcg cctgagcttt gcgcagatgg ccgcccgctc
     3001 ggcgcaggtc gcaaaccacc tgcgcgcgct cggcgtgcgc cgcggcgacc cggtgatgct
     3061 gatggccggc aacgaggccg cactgtggga aaccatgctc gcctgcatca agcttggcgc
     3121 gccgttcatc ccgtgcagcg tgctgctgat cgagcaggat ctggccgaac gcatgcagcg
     3181 cagcggcgcg cgccatgtcg tcaccagccg cgcgtatacc gcgcgcttca cggccggcga
     3241 cggcgcgcgg atctgcatcg gcggcgacgg cgcgccggat ggctgggtga accacgaggc
     3301 cgcgcgcgcg ttcccggaaa ccttcgagcc ggatggcgaa acccgcgtcg acgatccgct
     3361 gatctactac ttcacctcgg gtaccacctc acagccgaag ctggtggtgc agacccacgc
     3421 gagctatccg gtcggccacc tcaccaccat gtactgggtc ggcatccagc ccggtggcgt
     3481 gcatttcaac ctctcctcgc ccggctgggc aaagcatgcg tggagctcgt tcttcgcgcc
     3541 gtggaacggg gaggccacgg tggtcgcgct gaacaccgag cgcttcgacg ccgacgtgct
     3601 gctggcatgc ctcgccgacg agcacgtcaa caccttctgc gcgccgccca cggtgtggcg
     3661 catgctgatc cagaaagacc ttgccgcgtg gcgcggtcgc ctggccctgc gcgagctggt
     3721 gagcgccggc gaaccactca acccggaagt gatcgagcgc atccgcagcg cgtgggggct
     3781 caccatccgc gacggctatg ggcagaccga aac
//
LOCUS       DASSVL010000064         3719 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_185003, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000064 DASSVL010000000
VERSION     DASSVL010000064.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3719)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3719)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3719
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_185003"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            217..1482
                     /locus_tag="VFM52_01060"
     CDS             217..1482
                     /locus_tag="VFM52_01060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008210267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HET8763788.1"
                     /translation="MPVATAKKDPHALGAERATVSKLTVYEWVALDKRGKRMKGDMPA
                     KNASLVKAELRRQGMNQQTVKERAKPLFGATGSSVKPRDVAVFSRQIATMMTSGVPLV
                     QSFDIIADGQKNVRFKNMLIDVKQGLEGGQSLHEALGRYPVQFDELYRNLVRAGEASG
                     VLDTVLDTVATYKERTEALKKKIKKALFYPIMVIAVAFLVSMIMLLFVVPVFAQTFKD
                     AGAALPAPTQFVVSASEFMKSWWWLVILIVVGSVVGLVEGKRRSVKFAHAMDRLTLKL
                     PVFGKIMRESAIARFARTLGVTFHAGVPLVEALDSVSGATGSIVYGEAVKQMRDDISV
                     GHQLQLAMKQTNLFPNMVVQMTAIGEESGALDSMLFKVAEFYEEEVENAVDTLSTLLE
                     PLIMVILGVVVGGMVVALYLPIFKLAGTF"
     gene            1602..2459
                     /locus_tag="VFM52_01065"
     CDS             1602..2459
                     /locus_tag="VFM52_01065"
                     /EC_number="3.4.23.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015447033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004190 - aspartic-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="A24 family peptidase"
                     /protein_id="HET8763789.1"
                     /translation="MPDLPLPTWIALAAVLGLIVGSFLNVVILRLPDRMAAEWRREAR
                     DVLEMDGDDAPLPPGIVREPSHCMHCGHALSPLDNIPVISWLLLRGRCRYCHAGISIQ
                     YPLVELLTAVASAIVVWKLGPTWAALAGLGLTWSLIALSGIDFRVQLLPDQITYPLLW
                     AGLLLALVPLFVASHAAIVGTVIGYLSLWSVYWLFKLLTGKEGMGHGDFKLLAALGAW
                     MGPVALLPIVLLSSLVGAIVGGVLIATHRHDRGVPMPFGPFIAIAGWVWFVAGDTLLH
                     AYLQLAGLR"
     gene            2456..3085
                     /gene="coaE"
                     /locus_tag="VFM52_01070"
     CDS             2456..3085
                     /gene="coaE"
                     /locus_tag="VFM52_01070"
                     /EC_number="2.7.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007809539.1"
                     /note="Dephospho-CoA kinase (CoaE) performs the final step
                     in coenzyme A biosynthesis; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004140 - dephospho-CoA kinase activity
                     [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dephospho-CoA kinase"
                     /protein_id="HET8763790.1"
                     /translation="MSGTAHSYVVALTGGVAAGKSTVAERFAALGAPIHDADVAAREV
                     IEPGSDGLAAIVTAFGTGVLAADGTLDRVAMRKRIFADAAARTALEGIIHPRVRTWLH
                     ERAQHETAPYCLLAIPLLVRNIDHYRWVDRVLLVDAPETAQLARLTQRDDIDPNLAQR
                     MLAQQASRAERLAIADDVIDNSGDAAALDAAVAALHRRYLELAAGRARP"
     gene            complement(3196..>3719)
                     /locus_tag="VFM52_01075"
     CDS             complement(3196..>3719)
                     /locus_tag="VFM52_01075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008435926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="muramoyltetrapeptide carboxypeptidase"
                     /protein_id="HET8763791.1"
                     /translation="DFGAEHLSALTVPHFWRTVRAAQGSAEWASSGEHALDLEGPLWG
                     GNLAMICSLLGTPYFPRIDGGILFVEDVGEPPFRIERMLYQLHLAGVLARQHALILGD
                     FTDCRTGPRDNGYDLAAAFAQVRRVAGVPVLDGLPFGHAADKYTLPFGAPARLRADGR
                     AVRLDFAGYPHLP"
BASE COUNT          600 a         1235 c         1276 g          608 t
ORIGIN      
        1 cctgctcaag ggcaagcagg gcgtgaccag cctgaccgag atcgatcgcg tgacgaagga
       61 ttgagcgctg cggccagccg ccggggcttg gccgccaggc gtgccaagct gcggcggcga
      121 ccacggtttc ggcgccgaaa agtgtcctaa gcttcgacat cagcacgagc cggcagcgcc
      181 aagacgccgg ttcgcactca tcaaggggga acgagcatgc cagtggctac cgcgaagaaa
      241 gacccgcatg cgctgggcgc cgagcgcgcc acggtcagca agctcacggt ctacgaatgg
      301 gtggcgctgg acaagcgcgg caagcgcatg aaaggcgaca tgccggcgaa gaatgcctcg
      361 ttggtgaagg ccgagctgcg ccgccagggc atgaaccagc aaaccgtgaa ggagcgcgcc
      421 aagccgctgt tcggcgccac cggcagcagc gtcaagccgc gcgacgtggc ggtgttcagc
      481 cgccagatcg cgaccatgat gacctccggc gtgccgctgg tgcagtcgtt cgacatcatc
      541 gccgacggcc agaagaacgt ccgcttcaag aacatgctga tcgacgtgaa gcaggggctg
      601 gaaggcggcc agtcgctgca cgaggcgctg ggtcgctacc cggtgcagtt cgacgagctg
      661 taccgcaacc tggtgcgcgc gggcgaggcg tccggcgtgc tcgataccgt gctggacacg
      721 gtcgccacct acaaggaacg caccgaggcg ctgaagaaga agatcaagaa agcgctgttc
      781 tacccgatca tggtgatcgc ggtggcgttc ctagtcagca tgatcatgct gctgttcgtg
      841 gtgccggtgt ttgcacaaac gttcaaggac gccggcgcgg cgctgccggc gccgacccag
      901 ttcgtggtca gcgcttccga gttcatgaag agctggtggt ggctggtgat cctcatcgtc
      961 gtcggcagcg tggtggggct ggtcgagggc aagcggcgct cggtcaagtt tgcccacgcg
     1021 atggatcgcc tgacgctcaa gctgccggtg ttcggcaaga tcatgcgcga gtcggccatt
     1081 gcccgcttcg cgcgtacgct cggcgtcacc ttccacgccg gcgtgccgct ggtcgaggcg
     1141 ctggattcgg tttccggcgc caccggcagc attgtctacg gcgaggccgt gaagcagatg
     1201 cgcgacgaca tctcggtggg ccaccagctg caactggcga tgaagcagac caacctgttc
     1261 cccaacatgg tggtgcagat gaccgccatc ggcgaggaat ccggcgcgct ggacagcatg
     1321 ctgttcaagg tggccgagtt ctacgaggaa gaggtggaaa acgccgtgga tacgctgtcg
     1381 acgctgctgg agccgctcat catggtgatc ctcggcgtgg tcgtcggcgg catggtggtg
     1441 gccttgtacc tgccgatctt caagctcgcc ggcacgttct gaccctggcg ttgcaggagt
     1501 tcgctcgcgg gcgatgcagt tgctttgaaa ggcattgccc gcgagcgggc tcccacgggg
     1561 acggatgcct cctttcatga ccccgccacg atcttcatcg catgcctgat ttgcccttgc
     1621 ccacctggat tgccctggcc gccgtgctcg gcctgatcgt cggcagtttc ctcaacgtgg
     1681 tgatcctgcg cctgcccgat cgcatggcgg ccgagtggcg gcgcgaggca cgcgacgtgc
     1741 tggagatgga tggcgatgac gcgccgctgc cgcccggcat cgtgcgcgaa ccctcgcact
     1801 gcatgcactg tgggcatgcg ctgtcgccgc tggacaacat cccggtcatc agctggcttt
     1861 tgctgcgcgg gcgttgccgc tactgccacg ccggcatctc catccagtac ccgctggtgg
     1921 agctgttgac cgccgtcgcc agcgcgatcg tggtgtggaa gctcgggccg acctgggccg
     1981 ccctcgccgg cctcggcctg acgtggagtt tgattgcact gtccggcatc gatttccgcg
     2041 tgcagctctt gcccgaccag atcacctacc cgctgctgtg ggccggcctg ctgctcgcgc
     2101 tcgtccccct gttcgtcgcc agccacgccg ccatcgtcgg cacggtcatc ggctatctca
     2161 gcctgtggag cgtgtactgg ctgttcaagc ttttgaccgg caaggaaggc atgggccacg
     2221 gcgacttcaa gctgctggcc gcgctgggcg cgtggatggg gccggtcgcg ctgttgccca
     2281 tcgtgctgct gtcgtcgctg gtcggcgcca tcgtcggcgg cgtgctgatc gcgacccacc
     2341 gccacgaccg cggcgtaccg atgccattcg gcccgttcat cgcgattgcc ggctgggtgt
     2401 ggttcgtggc gggcgatacc ctgctgcacg cctacctgca actggccggc ctgcgatgag
     2461 cggcacggcg cacagctacg tcgtggcact cactggcggc gtggccgccg gcaagagcac
     2521 cgtggcggaa cgtttcgccg cgctgggtgc gccgatccac gacgcggacg tcgcggcacg
     2581 cgaggtgatc gaaccgggca gcgacggcct cgccgcgatc gtgacggcat tcggcaccgg
     2641 cgtgctggcc gccgacggca cgctcgatcg cgtggcgatg cgcaagcgca tctttgccga
     2701 cgccgcggcg cgcaccgcgc tcgaaggcat catccacccg cgcgtgcgca cctggctgca
     2761 cgagcgcgcg cagcacgaaa ccgcgcccta ctgcctgctc gccatcccgc tgctggtgcg
     2821 caacatcgac cactaccgct gggtcgaccg cgtattgctg gtggatgcgc cggaaaccgc
     2881 gcagctcgct cgcctcaccc aacgcgacga tatcgacccg aacctggcgc agcgcatgct
     2941 ggcgcaacaa gccagccggg ccgagcgcct ggcgatcgcc gacgacgtga tcgacaacag
     3001 cggcgacgca gcggcgctgg atgctgccgt cgcagccttg catcggcgtt atcttgagtt
     3061 ggcggccggg cgtgccaggc cctgaatggt gagtcggcgc tgtagtgccg cgacagcgaa
     3121 ccccatcccc tccaaacctc cccttgaaga ggaggctccg aagcatgggg tgcaggcctt
     3181 ggagacgagt gaatatcagg gcaggtgcgg gtagccggca aagtccagcc gcacggcgcg
     3241 gccgtcggcc cgcaaccgcg ccggtgcgcc gaacggcaag gtgtacttgt cggccgcatg
     3301 gccgaacggc aggccatcca gcaccgggac gcccgccacg cggcggacct gcgcgaaggc
     3361 cgcggcgagg tcgtagccgt tgtcgcgcgg gccggtgcgg caatcggtga agtcgccgag
     3421 gatcagcgcg tgctgcctgg ccaatacgcc ggcgaggtgc agctggtaca gcatgcgctc
     3481 gatgcggaac ggcggctcgc cgacgtcctc gacgaacagg atgccgccgt cgatgcgcgg
     3541 aaagtacggc gtgcccagca ggctgcagat catcgcgaga ttgccgcccc acaacgggcc
     3601 ctcgagatcc agcgcgtgct cgccgctgct ggcccactcc gcgctgccct gcgccgcgcg
     3661 cacggtgcgc cagaagtgcg gcaccgtcag cgcactgaga tgctccgcac cgaaatcgg
//
LOCUS       DASSVL010000065         3676 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_509674, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000065 DASSVL010000000
VERSION     DASSVL010000065.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3676)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3676)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3676
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_509674"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..292
                     /locus_tag="VFM52_01080"
     CDS             <1..292
                     /locus_tag="VFM52_01080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007509375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0017150 - tRNA dihydrouridine synthase
                     activity [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="tRNA-dihydrouridine synthase"
                     /protein_id="HET8763792.1"
                     /translation="IFREIAHYLATGELLPEPTPAEVATILIGHLEHLYAFYGEEAGV
                     RIARKHLGWYAKDRPENAAFRQVANRAETAREQLRLTRDYFDALAAGVALAA"
     gene            complement(297..1082)
                     /locus_tag="VFM52_01085"
     CDS             complement(297..1082)
                     /locus_tag="VFM52_01085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007081513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HET8763793.1"
                     /translation="MNTRIAIPRSRTRFALGLLGLAVLMLVWSAGIRVLNADGTPMAA
                     ALAPGEALRSLWELIANNELTRHTLTSLRRVLVSLVAALVLGVPIGVAVGSSRLLDAA
                     TSAPFQFLRMISPLSWMPIAVMAFGIGDMPIYFLLTITAVWPIILNTAAGVRQLDPGW
                     LLLGRSLCATRGEMLRRIVVPGILGHVLTGVRVAIGMIWILLIPCEMLGVSSGLGYFI
                     LDTRDRLAYSELMAAILLIGALGFLLDGAAQWLHRRWARGGEG"
     gene            complement(1120..2322)
                     /locus_tag="VFM52_01090"
     CDS             complement(1120..2322)
                     /locus_tag="VFM52_01090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007081514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HET8763794.1"
                     /translation="MPDHSGDIAPSRRRFLKLSALFTAAGALPLLQNFERAVAAEPDA
                     PVRIGYLPITDATPLLVAHQRGLFQAQGLAVERPRLFRSWAEIVEAFLAGQVNVVHML
                     SPMTVWARYGSKSPSKVVAWNHVCGSALAAAVRPNVARLEDIAGTTFAIPFWYSVHNV
                     VLQHLLKHAGITPIGSGTPGPKQVKLVVMAPSDMLPALAGGRISGYIVAEPFVALAEI
                     LKVGKVLRFTGDVWKDHACCVVQMHERDLNQRPEWTQKVVNAIVQAQAWTREHRDETA
                     HLLAKDASGHYTPHAYPALAKVLAPPASDDAFYVKSGAIRHPEWHQHRIDFQPYPYPS
                     YTETLVNLLKGTYVEGRNEFLAKLDPAFAARDLVDDRFVKKAIAAAGGMQAFGAPDGF
                     TRSEAIST"
     gene            complement(2350..3174)
                     /locus_tag="VFM52_01095"
     CDS             complement(2350..3174)
                     /locus_tag="VFM52_01095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007081515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HET8763795.1"
                     /translation="MTDQPTPLHPAILDASHIALSYGRARQARHLVLRDFSLQLRAGE
                     IVAVLGPSGAGKSSLLRVLGGLQRPDGGSVRVRGEVLRDTHPRVSLMFQDPCLLPWLT
                     LEQNVGFGLDFARQPAVDRAERQRRVHALIEEVGLTAALGRYPAELSGGMAQRVALAR
                     SLVRRPELLLLDEPFSALDEITRGEMQQLLLTLAKRSHTAAVLVTHDIDEALLLADRI
                     LLLGGAPAELLGEWAIDAAQPRDAVSGELTRLRVDIVQALRDARAEAPAAAERAVA"
     gene            complement(3279..>3676)
                     /locus_tag="VFM52_01100"
     CDS             complement(3279..>3676)
                     /locus_tag="VFM52_01100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007081517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase"
                     /protein_id="HET8763796.1"
                     /translation="GVGVVDACLKVLHENRGGQHDINAYLDVQEDDLQAARDALVSDA
                     DRLAAQAQAGTAALLPVLRLRAAASELALRAGNAAVLHAGARGYIRRHAAQRLLREAV
                     FVAIVTPALKHLRKEIHDLEQSALRAEAA"
BASE COUNT          591 a         1290 c         1288 g          507 t
ORIGIN      
        1 gattttccgc gagatcgcgc attacctcgc caccggcgag ctgctgcccg agccgacgcc
       61 ggcggaggtc gcgaccatcc tcatcggcca tctcgaacac ctctacgcgt tctatggcga
      121 ggaggccggt gtgcgcatcg cgcgcaagca cctcggctgg tacgcgaagg atcgcccgga
      181 aaacgccgcg ttccggcaag tggcgaaccg cgcggaaacc gcacgcgagc aactgcgcct
      241 gacgcgcgac tacttcgacg cgctggccgc gggcgtcgcg ctcgccgcct gaaacatcag
      301 ccttcgccgc cgcgcgccca gcgccggtgc agccactgcg cggcgccatc gagcaggaac
      361 ccgagcgcgc cgatcagcag gatcgccgcc atcagctccg agtacgcgag gcggtcgcgg
      421 gtgtcgagga tgaaatagcc gaggccggag ctgacgccga gcatttcgca cggaatgagc
      481 aggatccaga tcatgccgat cgcgacgcgc acgccggtca gcacgtggcc gaggatgccc
      541 ggcaccacga tccgccgcag catttcgccg cgcgtcgcgc acaggctgcg gccgagcagc
      601 agccagcccg ggtcgagctg gcgcacgccg gcggcggtgt tcaggatgat cggccacacc
      661 gcagtgatgg tcagcaggaa atagatcggc atgtcgccga tgccgaacgc catcaccgcg
      721 atcggcatcc acgacaacgg cgagatcatg cgcaggaact ggaacggcgc gctggtggcc
      781 gcatccagca ggcgcgagct gcccaccgcc acgccgatcg gcacgccgag caccagcgcg
      841 gcgacgaggc tcaccagcac ccggcgcagg ctggtgaggg tgtggcgggt cagctcgttg
      901 ttggcgatga gctcccacag gctgcgcagc gcctcgcccg gcgcgagcgc tgccgccatc
      961 ggcgtgccgt ccgcgttgag cacgcggatg ccggcagacc acacgagcat cagcaccgcc
     1021 aggccaagca ggccgagtgc gaaacgcgtg cgggaacggg ggatggcgat acgggtattc
     1081 atgggcacaa ccggcgacgc gcgggcgccg cgcaagagtt caagtactga tggcttcgct
     1141 gcgggtgaaa ccatcgggtg cgccaaacgc ctgcatgcca ccggccgcgg cgatcgcctt
     1201 tttcacgaag cggtcgtcga ccaggtcgcg cgcggcgaac gccggatcga gcttggcgag
     1261 gaactcgttg cggccttcga cgtaggtgcc cttgagcagg ttcaccagcg tttcggtgta
     1321 gctcggatac ggatacggct ggaagtcgat gcggtgctgg tgccactccg ggtgacggat
     1381 ggcgccgctc ttcacgtaga acgcgtcgtc cgaggccggc ggcgcgagca ccttggccag
     1441 cgccgggtag gcgtgcggcg tgtagtggcc gctggcgtcc ttggccagca ggtgcgcggt
     1501 ctcgtcgcgg tgctcgcgcg tccacgcctg cgcctgcacg atcgcgttga cgaccttctg
     1561 cgtccattcc gggcgctggt tcaaatcacg ctcgtgcatc tgcaccacgc agcaggcgtg
     1621 gtccttccac acgtcgccgg tgaagcgcag caccttgccc accttgagga tctcggccag
     1681 cgccacgaac ggctcggcca cgatgtagcc ggagatacgc ccgccggcga gcgccggcag
     1741 catgtccgac ggcgccatca ccaccagctt cacctgcttc ggccccggcg tgccgctgcc
     1801 gatcggggtg atgccagcgt gcttcagcaa gtgctgcagc accacgttgt gcaccgaata
     1861 ccagaacggg atggcgaacg tggtgccggc gatgtcttcg agcctggcca cgttcggccg
     1921 cacggcggcg gccagcgccg agccgcacac gtggttccac gcaacaactt tggagggcga
     1981 cttgctgccg taacgcgccc acaccgtcat cggcgacagc atgtgcacca cgttgacctg
     2041 gccggcgaga aacgcctcga cgatctccgc ccagctgcgg aacaggcgcg gccgctccac
     2101 cgccagcccc tgcgcctgga acaggccgcg ctggtgggcg accagcaagg gcgtggcgtc
     2161 ggtgatcggc aggtagccga tgcgcaccgg cgcgtccggc tcggcggcca ccgcacgctc
     2221 gaaattctgc agcagcggca gcgcgccggc ggcggtgaac aaggccgaga gcttgagaaa
     2281 gcggcggcgc gagggcgcga tgtccccgga atggtcaggc atgggaatct cgatggaagg
     2341 gcggaaggat caggcgacgg cgcgttcggc cgctgccggc gcctcggcgc gggcgtcacg
     2401 caaggcctgc acgatgtcca cgcgcagccg ggtcagctcg ccggataccg cgtcgcgcgg
     2461 ctgcgcggcg tcgatcgccc actcgccgag cagttcggcc ggcgcgccgc caagcaacag
     2521 gatgcggtca gccagcagca gcgcctcgtc gatgtcgtgg gtgaccagca ccgccgcggt
     2581 gtggctgcgc ttggccagcg tcagcagcaa ttgctgcatt tcgccgcggg tgatctcgtc
     2641 tagcgcgctg aatggctcgt ccagcagcaa caactccggc cggcgcacca ggctgcgcgc
     2701 cagcgccacg cgctgcgcca tgccgccgga cagctccgcc gggtagcggc cgagcgccgc
     2761 ggtcaggccg acttcttcga tcaacgcgtg cacccggcgc tggcgctccg cacgatccac
     2821 cgctggctgg cgcgcgaagt cgaggccgaa gccgacgttc tgctccaggg tcagccacgg
     2881 cagcaggcat gggtcctgga acatcaggct gacgcgcggg tgggtgtcgc gcagcacttc
     2941 gccgcgcacc cgcacgctgc cgccgtcggg ccgctgcaag ccgcccagca cgcgcagcag
     3001 cgaggacttg ccggcaccgc tcgggccgag cacggcaacg atctcgccgg cccgcagctg
     3061 cagcgagaag tcgcgcagca ccagatgccg ggcctggcgc gcacgcccat agctcagcgc
     3121 gatatggctg gcatcgagga tggcagggtg cagcggcgtg ggttggtcgg tcatcgcggt
     3181 ggtgctcgaa gtctcggatg gaaggagttc gtccctgcgt atcgccatgt cgggacaacg
     3241 ccctgcgtcc gacttcaatg cggcggccac cggcgccatc acgccgcctc ggcgcgcagc
     3301 gcggactgct caaggtcgtg gatctccttg cgcaggtgct tcagtgccgg ggtgacgatg
     3361 gcgacgaaca ccgcctcgcg cagcaggcgc tgcgccgcat gccggcggat gtagccgcgc
     3421 gcgccagcgt gcagcaccgc ggcattgccg gcgcgcagcg ccagctcgga agccgccgcg
     3481 cgcaggcgca ataccggcag cagcgccgcc gtgcccgcct gcgcctgggc cgcgagccgg
     3541 tcggcatcgc tgaccagcgc gtcgcgcgcg gcctgcaggt cgtcttcctg cacgtcgagg
     3601 taggcattga tgtcgtgctg cccgccgcgg ttttcgtgca gcaccttcag gcaggcgtcg
     3661 accacaccca cgccca
//
LOCUS       DASSVL010000066         2730 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_764317, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000066 DASSVL010000000
VERSION     DASSVL010000066.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2730)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2730)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2730
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_764317"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..311
                     /locus_tag="VFM52_01105"
     CDS             <1..311
                     /locus_tag="VFM52_01105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017461062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="2OG-Fe(II) oxygenase family protein"
                     /protein_id="HET8763797.1"
                     /translation="LTREGQWLPITTAGDAIVVNIGDMLQRLTNHVYPSTTHRVVNPA
                     GADAGKPRYSVPFFLHPNPDVVLDPLPECITPDNPRRYATSITAHEYLQERLREIKLI
                     "
     gene            complement(330..1136)
                     /locus_tag="VFM52_01110"
     CDS             complement(330..1136)
                     /locus_tag="VFM52_01110"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008215419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HET8763798.1"
                     /translation="MTPEHPLSLVTGASSGIGAAFAEALAARGHELVLTARRADRLQA
                     LAERLHRQYGCTPTVLPADLGDRSAPQHLCDELVERGLRVDWLINNAGYGVPGSFLAS
                     DWPVHARFQQVLANAPLELAWRLLPGMRERGYGRIVNVASLAGLVPGTAGHTLYAPVK
                     AMLIKFSQGLALENREHGVHVCALCPGFTRSEFHDVTGTRPLMNRLPRFMWQTAEAVV
                     REGIDAVEHGEPVHVCGRVNRIIKSAFKLLPDRLGFYLSAREARRYRNRD"
     gene            1264..2013
                     /gene="tpiA"
                     /locus_tag="VFM52_01115"
     CDS             1264..2013
                     /gene="tpiA"
                     /locus_tag="VFM52_01115"
                     /EC_number="5.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008215417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004807 - triose-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="triose-phosphate isomerase"
                     /protein_id="HET8763799.1"
                     /translation="MRKKIVAANWKMYGSQAMATSLCEAIAAARPAHCDVLVCPPHPY
                     LSDAARICVAAGIGVGGQDVSEHVEPGAYTGEVSASMLADCGARWVIVGHSERRHYHH
                     ESNELVARKFAAALAGGLTPVLCVGETLAQRQAGETDTVIAAQVGAVLAKCGVAAFDA
                     AMIAYEPVWAVGTGHAATPQQAQHVHAFIRSQLEKEDARIARLTRLLYGGSVKPANAA
                     ELFAQPDVDGGLIGGASLVASDFLGICAAAH"
     gene            2037..2477
                     /gene="secG"
                     /locus_tag="VFM52_01120"
     CDS             2037..2477
                     /gene="secG"
                     /locus_tag="VFM52_01120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019466810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecG"
                     /protein_id="HET8763800.1"
                     /translation="MFVVFSVFYILIGAAMTVLILLQNGEGANAGSGFGGGASATVFG
                     ARGSANFLTRATAVLGAIFFALSLGMGMYLHSHGAQQSQQASLGVMAGVGEAQKAPAQ
                     PSPAKPANPEVPAATPAGNTAVPAAPTTQQQSGVPAAPAPQKQN"
     gene            2486..2570
                     /locus_tag="VFM52_01125"
     tRNA            2486..2570
                     /locus_tag="VFM52_01125"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2520..2522,aa:Leu,seq:gag)
BASE COUNT          464 a          908 c          910 g          448 t
ORIGIN      
        1 tgctgacccg cgagggccag tggctgccga tcaccaccgc gggcgacgcc atcgtggtca
       61 acatcggcga catgctccag cggctgacca accatgtata cccgtccacc acccaccgcg
      121 tggtgaaccc ggcgggcgcc gacgccggca agccgcgcta ttcggtgccg ttcttcctgc
      181 accccaaccc cgatgtcgtg ctcgacccgc tgcccgagtg catcacgccg gacaacccgc
      241 gccgctacgc cacctcgatc accgcgcacg agtatctgca ggagcggctg cgggaaatca
      301 agctgatctg agccggggcg gggcggcgct caatcgcggt tgcggtagcg ccgggcttcg
      361 cgggcggaga gatagaaccc caggcggtcg ggcagcagct tgaacgcgct cttgatgatg
      421 cggttcaccc ggccgcacac gtgcaccggc tcaccgtgct cgacggcgtc gatgccttcg
      481 cgcaccactg cctccgcggt ttgccacatg aaccgcggca ggcggttcat caacggccgc
      541 gtgccggtga cgtcgtggaa ctcggacctg gtgaacccgg gacacagcgc gcagacgtgc
      601 acgccatgct cgcggttttc cagtgccagt ccctgggaaa acttgatgag catcgctttc
      661 accggggcat acagcgtgtg tcctgccgtg cccggcacca ggccggcgag cgaggccacg
      721 ttgacgatgc gcccgtagcc gcgctcgcgc atgccgggca acagccgcca ggcgagttcg
      781 agcggcgcgt tggccagcac ttgctggaaa cgcgcatgta ccggccagtc gctggcgaga
      841 aagctgccgg gcacgccgta gccggcattg ttgatcagcc aatccacgcg caagccgcgt
      901 tccaccagct cgtcgcacag atgctgcggc gcagaacggt cgcccaggtc cgccggcaag
      961 acagtcggcg tacagccgta ctgccggtgc aatcgctccg ccaacgcctg caggcgatcc
     1021 gcgcggcgcg cggtcagcac cagctcgtgg ccacgtgcgg ccaacgcctc cgcgaaggcc
     1081 gcgccgatgc cggacgaggc accggtcacg aggctcaagg gatgttcggg agtcatcgtc
     1141 gttccgtggg agagagggcg gccagggcca tgttgcggcg ctccagacac cgttgtcagt
     1201 ttgcggcgcg tcgtagccgc cacctagaat ttacgccctg tttcggggga acaccgttga
     1261 atcatgcgaa aaaaaatcgt tgcagcgaac tggaagatgt acggcagtca ggcaatggcg
     1321 acgtcgctgt gtgaagcgat tgccgcagca aggccggcgc attgcgacgt gctggtctgc
     1381 ccgccgcatc cttatctctc cgacgcagcg cgcatctgcg tggcggcagg gatcggtgtc
     1441 ggcggacagg atgtcagcga acacgtcgag ccgggtgcct ataccggcga ggtttccgcg
     1501 tcgatgctgg ctgattgcgg cgcccgctgg gtgatcgtcg gccattccga gcggcgccat
     1561 taccaccatg aatccaatga gctggtggca cgcaagttcg cggccgcgct ggccggcggg
     1621 ctgacgccgg tgctgtgcgt cggcgaaacg ctggcgcagc gccaggccgg cgaaaccgat
     1681 accgtcatcg cggcgcaggt cggtgcggtg ctggccaagt gcggcgtggc tgcttttgat
     1741 gccgccatga tcgcctacga gccggtgtgg gcggtcggca ccggccacgc cgccacgccg
     1801 cagcaggcac agcacgtcca tgccttcatc cgtagccaac tcgaaaaaga agatgctaga
     1861 attgcccgtc tgacccggct gctttacggc ggcagcgtca agccggccaa cgcggccgag
     1921 ctgtttgcac aaccggatgt ggacggcggg ctcatcggtg gggcctcgct cgtcgcttcc
     1981 gacttcctcg gaatctgcgc ggcggcgcat tagtcgccac aggctcgacc acagacatgt
     2041 ttgtcgtttt cagcgtgttt tacatcctga tcggcgcggc catgaccgtg ctgatcctgt
     2101 tgcaaaacgg cgaaggtgcg aacgccggct ccggctttgg cggtggcgcc tcggccaccg
     2161 tgttcggtgc ccgcggctcg gccaacttcc tgacccgcgc caccgcggtg ctcggcgcga
     2221 tcttcttcgc gctcagcctc ggcatgggca tgtacctgca cagccacggt gcccagcaga
     2281 gccagcaggc cagccttggc gtgatggccg gggtaggcga ggcacagaag gcgccagccc
     2341 aaccgtcccc tgccaagccg gccaacccgg aagtaccggc ggcgaccccg gcaggcaaca
     2401 ctgcagtacc cgcggcgccg accacgcaac agcaatccgg tgtgccggcg gcacccgcac
     2461 cgcagaagca gaactgatcg aacaagccca ggtggcggaa ttggtagacg cactaccttg
     2521 aggtggtagc gccgagaggc gtgggggttc gagtcccccc ttgggcacca atataagtat
     2581 cacgcaacaa cgctaaagcc ctggttgcca gggctttttc tttgtctgtt ggtggggcgg
     2641 tggtggccac ccggagcgca cgatggtcgt gcgcgggaca ggttcgcgtt ggtgtccatc
     2701 aaggtacgct tgccagggtc ggctgtttcg
//
LOCUS       DASSVL010000067         3025 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_990243, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000067 DASSVL010000000
VERSION     DASSVL010000067.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3025)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3025)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3025
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_990243"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..150
                     /locus_tag="VFM52_01130"
     CDS             <1..150
                     /locus_tag="VFM52_01130"
                     /inference="COORDINATES: protein motif:HMM:NF013847.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8763801.1"
                     /translation="VHKALEVLRSDQLWINPDCGLKTRRWAEVEPALEHMAQSARGLR
                     AEIPA"
     gene            245..1564
                     /locus_tag="VFM52_01135"
     CDS             245..1564
                     /locus_tag="VFM52_01135"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:NF044950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GGDEF domain-containing protein"
                     /protein_id="HET8763802.1"
                     /translation="MEPSQPDSPTPATIDQIRQRETQWRRVGGLLHRLLTQLAAPAMP
                     HDAALDATLDQLREVVGHPTDAARIPVLLKALAQATQAIEAPAAAPAPLAPDSSPALG
                     ELLLAVLDRLEPDEQSAAETEALRCAIAGCNDLAALREHGQQLAELVSGQLRRLAADR
                     RAAVRVLHELRGELKAMADDIEQSEAARADDASTRGELDTRILDDVQAIDRCVDAAID
                     LAELRHALQAHLATIRSHLATLREREHAREDAWRQRVGNLRRRVQKLEQGAREMENML
                     VTRGHLLDTDALTGLANRRALDARMATLAASAAGARCVLMMDIDHFKDINDRLGHGAG
                     DRALRIVAEQLQATLRPGDFLARYGGEEFLAIVEADLPEALEIAERLRGRLERTRFRS
                     RQQPVQLTLSCGITVVRADDTPAAVLERADQALYRAKRAGRNRCESM"
     gene            1764..2975
                     /gene="metK"
                     /locus_tag="VFM52_01140"
     CDS             1764..2975
                     /gene="metK"
                     /locus_tag="VFM52_01140"
                     /EC_number="2.5.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014401850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004478 - methionine adenosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006556 - S-adenosylmethionine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine adenosyltransferase"
                     /protein_id="HET8763803.1"
                     /translation="MSNSLFTSESVSEGHPDKVADQISDAVLDAIIAQDPRARVACET
                     MVKTGVAIVAGEITTSAWIDLESITRKVILDIGYNSSDVGFDGATCAVVNLIGKQSPN
                     INQGVDRKKPEEQGAGDQGLMFGYATNETRDYMPAAIYYSHRLVERQAKVRKQKHSPL
                     PWLRPDAKSQVTLRYENGVATAIDAVVLSTQHAPGVKQKDLVEAVREHIIKPVLPAKL
                     LHKGTKFHINPTGKFEIGGPVGDCGLTGRKIIVDTYGGWARHGGGAFSGKDPSKVDRS
                     AAYAARYVAKNIVAAGIADRCEVQVSYAIGVAEPTSISVTTFGTGKIPDEKIEKLIRK
                     HFDLRPYGIIKMLDLIHPIYQRTASYGHFGRSPVEIKDANGNVFTAFSWEKTDKAEAL
                     RADAGLGGRRK"
BASE COUNT          528 a         1089 c          993 g          415 t
ORIGIN      
        1 gtccacaagg cgctcgaggt gctgcgctcc gaccaactgt ggatcaaccc cgattgcgga
       61 ctgaagaccc ggcgctgggc cgaagtggag ccggccctgg agcacatggc gcaaagcgcg
      121 cgcgggctgc gtgccgagat cccggcgtga accttggcgg cgcgggcggc cagcgtccgc
      181 gccgccatgc cgggacggcg cacaacacct agaatggcgc cgtcccgacc ggctggagcc
      241 gctgatggaa ccttcacaac ccgactcgcc gacgccggcc acgatcgacc agatccggca
      301 gcgcgagacg caatggcgcc gggttggcgg gttgctgcat cggctgctca cccagctggc
      361 cgcacccgcc atgccgcacg atgcggcgct ggacgccacc cttgaccagt tgcgcgaagt
      421 cgtggggcac ccgaccgacg cggcgcgcat cccggtactg ctgaaggccc tggcccaggc
      481 cacccaggca atcgaggcgc ccgctgccgc accggcaccg ctggcaccgg attcgtcgcc
      541 ggcactcggc gagctgctgc tcgcggtgct ggatcgtctc gaacccgacg agcaatccgc
      601 ggccgaaacg gaggccctgc gttgcgcgat tgccggctgc aacgacctgg ccgcgttgcg
      661 cgaacacggc cagcagctgg cggagctggt cagcggccag ctgcgccggc tcgccgcgga
      721 ccggcgtgcc gcggtgcgcg tgctgcacga gctgcgcggc gagctgaagg cgatggccga
      781 cgacatcgaa caaagcgagg ccgcccgcgc cgacgatgcc agtacccgcg gcgagctcga
      841 tacgcggata ctcgacgacg tgcaggccat cgaccggtgc gtggacgccg ccatcgacct
      901 cgcggagcta cgccacgcgc tgcaagccca cctggccacc atccgcagcc atctcgccac
      961 cctgcgcgag cgcgagcacg cccgcgagga tgcatggcgg cagcgcgtcg gcaacctgcg
     1021 ccggcgcgtg cagaagctgg aacagggcgc gcgtgagatg gaaaacatgc tggtcacgcg
     1081 cggtcacctg ctggacaccg acgcgctgac cgggctggcc aatcgccgcg ccctcgacgc
     1141 acgcatggcg acgctcgcgg cgtcggccgc cggcgcgcga tgcgtgctga tgatggacat
     1201 cgaccacttc aaggacatca acgaccggct cggccacggt gccggcgacc gcgcgctgcg
     1261 catcgtcgcc gagcaactgc aggccaccct gcgccccggt gatttccttg cccgctacgg
     1321 tggcgaggag ttcctcgcaa tcgtcgaggc ggacctgccg gaagcgctgg aaatcgccga
     1381 acggctgcgt ggccggctcg aacgcacgcg ctttcgcagc cgccagcaac ccgtgcagct
     1441 gaccctgtcg tgcggcatca ccgtggtgcg cgcggacgac acgccggcgg ccgtcctcga
     1501 acgcgcggac caggcgctgt atcgcgccaa gcgcgccggc cgcaaccgct gcgagtcgat
     1561 gtgacactgc cctccccgcc acgcaacggc gccgccgtgc cttggcccct gttcaccacc
     1621 gtcatccatg gccgcccgcc ggccacccgc ggacgtccat ccgtccattt gcccgccgtg
     1681 gttgctgcat cgacatggcg cgcgatgcta tgatgtcgaa cctttgttta tctctctatc
     1741 cgtagagaag gatatttccc gcgatgagca actccctgtt cacctccgaa tcggtctccg
     1801 agggccatcc ggacaaggtc gccgaccaga tttccgacgc cgtgctggac gcgatcatcg
     1861 cgcaggatcc gcgcgcccgc gttgcctgcg agacgatggt caagacgggc gtcgcgatcg
     1921 ttgcaggcga aatcaccacc agtgcgtgga tcgatctcga gtcgatcacc cgcaaggtga
     1981 tcctggacat cggctacaac tcctccgacg tcggcttcga cggcgccacc tgcgccgtgg
     2041 tgaacctgat cggcaagcag tcgcccaaca tcaaccaggg cgtggaccgc aagaagccgg
     2101 aggaacaggg cgccggcgac cagggcctga tgttcggcta cgcgaccaac gagacccgcg
     2161 actacatgcc cgcggcgatc tactactcgc atcgcctcgt cgagcgccag gccaaggtgc
     2221 gcaagcagaa gcactcgccg ctgccgtggc tgcgtccgga cgcgaagagc caggtcacgc
     2281 tgcgctacga gaacggtgtc gccaccgcga tcgacgccgt ggtgctgtcc acccagcatg
     2341 cgccgggcgt gaagcagaag gacctggtcg aggccgtgcg cgagcacatc atcaagccgg
     2401 tgctgccggc caagctgctg cacaagggca ccaagttcca catcaacccg accggcaagt
     2461 tcgagatcgg cggcccggtc ggcgactgcg gcctgaccgg ccgcaagatc atcgtcgaca
     2521 cctacggcgg ctgggcccgc cacggcggcg gcgcgttctc cggcaaggat ccgtccaagg
     2581 tcgaccgttc ggccgcctac gccgcacgct acgtggcgaa gaacatcgtg gctgccggca
     2641 ttgccgaccg ctgcgaggtg caggtgagct acgcgatcgg cgtcgccgag ccgacctcga
     2701 tctcggtgac cacgttcggc accggcaaga ttccggacga gaagatcgag aagctcatcc
     2761 gcaagcactt cgacctgcgt ccatacggca tcatcaagat gctcgacctg atccacccga
     2821 tctaccagcg cacggcgagc tacggccact tcggccgcag cccggtggag atcaaggacg
     2881 cgaacggcaa cgtcttcacc gcgttctcgt gggaaaagac cgacaaggcc gaggcgctgc
     2941 gcgccgacgc cgggctgggc ggcaggcgca agtaagcgtt gccgacagcc agcatcgacg
     3001 ggccgccacg cgcggccctt ttttt
//
LOCUS       DASSVL010000068         2342 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_199094, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000068 DASSVL010000000
VERSION     DASSVL010000068.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2342)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2342)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2342
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_199094"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1233)
                     /locus_tag="VFM52_01145"
     CDS             complement(<1..1233)
                     /locus_tag="VFM52_01145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8763804.1"
                     /translation="MNDRNDPSSRDSLRRTEPKLGNLDHVDAGADRRTTMRADPADRP
                     PFANTTRRQRAQRKPFRAPWLVLAIVAVLAVAGGWAFTHQATLSGLLPQTQLNSLLTR
                     ADKAYAEGKLSGSPESARDLYEAARALDPDNEQALTGLQNVGHSELVRAQAALTQGDY
                     ASARTSLEEARSLLGGGADVTAVDQALAKAVLHNANVGVLIDQARAALGNGRIDGDDG
                     AAALFGKVLAGDPHNAVARHGMNQVGDALASRIQTQLGNGDRAGARQTLTRLSGLLPG
                     YSQLPTLRANIAAAGRAADAQRDQYLAQGQADLRAGKMTGSGNDNAEAQFKAALAADP
                     GNAAAQAGLGQVAEALIVQANAAIDAGHAHDAKNLLDQAAALAPKSADLAAARSRLGA
                     VGKAPAVAAESAPPTPVLS"
     gene            complement(1402..>2342)
                     /locus_tag="VFM52_01150"
     CDS             complement(1402..>2342)
                     /locus_tag="VFM52_01150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007512753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ACT domain-containing protein"
                     /protein_id="HET8763805.1"
                     /translation="ATVLDFAYHVHTMVGHRCRGAKVNGRIVPLTCQPASGDRIEILT
                     AREPAPSRDWLSPQLGYLNTASARGKLRAWFRREDLAANLAAGRQILEREARRLAVSD
                     ESMDRLPTRLGRKGRDDLLVGLALGEVGIAQLTRAMLEAQPAAPAPALPPRKVASALD
                     KPGALTVEGVGNLLTTLARCCRPLPGDDVAGFVTRGRGVTVHRADCASLARLRARSPD
                     RVIEVRWQSAPDRAYEVDILVLGYDRRDLQRDITNIVTNSGARIVASDSHSDRDLGEV
                     TLHFTLRVHDFGELSALLSRLSALPNVTEARRLAAG"
BASE COUNT          328 a          816 c          830 g          368 t
ORIGIN      
        1 actcaaaacg ggcgtgggcg gcgccgattc agccgcgacg gcgggcgcct tgccaacggc
       61 gcccaggcgc gaacgcgcag cggccaggtc ggccgatttc ggcgcaagcg cggcggcctg
      121 gtcgagcaga tttttcgcat cgtgcgcatg cccggcgtcg atcgcggcat tggcctgcac
      181 gatcagcgct tcggcgacct gccccaaacc ggcttgtgcg gcggcattgc ccggatcggc
      241 cgccagcgcg gccttgaact gcgcttcggc gttgtcgttg ccgctgccgg tcatcttgcc
      301 cgcgcgcagg tccgcctgac cttgcgcgag atattggtcg cgttgcgcat ccgcggcgcg
      361 ccccgcggca gcgatgttgg cgcgcagcgt cggcagctgc gaataccctg gcagcaggcc
      421 cgacaggcgc gtgagtgtct ggcgtgcgcc ggcacgatcg ccgttgccga gttgggtctg
      481 gatgcgcgac gcaagcgcat caccgacctg gttcatgccg tgccgggcga ccgcgttgtg
      541 cggatcgcca gcgagcacct tgccgaacaa tgccgcggca ccgtcgtcgc cgtcgatgcg
      601 gccgttcccg agcgccgcgc gcgcctggtc gatcagcacg ccgacgttgg cgttgtgcag
      661 caccgccttg gcgagcgcct ggtcgaccgc ggtcacgtcg gcaccaccac ccaggaggct
      721 gcgcgcctct tccagcgaag tgcgcgcgga agcgtagtcg ccttgcgtca gcgccgcctg
      781 tgcccgcacg agctcggagt gcccgacgtt ctgcaatccc gtcagcgcct gctcgttgtc
      841 ggggtcgagc gcccgcgcgg cttcgtacag gtcgcgcgcg ctctcggggc tgcccgaaag
      901 cttgccttcc gcgtaagcct tgtcggcgcg cgtcaacagc gaattcaact gggtttgcgg
      961 cagcaggccg ctgagcgtcg cctgatgcgt gaatgcccaa ccgccggcca ccgccagcac
     1021 ggccacgatg gcgagcacca gccacggcgc gcggaacggt ttgcgttgcg cgcgctgacg
     1081 gcgggtggtg ttcgcgaagg gcggacggtc cgctggatcc gcgcgcatgg tcgtgcgccg
     1141 atcggctccc gcgtcgacgt gatcgaggtt gccgagcttc ggctcggtgc gccgcaggct
     1201 gtcccgcgaa gaggggtcgt ttcgatcgtt catgccaggg ccagtgcccg ccggaatatc
     1261 cgtcccatgg gaccatcgcg gccgtgcgcc ggttccgtcg ccggaacgct ccgcgtaggc
     1321 tcatcttagc attcgcctcc gatgggtccc gcgcggaacc gcacgcattc agccaccggc
     1381 aagccggcgt gcctcggtga ctcagccggc agcgagccgg cgcgcttcag tcacattggg
     1441 cagtgccgac aacctggaca gcagcgccga cagttcgccg aaatcatgca cgcgcagcgt
     1501 gaaatgcagc gtcacctcgc cgaggtcgcg gtcgctgtgg ctgtccgatg cgacgatgcg
     1561 cgcgccggag ttggtgacga tgttggtgat gtcgcgctgc aggtcgcggc ggtcatagcc
     1621 gagcaccagg atgtccacct cgtaggcgcg atcgggggcg ctctgccagc gcacttcgat
     1681 cacgcggtcc ggactgcgcg cgcgcaggcg cgccagggat gcacaatcag cgcggtgtac
     1741 cgtgacgcca cgtccgcgcg tgacgaaacc ggcgacgtcg tcccccggca gcggccggca
     1801 gcagcgggcg agcgtcgtca gaagattgcc gacaccttca acggtcaatg cgcccggttt
     1861 gtccagggcc gacgcgacct tgcggggcgg caacgccggg gcaggcgccg cgggctgcgc
     1921 ctcgagcatc gcgcgggtca gttgcgcgat gccaacttca cccagggcaa gcccgacgag
     1981 caggtcgtcg cggcccttgc ggcccagccg cgtcggcaac ctgtccatcg attcatcgga
     2041 caccgcgagc cgccgagcct cgcgctccag gatctgccgc cccgccgcaa gattggccgc
     2101 gagatcctcg cgccggaacc atgcgcgcag cttgccgcgc gcgcttgcgg tattgagata
     2161 gccgagttgc ggcgacagcc agtcgcggct cggcgccggt tcgcgcgcgg tgaggatttc
     2221 gatgcgatca ccgctggcgg gctggcaggt cagcgggacg atccggccgt tgaccttggc
     2281 gccgcggcag cggtgcccga ccatcgtgtg cacgtgatag gcgaagtcga gcacggtcgc
     2341 gc
//
LOCUS       DASSVL010000069         2284 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_199107, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000069 DASSVL010000000
VERSION     DASSVL010000069.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2284)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2284)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2284
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_199107"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(29..1312)
                     /locus_tag="VFM52_01155"
     CDS             complement(29..1312)
                     /locus_tag="VFM52_01155"
                     /inference="COORDINATES: protein motif:HMM:NF024257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HET8763806.1"
                     /translation="MSARSLSLFAASLSLVFAFAATAAPARHSTRHHETRHKVSGPAL
                     VVRGDQVSTEGLVDAVATAFADTGDGHLDVTPFNTVDGIDQALSGSVDIAASARPAYF
                     KRTQEAGLTFVPVAWDALVLITNTANPVNNLTLKQLHDIYYGKITNWSQVGGADEKID
                     LDGIASPLDGVQFSFRRLMFGNGDNPVAVPRLFINIDSLQSEVALDTRALALSTLVHA
                     RREKGIKIIPIEGVTPSLATLENATYPLPLTIYLAYKADSPKLATIQKFLTFLGGDKA
                     GGILRSHDLLPYSQAVVLNAKSEKDRINLLGAKMVAEGLPAEYAPGAEFERLSSQSAD
                     LAHAMALQQAAANQVAAANQQRIAMAEAAGVNPSPQATSSAPVSRSSDYTVVSGDTLS
                     KIAKKNSVSVDDLRKWNGLHGDMLKVGQVLKISAQ"
     gene            complement(1531..>2284)
                     /locus_tag="VFM52_01160"
     CDS             complement(1531..>2284)
                     /locus_tag="VFM52_01160"
                     /inference="COORDINATES: protein motif:HMM:NF024578.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="PDZ domain-containing protein"
                     /protein_id="HET8763807.1"
                     /translation="ASINPGNSGGALVNLAGELVGINSMIYSPSGASAGLGFAIPTDL
                     AADVMKQLIAHGKVERGTLGVDAQDLSPRVAAALGIKASNGALITNVLPDSPAAKAGL
                     KPGDLVTRVNGKPIADAQDLRNVQGLAPVGSTLALGVDRGGKSLTIDAKLTAASTQAD
                     GASLDPRLAGASFSDVPSGDSGVEGVSVSSVAPGSRAARNGLASGDVLVGVNNVATPD
                     LAQLRRLFAQHPRVLLLSLVRDGQLVQIQIGG"
BASE COUNT          357 a          745 c          776 g          406 t
ORIGIN      
        1 ccgatcctcc gctttcaaga tggccgcgtc attgcgcgct gatcttcagc acctgtccca
       61 ccttcagcat gtcgccgtgc aggccgttcc acttgcgaag atcatcgacg ctcaccgaat
      121 tcttcttcgc gatcttcgac agcgtgtcgc cgctgacgac ggtgtaatcg gacgatcggg
      181 aaaccggcgc cgatgacgtg gcctgcggcg acgggttcac gccagcagct tccgccatgg
      241 cgatgcgctg ctggttggct gccgccacct gattggccgc ggcctgctga agggccatcg
      301 cgtgcgccag gtcggccgac tggctggaga gccgttcgaa ttcggcgccc ggcgcgtatt
      361 cggccggaag gccttcggca accatcttcg cgccgagcag gttgatgcga tccttctcgc
      421 tcttggcgtt cagcaccacg gcctgcgaat agggcagcag gtcgtggctg cgcaggatgc
      481 cgccggcctt gtcgccgccg aggaaagtca ggaacttctg gatggtggcg agcttcgggc
      541 tgtcggcctt gtaggccagg tagatcgtca gcggcagcgg ataggtcgcg ttttccagcg
      601 tggcgaggct gggcgtgacg ccttcgatcg ggatgatctt gatgcccttc tcgcggcgtg
      661 cgtgcaccag cgtcgagagt gccagcgccc tggtatccag cgcgacttcc gactgcagcg
      721 aatcgatgtt gatgaacagg cgcggcaccg cgaccggatt gtcgccgttg ccgaacatca
      781 ggcggcggaa gctgaattgc acgccgtcca gcggcgaagc aatgccgtcg aggtcgatct
      841 tctcgtcggc tccgcccacc tgggaccagt tggtgatctt gccgtagtag atgtcgtgca
      901 gctgcttcag cgtcaggttg ttcaccgggt tcgcggtgtt ggtgatcaac accagcgcat
      961 cccacgccac cggcacgaag gtcagccccg cctcctgggt acgcttgaag tacgcgggcc
     1021 gcgcgctggc ggcgatgtcg acgctgcccg acagcgcctg gtcgatgccg tccacggtat
     1081 tgaagggcgt gacgtcgaga tgcccgtcgc cggtgtcggc gaacgccgtc gcgaccgcgt
     1141 cgacgaggcc ttcggtgctg acctggtcgc cgcgcacgac cagcgcgggg ccggaaacct
     1201 tgtgccgcgt ttcgtggtgg cgcgtggaat gcctggcggg ggccgcggtg gcggcgaaag
     1261 cgaaaacgag ggagagcgaa gcggcgaaca gactcaacga acgtgctgac atgaacgatt
     1321 taccgggtga cggtgtggag ggaagggtcc gggcgattat ggcggaatcg atcgtgcttg
     1381 cggcaatgcc gttcagcttg ccgcgcagta ttggctgaca ccgctcacat tctgcggcga
     1441 gaatgcatcc atgctgcgct cgccggcccg cacatcggtg tgcgggcgtt cgtcggcgcg
     1501 ggatgccact ggccccacga aggcctcgac tcacccaccg atttgtatct gcaccagttg
     1561 cccgtcgcgc accagcgaca gcagcaacac gcgcggatgt tgcgcgaaca gcctgcgcaa
     1621 ttgcgcgagg tcgggcgtcg ccacgttgtt gacgccgacc agcacgtcgc cgctggcaag
     1681 cccgttgcgc gccgcacggc tgcccggcgc cacgctggaa acgctgacgc cttcgacgcc
     1741 actgtcaccg gaaggcacgt cgctgaagct cgcgccggcc agtcgcggat cgagcgatgc
     1801 gccgtcggcc tgcgtgcttg ccgccgtcaa cttggcatcg atcgtgaggg acttcccgcc
     1861 gcgatcgaca ccgagcgcga gcgtgctgcc gaccggcgcc aggccttgca cgttgcgcag
     1921 gtcctgcgcg tcggcgatgg gtttgccgtt gacacgggtg acgaggtcgc ccggcttcag
     1981 gcccgccttc gcggccggcg aatcgggcag cacgttggtg atcagcgcgc cgttcgacgc
     2041 cttgatgccg agcgccgcgg ccacgcgcgg actgagatcc tgcgcgtcca cgccgagcgt
     2101 gccgcgttcc accttgccgt gcgcgatcag ctgcttcatc acgtccgcag ccaggtcggt
     2161 cgggatcgcg aaacccagcc ccgcgctcgc gcccgaaggc gaatagatca tcgagttgat
     2221 gccgaccagc tcgccggcga ggttcaccag cgcgccaccg gaattgccgg gattgatcga
     2281 ggca
//
LOCUS       DASSVL010000070         3330 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_439483, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000070 DASSVL010000000
VERSION     DASSVL010000070.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3330)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3330)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3330
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_439483"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..240
                     /locus_tag="VFM52_01165"
     CDS             <1..240
                     /locus_tag="VFM52_01165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008433489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8763808.1"
                     /translation="GADCRRLSYGPPTLRFHTSPSERAVAPFSICGEVGETVSSPNQP
                     PCAIQSVRKVDKARFDTLSAKARRNGSSVELPTRP"
     gene            complement(315..707)
                     /locus_tag="VFM52_01170"
     CDS             complement(315..707)
                     /locus_tag="VFM52_01170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008433487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8763809.1"
                     /translation="MSKRKIGKVLVLSLAVAAAAAMPLAASAHGWGHGGGWHDGGHWA
                     GAPYRGHYHGGYWSGGRWIAGAIVTGAVAGLVSDALAPRTVVYGPPPTTVVYEDAPVI
                     TRRVVTRTIVYDDGYPTRYIRSDDDDGD"
     gene            complement(772..2958)
                     /gene="rlmKL"
                     /locus_tag="VFM52_01175"
     CDS             complement(772..2958)
                     /gene="rlmKL"
                     /locus_tag="VFM52_01175"
                     /EC_number="2.1.1.173"
                     /EC_number="2.1.1.264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008433486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0008990 - rRNA
                     (guanine-N2-)-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0031167 - rRNA methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 23S rRNA
                     (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA
                     (guanine(2445)-N(2))-methyltransferase RlmL"
                     /protein_id="HET8763810.1"
                     /translation="MSQWFASCPKGLEYLLRDELAALGAEDAHEALAGVHFTGPLETA
                     YRACLWSRLASRVLLPLAQFDAATDEALYAGVSAIDWSAHLAAHVTLAVDAHVAQSAL
                     THSQFVAQRVKDAVVDQFRQRSGTRPDVDTDEPDVRLNLYLKRDRATLSLDLGGTPLH
                     RRGWRAQQGEAPLKENLAAAILLRARWPQVYAEGGALLDPMCGSGTLLIEAALMAAGV
                     APGWRREYYGFLGWQRHDVALWRRLLDDAAQRAEAGLKGLRACFFGGDLDPRMVQVAK
                     RNAQDAGVAGFLTLEKRDAMRVEPPAGVTSGLVVTNPPYGERLGERADMPALYQAFGT
                     RLRESFPGWQFAVLAGDAELGRALRLHADKKYALYNGALEVELLLGAIRAADAAPRER
                     KPLSDGAQMLRNRLEKNLKHLHRRLVREDIHCFRAYDQDLPEYAAAIDVYADEGGAPW
                     VHVQEYRAPATVPMAAAQQRLREIVRVAGEVFAAPRERVAVKTRERGKGGSKYGQFDQ
                     RGEFVEVAEGGLRFLVNLTDYLDTGLFLDHRLVRAKLRELARGRRFLNLFAYTGTASV
                     YAAAGGARDTVSVDLSATYLDWASRNLALNDFIGVHHRLVQADALTFLRGDHAHYGLV
                     YVDPPTFSNSKRAGDFDVQRDHVALLAACAERLTDDGVIVFSNNFRRFKLDTEALAGT
                     FAVEDWSAPSIPFDFARHPGIHGCWLLRKKVAEGAPNPWRDARPKS"
     gene            complement(2955..>3330)
                     /locus_tag="VFM52_01180"
     CDS             complement(2955..>3330)
                     /locus_tag="VFM52_01180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007079869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8763811.1"
                     /translation="PSRMSQWFASCPKGLEYLLRDELVALGAEDVHEALAALEIPVAG
                     LFLLATPPAIPGVAQALDVRAGVPAMLVHGWRDEVCPVAPVQAFAAARRLPLLLVDDD
                     HRLGASLDLITAQFVALLGRLA"
BASE COUNT          528 a         1188 c         1136 g          478 t
ORIGIN      
        1 ggcgctgatt gccggcgcct cagctacggc ccgccgacgt tgcgcttcca caccagcccg
       61 tcggagcggg cggtcgcgcc gttcagcatt tgcggcgagg tgggggaaac cgtcagctcg
      121 ccgaaccagc cgccgtgcgc gatccagtcc gtgcgcaagg tcgacaaggc acggttcgac
      181 acgctcagcg cgaaggcccg gcgcaacggc agttcggtgg agctgccgac ccggccgtaa
      241 gccgcggcct ccggactccg gatatgaaaa agcccggcat cagccgggct ttttcacata
      301 gcacgcggca gcaatcaatc gccgtcgtcg tcgtcactgc ggatgtagcg cgtcggatag
      361 ccatcgtcgt acacgatggt gcgcgtcacc acgcgccggg taatgaccgg ggcgtcctca
      421 tagaccacgg tcgtcggcgg tggcccgtac accaccgtac gcggcgccag ggcgtcggag
      481 accaggccag ccacggcgcc ggtcacgatc gcgccggcga tccagcggcc gccgctccag
      541 taaccgccgt ggtagtgccc gcgatacggc gcgccggccc aatggccacc atcgtgccag
      601 ccaccgccat ggccccagcc gtgcgcagaa gcggcgagcg gcatcgccgc cgcagcggcc
      661 acggccaggc tgaggacgag aaccttgccg atcttgcgtt tggacatgat cgcacctccg
      721 tttgaacgtg gttgatgctc ggcttgtgcg acttaatccg cactgaagcc gtcagctttt
      781 gggacgtgcg tcacgccacg gattgggcgc gccttcagcc acctttttgc gcagcagcca
      841 gcagccgtgg atgccgggat ggcgggcgaa gtcgaacggg atgctcggcg cgctccagtc
      901 ctcgaccgcg aaggttccgg caagcgcttc cgtgtccagc ttgaaccgac ggaaattgtt
      961 ggaaaacacg atcacgccgt cgtcggtgag acgctcggcg caggccgcga gcagcgccac
     1021 gtggtcgcgc tgcacgtcga agtcgcccgc gcgcttggag ttggagaatg tcggcgggtc
     1081 gacgtagacc aggccgtaat gcgcgtggtc cccgcgcagg aaggtcagcg catcggcctg
     1141 caccagccgg tgatgcacgc cgatgaaatc gttcagcgcg aggttacgcg aggcccagtc
     1201 caggtacgtc gccgaaagat ccacgctgac cgtgtcgcgc gcgccgccag ccgcggcgta
     1261 cacgctggcg gtgccggtgt acgcaaagag gttcaggaac cgccggccac gcgccagctc
     1321 gcgcagcttc gcgcgcacca ggcggtggtc caggaacagt ccggtatcca ggtaatcggt
     1381 gaggttgacg agaaaccgca gcccgccttc cgccacttcg acgaactcgc cgcgctggtc
     1441 gaactggccg tacttcgacc cgcccttgcc gcgctcgcgg gtcttcaccg cgacgcgctc
     1501 gcgcggcgcc gcgaacacct cgccggcaac gcgcacgatc tcgcgcaggc gctgctgggc
     1561 ggccgccatc ggcaccgtcg ccggcgcccg gtattcctgc acgtgcaccc acggcgcgcc
     1621 gccctcgtcg gcgtagacgt cgatcgcggc ggcgtactcg ggcaggtcct ggtcataggc
     1681 gcggaagcaa tggatgtcct cgcgcacgag acgcctgtgc aggtgcttga gatttttctc
     1741 cagccggttg cgcagcatct gcgcgccatc cgacaacggc ttgcgctcgc gcggcgcggc
     1801 gtcggcggcg cggatcgcgc ccagcagcag ctcaacctcg agcgcgccgt tgtagagcgc
     1861 gtatttcttg tccgcatgca ggcgcaaggc acggcccagt tccgcgtcgc cggccagcac
     1921 cgcgaactgc caaccgggga aactttcgcg caggcgcgtg ccgaaggctt ggtacagcgc
     1981 cggcatgtcc gcgcgttcgc ccaaccgctc gccgtacggc gggttggtca ccaccagccc
     2041 gctggtcacg cccgccggcg gctcgacgcg catcgcatcg cgcttctcca gcgtgaggaa
     2101 accggccacg ccggcatcct gcgcattgcg cttggccacc tgcaccatgc gcgggtcgag
     2161 gtcgccgcca aagaagcacg cacgcaggcc tttcaggccg gcctccgcgc gctgcgccgc
     2221 gtcgtcgagc aggcgccgcc acagcgcgac gtcgtgccgc tgccagccga gaaaaccgta
     2281 gtactcgcgg cgccagccgg gcgcgacgcc ggccgccatc agcgccgcct cgatcaagag
     2341 cgtgcccgag ccgcacatcg gatcgagcag cgcgccgcct tccgcgtaca cctgcggcca
     2401 gcgcgcgcgc agcaggatcg cggcggcgag gttttccttc agcggcgctt cgccctgctg
     2461 cgcgcgccag ccgcggcgat gcagcggcgt gccgccgagg tcgagcgaca gcgtggcgcg
     2521 gtcgcgcttc aggtacaggt tcaggcgcac gtcgggctcg tcggtatcca cgtccgggcg
     2581 cgtgccgctg cgctggcgga actggtcgac gacggcgtcc ttgacgcgct gcgcgacgaa
     2641 ctggctgtgg gtgagcgcgc tttgcgcgac gtgggcatcg acagccagcg tgacatgtgc
     2701 ggcaaggtgc gccgaccagt cgatcgcact gaccccggca tacagcgcct cgtcggtcgc
     2761 cgcgtcgaac tgcgccagcg gcagcagcac gcggctggcg agccgcgacc acaggcacgc
     2821 gcggtacgcg gtttccagcg gacccgtgaa atgcacgccg gctagggcct catgcgcgtc
     2881 ttctgcgcca agcgcggcga gttcgtcgcg cagcaggtat tcgagcccct tcgggcaact
     2941 ggcaaaccat tggctcatgc caggcgaccc agcaaggcga cgaactgcgc ggtgatcagg
     3001 tcgaggctcg cgccgagccg gtggtcgtcg tcgaccagca gcagcggcag gcgacgcgcg
     3061 gccgcaaacg cctgcaccgg cgccaccggg cacacctcgt cgcgccagcc atgcaccagc
     3121 atcgcgggca cgccggcacg cacgtcgagc gcttgcgcca cgccggggat tgcgggcggt
     3181 gtcgccagca ggaacaaacc ggccaccggg atttccagcg cggccagcgc ctcgtgcacg
     3241 tcttccgcgc cgagcgcgac gagttcgtcg cgcagcaggt attcgagccc cttggggcaa
     3301 ctggcaaacc attggctcat gcgagacggc
//
LOCUS       DASSVL010000071         2067 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_524126, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000071 DASSVL010000000
VERSION     DASSVL010000071.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2067)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2067)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2067
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_524126"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(171..785)
                     /locus_tag="VFM52_01185"
     CDS             complement(171..785)
                     /locus_tag="VFM52_01185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015447900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyloxyacyl hydrolase"
                     /protein_id="HET8763812.1"
                     /translation="MRIDADLDKIPSGSVYVTGSLSSQAFIMTFSSRLPRLLAAAALA
                     LLALPAAAADWQLQAGRSYMDNHGANTVFVDATWAPRPLGIGSLTWAPDATAGWIAGR
                     DLAAFRHDRYGTRDDIWLAAAGARFQAGAADDWYRNLYFSFQVALHTGRTQALSSPYE
                     FVSTLGWQWHRFSFGIRHISNAKLHKPNRGETMALVGWRFGDAR"
     gene            complement(908..>2067)
                     /locus_tag="VFM52_01190"
     CDS             complement(908..>2067)
                     /locus_tag="VFM52_01190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007808505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="pitrilysin family protein"
                     /protein_id="HET8763813.1"
                     /translation="IAAAAEALGGSLEAAAGWDESAVGITVTTPKLAAALQLLASVVR
                     QPDFAPDELKRAQAQAEDDVRLALSQPVALASLAAGRGVFGDGAYGHSRTGTPASIAR
                     ITRADVVRLHAQLYRPDNAILVLAGDIAPAQALSLAQAGFGNWPKPATPLPAKPASHT
                     AGALPALVLIDQHGAGQAGVVAAHVAPPRNDRSYYAGVVANAVLGGSYSARLNEEIRI
                     KRGLSYGASSRLQPLADTGLWLAAAQTKNPSAPEVVALMRRQFAALGDQPVAPAELAA
                     RKATLIGSYGRSLETTAGLAQQVGDLAVYRLPLTDVGSYASRVAAVTPKEVARYAHQW
                     LDARHLHMVVVGDATQFAPALQKTDAKALLLDAAKLDLDTASLRPAPAVKR"
BASE COUNT          310 a          724 c          741 g          292 t
ORIGIN      
        1 ccaccaagca cccgtcgcga taaagcaacg cgcgctgtcg gcgctccgtg cacgcctgca
       61 aggcccgcca ccgtcgctgg cggcggtcga tcagatgatc cttgggcttg cttgcccaac
      121 cggcaacacg agcccgccga accggtcaac gccctcgccg actgtttcac ctaccgcgca
      181 tcgccaaaac gccaccccac cagcgccatc gtctcgccgc ggttgggctt gtgcagcttc
      241 gcattggaga tgtgccggat accgaaactg aaacggtgcc actgccagcc gagcgtgctg
      301 acgaattcgt aggggctgct cagggcctgg gtgcggccgg tgtgcagggc gacctggaag
      361 ctgaaataca ggttgcggta ccagtcatcc gcagcgcccg cctggaaccg tgcgccggcg
      421 gcggcgagcc agatgtcgtc gcgggtgcca tagcggtcgt ggcggaaggc ggcgagatcg
      481 cgcccggcga tccagccggc ggtggcgtcc ggcgcccagg tgagcgagcc gatgccgagc
      541 ggacgcggtg cccacgtggc gtcgacaaat acggtgttcg cgccgtgatt gtccatgtag
      601 ctgcgccccg cttggagttg ccagtcggcg gcggccgccg gcaacgcgag caacgccagc
      661 gctgctgccg ccagcaggcg gggcaatcgg gaagaaaaag tcatgatgaa tgcctgtgag
      721 gacagggaac ctgtcacata aactgaaccg gacggtattt tatccaagtc ggcatcgatc
      781 cgcacgtccg gtcgccccca gagcggcccg gtgcaagggt caacatagcc cggtaccccg
      841 tgcaggccgc atgaaaaacc ccggcgggtg aggccggggt cggaaccgca tgccgccggc
      901 gtgccggtca gcgtttcacg gcgggcgcgg ggcgcaggct ggcggtgtcc aggtcgagct
      961 tggcggcatc cagcagcaag gctttcgcat cggttttctg cagggccggc gcgaattgcg
     1021 tggcatcgcc gaccaccacc atgtgcaggt gcctggcatc gagccactgg tgtgcgtagc
     1081 gcgccacctc cttcggcgtc accgcggcga cccggctggc gtagctgccg acgtcggtca
     1141 gcggcaagcg gtacacggcg aggtcgccga cctgctgggc gagcccggcc gtggtttcca
     1201 ggctgcggcc gtagctgccg atcagcgtcg ccttgcgcgc cgccagctcg gccggcgcca
     1261 ccggctggtc gcccagcgcc gcgaactgcc ggcgcatcag cgccaccacc tcgggcgcgg
     1321 aggggttctt ggtctgcgcc gcagccagcc acaggccggt gtcggccagc ggctgcagcc
     1381 ggctcgacgc gccgtaggaa agcccgcgct tgatgcggat ctcctcgttg agccgcgccg
     1441 agtacgaacc gccgagcacg gcgttcgcga ccacgccggc gtagtagctg cgatcgttgc
     1501 gcggcggcgc gacgtgcgcg gcgaccacgc cagcctggcc ggcgccgtgc tggtcgatca
     1561 gcaccagcgc cggcagcgcg ccggcggtat ggctcgcggg cttggccggc aacggcgtcg
     1621 ccggcttcgg ccagttgccg aacccagcct gcgcgagact caacgcctgc gccggcgcga
     1681 tatcgccggc cagcaccagg atggcgttgt cggggcggta cagctgcgcg tgcaggcgca
     1741 ccacgtcggc gcgggtaatg cgcgcgatcg acgccggcgt gccggtgcgc gaatgaccgt
     1801 aggcgccgtc gccgaacacg ccgcgtccgg cggcgagcga ggccagcgcc accggctggc
     1861 tgagcgcgag acgcacgtcg tcctcggcct gtgcctgcgc gcgcttgagc tcgtccggcg
     1921 cgaaatccgg ctggcgcacc acgctggcaa gcagttgcag ggccgccgcc agcttgggcg
     1981 tggtgacggt gatgccgacc gcactctcgt cccagccggc cgcggcttcg agcgagccgc
     2041 cgagcgcctc ggccgccgcg gcgatct
//
LOCUS       DASSVL010000072         2394 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_284170, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000072 DASSVL010000000
VERSION     DASSVL010000072.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2394)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2394)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2394
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_284170"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            34..360
                     /locus_tag="VFM52_01195"
     CDS             34..360
                     /locus_tag="VFM52_01195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8763814.1"
                     /translation="MTQSSNNPNLGPVRAHLASVRAGGGSTRFVGSPSFHGWLFLALV
                     WFALASLGTVLFPSPLVELAMAAAWLVAAAVTWQVQRRHWLALRREYLAMTPRGGEPV
                     ADASNA"
     gene            451..527
                     /locus_tag="VFM52_01200"
     tRNA            451..527
                     /locus_tag="VFM52_01200"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:485..487,aa:Met,seq:cat)
     gene            730..1269
                     /gene="rimP"
                     /locus_tag="VFM52_01205"
     CDS             730..1269
                     /gene="rimP"
                     /locus_tag="VFM52_01205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008217033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000028 - ribosomal small subunit assembly
                     [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA];
                     GO_process: GO:0042274 - ribosomal small subunit
                     biogenesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimP"
                     /protein_id="HET8763815.1"
                     /translation="MDTHALAQRFDPILADLGLYCLGVEFAAGQHQGTLRVYLDVLDE
                     AVAADGTRREVGIEDCEAASRELSALLDVEDPIPGHYVLEVSSPGLDRPLFTAAQFAR
                     VVGQEVKLSLRVPLDGRRRLRGKLVAVDGEQLSLDVDGQAFNVAHADVEGARVVPDWV
                     ALGYAPKPRPGKPAHKKKA"
     gene            1383..>2394
                     /gene="nusA"
                     /locus_tag="VFM52_01210"
     CDS             1383..>2394
                     /gene="nusA"
                     /locus_tag="VFM52_01210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006353 - DNA-templated transcription
                     termination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination factor NusA"
                     /protein_id="HET8763816.1"
                     /translation="MSKELLLVVDAVANEKGVPRDVIFEAMEAALASAAKKRYPDEEP
                     DIRVAIDHDTGDYETFRRWEVIADDGEMESPYFQLRLMDAVDERANAQVGEYIEHQIE
                     NAEFGRIAAQAAKQVIVQRVREAERQQVVDAYKDRVGELITGIVKRVERGNIYLDLGG
                     NAEAFIPRDKTIPRESVRVGDRLRGYLYEVKSEVRGPQLFVSRAAPEFMIELFKLEVP
                     EVGQGLVEIKGCARDPGDRAKIAVLAHDSRTDPIGACIGMRGSRVQAVSNDLNGERVD
                     IILWHENQAQFVINAMAPAEVQSIIMDEDKHSMDIAVAEDKLSQAIGRGGQNVRLASK
                     LTG"
BASE COUNT          394 a          733 c          866 g          401 t
ORIGIN      
        1 gatagatctt tcgacgagag gccgcccggg atcatgacgc agtccagcaa caatccgaac
       61 ctcggccccg tccgcgcgca cctggccagt gtccgcgccg gcggcggctc gacgcgattc
      121 gtcgggtccc ccagcttcca cgggtggctg ttcctggcac tggtgtggtt tgccctggca
      181 tcgctcggca ccgtgttgtt tccctcgccc ctggtcgaac tggcgatggc cgcggcgtgg
      241 ctggtggcgg cagcggtgac ctggcaggta cagcggcggc attggctggc gttgcgccgc
      301 gagtatctgg cgatgacgcc acgcggaggc gagccggtgg cggatgcgtc gaatgcctga
      361 tcgcgggtcg gcgacgcgcg tcccccaccg gaatctgcgt gccgatcgtt gcgcgtattg
      421 cgacgggtct gtatactccg tggactctga tgcggggtgg agcagtctgg cagctcgtcg
      481 ggctcataac ccgaaggtcg caggttcgaa tcctgccccc gctaccagat ctttctgaac
      541 aagaaagcct cttcgtgagg cttttttgtt ggatgcagtg aatgcatcgg gttctgccgg
      601 ccaagctcgt ggcgcggcgg aacatgcgga aagccgccgg tggtcgggac attgtcgatg
      661 acgctccggc acggggcagg gaatgggccg ttggtgccca ttttttgttt ttgcgacctg
      721 gaagccttga tggatacgca cgcgctcgca caacgcttcg acccgatcct tgccgatctc
      781 ggcctgtatt gcctgggcgt ggaattcgcg gcggggcagc accagggcac gctgcgcgtg
      841 tatctcgacg tgctcgacga ggcggttgcc gccgacggca cgcggcgcga ggtcggcatc
      901 gaggattgcg aggcggccag ccgcgagctg tcggcgctgc tggatgtcga ggatccgatc
      961 ccggggcatt acgtgctgga ggtgtcgtcg ccggggctcg accgcccgct gttcaccgca
     1021 gcgcagtttg cgcgcgtggt ggggcaggag gtgaagctgt cgctgcgcgt gccgctggat
     1081 ggccggcgcc ggctgcgcgg caagctggtg gcggtggacg gcgagcagtt gtcgctcgac
     1141 gtcgatgggc aggcgttcaa cgttgcccat gccgatgtgg aaggtgcccg cgtggtgccg
     1201 gactgggtgg cgctggggta cgcgccgaag cccaggccag gcaagccggc gcacaagaag
     1261 aaggcctgat tgaacccgat caaccgtgcg atcatggatg gatcgctgcc ggaaccccgc
     1321 acgcagggat ggctgcaaga atcgacagtc ggacgccgga cggcgccctt ggagttgctg
     1381 caatgagcaa agagcttttg ctggtggtcg acgcggttgc caacgagaag ggcgtgccgc
     1441 gcgacgtgat cttcgaggcg atggaggccg cgctggcgtc cgccgcgaag aagcgctatc
     1501 cggacgagga gccggatatc cgcgtcgcca tcgaccacga caccggtgat tacgaaacct
     1561 tccgccgctg ggaagtgatt gccgacgacg gcgagatgga gtcgccgtac ttccagctgc
     1621 gcctgatgga cgcggtcgac gagcgcgcga acgcgcaggt cggcgagtac atcgagcacc
     1681 agatcgaaaa cgccgagttc ggacgcatcg ccgcgcaggc cgccaagcag gtgatcgtgc
     1741 agcgcgtgcg ggaggccgag cgccagcagg tggtggatgc gtacaaggat cgtgtcggcg
     1801 agctgatcac cggcatcgtc aagcgcgtcg agcgcggcaa catctacctg gatctcggcg
     1861 gcaacgccga ggccttcatc ccgcgcgaca agacgatacc gcgcgagtcg gtgcgcgtcg
     1921 gcgaccgcct gcgcgggtat ctgtacgagg tgaagtccga agtgcgcggg ccgcagctgt
     1981 tcgtctcgcg cgccgcgccg gaattcatga tcgagctgtt caagctcgag gtgcccgaag
     2041 tcggccaggg cctggtcgag atcaagggct gcgcgcgcga cccgggcgac cgcgccaaga
     2101 tcgcggtgct ggcgcacgac agccgcaccg acccgatcgg cgcctgcatc ggcatgcgcg
     2161 gttcgcgcgt gcaggcggtg tccaacgacc tcaacggcga gcgcgtggac atcatcctgt
     2221 ggcacgagaa ccaggcgcag ttcgtcatca acgcgatggc gccggccgag gtgcagtcca
     2281 tcatcatgga cgaggacaag cactcgatgg acatcgcggt ggccgaggac aagctgtccc
     2341 aggcgatcgg ccgtggcggc cagaacgtgc gcctcgccag caagctcacc ggct
//
LOCUS       DASSVL010000073         2071 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_693851, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000073 DASSVL010000000
VERSION     DASSVL010000073.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2071)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2071)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2071
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_693851"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..105
                     /locus_tag="VFM52_01215"
     CDS             <1..105
                     /locus_tag="VFM52_01215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019300425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8763817.1"
                     /translation="KLLEKQKEGKKRMKQVGRVEIPQEAFLAVLKVDK"
     gene            209..1123
                     /gene="lepB"
                     /locus_tag="VFM52_01220"
     CDS             209..1123
                     /gene="lepB"
                     /locus_tag="VFM52_01220"
                     /EC_number="3.4.21.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015448000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006465 - signal peptide processing
                     [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase I"
                     /protein_id="HET8763818.1"
                     /translation="MDFDFSAALLGLTVLFGVVWGLDRLFWYKRRKARFEAAGDEYRD
                     PVPVDWARSLFPVVLVVLVLRSFVAEPFRIPSGSMMPTLDVGDFILVNKFAYGLRMPA
                     FNDKFVSLGEPKRGDVVVFRFPGFLCRDADGKLVRSGDISCADPHAPVPSQNWIKRVI
                     GLPGDTIQIHGSDLLVNGKPVAADEIGPYVGNPLRSEERLMLDMGATVWNEHLQREDG
                     QTVNHLIARMPAYTTPYSIPSANVPSKVPPGCYIVMGDNRNNSTDSRWWGCLPEQDLA
                     GKAFMIWMSWKGWGTGGVDFHRIGSLIH"
     gene            1213..1596
                     /locus_tag="VFM52_01225"
     CDS             1213..1596
                     /locus_tag="VFM52_01225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007511284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4845 domain-containing protein"
                     /protein_id="HET8763819.1"
                     /translation="MNTRQSGVTLIGMLILILVAGFFAYMGMKLVPAYTEYMGVVKAM
                     NNVASSGTSGRSLDEIRRDLLRRMDFQYVDDATVKPTDITIDRSSGGASTLKVSYSKD
                     IPFLYNIDFLVSFEKSVPLQGNVAQ"
     gene            1607..>2071
                     /gene="rnc"
                     /locus_tag="VFM52_01230"
     CDS             1607..>2071
                     /gene="rnc"
                     /locus_tag="VFM52_01230"
                     /EC_number="3.1.26.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007511285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004525 - ribonuclease III activity
                     [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease III"
                     /protein_id="HET8763820.1"
                     /translation="MSFPYRFRDAGLATLALTHRSVGKPNNERLEFLGDALLGAFVAA
                     MLYVAHPKASEGELSRLRAQLVNGDALAVIARELELGDGLKLGPGELKSGGFRRDSIL
                     ADAFEATLAAVFLDGGLEACRDVVRQLFADRIAALHRSSKDAKTRLQEWLQGK"
BASE COUNT          363 a          633 c          712 g          363 t
ORIGIN      
        1 aaactgctgg agaaacagaa ggaaggcaag aagcgcatga agcaggtggg ccgcgtggaa
       61 attccgcagg aggccttcct ggccgtgttg aaggtggaca aataaaccgg agtagggcgt
      121 caggtggtgg ggaacgggaa agccgccgct cggcgccctt tcggtttccc actcccgatg
      181 cccgattcct gttcgaaagg agccaagcat ggacttcgat ttttcggccg cccttctggg
      241 cctcaccgtg ctgttcggcg tggtgtgggg cctggatcgg ctgttctggt acaagcgccg
      301 caaggcgcgg ttcgaggcgg caggcgacga atatcgcgac ccggtgccgg tggactgggc
      361 acgctcgctg tttccggtgg tgctggtggt gctggtgctg cgttcgttcg tggccgagcc
      421 gttccgcatc ccatccggat cgatgatgcc gacgctcgac gtcggcgatt tcatcctggt
      481 caacaaattt gcctacgggc tgcgcatgcc ggcgttcaac gacaagttcg tgtcgctggg
      541 cgagcccaag cgcggcgacg tggtggtatt ccggtttccc ggcttcctgt gccgcgacgc
      601 cgacggcaag ctggtgcgca gcggcgacat cagctgcgcc gatccacacg cgccggtgcc
      661 cagccagaac tggatcaagc gcgtgatcgg cctaccgggc gacaccatcc agatccacgg
      721 cagcgatctc ctcgtcaacg gcaagccggt tgccgcggat gagatcgggc catacgtcgg
      781 caaccccctg cgcagcgaag agcgcctgat gctggacatg ggtgccacgg tgtggaacga
      841 gcacctgcag cgcgaagacg ggcagaccgt caaccacctg attgcgcgca tgccggcgta
      901 caccacgccg tattcgatcc ccagcgcgaa cgtgccgtcg aaggtgccgc cgggctgcta
      961 catcgtgatg ggcgacaacc gcaacaacag caccgacagc cgctggtggg gctgcctgcc
     1021 ggagcaggat ctcgcgggca aggcgttcat gatctggatg agctggaagg gctggggcac
     1081 cggcggcgtc gacttccacc gcatcggcag cctcattcat tgatcgccgg cgcggttgca
     1141 ggcggggtgg cgctggcata atcggcgccc atcggcggcc gtcggccggc attgacgcaa
     1201 agcgagggga cgatgaacac cagacagtcg ggcgtgaccc tgatcgggat gctgatcctt
     1261 atcctggtgg cgggcttttt tgcgtacatg ggcatgaaac tggtgccggc ctacaccgaa
     1321 tacatgggcg tggtgaaggc gatgaacaac gtcgccagct cgggcacctc cggccgttcg
     1381 ctcgacgaga tccgccgcga cctgctgcgc cggatggatt tccagtatgt cgacgacgcg
     1441 acggtgaagc ccaccgacat caccatcgac cgcagcagcg gcggggcgag cacgctcaag
     1501 gtgagctatt cgaaggacat tccgttcctg tacaacatcg actttctcgt gagcttcgag
     1561 aagagcgtgc cgctgcaggg caacgtggca cagtgagtcg acgatcttga gctttccgta
     1621 ccgtttccgt gatgccgggc tggccacgct ggcgttgacc caccgcagcg tcggcaagcc
     1681 gaacaacgag cgcctggagt ttctcggcga cgcgctgctc ggcgcctttg tcgcagcgat
     1741 gctgtatgtg gcacacccga aggccagcga gggtgaactg tcgcggctgc gcgcgcagct
     1801 cgtcaacggc gatgcgctgg cggtgatcgc gcgcgagctg gagctgggcg acgggctgaa
     1861 gctcgggccc ggcgaactca agagcggcgg tttccgccgc gattccatcc ttgccgacgc
     1921 cttcgaggcg acgcttgcgg cggtgttcct agacggcggg ctggaggcct gccgcgacgt
     1981 ggtgcgccag ctgttcgcgg accgcattgc tgccttgcac cgctcgtcca aggatgccaa
     2041 gacgcggctg caggaatggc tgcagggcaa g
//
LOCUS       DASSVL010000074         4124 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_156947, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000074 DASSVL010000000
VERSION     DASSVL010000074.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 4124)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4124)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4124
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_156947"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..570)
                     /locus_tag="VFM52_01235"
     CDS             complement(<1..570)
                     /locus_tag="VFM52_01235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007510339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HET8763821.1"
                     /translation="MVYVLLAAVCSVLVSVLLKLAKRHGVDVAQAVAWNYVVAAGLAA
                     WLLAPSLAPLATPAAPWPALVALAILLPTIFVALGASVRHAGIVRSDAAQRLSLLLSL
                     LAAFALFGERLDGWKLAGCVLGLAALVGMVWRHGPASGDGRGPWTWPLVVFMGFGTID
                     VLFKRVAAAGIPLGSALVAMFTLALPVAFA"
     gene            685..1557
                     /locus_tag="VFM52_01240"
     CDS             685..1557
                     /locus_tag="VFM52_01240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8763822.1"
                     /translation="MHVEQRAAARAEPTPPSRVSSTVRQTQGGKVVNPAGEPRKHRQG
                     SDGIRASAPRRHRHRTEATPSIPRIGALAAALLLHAGLLLSLLAPDADQPTRVSRAPV
                     ATVGALQVRLLVPPAVATPHLRRPPPAATRPMHATRAITPAAPSPPTASAALPAQAAP
                     SARLQVSVPAPAATAPASDYVPGSGRFAAPAYGSSNVRVPGHNGPVRGAPTIAMVDPR
                     TQGVAGIVRFIGGLAGAVDSHCVDVGAWRGMTARERIAHHVTPDAIEATASRYGCAPP
                     PALPGSPVYWRDRR"
     gene            1905..3518
                     /locus_tag="VFM52_01245"
     CDS             1905..3518
                     /locus_tag="VFM52_01245"
                     /inference="COORDINATES: protein motif:HMM:NF015803.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0046930 - pore complex [Evidence IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_process: GO:0006811 - monoatomic ion transport
                     [Evidence IEA];
                     GO_process: GO:0015031 - protein transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ShlB/FhaC/HecB family hemolysin
                     secretion/activation protein"
                     /protein_id="HET8763823.1"
                     /translation="MQAQTTTAQQEQRERAQRQAQQREAQRLAPDVRLSVAAPFDHRA
                     TTVPVETPCFRVDDVQLEGAHRESFGFVQKYLNVYRGRCLGQQGLRLLVRRASDLLLA
                     HGYVTSRLVVPEQDLASGRLHVALLAGTVATVRLAPGSAEVDWRGALPLRPGDVLNLR
                     AIEQGLEQLRRVPSQEARIDIAPGTRPGTSDLVLTVTRSKRWRIIANLDDSGADSTGK
                     EQGGLTLAVDQPLGINDLLSIGYTHSAGDFKPTKGTHGSNFNYSVPWGNWTFGLSSSH
                     YAYRQSVFGSMQTFAYTGTSGTTAASATRLLHRDAHSRTSLAITVAARREHSYIDGVQ
                     IQTQRRQVTSAELALIQRRYLGRSQLDLRLAYRWGVPWLGGAWQPGVAGGPTNRYGFA
                     TLDASLSTPFQMASTPWVWLSELHGQATGDHLYAEDDLTIGGRYTVRGYDGNTVLAGR
                     RGYYWRNTLNLPVGGTGVLLYGGVDVGHVGGDVTNGYADHSLSGTVVGIRGTRWGLSW
                     NLFAGWPLQTPRRFPERRPAAGMQWIYMY"
     gene            3549..>4124
                     /locus_tag="VFM52_01250"
     CDS             3549..>4124
                     /locus_tag="VFM52_01250"
                     /inference="COORDINATES: protein motif:HMM:NF017658.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="filamentous hemagglutinin N-terminal
                     domain-containing protein"
                     /protein_id="HET8763824.1"
                     /translation="MRHPAGFIKETAMGNAALRKATNGRSATVRWHRSLRRHALWAAM
                     ALALGVPTGQAQTVVTDGGTRTGVVAAPNGVPVVDIAAPNGKGLSHNTYQQFNVGSNG
                     LILNNSGAVSNTQLAGYIGGNPNLGAGQAASLILNEVTSTAPSQLNGAMEVAGHAAQV
                     VVANPNGITCSGCGFINAPRGTLTTGRPLFAG"
BASE COUNT          658 a         1497 c         1404 g          565 t
ORIGIN      
        1 cgcaaaggcc accggcaagg ccagggtgaa catcgccacc agcgcgctgc cgagtgggat
       61 gccggccgcc gccacgcgct tgaacagcac gtcgatcgtc ccaaagccca tgaacacgac
      121 gagcggccac gtccacggtc cgcgcccgtc gccgcttgcg ggcccgtggc gccataccat
      181 gccgaccagc gcggcgaggc ccagcacgca gccggccagc ttccagccat ccagccgttc
      241 gccgaacaac gcgaacgccg ccagcaacga cagcaacagc gacagccgct gcgccgcgtc
      301 cgaacgcacg atgccggcat gccgcaccga ggcgccgagc gcgacgaaga tcgtcggcag
      361 caggatcgcg agcgccacca gggccggcca cggtgcggcc ggcgtggcga gcggcgccag
      421 cgatggcgcg agcagccacg cggcaagccc ggccgcgacc acgtagttcc acgccaccgc
      481 ctgcgccacg tccacgccgt ggcgcttcgc cagcttgagc agcaccgaca ccagcacgct
      541 gcacaccgcg gccagcagca cgtagaccat tgcgacaccc gcgtgggaag ggcccgcgag
      601 cgtacaccac aggcgggctt tcgcggttga cgaggtgggc ggcggctggc ctcccggcgg
      661 cctgccttga gatgcccgtc gtcgatgcat gtcgagcagc gggctgccgc ccgagcggaa
      721 ccaaccccgc catcccgggt cagctccacc gttcggcaaa cgcaaggagg caaggtggta
      781 aaccctgcag gcgagccacg gaagcatcgg cagggaagcg atgggattcg ggccagcgcg
      841 ccacggcggc accgacaccg cacggaggcg acgccgtcca tcccgcgcat cggcgcattg
      901 gccgccgcgt tgctgctgca cgccgggctg ctgctgagcc tgctggcacc ggatgccgat
      961 cagccgaccc gcgtttcccg cgcacctgtg gctaccgtcg gcgcgttgca ggttcgattg
     1021 ctggtgccgc cggccgtcgc gacaccgcac ctgcgccggc cgcctccagc ggcgactcgt
     1081 cccatgcacg ccacgcgcgc catcactccc gccgcgccat cgccacccac agcatcggcg
     1141 gcgcttcctg cgcaggcagc gccgtcggcg cgcctgcagg tttccgtgcc ggcgccggct
     1201 gccaccgcgc ctgcgtcgga ctacgtgccc ggcagcggcc gcttcgccgc tccggcctat
     1261 ggttcctcga acgtgcgcgt gcccggccac aatggcccgg tgcgtggcgc gccgaccatc
     1321 gcgatggtcg atccgcgcac gcagggcgtg gccggtatcg tgcggttcat cggcggcctg
     1381 gccggcgccg tcgactcgca ttgcgtggat gtcggcgcct ggcgcggcat gaccgcccgc
     1441 gaacgcatcg cccaccacgt caccccggat gccatcgagg ccaccgccag ccgctacggc
     1501 tgtgcacccc cgcctgcgct gccgggcagc ccggtgtatt ggcgcgatcg gcgttgagcg
     1561 tattgccaga ggcggcgggc ggttcgccgc cgaatcccgg tggcaggatt ccgcccccgc
     1621 gagcaggtcg gcttttgcgg acgccgtgag cgcctgcgcc tgcacgcgtc gacgtggagg
     1681 cccgcgaccg agcgtgatcc tcgtctcatg cagcttcgaa ggccttcgct atcatcgaaa
     1741 ccgtccgcgc tgagggtgct agggaagcaa aggcttcaac agccggcaag ggtcacagga
     1801 ccgtgatagg gggcgacggc atgcgaggtg gcaagccacg gcggcgatgc catgcaggcg
     1861 gcatatgggc gctggcgctg gcggctggcg ccgcttcaat cggtgtgcag gcgcagacga
     1921 cgacggccca acaggagcag cgcgagcgcg cccagcgtca ggcgcagcag cgcgaggcgc
     1981 agcggctggc gccggacgtg cggctgtcgg tcgccgcgcc attcgaccat cgcgcgacca
     2041 cggtaccggt ggagacgccc tgcttccgcg tcgacgacgt gcaactggaa ggcgcgcacc
     2101 gcgaaagttt cggcttcgtg cagaagtatc tcaacgtcta ccgcgggcgc tgcctgggcc
     2161 agcagggctt gcgcctgctg gtccgtcgcg cgtcggactt gctgctggcg cacggctacg
     2221 tcaccagccg gctggtggtg ccggaacaag acctcgccag cggtcgcctg cacgtggcgc
     2281 tgctggccgg cacggtggcg acggtgcgct tagcgccggg ttcggccgag gtggactggc
     2341 gtggtgcgct gccgctccgc ccgggcgacg tgctgaacct acgtgcgatc gagcaggggc
     2401 tggagcagct ccggcgcgtt ccgtcgcagg aagcgcggat tgacatcgcc cccggcaccc
     2461 ggccgggcac atccgatctc gtgctcaccg tcacgcgcag caagcgctgg cgcatcatcg
     2521 ccaatctcga cgacagcggc gccgacagca ccggcaagga gcagggcggc ctcaccctcg
     2581 ccgtggacca gccgctgggt atcaacgacc tgctgagtat cggctacacg cacagtgccg
     2641 gtgacttcaa acccaccaaa ggcacgcacg gcagcaactt caactacagc gtgccgtggg
     2701 gcaactggac gttcggtctg tcgtcgtcgc actacgccta tcgccagtcg gtgttcggct
     2761 cgatgcagac ctttgcctac acaggcacgt cgggtaccac ggcggcgagc gccacgcgcc
     2821 tgctgcaccg cgacgcgcac agccgcacct cgctggcgat aaccgtcgca gcgcgccgtg
     2881 agcacagcta tatcgacggc gtgcagatcc agacccagcg gcggcaggtg acttcggcgg
     2941 aactggcctt gatccagcgc cgctacctgg gacgctcgca gctcgacctg cgcctggcct
     3001 atcgctgggg cgtgccatgg ctcggtggcg cgtggcaacc gggtgtcgcg ggcggcccca
     3061 ccaaccgcta cggcttcgcc acgctcgacg ccagcctgag tacgccgttc cagatggctt
     3121 ccacaccttg ggtgtggctg tccgagctgc acgggcaggc taccggcgat cacctgtatg
     3181 cggaggacga cctcaccatc ggcggccgct acacggtgcg cggttacgac ggcaacacgg
     3241 tgctcgccgg ccgccgcggc tactactggc gcaacacgct caacctgccg gtgggcggca
     3301 cgggtgtcct gctgtacggc ggcgtggacg tgggccatgt cggcggcgac gtcaccaacg
     3361 gttacgccga ccacagcctg agcggcacgg tggtcggcat acgcggcaca cgctggggct
     3421 tgagttggaa cctgtttgcc ggctggccat tgcagacacc gcgccgcttt ccggaacgcc
     3481 gccccgccgc cggcatgcaa tggatttaca tgtactgacg cacggaacga aggcaaggag
     3541 gcgctgcggt gcgccatccg gccggattca tcaaggagac cgccatgggg aacgccgctt
     3601 tgcgcaaggc cacgaatgga cggagtgcca cggtgcgctg gcatcgttcc ctgcgtcggc
     3661 atgcactatg ggccgccatg gccctggcgc tgggggtgcc gacgggccag gcgcagacgg
     3721 tcgtcaccga tggcggcacg cgtactggcg tggtcgccgc acccaatggc gtgccggtcg
     3781 tcgatatcgc tgcccccaac ggcaagggct tgtcgcacaa cacctaccag cagttcaacg
     3841 tcggcagcaa cgggctgatc ctcaacaaca gcggcgccgt cagcaacacc cagctggccg
     3901 gctacatcgg cggcaatccc aaccttggcg ccggccaggc cgcctcgctg atcctcaacg
     3961 aagtgacttc caccgcgccg agccagctca acggcgcaat ggaagtggca ggccacgccg
     4021 cccaggtggt ggtggccaac cccaacggca tcacctgcag cggctgcggc ttcatcaatg
     4081 cgccgcgcgg cacgctgacc accggccggc cgctgtttgc tggc
//
LOCUS       DASSVL010000075         3105 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_736149, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000075 DASSVL010000000
VERSION     DASSVL010000075.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3105)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3105)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3105
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_736149"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..765)
                     /locus_tag="VFM52_01255"
     CDS             complement(<1..765)
                     /locus_tag="VFM52_01255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="GGDEF-domain containing protein"
                     /protein_id="HET8763825.1"
                     /translation="MLSDAGSTVPGYFIAALIATSGIALASSAQFAVIGWWRRGERVF
                     LAYAALCLCIGALVIGDVGLRSAAGLTQAVASMRWSVGAALASFVPLVWFVQTYTGGA
                     MPRRVMLVLVVVVAGFSWLNWVSPGTLFFSAISPMPAIVLPWGERLYRFGGALSVWGG
                     LFHLASYAAFGWALWRTWRQHRRGEVVRAWLLAGCLLVQFAALLWGDVVVDTLHVDVP
                     YLDGFAFLPFVLLMSVSLAAQLRQRSTELAHARRALE"
     gene            1010..2875
                     /locus_tag="VFM52_01260"
     CDS             1010..2875
                     /locus_tag="VFM52_01260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007804176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M1 family metallopeptidase"
                     /protein_id="HET8763826.1"
                     /translation="MRLLSLLALGAVVLPVAARAGDPNSYAQPDQVVVTHLDLDLAID
                     FPHQRLDGVATLKLDWKNPKASALVLDTRDLAISAVDAVAANGKTQALKYALAPADKT
                     LGAKLTIDAPAHPASVRITYRTAPDASGLQWLPPEQTADKKAPFMFSQSESIHARSWV
                     PLQDSPAIRFTYAAHVTAPKNIRVVMSAPNEAHHPLDGDFRFVQPHPIPSYLLAIAAG
                     DLAVAETGPRSAVYAEPSMVAKAAREFGDTETIIETAEKLYGPYPWGRYDILVLPPSF
                     PYGGMENPNMTFATPTIIVGDKSLVSVISHELAHSWSGNLVTSASWRDIWLNEGFTTY
                     VQGRITEAVYGKRQADEETLLSARALEKKIGTLTENQQKLAPDPKGLGGDDALSDVAY
                     DKGSWFLRTLETKFGRPVFDAYLKGYFQHFAWHSITTEEMLAYLKPNLFDKYPGKLGW
                     AEVQDWVYGTGIPKNAALPGSPRFDAIDKERTAFLAGKLPADKLDAKDWNTQEWMYFL
                     DRLPDAPTLAQAQALDAAWHLTGTPNAEIGMRWYIHAIAAGDQAVWPAAAEHMTRIGR
                     LYLTMPLYRAFVKTPAGFAYAESVYAKAKVGYHPLTRHAVETLFAKARAKQPAAK"
BASE COUNT          574 a         1183 c          952 g          396 t
ORIGIN      
        1 ttccagcgcc cgccgcgcgt gcgccagctc ggtcgagcgc tggcgcagtt gcgcggccag
       61 cgacacgctc atcagcagta cgaacggcag gaacgcgaaa ccatccaggt acggcacgtc
      121 gacgtgcagc gtgtcgacca cgacatcgcc ccacaacaac gccgcaaact gcaccagcag
      181 gcagccggcc agcagccacg cccgcaccac ttcgccacgc cggtgctggc gccaggtgcg
      241 ccacagcgcc cacccgaatg cggcatagct ggcgaggtgg aacagcccgc cccagaccga
      301 cagcgcgccc ccgaaacggt acaggcgctc gccccacggc agcacgatcg ccggcatcgg
      361 ggaaatcgcc gaaaagaaca aggtgcccgg cgagacccag ttgagccacg agaacccggc
      421 caccaccacg accagcacca gcatcacccg gcgtggcatc gccccaccgg tgtaggtctg
      481 cacgaaccac accagcggca cgaaggacgc cagcgccgcg cccacgctcc agcgcatgga
      541 ggcgaccgcc tgcgtgagcc cggcggcgct gcgcaacccg acgtcgccga tcaccaacgc
      601 gccgatgcac aggcacagcg cggcataggc gagaaacacg cgctcgccgc gccgccacca
      661 gccgatcacg gcgaattgcg cggacgaggc cagcgcgatg ccgctggtgg cgatcagcgc
      721 cgcaatgaaa taaccgggca ccgttgaacc cgcgtcggac agcatgtccc ctccggtcgc
      781 cgacctggcc tgcgccacct taaacgactg gcatcccgcc cgccagaacc gccgccgccc
      841 gccatggcct tgcaggcggc gaaaccaaac cggggccgac ggatgggccg gtgccgggtg
      901 gagaccgccc cgcgcaaacg gacgggcacc atgccggaag cgtccgccac gcggggatgc
      961 cgaccggcgg tggcatactg ccgctcttgc ccatcgcccg gagcgccgca tgcgcctgct
     1021 ttccctcctc gccctcggtg ccgtcgtgct gccggtcgcc gcccgtgccg gcgaccccaa
     1081 ctcgtacgcc cagcccgacc aggtcgtcgt cacccatctg gatcttgatc tggcgatcga
     1141 cttcccgcac cagcggctgg atggcgtcgc cacgctcaag ctggactgga agaacccgaa
     1201 ggcttccgcg ctggtactgg atacccgcga cctggcgatc tccgccgtcg acgccgtggc
     1261 cgccaacggc aagacccagg cactgaaata cgcgctggcg ccggccgaca agaccctcgg
     1321 cgcgaagctc acgatcgacg ccccggccca cccggccagc gtgcgcatca cctaccgcac
     1381 cgcaccggat gcttccggcc tgcaatggct gccgccggag cagaccgccg acaagaaggc
     1441 acccttcatg ttctcgcaat cggagtcgat ccacgcgcgc tcgtgggtgc cgctgcagga
     1501 ctcgccggcg atccgcttca cctacgccgc gcacgtcacc gcgccgaaaa acatccgcgt
     1561 ggtgatgagc gcgccaaacg aggcgcacca cccgctcgac ggcgatttcc gcttcgtcca
     1621 gccgcacccg atcccgtcct acctgctcgc gatcgccgcc ggcgacctcg cggtggcgga
     1681 aaccggtccg cgctcggcgg tgtatgccga gccgtcgatg gtggccaagg ccgcacgcga
     1741 attcggcgac accgaaacca tcatcgagac cgccgagaag ctctacggcc cgtacccgtg
     1801 gggccgctac gacatcctcg tgctgccgcc ctcgttcccc tacggcggca tggaaaaccc
     1861 gaacatgacg ttcgccacgc cgaccatcat cgtcggcgac aagagcctgg tgagcgtgat
     1921 ttcgcacgag ctggcgcact cgtggagcgg caacctcgtc acctcggcca gctggcgcga
     1981 catctggctc aacgagggct tcaccaccta cgtgcagggg cgcatcaccg aagcggtata
     2041 cggcaagcgc caggccgacg aggaaaccct gctttccgcc cgcgcgctgg aaaagaagat
     2101 cggcacgctg accgaaaacc agcagaagct tgcgcctgac cccaagggcc tcggtggcga
     2161 cgacgcgctg tccgacgtgg cctacgacaa gggctcgtgg ttcctgcgca cgctggagac
     2221 gaagttcggc cgccccgtgt tcgacgcgta tttgaagggc tacttccagc acttcgcatg
     2281 gcacagcatc accactgagg aaatgctcgc gtacctcaag cccaacctgt tcgacaagta
     2341 ccccggcaag ctgggctggg cggaagtgca ggattgggtc tacggcaccg gcatccccaa
     2401 aaacgccgcg ctgcccggct cgccgcgctt cgacgcgatc gacaaggagc gcaccgcgtt
     2461 cctcgccggc aagctgccgg cagacaagct cgacgcgaag gactggaaca cacaggagtg
     2521 gatgtatttc ctcgaccgcc tgcccgacgc gccgacgctg gcccaggcgc aggcgctcga
     2581 cgccgcgtgg cacctcaccg gcacgccgaa tgcggaaatc ggcatgcgct ggtacatcca
     2641 cgccatcgcc gccggcgacc aggcggtgtg gcccgcggcc gccgagcaca tgacgcgcat
     2701 cgggcggctg tacctgacca tgccgctata ccgcgccttc gtgaagacgc ccgccggttt
     2761 cgcctacgcc gaaagcgtct acgccaaggc caaggtcggc taccacccgc tgacccggca
     2821 cgcggtagaa accctgttcg ccaaggcgcg cgccaagcag ccggcggcga agtaatccgc
     2881 acccagcgcg ccccggttcg ccggggtgcg acctatcgag cattccccca tgtccgcaac
     2941 ctcaccccgc ccgctctggc aacgcatgct gatccgccgg ctgaagttcc tcgccggcct
     3001 cgcggtggcc gtgatcgtgc tggttggcgg cagctacctc ttcgccccgc aatggctgat
     3061 gcaggccaac gactggcgcc aggcgctggc cgcgcacctg tccag
//
LOCUS       DASSVL010000076         2175 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_383012, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000076 DASSVL010000000
VERSION     DASSVL010000076.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2175)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2175)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2175
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_383012"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..574
                     /locus_tag="VFM52_01265"
     CDS             <1..574
                     /locus_tag="VFM52_01265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007512519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="transketolase C-terminal domain-containing
                     protein"
                     /protein_id="HET8763827.1"
                     /translation="VEHMASLRYIPNNQLWRPCDAVESAASWKAAIERRGAPSCLIFS
                     RQNLRHQQRSAQQVADILRGGYVLSDPLDTKFQAILIATGSEVELAMEASRALAQQGV
                     AVRVVSMPCTEVFDTQPLEYREGVLPGWCRARVAVEAATADFWRKYVGLDGEVVGMTT
                     FGASAPAPQLFEHFGFTVAHVVDAVKRVVK"
     gene            complement(704..1357)
                     /locus_tag="VFM52_01270"
     CDS             complement(704..1357)
                     /locus_tag="VFM52_01270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015446776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD hydrolase-like protein"
                     /protein_id="HET8763828.1"
                     /translation="MLCLFDLDGTLIDSEHGILACVKHALARLDVPAPAHEELRGWIG
                     PPLRHSFAPLLDHDAERIEAAVAYYHERFDTHGWREHAVYPGIEALIGRLRRSGHRLA
                     VVTSKPHRHAAPIVEHLPFGAAFERLYGPHPGSAHSEKAAMIGHALADFGSDPTDAVM
                     IGDRHFDIDGAVANRVRGFGVLWGFGGRAELEQAGAHAVAATPDELAALLLAPTPAA"
     gene            complement(1357..>2175)
                     /gene="pgk"
                     /locus_tag="VFM52_01275"
     CDS             complement(1357..>2175)
                     /gene="pgk"
                     /locus_tag="VFM52_01275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014161441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004618 - phosphoglycerate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate kinase"
                     /protein_id="HET8763829.1"
                     /translation="IAKAGTVVWNGPVGVFEFDAFGTAHRAQASTHGVIRYAPVAAAG
                     PLLCAELDALGKALEHPAHPLLAIVAGSKVSTKLTLLDNLIGKVDQLIVGGGIANTFI
                     AAMGHSVGNSLVEMDLLDAAKKVLADAKRRGAEVPMPIDVVVAPAFSAQAPATIKPVD
                     QVGADEMILDIGPQTAELYAALIAKAGTVVWNGPVGVFEFDAFGKGTETLARAIAASN
                     AFSIAGGGDTLAAVDKYGIADQVSYISTGGGAFLEFLEGKELPAVTALKARAAK"
BASE COUNT          322 a          744 c          773 g          336 t
ORIGIN      
        1 ggtcgagcac atggcgtccc tgcgctacat cccgaacaac cagctgtggc gcccgtgcga
       61 tgcggtggag tcggccgcgt cgtggaaggc ggcgatcgag cgcaggggcg cgccgtcgtg
      121 cctgatcttc tcgcggcaga acctcaggca ccagcagcgc agcgcacagc aggtggccga
      181 catcctgcgc ggcggctacg tgctgtccga tccgctggac acgaagttcc aggcgatcct
      241 gatcgccacc ggttcggaag tggaactggc gatggaggcg tcgcgcgcgc tggcgcagca
      301 gggcgtggcc gtgcgcgtgg tgtcgatgcc gtgcaccgaa gtgttcgaca cgcagccgct
      361 ggaataccgc gagggcgtgc tccccggttg gtgccgcgcg cgcgtggcgg tggaagcggc
      421 caccgccgat ttctggcgca agtacgtggg cctggacggc gaagtggtcg gcatgaccac
      481 gttcggcgcc tcggcgccgg cgccgcagct gttcgagcac ttcggcttca ccgtggcgca
      541 cgtggtcgat gcggtgaagc gcgtcgtcaa gtaaggctcc tcgcggtcac ctcccggtga
      601 tcgcgggaat gcctatgcga gcgcctcatt cggtagggcg ggcactgccc gccgctctgc
      661 ctcatccagc aaccgaaaca aaagccggct gacagtgtcc gccctacgca gcaggcgtcg
      721 gtgcgagcag cagggcggcg agttcgtcgg gcgtcgccgc cacggcatgg gcgccggcct
      781 gctccagttc cgcgcggccg ccgaagcccc acagcacgcc gaaaccgcgc acccggttgg
      841 ccaccgcgcc gtcgatgtcg aagtggcggt cgccgatcat caccgcatcg gtcgggtcgc
      901 tgccgaagtc ggccagcgcg tggccgatca tcgcggcctt ctcgctgtgg gcgctgcccg
      961 ggtgcggacc gtacagacgc tcgaaggccg cgccgaacgg aaggtgttcg acgatcggcg
     1021 cggcatggcg atgcggcttg ctggtgacca cggcgagccg gtggcccgag cggcgcagcc
     1081 gcccgatcag tgcctcgatg cccggataga ccgcgtgctc gcgccagccg tgcgtatcga
     1141 agcgctcgtg gtagtacgcc accgcggcct cgatgcgttc ggcgtcgtga tccagcagcg
     1201 gcgcaaaact gtgccgcaag ggcgggccga tccagccgcg cagctcctca tgcgccggcg
     1261 ccggcacgtc cagccgcgcc agtgcgtgtt tcacgcaggc gaggatgccg tgctcggaat
     1321 cgatcagggt gccgtcgaga tcgaacaggc agagcattac ttcgcggctc gcgccttcaa
     1381 cgcggtgacc gccggcagtt ccttgccttc gaggaattcc aggaacgcgc cgccgccggt
     1441 ggagatgtag gagacctggt cggcgatgcc gtacttgtcg accgcggcca gcgtgtcgcc
     1501 gccgccggcg atcgagaacg cgttcgacgc cgcgatcgcg cgcgccagcg tttcggtgcc
     1561 cttgccgaac gcgtcgaact cgaacacgcc gaccgggccg ttccacacca cggtgccggc
     1621 cttggcgatc agggcggcgt agagttcggc ggtctgcggg ccgatgtcga ggatcatctc
     1681 gtccgcaccg acttggtcga ccggcttgat cgtggccggg gcctgcgcgg agaacgccgg
     1741 cgccaccacc acgtcgatcg gcatcggcac ttcggcgccg cgtcgtttgg cgtcggccag
     1801 caccttcttc gccgcgtcga gcagatccat ctccaccagc gagttgccga ccgagtgtcc
     1861 catcgcggcg atgaaggtgt tggcgatgcc gccgccgacg atgagctggt cgaccttgcc
     1921 gatcaggttg tccagcaggg tcagcttggt cgacaccttg gagccggcca cgatcgccag
     1981 cagcggatgc gccgggtgct ccagcgcctt gcccagcgca tccagctcgg cgcacagcaa
     2041 cgggccggcg gcggcgaccg gggcgtacct gatcacgccg tgggtcgagg cttgtgcgcg
     2101 atgcgcggtg ccgaacgcgt cgaactcgaa cacgccgacc gggccgttcc acaccacggt
     2161 gccggccttg gcgat
//
LOCUS       DASSVL010000077         5524 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_326568, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000077 DASSVL010000000
VERSION     DASSVL010000077.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 5524)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5524)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5524
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_326568"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1266)
                     /locus_tag="VFM52_01280"
     CDS             complement(<1..1266)
                     /locus_tag="VFM52_01280"
                     /EC_number="1.3.8.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007510829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase"
                     /protein_id="HET8763830.1"
                     /translation="MSVILTLLAALIASGACAYHRTRLRTFAVAAPIATLVVGLAAGA
                     PGTMIVLLVIELGIALPLLATAFRKRQISAPLLKLFAKVTPKLSDTERTALEAGTVGF
                     EGELFSGKPDWHELLKQPKPVLSVEEQAFMDGPVETLCGMIDDWQITHELADLAPEVW
                     AFIKKNKFFGMIIPKRYGGLEFSALAHSAVLQKLNSMSATVASTVAVPNSLGPAELLL
                     HYGSEEQKNQLLPKLAVGEEIPCFALTGPYAGSDATSIPDTGIVCKQTVDGVDTFGVR
                     LTFDKRYITLAPVATIVGLAFHMYDPEHLLGDKEDVGITLALLPRDTQGLEIGRRHLP
                     LNIPFQNGPVRGKDVFVPLTTLIGGREMAGHGWRMLVECLSVGRAISLPSNATGGVRA
                     AVAATGAYARMRKQFGLSIARFEGVEEALA"
     gene            complement(1287..2177)
                     /locus_tag="VFM52_01285"
     CDS             complement(1287..2177)
                     /locus_tag="VFM52_01285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008439620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HET8763831.1"
                     /translation="MDSCAPLASSDFTTADGLHLAVETRVPHGSPCLLFAHGFGQTRG
                     AWGGAVAALAERGCRCISFDARGHGESDHLRGGAYRMQQFADDLLGLARAQPRPPVLV
                     GASMGGLLGLVVAGETQPAPFRALVLVDITPRWETRGVERILAFMQANPDGFASYADA
                     AERIAAYLPQRRGRKSEAQLKPLLREGADGRLRWHWDPALLGGDFIGDSERYQPRLLA
                     AARRIEVPVLLLSGARSDVVSHATVAEFLKLVPHARHVEVPGATHMLAGDANDAFTRE
                     IAGFIHRLNDVGATAGVHAM"
     gene            2276..2854
                     /locus_tag="VFM52_01290"
     CDS             2276..2854
                     /locus_tag="VFM52_01290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007807633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HET8763832.1"
                     /translation="MDSTHKPERTRLTAEDWELAALQMIADHGVGALAVEALARELGV
                     TKGSFYWHFPSREALLQAALDRWEEHGEREVLGQIEKIADPRQRLPELFRRVAHELQP
                     HRVYAALLKALDHPLVVPVMARVSQRRTEFLNTAYREAGLPPREALNRARLTYAAYVG
                     FLQLNFTLGLPRLNHDEFDSYIEHMIATLIPA"
     gene            2862..4766
                     /locus_tag="VFM52_01295"
     CDS             2862..4766
                     /locus_tag="VFM52_01295"
                     /EC_number="4.1.1.32"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019467115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004611 - phosphoenolpyruvate
                     carboxykinase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0017076 - purine nucleotide binding
                     [Evidence IEA];
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxykinase (GTP)"
                     /protein_id="HET8763833.1"
                     /translation="MQDRHERRRGAVFAACCARPCQCQCVQTTVAPTFCRKTSEDTMA
                     STLPALERWVNEVAALTKPAAVHWCDGSQTEYDALVARMLADGTLLELNQQTHPRCYL
                     HRSDPRDVARVERLTVICHEREEDAGPNNHWMAPAEAHAKLDALFAGCMAGRTMYVIP
                     YCMGPIDSPLARCGVEITDSPYVVANMRIMTRMGAAAQARIERDGEFVRGLHSIGELD
                     PERRWIMHFPAERLIQSFGSGYGGNALLGKKCHALRIASNQGRDEGWLAEHMLIVGIQ
                     NPQGKTHYIAAAFPSACGKTNLSMLIPPEAYQHAGWKVWTVGDDICWMRPGADGRLYA
                     INPEAGFFGVAPGTSQATNPNALATIAHDTIYTNVAVTADNQPWWEGLPGTPVTDWQG
                     RPYDPANGPAAHPNSRFTASARQCPTWSEEAENPHGVPISAIVFGGRRPTLLPLVMEA
                     RDWAHGVLLGAAMGSETTAAAAGAVGVLRRDPMAMKPFCGYHYGDYFAHWLSFAKPGA
                     KLPKIFHVNWFRKDAAGHFLWPGFGENLRVLEWMLARVEGTAHGVETPVGTLPRADEL
                     NLAGLKLAPGATDELLAIDRAGWQAELAAIGDYLEGFAPRLPARLRAEQQRVAAALAN
                     PAVRAATEVA"
     gene            4871..5419
                     /locus_tag="VFM52_01300"
     CDS             4871..5419
                     /locus_tag="VFM52_01300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019662138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HET8763834.1"
                     /translation="MPATPVATDPDTDDVHAACAGDRMAFQRLYRRHVDRVHGAMCRL
                     AGYDRARAEDLTQEAFIRAWQKLSQFRHQSTFGTWLYRLAINLALMALRAQRADPVGG
                     LDADALPEPGATPFCAAERAELQRAIGRLPARARAVLVLHDIEGWHHEEIGAALAIAT
                     GTSKAQLHRARALLRVALGDPT"
BASE COUNT          892 a         1991 c         1844 g          797 t
ORIGIN      
        1 cgcgagcgct tcttccacgc cttcgaagcg ggcgatggaa agcccgaact gcttgcgcat
       61 gcgcgcatac gcacccgtcg cggccaccgc agcgcgcacg ccaccagtgg cgttggacgg
      121 cagcgagatc gcgcgcccga ccgacaggca ttccaccagc atgcgccagc cgtggccggc
      181 catctcgcgc ccgccgatca gcgtggtcag cggcacgaac acgtccttgc cgcgcaccgg
      241 cccgttctgg aacgggatgt tgagcgggag gtggcggcgg ccgatctcca gcccctgggt
      301 gtcgcgcggc agcagcgcca gcgtgatgcc cacgtcctcc ttgtcgccca gcaggtgctc
      361 cgggtcgtac atgtggaacg cgaggccgac gatggtcgcc accggcgcca gcgtgatgta
      421 gcgcttgtcg aaggtgagcc gcacgccgaa cgtgtcgacg ccatccacgg tctgcttgca
      481 cacgatgccg gtgtcgggga tcgaggtggc gtccgagccg gcatacgggc cggtcagcgc
      541 aaagcacggg atttcctcgc cgacggccag cttcggcagc aactggttct tctgctcctc
      601 gctgccgtag tgcagcagga gctcagccgg cccgagcgag ttcggcacgg cgaccgtcga
      661 ggccaccgtg gccgacatcg agttgagctt ctgcagtacc gccgaatgcg ccagcgcgga
      721 gaactccagg ccgccgtagc gcttcggaat gatcatgccg aagaacttgt tcttcttgat
      781 gaaggcccag acttccggcg ccaggtcggc cagctcgtgg gtgatctgcc agtcgtcgat
      841 catgccgcac agcgtttcga ccgggccgtc catgaaggcc tgctcctcga ccgacagcac
      901 cggcttcggc tgcttgagca gttcgtgcca gtccggcttg ccggagaaca gctcgccctc
      961 gaagccaacg gtgccggcct cgagcgcggt gcgctcggtg tccgacagct tcggcgtgac
     1021 cttggcgaac agcttgagca gcggcgcact gatctgccgc ttgcggaacg ccgtggcgag
     1081 cagcggcaac gcgatgccca gctcgatcac cagcagcacg atcatcgtcc ccggcgcgcc
     1141 cgccgcgagg ccgacgacca gtgtcgcgat cggggcggcc acggcgaagg tgcgcaggcg
     1201 ggtacggtgg taggcgcagg cgccactggc gatcagcgcg gcaagcaagg tcaggatcac
     1261 ggacatcgtt ggcaccctcg ttgcggttac atggcatgga cgccggcagt ggcgcccacg
     1321 tcgttcaaac ggtggatgaa gcctgcgatt tcgcgggtga acgcgtcgtt cgcgtctccg
     1381 gcaagcatgt gcgtcgcacc cggcacttcg acgtgtcgcg catgcggcac cagcttcagg
     1441 aattcggcca cggtcgcgtg cgacaccacg tcgctgcgcg cgccggaaag cagcagcacc
     1501 ggcacctcga tccggcgcgc cgcggcgagc aggcgcggct ggtagcgctc gctgtcgccg
     1561 atgaaatcgc cgccgagcag cgccggatcc cagtgccagc gcaggcggcc atcggcccct
     1621 tcgcgcagca gcggcttcaa ctgcgcctcg ctcttgcgcc cccgccgctg cggcaggtag
     1681 gccgcaatcc gctcggcggc gtcggcatag ctggcaaagc cgtccgggtt ggcctgcatg
     1741 aacgcgagga tgcgttcgac cccgcgggtt tcccagcgcg gcgtgatgtc gaccagcacc
     1801 agcgcgcgga acggcgccgg ttgcgtctcg cccgccacca ccaggccgag caggccgccc
     1861 atcgacgccc cgaccagcac cggtggccgc ggctgcgcgc gcgccaggcc gagcaggtcg
     1921 tcggcgaatt gctgcatgcg gtaggcgccg ccccgcaggt gatcgctctc gccatggccg
     1981 cgcgcatcga agctgatgca gcggcacccc cgttccgcca acgcggcgac ggcgccgccc
     2041 cacgcgccac gggtctggcc gaagccatgc gcgaacagca ggcagggact gccgtgcggg
     2101 acgcgggttt ccaccgcgag atgcaggcca tcggcggtgg tgaaatccga ggaagcgagg
     2161 ggcgcgcagg agtccatacg ggcgagtatg gattgccgat tccatcatcg tcaacccacc
     2221 tgacgtgcgc ccggcggcgg attacaaagc gcgaggcagc cgctaccata cggcgatgga
     2281 ttcaacccac aagccggaac gtacccgcct caccgcggaa gattgggagc tcgccgcgct
     2341 gcagatgatc gccgaccacg gcgtcggcgc gctggccgtc gaggcgctgg cgcgcgagct
     2401 gggcgtgacg aaaggcagct tctactggca tttcccctcg cgcgaggcgc tgctgcaggc
     2461 cgcgctggat cgctgggagg aacacggcga gcgcgaggtg ctcggccaga tcgagaagat
     2521 cgccgacccg cgccagcgcc tgcccgagct gttccgtcgc gtcgcccacg agttgcagcc
     2581 gcaccgcgtg tatgcggcgc tgctcaaggc gctcgaccat ccgttggtgg tgccggtgat
     2641 ggcgcgcgtg tcgcaacggc gtaccgagtt cctgaacacc gcctaccgcg aggccggcct
     2701 gccgccgcgc gaggcgctga accgtgcgcg gctcacctat gcggcgtacg tcggctttct
     2761 gcagctcaac ttcacgctcg gcctgccgcg cttgaaccac gacgagttcg acagctacat
     2821 cgagcacatg atcgccacgc tgattccggc ctgagcgcag cctgcaggat cgacacgaac
     2881 ggcgccgcgg cgccgttttt gctgcgtgct gcgcccgacc ttgccaatgc caatgtgtcc
     2941 aaactacggt cgcgcctacc ttttgccgca agaccagtga ggacacgatg gccagcaccc
     3001 tgcccgcgct cgagcgttgg gtcaatgaag tcgccgcgct gacgaaaccc gccgccgtcc
     3061 actggtgcga cggctcgcaa accgaatacg acgcgctggt cgcgcggatg ctcgccgacg
     3121 gcacgctgct cgaactgaac cagcagaccc atccgcgctg ctacctgcac cgctccgatc
     3181 cgcgcgacgt cgcgcgcgtc gagcgcctca ccgtgatctg ccacgagcgc gaggaggacg
     3241 ccggcccgaa caaccactgg atggccccgg cggaagccca cgcgaagctg gacgcgctgt
     3301 tcgccggctg catggccggc cgcaccatgt acgtgatccc gtactgcatg gggccgatcg
     3361 attcgccgct cgcgcgttgc ggcgtggaga tcaccgacag tccgtacgtg gtcgccaaca
     3421 tgcgcatcat gacccgcatg ggcgccgccg cgcaggcgcg catcgagcgc gacggcgagt
     3481 tcgtgcgcgg cctgcattcg atcggcgagc tcgatccgga gcggcgctgg atcatgcatt
     3541 tcccggcgga acggctgatc cagtcgttcg gctccggcta cggcggcaac gcgctgctcg
     3601 gcaagaagtg ccacgcgctg cgcatcgcct cgaaccaggg gcgcgacgaa ggctggctgg
     3661 ccgagcacat gctgatcgtc ggcatccaga acccgcaggg gaaaacccat tacatcgccg
     3721 ccgcgttccc gtccgcgtgc ggcaagacca acctgtcgat gttgataccg cccgaggcgt
     3781 atcagcatgc cggctggaag gtgtggacgg tgggcgacga catctgctgg atgcgccctg
     3841 gcgccgacgg ccggctgtac gcgatcaacc ccgaggccgg cttcttcggc gtcgcccccg
     3901 gcaccagcca ggcaaccaac cccaatgcgc tggcgacgat cgcgcacgac acgatctaca
     3961 ccaacgtcgc ggtcaccgcc gacaaccagc catggtggga aggcctgccc ggcacgccgg
     4021 tcaccgactg gcagggccgt ccgtacgacc cggccaatgg tcccgccgcc cacccgaatt
     4081 cacgcttcac cgccagcgca cggcaatgcc ccacgtggtc ggaggaagcc gagaacccgc
     4141 acggcgtgcc gatcagcgcc atcgtgttcg gcgggcgacg tccgaccttg ctgccgctgg
     4201 tgatggaggc gcgcgactgg gcgcacggcg tgctgctcgg cgccgcgatg ggctcggaaa
     4261 ccacggctgc cgcggcgggc gccgtcggcg tgctgcgccg cgacccgatg gcgatgaagc
     4321 cgttctgcgg ctaccactac ggtgattatt tcgcgcactg gctcagcttc gccaaacccg
     4381 gcgccaaact gccgaagatc ttccacgtca actggttccg caaggacgcc gccgggcatt
     4441 tcctgtggcc cggctttggc gagaacctgc gcgtgctcga gtggatgctg gcgcgcgtcg
     4501 aaggcaccgc gcacggcgtc gaaacaccgg tcggcacgct gccgcgcgca gacgagctga
     4561 atctcgccgg cttgaaactc gcccctggcg ccaccgatga actgctggcc atcgaccgcg
     4621 ctggctggca ggccgaactt gccgccatcg gcgactacct cgaaggcttt gcgccacgcc
     4681 tgccggcgag gctgcgcgcc gaacagcaac gcgtcgccgc cgccctggcg aaccccgccg
     4741 tacgcgcggc caccgaggtc gcctgaagcc cgcgtttgca tcgccgccgg gcggcgatgc
     4801 aaacctttcc gccaagatgg gcatccaagc tggcaagatg cccgtaccct gcgccaccgc
     4861 cgcgtccccc atgcccgcca cgccggtcgc caccgatccg gataccgacg acgtgcacgc
     4921 cgcatgcgcc ggcgaccgca tggcgttcca gcgcctgtac cggcgccacg tggatcgcgt
     4981 gcacggcgcg atgtgccggc tcgccggcta cgaccgtgcc cgcgccgagg atctgaccca
     5041 ggaagccttc atccgcgcct ggcaaaagct gtcgcaattc cgccaccaga gcacgttcgg
     5101 cacctggctg tatcgcctcg cgatcaacct cgcgctgatg gcactgcgcg cgcagcgcgc
     5161 cgatccggtc ggcggcctcg acgcggacgc gctgccggag cccggtgcca cgccgttctg
     5221 cgccgccgag cgcgccgaat tgcagcgtgc gatcggccgt ctgccagcgc gtgcccgcgc
     5281 ggtgctggtc ctgcacgaca tcgagggctg gcaccacgag gagatcggcg cggcgctggc
     5341 gatcgccacc ggcacctcga aagcacaatt gcaccgcgcg cgggccctgc tgcgcgtcgc
     5401 gctgggagac ccgacatgaa cgagatcgaa tggcatcgca cgctgcgcac cctgcggcag
     5461 ccggttccac cggcgcatga cctgtggccg gccatcgccg ccgcaatcga cgaaccgact
     5521 ccgg
//
LOCUS       DASSVL010000078         2053 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_15797, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000078 DASSVL010000000
VERSION     DASSVL010000078.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2053)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2053)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2053
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_15797"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(136..579)
                     /gene="ccmE"
                     /locus_tag="VFM52_01305"
                     /pseudo
     CDS             complement(136..579)
                     /gene="ccmE"
                     /locus_tag="VFM52_01305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007082070.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0017003 - protein-heme linkage [Evidence
                     IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c maturation protein CcmE"
     gene            complement(602..802)
                     /gene="ccmD"
                     /locus_tag="VFM52_01310"
     CDS             complement(602..802)
                     /gene="ccmD"
                     /locus_tag="VFM52_01310"
                     /EC_number="7.6.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019466002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0015886 - heme transport [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heme exporter protein CcmD"
                     /protein_id="HET8763835.1"
                     /translation="MQHFLAMGGYAAYVWPAYAVFFAVLAADSLAPRLRRRRILRELN
                     ARLARQAARARREPADSTTPPP"
     gene            complement(808..1566)
                     /locus_tag="VFM52_01315"
     CDS             complement(808..1566)
                     /locus_tag="VFM52_01315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008434596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme ABC transporter permease"
                     /protein_id="HET8763836.1"
                     /translation="MSKWIPLWFHKLGSPPTFYRFAGAVWPWALALALACGAFGLYGG
                     LVLAPADYQQGDAYRIIFIHVPSAWMSMFVYAVMGMAGFVALVWRMKLAEVVAMESAP
                     IGAAFTLVTLVTGSLWGKPMWGTWWTWDARLTSELVLLFLYLGVIGLYHAFEDRRQGA
                     RAASFLAIVGVVNVPIVHYSVTWWNTLHQGSTVDIFGHSKMPWEMLWPLLVVTLATKF
                     YYAASLCRRAQADLLALEGGKDWVRALAAAEKAR"
     gene            complement(1570..>2053)
                     /locus_tag="VFM52_01320"
     CDS             complement(1570..>2053)
                     /locus_tag="VFM52_01320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007508979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015232 - heme transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015886 - heme transport [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="heme exporter protein CcmB"
                     /protein_id="HET8763837.1"
                     /translation="MLLALDAMFASDIEDGSLEQLLLAPQALAPLLGMKILAHWLTTA
                     LPLIVVAPLLAGMLHLPAAAMPALLLGLLLATPLLSLLGAVLVALTAGTRRSGMLLAL
                     MLLPLCVPVVIFAAGAVAAAQQGLPWLAPVAWLAAALILTVVLAPLACAAALRLALDA
                     "
BASE COUNT          354 a          699 c          738 g          262 t
ORIGIN      
        1 ccaccgccat cagcgcgcgg tggccgcgcc aggcgccgac gagcggcagc gcgccctggg
       61 cgagggcgag caggaaggcg agtaccagcg cgagctggcc gagttcgggg gtgatgggct
      121 cttgtcctgt gcggccgctt ccttcacctt cgcgtccgca tgcgccttgg ccatcgcttc
      181 cttcagctcc ttgggcatgt aggtctcgtc atgcttggcc agcacctcgg tagcgacgaa
      241 gtggttgccg tccatgtggc cggtggcgat caccgactgg ttgtcgcgga acaggtcggg
      301 caggatgccg gtgtactcca ccggcagggc gccgccggcg tcgaccacgg tgaaatgcac
      361 ttccagcgag tggtcgctgc gtcggatcga accggccttg accatgccgc ccaggcggaa
      421 gctgcggtgg ccgttggcct gcccggcctc gacctggctg ggggtgaaca ggtagttcat
      481 gttctgctgc agcgcgtaca cgccgacgcc gatggccagc gcggcggcga tggccaccac
      541 gaccacgatg gtgaggcggc gcttgcgggt ggggttcatg ctcatgcggg gtgtggccgt
      601 gtcagggcgg gggcgtagtg gagtcggcgg gttcgcgccg cgcgcgcgcg gcctggcgcg
      661 cgaggcgggc gttcaactcg cgcaggatgc ggcggcggcg caggcgcggc gccaggctgt
      721 cggcggcgag caccgcgaag aacacggcat aggccggcca cacgtaggcg gcgtagccgc
      781 ccatggcgag aaagtgctgc agcgcgctca ccgggccttc tccgcggcgg cgagcgcgcg
      841 cacccagtcc ttgccgcctt ccagcgcgag caggtccgcc tgtgcgcggc ggcacaggct
      901 ggcggcgtag tagaacttgg tggccagcgt gaccaccaag agcggccaga gcatctccca
      961 cggcatcttc gagtggccga agatgtctac cgtgctgccc tggtgcagcg tgttccacca
     1021 cgtcaccgag taatgcacga tgggcacgtt gacgacgccg acgatggcga gaaaactcgc
     1081 cgcgcgcgcg ccctggcggc gatcctcgaa ggcgtggtac aggccgatca cgcccaggta
     1141 caggaacagc agcaccagct cggaggtgag ccgggcgtcc caggtccacc aggtgcccca
     1201 catgggcttg ccccacagcg agccggtgac cagggtgacc agggtgaagg ccgcgccgat
     1261 cggcgccgat tccatcgcca ccacctcggc cagtttcatg cgccacacca gcgccacgaa
     1321 accggccatg cccatcaccg catagacgaa catgctcatc cacgcgctgg gcacgtggat
     1381 gaagatgatg cggtaggcat cgccctgctg gtaatccgcc ggcgccagca ccaggccgcc
     1441 gtagaggccg aaggcgccgc acgccaaggc cagcgccagc gcccacggcc acaccgcgcc
     1501 ggcgaagcgg tagaaagtgg gcggcgagcc gagcttgtga aaccagagcg gaatccactt
     1561 cgacatcaat caggcgtcca gggcaaggcg cagggccgcc gcgcaggcca gcggcgccaa
     1621 caccacggta aggatgagcg cggcggccag ccaggcgacg ggtgccagcc atggcaggcc
     1681 ctgctgggcg gctgccaccg cgccggccgc gaagatcacc acgggcacgc aaagcggcag
     1741 caacatcaag gccagcagca taccagagcg gcgggtgccg gccgtcagcg ccaccagtac
     1801 cgcgccgagc aggctgagca gcggcgtggc cagcagcaac cccagcagca gtgcgggcat
     1861 ggcggccgcc ggcaggtgca gcatgccggc caggagcggc gccaccacga tcagcggcaa
     1921 cgcggtggtg agccagtgcg cgaggatctt catgcccagc agcggcgcca gcgcctgcgg
     1981 cgcgagcagc aactgctcca gcgaaccatc ctcgatgtcg ctggcgaaca tggcatccag
     2041 cgccagcagc atg
//
LOCUS       DASSVL010000079         5291 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_100569, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000079 DASSVL010000000
VERSION     DASSVL010000079.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 5291)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5291)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5291
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_100569"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1289
                     /locus_tag="VFM52_01325"
     CDS             <1..1289
                     /locus_tag="VFM52_01325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008209672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0035673 - oligopeptide transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006857 - oligopeptide transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="oligopeptide transporter, OPT family"
                     /protein_id="HET8763838.1"
                     /translation="VPYFTHLHWTAGAAAEVAQAGWSHYVRFIGAGTIGVAAIWTLAK
                     LVKPVIGGLAGAMAASKVRKAGKLDTLPRTERDMPIGIVGIITLLCLIPVGWLLGHFA
                     NVSGLGSHTALLVVGGVLFVVILSFLVSAVCGYMAGLIGSSNSPLSGVGILVVIIAAL
                     LLVVGVKSLLPAEAGKALVAFALFITSIVFAVASIANNNLQDLKTGQLVDATPSLQQW
                     ALVIGVIAGALVIPPVMDLLNQAYGFLGAPGADPSRALPAPQAGLISALAQGVITGDI
                     DWSLIIIGGVIGVVIIVFDEILAKSTKSVRLPPLAVGLGIYLPTSTTLMVVVGALVGA
                     WFDKRAERGPKPEPTKQLGVLLASGLIVGESLLGVVVAALVAFSDQLGFANHDAPLAV
                     VGKGFHDIAIWIGGAAFAATVYVMYRWIARMGQGRG"
     gene            1394..4000
                     /gene="mprF"
                     /locus_tag="VFM52_01330"
     CDS             1394..4000
                     /gene="mprF"
                     /locus_tag="VFM52_01330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008213843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional lysylphosphatidylglycerol
                     flippase/synthetase MprF"
                     /protein_id="HET8763839.1"
                     /translation="MEQDKVEASPRAAEALTPPSPRTVWLHRVIGPLLSVGMLCLALW
                     ALHLLARDVSYHEIREYLQSVSRPRLLLAIVLTTLGFGVMSLYDRFGLATLGKSLPWR
                     RVTLISFISYAFSHAIGMSFLVSGSIRYRFYVQNGLSTGEIAKLVLYCTVAFWLGLLA
                     LTGTTLLVVPLPSGLPMSTWRVTLASILVAIPLAWLAAGFVRRPFRLWRWQVHIPAPG
                     TTLRQIVVGALDWWLAAAVMYVLMPDRLNAGFGHFLAIFVIAQIAGLISHVPGGLGVF
                     EAVMLAGFGATGNQALAAPILGSLAAFRIVYYLMPLCAATVLVLQREARGLHRPALWS
                     PWFNNLLPSFFAGLTLVSGAVLLFSGATKALPQRMAILRDVLPLSVLEISHLLASVVG
                     MLLLILARGLQRRLDAAYWLTLILLVSGAVFSLLKGIDYEEATLLALLALALFPAHKL
                     FYRRASLFSGRFSPGWIVAIVAVFGCATWLVMFSYKHVDYSNSLWWEFSFHEGGAPRA
                     LRALVGAAVAGLLFALAMLIRPQRSRHVPPTEAELQRALPLIKHYRSAQAHLALMGDK
                     HLLFAPEGDAFLMYDTEGRSWVAMGDPVGEDENARRELVWSFLEQCERAGGWPVFYEV
                     SPVDLDLYLEVGMNLLKIGEEARVELAAFNLDGKSKKTLRGTVNKLTRDGLHLEIVPA
                     ERVPEFLPRLREISDAWLGDKRAHEKRFSLGAFDPAYLVRTPLALVWQGERLVAFANM
                     LLTDTKEEASVDLMRFLPDGPTGIMDFLFIELMQWARGEGYRWFNLGMAPLAGLTNRR
                     LSPLWNRFGALVFGRGERFYNFQGLKRYKDKFDPEWEPRYMATPGGIALPLILANVAS
                     LISGGLVGVVRR"
     gene            4027..4800
                     /locus_tag="VFM52_01335"
     CDS             4027..4800
                     /locus_tag="VFM52_01335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007081720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AcvB/VirJ family lysyl-phosphatidylglycerol
                     hydrolase"
                     /protein_id="HET8763840.1"
                     /translation="MWTGVGVAVLGLALAVWTPFSKPSLDASTVLLTPPATLAAPAGD
                     GDVLTILYSGDGGWADLDKQLGNAFVARGIPVVGINAFKYFWRNRPPDVAAAELDALM
                     TKYLDAWHKRRVWLVGFSFGADVLPTLIDKLSLQNRARIAQLVLLSPSRDASFEIQFE
                     GYMMAQGRIKAFVKTLLEKFNKVPHYDALPPVVAINHAFPVVCYYGRQEADDSLCTDP
                     GLPAWVTVHAKNGDHHFEGGYQPLAAQMINELPRQAATP"
     gene            4933..>5291
                     /locus_tag="VFM52_01340"
     CDS             4933..>5291
                     /locus_tag="VFM52_01340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007509143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA methyltransferase"
                     /protein_id="HET8763841.1"
                     /translation="MTATGPASVDDAALAALFVPFLGGDLPSPGDRVLFLRARLGAVV
                     REWARPAWCCVQSFLPFADALGDAGLATAPVAPAARFPCVLLLPPRQRDERRALFAQA
                     VDHLEAGGVLVASVANA"
BASE COUNT          674 a         1758 c         1886 g          973 t
ORIGIN      
        1 cggtgccgta tttcacgcac ctgcattgga ccgccggcgc ggcggccgag gtggcgcagg
       61 ccggttggag ccattacgtg cgcttcatcg gtgctggcac gatcggcgtc gccgcgatct
      121 ggacgctggc gaagctggtc aagccggtga tcggcgggct ggcgggtgcg atggcggcct
      181 cgaaggtgcg caaggcgggc aagctcgaca ccctgccgcg caccgagcgc gacatgccga
      241 tcggcatcgt cggcatcatc acgctgctgt gcctgattcc ggtcggctgg ctgctcgggc
      301 acttcgctaa cgtcagcggg ctcggctcgc acaccgcctt gctggtcgtc ggcggcgtgc
      361 tgttcgtggt gatcctgagc tttctggtat ccgccgtgtg cggctacatg gcgggcctga
      421 tcggctccag caacagcccg ctttccggcg tcggcattct cgtcgtcatc atcgcggcgc
      481 tgctgctggt ggtgggcgtg aagtcgctgc tgccggcgga ggcgggcaag gcgctggtgg
      541 cgtttgcgct gttcatcacc tcgatcgtgt tcgcggtggc gtcgatcgcc aacaacaacc
      601 tgcaggatct gaagaccggg cagctggtcg acgccacgcc gtcgctgcag cagtgggcgc
      661 tggtgatcgg cgtgatcgcc ggcgcgctgg tgatcccgcc agtgatggat ctgttgaacc
      721 aggcctacgg cttcctcggc gcaccgggcg ccgacccgtc gcgtgccttg ccggcgccgc
      781 aggccgggct gatctcggcg ctggcgcagg gcgtcatcac cggcgacatc gattggagcc
      841 tgatcatcat cggcggcgtg atcggcgtgg tcatcatcgt gttcgacgag atcctcgcga
      901 agagcacgaa gtcggtgcgc ctgccgccgc tggccgtggg cctgggcatc tacctgccga
      961 cctcgaccac gctgatggtc gtcgtcggcg cgctggtcgg cgcgtggttc gacaagcgcg
     1021 cggagcgtgg tccgaagccc gagccgacga agcagctcgg cgtgctgctg gcttccggcc
     1081 tgatcgtcgg cgagagcctg ctcggcgtgg tcgtcgccgc gctggtcgcg ttctccgacc
     1141 agctcggctt tgccaaccac gacgccccgc tcgccgtcgt cggcaagggg ttccacgaca
     1201 tcgcgatctg gatcggcggc gcggcgttcg cggcgacggt gtacgtgatg tatcgctgga
     1261 tcgcgcgcat ggggcagggg cggggctgac cacgacgatc ggcggtgtcc cccgccagcg
     1321 gccgccgtgc ggcacgcgtc aacggtgggc cgctgcccta aactagccgc ctccgaaggg
     1381 aaacgagtac cgcgtggagc aggacaaagt tgaagcatcg ccgcgcgcgg ccgaggcgct
     1441 gaccccgccc agtccgcgca ccgtgtggct gcatcgtgtg atcggcccgc tgctgtcggt
     1501 cggcatgctg tgcctggcgt tgtgggcgct gcatctcctg gcgcgcgacg tcagctacca
     1561 cgagattcgc gaatacctgc agagcgtgtc gcggccgcgg ctgttgctgg ccatcgtgct
     1621 gaccacgctc ggcttcggcg tgatgtcgct gtacgaccgc ttcggcctcg ccaccctcgg
     1681 caagtcgctg ccgtggcggc gcgtgacgct gatctcgttc atcagctacg cgttcagcca
     1741 cgcgatcggc atgtcgttcc tggtgtccgg ctcgatccgc taccggttct acgtgcagaa
     1801 cgggttgtcc accggcgaga tcgcgaagct ggtgctgtat tgcacggtgg cgttctggct
     1861 cggcctgctg gcactgaccg gcaccaccct gctggtcgtg ccgctgccgt cgggcctgcc
     1921 gatgagcacg tggcgggtga cgctggcctc gatcctggtg gcgattccgc tggcgtggct
     1981 cgccgccggc ttcgtgcgcc ggccgttcag gctgtggcgc tggcaggtgc atatcccggc
     2041 accgggcacc acgctgcgcc agatcgtggt cggcgcgctc gactggtggc tggcggccgc
     2101 ggtgatgtac gtgctgatgc cggatcggct gaacgccggg ttcggccatt tcctcgcgat
     2161 cttcgtgatc gcgcagatcg ccggcctgat cagccacgtg ccgggcgggc tcggggtgtt
     2221 cgaggcggtg atgctggccg gcttcggcgc caccggcaac caggcgctgg cggcgcccat
     2281 cctcggctcg ctggccgcgt tccgcatcgt gtattacctg atgccgctgt gcgcggcgac
     2341 agtgctggtg ctgcagcgcg aggcgcgcgg cctgcaccgg ccggcgctgt ggtcgccgtg
     2401 gttcaacaat ctcttgccct cgttctttgc cgggctgacg ctggtgtccg gtgcggtgct
     2461 gctgttttcc ggcgcaacca aggcgctgcc gcagcgcatg gcgatcctgc gcgacgtgct
     2521 gccgctgtcg gtgctggaga tctcgcacct gctcgccagc gtggtcggca tgctgctgtt
     2581 gatcctggcg cgtggcctgc agcggcggct ggacgcggcg tactggctga ccctgatcct
     2641 gctggtgtcg ggcgcggtgt tttcgctgct caagggcatc gactacgagg aggcgacgct
     2701 gctggcgctg ctggcgctgg cgctgttccc cgcgcacaag ctgttctatc ggcgcgcgtc
     2761 gctgttcagc gggcgcttct cgccaggctg gatcgtcgcc attgtcgccg tgttcggctg
     2821 tgcgacctgg ctggtgatgt tcagctacaa gcacgtcgac tacagcaaca gcctgtggtg
     2881 ggagttcagc ttccacgagg gcggcgcgcc gcgggccttg cgcgcgctgg tcggcgcggc
     2941 ggtggccggg ctgttgttcg cgctggcgat gctgatccgc ccgcagcgtt cgcgccacgt
     3001 gccgccgacc gaagccgagt tgcagcgtgc cctgccgctc atcaagcact atcgctccgc
     3061 gcaggcgcac ctggcgctga tgggcgacaa gcacctgctg tttgcgccgg agggcgacgc
     3121 gttcctcatg tacgacaccg aggggcgcag ctgggtcgcg atgggcgatc cggtcggcga
     3181 agacgagaac gcgcgccgcg aactggtgtg gagcttcctt gaacagtgcg agcgcgccgg
     3241 cggctggccg gtgttctacg aagtcagccc ggtggatctc gacctgtatc tcgaggtggg
     3301 catgaacctc ttgaagatcg gcgaggaggc gcgcgtcgag ctggcggcgt tcaacctcga
     3361 cggcaagtcc aagaagacct tgcgcggcac ggtcaacaag ctcacccgcg acggcctgca
     3421 cctggagatc gtgccggccg agcgggtgcc cgagttcctg ccgcggctgc gtgagatctc
     3481 cgacgcgtgg ctcggcgaca agcgcgcgca cgagaagcgc ttctcgctcg gcgcgttcga
     3541 cccggcctac ctcgtgcgca cgccgctggc gctggtctgg cagggcgagc gcctggtggc
     3601 gttcgccaac atgctgctga ccgacaccaa ggaggaggcg tcggtggacc tcatgcgctt
     3661 cctgcccgat ggcccgaccg gcatcatgga tttcctgttc atcgagctga tgcagtgggc
     3721 gcgcggcgag ggctaccgct ggttcaacct cggcatggcg cccctggccg ggctcaccaa
     3781 ccgacgtctg tcgccgctgt ggaaccgctt cggcgcgctg gtgttcggcc gcggcgagcg
     3841 tttctacaat ttccagggcc tcaagcgcta caaggacaag ttcgacccgg aatgggagcc
     3901 gcgctacatg gccacgccgg gcggcatcgc gttgccgctg atcctcgcca acgtggcgag
     3961 cctgatctcc ggcggcctgg tgggcgtggt gcggcgatga gccggtcgaa gcggggcagg
     4021 tggatcatgt ggacaggcgt cggcgtggcg gtactcgggt tggcgctggc ggtgtggacg
     4081 ccgttctcga agccgagcct ggatgcctcc accgtgctgc tcacgccgcc ggcgacgctt
     4141 gccgcgccgg ccggtgacgg cgacgtgctc accatcctgt attccggcga tggcggctgg
     4201 gccgatctcg acaagcagct cggcaatgcc ttcgtcgcgc gcggcattcc cgtcgtcggc
     4261 atcaacgcgt tcaagtattt ctggcgcaac cggccgcccg atgtggctgc cgccgagctt
     4321 gatgcgctga tgacgaagta cctcgacgcc tggcacaagc ggcgcgtgtg gctggtcggt
     4381 ttctcgttcg gcgccgacgt gctgcccacg ctgatcgaca agctcagcct gcagaaccgc
     4441 gcgcgcatcg cgcagctggt gctgctttcg cccagccgcg acgccagctt cgagatccag
     4501 ttcgagggct acatgatggc gcagggacgc atcaaggcct tcgtcaagac gctgctggag
     4561 aagttcaaca aggtgccgca ctacgatgcg cttccgccgg tggtcgccat caaccatgcg
     4621 ttcccggtgg tctgctacta cggcaggcaa gaggccgacg acagcctgtg caccgacccc
     4681 gggctgccgg cgtgggtgac ggtccacgcg aagaacggcg accatcattt cgaaggcggc
     4741 taccagccgc tggccgcgca gatgatcaat gaactgccgc ggcaggcggc gacgccgtag
     4801 ggtggattca tccgcggtcc cggcttcttt gtcgggcttc atcccgacaa cggccccacg
     4861 ccgccagcag gatcgagccc gcgcggccgc cccgtacaat gcgcgcatgt ccattgcttg
     4921 cctgatgtcg ccgtgaccgc caccggcccg gcctccgtcg acgacgccgc gctcgcggcc
     4981 ttgttcgtgc cgttcctggg tggcgacctg ccgtcgccgg gtgatcgcgt gctgtttctg
     5041 cgtgcgcggc tcggcgccgt cgtgcgcgag tgggcgcggc cggcatggtg ctgcgtgcag
     5101 agcttcctgc cgtttgccga cgcgctgggt gatgcgggct tggccaccgc gcccgtcgcg
     5161 cccgctgcgc gctttccgtg cgtgctgctg ctcccgccgc gccagcgcga cgagcggcgc
     5221 gcgctgttcg cgcaggcggt ggaccacctc gaagcaggcg gcgtactcgt cgcgagtgtc
     5281 gccaatgccg a
//
LOCUS       DASSVL010000080         2744 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_538532, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000080 DASSVL010000000
VERSION     DASSVL010000080.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2744)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2744)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2744
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_538532"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..494
                     /locus_tag="VFM52_01345"
     CDS             <1..494
                     /locus_tag="VFM52_01345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007081649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0016653 - oxidoreductase activity, acting
                     on NAD(P)H, heme protein as acceptor [Evidence IEA];
                     GO_process: GO:0006784 - heme A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="COX15/CtaA family protein"
                     /protein_id="HET8763842.1"
                     /translation="VVGVVLLACQIFLGGWTSSNYAALACGIGGSAFPTCLGQGWPAM
                     DFHQGFILWRGIGVDFQGGILDAAARTAIQMVHRLGAVVVFVYVLWLAHKAGRAGLRG
                     HAIALALLLLLQVALGISNVVLGLPLVIAVAHTGGAALLLFALVTLLARTRGIARQPA
                     QPG"
     gene            698..1618
                     /gene="cyoE"
                     /locus_tag="VFM52_01350"
     CDS             698..1618
                     /gene="cyoE"
                     /locus_tag="VFM52_01350"
                     /EC_number="2.5.1.141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018971794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008495 - protoheme IX farnesyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006783 - heme biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heme o synthase"
                     /protein_id="HET8763843.1"
                     /translation="MSTLAGQYLAATKPRIVALLVFTAVIGMLLAAPGVPPWRALVFG
                     TLGIWMASSSAAALNQLIDQRIDRVMARTAHRPLVTGTLTARQVLTFATLLGAASMLV
                     LGLLVNWLTALLTFIGLIGYAVIYTAFLKRATPQNIVIGGLAGAIPPLLGWAAVTGMQ
                     APSDWAYGLLLVLIVFVWTPPHFWSLAIFRREDYRRACIPMLPVVYGVEYTRWHVLFY
                     TVLLVLVSLLPYLTGMSGLLYLGGAAVLGIAYLYYAIRLMRPPDERFAMSAFGYSIVY
                     LIALFSFLLADHWLAAPVVRVGGYVLQRIG"
     gene            1703..>2744
                     /locus_tag="VFM52_01355"
     CDS             1703..>2744
                     /locus_tag="VFM52_01355"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HET8763844.1"
                     /translation="MVLLVVAIVAALISIALAAWALRKQRRALKELTTSRERYILLAE
                     CANDGTWEFDVAARRFDFSRRLYKLLGYEEGTLNTPEDMQRVIAPEDYPRSREEIYAH
                     MQARRTDELQRVMRMRTQDGRVLTVLARSVVQYADDGTPVRVLGSYTDITKRLRDERQ
                     LQIAASVFDAGSDGILISDALQRIVSVNSAFMRVTGYQREELTGRPVRDMQIPSAATR
                     ACDHALRESDKWSGEIAWRRRNGEGKALDSSVVAVRDSSGEVAFHIHVCIDTAELRYA
                     QARIRHLAYFDSLTGLPNRTHLRGQFAQALAAARHGARPLAVAFFDLDNFTEINDTAG
                     HSVGDDVICTVAQ"
BASE COUNT          383 a          907 c          965 g          489 t
ORIGIN      
        1 ccgtggtcgg cgtggtcctg ctggcgtgcc agatcttcct cggcggctgg acgtcgtcca
       61 actacgcggc actggcctgc gggatcggcg gctcggcgtt cccgacctgt ctcggtcagg
      121 ggtggccggc gatggatttc caccagggct tcatcctgtg gcgcggcatc ggcgtggatt
      181 tccagggcgg catcctggat gccgctgcgc gcaccgcgat ccagatggtg caccgcctcg
      241 gtgcggtggt ggtgttcgtg tacgtgctgt ggctggcgca caaggccggc cgcgcgggcc
      301 tgcgtgggca tgcgatcgca cttgcactgc tgctgttgtt gcaggtcgcg ctgggcatca
      361 gcaacgtggt gctgggcctg ccgctggtga tcgcggtggc gcatacggga ggcgcggcgc
      421 tgcttttgtt cgcactggtg accctgctcg cacgtacgcg gggaatcgca aggcaacccg
      481 cgcagccagg gtgaagcgag gcgactgcgt ttgcaggact gcaaacgcga atggcgcagc
      541 cggcccaggg ggagagcggc agggatgccg cgaatcaatc cgggacatgg cgcatcaggc
      601 ttcccggttc gcgccgctgc gtggctgcat ccggccgtgc gctggtgctt gtccccaatt
      661 cccgatcccc agtccccagt cccgataaaa tagtccgatg tccacgctcg ccggccagta
      721 tctcgccgcc accaagccgc gcatcgtcgc gttgctggtg ttcaccgccg tcatcggcat
      781 gctgctcgcc gcccccgggg tgccgccgtg gcgggcgctg gtgttcggca cgctcggcat
      841 ctggatggcg tcgtcatcgg ccgcggcgct gaaccagttg atcgaccagc gcatcgaccg
      901 ggtgatggcg cgcaccgcgc atcgtccgct ggtcacgggc acgctcaccg cgcgccaggt
      961 gctgacgttt gcgacgctgc tgggcgcggc gtcgatgctg gtcctcggcc ttctggtgaa
     1021 ctggctgacc gcgctgctca ccttcatcgg cctgatcggc tacgcggtga tctacacggc
     1081 gttcctgaaa cgcgcgacgc cgcagaacat cgtgatcggc gggttggccg gcgcgatccc
     1141 gccgctgctc ggctgggccg cggtcaccgg gatgcaggcg cccagcgatt gggcctacgg
     1201 cctgctgctg gtgctgatcg tgttcgtgtg gacgccgccg cacttctggt cgctggcgat
     1261 cttccggcgc gaggattaca ggcgtgcctg catcccgatg ctgccggtcg tctacggtgt
     1321 cgagtacacc cgctggcacg tgttgttcta cacggtgctg ctggtgctgg tgagcctgct
     1381 gccgtacctc accggcatga gcggactgct gtacctgggc ggcgcggcgg tgctcggcat
     1441 cgcctacctg tactacgcga tccggctgat gcgtccaccg gacgagcgct tcgcgatgag
     1501 cgcgttcggc tattccatcg tttacctgat cgccctgttc agtttcctgc tggccgacca
     1561 ctggctggcc gcgccggtgg tgcgggtggg cgggtacgtc ctgcaacgga tcgggtaagc
     1621 tggcgccggc gcaggcaggg gccggcgcgg tggtgtatcg ggagccaggg ctccccggcc
     1681 gggaggttgg ctgcgcttga acgtggtcct gctggtggtg gcgatcgtcg ccgcgctgat
     1741 cagcatcgcg ctggcggcgt gggcgctgcg caagcagcgc cgggccctga aggaactgac
     1801 gaccagccgc gagcgctaca tactgctcgc cgagtgcgcc aacgacggca cctgggagtt
     1861 cgacgtcgcg gcgcggcgtt tcgatttctc gcggcggctg tacaagctgc tcggctacga
     1921 agaagggacg ctgaacacgc ccgaggacat gcagcgcgtc attgcgcccg aggattatcc
     1981 gcgttcgcgc gaagaaatct acgcacacat gcaggcgcgc cgcaccgatg aattgcagcg
     2041 tgtcatgcgc atgcgcaccc aggacggccg ggtactgacg gtgctcgcgc gcagcgtggt
     2101 ccagtacgcc gacgacggca cgccggtgcg ggtgctgggt tcgtacaccg acatcaccaa
     2161 gcgcctgcgc gacgagcgcc agctgcagat cgcggccagc gtgttcgatg ccggcagcga
     2221 cggcatcctc atcagcgacg cgctccagcg catcgtgtcg gtgaacagcg ccttcatgcg
     2281 cgtgaccggc taccagcgcg aggaactgac cgggcgcccg gtacgcgaca tgcagatccc
     2341 gtccgccgcg acgcgcgcct gcgaccatgc gttgcgcgaa tccgacaagt ggagcggcga
     2401 aatcgcctgg cgccgccgca acggcgaggg aaaggcactc gacagttcgg tggtcgcggt
     2461 gcgcgactcg tccggcgagg tcgcgttcca catccacgtt tgcatcgata ccgccgaact
     2521 gcgttacgcg caggcgcgca tccgtcatct ggcctatttc gattcactga ccggactgcc
     2581 caaccgcacc cacctgcgcg gccagttcgc gcaggcgctg gcggcggcgc ggcatggcgc
     2641 gcggccgctg gcggtcgcgt ttttcgatct cgacaatttc acggagatca acgacaccgc
     2701 cggccacagc gtcggcgacg acgtgatctg cacggtggcg cagc
//
LOCUS       DASSVL010000081         2010 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_128830, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000081 DASSVL010000000
VERSION     DASSVL010000081.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2010)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2010)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2010
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_128830"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..329)
                     /locus_tag="VFM52_01360"
     CDS             complement(<1..329)
                     /locus_tag="VFM52_01360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HET8763845.1"
                     /translation="MNDASWQAWADRLATAVASLDRDLRVRWQNDALAELLGSGTRSA
                     LGQPLALWLCDPAALAQVARACAEAGALQLREVTLLTFDERRLAADLAVQPDGEGGAL
                     LEVHALA"
     gene            complement(416..1825)
                     /gene="glnA"
                     /locus_tag="VFM52_01365"
     CDS             complement(416..1825)
                     /gene="glnA"
                     /locus_tag="VFM52_01365"
                     /EC_number="6.3.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008438800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004356 - glutamine synthetase activity
                     [Evidence IEA];
                     GO_process: GO:0006542 - glutamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I glutamate--ammonia ligase"
                     /protein_id="HET8763846.1"
                     /translation="MSANKVLDLIQEHEVEFVDFRFADMLGVHHHVTFPAHAIDESTF
                     EDGKMFDGSSITGWKGINESDMILLPDPDTAHLDPFSSHTQLILHCDVLEPSTMQAYG
                     RDPRSIAKRGEAFLKSTGIADTAFFGPEPEFFIFDSVRWQNDMGRVFYEIGSEEAAWS
                     SRYKYDGENHGHRPGVKGGYFPVSPVDSLGDLRADMCKVLESLGQKVEVHHHEVANAG
                     QCEIGVKFNTLVKKADELMTMKYVIKNVAHQNGKTVTFMPKPLVGDNGSGMHVHQSLA
                     KNGENLFAGDLYGGLSQTALWYIGGIFKHARAINAFANSTTNSYKRLVPGFEAPVMLA
                     YSARNRSASCRIPYVASPKGRRIEVRFPDPMNSGYLVFTALMMAGLDGILNKIDPGAP
                     ADKDLYDLPPEEEKNIPQVCSSLDQALEALDKDRDFLKAGGVFTDDFIDAYIGVKMQE
                     VTRYRASTHPIEFQMYYAL"
BASE COUNT          313 a          651 c          687 g          359 t
ORIGIN      
        1 tcggccagcg cgtgcacttc cagcagcgcc ccgccctcgc cgtcgggctg gacggccagg
       61 tcggccgcga ggcggcgttc gtcgaaggtc agcagggtca cctcgcgcag ttgcagggcg
      121 ccggcctcgg cgcatgcccg ggccacctgc gcgagcgccg ccggatcgca cagccacagg
      181 gccagcggct ggcccagcgc gctgcgggtg ccgctgccca gcagctccgc cagcgcatcg
      241 ttctgccagc gcacgcgcag gtcgcggtcg aggctggcca ccgccgtggc cagccgatcc
      301 gcccatgcct gccaggacgc gtcgttcatc gcaccatcat ggccgttgca ccccgatggt
      361 gcaacggccc gccaggaacc cgcttttccg aattccccat ggcggcggcc cggacttaca
      421 gcgcgtagta catctggaac tcgatcgggt gcgtcgaggc gcggtagcgg gtgacttcct
      481 gcatcttcac gccgatgtag gcgtcgatga agtcgtcggt gaacaccccg ccggccttga
      541 ggaagtcgcg atccttgtcc agcgcttcca gcgcctggtc gaggctggag cacacctgcg
      601 ggatgttctt ctcctcttcc ggcggcaggt cgtagagatc cttgtcggcc ggcgcgcccg
      661 ggtcgatctt gttcaggatg ccgtccaggc ccgccatcat cagcgcggtg aacaccaggt
      721 agccggagtt catcgggtcg gggaagcgca cctcgatgcg gcggcccttc gggctggcca
      781 cgtaggggat gcggcagctc gccgagcggt tgcgcgccga gtaggccagc atcaccggcg
      841 cctcgaaacc cggcaccagg cgcttgtagc tgttggtggt ggagttggcg aacgcgttga
      901 tcgcgcgggc gtgcttgaag atgccgccga tgtaccacag cgcggtctgg ctcaggccgc
      961 cgtagagatc gccggcgaac aggttctcgc cgttcttggc cagcgactgg tgcacgtgca
     1021 tgccgctgcc gttgtcgccg accagcggct tgggcatgaa ggtgacggtc ttgccgttct
     1081 ggtgcgccac gttcttgatg acgtacttca tcgtcatcag ctcgtcggcc ttcttcacca
     1141 gcgtgttgaa cttgacgccg atctcgcact ggccggcgtt cgccacttcg tggtggtgca
     1201 cctcgacctt ctgccccagc gattcgagca ccttgcacat gtccgcgcgc aggtcgccca
     1261 gcgagtcgac agggctgacc gggaagtagc cgcccttcac gccggggcgg tggccgtggt
     1321 tctcgccgtc gtacttgtag cgcgaggacc acgccgcctc ttccgaaccg atctcgtaga
     1381 acacgcggcc catgtcgttc tgccagcgca ccgagtcgaa gatgaagaac tccggctccg
     1441 gcccgaagaa ggcggtgtcg gcgatgccgg tggacttgag gaacgcctcg ccgcgcttgg
     1501 cgatcgaacg cgggtcgcgg ccgtaggcct gcatggtcga cggttccagc acgtcgcaat
     1561 gcaggatcag ctgggtgtgc gagctgaacg ggtcgaggtg ggcggtgtcc gggtcgggca
     1621 gcaggatcat gtccgactcg ttgatgccct tccagccggt gatcgaggag ccgtcgaaca
     1681 tcttgccgtc ctcgaaggtc gactcgtcga tcgcatgggc cgggaaggtg acgtggtggt
     1741 gcacgccgag catgtcggcg aaacggaagt cgacgaactc gacctcgtgt tcctggatca
     1801 ggtcgagcac tttgttggcg gacatggaac aacctcggcg atgatggtga gctggcttca
     1861 gcaaggccca tgccaatggg cgcagccatg gtgcggcaag ggccggcaga cattccgctt
     1921 gccccggggg cagtcaggaa gaaacatgct ggtgcaacgt ggatttcacg ttgcaccagc
     1981 atgagtcatt caagcaggcc gcgcgaggcc
//
LOCUS       DASSVL010000082         2346 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_792767, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000082 DASSVL010000000
VERSION     DASSVL010000082.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2346)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2346)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2346
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_792767"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(106..468)
                     /gene="rnpB"
                     /locus_tag="VFM52_01370"
     ncRNA           complement(106..468)
                     /ncRNA_class="RNase_P_RNA"
                     /gene="rnpB"
                     /locus_tag="VFM52_01370"
                     /product="RNase P RNA component class A"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00010"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00010"
     gene            complement(519..1346)
                     /gene="rsmI"
                     /locus_tag="VFM52_01375"
     CDS             complement(519..1346)
                     /gene="rsmI"
                     /locus_tag="VFM52_01375"
                     /EC_number="2.1.1.198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015448711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008649 - rRNA methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0000451 - rRNA 2'-O-methylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (cytidine(1402)-2'-O)-methyltransferase"
                     /protein_id="HET8763847.1"
                     /translation="MSAVQPGCLWVVATPIGNRDDFSLRAIATLRAVAVIAAEDTRHS
                     RPLLAHHGIDTPLVALHEYNEREAVAALVRRLAGGESVALISDAGTPLVSDPGFRLVR
                     AARAAGIRCAPVPGACAAISALSVAGLPSDRFVFEGFLPPKSAARRARLMELAGESRT
                     LIFYESSHRIAESLADLRDVFGGEREAVLARELTKVFETVLGEPLATLAARVAADPDQ
                     QRGECVILVAGRGEEADAKLAEGRRVFALLREELPPAKAAKLAAAISGAPRKALYES"
     gene            1416..>2346
                     /locus_tag="VFM52_01380"
     CDS             1416..>2346
                     /locus_tag="VFM52_01380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015448712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein activator"
                     /protein_id="HET8763848.1"
                     /translation="MRPSSVIRPVILLLTCLLVLTACSLGNTKASPEELAAAQSAATL
                     ARQGNLDQAAQAYLALADRYGGNADHYRVLAAEAWREGGRIEATAPVLARIRRDRLGG
                     SDPVRFDLLRAELALHDHDAATALRLTTQPTVAVPDDLQLRLYELRARALTATGDRWG
                     AARTRTEMDSRLHGLDRAQNRKEVLRELTALGVGPLKQRAAAMQPGDRMLPWINQALQ
                     QLGVAVAQPQPTLGQPVGTLLPGTGADVREGYQMPAHVALLLPESGTYAGASEAIREG
                     FFAAYAEAAHTRAPRASVRIYDTSGTNAGAVSAY"
BASE COUNT          328 a          892 c          807 g          319 t
ORIGIN      
        1 gcggaagcag ctcggcatga accgccgttc acttcgcaca tgcgccgccg catgcgcgtc
       61 cacggccagc ccggcgcacg cgcgtgcgcc gggctggcat gggaaaggtg gagtcggcct
      121 gtaagccggg ttctgtacgc cttgcggcgc gacagtcatt cctctcggcc aggcgtcgcc
      181 gcctggctcc agcaacctac ccggggacga cgcgggccgc gccaatgtcc ccctatttgg
      241 tcttgctccg agtggggttt accgtgccgt acgacgttgg ccccgtacgc ggtgcgctct
      301 taccgcaccc tttcaccctt gcctgtgccc ttgcgggcca tcggcggtct gctctctgtt
      361 gcactggccg tcggctcacg ccgcccaggt gttacctggc actctgccct gtggagcccg
      421 gactttcctc gatgcgctcg cgcgcgacgc gactgtccgg ccgactccgg cagtcattgt
      481 aatggccggg gctcgaaaaa gcgcgccgcc acatcgcgtc acgattcata caacgccttg
      541 cgcggcgcgc cgctgatcgc cgcggcaagc ttggccgcct tcgccggcgg cagttcctcg
      601 cgcaggaggg cgaacacgcg ccgcccctcg gcgagcttcg cgtcggcctc ctcgccgcgg
      661 ccggcgacca ggatcacgca ctcgccgcgc tgctggtccg ggtcggcggc gacgcgcgcg
      721 gcaagggtgg cgagcggttc gccgagcacg gtctcgaaca ccttggtcag ctcgcgggca
      781 agcaccgcct cgcgctcgcc gccgaacacg tcgcgcaggt cggcgaggct ctcggcgatg
      841 cggtgcgagg actcgtagaa gatcagcgtg cgcgactcgc cggccagctc catgaggcgc
      901 gcgcggcgcg cggcggattt cggcggcagg aaaccctcga acacgaagcg gtcgctgggc
      961 aggccggcca ccgacagcgc gctgatcgcc gcgcacgcgc ccggcaccgg cgcgcagcgg
     1021 atgccggcgg cgcgcgccgc acgcaccagg cggaacccgg ggtcggaaac cagcggcgtg
     1081 ccggcgtccg agatcagcgc caccgattcg ccgccggcga gccgccgcac cagcgccgcc
     1141 accgcctcgc gttcgttgta ttcatgcagc gcgaccagcg gcgtgtcgat gccgtggtgc
     1201 gccagcagcg gccggctgtg gcgggtgtcc tcggcggcga tcaccgccac cgcgcgcagg
     1261 gtggcgatcg cacgcaggga gaaatcgtca cggttgccga tcggcgtggc aacgacccac
     1321 aggcaaccgg gctggacagc ggacatgcac gagctcccga aatcgatccg ctatcatcgc
     1381 ccattcgtcg cccatgccga gcaagaggcc cttcgatgcg cccgtcttcc gtgatccggc
     1441 cggtgattct gctgctgacc tgcctgctgg tgctcaccgc gtgctcgctc ggcaacacca
     1501 aagcctcgcc ggaggagctg gccgccgcgc agagcgccgc aacactggcc cgccaaggca
     1561 acctggacca ggccgcgcag gcctacctcg cgctggccga ccgctacggc ggcaacgccg
     1621 accactaccg cgtgctggct gccgaggcgt ggcgcgaggg cggccgcatc gaggccacgg
     1681 cgccggtgct ggcgaggatc cgccgcgacc ggcttggcgg cagcgacccg gtgcgcttcg
     1741 acctgctgcg cgccgagctc gcgctgcacg accacgacgc cgctaccgcc ctgcggctga
     1801 cgacccagcc cacggtcgcg gtgcccgacg acctgcaact gcggctgtac gagttgcgcg
     1861 cccgcgcgct caccgccacc ggcgaccgct ggggcgcggc gcgcacgcgc accgagatgg
     1921 actcgcgcct gcacggcctc gaccgcgcgc agaaccgcaa ggaagtgctg cgtgagctga
     1981 ccgcgctcgg cgtcggcccg ctcaagcagc gcgccgccgc catgcagccg ggcgatcgca
     2041 tgctgccgtg gatcaaccag gcgctgcagc agctgggggt tgccgtcgcg cagccgcagc
     2101 ccacgctcgg ccagccggtc ggcaccttgc tgccgggcac cggcgccgac gtgcgcgagg
     2161 gctaccagat gccggcccac gtggccttgc tgctgcccga aagcggcacc tacgccggcg
     2221 ccagcgaggc gatccgcgaa ggcttcttcg cggcctatgc cgaggcggca catacccgcg
     2281 ccccgcgtgc gtcggtgcgc atctacgaca catcgggcac caatgccggc gccgtcagtg
     2341 cctacc
//
LOCUS       DASSVL010000083         2871 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_665801, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000083 DASSVL010000000
VERSION     DASSVL010000083.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2871)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2871)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2871
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_665801"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..900
                     /locus_tag="VFM52_01385"
     CDS             <1..900
                     /locus_tag="VFM52_01385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8763849.1"
                     /translation="ERAALMPALRTTAENLALFALGALGAGILILAPYLSHWSDLWNQ
                     VVAFHIAAGHTSGHGLLYNLSLLLSNGLAYPLALAALVGFLLGIGARDWRIAPPLLWL
                     GASALLLLDQQPLFDHHRVLLSPPLALLAALALPLAARQAPVALRRGASLPIAPLAAT
                     LLLVVTLLTLGLGVASMRTDAAPPNGDQAQAAVALERLTVPGDVVASDDQYAAALAGR
                     DVPPELVDTSQVRIASGYLTAAQLEAILTRDDVRAILFSSGRFALIPGFTAWVQAHYT
                     EVVDLGGGRGLYIKSPPQPVTRV"
     gene            1187..1603
                     /locus_tag="VFM52_01390"
     CDS             1187..1603
                     /locus_tag="VFM52_01390"
                     /inference="COORDINATES: protein motif:HMM:NF033788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HET8763850.1"
                     /translation="MDDSSSTDHDYLELKRTLRALGDVVRLHIVHVLGGCAEITVTDL
                     ALMLAGDGRPVSQPLVSWHLAMLRRAGLVRTRRVGRLVYCSLDRERYQACLRRLGELV
                     AAAGSAEAPVPSAAPIAPSAPAAPASTAADTTRSLR"
     gene            1648..2823
                     /locus_tag="VFM52_01395"
     CDS             1648..2823
                     /locus_tag="VFM52_01395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018287644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inositol-3-phosphate synthase"
                     /protein_id="HET8763851.1"
                     /translation="MGKNKVRVGIIGVGNCASSLVQGVEFYKNAAENDFIPGLMHVNL
                     GGYHINDIEFSAAIDIDADKVGKDLSEAIFAGQNNTYKFASVPTKGVQVVRGMTHDGL
                     GKYLSQVITKAPGSTADIVKVLKDTGTDIVINYLPVGSETATKWYVEQVLQAGCGFVN
                     CIPVFIGREQYWRNRFEEAGLPIIGDDIKSQVGATIVHRTLARLFRDRGVKLERTYQL
                     NVGGNTDFYNMLERERLESKKISKTNAVTSQLDYDLGSDNVHVGPSDYVPWLTDRKFA
                     FIRLEGRTFGDVPLNLELKLEVWDSPNSAGVVIDALRCAMLAKNNGISGELLGPSAYF
                     MKSPAIQYTDEQARLMTEEFITEFTQDAKATAESATRAHANGHSETPVAVQDMPEAQ"
BASE COUNT          458 a         1040 c          918 g          455 t
ORIGIN      
        1 gagcgcgctg ccctgatgcc ggcgctgcgc acgaccgccg agaatctcgc gctcttcgcg
       61 ctcggcgccc tcggcgccgg catcctgatc ctcgcgccct acctgtcgca ttggagcgac
      121 ctgtggaatc aggtcgtcgc cttccacatc gccgccgggc acacctccgg tcacggcctg
      181 ctctacaacc tgtcactgct gctgagcaac ggcctcgcat atccgctggc actggcggcg
      241 ctggttgggt tcctcctggg gatcggcgcg cgcgactggc gcatcgcgcc gccgctgctg
      301 tggctgggcg cctcggcgct gctgctgctc gaccagcagc cgctcttcga ccaccatcgc
      361 gtgctgctct cgccgccgct ggcgctgctc gccgcgctgg cgctgcccct ggccgcgcgc
      421 caggcgcccg tcgccctccg gcgtggcgcc agcctgccga tcgcgcctct tgcggcaacg
      481 ctgctgctcg tggtgacgct gctcacgctc ggcctgggcg tcgccagcat gcgtactgat
      541 gccgcgcccc cgaacggcga tcaggcgcag gccgcggtcg cgctggagcg cctgaccgtg
      601 ccgggcgacg tggtggcgag cgacgaccag tacgccgcgg cgctcgccgg gcgcgacgtg
      661 ccgccggagc tggtggacac ctcgcaggtg cgcatcgcca gcggctacct caccgccgcg
      721 cagctcgaag cgatcctcac ccgcgacgac gtgcgcgcga tcctcttctc cagtggccgc
      781 ttcgccctga tccctggctt caccgcctgg gtccaggccc actacaccga ggtggtggac
      841 cttggcggcg gccgcggcct ctacatcaag tcgccgccgc agcccgtcac tcgcgtctag
      901 accgcgcacc cgccatcctc cagtccgccc atcgcggact tcgcggccgg gaggccctcc
      961 aggcgcgatt tcattcgccg gctacctcgg cgtggatttc acccgccggt cacctcgacc
     1021 cttgacaaag gccgtcctct caggtacaac catacgtgga cgcataagcc gtcctttata
     1081 tagcgaaagt acatatagcc gtccttgatg tatgcccact gtcgcgattg gcgcaggggc
     1141 gcgcggtatg cgcccgcggg gacggcgcga gagggagcga gatcgcgtgg acgacagcag
     1201 cagcaccgat cacgactacc tcgagctcaa gcgcacgctg cgcgcgctgg gcgatgtggt
     1261 gcggctccac atcgtgcatg tgctcggcgg ctgcgccgag attaccgtca ccgacctggc
     1321 gctgatgctc gccggcgacg gccggcctgt cagccagccg ctggtctcgt ggcacctggc
     1381 gatgttgcgc cgcgcgggcc tcgtgcgcac gcggcgcgtg ggccggctgg tctactgctc
     1441 gctcgaccgc gagcgctatc aggcctgcct acgacggctg ggcgagctgg tcgctgccgc
     1501 ggggagcgcg gaggcgcccg tcccgtcggc cgctcccatc gccccgtccg cgccggcggc
     1561 gccagcgtcc accgcggcag acacgacgcg atcgctgcgc tagccttcac gtacgggcac
     1621 accgcagagt ttccgaggag gaagggtttg ggcaagaaca aagtgcgcgt ggggatcatc
     1681 ggcgtgggca actgcgcctc gtccctcgtc cagggcgtcg agttctacaa gaacgccgcg
     1741 gagaatgact tcatcccagg gctgatgcac gtcaacctcg gcggctacca catcaacgac
     1801 atcgagttct ccgccgcgat cgacattgac gccgacaagg tgggcaagga cctcagcgag
     1861 gcgatcttcg ccggccagaa caacacctac aagttcgcca gcgtgcccac caagggcgtc
     1921 caggtcgtgc gcggcatgac acacgacggc ctgggcaagt acctctcgca ggtgatcacc
     1981 aaggcccccg gctcgaccgc cgatatcgtc aaggtgctca aagacaccgg caccgatatc
     2041 gtcatcaact acctgccggt cggcagcgag acggccacca agtggtacgt ggagcaggtg
     2101 ctgcaagccg gctgcggctt cgtcaactgc atcccggtct tcatcggccg cgagcagtac
     2161 tggcgcaacc gcttcgaaga ggccggcctg ccgatcatcg gcgacgacat caagagccag
     2221 gtcggcgcca ccatcgtcca ccgcacgctg gcgcggctct tccgcgaccg cggcgtcaag
     2281 ctcgagcgca cctaccagct caacgtcggc ggcaacaccg acttctataa catgctggag
     2341 cgcgagcggc tggagtcgaa gaagatctcc aagaccaatg ccgtcaccag ccagctcgac
     2401 tacgacctgg gcagcgacaa cgtccacgtc ggccccagcg actacgtgcc ctggctcacc
     2461 gaccgcaagt tcgccttcat ccgcctggag gggcgcacct tcggcgatgt gccgctgaat
     2521 ctggagctga agctggaggt ctgggactcg cccaactccg ctggcgtggt gatcgacgcg
     2581 ctgcgctgcg ccatgctcgc caagaacaat ggcatctctg gggagctgct ggggccgagc
     2641 gcctacttca tgaagtcgcc cgccatccag tacaccgacg agcaggcgcg gctgatgacc
     2701 gaagagttca tcaccgagtt cacccaggac gccaaagcca cggcggagag cgcgacgcgc
     2761 gcgcacgcta atggccacag cgagacgccc gtcgcggtgc aggatatgcc cgaggcgcag
     2821 tagtcatgca gtagtcatat agtggtcacg ttcccgttgc cttcgcgtgg c
//
LOCUS       DASSVL010000084         4856 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1216662,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000084 DASSVL010000000
VERSION     DASSVL010000084.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 4856)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4856)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4856
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1216662"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..289)
                     /locus_tag="VFM52_01400"
     CDS             complement(<1..289)
                     /locus_tag="VFM52_01400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017462873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylglutaryl-CoA lyase"
                     /protein_id="HET8763852.1"
                     /translation="MTRSDTFVRIVEVGARDGLQNEKTLLPTPTKIALIDRLSATGLR
                     TIEATSFVSPKWVPQLADAAEVLAGIRKVPGVSYPVLVPNLQGYRRARDVGA"
     gene            complement(439..2427)
                     /locus_tag="VFM52_01405"
     CDS             complement(439..2427)
                     /locus_tag="VFM52_01405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007804831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl/propionyl/methylcrotonyl-CoA carboxylase
                     subunit alpha"
                     /protein_id="HET8763853.1"
                     /translation="MFERVLIANRGEIACRVMRTCRRLGIHSIAVYSEADRNAQHVRL
                     ADEAWPIGSSAPSESYLRIDAILAAAKQSGAQAIHPGYGFLSENTAFSRACKDAGIVF
                     IGPDPESIEAMGSKAAAKHLMAKHAVPLVPGYDGDNQDNAYLAERAHEVGYPLIIKPS
                     AGGGGKGMQIVRSDAEFPEALATAQRVAKAAFGDASMLLERYVEHPRHIEFQIFGDRH
                     GHVIHLGERECSAQRRYQKVLEETPSPFLTPARRKAMGEAAVAAARAVNYVGAGTVEF
                     IVGQAGDFHFMEMNTRLQVEHPVTELTHGVDLVEWQLRVANGEPLPLTQDGVVSRGHA
                     VEARLYAEDPEQNFLPGSGRLHTLRLPEPSGHVRIDGGVAEGDTVTIFYDPMIAKLIV
                     WDEDRPRALTRMRQALAECEVEGPKSNIAFLERLVRHPAVVEARIDSGYLDRHLDEFV
                     AGQHEPDTRTLFAAATAALLSDEATPDVAPTDPHSPWAASDGWRIGRNGKRVIALARG
                     EARFEIEAWGHAGDYTLKLGEAGCEVRGALLGDGTLGARFDGEAERFALRADARRVLL
                     HDAGNQRWHLDRVPAYAWHVEDAAGGNQVLAPMPGRIVLVKATAGDTVEKGQELLVME
                     AMKMELALKAPRAGTVESISAAQGDFVDADTVLVRFAE"
     gene            complement(2519..2884)
                     /locus_tag="VFM52_01410"
     CDS             complement(2519..2884)
                     /locus_tag="VFM52_01410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8763854.1"
                     /translation="MTSGRARPVIHLADVVVQSATDTPIHAGVPQGAAVGRYDLRWGE
                     IACPAGRPETAHQIVNTGTTEMRYLAISAIAPAEICECPDSGKFGAFVDNAPDVSNVP
                     ARFRCIGRTVDTRDYREGE"
     gene            complement(2881..3672)
                     /locus_tag="VFM52_01415"
     CDS             complement(2881..3672)
                     /locus_tag="VFM52_01415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017462875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HET8763855.1"
                     /translation="MSTSIVITNQGGVRTLTMDRPKVHNAFDDTLIAELTAALLAADA
                     DPAVRLVVLTGNGSCFSAGADLNWMRGMVAASEAENRADAQRLAHLLRTLQFLSKPTI
                     ARVNGAAYGGGVGLVACCDVAVGVEGSKFALSEVKLGLVPATISPYVVAAIGLRHARR
                     LFISGEVFDAAEAQRIGLLHAVVGADALDAAIDRQLHFLGKAGPIAQREAKALALRIA
                     GCDAAGAERIDTENAELIARLRVSPEGQHGLGAFLDTRAPSWVAG"
     gene            complement(3687..4856)
                     /locus_tag="VFM52_01420"
                     /pseudo
     CDS             complement(3687..4856)
                     /locus_tag="VFM52_01420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017462884.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="carboxyl transferase domain-containing protein"
BASE COUNT          725 a         1672 c         1677 g          782 t
ORIGIN      
        1 tggcgcccac gtcgcgcgcg cgccggtagc cctgcaggtt cggcaccagc accgggtagc
       61 tcacgccagg caccttgcgg atgccggcga gcacctcggc cgcgtcggcc agctgcggca
      121 cccacttcgg gctgacgaag ctcgtcgctt cgatggtcct gagaccggtc gccgacaggc
      181 gatcgatcaa cgcgatcttc gtcggcgtcg gcagcaacgt cttttcgttc tgcaaaccgt
      241 cgcgcgcgcc gacttcgacg atgcgcacga atgtatcgga cctggtcatg gcaactccgg
      301 caaaaggatc aaggccgcat ccccccggac gcggcgacaa cctggcatat caatgacccg
      361 gatgcagccc ggatcatggc gcgcgcatca tggcggacgc gtgagtgggc gatgcggcga
      421 gacacgacgg cgccgccgtc attcggcgaa gcgcaccagc accgtgtcgg cgtcgacgaa
      481 gtcgccttgc gcggcactga tgctttcgac cgtgccggcg cgcggcgcct tcagcgcgag
      541 ctccatcttc atcgcttcca tcaccagcag ctcctggccc ttttcgacgg tgtcgccggc
      601 cgtggccttg accagcacga tgcggcccgg catcggcgcc agtacctggt tgccgccggc
      661 ggcgtcctcg acgtgccatg cgtaggccgg tacccggtcg aggtgccagc gctggttgcc
      721 cgcgtcgtgc agcagcaccc gccgcgcatc cgcgcgcaac gcgaaacgct cggcctcacc
      781 gtcgaaacgc gcgccgagcg tgccgtcgcc gagcagcgcg ccacgtactt cgcagccggc
      841 ctcgcccagc ttcagcgtgt agtcgccggc atggccccac gcctcgattt cgaaccgcgc
      901 ctcgccgcgc gccagcgcga tcacgcgttt gccgttgcgg ccgatgcgcc agccatcgct
      961 ggcagcccac ggcgaatgcg ggtcggtggg tgccacgtcg ggcgtcgcct cgtcactcag
     1021 caaggccgcg gtcgcggcgg caaacagcgt gcgcgtgtcc ggctcgtgct ggccggccac
     1081 gaattcgtcg aggtggcgat cgaggtagcc gctgtcgatg cgggcttcca ccactgccgg
     1141 gtgacgcacc aggcgttcca ggaacgcgat gttcgacttc ggcccttcga cctcgcactc
     1201 ggccagcgcc tggcgcatgc gggtgagcgc acgcgggcgg tcctcgtccc acacgatcag
     1261 cttggcgatc atcgggtcgt agaagatcgt caccgtgtcg ccctcggcga cgccgccgtc
     1321 gatgcgcacg tggcccgagg gctccggcag gcgaagcgtg tgcagcctgc cggaaccggg
     1381 caggaagttc tgctccggat cctcggcata aaggcgcgct tcgaccgcgt gaccgcggga
     1441 aaccacgcca tcctgggtga gcggcagcgg ctcgccattg gcgacgcgca actgccattc
     1501 gacgagatcg acgccgtggg tcagttcggt gaccgggtgc tcgacctgca ggcgggtgtt
     1561 catttccatg aagtggaaat cgcccgcctg gccgacgatg aactcgacgg tgccggcacc
     1621 gacgtagttc accgcgcgtg cggcagcgac ggcggcttcg cccatcgcct tgcggcgtgc
     1681 cggggtcagg aacggcgagg gggtttcctc cagcaccttc tggtagcggc gctgcgccga
     1741 gcactcgcgc tcgcccagat ggatcacgtg gccgtggcgg tcgccgaaga tctggaactc
     1801 gatgtggcgc gggtgctcga cgtagcgttc gagcagcatc gaggcgtcgc cgaacgcggc
     1861 cttcgccacg cgctgcgcgg tggcgagcgc ctccggaaat tccgcatccg aacgcacgat
     1921 ctgcatgccc ttgccgccgc cgcccgccga gggcttgatg atcagcggat agccgacttc
     1981 atgcgcgcgc tcggcaaggt aggcgttgtc ctggttgtcg ccgtcgtagc cgggcaccag
     2041 cggcaccgcg tgcttcgcca tcaggtgctt ggcggcggcc ttggaaccca tcgcctcgat
     2101 gctctcggga tcggggccga tgaacacgat gccggcgtcc ttgcacgcgc gcgagaacgc
     2161 ggtgttttcc gacaggaacc cgtagccggg gtggatcgcc tgcgcgccgc tctgctttgc
     2221 cgcggcgagg atcgcgtcga tgcgcaggta cgactcggaa ggcgcggaac tgccgatcgg
     2281 ccaggcctcg tcggccaggc ggacatgctg tgcattgcgg tcggcttcgg aatacaccgc
     2341 gatactgtgg atgccgagcc gccggcaggt gcgcatcacg cggcaggcga tttcaccgcg
     2401 attggcgatc aacacgcgtt cgaacatgca gggctcccgg caccactaag cgttaccgtg
     2461 aaacgcggaa agttagcaga ttgccgcctt ctcgccgatg cgcagcgcag caaacgcctt
     2521 actcgccttc ccggtaatca cgcgtgtcga cggtccgccc gatgcagcgg aatcgcgccg
     2581 ggacgttgct cacgtccggc gcgttgtcga cgaaggcgcc gaatttgccc gagtcggggc
     2641 actcgcagat ttccgccggc gcgatggcgc tgatcgcgag gtagcgcatt tccgtggtgc
     2701 cggtgttgac gatctgatgc gctgtttccg ggcggccggc gggacaggcg atctcgcccc
     2761 agcgcaggtc gtagcgtccg acggcggcgc cttgcggcac gccagcgtgg atcggcgtgt
     2821 cggtggcgga ctgcaccacc acgtcggcga ggtggatgac cggccgggcc ctgcccgagg
     2881 tcatccggcg acccaggacg gtgcgcgcgt gtcgaggaac gcgcccaggc cgtgctggcc
     2941 ttcgggcgac acgcgcaggc gcgcgatcag ctcggcgttt tcggtgtcga tgcgctccgc
     3001 gccggcggca tcgcaaccgg cgatgcgcag cgccagcgcc ttcgcctcgc gctgcgcgat
     3061 cgggcccgcc ttgccgagaa agtgcagttg gcggtcgatc gcggcgtcga gcgcatcggc
     3121 gccgaccacg gcgtgcagca gcccgatgcg ctgcgcttcg gcggcatcga acacctcacc
     3181 gctgatgaac aggcggcgcg catggcgcag gccgatggcg gccacgacgt acggcgagat
     3241 cgtcgccggg acgaggccaa gcttcacttc cgacaacgcg aacttggagc cttcgacgcc
     3301 gaccgcgaca tcgcagcagg cgaccagccc gacgccgccg ccatacgccg cgccgttgac
     3361 gcgggcgatc gtcggtttcg acaggaattg cagcgtgcgc agcaggtgcg cgaggcgctg
     3421 cgcatcggcc cggttctccg cctcgcttgc ggcgaccatg ccgcgcatcc agttgagatc
     3481 cgcgccggcc gagaagcagc tgccgttgcc ggtgagcacg accaggcgca cggcaggatc
     3541 ggcgtcggcg gcgagcaacg cggcggtgag ttcggcgatc agcgtgtcgt cgaatgcgtt
     3601 gtggaccttc gggcggtcca tggtcagcgt gcgcacgccg ccctggttgg tgatgacaat
     3661 cgaggtactc atgttgtctc caaacgtcac atgcggaaca cgccgtaggg ttgcggttcg
     3721 agcggcgcgt tcatcgatgc cgagatcgcc agcgccagca cgcgccgggt atccgccggg
     3781 tcgatcatgc cgtcgtccca caaccgcgcg ccggaatagt acgggctgcc ctggcgctcg
     3841 tactgctcgc ggatcggcgc cttgaaggcg tcttcttcgt ccttcgacca cgcgccaccg
     3901 cgcgcttcga tgccgtcgcg cttgaccgtg gccagcacgc tggcggcctg ctcgccgccc
     3961 atcacgctga tgcgcgcgtt cggccacatc cacaggaagc gcgcgccgta ggcgcggccg
     4021 cacatcgcat agttgccggc gccgaagctg ccgccgatca ccacggtgaa cttcggcacg
     4081 tgcgagcagg cgacggcggt gaccatcttc gcgccatcct tggcgatgcc ggcctgctcg
     4141 tacttcttgc cgaccatgaa gccggtgatg ttctgcagga acaccagcgg cacgttgcgc
     4201 tggttgcaca gctcgatgaa gtgcgcgccc ttcagcgcgc tctcggcgaa caggatgccg
     4261 ttgttggcga cgatgcccac cgggtagccg tggatgtgcg cgaagccgca caccagggtc
     4321 ttgccgtagc gcgccttgaa ctcgtcgagc tcgctaccgt ccaccagccg cgcgatgatc
     4381 tcgcgcacgt cgaagggcgt gcgggcgctt tcggggatga cgccgtacag ctcggccgga
     4441 tcgtacgccg gggcgcgcgc ttcgcgtcgg gcgacgggtg tcctcgggga tcacgccgta
     4501 cagctcctcg accggatatt tcggcggcac cggttcgcca agcgcgagcg gcatcggctt
     4561 ggtgcggttg agcgaggcga cgatgtcgcg tgcgatcgac agcgcgtgcg cgtcgttctc
     4621 ggcgaagtgg tcggcgacgc ccgagatcgc ggtgtgcacg tcggcgccgc ccagggtctc
     4681 ggcatcgacg atctcgccgg tcgcggcctt caccagcggc gggccgccaa ggaagatcgt
     4741 gccctggttc ctcacgatca ccgcttcgtc cgacatcgca gggacatagg cgccgccggc
     4801 ggtacaagag ccatgcacga cggcgacctg ggcaatgccg gcggccgaca gccggg
//
LOCUS       DASSVL010000085         2392 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_510153, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000085 DASSVL010000000
VERSION     DASSVL010000085.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2392)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2392)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2392
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_510153"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..141
                     /locus_tag="VFM52_01425"
     CDS             <1..141
                     /locus_tag="VFM52_01425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008208859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PhoH family protein"
                     /protein_id="HET8763856.1"
                     /translation="HAIEVLKGVDGISFTFFDSHDVVRHPLVAKIVRAYEAFEQRGED
                     AK"
     gene            138..680
                     /gene="ybeY"
                     /locus_tag="VFM52_01430"
     CDS             138..680
                     /gene="ybeY"
                     /locus_tag="VFM52_01430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013534508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA maturation RNase YbeY"
                     /protein_id="HET8763857.1"
                     /translation="MTRARTLAAATTQPDAKASRLKQQPGVVVHLGYAVPRAGIPSAA
                     SFRRWVAAALRGAKRRRATELSIRIVGVDEGRTLNREYRGKDYATNVLSFGAELPPGV
                     KLPLIGDMVICAPVVAREAAEQDKRERDHWAHLTVHSTLHLLGYDHVVDTEAEVMEAL
                     EVRILATLGIADPYADEQGS"
     gene            1205..2380
                     /locus_tag="VFM52_01435"
     CDS             1205..2380
                     /locus_tag="VFM52_01435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family efflux transporter periplasmic
                     adaptor subunit"
                     /protein_id="HET8763858.1"
                     /translation="MPRLAGYGLVAFILWLLVSTLVKPWLSSSATRAVLDAPAILITT
                     PISGTVSALYAKNGQPLEPGQTVAVVKNDTVARDTLTTLLTQRLGLRGKLDDLSNQIQ
                     SNQRMLGYVDEQYQRYQHANVAQLENTYASLQAQQDAASAKLSELNSSYQRAMILQHD
                     GAVSAAVVSTAGAKANIAGKEADALDQSTRGVAASLAAARKGIYVATGQGSNDRLTQL
                     SQQRASLQTGIASGQAQLDALNNQMVSLDALIAREQERLHALSDYVVKAASGGTAQDI
                     VTPVGTQVAAGATLVRATDCSKTNVVAVFPARMASRLNIGTALLVHVSESSRPRRAHI
                     TQILPAAKESLQNTYSAPFPYAEDGSVYTVAQWDEHSTANRTPPPCAPGRSVTASLF"
BASE COUNT          431 a          871 c          741 g          349 t
ORIGIN      
        1 cacgcgatcg aggtgctgaa gggcgtcgac ggcatcagct tcaccttctt cgattcgcac
       61 gacgtcgtgc gccatccgct ggtggcgaag atcgtgcgcg cgtacgaagc gttcgaacag
      121 cggggcgagg acgccaaatg acccgcgcgc gaacgctcgc agccgcgacg acgcagcccg
      181 acgcaaaggc atcgcggctg aagcagcagc ctggcgtggt ggtgcatctc ggctacgcgg
      241 tgccgcgcgc cggcatcccg tcggcagcca gtttccgtcg ctgggtcgcc gccgcactgc
      301 gcggcgcgaa gcggcggcgg gccaccgagc tgtccatccg catcgtgggc gtggacgaag
      361 gccgcacgct caaccgcgag tatcgcggca aggactacgc caccaacgtg ctctcgttcg
      421 gggccgaact gccgcccggc gtgaagctgc cgctgatcgg cgacatggtg atctgcgcac
      481 cggtcgtcgc gcgcgaggcc gccgagcagg acaagcgcga acgcgaccac tgggcgcatc
      541 tcaccgtgca cagcaccttg cacctgctcg gctacgacca cgtcgtcgat accgaagccg
      601 aggtgatgga agcgctggaa gtgcgcatcc tcgccaccct cggcattgcc gatccgtatg
      661 ccgacgaaca gggatcgtga cgccgcggca tcgccggctt cgcctggtga ctcgcccgcg
      721 acgacgcagg tcgtgacacc ggaacgtcgc gcaaatcatt ggctgccatc gcgcagttgc
      781 cggacgtttt ccgcctcgtt ccagcacgat gtcgcccgcg tatcaccgcg catgaatcgc
      841 gcccgctttt gaactcagcc taaccattcc cgggaatttt tcccgccgaa gacaggccag
      901 gttcatcgcc aaagaactat cccttaacgg gtccggacat ctggcgcgac gcatcgccca
      961 ggagccttcc ccgtcaacgc ggcacgcaag ccacgtgccc cggacttcaa tccatcggca
     1021 gccatctcga tcgagatgtg cgtcttcccg ccctcgcctc gccgccaggg tgcaggcgtc
     1081 cgcacggcgc cacctgaccg aggtgatcga tttgaagacc gacttgctcc ctcttgagcg
     1141 tctgcaggat accgagacgc taccaggccc gctcgctccc ccgcgcaagt ctcccctggc
     1201 catcgtgccc cgcctggccg gctacggcct ggtcgccttc atcctctggc tgctggtttc
     1261 cacactggtc aagccgtggc tgtccagcag cgccacgcgc gcggtgctcg atgcgccggc
     1321 gatcctgatc accaccccga tcagcggcac ggtgagcgcc ctatatgcga agaatggcca
     1381 gcccctcgag cccggccaga ccgtcgccgt ggtgaagaac gacacggtgg cccgcgacac
     1441 cctcaccacg ctgctcaccc agcgtcttgg actgcgcggc aagctggacg acctgtccaa
     1501 ccagatccag tcgaaccagc gcatgctggg atacgtcgac gagcagtacc agcgctacca
     1561 gcacgccaat gtcgcgcaac tggaaaacac ctatgcctcg ctgcaggcgc agcaggacgc
     1621 cgcctcggcc aagctctccg aactcaacag cagctatcag cgcgccatga tcctgcagca
     1681 cgacggcgcc gtgagcgcgg ccgttgtgtc gaccgcgggc gccaaggcca acatcgccgg
     1741 caaggaggcc gacgcactgg accagagcac ccgtggcgtc gctgcaagcc tcgcggccgc
     1801 caggaagggg atctacgtgg ccaccggcca gggcagcaac gaccgcttga cgcagctgtc
     1861 gcagcaacgt gccagcctgc agaccggcat cgccagcggc caggcccaac tggatgcgct
     1921 caacaaccag atggtcagcc tcgacgcgct gatcgcacgc gaacaggaac gcttgcatgc
     1981 gctctccgac tatgtggtga aagccgccag cggcggcacc gcgcaggaca tcgtcacccc
     2041 ggtgggcacc caggtggcgg ccggcgcgac cctggtgcgc gccaccgact gcagcaagac
     2101 caatgtcgtg gcggtgtttc cggcgcgcat ggccagccgc ctgaacatcg gcacggcatt
     2161 gctggtgcat gtcagcgaat cgtcgcggcc acgccgtgcg cacatcacgc agatactccc
     2221 ggccgccaag gagtcgctgc agaacaccta cagtgcgccg ttcccgtatg ccgaggacgg
     2281 ctccgtctac accgtcgcgc aatgggacga gcacagcacg gcgaaccgca cgccgccgcc
     2341 gtgcgcgccc ggccgcagcg tcaccgcgag cctgttctga ccggcgatgg ac
//
LOCUS       DASSVL010000086         2370 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1244988,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000086 DASSVL010000000
VERSION     DASSVL010000086.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2370)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2370)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2370
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1244988"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..244)
                     /locus_tag="VFM52_01440"
     CDS             complement(<1..244)
                     /locus_tag="VFM52_01440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007806641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster-binding protein"
                     /protein_id="HET8763859.1"
                     /translation="MPIVTLKRSGRRFAVATAETVLEAAQRAGVALPYSCRSGVCGSC
                     KATLLDGQCSYPRNPPLALDAGELASHAILPCQAVPV"
     gene            305..745
                     /locus_tag="VFM52_01445"
     CDS             305..745
                     /locus_tag="VFM52_01445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007513975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hotdog fold thioesterase"
                     /protein_id="HET8763860.1"
                     /translation="MSIWHNDIDLARIDGWRTNTLMEALGIRITAFGDDWLAGTMPVD
                     RRTHQPYGLLHGGASVALAETLGSTAAMLTLDSAKYRTVGLDINANHLRSVRGGLVTG
                     TARPFHRGHSTQVWEIRIEDDAARLTCIARLTMAVVPAGAIPAP"
     gene            742..1686
                     /locus_tag="VFM52_01450"
     CDS             742..1686
                     /locus_tag="VFM52_01450"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019466130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine protein kinase"
                     /protein_id="HET8763861.1"
                     /translation="MNAAPYTDLTPDLVLDAVAACGLAPDGRLLALNSYENRVWQVGI
                     EDASPVIVKFYRPGRWSDAAIGEEHTFARELAAEEIPVVAPLEFAGRTLLVHAGYRYA
                     LAPRHGGRAPQLESRETLEWLGRLIARVHVVGERTPFVHREALDRQHFIATPARAVLA
                     SPLLPAHLHAAYREAAQALDRAVAARCTAVGPVRSLRLHGDCHAGNILWTDAGPHFVD
                     LDDARTGPAVQDLWMLAADDPALDALLAGYTQMRDFDPAERALIPALRAMRQLHHAGW
                     IAARWEDGAFPAAFPFAAEPRWWEEHIEDLRALAAQQG"
     gene            1751..>2370
                     /locus_tag="VFM52_01455"
     CDS             1751..>2370
                     /locus_tag="VFM52_01455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007081552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1190 domain-containing protein"
                     /protein_id="HET8763862.1"
                     /translation="MKRSRTAGLILMGTAPLLLSACSHEPDAVRSGLYTSVDACVAAG
                     NDRSTCTDAYVSAYHESKAAAPAFTTEGECEARYGPSGCIVRSEGGHSLFMPMMAGFM
                     LAQAMRGSQATGAFRSAAAFRDPVRGWSQAPWMDQGKQPPANGSPAAGGGGNGGGGYF
                     RGTSGAASNPLTAVDTTPDRASTTRVSGAQARTGWMTASRGGFGSGG"
BASE COUNT          356 a          863 c          830 g          321 t
ORIGIN      
        1 cgaccggcac cgcctggcac ggcaggatcg cgtgactggc cagttccccc gcatccagcg
       61 ccagcggcgg gttgcgcggg tagctgcact ggccatcgag caaggtagcc ttgcaactgc
      121 cgcatacgcc ggaccggcac gaatacggca gcgccacgcc ggcgcgctgc gcggcttcga
      181 gcacggtttc ggcggtagcg acggcgaacc gccgacctga gcgtttcagg gtcacgatgg
      241 gcacgcgcgc attgtcgccg cgatggccgc gcaccgacaa tgtggttttc gccggcggta
      301 cgacatgagc atctggcaca acgacatcga ccttgcgcgc atcgacgggt ggcgcacgaa
      361 caccctgatg gaggcgctcg gcatccgcat caccgcgttc ggcgacgact ggctcgccgg
      421 cacgatgccg gtcgaccgtc gcacccacca gccctacggc ctgctgcacg gcggcgcctc
      481 ggtggcgttg gcggaaaccc tgggcagcac ggcggcgatg ctcacgctgg attcggcgaa
      541 gtaccgcacc gtcgggctgg acatcaacgc caaccacctg cgcagcgtgc gcggcggcct
      601 ggtcaccggc accgcacggc cattccaccg cgggcacagc acccaggtgt gggaaatccg
      661 catcgaggac gacgcggcgc ggctgacctg catcgcgcgg ctgaccatgg cggtggtgcc
      721 ggccggcgcc atcccggcgc catgaacgcc gcgccataca ccgacctcac gcccgacctc
      781 gtgctcgatg cggtcgcggc gtgcggcctc gcgccggacg gccggctgct cgcgctcaac
      841 agctacgaaa accgcgtgtg gcaggtgggc atcgaagacg ccagcccggt gatcgtgaag
      901 ttctaccgcc cgggacgctg gagcgatgcc gcgatcggcg aggaacacac ctttgcacgc
      961 gagctggccg cggaggagat tcccgtcgtt gcgccactcg aattcgccgg gcgcacgctg
     1021 ctcgtgcacg ccgggtaccg ctacgcgctg gcgccgcgcc acggcggccg cgccccgcaa
     1081 ctcgaatcgc gcgagacgct cgaatggctc ggccggctga ttgcccgcgt gcacgtcgtc
     1141 ggcgagcgca cgccgttcgt ccaccgcgag gcgctggatc gccagcattt catcgctaca
     1201 ccggcccgtg cggtgctcgc ctcgccgctg ttgccggcgc acctgcacgc cgcctatcgc
     1261 gaggcggcgc aggcgcttga tcgggccgtc gccgcgcgct gcaccgccgt cggcccggtt
     1321 cgatcgctgc gcctgcacgg cgactgccac gccggcaaca tcctgtggac ggatgccggc
     1381 ccgcatttcg tcgacctcga cgacgcacgg acggggccgg cggtgcagga cttgtggatg
     1441 ctggcggccg atgatccggc gctcgacgcg ctgctcgccg gctacaccca gatgcgcgat
     1501 ttcgacccgg ccgaacgcgc actcataccc gcgttgcggg cgatgcgcca gctgcatcac
     1561 gccggctgga tcgccgcgcg ctgggaggac ggcgcgtttc ccgccgcgtt cccgttcgcc
     1621 gccgagccgc gctggtggga ggaacacatc gaggatcttc gcgcgctcgc ggcgcagcag
     1681 ggatgaaatg gccgattccg cggcccgcaa ggctctggca cactgcgcca tcccgcgcag
     1741 gacgcaagcg atgaaacgat cccgcaccgc cggcctcatc ctgatgggca ccgcgcccct
     1801 gttgctcagc gcctgcagcc acgagccgga tgcggtgcgc agcgggctgt atacctcggt
     1861 cgacgcctgc gtcgccgccg gcaacgaccg ctcgacctgc accgacgcct acgtcagcgc
     1921 ataccacgag tcgaaggcgg ccgcgccggc gttcaccacg gagggcgaat gcgaggcgcg
     1981 ctacgggcca tccggctgca tcgtgcgcag cgaaggcggg cacagcctgt tcatgccgat
     2041 gatggctggc ttcatgctgg cgcaggcgat gcgcggcagc caggcgacgg gcgcgttccg
     2101 cagcgccgct gccttccgtg acccggtgcg cggctggagc caggcgccat ggatggacca
     2161 gggcaagcag ccgcccgcca acggcagccc ggctgcgggt ggtggcggca atggcggcgg
     2221 cggttatttc cgcggaacca gcggtgcggc atcgaacccg ctgaccgcag tcgacaccac
     2281 gccggatcgg gcgtcgacca ccagggtaag tggcgcgcag gcccgcaccg gctggatgac
     2341 ggccagccgc ggtggattcg gcagcggcgg
//
LOCUS       DASSVL010000087         2590 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_779089, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000087 DASSVL010000000
VERSION     DASSVL010000087.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2590)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2590)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2590
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_779089"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..798
                     /locus_tag="VFM52_01460"
     CDS             <1..798
                     /locus_tag="VFM52_01460"
                     /EC_number="1.2.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017463387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008774 - acetaldehyde dehydrogenase
                     (acetylating) activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetaldehyde dehydrogenase (acetylating)"
                     /protein_id="HET8763863.1"
                     /translation="ESEGLKRAQEMGVKVTADGVDALVPHVKEDGIQIAFDATSAYAH
                     AENSRKLTALGVVMVDLTPAAIGPYCVPPVNLEAHVGKHEMNVNMVTCGGQATVPLVA
                     AVSRVQDVAYGEIIATVSSKSVGPGTRKNIDEFTRTTASAVEQVGGAKKGKAIVIINP
                     ADPPLIMRDTVHCLTVETPKQAEIEASVRAMIKEVQKYVPGYKLVNGPVIDGNRVTIW
                     MEVEGLGDFLPKYAGNLDIMTSAAARTAEMFAKEMLAGTFVPATAAV"
     gene            810..1850
                     /gene="dmpG"
                     /locus_tag="VFM52_01465"
     CDS             810..1850
                     /gene="dmpG"
                     /locus_tag="VFM52_01465"
                     /EC_number="4.1.3.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017463388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008701 - 4-hydroxy-2-oxovalerate aldolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-2-oxovalerate aldolase"
                     /protein_id="HET8763864.1"
                     /translation="MNLEGREITLHDMTLRDGMHPKRHKITIEQMKSIATGLDEAGVP
                     LIEVTHGDGLGGASVNYGFPAASDEEYLGAVIPLMKHAKVSALLLPGIGTVDDLLMAK
                     EIGVHCIRVATHCTEADVAEQHIKMARKQGMDTVGFLMMSHMNSPEGLVKQAKLMESY
                     GANCIYITDSAGYMLPDDVRARLAPVRDALKPETELGFHGHHNLAMGIANSLAAVEAG
                     ANRIDCATTGLGAGAGNTPMEIFVAVCNRKGIKTGVELWKIQDVADDLVLPIMDFPVR
                     AGRDAITIGYAGVYGSFLLFAKRAAEKYGLSSRDILVELGNRKMVGGQEDMIEDTALT
                     LLKRKQAQAASA"
     gene            1847..>2590
                     /locus_tag="VFM52_01470"
     CDS             1847..>2590
                     /locus_tag="VFM52_01470"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HET8763865.1"
                     /translation="MRLAGRVALVTGSALGIGRGIARRYASEGAALVLADLDAKRGAA
                     GAEEIRRDFGADVLFLRTDVGVRAEIEALVAAGAERFGHLDILVNNAWGRRAGSSGFA
                     PVEGVDDADVEHGFRIGAEAALWAMQTVFPGMRERGWGRVINLCSLNGVNAHPYSLAY
                     NMAKEALRTLTRTAAREWAPFGICCNAICPGAATEAYRQFAAAQPENAAELLKLNPMG
                     YMGDPERDIGGVALFLASEDARYLTGNTLF"
BASE COUNT          476 a          864 c          887 g          363 t
ORIGIN      
        1 gagagcgaag gcctgaaacg tgcgcaggaa atgggcgtca aggtcactgc cgacggcgtg
       61 gacgcgctgg tgccgcacgt gaaggaagac ggcatccaga tcgcgttcga cgccaccagc
      121 gcctacgcgc acgcggaaaa cagccgcaag ctgaccgcgc tgggcgtggt gatggtcgac
      181 ctgacgccgg ccgcgatcgg cccgtattgc gtgccgccgg tgaacctgga ggcgcacgtc
      241 ggcaagcacg agatgaacgt caacatggtc acctgcggcg gccaggccac ggtgccgctg
      301 gtcgccgccg tgagccgcgt gcaggacgtg gcgtacggcg aaatcatcgc caccgtgtcc
      361 agcaagtcgg tcggccccgg cacgcgcaag aacatcgacg agttcacccg caccaccgcc
      421 agcgcggtgg agcaggtggg cggcgcgaag aagggcaagg cgatcgtcat catcaacccg
      481 gccgacccgc cgctgatcat gcgcgacacc gtgcactgcc tgacggtgga gacgccgaag
      541 caggccgaga tcgaggcctc ggtgcgcgcg atgatcaagg aagtgcagaa atacgtgccc
      601 ggctacaagc tggtcaacgg cccggtgatc gacggcaatc gcgtcaccat ctggatggag
      661 gtggaaggcc tcggcgattt cctgccgaag tacgccggca acctggacat catgacctcc
      721 gcggccgcgc gcacggcgga gatgttcgcg aaggaaatgc ttgccggcac cttcgtcccc
      781 gccaccgccg ccgtctgagg gagaccgcca tgaaccttga aggcagagag atcacgctgc
      841 acgacatgac gctgcgcgac ggcatgcacc cgaagcggca caagatcacc atcgagcaga
      901 tgaagtcgat cgcgaccggg ctcgacgaag ccggcgtgcc gctgatcgag gtgacccacg
      961 gcgacggcct gggcggcgcc agcgtcaact atggattccc ggcggcgagc gacgaggaat
     1021 atctcggcgc ggtgattccg ctgatgaagc acgcgaaggt gtccgcgctg ctgctgcccg
     1081 gcatcggcac cgtggacgat ctcctgatgg cgaaggagat cggcgtgcac tgcatccgcg
     1141 tcgccaccca ctgcaccgag gccgacgtcg ccgagcagca catcaagatg gcgcgcaagc
     1201 agggcatgga caccgtcggc ttcctgatga tgtcgcacat gaattcgccc gagggcctgg
     1261 tgaagcaggc caagctcatg gagagctacg gcgccaactg catctacatc accgattccg
     1321 ccggctacat gctgcccgac gatgtgcgcg cacggctggc gccggtgcgc gatgcgctga
     1381 agccggagac cgaactgggt ttccacggcc accacaacct ggcgatgggc atcgccaaca
     1441 gcctcgcggc ggtggaggcc ggcgcgaacc gcatcgactg tgccaccacc ggcctcggtg
     1501 ccggcgccgg caacacgccg atggagatct tcgtcgccgt gtgcaaccgc aagggcatca
     1561 agaccggcgt cgaactgtgg aagatccagg acgtggccga cgacctcgtg ctgccgatca
     1621 tggactttcc ggtacgcgcc gggcgcgacg cgatcaccat cggctacgcc ggcgtgtacg
     1681 gcagtttcct gttgttcgcg aagcgcgcgg cggaaaagta cggcctctcc tcgcgcgaca
     1741 tcctggtcga actgggcaac cgcaagatgg tcggcggcca ggaagacatg atcgaggaca
     1801 ctgcgctcac gctcttgaag cgcaagcagg cgcaagccgc ctcggcatga ggctggccgg
     1861 tcgcgtcgcg ctggttaccg gcagcgcgct cggcatcggg cgcggcatcg cgcggcgcta
     1921 cgccagcgaa ggcgccgcgc tggtgctggc cgacctcgat gccaaacgcg gcgcggccgg
     1981 cgcggaggaa atccgtcgcg acttcggcgc cgacgtgctg ttcctccgca ccgacgtcgg
     2041 cgtgcgcgcg gagatcgagg cgctggtcgc ggccggggcg gaacgcttcg gtcacctcga
     2101 catcctggtc aacaatgcct ggggccggcg cgcgggcagc agcggttttg cgccggtcga
     2161 aggcgtcgac gatgccgacg tggaacatgg cttccgcatt ggcgccgagg ctgcgctgtg
     2221 ggcgatgcag acggtgttcc ccggcatgcg cgaacgcggc tggggccgcg tcatcaacct
     2281 gtgctcgctg aacggcgtca acgcgcatcc gtattcgctt gcctacaaca tggcgaagga
     2341 agcgctacgc accctgaccc gtaccgccgc gcgcgagtgg gcgccgttcg gcatctgctg
     2401 caacgcgatc tgcccgggcg cggcgaccga ggcctatcgc cagttcgccg ccgcgcagcc
     2461 ggaaaacgcc gccgagctgc tgaagctcaa cccgatgggc tacatgggcg accccgaacg
     2521 cgacatcggc ggcgtcgccc tgttcctcgc cagcgaggac gcgcgctacc tcaccggcaa
     2581 caccttgttc
//
LOCUS       DASSVL010000088         5532 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_72538, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000088 DASSVL010000000
VERSION     DASSVL010000088.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 5532)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5532)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5532
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_72538"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..565
                     /locus_tag="VFM52_01475"
     CDS             <1..565
                     /locus_tag="VFM52_01475"
                     /inference="COORDINATES: protein motif:HMM:NF024591.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8763866.1"
                     /translation="GDQGEVCIALTPARPTGLMQGYLNAPEKTAEVMREGYYHTGDIA
                     ARDAAGWYTYVGRADDVFKASDYRISPFELESAMIKYPAITEAAVIPSPDPVRTSVPK
                     AFVTVRAGTAVTPELARDVFAFARKELAAYKRVRRIQFVAELPKTISGKIRRVQLRAD
                     EIRRRAEDRRGEQEFLEEDFPDLKSGG"
     gene            complement(573..1427)
                     /locus_tag="VFM52_01480"
     CDS             complement(573..1427)
                     /locus_tag="VFM52_01480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8763867.1"
                     /translation="MTSLVASAAPTRTIFVLGAKDPEMKLIREVLGFLGWELMPATRG
                     GKRVYPGNAYAADAPHLDWSAFAAVYAVECGWHAEAANVVHIDHHRPGDPGYGQPPAA
                     YFSAASIGQILALAGRELPVRGHQAELDALRARYSHVAHLAAAADHCLGAAYRGACPG
                     IDPEELTCWIVERRAEFLHLTPETLRARIDASCVRIRALAAGGLADLRGEPGGTVPEA
                     PHAACIAGIAVLTEVVDRDGRHKVGLLGADAAQVTRFLAGAMVPGLVDCYGDPARGFA
                     GGYRSPVR"
     gene            complement(1440..2693)
                     /locus_tag="VFM52_01485"
     CDS             complement(1440..2693)
                     /locus_tag="VFM52_01485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007806628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme biosynthesis HemY N-terminal
                     domain-containing protein"
                     /protein_id="HET8763868.1"
                     /translation="MSLWRWILWLVIVAALAAFGWHWVAADPGYVLVRLHGWRVQTTV
                     VAAVVALVIAWAVLTGLWRLVSWPFGALSRRHRRVSRQRLASGLIALLEGRHGDAERD
                     LNRASRLDLMRGPALLASAEAASRRGEQEHALEILAAASQSAPMAARVMRARVLCRDG
                     KAAEALALLAPDADKGTLPPGGWRELAQAALGVGDTKRALSTLEPLHKSGALGARGYA
                     ALEAEVLRAAIDAAPDGAELNALWSSLPKTQRRVPAAIDAYARRIAGFGLVLPAMDEL
                     ESALRREWSPMLAETYGLLAGGDLDARLRRVEGWLDAHPNDPVLLLAAGRVCARDRLW
                     GKARQYLERSLALAPSSGAWEALGETLAGQGDAERAQRCWRNALALARGERAQPLPGQ
                     AAGVIDTSAIAVEERDQHGVPRLKG"
     gene            complement(2690..3784)
                     /locus_tag="VFM52_01490"
     CDS             complement(2690..3784)
                     /locus_tag="VFM52_01490"
                     /EC_number="2.1.1.107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015446601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III C-methyltransferase"
                     /protein_id="HET8763869.1"
                     /translation="MDEHDSVPTGASPSPAPASRPPSHGGSIALALLLALLALLAAGY
                     VGWHQWQQRSGQAADARALGALQQRVTALETTLASVSGGRANLAQRLDAADQLDHSLQ
                     ASTQAQGDRLRLLEEAVGKLSESTLSAHDATLLDETESLLRMAKERYDLFHDARGAVS
                     AYALAAQTLAEVNDGAFAGLRESIETERRALLATQPTEQAVALGKLTALRGELPTLPL
                     KPLDAPANAPATSAWARIGRALAGVVSVQRDNGAPLAIADARFARELVALDLAQAQAA
                     LLAHDPKAWSAALQRAGDGLANQFDTGDAGVQQAQASLKHLVTALPHNTPVQLGAALT
                     ELRSLRALHTLTAAPPPAATTPSRPAKVAR"
     gene            complement(3856..4608)
                     /locus_tag="VFM52_01495"
     CDS             complement(3856..4608)
                     /locus_tag="VFM52_01495"
                     /EC_number="4.2.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008216580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004852 - uroporphyrinogen-III synthase
                     activity [Evidence IEA];
                     GO_process: GO:0006780 - uroporphyrinogen III biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0006782 - protoporphyrinogen IX
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III synthase"
                     /protein_id="HET8763870.1"
                     /translation="MASPDSGKRAALAGRTIVITRPAGTGGGFARQVRAAGGVPLLLP
                     GLSLRGLGDAASLRAVLADEVLVFTSPAAVRFAARLAPLRTRATVLAVGQGTARALRR
                     HGINAQVPARQDSEGVLELEGARHLAGRRVGLIGAPGGRGVLREQLAARGAVLRELHV
                     YQRVPPRLDRRHVEAVDHLPRSARVLLSSAEALGHLVHQLPAATRVRLCAAVAVVSSE
                     RLAQAARGAGFGRVVQAASANARDLLAAAARR"
     gene            4681..5145
                     /locus_tag="VFM52_01500"
     CDS             4681..5145
                     /locus_tag="VFM52_01500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007081546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YiiD C-terminal domain-containing protein"
                     /protein_id="HET8763871.1"
                     /translation="MNPNTDPAHELVRFIRDKIPLARAMALELAAHDDHHLCLRVPLA
                     PNVNDKGCAFGGSLTSVMTLAGWGLVELALRARGEACDVYVGESTVRYLQPVWADFSA
                     DAQLAEDADWARFFATLAARGKARIDVHCQVPGADDKPAAALTARFVAKRRD"
     gene            5197..>5532
                     /locus_tag="VFM52_01505"
     CDS             5197..>5532
                     /locus_tag="VFM52_01505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8763872.1"
                     /translation="MRRLLPLLAACILLAGCATQKRSDTLTTTLSAYAGAVRWNGLQS
                     AIGFVDPEVLKKNPPTDLDLARYQQVRVTDYDDGNGPVPVGDDEVRQTVRISFVNKHT
                     QVERSVTEQQ"
BASE COUNT          826 a         2079 c         1942 g          685 t
ORIGIN      
        1 cggcgaccag ggcgaggtgt gcatcgcgct cacgccggcg cggccgaccg ggctcatgca
       61 gggttacctc aacgcgccgg aaaaaaccgc cgaggtgatg cgcgagggct actaccacac
      121 cggcgacatt gccgcgcgcg acgccgccgg ctggtacacc tacgtcggcc gtgccgacga
      181 cgtgttcaag gcctcggact accgcatcag cccgttcgag ctggagagcg cgatgatcaa
      241 gtacccggcg atcaccgagg ccgcggtgat cccgagcccc gacccggtgc gcacctcggt
      301 gcccaaggcc ttcgtcaccg tgcgggcggg caccgccgtc accccggagc tcgcgcgtga
      361 cgtgttcgcg tttgcgcgca aggaactcgc cgcgtacaag cgcgtgcgcc gcatccagtt
      421 cgtcgcggag ctgcccaaga cgatctccgg caagatccgc cgcgtgcaat tgcgcgccga
      481 cgagatccgc cgccgcgcgg aagaccggcg cggtgaacag gaattcctcg aagaggattt
      541 tcccgatctg aaatctggcg gctgaggccg ggctagcgca ctggcgaccg gtagccgccg
      601 gcaaagccgc gcgccggatc gccgtagcaa tcgacgaggc cgggcaccat ggcgccagcg
      661 agaaagcgcg tgacctgcgc cgcatccgcg ccgagaaggc cgaccttgtg ccggccgtcg
      721 cgatcgacga cttcggtcag caccgcgatg ccggcgatgc acgccgcgtg cggcgcctcc
      781 ggcacggtgc cgccgggctc gccgcgcaag tcggcgagac caccggctgc cagcgcacgg
      841 atgcgcacgc acgaggcgtc gatgcgcgcg cgcaacgttt ccggcgtgag gtgcaggaac
      901 tcggcacggc gctcgacgat ccagcacgtc aattcctccg ggtcgatgcc ggggcacgcg
      961 ccgcgatagg cggcaccgag gcaatggtcg gcggcggcgg caaggtgcgc gacgtggctg
     1021 tagcgcgcgc gcagcgcatc cagctccgcc tggtggccgc gcactggcag ctcgcgcccc
     1081 gccagcgcaa ggatctgccc gatcgatgcc gcgctgaaat aggcggcggg cggctgcccg
     1141 tagccgggat cgccgggacg atggtggtcg atatgcacga cgttcgcggc ttccgcgtgc
     1201 cagccgcact ccaccgcgta caccgccgcg aaggccgacc agtccaggtg cggtgcgtcg
     1261 gcggcatagg cgttgcccgg gtacacgcgc ttgccgccgc gcgtggccgg catcagctcc
     1321 cagccgagaa accccagcac ctcgcggatg agcttcatct ccgggtcttt cgcgccgagc
     1381 acgaagatcg tgcgcgtggg cgccgcgctg gcaaccaggc tggtcatcgc cgcgcggcgt
     1441 caacccttga ggcgcggcac gccgtgctgg tcgcgctcct cgaccgcaat cgccgaggtg
     1501 tcgatgaccc cggcagcctg accgggcagc ggctgtgcgc gttcgccacg cgccagcgcc
     1561 agcgcgttgc gccagcaccg ctgcgcacgc tcggcatcgc cctgcccggc cagcgtctcg
     1621 cccagcgcct cccaggcacc actcgacggc gccagcgcca gcgagcgttc gagatattgc
     1681 cgggccttgc cccacaggcg gtcgcgggca cacacgcggc cggcggccaa cagcaggacg
     1741 ggatcgttcg gatgcgcgtc gagccagcct tcgacccgtc gcagccgggc atcgagatcg
     1801 ccaccagcca gcaggccgta ggtttccgcc agcatcggcg accactcgcg gcgcagggcc
     1861 gactccagct cgtccatcgc cggcagcacg aggccgaagc cggcgatgcg ccgcgcgtag
     1921 gcgtcgatcg ccgccggtac ccggcgctgc gtcttcggca ggctcgacca cagggcgttg
     1981 agctcggcgc catcgggcgc cgcgtcgatc gccgcacgca gcacctcggc ttcgagtgcc
     2041 gcatagccgc gcgcaccaag cgccccgctc ttgtgcagcg gttcgagcgt gctcagcgcg
     2101 cgtttggtgt cgccaacccc cagcgccgcc tgcgccagct cgcgccagcc gcccggcggc
     2161 agcgtgccct tgtcggcgtc cggcgccaac agggccagcg cctcggccgc cttgccgtcg
     2221 cggcacagga cgcgggcacg catcacgcgc gccgccatcg gcgccgactg cgaggccgcg
     2281 gcgaggattt ccagcgcatg ctcctgctcg ccgcgacgcg acgccgcctc ggccgaggcc
     2341 agcagcgccg gtccgcgcat caggtccagc cgcgaggcgc ggttcaagtc acgctcggca
     2401 tcgccgtggc ggccttcgag cagggcgatc agcccggacg cgagacgttg ccggctgacc
     2461 cgccgatgcc gccgcgacaa cgcgccgaac ggccagctca cgagccgcca caggccggtc
     2521 agcaccgccc acgcaatcac cagcgcgacc accgcggcaa ctaccgtggt ctgcacacgc
     2581 cagccatgca gacgcaccag cacgtagccg ggatcggccg ccacccagtg ccagccgaac
     2641 gccgccagcg cggcgacgat gaccagccac aggatccagc gccacaggct catcgcgcca
     2701 ccttcgccgg gcgcgacggc gtggtggcgg caggcggcgg ggcagcagtc agcgtgtgca
     2761 acgcgcgcag gctgcgcagc tcggtgagcg ccgcgccgag ctgcaccggc gtgttgtgcg
     2821 gcaatgcggt caccaggtgc ttgaggctgg cctgcgcctg ctgcacgccg gcgtcgccgg
     2881 tgtcgaactg gttggcaagg ccatcgcccg cacgttgcag ggcagcggac caggccttcg
     2941 gatcgtgggc aagcagcgcc gcctgcgcct gcgccaggtc gagcgccacc agttcgcgcg
     3001 caaagcgcgc atcggcgatc gccagcggcg cgccgttgtc acgctgcacg ctgaccactc
     3061 cggccaatgc gcggccgatg cgcgcccagg cgctggtggc cggtgcgttc gccggcgcat
     3121 ccagcggttt cagcggcagc gtcggcagct cgccacgcag cgcggtgagc ttgcccagcg
     3181 cgacggcctg ctcggtcggc tgggtggcca gcagcgcgcg gcgctcggtc tcgatgctct
     3241 cgcgcaggcc ggcaaacgcg ccgtcgttga cttccgccag cgtctgcgcc gccagcgcat
     3301 aggcactgac cgccccgcgg gcgtcgtgga acaggtcgta gcgctccttg gccatgcgca
     3361 gcagcgattc ggtttcgtcg agcagcgtcg cgtcgtgcgc cgacaaggta ctttcggaca
     3421 gcttgcccac ggcctcctcg agcaggcgca ggcgatcgcc ctgtgcctgc gtcgacgcct
     3481 gcaggctgtg gtcgagctgg tcggcggcat ccagccgttg cgcgaggttc gcgcgcccgc
     3541 cgctgacgct ggcgagcgtg gtctcgagcg cggtcacgcg ctgctgcagg gcgcccagcg
     3601 cccgcgcatc cgcggcttgc ccgctgcgtt gctgccattg atgccagccg acatagccgg
     3661 ccgccagcag cgccagcaag gccagcaaca gggccagcgc aatgctgccg ccgtgcgacg
     3721 gcggacggga agcgggcgcg ggtgacggcg aggccccggt cggtaccgaa tcgtgttcgt
     3781 ccatgccggg catgctaaca ggcgacccgg ggcggattca tgggcaggcc gtgatgcgcc
     3841 gcggcacccg cgccgtcagc gccgggccgc ggcggcgagc aggtcgcggg cattggccga
     3901 tgccgcctgc acgacgcgcc cgaaaccggc gccccgcgcc gcctgcgcca ggcgctcgct
     3961 gctgaccacc gcaaccgcgg cgcacagccg cacgcgggtg gccgccggca attggtgcac
     4021 caaatggccg agcgcctcgg cgctggacag cagcacgcgc gcgctgcgcg gcaagtggtc
     4081 gacggcctcg acatggcggc ggtcgagccg cggcggcacc cgctgataga catgcagttc
     4141 gcgcagcacc gcaccgcgcg cggccagctg ctcgcgcagc acgccacgcc ccccgggcgc
     4201 accgatcagg ccgacgcggc gtcccgcgag atggcgcgca ccctccagct cgagcacgcc
     4261 ctcgctgtcc tggcgtgcgg gcacctgggc gttgatgccg tgccggcgca aggcgcgcgc
     4321 cgtgccctgc cccaccgcca gcaccgtcgc ccgcgtgcgc agcggcgcga gccgggccgc
     4381 aaagcgcact gcggccgggc tggtgaacac cagcacttcg tcggccagca ccgcacgcag
     4441 ggacgccgca tcaccgaggc cgcgcagcga caaccccggc aacagcagcg gaaccccgcc
     4501 ggccgcgcgc acctgccggg cgaacccgcc gccagtaccg gccggacggg tgatgacgat
     4561 ggtgcggccg gccagtgccg cgcgcttgcc tgaatcgggg gaagccatgg gcgctccgtg
     4621 tgctgccatc gcgcgatggc ttgcagtgta atggcgggct gtcgacacga cggacccacc
     4681 gtgaacccga acaccgatcc cgcgcacgaa ctggtgcgct tcatccgcga caagatcccg
     4741 ctggcgcgcg ccatggcatt ggaactggcc gcgcacgacg accaccacct gtgcctgcgc
     4801 gtgccactgg cgcccaacgt caatgacaag ggctgcgcgt tcggcggcag cctcaccagc
     4861 gtgatgaccc tggccggctg ggggctggtc gagctggcgc tgcgagcgcg cggcgaagcc
     4921 tgcgacgtct atgtgggtga atccaccgtg cgctacctgc agccggtgtg ggccgacttc
     4981 agcgccgacg cgcagctggc ggaagacgcc gactgggcac ggttcttcgc cacgctcgcg
     5041 gcgcgcggca aggcgcgcat cgatgtccat tgccaggtgc cgggtgccga cgacaagccg
     5101 gcggcggcgc tcaccgcccg tttcgtggca aagcgccgcg attgatgcgc ccgcggcgac
     5161 gccgcagaat ggcgcgattg ccacggagcc cttgccatgc gccgcctcct gcccctgctc
     5221 gccgcctgca tcctgctcgc cggctgcgcc acgcaaaagc gcagcgacac gctcaccacc
     5281 acgctcagcg cctacgccgg cgcggtgcgc tggaacggcc tgcaaagcgc gatcgggttc
     5341 gtcgaccccg aggtgctgaa gaagaacccg ccgaccgacc tcgacctggc gcgctaccag
     5401 caggtgcgcg tgaccgacta cgacgacggc aacggcccgg tgccggtcgg cgacgacgag
     5461 gtacggcaga cggtgcgcat cagcttcgtc aacaagcaca cccaggtcga gcgcagcgtg
     5521 accgaacagc ag
//
LOCUS       DASSVL010000089         2379 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_72540, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000089 DASSVL010000000
VERSION     DASSVL010000089.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2379)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2379)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2379
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_72540"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(11..1816)
                     /locus_tag="VFM52_01510"
     CDS             complement(11..1816)
                     /locus_tag="VFM52_01510"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008210056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HET8763873.1"
                     /translation="MKRRDLLKAAIILPLLPLLMRSGTTVARDASRLATALRRRVRPG
                     RPGWPTAAEWGRLKQQVGGRLLKLEPPFAQGAMSPALQQLANPFAIGDNPALTQTSGW
                     ANAWSSQPSAYAVAAENTADVVAAVDFARRHHLRLVVKGGGHSYQGTSDAPDSLLVWT
                     RHMNRVDLHDAFVPHGCAGHVAPLPAVSIGAGAMWIDAYHAVTTQGGRYVQGGGCTSV
                     GVAGLLQSGGFGSFSKRWGTAASNLLEAEVVTADGQVRIANARTNPELFWGLKGGGGG
                     SLGVVTRLTLRTFELPTFFGGVGVTVKADSDAAYRALIAEAVSFYQRALFNPHWGEQM
                     KFYGRNVLEVSMMCQGLSKQEAEQTWAPFVAWVQARNDCHITKPFHALAAPAQHLWDA
                     DFLRKYLPSAIVPDNRPDAPSYRFLWAGDRDQAGWFIHGYQSAWLPASLLQPGHQTRL
                     VDALFNAAQHQGVSLHFNKGLAGAPADAIDRARDTATHPQVLDAFALAISASGGDPAY
                     PGMPGAKPDLAMAQRMAAGIERTMDALRAVAPDAGSYVSESDYFLRNWQQSFWGSNYP
                     RLAAAKRQYDPDGLFFVHHGVGSEEWSTDGFMRRG"
     gene            1961..>2379
                     /locus_tag="VFM52_01515"
     CDS             1961..>2379
                     /locus_tag="VFM52_01515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015448842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LytTR family transcriptional regulator"
                     /protein_id="HET8763874.1"
                     /translation="MSEPMAAGHSGPQRWRPAAIGFWLLVVALNTVFNGVDAQLEHSQ
                     LPAWMPWSWECSSALLVLALLPAVVAFERRWPLHLDDCPRRLPRHLAASVVFSLIHVG
                     GMVGLRKLAYAAAGQHYDFGAWWINFGYEYLKDVRTYA"
BASE COUNT          342 a          779 c          860 g          398 t
ORIGIN      
        1 cgcagcccca tcaacccctc cgcatgaaac cgtccgtgct ccactcctcg ctgccgacgc
       61 cgtggtgcac gaagaacagg ccatccgggt cgtactggcg ttttgccgcg gcgaggcgcg
      121 gatagttgct gccccagaag ctctgctgcc agttgcgcag gaagtagtcg ctttccgaaa
      181 cataggagcc ggcgtcgggc gccacggcgc gcagcgcatc catcgtccgc tcgattcctg
      241 ccgccatgcg ttgcgccatg gccaggtcgg gtttcgcgcc cggcatgccg gggtaggcag
      301 gatcgccgcc gctggcgctg attgcgaggg cgaaggcgtc cagcacctgc gggtgcgtgg
      361 cagtgtcgcg cgcgcgatcg atggcgtcgg ccggggcgcc ggccaaacct ttgttgaagt
      421 gcagtgagac gccctggtgc tgcgcggcgt tgaacagcgc gtcgacgagg cgcgtctggt
      481 gtcccggttg cagtagcgaa gccggcagcc aggcggattg gtagccgtgg atgaaccagc
      541 ccgcctggtc gcgatcgccg gcccacagga agcggtagct tggcgcatcc gggcggttgt
      601 ccggcacgat ggcgctcggc aggtatttgc gcaggaagtc ggcatcccac aggtgttggg
      661 ctggcgccgc gagtgcatgg aacggcttgg tgatgtggca gtcgttgcgg gcctgcaccc
      721 acgccacgaa gggcgcccaa gtctgttcag cctcttgctt ggaaaggcct tggcacatca
      781 tcgagacttc caggacgttg cggccgtaga acttcatttg ttcgccccag tgcggattga
      841 acagcgcgcg ctggtaaaag ctcaccgcct cggcgatcaa ggcgcgatag gccgcgtcgg
      901 agtcggcctt gacggtgacg cccaccccgc cgaagaacgt gggcagctcg aaggtgcgca
      961 gggtcagtcg cgtgaccacg ccgaggctgc cgccgccgcc acccttgagg ccccagaaca
     1021 gctccgggtt ggtgcgcgca ttggcgatgc gcacctggcc gtcggcggtg acgacttctg
     1081 cttcgagcag gttggaagcc gcggtgcccc agcgtttcga gaagctgccg aagccgccgc
     1141 tctgcagcag tccggccaca cccaccgagg tgcagccgcc gccctgcacg tagcggccgc
     1201 cctgggtggt cacggcgtgg taggcgtcga tccacattgc ccctgcgccg atgctcaccg
     1261 caggcagcgg tgccacatgg ccggcgcagc catgcggcac gaaggcgtcg tgcaggtcga
     1321 cccggttcat gtggcgcgtc cacaccaaga gcgaatccgg cgcgtccgaa gtgccctggt
     1381 aactgtggcc gccgcctttc accaccaacc gcaggtggtg cctgcgcgcg aagtcgacgg
     1441 ctgcgaccac gtcggcggtg ttctcggctg ccaccgcgta ggcgctgggt tgcgaggacc
     1501 aggcattggc ccagccgctg gtctgggtca gcgcggggtt gtcacctatc gcgaacgggt
     1561 tggcgagttg ctgcagtgcc ggcgacatgg cgccctgcgc gaatggcggt tccagtttca
     1621 gcagccgacc gccgacctgc tgtttcagcc gcccccattc cgcggccgtg ggccagcccg
     1681 gccggcctgg acggacgcgc cggcgcaggg cggtcgccag gcggctggcg tcgcgcgcca
     1741 cggtggtgcc gctgcgcatc agcaacggca gcagcggcag gatgatggcg gctttcagca
     1801 ggtcgcgtcg tttcatggcg gcactccgtg gtggctcggc gggcagcatg tgcctgcgga
     1861 cacccggcgc ccagcgccgc agtgacgggt cgcggcacgc ggggacgagt ggtggctggc
     1921 gcgggacgag gcggcgccgc gaacccgtag aatcgccggc atgagcgaac cgatggcagc
     1981 cgggcattcc ggtccccagc gttggcggcc ggcagcgatc ggtttctggc tgctggtcgt
     2041 cgcgttgaac acggtgttca acggcgtgga tgcgcagctc gaacattcgc agttgccggc
     2101 gtggatgccg tggtcgtggg aatgcagcag cgcgctgctg gtgctggcgc tgctgcccgc
     2161 ggtggtcgcc ttcgagcggc gctggccgct ccatctcgac gactgcccgc gccgcctgcc
     2221 gcggcacctc gccgccagcg tggtgttcag cctgatccac gtgggtggca tggtgggctt
     2281 gcgcaagctg gcctatgccg cggccgggca gcattacgac tttggtgcgt ggtggatcaa
     2341 cttcggctac gagtatttga aggacgtgcg cacctacgc
//
LOCUS       DASSVL010000090         3804 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1117735,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000090 DASSVL010000000
VERSION     DASSVL010000090.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3804)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3804)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3804
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1117735"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..488
                     /locus_tag="VFM52_01520"
     CDS             <1..488
                     /locus_tag="VFM52_01520"
                     /EC_number="2.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019464701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="gamma-glutamyltransferase"
                     /protein_id="HET8763875.1"
                     /translation="ANGTWVLLNDETDDFDLVPDTPNVYGLLGSKANAPQGGKRMLSS
                     MSPTIVIGKDRSAVIGSPGGSTIITQVFEGIMHFIDGQSAQQIVADKRYHHQFLPDVV
                     YVEDGVFDAQTSARLKAMGYTLKPREPWGFMNVVTWDHRTNTLDAASDPRHPDGLGKV
                     E"
     gene            501..1535
                     /locus_tag="VFM52_01525"
     CDS             501..1535
                     /locus_tag="VFM52_01525"
                     /inference="COORDINATES: protein motif:HMM:NF019404.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TMEM43 family protein"
                     /protein_id="HET8763876.1"
                     /translation="MRSLPISATQRRWLIHVGGAALLVLGALLALTTERDVVAYRATL
                     QQHGGAVIDLGHALEARGDLGGRMVRVVGTPRVVESPYDADFNQQVATPVLTRHVQMF
                     QWRELKLGGRATYEQDWAAAPQDSNRFQQPAGHHNPGAFPITGARFLAGKVTLGPYLL
                     DAALVRSLPGSEPVPPDARALPANLAATFAVHAGTLVSSSRPGAPQLGDLQVSWTAVP
                     VQEVTVLARVVGDHLVAVPNAANGVGYEVNIGDSSVLEMRPDMAAAPALPWVRRLLAL
                     LVAAIGAASIGWRAGMRLDARLAAGGGLLVGGAFAALPWFGASTGVAAAWIVLAVIGL
                     ALLVWRRRAS"
     gene            complement(1538..2107)
                     /locus_tag="VFM52_01530"
     CDS             complement(1538..2107)
                     /locus_tag="VFM52_01530"
                     /EC_number="3.6.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017463773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HET8763877.1"
                     /translation="MDPAAFPAPADAGAPTETLYAGRWLRLCKRGRWEYAERTNPAGA
                     AIIVAVTPADRVLFVEQYRVPIRAATIEMPAGLVGDLAGHEHEGILLAASRELEEETG
                     WRCGRVELLHQGPSSAGMSTEMIAFVRAFDLVKVGAGGGDATENIVVHEVPRTEAGAW
                     LFARAAEGYSIDPKLFAGLWLLEHGAPAK"
     gene            complement(2107..3108)
                     /locus_tag="VFM52_01535"
     CDS             complement(2107..3108)
                     /locus_tag="VFM52_01535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019464325.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenyl synthetase family protein"
                     /protein_id="HET8763878.1"
                     /translation="MNSIPADTSRPPDFAAVRALAEPDMLRIDALIRTRLASHVVLIN
                     QIADHIISSGGKRLRPMLHALAARAAGYRGDEHVKLAAVIEFIHTSTLLHDDVVDESG
                     LRRGKQTANALWGNAASVLVGDFLYSRSFQLMVELDDMRVMRILADTTNTIAEGEVLQ
                     LLNIGNADVDEAAYLAVIERKTAVLFAAATELGGLLGNLPGDQLAALRRFGMELGYAF
                     QIADDLLDYTGDAATLGKNIGDDLAEGKPTLPLIYTLQSASATEASALRAAIRHGGLD
                     SLEHVIHEIRASGALERTRQCALGHALAAHKALAALPASPWRDALATLADYSVQRNT"
     regulatory      3205..3305
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            3319..>3804
                     /locus_tag="VFM52_01540"
     CDS             3319..>3804
                     /locus_tag="VFM52_01540"
                     /EC_number="2.7.1.50"
                     /inference="COORDINATES: protein motif:HMM:NF014198.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004417 - hydroxyethylthiazole kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyethylthiazole kinase"
                     /protein_id="HET8763879.1"
                     /translation="MAHGAVADALAQLRGRVPLVQCLTNIVVANFTANVLLAAGASPA
                     MVDNPAEAAAFARLAGGVLVNLGTPYPDTTQAMAGAAASAAAASVPWVLDPVAAGVLG
                     WRTGIALELLAAHHPAIVRGNASEIMALGGGRGGRGVDALVGAEQALAPAAEIATRHA
                     TV"
BASE COUNT          540 a         1269 c         1407 g          588 t
ORIGIN      
        1 tcgccaacgg cacctgggtg ctgctcaacg acgaaacgga cgatttcgac ctggtgccgg
       61 acacgccgaa cgtgtacggc ctgctgggca gcaaggcgaa tgcgccgcag ggcggcaagc
      121 gcatgctctc ctcgatgtcg ccgacgatcg tgatcggcaa ggaccgcagc gcggtgatcg
      181 gctcgcccgg cggctccacc atcatcaccc aggtgttcga aggcatcatg catttcatcg
      241 atggccagag cgcgcagcag atcgtcgccg acaagcgcta tcaccatcag ttcctgcccg
      301 acgtggtgta cgtggaggat ggcgtgttcg acgcgcagac cagcgccagg ctcaaggcga
      361 tgggctacac gctcaagccg cgcgagccgt ggggcttcat gaacgtggtc acctgggatc
      421 accgcaccaa cacgctggat gcggcgagcg acccgcgcca ccccgacggc ctgggcaagg
      481 tggagtaagg gcgccacgtc gtgcgatccc ttccgatttc cgccacgcag cgccgctggc
      541 tgatccatgt cggcggcgcc gcattgctgg tgcttggcgc gctgctggcg ctgaccaccg
      601 agcgtgacgt cgtggcctat cgggcaacgc tgcagcagca cggcggagcg gtgatcgatc
      661 ttggccacgc gctggaggcg cgcggtgacc tgggaggacg catggtgcgc gtcgtcggca
      721 ccccgcgcgt ggtcgagtcg ccgtacgacg ccgacttcaa ccagcaggtc gcgacgccgg
      781 tgctgacccg gcatgtacag atgttccagt ggcgcgagct caagctcggc ggccgcgcaa
      841 cctacgagca ggactgggct gccgcaccac aggattcgaa ccgcttccag cagccggccg
      901 ggcaccacaa cccgggggcg tttcccatca ccggcgcgcg gttccttgcc ggcaaggtga
      961 cgctcggacc gtacctgctg gacgccgcgc tggtgcgctc gctgccgggc agcgagccgg
     1021 tgccgcccga tgcgcgtgca ttgccggcca acctcgcggc cacgtttgcc gtgcatgccg
     1081 gtaccctggt cagcagcagc cgcccgggtg cgccgcagct gggtgatctg caggtgagct
     1141 ggaccgcggt accggtgcag gaagtgacgg tgctggcccg ggtcgtgggt gaccatctgg
     1201 tggcggtgcc gaatgccgcc aatggggtcg gctacgaggt caatatcggc gacagctcgg
     1261 tgctggaaat gcgtcccgac atggcggcag cgccggcgct gccgtgggtg cggcgattgc
     1321 tggcgttgct ggtcgccgcg atcggggcgg cctcgatcgg ctggcgcgcc ggcatgcgtc
     1381 tagacgcgcg actggccgct ggcggcggcc tgcttgtggg cggggcattc gccgcactgc
     1441 catggtttgg cgcaagcacc ggtgtggcgg cggcgtggat cgtgctggca gtgatcggcc
     1501 tcgcgctgct ggtgtggcgg cggcgcgcca gctgaggtca ctttgccggg gcgccgtgct
     1561 ccagcagcca cagcccggcg aacagcttgg gatcgatcga ataaccttcg gcggcgcgcg
     1621 cgaacagcca ggcaccggct tccgtgcgcg gcacttcgtg caccacgatg ttctcggtcg
     1681 cgtcgccgcc gccggcgccg accttcacca ggtcgaaggc gcgcacgaag gcgatcatct
     1741 cggtgctcat gccggccgag gacgggccct ggtgcaggag ttccacgcgg ccgcagcgcc
     1801 agccggtttc ctcttccagc tcgcggctcg ccgccagcag gatgccttcg tgctcatggc
     1861 cggcaaggtc gccgacgaga ccggccggca tctcaatggt ggcggcccgg atcggcaccc
     1921 ggtactgctc gacgaacagc acccggtccg cgggcgtcac cgcgacgatg atggcggcgc
     1981 cggccgggtt ggtgcgctcg gcgtattccc agcggccgcg cttgcacagg cgcagccagc
     2041 gcccggcgta cagggtttcg gtcggcgccc ctgcgtcggc gggtgccggg aacgctgccg
     2101 ggtccatcac gtattgcgct gcacggagta gtcggcgagc gtggccagcg catcgcgcca
     2161 cggcgaggcg ggcagcgcgg cgagcgcctt gtgcgcggcc agggcgtggc ccagcgcgca
     2221 ttggcgggtg cgctcgagcg cgccggaggc gcggatctcg tggatgacgt gttcgagcga
     2281 gtcgagcccg ccatgcctga ttgcggcgcg cagcgcgctg gcttcggtcg cgctggcgct
     2341 ttgcagggtg tagatcaacg gcagcgtcgg cttgccttcg gccaggtcgt cgccgatgtt
     2401 cttgccgagc gtcgcggcgt cgccggtgta gtcgagcagg tcgtcggcga tctggaacgc
     2461 gtagccgagt tccatgccga accggcgcag cgcggcgagc tggtccccgg gcaggttgcc
     2521 gagcaggccg ccgagttcgg tcgcggccgc gaacagcacc gcggtcttgc gttcgatcac
     2581 cgcgaggtag gcggcctcgt ccacgtcggc attgccgatg ttgagcagct gcagcacctc
     2641 gccctcggcg atggtgttgg tggtgtcggc caggatgcgc atcacccgca tgtcgtccag
     2701 ctcgaccatc agctggaacg agcgcgagta caggaaatcc cccaccagca cgctggccgc
     2761 gttgccccac agcgcgttgg cggtctgctt gccacgccgc aggccggatt cgtcgaccac
     2821 gtcgtcgtgc agcagggtcg aggtgtggat gaactcgatc accgccgcga gcttcacgtg
     2881 ctcgtcgccg cggtagcccg ccgcccgcgc ggccagcgca tgcagcatcg ggcgcaggcg
     2941 cttgccgccg ctgctgatga tgtggtcggc gatctggttg atcagcacca cgtgcgacgc
     3001 cagtcgcgtg cggatcaagg cgtcgatgcg cagcatgtcg ggctcggcga gcgcacgtac
     3061 ggcagcgaaa tcgggcgggc gggacgtgtc ggcggggatt gaattcatgg gcgcagggct
     3121 ggtcgtcaac ccggaattat agggaatccg gccataccgc cgctggacgg gcttggcaac
     3181 cgccgcgcgg gacgattacc ctgcgcggca gacgcggggt gcctggggcg cgagcccggg
     3241 ctgagatcaa acccgttgaa cctgatctag accgtactag cgaagggacg tcatatgtcg
     3301 agactcgaag cgagccccgt ggcgcacggg gcggtggcgg atgcgctggc gcagttgcgc
     3361 gggcgggtgc cgctggtgca atgcctgacc aacatcgtgg tggcgaactt caccgccaac
     3421 gtgctgctgg ccgccggcgc cagcccggcc atggtggaca acccggccga ggccgcggca
     3481 tttgcgcggc ttgccggcgg cgtgctggtc aatttgggca cgccgtaccc ggacaccacg
     3541 caggcgatgg ccggcgcggc cgccagcgcc gccgcggcca gcgtgccgtg ggtgctcgac
     3601 ccggtcgcgg ccggcgtgct gggctggcgc accggcatcg cattggagct gctggcggcg
     3661 catcaccccg ccatcgtgcg cggcaacgca tcggagatca tggcgctcgg tggcgggcgc
     3721 ggcggccgtg gcgtggatgc gctcgtcggc gccgagcagg cgctggcccc cgcggcggaa
     3781 atcgcgacgc gccacgccac ggtg
//
LOCUS       DASSVL010000091         2725 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_524621, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000091 DASSVL010000000
VERSION     DASSVL010000091.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2725)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2725)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2725
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_524621"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..752
                     /gene="pyrD"
                     /locus_tag="VFM52_01545"
     CDS             <1..752
                     /gene="pyrD"
                     /locus_tag="VFM52_01545"
                     /EC_number="1.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007805838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004152 - dihydroorotate dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0009220 - pyrimidine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="dihydroorotate dehydrogenase (quinone)"
                     /protein_id="HET8763880.1"
                     /translation="PRMFRLPAHEAIINRLGFNNDGVDALVRHVEASRYRGVLGINIG
                     KNKDTPNERAADDYLTCLEHVYPRASYVTVNISSPNTKGLRDLQHEAALLRLIGTLRE
                     AQERLGSQSGARKPMLLKIAPDLAEPELDAVAGVLRATGIDGVICTNTTVDRAMVADD
                     PRGAETGGLSGQPLFALATDVLRGMRARLGPQVPIIGVGGIQSGADAAEKIRAGANLV
                     QLYSGLIYRGPCLVAECVDAIRALEGTHRAA"
     gene            763..1782
                     /gene="murB"
                     /locus_tag="VFM52_01550"
     CDS             763..1782
                     /gene="murB"
                     /locus_tag="VFM52_01550"
                     /EC_number="1.3.1.98"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007805835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008762 - UDP-N-acetylmuramate
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate dehydrogenase"
                     /protein_id="HET8763881.1"
                     /translation="MGGYALTENAPLAARNTLHVQAHARLLAELHDATKLPELLDFPA
                     VRAQPLLVLGEGSNLLLTRDFAGTVLAMATHGVQVEQAGDVTRIAVAAGERWDDFVRW
                     SLGQGFAGLENLIAIPGTVGAAPVQNIGAYGTEVAEFIESVEAWDTRERRVAVIAHAE
                     CAFGYRDSRFKREPGRYIVTAVRFALPRHRALRLDYAGMHEELARLGVDTPAPYHVAE
                     AVVRMRARKLPDPAVIGNAGSFFKNPIVDAEHAAALKAAHAGLPAWPQADGRVKLSAA
                     WMIDACGLKGRREGDAGISNRHALVMVNHGDATGPELWAFAQHVIATVATRFGVKLEP
                     EPVIV"
     gene            2004..>2725
                     /locus_tag="VFM52_01555"
     CDS             2004..>2725
                     /locus_tag="VFM52_01555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007080540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA degradosome polyphosphate kinase"
                     /protein_id="HET8763882.1"
                     /translation="MTTPEPATSPTAGPDLGDRRLYLNRELSQLAFNTRVLDQALDEH
                     TPLQERLKFLLIFSSNLDEFFEIRVAGLKSQIALDHELIGADGMTPAQVLAEIAVIAH
                     REVERQYAILNARILPALAAHDIRIARRDEWTHQQKLWVRHYFRTQVAPLVTPIGLDP
                     THPFPLLVNKSLNFIVRLDGVDAFGRDSGLAVVPAPRVLPRLIRMPDEVVAAGDVYVL
                     LSSIIHAHAGELFPGMTVLGSY"
BASE COUNT          429 a          989 c          906 g          401 t
ORIGIN      
        1 agccgcgcat gttccgcctg ccggcgcacg aggcgatcat caaccggctt ggcttcaaca
       61 acgacggcgt cgatgcactg gtgcgccatg tcgaggcgtc ccgctatcgc ggcgtgctcg
      121 gcatcaacat cggcaagaac aaggacacgc cgaacgagcg cgcggcggac gactacctca
      181 cctgcctcga acacgtgtac ccgcgggcga gctacgtcac ggtgaacatc tcctcgccga
      241 acaccaaggg cctgcgcgac ctgcagcacg aagccgccct gctgcgcctc atcggcaccc
      301 tgcgcgaggc gcaggagcgg ctcggttcgc agtccggcgc gcgcaagccg atgctgctca
      361 agatcgcgcc cgacctggcc gagccggaac tggacgccgt cgccggcgtg ctgcgcgcca
      421 ccggcatcga cggcgtgata tgcaccaaca ccacggtgga tcgcgccatg gtcgccgacg
      481 acccgcgcgg cgccgagacc ggtggcttgt cgggccaacc gctgttcgcg ctggccaccg
      541 atgtgctgcg cggcatgcgc gcgcggctcg ggccgcaggt gccgatcatc ggcgtcggcg
      601 gcatccagag cggcgccgac gccgcggaaa aaatccgtgc cggcgcgaac ctcgtgcagc
      661 tgtattccgg cctcatctac cgcgggccgt gcctcgtcgc cgaatgcgtc gacgcgatcc
      721 gcgccctcga aggaacccac cgtgccgctt gaacccgtcc cgatgggcgg ctacgcgctc
      781 accgagaacg cgccgctcgc cgcccgcaac acgctgcacg tgcaggccca cgcgcgcctg
      841 ctcgccgagc tgcacgacgc caccaagctg cccgagctgc tcgactttcc cgcggtgcgc
      901 gcgcagccgc tgctggtgct gggcgaaggc agcaacctgc tgctcacgcg cgatttcgcc
      961 ggcaccgtgc tggcgatggc cacccacggc gtgcaggtgg aacaggcagg cgacgtcacc
     1021 cgcatcgcgg tcgccgctgg cgagcgctgg gacgacttcg tgcgctggtc gctcggccag
     1081 ggtttcgccg ggctggaaaa cctgatcgcc atccccggca ccgtcggcgc tgccccggtg
     1141 cagaacatcg gcgcctacgg caccgaggtc gccgagttca tcgagagcgt cgaggcctgg
     1201 gacacgcgcg agcgacgcgt cgccgtcatc gcccacgccg agtgcgcgtt cggctaccgc
     1261 gactcgcgtt tcaagcgcga gccggggcgc tacatcgtca ccgccgtgcg tttcgccctg
     1321 ccccgccacc gcgccttgcg gctggattac gccggcatgc acgaggagct ggcgcggctt
     1381 ggcgtcgaca ccccggcgcc gtaccacgtg gccgaggccg tggtgcgcat gcgcgcccgc
     1441 aagctgccgg acccggcggt gatcggcaac gccggcagct tcttcaagaa cccgatcgtc
     1501 gacgccgaac acgccgccgc gctcaaggcc gcgcacgccg gactaccggc atggccgcag
     1561 gcggacggcc gggtgaagct ttccgccgca tggatgatcg acgcctgcgg actcaagggc
     1621 cgccgcgagg gcgacgccgg catttccaat cgccatgcgc tggtgatggt caaccacggc
     1681 gatgcgaccg ggccggagct gtgggccttc gcgcagcacg tgatcgccac tgtcgcgaca
     1741 agattcggcg tgaagctgga acccgagccg gtcatcgtgt aatcccggga tcaagcggaa
     1801 acgtcgcctg gaattggaac cgccgctgtt gtaagagccc gcttgcgggc gatgccgttg
     1861 ccttgatgct ggccgaagtg catcgcccac aagcgggctc ctgcagctga cgcattgacg
     1921 ccacaggtgc gcgacaggtg acgccttggc gtcacgggtg cgcgctacca tcggtacatg
     1981 cgccgcttgc ctatctcgtg acgatgacga cacccgaacc cgcgacctcg ccgacagcag
     2041 gccccgacct cggtgaccgc cgcctgtacc tcaaccgcga actgtcgcag ctggcgttca
     2101 acacgcgcgt gctcgaccag gcgctggacg aacacacgcc gctgcaggag cgcctgaagt
     2161 tcctgctgat cttctccagc aacctcgacg agttcttcga gatccgcgtg gccgggctca
     2221 agagccagat cgcgctcgat cacgagctga tcggtgccga cggcatgacg ccggcgcagg
     2281 tgctggcgga gatcgcggtc atcgcgcacc gcgaggtgga acgccagtac gccatcctca
     2341 atgcgcgcat cctgccggcg ctggccgcgc acgacatccg catcgcgcgg cgcgacgagt
     2401 ggacgcacca gcagaagctc tgggtgcgcc attacttccg cacccaggtc gcgccgctgg
     2461 tgaccccgat cgggctcgac ccgacccatc cgtttccgct gctggtcaac aagagcctga
     2521 acttcatcgt gcggctggat ggcgtggatg ccttcggccg cgattcgggc ctggcggtgg
     2581 tgccggcgcc gcgcgtgctg ccgcggctga tccgcatgcc ggacgaggtg gtggcggccg
     2641 gcgacgtcta cgtgctgctg tcctcgatca tccacgccca tgcgggcgag ctgttccccg
     2701 gcatgacggt gctcggcagc tacca
//
LOCUS       DASSVL010000092         3462 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_30254, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000092 DASSVL010000000
VERSION     DASSVL010000092.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3462)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3462)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3462
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_30254"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            82..1707
                     /locus_tag="VFM52_01560"
     CDS             82..1707
                     /locus_tag="VFM52_01560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018973160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HET8763883.1"
                     /translation="MLRLTDLKLPLDHAEDALPAAACAALGIPRSALRKLTVARRGYD
                     ARRRGHITLIYTVDVELADEPALLARHAGDRHLQATPDTGYRFVARAPEHLEHRPLVI
                     GFGPCGIFAALILAQSGFRPIVLERGKAVRERTRDTWDLWRKRELHPDSNVQFGEGGA
                     GTFSDGKLHSQIRDPQHHGRKVLEEFVKAGAPEEILYVSKPHIGTFRLVTMVQSLRAS
                     IEALGGEIRFGARVDDLLVDTDAHGGRHVRGVHLADGSTLRSDHVVLAPGHSARELFT
                     LLDARGVHLEAKPFSIGFRIEHPQSLIDRARFGPQAGHPVLGAADYHLVHHLGNGRSV
                     YSFCMCPGGTVVAATSEPGRVVTNGMSQYSRSERNANAAIVCDIAPADYAAYGSGPLA
                     GIALQRHWESHAYQLGGGDYIAPAQRVGDFLAGRATHGLGDVTPSYQPGVHLTDLSTA
                     LPDYAVAAIRSAIPAFERQIRGYALPDAMLTGVETRTSSPVRIRRNDGDLQSVNTRGL
                     YPAGEGAGYAGGILSAAVDGIRVAEAVALAITA"
     gene            complement(1913..2611)
                     /locus_tag="VFM52_01565"
     CDS             complement(1913..2611)
                     /locus_tag="VFM52_01565"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008216818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HET8763884.1"
                     /translation="MPMLETAPPATAGAHAPTSRVVLFDFDGVLLHGDAFNLFIRSRY
                     TRSWWRGVLALPCVPWLVVMLPFSRRLAARTLVHVALFGVGARRYRALAAAFAVELVR
                     HSRRFCRDGLRQLRHHQQAGDRVIVVTGCAEALVGAIMRELGLGEVELYASRLRPTWL
                     GMRTGFHNIGANKLKVLAEHGVREWRCAYTDALQDAPMLKIAAEPVLVNGTPKLCKKM
                     DAVLGRVVGRVAWH"
     gene            complement(2617..3411)
                     /gene="trpC"
                     /locus_tag="VFM52_01570"
     CDS             complement(2617..3411)
                     /gene="trpC"
                     /locus_tag="VFM52_01570"
                     /EC_number="4.1.1.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019465852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004425 - indole-3-glycerol-phosphate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0006568 - tryptophan metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="indole-3-glycerol phosphate synthase TrpC"
                     /protein_id="HET8763885.1"
                     /translation="MTDILNRILARKAEEVAERKARQPLAELVARMADLPDTRGFAAA
                     IEARINAGKPAVIAEVKKASPSKGVIRPDFDPAAIAKSYAHGGATCLSVLTDADFFQG
                     SEAFLQQAREACKLPVLRKDFVIDPYQVHEARVIGADCILLIVAALDDDVLLELSLQA
                     AELDLDVLCEVHDEEELERAQALPVPLIGVNNRNLRNFETSIETSLQLQEQMEYDRIL
                     VAESGIRTPEDVARLRAGGINAFLVGEAFMRAEDPGAELKRLFATK"
BASE COUNT          534 a         1275 c         1147 g          506 t
ORIGIN      
        1 tccgttcgcg ggaggggcga ttttgtcggg gagccggcgc gatctgcgag aatcgccgca
       61 tcgcttccat ccgcgcccgc catgcttcgc ctcaccgacc tcaagctgcc gctcgaccac
      121 gccgaggacg ccctgcccgc cgctgcatgc gccgcgctgg gcatcccgcg cagcgccctg
      181 cgcaagttga cggtggcgcg gcgcggctac gatgcgcgcc ggcgcgggca catcacgctg
      241 atctacaccg tcgacgtcga actcgccgac gagccggcgc tgcttgcgcg gcacgccggc
      301 gaccgccacc tgcaggccac gccggacacc ggctaccgct tcgtggcccg tgcgccggag
      361 cacctcgaac accggccgct ggtgatcggc ttcggaccat gcggcatctt cgcggcgctg
      421 atcctggcgc aatccggctt ccgcccgatc gtgctcgaac gcggcaaggc ggtgcgcgag
      481 cgcaccaggg acacctggga tttgtggcgc aagcgcgagc tgcatcccga ctccaacgtg
      541 cagttcggcg agggcggcgc cggcacgttt tccgacggca agctgcacag ccagatccgc
      601 gacccgcagc accacggccg caaggtgctg gaggaattcg tcaaggccgg cgcaccggag
      661 gaaatcctct acgtcagcaa gccgcacatc ggcaccttcc ggctggtgac gatggtgcag
      721 agcctgcgcg cgtcgatcga ggcgctgggc ggcgagatcc gcttcggtgc gcgcgtggac
      781 gatctcctcg tcgacaccga tgcacacggc gggcgccacg tgcgcggcgt gcacctggcc
      841 gacggcagca cgctgcgcag cgaccacgtc gtgctcgcgc ccggccacag cgcgcgtgag
      901 ttgttcacgc tgctcgacgc ccgcggcgtg cacctcgaag ccaagccgtt ctcgatcggc
      961 ttccgcatcg agcacccgca atcgctgatc gaccgcgcgc gcttcggtcc gcaggccgga
     1021 catccggtgc tcggcgccgc cgactatcac ctggtgcatc acctcggcaa cggccgctcg
     1081 gtatacagct tctgcatgtg ccccggcggc actgtggtcg ccgccaccag cgagcccggt
     1141 cgggtggtga ccaacggcat gagccagtac tcgcgcagcg agcgcaacgc caacgcggcg
     1201 atcgtgtgcg acatcgcgcc cgccgattac gccgcctacg gcagcggccc gctggctggc
     1261 atcgcgctgc agcggcactg ggagtcgcac gcgtaccagc tcggcggcgg cgactacatc
     1321 gcgccggcgc agcgcgtcgg cgatttcctc gccggccgcg cgacgcacgg actcggcgac
     1381 gtcacgccgt cctaccagcc cggcgtgcac ctcaccgacc tgtccaccgc gctgcccgac
     1441 tatgcggtcg cggcgatccg cagcgcgatc cccgcgttcg aacgccagat ccgtggctac
     1501 gccttgcccg acgccatgct gaccggtgtc gagacccgca cttcctcgcc ggtgcgcatc
     1561 cgccgcaacg acggcgacct gcaaagcgtg aacacccgcg ggctgtaccc cgccggcgaa
     1621 ggggccggct acgccggcgg catcctctcc gccgccgtgg acggcatccg cgtggcggaa
     1681 gccgtggcgc tggcaatcac cgcgtagggc gcgctcgcgg gcgatcccgc cacctcgtat
     1741 cgcccgcggc ttcccccgaa aacgcggccg gcctcgcgtc gggtggccac gggctccaac
     1801 gtccagggag cgtgctcgcg ggcgatgctc ctgttcggat gcctgtcgcg gcgcaagcat
     1861 cgtccgcaag cgggctccct cagggatgcg aacgtgaatc gcgaggcatg gctcaatgcc
     1921 acgccacccg cccgaccacg cggcccagta ccgcatccat cttcttgcac agcttcggcg
     1981 tgccgttgac cagcaccggc tcggccgcga ttttcagcat cggcgcatcc tgcaaggcgt
     2041 cggtgtatgc gcagcgccac tcgcgcacgc catgttcggc gagcaccttg agcttgtttg
     2101 cgccgatgtt gtggaatccg gtgcgcatgc cgagccaggt cgggcgcagg cgcgaggcat
     2161 acaactcgac ttcgcccagc ccgagctcgc gcatgatcgc gcccaccagc gcttccgcgc
     2221 agccggtgac cacgatcacg cggtcgccgg cctgctggtg gtggcgcaac tggcgcaggc
     2281 catcgcgaca gaaccgccgc gaatggcgca ccagttccac cgcaaaggcg gccgccagcg
     2341 cgcgatagcg ccgcgcgccc acgccgaaca aggcgacatg caccagcgta cgcgcagcga
     2401 gccggcgcga gaaaggcagc atcacgacga gccacggcac gcacggcagc gccagcacac
     2461 cgcgccacca cgaccgcgtg tagcggctgc ggatgaacag gttgaacgca tcgccgtgca
     2521 gcagcacgcc gtcgaaatcg aacagcacca cgcgcgacgt cggcgcgtgc gcgccggccg
     2581 tcgccggcgg cgcggtttcc agcatgggca tgggtttcac ttcgtggcaa acagccgttt
     2641 cagctcggca ccgggatcct cggcgcgcat gaaggcctcg ccgacgagga acgcgttgat
     2701 gccgccggcg cgcaggcgcg ccacgtcttc cggcgtgcgg atgccggact cggcaaccag
     2761 gatgcggtcg tattccatct gctcctgcaa ttgcagcgaa gtctcgatcg aggtctcgaa
     2821 attgcgcagg ttgcgattgt tgacgccgat cagcggcacc ggcagcgcct gcgcgcgttc
     2881 gagttcctcc tcgtcgtgca cctcgcacag cacgtcgagg tcgagctcgg cggcctgcag
     2941 cgacagctcc agcagcacgt cgtcgtcgag cgcggcgacg atcagcagga tgcaatcggc
     3001 gccgatcacg cgcgcctcgt gcacctgata ggggtcgatg acgaaatcct tgcgcagcac
     3061 cggcagcttg cacgcctcgc gcgcctgctg caggaacgcc tcgctgccct ggaagaaatc
     3121 ggcgtcggtc agcaccgaaa ggcaggttgc gccaccgtgc gcgtagctct ttgcaatcgc
     3181 cgccggatcg aaatccgggc ggatcacgcc cttgctcggg ctggccttct tgacctcggc
     3241 gatcaccgcc ggcttgccgg cgttgatccg ggcctcgatc gccgccgcga aaccacgcgt
     3301 gtcgggcagg tccgccatgc gcgctaccag ctccgccagc ggctgccgtg ccttgcgctc
     3361 ggcgacttct tccgccttgc gggcgaggat gcgattgagg atgtcggtca tgggcgtcat
     3421 cggatgcaag ggccaaggca tcgtggcgac gccggcgtcg tc
//
LOCUS       DASSVL010000093         4193 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_652085, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000093 DASSVL010000000
VERSION     DASSVL010000093.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 4193)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4193)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4193
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_652085"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..939
                     /gene="groEL"
                     /locus_tag="VFM52_01575"
     CDS             <1..939
                     /gene="groEL"
                     /locus_tag="VFM52_01575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005411226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chaperonin GroEL"
                     /protein_id="HET8763886.1"
                     /translation="ILEGVAKAGKPLLIVAEEVEGEALATLVVNTIRGIVKVAAVKAP
                     GFGDRRKAMLQDMAILTKGQVISEEVGLQLEKATINDLGHAKKVVVTKENTTIIDGAG
                     EAEKIEARIKQIKKQIEETTSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKAR
                     VEDALHATRAAVEEGVVPGGGVALIRALKAVEGLKGDNEDQNLGIQITRRALEAPLRE
                     IVANAGEEPSVVLNQVKEGKGNYGYNAATGEFGDMIAFGILDPTKVTRSALQYASSVA
                     GLAITTEAVVAELPKKEEHNHGGAPGMGGMGGGMDF"
     gene            1022..1285
                     /locus_tag="VFM52_01580"
     CDS             1022..1285
                     /locus_tag="VFM52_01580"
                     /inference="COORDINATES: protein motif:HMM:NF016268.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BrnT family toxin"
                     /protein_id="HET8763887.1"
                     /translation="MHYEADPAKAASNLAKHGVGFDEAASCLLDPMALAMQDDGEGEP
                     RWVLVGCSERGRVLTVVYTMRGDVPRLISAREATVRERTSYEN"
     gene            1275..1547
                     /locus_tag="VFM52_01585"
     CDS             1275..1547
                     /locus_tag="VFM52_01585"
                     /inference="COORDINATES: protein motif:HMM:NF025742.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BrnA antitoxin family protein"
                     /protein_id="HET8763888.1"
                     /translation="MKTEYDMSRAKRAKDVPHLKKLQEAAGSGKTRISIMLDDAVIAG
                     FRARAAADGTAYQTEINRALREALQAEAPVTLKALRQVIREELRSA"
     gene            complement(1678..2007)
                     /locus_tag="VFM52_01590"
     CDS             complement(1678..2007)
                     /locus_tag="VFM52_01590"
                     /inference="COORDINATES: protein motif:HMM:NF024949.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HET8763889.1"
                     /translation="MTSALADIQTIKGPDGTPAFVVVPYAEFVRRFAGDEGLIPHEVV
                     SATVDGASPMKAWHEHPGLTQAEVAGRLGVSQAAYAQTEAAAHPRKTTVARVAAALRL
                     AVEQLGF"
     gene            complement(1988..2179)
                     /locus_tag="VFM52_01595"
     CDS             complement(1988..2179)
                     /locus_tag="VFM52_01595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8763890.1"
                     /translation="MSVDEAVWHVPPKFPACNGVKALVNHAHGYRLRVGNYRVLFDFE
                     GSIRLVSIEEVSKRDERTC"
     gene            complement(2183..4126)
                     /locus_tag="VFM52_01600"
     CDS             complement(2183..4126)
                     /locus_tag="VFM52_01600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008439342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LTA synthase family protein"
                     /protein_id="HET8763891.1"
                     /translation="MTSAFPAHFRHPLPRVALALVMALAFVLLTGLVDGGEGVLPGRL
                     LDQARYPLANALPGLLLAGLLLVMTRRLLLSFGLALLAQAVFYAVNMLKVANLGTPLL
                     PADFRMVGQLRRGGFHLLAGYLPSSPWPWLAVLALVALVALVWRFEPALFPRHTRGRR
                     LAAGGVLTMALGSLLGGWTGWTRLYNGGTLWLEPWSADATRVHSGLISELMLFRLHFG
                     QHAPKPDHALAAQLIDRYAPALRERLQLPTAAVLPDIVVVQSESFFDPRILRGFEHAD
                     LTPNLDRLAAHGTRGALHVPTFGGGTIRTEFEVLTGLSLRYFDNLQFPYLQMNHKEVP
                     SMVRTLAAHGYATTALHGNDPAFWNRSTAFKALGFQHFVSQAAFPADAPNDGKYMADR
                     AMTDAIVATLKPDGPPQFVFAISIEGHGPNDVEPADPAARDAIAIPASITGDARRELQ
                     TYLYHLAHADAELGRLADLLARRERPTLLLFYGDHLPGLADAFRAAGFVDGGDMLSQP
                     GTWLLVEPQTPGKATREDTAAWLLPGQLLAAAGIHDAAYYALTDLAGPPLATLTRAPG
                     ATQPTISIATANLDTAMASAERLQLKHKLAPMIAEVLGGEPESMQLAHDAQPLGRRQM
                     LAAPMLPPAADAAVSPRCDGQRC"
BASE COUNT          719 a         1318 c         1551 g          605 t
ORIGIN      
        1 atcctcgagg gcgtcgccaa ggctggcaag ccgctgctga tcgtggcgga agaggtcgag
       61 ggcgaggcgc tggccacctt ggtggtcaac accatccgcg gcatcgtcaa ggtggccgcc
      121 gtcaaggcgc cgggcttcgg cgatcgccgc aaggcgatgc tgcaggacat ggccatcctc
      181 accaagggcc aggtcatttc cgaggaagtc ggcctgcagc tggagaaggc caccatcaac
      241 gaccttggcc atgccaagaa ggtcgtggtg accaaggaaa acaccaccat catcgacggt
      301 gccggcgaag ccgagaagat cgaagcgcgc atcaagcaga tcaagaagca gatcgaggag
      361 accacctccg actacgatcg cgagaagctg caggagcgtg tcgcgaagct ggctggcggc
      421 gtggcggtga tcaaggtcgg tgccgcgacc gaagtcgaga tgaaggaaaa gaaggcgcgc
      481 gtcgaagacg ccctgcacgc gacccgtgcg gcggtggaag aaggcgtggt ccccggcggc
      541 ggcgtggcgc tgatccgtgc gctcaaggcg gtcgaaggcc tgaagggtga caacgaagac
      601 cagaacctcg gcatccagat cacccgccgc gcgctggaag cgccgctgcg cgagatcgtc
      661 gccaatgccg gcgaagagcc gtccgtcgtg ctgaaccagg tcaaggaagg caagggcaac
      721 tacggctaca acgccgccac cggcgagttc ggcgacatga tcgcgttcgg catcctggac
      781 ccgaccaagg tcacccgttc ggcgctgcag tacgcctcct ccgtcgccgg cctggcgatc
      841 acgaccgaag cggtcgtggc cgagctgccg aagaaggaag agcacaacca cggtggcgcc
      901 ccgggcatgg gcggcatggg cggcgggatg gatttctgat ccacgctttc cctgtttcac
      961 gcaacacgaa aaaccccgct tcggcggggt tttttcgtat gcatgtgata tatattagtg
     1021 cgtgcactac gaggccgatc ccgcaaaagc cgcaagcaac ctcgccaagc acggcgtggg
     1081 tttcgacgag gcggccagct gcctgctcga tccgatggcg ctggccatgc aggatgacgg
     1141 cgaaggcgaa ccccgctggg tactggtggg gtgcagtgag cgtggacggg tgctgacggt
     1201 ggtgtacacg atgcgtggcg acgtgccgcg cctgatatcg gcccgcgagg ccacggtacg
     1261 agagaggacc agctatgaaa actgagtacg acatgagccg ggcgaaacgg gccaaggatg
     1321 tgccgcatct caagaagctg caggaggccg ccggcagcgg caagacgcgc atttcgatca
     1381 tgctggacga tgccgtgatc gccgggttcc gcgcgcgcgc ggccgccgac ggcaccgcct
     1441 accagaccga gatcaaccgt gccctgcgcg aggccttgca ggccgaggcg ccggtgacgt
     1501 tgaaggcctt gcggcaggtg attcgagagg aattgcgctc ggcgtgatgc cggccgtact
     1561 tggcagaggc tggccgcttg ccggcttatc catggacgat ggcgtcgtct tccccgcctg
     1621 cttggagcgt ttctgacact cggccgaggg gaagggtctt gaggtgcatg ggcagcctca
     1681 aaaacccagc tgttccacgg caagccgcag tgcagcggcg acgcgggcga cagtggtctt
     1741 gcgcgggtgg gcggcggctt cggtctgcgc gtacgcggct tgcgacacgc cgaggcggcc
     1801 cgccacttcg gcctgcgtga gcccagggtg ttcatgccat gccttcatgg ggctggcccc
     1861 gtccaccgtg gcgcttacca cctcgtgcgg gatcaggcct tcgtcgccgg caaagcgtcg
     1921 aacgaactcg gcgtacggaa cgaccacgaa cgcgggcgtg ccgtccggcc ccttgatcgt
     1981 ttggatatca gcaagtgcgc tcgtcacgtt tgctcacctc ttcgatgctg accagcctga
     2041 tcgaaccttc gaagtcgaac agcacccgat agttgcccac ccgcaaacgg tagccgtgcg
     2101 cgtggttcac cagcgccttg acgccgttgc acgccggaaa cttcggcggc acgtgccaca
     2161 cggcttcgtc gacggacaac gctcagcagc gctgcccgtc gcaacggggg ctgaccgcgg
     2221 catccgcggc gggaggcagc atgggggcgg cgagcatttg acggcgcccc agtggctgcg
     2281 catcgtgcgc cagctgcatc gactcgggtt cgccgcccag tacttcggcg atcatcggcg
     2341 cgagcttgtg cttgagctgc agtcgctcgg cgctggccat ggcggtgtcg aggttggcgg
     2401 tggcgatgga aatcgtcggc tgggtggcgc cgggcgcgcg ggtgagcgtg gccaggggcg
     2461 ggccggcgag gtcggtgagc gcgtagtagg cggcgtcgtg gatgccggcg gcggccagga
     2521 gctggcccgg cagcagccac gcggcggtgt cctcgcgggt ggccttgccg ggggtttgcg
     2581 gctccaccag gagccaggtg ccgggctggc tcagcatgtc gccgccgtcg acgaagccgg
     2641 cggcgcggaa cgcatcggcc aggccgggca ggtggtcgcc gtagaacagc agcagcgtgg
     2701 ggcgctcgcg ccgggcgagc aggtcggcca gccggcccag ttcggcgtcg gcgtgggcaa
     2761 ggtgatacag gtaggtctgc agctcgcggc gtgcgtcgcc ggtgatgctg gcggggatgg
     2821 cgatggcgtc gcgcgcggcg gggtcggcgg gctccacgtc gttgggcccg tggccctcga
     2881 tgctgatggc gaacacgaac tgcggcgggc cgtcgggctt gagcgtggcc acgatggcat
     2941 cggtcatcgc ccggtcggcc atgtacttgc cgtcgttcgg cgcatccgcc gggaacgcgg
     3001 cctgcgacac gaagtgctga aaccccagcg ccttgaacgc ggtgctgcgg ttccagaacg
     3061 ccgggtcgtt gccgtgcagc gcggtggtgg cgtagccgtg cgccgccagc gtgcgcacca
     3121 tgctcggcac ctccttgtgg ttcatctgca ggtacggaaa ctgcaggttg tcgaagtagc
     3181 gcagcgaaag cccggtcagc acctcgaact cggtgcggat ggtgccgccg ccgaaagtgg
     3241 gcacgtgcag cgcgccgcgc gtgccgtgcg cggcgaggcg gtcgaggttg ggcgtgaggt
     3301 cggcatgctc gaagccgcgc aggatgcgcg ggtcgaagaa cgattcgctc tgcaccacca
     3361 cgatgtccgg cagtaccgcg gcggtgggca gctgcaggcg ttcgcgcagt gccggggcgt
     3421 agcggtcgat cagttgcgcg gccagcgcgt ggtcgggctt gggtgcgtgc tgcccgaagt
     3481 gcaggcggaa cagcatcagc tcactgatga ggccggagtg cacgcgggtg gcgtcggccg
     3541 accacggctc cagccacagc gtgccgccgt tgtagagccg ggtccaaccg gtccagccgc
     3601 cgagcaggct gcccagcgcc atcgtcagca cgccaccggc cgccagccgc cggccgcgcg
     3661 tgtggcgggg gaacagtgcc ggttcgaagc gccacaccaa ggccaccagt gcgaccagcg
     3721 cgagcacggc cagccacggc cacggactgc tcggcaggta gccggccagc aggtggaatc
     3781 cgccgcggcg cagctggccc accatgcgga aatcggccgg cagcaagggg gtgccgaggt
     3841 tggcgacctt gagcatgttg accgcgtaga acacggcttg cgcgagcaac gcgaggccga
     3901 acgacagcag cagccgccgc gtcatcacca gcagcagccc ggccagcagc agcccgggca
     3961 gcgcgttggc cagcgggtag cgggcctgat ccagcagccg ccccggcagc acgccttcgc
     4021 cgccgtcgac gaggccggtg agcagcacga aggccagggc catcaccagc gccagcgcga
     4081 cgcgcggcag cggatggcgg aagtgggcgg ggaaagcgga ggtcatggca gtaccggtcg
     4141 tgcaggcagg cgcggtgtca tgaagcgaag ggtcagcgta acggcgcgga cat
//
LOCUS       DASSVL010000094         2488 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_242205, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000094 DASSVL010000000
VERSION     DASSVL010000094.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2488)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2488)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2488
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_242205"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1125)
                     /locus_tag="VFM52_01605"
     CDS             complement(<1..1125)
                     /locus_tag="VFM52_01605"
                     /EC_number="6.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015448887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004357 - glutamate-cysteine ligase
                     activity [Evidence IEA];
                     GO_process: GO:0006750 - glutathione biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--cysteine ligase"
                     /protein_id="HET8763892.1"
                     /translation="MSIASTIESTPIEGRQQLLDYLAAGEKPAEHWRIGTEHEKFGFR
                     TDDLRPPTYEGERGIRALLEGIAARHGWSAISENGNPIALTRDKANITLEPAGQLELS
                     GAPLETIHQTCCEVNTHLAEVRSVAEPLGLGFLGMGFQPKWRRDEMPWMPKGRYRIMR
                     DYMPKVGKLGLDMMTRTCTVQVNLDFGSEADMVEKFRVGLALQPIATALFADSPFTEG
                     RPNGYQSLRSHIWEDTDPDRTGMLDFVFEDGFGYERYLDYILDVPMYFSDQASGYVDL
                     AGEDFKRFLKGELPQLPGVKATMRDFADHLTTAFPEVRLKQYLEMRGADGGPWNRLCA
                     LPALWVGLLYDQGALDAAWDLVKHWSMEEREALRNAVPKLG"
     gene            complement(1234..>2488)
                     /locus_tag="VFM52_01610"
     CDS             complement(1234..>2488)
                     /locus_tag="VFM52_01610"
                     /inference="COORDINATES: protein motif:HMM:TIGR01845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="efflux transporter outer membrane subunit"
                     /protein_id="HET8763893.1"
                     /translation="DDLVARALRDSPTLGAAEARLREAGANQAAQAGTTYLPRVDAGA
                     GAQRQRFNPNLLGQAGTPREFDLYTANVGVHYRLDLGGGNRRALEALAARTDYQRYRL
                     AAARLTLAASVVSAAITRAQLADQITATEALLRDQDARVTLLHAQLRLGHVAPDALAA
                     LQTEVEQSRAGLPALQQAFDQAGHLLAVLTGQSPATATLPALTLADLHLPRELPVVVP
                     SELVRRRPDIGAAEALLHAATADYGVAVAKAYPQLDLSASLGSQALSTGALFGSGAAV
                     WSLLGQLTQPLFDPALPAKKRAALAAVDAAGANYQGVVLDALREVADALRASQHDAET
                     AAALQAADAAARDHLAITTSRHALGVAASDELLQARIGAARARLQFDAGRGARLASTL
                     RLFQAMGNGQPPAGMSPDAPLAAAP"
BASE COUNT          325 a          834 c          928 g          401 t
ORIGIN      
        1 gccgagcttg gggaccgcgt tgcgcaaggc ctcgcgctct tccatcgacc agtgcttgac
       61 gaggtcccac gcggcgtcga gtgcgccctg gtcgtagagc aggccgaccc acagcgcggg
      121 cagcgcgcac agccggttcc acgggccgcc gtcggcgccg cgcatttcca ggtattgctt
      181 gaggcggact tcggggaacg cggtggtgag gtggtcggcg aaatcgcgca tcgtcgcctt
      241 cacgccaggc agctgcggca gctcgccctt caggaagcgc ttgaaatcct cgccggcgag
      301 gtcgacgtag ccgctggcct ggtcgctgaa atacatcggc acatcgagga tgtagtcgag
      361 gtagcgctcg tagccgaagc cgtcctcgaa cacgaaatcg agcatgccgg tgcggtccgg
      421 gtcggtgtcc tcccagatgt gcgagcgcag cgactggtag ccgttcggcc ggccctcggt
      481 gaacggcgaa tcggcgaaga gggcggtggc gatcggctgc agtgccaggc cgacgcggaa
      541 tttctccacc atgtcggctt ccgagccgaa gtccaggttg acctgcaccg tgcaggtgcg
      601 cgtcatcatg tccaggccaa gcttgccgac cttgggcatg tagtcgcgca tgatgcggta
      661 gcgccctttc ggcatccacg gcatctcgtc gcgccgccac ttgggctgga agcccatgcc
      721 gaggaagccg aggccgagcg gctcggcgac cgagcgcact tcggcgagat gggtgttcac
      781 ctcgcagcat gtctggtgga tggtctccag cggcgcaccg gagagctcga gctggccggc
      841 gggttccagc gtgatgttgg ccttgtcgcg ggtcagcgcg atcgggttgc cgttctcgct
      901 gatcgcgctc cagccgtggc gcgcggcgat gccttcgagc agcgcgcgga tgccgcgctc
      961 gccctcgtag gtcggcgggc gcaggtcgtc ggtgcggaag ccgaatttct cgtgctcggt
     1021 gccgatgcgc caatgttccg ctggcttctc accggccgcg aggtaatcaa gcagttgctg
     1081 gcgcccttcg atcggggtgc tttcgatggt gctggctatg gacacgcgcg tcgccttgct
     1141 gatccgatcc cacgactatg gaggcgcacg cgatcgacga aaagggcttg accgaaaata
     1201 tttgtacgcg tgagtacagt gatttgacgc ggatcatggc gcggccgcca gtggcgcgtc
     1261 ggggctcatt cccgccggcg gctggccgtt gcccatggcc tggaacagcc gcagcgtgct
     1321 ggcgaggcgg gcgccgcggc cggcgtcgaa ctgcaggcgc gcgcgggcgg cgccgatccg
     1381 ggcctgcagc aactcgtcgc ttgcggcgac ccccagcgcg tgacggctgg tggtgatcgc
     1441 caggtggtcg cgggccgcgg cgtcggctgc ctgcagcgcg gcggccgttt ccgcgtcgtg
     1501 ctggctggcg cgcagcgcgt cggcgacttc gcgcagcgca tccagcacca cgccctggta
     1561 gttggcgccg gccgcgtcga ccgccgccag cgccgcgcgc tttttcgccg gcagcgcggg
     1621 gtcgaacagc ggctgggtca gctgcccgag caggctccat accgccgcgc cactgccgaa
     1681 aagcgcgccg gtgctgagcg cctgcgaccc caggctggcg ctgaggtcga gctgcgggta
     1741 ggccttggcg acggcgacgc cgtaatcggc cgtggcggcg tgcagcagcg cttcggcggc
     1801 gccgatgtcg gggcggcggc gcacgagttc ggagggcacc accaccggca gctcgcgcgg
     1861 caggtgcagg tcggccagcg tcagcgccgg aagcgtcgcc gtggccggcg actgcccggt
     1921 gagcaccgcc agcaggtgtc cggcctggtc gaacgcctgc tgcagcgccg gcaggccggc
     1981 acgactttgc tccacttcgg tctgcagtgc cgccagcgca tccggcgcca cgtggcccag
     2041 gcgcagctgc gcgtgcagca gggtgacgcg cgcgtcctgg tcgcgcagca acgcttccgt
     2101 tgccgtgatc tggtccgcga gttgcgcgcg ggtgatcgcc gcactgacga cgctggccgc
     2161 cagcgtcagg cgcgccgccg cgagccggta gcgctggtag tcggtgcgtg ccgccagcgc
     2221 ttccagcgcg cgccggttgc cgccgcccag atcgagccgg taatgcacgc cgacattggc
     2281 ggtgtacagg tcgaactcgc gtggcgttcc cgcctggccg agcaggttgg ggttgaagcg
     2341 ctggcgttgc gcgccggcgc cggcgtcgac gcgcggcagg taggtggtgc cggcctgcgc
     2401 cgcctggttg gcgccggcct cgcgcaacct ggcttcggct gcgcccagcg tggggctgtc
     2461 gcgcagcgcg cgcgcgacca ggtcgtcg
//
LOCUS       DASSVL010000095         2665 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_976809, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000095 DASSVL010000000
VERSION     DASSVL010000095.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2665)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2665)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2665
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_976809"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..889)
                     /locus_tag="VFM52_01615"
     CDS             complement(<1..889)
                     /locus_tag="VFM52_01615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017911501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin carboxylase N-terminal domain-containing
                     protein"
                     /protein_id="HET8763894.1"
                     /translation="MLKKVLIANRGEIALRVLRACQSLGVKTVAVHSTADRNLKHVGL
                     ADEAICIGPAPSAESYLNIPRIIAAAEISDAQAIHPGYGFLSERPDFAEQVEKSGFIF
                     IGPTADVIRTMGDKVEAIKTMKAAGVPCVPGSGAPLGEDMDENLRIAREIGYPVLIKA
                     AGGGGGRGMRDVRTEAHLANAIVMTKQEAKAAFGNDTVYMEKFLENPRHVEVQVMADG
                     QGHAVYLAERDCSMQRRHQKVVEEAPAPGITPEQRAEIGQVCVDACLRIGYRGAGTFE
                     FLFENGRFYFIEMNTRIQVE"
     gene            complement(900..1364)
                     /gene="accB"
                     /locus_tag="VFM52_01620"
     CDS             complement(900..1364)
                     /gene="accB"
                     /locus_tag="VFM52_01620"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007514143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxyl carrier
                     protein"
                     /protein_id="HET8763895.1"
                     /translation="MDLRKIKKLIDLLEESNLAELEIKEGEEVVRLSRVPKSTVAVAA
                     PVATPPVVAAPVAAAAPAAAAQVAAPAAEALPDGHVVKSPMVGTFYAAATPGAAPLVK
                     IGQQVKVGDALGVIEAMKMFNQIEADVAGTVMAVLIENSQPVEFDQPMFVIA"
     gene            complement(1425..1868)
                     /gene="aroQ"
                     /locus_tag="VFM52_01625"
     CDS             complement(1425..1868)
                     /gene="aroQ"
                     /locus_tag="VFM52_01625"
                     /EC_number="4.2.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013534098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003855 - 3-dehydroquinate dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II 3-dehydroquinate dehydratase"
                     /protein_id="HET8763896.1"
                     /translation="MAKLLVLHGPNLNLLGSREPAIYGHATLAAINERLTAQARAAGH
                     ELSWFQSNAEHELVGRVHQARDEQMAMILVNAGAFTHTSIALRDALAGVAIPFIEVHL
                     SNVYAREAFRHHSYLSDLAVGVICGFGADSYRLALDAALQRLPGR"
     gene            complement(2008..2547)
                     /locus_tag="VFM52_01630"
     CDS             complement(2008..2547)
                     /locus_tag="VFM52_01630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015446612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA disulfide reductase family protein"
                     /protein_id="HET8763897.1"
                     /translation="MSRENRVILAVAVLAAAVGGWLQHQSRLAHTDGGVATTRVDAPA
                     PALALPDLAGRVHTLADFRGRRVLLNFWATWCGPCLKEMPALDAAQRKFGDQGAIVVG
                     IAMDDPVRVKAFLAAHAVSYPILLGSLDDPNTTRQWGDRDEVLPYSVLIDADQRIIAT
                     RRGPLDAAQLADWLRPPPQ"
BASE COUNT          388 a          888 c          954 g          435 t
ORIGIN      
        1 gctcgacctg gatgcgggtg ttcatctcga tgaagtagaa gcgcccgttc tcgaacagga
       61 actcgaacgt gccggcgccg cggtagccga tgcgcaggca ggcgtcgacg cagacctggc
      121 cgatctcggc gcgctgttcc ggcgtgatgc ccggcgcggg ggcttcctcg accaccttct
      181 ggtggcggcg ctgcatcgag cagtcgcgct cggcgaggta gaccgcgtgg ccctggccgt
      241 cggccatcac ctgcacttcc acgtggcgcg ggttttccag gaatttctcc atgtagaccg
      301 tgtcgttgcc gaacgcggcc ttggcttcct gcttggtcat cacgatggcg ttggcgaggt
      361 gcgcctcggt gcgcacgtcg cgcatgccgc ggccgccgcc gccgccggcc gccttgatca
      421 gcaccgggta gccgatctcg cgcgcgatgc gcaggttttc gtccatgtcc tcgccgagcg
      481 gtgcgccgga accgggcaca cacggcacgc cggcggcctt catggtcttg atcgcctcga
      541 ccttgtcacc catcgtgcga atcacgtccg cggtcgggcc gatgaagatg aagccggact
      601 tttccacctg ctcggcgaaa tccgggcgct cggagaggaa accgtagccg ggatggatcg
      661 cctgcgcgtc ggagatctcc gcggccgcga tgatgcgcgg gatgttgaga tagctctcgg
      721 ccgacggtgc cggcccgatg cagatcgcct cgtctgcaag gccgacgtgc ttcaggttgc
      781 gatcggcagt ggagtgcacc gccaccgttt tgacgccgag gctctggcag gcgcgcagca
      841 cccgcaacgc gatttcgccg cgattggcga tgaggacctt cttgagcatc cgggtggcct
      901 caggcgatga cgaacatcgg ctggtcgaac tcgaccggct ggctgttctc gatgaggacc
      961 gccatgaccg tgccggcgac gtcggcctcg atctggttga acattttcat ggcctcgatc
     1021 acgccgaggg cgtcgccgac cttgacctgc tggccgatct tgaccagcgg cgccgcgccg
     1081 ggcgtggcgg ccgcgtagaa ggtgccgacc atcggcgact tgacgacgtg gccgtcgggc
     1141 agggcttcgg cggcgggggc ggcgacttgg gcggctgccg cgggagcggc ggcggcaacg
     1201 ggcgcggcaa cgaccggggg cgtcgcgaca ggggcggcga ccgccacggt gctcttcggc
     1261 acgcgcgaca ggcgcacgac ctcctcgccc tccttgatct cgagttcggc gaggttcgac
     1321 tcctcgagca ggtcaatcag cttcttgatc ttgcgcagat ccatggtcag gccttcaggg
     1381 tgttggcgtc gcccccgggg cgacggaaaa ggaaacgggt gcgatcagcg cccaggcagg
     1441 cgctgcagcg cggcatccag cgcgagccga tagctgtcgg cgccgaaacc gcagatcacg
     1501 ccgaccgcga ggtcggacag gtacgagtgg tggcggaacg cctcccgcgc gtacacgttg
     1561 gacaggtgaa cctcgatgaa cgggatggca accccggcca gcgcgtcgcg cagcgcgatg
     1621 ctggtgtggg tgaaggcgcc ggcgttcacc aggatcatgg ccatctgctc gtcacgcgcc
     1681 tggtggacgc ggcccaccag ttcgtgctcg gcgttggact ggaaccagct cagctcgtgc
     1741 cccgccgccc gtgcctgcgc cgtcaaccgc tcgttgatgg cggccagcgt ggcgtggccg
     1801 tagatggccg gctcgcggct gcccagcagg ttgaggttgg gcccgtgcag gaccagaagc
     1861 tttgccacgc ggcgtcttcg ttggcggccg gacgacccga gccgtcgcgc agtgtgcgcg
     1921 gtcgaaccga tgttgtccag ttcgccgcag atcgacgatg ttcagcgtag tacgcgggga
     1981 gtcgccgtgc gaccgcgtat gcaacgccta ttgcggcggt ggccgcagcc agtcggcgag
     2041 ctgcgcggcg tcgagcggac cgcggcgggt cgcgatgatg cgttgatcgg catcgatcag
     2101 cacgctgtac ggcagcacct cgtcgcgatc tccccattgc cgggtggtgt tcggatcgtc
     2161 cagcgagccc agcaagatcg ggtaactcac cgcatgcgcg gcgagaaacg ccttgacccg
     2221 caccggatcg tccatggcaa tacccaccac gatcgcgccc tgatcgccga atttgcgctg
     2281 ggcggcgtcc agcgccggca tctccttcag gcacgggccg caccaggtgg cccagaagtt
     2341 gagcagcacg cggcggccgc ggaaatccgc cagcgtgtgc acgcggccgg cgaggtcggg
     2401 caaggcgagt gccggggcgg gggcatcgac gcgggtggtt gccacgccgc cgtccgtgtg
     2461 cgccagccgg ctttggtgct gcagccaacc gccgacggcg gccgccagca cggcgaccgc
     2521 gaggatgacc cgattttcgc ggctcatcgt tgcccgcccc gccgcgtgtt catccgcgcg
     2581 cggcctgttc cagggcgcgg gtcaccaggg ccgtggtcag caccgtcggc agctggcggc
     2641 cggcgccgcc atcggcgggg aacac
//
LOCUS       DASSVL010000096         3156 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_609532, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000096 DASSVL010000000
VERSION     DASSVL010000096.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3156)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3156)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3156
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_609532"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..211)
                     /locus_tag="VFM52_01635"
     CDS             complement(<1..211)
                     /locus_tag="VFM52_01635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008435166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8763898.1"
                     /translation="MHFAILRPLRRTAIALTLAGLLAGCAAGPDYVRPAAPTAAGYTA
                     TPLPAHTASAAGTAQAFAPLAAPAAE"
     gene            complement(236..715)
                     /locus_tag="VFM52_01640"
     CDS             complement(236..715)
                     /locus_tag="VFM52_01640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8763899.1"
                     /translation="MHRHLLAAVLATLVAVPALPAAAAPQHAHEASTATHQLQLNAGR
                     KWQTDAPLRANMASLRTTLQPLLPALHADTLKPDDYRQLAATVEARVTDIVRQCRLPA
                     EADAQLHIIVGELFAGAGQMKGTDAAHAPRDGAIKVVAALNDYGRYFDDPGFKPLGH"
     gene            complement(744..1451)
                     /locus_tag="VFM52_01645"
     CDS             complement(744..1451)
                     /locus_tag="VFM52_01645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019677824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HET8763900.1"
                     /translation="MGKGIRIEGLRKRYGEGDTAVDALKGVDMTVAPGEVVGLIGPSG
                     SGKSTLLKCLGAVIDPTAGRMVLGDEVIFDQGWKVRDLRALRRDKIGFVFQAPYLIPF
                     LDVTDNVALLPMLAGVPNAEARARALELLTALDVQQRAGAMPTQLSGGEQQRVAIARG
                     LVNRPPVILADEPTAPLDLERAMAVVRVLNDMARQLQTAVIVVTHDEKIIPTFKRIYH
                     IRDGITVEEPGEGRAFD"
     gene            complement(1453..2646)
                     /locus_tag="VFM52_01650"
     CDS             complement(1453..2646)
                     /locus_tag="VFM52_01650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011734096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HET8763901.1"
                     /translation="MISLAGRDILHAWGKFVFTGIGLGLLIGVTLTMAGVYRGMVADA
                     QATLDNSGADLWVVQRGTLGPYAESSSVYDDLWRGIRAMPGVAQAANVTYLTMQVRAG
                     NRDVRAMVAGIATAEPGAPGWPPYLVAGRQITRSHYEAVADIATGFRLGDVLTIRRNQ
                     YTVVGLTRRMVSSNGDPMVFIPLRDAQQAQFLKDNDAIRMQRRRSAENPAFAAPGVLA
                     AVDASQAGNPFVNAILVRIQPGYTPQDVAAPIARWKRLTAYDRVQMGDILVGKLIESS
                     AKQIGLFLVILAVVSAAIVAFIIYTLTMDKIREIAVLKLIGTRDRTIAAMILQQALVL
                     GVIGFAVGKISASFAAPFFPKYVLLIPVDAVAGFAAILAICALASVMAIRMALRVDPA
                     EAIGG"
     gene            complement(2643..>3156)
                     /locus_tag="VFM52_01655"
     CDS             complement(2643..>3156)
                     /locus_tag="VFM52_01655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003056109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="HlyD family efflux transporter periplasmic
                     adaptor subunit"
                     /protein_id="HET8763902.1"
                     /translation="AVDVIDPKQLWVDARFDQLAAGGLAAGLPVTVVLRSRHGQTLHG
                     RVLRVDPLADAVTEETTAKVVFDAVPAPLPPLGELAEVTVSLPATAAAPTVPNAAIRM
                     LGDRRGVWKMSHGKPRFTHVVLGASDLDGMVQVTHGLAAGDRVIAYSAAAITPRRRVK
                     VVTSIPGVSS"
BASE COUNT          458 a         1072 c         1153 g          473 t
ORIGIN      
        1 actccgccgc cggcgccgcc agcggggcga acgcctgggc ggtgcccgcc gctgacgcgg
       61 tatgcgccgg cagcggcgtc gcggtgtagc cagcggcggt cggcgcggcc gggcgcacgt
      121 aatccggccc ggccgcacag cccgcgagca ggccggcgag ggtcagcgcg atggcggtgc
      181 ggcgcagcgg acgcaggatg gcgaagtgca tggcgtgtga cccgtcaggg agtgctcagt
      241 ggcccagcgg cttgaagccg gggtcgtcga agtagcgccc gtagtcgttg agtgcggcga
      301 cgaccttgat ggcgccgtcg cgcggcgcgt gtgccgcgtc ggtgcccttc atctggccgg
      361 cgccggcgaa aagctcgccg acgatgatgt gcagctgcgc gtcggcctcc gcgggcagtc
      421 ggcactggcg cacgatgtcg gtgacgcgcg cctcgacggt ggcggccagc tggcgatagt
      481 catccggctt gagggtgtcg gcgtgcagcg ccggcagcag cggctgcagg gttgtgcgca
      541 gactggccat gttggcgcgc agtggcgcat cggtctgcca tttccggcct gcgttgagct
      601 gcagttggtg ggtggcagtc gaggcttcgt gcgcgtgttg cggcgcggcg gcagcgggaa
      661 gcgccggaac ggcgacgagc gtggcgagta cggcggcgag caggtggcga tgcatgatgg
      721 caggtcctcg tggtgggatg gcgtcagtcg aaggcgcgac cttcgccggg ttcctcgacg
      781 gtgatgccgt cgcggatgtg atagatgcgc ttgaaggtgg ggatgatctt ctcgtcgtgg
      841 gtgaccacga tgacggcggt ctgcagttgc cgcgccatgt cgttcagcac gcgcaccacg
      901 gccatcgcgc gttcgaggtc gagcggcgcg gtaggctcgt cggccaggat caccgggggc
      961 cggttgacca gcccgcgcgc gatcgcgacg cgctgctgct cgccgccgga aagctgcgtc
     1021 ggcatcgccc cggcgcgctg ctgcacgtcg agcgcggtca gcagctccag cgcgcgggcg
     1081 cgggcctcgg cgttcggcac gccggccagc atcggcagca gtgccacgtt gtcggtgaca
     1141 tcgagaaacg ggatcaggta tggcgcctgg aacacgaagc cgatcttgtc gcggcgcagg
     1201 gcgcgcaggt cgcgcacctt ccagccctgg tcgaagatca cctcgtcgcc cagcaccatg
     1261 cgccccgcag tcgggtcgat caccgcgcca aggcatttca gcagcgtgct cttgcccgag
     1321 cccgacggcc cgatgaggcc caccacctcg cccggcgcca ccgtcatgtc gacgcccttg
     1381 agtgcgtcca ccgcggtgtc gccttcaccg tagcgcttgc gcaagccttc gatgcggatg
     1441 cccttgccca tctcagcccc cgatcgcttc ggcggggtcg acgcgcagcg ccatgcggat
     1501 cgccatcacg ctggcgagcg cgcagatggc caggatcgcg gcaaagccgg cgaccgcatc
     1561 gaccggaatc agcagcacgt acttgggaaa gaacggcgcg gcgaagctgg cgctgatctt
     1621 gcccaccgca aagccgatca cgcccagcac cagcgcctgc tgcaggatca tcgcggcgat
     1681 cgtgcggtcg cgcgtgccga tcagcttgag caccgcgatc tcgcggatct tgtccatcgt
     1741 cagcgtgtag atgatgaagg cgacgatcgc cgcgctgacc accgcgagga tgaccaggaa
     1801 caggccgatc tgtttcgccg aggattcgat cagcttgccg acgaggatgt cgcccatctg
     1861 cacgcggtcg tacgccgtga gccgcttcca gcgcgcgatt ggcgcggcga cgtcctgcgg
     1921 cgtgtagccg ggctggatgc gcaccaggat cgcgttgacg aacgggttgc cggcctggct
     1981 cgcatccacc gccgccagca cgccgggcgc cgcaaatgcc gggttttcgg cgctgcgccg
     2041 gcgctgcatc cggatcgcgt cgttgtcctt caggaactgc gcctgctgcg cgtccctgag
     2101 cggaatgaac accatcgggt cgccgttcga ggacaccatg cgccgggtca ggccaaccac
     2161 ggtgtactgg ttgcggcgga tggtgagcac gtcgccgagc cggaagccgg tcgcgatgtc
     2221 ggccaccgct tcgtagtggc tgcgcgtgat ctggcggccg gctacgagat acggcggcca
     2281 gccgggcgcg cccggttcgg cggtggcgat gccggcgacc atcgcacgca catcgcgatt
     2341 gccggcgcgc acctgcatcg tcaggtaggt gacgttggcc gcctgcgcga cgccaggcat
     2401 cgcgcggatg ccgcgccaca ggtcgtcata cacgctggag gattccgcat acggcccgag
     2461 cgtgccccgc tgcaccaccc acaggtcggc gccgctgttg tcgagcgtcg cctgcgcgtc
     2521 ggcgaccatg ccgcggtaca cgccggccat cgtcagcgtc acgccgatca gcagacccag
     2581 gccgatgccg gtgaacacga acttgcccca ggcgtgcagg atgtcgcggc cggcaaggct
     2641 gatcatgacg acaccccggg gatgctggtc accaccttga cccgcctgcg cggcgtgatg
     2701 gcggcggcgc tgtaggcgat cacgcggtca ccggcggcga gtccgtgcgt gacctgcacc
     2761 atgccgtcga ggtcggaggc gcccagcacg acatgggtga agcgcggctt gccgtggctc
     2821 attttccaca cgccgcggcg gtcgcccaac atgcggatcg cggcgttggg cacggtcggt
     2881 gcggccgccg tggccggcag cgaaaccgtg acttcggcca gctcgccgag cggcggcagc
     2941 ggcgcgggca cggcgtcgaa caccaccttc gccgtcgtct cctcggtcac cgcatcggcc
     3001 agcggatcga cgcgcaacac gcggccgtgc aaggtctggc catggcgcga gcgcagcacc
     3061 acggtcaccg gcaggccggc ggcgagcccg ccggcggcga gctggtcgaa gcgcgcgtcg
     3121 acccacaact gcttcgggtc gatcacgtcc accgcg
//
LOCUS       DASSVL010000097         2807 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_227852, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000097 DASSVL010000000
VERSION     DASSVL010000097.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2807)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2807)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2807
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_227852"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(149..1171)
                     /gene="mtnA"
                     /locus_tag="VFM52_01660"
     CDS             complement(149..1171)
                     /gene="mtnA"
                     /locus_tag="VFM52_01660"
                     /EC_number="5.3.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017462232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046523 -
                     S-methyl-5-thioribose-1-phosphate isomerase activity
                     [Evidence IEA];
                     GO_process: GO:0019509 - L-methionine salvage from
                     methylthioadenosine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S-methyl-5-thioribose-1-phosphate isomerase"
                     /protein_id="HET8763903.1"
                     /translation="MDYDRYDRVRAVQWRGDHLHLLDQRRLPQEEHWTDCRQVADVVQ
                     AIRDLVVRGAPAIGIAAAWGVVLAAQRGEAMATALADLRAARPTAVNLMWALDRMRAC
                     LAGGADAATLAREAQAIQDEDLAANRHMGDLGAALIAPGSGVLTHCNTGSLATAGFGT
                     ALGVIRAGVAQGRIAQVYAGETRPWQQGARLTMYELVRDGIDATLIADSAAAHLMKTG
                     AVQWVIVGADRIAANGDTANKIGTYQLAIAAKHHGVKLMVVAPSTTVDMATPDGGAID
                     IELRDPAELLAHAGQRTVVAGAKAWNPVFDVTPHELIDVLVTERGVITQPDAAALRAL
                     FGPGAR"
     gene            complement(1190..1375)
                     /locus_tag="VFM52_01665"
     CDS             complement(1190..1375)
                     /locus_tag="VFM52_01665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008211780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0080135 - regulation of cellular response
                     to stress [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PspC domain-containing protein"
                     /protein_id="HET8763904.1"
                     /translation="MSKRLTRSTHDRMLAGVCGGIADFLGWDPTLVRILWIVLPMLGG
                     SGILIYLILWLVMPLEP"
     gene            complement(1394..2461)
                     /locus_tag="VFM52_01670"
     CDS             complement(1394..2461)
                     /locus_tag="VFM52_01670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007513240.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class III poly(R)-hydroxyalkanoic acid synthase
                     subunit PhaC"
                     /protein_id="HET8763905.1"
                     /translation="MDTPLQLDPARLMQEIGNFQRKLSAGMGQLRHMREPSYANTPRE
                     LVYAEDKLKLYHMLGDRAPTAKTPTLIVYALVNTVWMTDLQPDRSMVRNLLAQGEDVY
                     LIDWGYPGGADRWLTLDDYLNGYLDRCVEAVRRRSGLDAINLLGICQGGAFSLCYSAM
                     HPGKVKNLVTMVTPVDFQTPDNMLSHWCRNLDVDQFVDAMGNIPAMLMNWVYLTLKPV
                     RLNQQKYVGLVDILDKPVELENFLRMERWIFDSPDQAGETFRQFIKDFYQANKLVKGG
                     LMIGDSEVDLRRLTLPILNIYAEQDHLVPPDASRALGRRVNSTDYTELAFKGGHIGIY
                     VSGRAQREVPPAIHQWLHARD"
     gene            complement(2474..>2807)
                     /locus_tag="VFM52_01675"
     CDS             complement(2474..>2807)
                     /locus_tag="VFM52_01675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008435591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="poly(R)-hydroxyalkanoic acid synthase subunit
                     PhaE"
                     /protein_id="HET8763906.1"
                     /translation="GEMVNTQMRVRQLQQKQTAVWCRDLGLPTREEVSSLGERLQQVR
                     RELRRQVGGETSAEVLALRREVSALRHELAQLGVKPAKAPAAAQPKTAVRRTVTPARR
                     TTTTARKR"
BASE COUNT          455 a          959 c          930 g          463 t
ORIGIN      
        1 gccgcgcaca ggaaggagaa caggcgcccg acgtatgggt cggcgttgaa cttgctgacc
       61 agcaactgca cgacgccggc atccaccagg aacccgatga acccgcccac gccgaaccac
      121 gcgagctgct tgggcaggtg ccacatgctc agcgcgcgcc cggaccgaac agggcgcgca
      181 gcgccgcggc atcgggttgc gtgatcacgc cgcgctcggt caccagcacg tcgatgagtt
      241 cgtgcggcgt cacgtcgaat accgggttcc acgccttcgc gccggcgacc accgtgcgct
      301 ggccggcatg agccaacaat tccgcgggat cgcgcagctc gatgtcgatg gcgccaccat
      361 ccggcgtcgc catgtcgacc gtggtcgacg gcgccaccac catgagcttc acgccgtggt
      421 gcttcgccgc gatcgcaagt tggtacgtgc cgatcttgtt ggcggtatcg ccgttcgcgg
      481 cgatgcgatc cgcacccacg atcacccatt gcacggcgcc ggttttcatc aggtgcgccg
      541 cggccgaatc ggcaatcagc gtcgcatcga tgccgtcacg caccagctcg tacatggtga
      601 gccgcgcgcc ctgctgccac ggccgcgtct cgccggcata cacctgcgca atgcgcccct
      661 gcgcgacgcc ggcgcggatg acgccgagcg cggtgccgaa ccccgccgtg gcgagcgagc
      721 cggtattgca atgggtgagc acgccggaac ccggcgcgat caacgcggca ccgaggtcgc
      781 ccatgtggcg gttggcggcc aggtcctcgt cctggatggc ttgtgcctcg cgcgccagcg
      841 ttgcggcatc ggcaccgccg gccaggcatg cacgcatgcg atccaacgcc cacatcaggt
      901 tgacggcagt aggccgcgcc gcgcgcaagt cggccagagc ggtcgccatc gcctcgccgc
      961 gttgcgcggc cagcaccacg ccccacgcag cggcaatgcc gatcgccggc gcgccgcgca
     1021 ccacgaggtc gcgaatggcc tgcaccacgt cggcaacctg ccggcaatcg gtccagtgct
     1081 cctcctgcgg caggcggcgc tggtcgagca aatgcagatg gtcaccgcgc cattgcacgg
     1141 cgcggacgcg gtcgtaacgg tcgtaatcca tggaaagccc ggtcgaaagt cagggttcca
     1201 gcggcatcac cagccacagg atgaggtaga tcaggatgcc ggagccgccg agcatgggca
     1261 gcacgatcca caggatgcgc accagcgtcg gatcccagcc gaggaaatcg gcgataccgc
     1321 cgcacacgcc ggccagcatg cggtcatggg tggaacgcgt caggcgcttg gacatggtat
     1381 cgatccggtt tcgtcaatca cgcgcatgca gccactggtg gatggccggc ggtacctcgc
     1441 gctgcgcgcg gccggacaca tagatgccga tgtgcccgcc cttgaacgcc agctcggtgt
     1501 agtcggtgct gttcacccgc cggcccagcg cgcgcgaggc atccggcggc acgagatgat
     1561 cctgctcggc atagatgttc aggatcggca acgtcagccg gcgcaggtcg acctcgctgt
     1621 cgccgatcat caggccgccc ttcaccagct tgttggcctg gtagaagtcc ttgatgaact
     1681 ggcggaacgt ctcgcccgcc tgatccgggg aatcaaagat ccagcgctcc atgcgcagga
     1741 agttctccag ctccaccggc ttgtcgagga tgtcgaccag gccgacgtat ttctgctggt
     1801 tcaggcgcac cggtttcagc gtcaggtaca cccagttcat cagcatcgcc gggatgttgc
     1861 ccatcgcgtc gacgaactgg tcgacgtcga ggttgcggca ccagtgcgag agcatgttgt
     1921 ccggcgtctg gaaatccacc ggcgtgacca tggtgacgag gttcttcacc ttgcccgggt
     1981 gcatcgcgct gtagcacagc gagaacgcgc cgccctggca gatgccgagc aggttgatcg
     2041 cgtccagacc gctgcgccgg cgcacggcct cgacgcagcg gtcgaggtag ccgttcaggt
     2101 aatcgtccag cgtcagccaa cgatccgcgc caccgggata gccccagtcg atcaggtaga
     2161 cgtcctcgcc ctgcgccagg aggttgcgaa ccatcgaacg atctggctgc agatcggtca
     2221 tccacaccgt gttgaccagc gcgtagacga tcagtgtcgg cgtcttcgcg gtcggcgcgc
     2281 gatcgccgag catgtggtag agcttgagct tgtcctcggc gtagaccagt tcgcgcggcg
     2341 tattcgcgta gctcggttcg cgcatgtggc gcagctggcc catgccggcg ctgagcttgc
     2401 gctggaagtt gccgatctcc tgcatcaagc gggcggggtc gagttgcagc ggggtatcca
     2461 tgggcgtccc ctgtcagcgc ttgcgtgcgg tggtggtggt acggcgcgcc ggcgttacag
     2521 tgcgtcgcac ggcggttttc ggctgggcgg cagctggcgc cttggccggc ttcaccccga
     2581 gctgggccag ttcgtggcgc agtgcgctca cctcgcggcg cagcgcgagt acttcggccg
     2641 acgtctcgcc ccccacctgc ctgcgcagtt cgcggcgtac ctgctgcagg cgctcgccca
     2701 gggacgacac ttcctcgcgc gtcggcaagc caaggtcgcg gcaccacacc gcggtctgtt
     2761 tctgctgcaa ctggcgcacg cgcatctggg tgttgaccat ctcgccg
//
LOCUS       DASSVL010000098         2569 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1287526,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000098 DASSVL010000000
VERSION     DASSVL010000098.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2569)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2569)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2569
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1287526"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1480)
                     /locus_tag="VFM52_01680"
     CDS             complement(<1..1480)
                     /locus_tag="VFM52_01680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015447961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IC family P-type ATPase"
                     /protein_id="HET8763907.1"
                     /translation="MNAAAAWTHPQLLAQVLRPRRDGRSEVALRVEAITQPRAALALE
                     QALRALPGVRQVAIQPAARRVRVVWDADRLGLDQLIAQCAAVHCAAEPLPHDAGDAQR
                     AAELHIALKRLLVAGMCMMQVMSYALVIYLGVVDAVDVTTRGLFRWLGFLTTIPLVAY
                     SAWPFYAGALRELRARRLGIHLPVALAVLLVFAASAVNTVRGAGEIYFDSISMFVFLL
                     LVGRYVELRARQQGDAQGDAAIDATPLLAQRYRADGSLETVPALALRPGDRVHLAEGA
                     TVPADGTLDAAAARFDEALLTGESRPVLRHQGEPLMAGSVLLDGPAALRVEQVGAATA
                     SARLGALATRARAARRAITASDRAIGRFVARVLVLTTLTAGGWLVVDPARAFDAAVAV
                     LVVACPCAFALTAPAAWTRALAVLARRGVLVTNLTALDRLASVDAALFDKTGTLGVPQ
                     LDLAAIQTFGATSRDEALRLATALARESSHPLAQAVARAADTL"
     gene            complement(1477..1620)
                     /locus_tag="VFM52_01685"
     CDS             complement(1477..1620)
                     /locus_tag="VFM52_01685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8763908.1"
                     /translation="MVFLLSVAGCVWIIVASVKYDDAPVAHHAHAVLGVPVAASSSRP
                     PRP"
     gene            complement(1664..>2569)
                     /gene="ccoP"
                     /locus_tag="VFM52_01690"
     CDS             complement(1664..>2569)
                     /gene="ccoP"
                     /locus_tag="VFM52_01690"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008438179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c oxidase, cbb3-type subunit III"
                     /protein_id="HET8763909.1"
                     /translation="GWSLWVMFLVVLNLGITFALFLWAPRAKIPTRPDGTTGHVWAHG
                     TILEGLKNLPTWWIVFSGSMFAAAFIYLFLFPGFGNHKGALGWTSHGQLAREVAANEA
                     RLDPLLDRFRLYTVEQLAGDPQAQQMGKVLFEDNCAACHQYDGKGNMVLGAPNLTDSD
                     WLYGGTGKDITTSIHDGRNGVMPPWASLGEATVNNLAQYVLSLSGRSHDAKMAAAAEP
                     IFKSTCAACHGPDGKGNPAVGAPNLTDQIWLHGGTLADITKTIHDGRQGHMPNWDKRL
                     TSDQIHVLAAYVYHLSHHADAAATD"
BASE COUNT          371 a          881 c          970 g          347 t
ORIGIN      
        1 gcaaggtgtc ggcggcgcgc gcgacggctt gcgccagcgg gtgcgaactt tcccgcgcca
       61 gcgccgtggc caggcgcagc gcttcgtcgc ggctcgtggc gccgaaggtt tggatggcgg
      121 caaggtcgag ctgcggcacg ccgagcgtgc cggtcttgtc gaacagcgcc gcatcgacgc
      181 tcgccaggcg gtccagcgcg gtgaggttgg tgaccagcac gccgcgccgc gcgagcacgg
      241 ccagcgcgcg cgtccacgcc gccggggcgg tgagcgcgaa ggcgcacggg caggcgacga
      301 ccagcaccgc gaccgcggcg tcgaaggcgc gcgccgggtc gaccaccagc cacccgccgg
      361 cggtgagcgt ggtgagcacc agcacgcggg cgacgaagcg gccgatggcg cggtcgctgg
      421 ccgtgatcgc ccgtcgtgcc gcgcgcgccc gcgtggcgag ggcgccgagg cgcgcggagg
      481 cggtggcggc gccaacctgc tcgacgcgca atgcggccgg gccgtcgagc agcacgctgc
      541 cggccatcag gggttccccc tgatggcgca ggaccggacg cgattcgccg gtcaacagcg
      601 cctcgtcgaa gcgggcggcg gcggcatcca gcgtgccgtc ggccggcacc gtcgcccctt
      661 cggccaggtg cacgcggtca ccgggccgga gggccagcgc gggcacggtt tccaggctgc
      721 cgtcggcgcg gtagcgctgg gcgagcagcg gcgtggcgtc gatcgcggca tcgccctgcg
      781 catcgccctg ctggcgcgcg cgcagttcga cgtagcgccc gaccagcagc aggaacacga
      841 acatgctgat cgagtcgaag tagatctcgc cggccccgcg cacggtgttc accgcgctgg
      901 ccgcgaacac cagcagcacg gccagcgcca ccggcaggtg gatgccgagc cggcgtgcgc
      961 gcaattcgcg cagggccccc gcatagaacg gccacgccga gtacgcgacc agcggaatgg
     1021 tggtgaggaa acccagccag cggaacaggc cgcgggtggt gacgtcgacc gcatcgacca
     1081 cgccgaggta gatcaccagt gcgtagctca tcacctgcat catgcacatg ccggcgacca
     1141 gcaggcgttt cagtgcgatg tgcagctcgg cggcgcgctg cgcgtcgccg gcgtcgtgcg
     1201 gcaggggctc ggcggcgcag tgcacggcgg cgcactgcgc gatcagctgg tccaggccga
     1261 ggcgatcggc gtcccacacc acgcgcacgc ggcgcgcggc tggctggatc gccacctggc
     1321 gcacgccggg cagggcgcgc agcgcctgtt cgagcgcgag ggcggcgcgc ggctgggtga
     1381 tcgcctcaac gcgcaacgcg acttcgctgc gcccgtcgcg gcgtggccgc agcacctggg
     1441 cgaggagctg cgggtgcgtc cacgcggcgg ccgcgttcat ggccgcggtg ggcggctgct
     1501 ggacgccgcg acggggacgc cgagcaccgc gtgcgcgtgg tgcgcaaccg gcgcgtcgtc
     1561 atacttgacg ctggcgacga tgatccacac acaaccggcg accgacagca ggaacaccac
     1621 cagcccgaac catgcgatgg gctggtggta ccacgcgctg cgctcagtcg gtggcggcgg
     1681 cgtcggcatg gtgcgacagg tggtagacgt aggcggccag cacgtggatc tggtcgctgg
     1741 tcaggcgctt gtcccagttc ggcatgtggc cctggcgacc gtcgtggatg gtcttggtga
     1801 tgtcggccag ggtgccgccg tgcagccaga tctggtcggt gagattcggt gcgccgaccg
     1861 ccgggttgcc cttgccgtcc gggccgtggc aggccgcgca ggtgctcttg aagatcggtt
     1921 cggccgccgc cgccatcttc gcgtcgtgcg accgtccgga caggctcagc acgtattgcg
     1981 caaggttgtt gacggtggcc tcgccgaggc tcgcccatgg cggcatcacg ccgttgcggc
     2041 cgtcgtggat cgaggtggtg atgtccttgc cggtgccgcc gtagagccag tcgctgtcgg
     2101 tgaggttggg cgcgccaagc accatgttgc ccttgccgtc gtactggtgg caggccgcgc
     2161 agttgtcctc gaacagcacc ttgcccatct gctgcgcctg cgggtcgccg gccagctgct
     2221 ccaccgtgta caggcggaag cggtccagca gcgggtccag cctggcctcg ttggcagcca
     2281 cttcacgcgc cagctggccg tgcgaagtcc agcccagcgc gcccttgtgg ttgccgaagc
     2341 cggggaacag gaacaggtag atgaacgccg cggcgaacat cgagccggag aacacgatcc
     2401 accacgtggg caggttcttg aggccttcca ggatggtgcc gtgcgcccac acgtggcctg
     2461 tggtgccgtc ggggcgggtc gggattttcg cccgcggcgc ccacaggaac agcgcaaagg
     2521 tgatgcccag gttgagcacc accaggaaca tgacccacaa cgaccagcc
//
LOCUS       DASSVL010000099         3209 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_666041, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000099 DASSVL010000000
VERSION     DASSVL010000099.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3209)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3209)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3209
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_666041"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            62..742
                     /locus_tag="VFM52_01695"
     CDS             62..742
                     /locus_tag="VFM52_01695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007805499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HET8763910.1"
                     /translation="MAQQRRIAITGAFGTLGAAVVRAALAAGHAVAAIDRAPVPSGLG
                     AAHGFGGVDLADETAAKGVIDAAAEALGGLDALVNIAGTFRFETLADGSADTWDLLYR
                     VNLRTAISASRAALAHLPDERGRIVNIGAAAALKAGAGMGAYTASKSGVMRFTEALAE
                     ELKPRGITVNALLPSIIDTAPNRADMPKADFSRWVKPEQLAAVILFLLSADASAITGA
                     LIPVVGRV"
     gene            complement(705..1118)
                     /locus_tag="VFM52_01700"
     CDS             complement(705..1118)
                     /locus_tag="VFM52_01700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015446540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8763911.1"
                     /translation="MTRRQVVLAGCWLAILLVGAGATWLRFGLIEQPALADLCTRAAP
                     PWWCALRQMLVLGFLHGVYGGLALAALALALLRRSLVPAALAAALGAFALVLYCPESG
                     AFALLAGCLRLVHLGGRQPAPGALTPGPPPESVHP"
     gene            complement(1115..1891)
                     /locus_tag="VFM52_01705"
     CDS             complement(1115..1891)
                     /locus_tag="VFM52_01705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008213588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease/exonuclease/phosphatase family
                     protein"
                     /protein_id="HET8763912.1"
                     /translation="MSRPQPATRRLRLLSCNILAGASVRSYRDYVTHSLNAVLPGRRK
                     IDNLDRLAALLPQFDVIGLQEADAGSLRSGFLNQTRYLAEAAGMPYWSFQPNRPVAKV
                     SHTANGLISRIEPSAVLDYPLPGRGRGALLVRFGDGEQAFAVVIAHLSLRAQTRARQL
                     GFIGEILTDYPQAVLMGDLNTSADSAEMRQLFARSNLQPPTLDAPTFPSWRPRRALDH
                     ILVSPSVALEKVWTLPQAFSDHLALAAEIRLPAASTERPR"
     gene            complement(1947..2645)
                     /locus_tag="VFM52_01710"
     CDS             complement(1947..2645)
                     /locus_tag="VFM52_01710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008213591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015035 - protein-disulfide reductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiol:disulfide interchange protein DsbA/DsbL"
                     /protein_id="HET8763913.1"
                     /translation="MMRHLAKLRFLALLAGLVLASACTAQSDGSGTAAGNAPAPYTEG
                     EQYVKLPAPYQRYSSDGKVEVAEVFSYGCIHCAEFAPIAEKLKQQLPKGVVFKLVPAP
                     FSAQWLPFARAYYAANQLGVADRTHLQLFVAKFTQHYPLNTLDELADFYAREGVDRAK
                     FMSIATSDAATTKLKADLALIQAWGVDGTPSIVVDGKYRVANVHTLDEMSAVAQWLAK
                     RELAAADKGGTGGK"
     gene            complement(2686..>3209)
                     /locus_tag="VFM52_01715"
     CDS             complement(2686..>3209)
                     /locus_tag="VFM52_01715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015446541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015035 - protein-disulfide reductase
                     activity [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="thiol:disulfide interchange protein DsbA/DsbL"
                     /protein_id="HET8763914.1"
                     /translation="YACPACNAFHTTMDAIAKSLPADAVVDYLPASFRPDENWPVYQR
                     AFYAAEALGVRAKAQDALFDATWKTGETATYDLSTGRPKPKGAWPTIETLAQFYAKYG
                     VDPKEFVAVANSFSVNTKMKQADDLIKAYGVPGTPTIVVDGKYRFSPSDAGSMQAAIE
                     LTQWLVAKEAAGK"
BASE COUNT          472 a         1094 c         1159 g          484 t
ORIGIN      
        1 cgttccgttg cggtggccac gcgcactatg ctcggcgtct caccttgacg aggacgcggg
       61 catggcccag cagcgacgca ttgcgataac cggtgccttc ggcacgctcg gcgccgccgt
      121 ggtgcgcgcg gccctcgccg ccggccacgc ggtggcggcc atcgatcgcg cgccagtgcc
      181 gtccgggctc ggcgcggcgc acggtttcgg cggcgttgat ctcgccgacg agaccgcggc
      241 gaagggcgtg atcgacgccg cggccgaggc gctgggcggg ctcgatgcgc tggtcaacat
      301 cgccggcacg ttccgcttcg agacgctggc cgacggcagc gccgacacct gggacctgct
      361 ctaccgggtc aacctgcgca ccgccatttc ggccagccgt gcggcgctgg cgcacctgcc
      421 cgacgagcgc gggcgcatcg tcaacatcgg cgccgccgcc gcgctcaagg ccggggccgg
      481 catgggcgcg tacaccgcgt ccaagtccgg cgtgatgcgt ttcaccgagg cgctggccga
      541 ggagctgaag ccgcgcggca tcaccgtcaa cgcgctgctg cccagcatca tcgacaccgc
      601 gccgaaccgc gccgacatgc cgaaggcgga tttcagccgc tgggtgaagc cggaacagct
      661 ggcggcggtg atcctgttcc tgctgtccgc cgacgccagc gcgattacgg gtgcactgat
      721 tccggtggtg ggccgggtgt gagtgcaccg ggcgccggtt gccggccgcc gaggtgcacc
      781 aggcgcaggc agccggcgag cagcgcgaac gcgcccgatt cagggcagta gagcaccagg
      841 gcgaacgcgc cgagcgcggc cgccaacgcg gccggcacga gcgaacggcg cagcagcgcc
      901 agcgcgagcg ccgccagcgc caggccgccg tacacgccgt gcaggaaccc gagcaccagc
      961 atctggcgca gtgcgcacca ccacggcggc gctgcgcgcg tgcacaggtc ggccagtgcg
     1021 ggctgttcga tcaggccgaa gcgcaaccac gtggcgccgg cgccgaccag caggattgcc
     1081 agccagcagc cggccagaac cacttggcgg cgcgtcaccg cgggcgttcc gtgctggccg
     1141 ccggcaggcg gatttccgcc gccagcgcga ggtggtcgga aaacgcctgc ggcaacgtcc
     1201 acaccttctc tagtgctacc gagggcgaca ccaggatgtg gtcgagcgcg cgccggggtc
     1261 gccagctggg aaacgtcggc gcgtccagcg tcggcggctg caggttggag cgcgcgaaga
     1321 gctggcgcat ctcggcgctg tcggcactgg tgttgaggtc gcccatcagc accgcctgcg
     1381 ggtaatcggt gaggatttcg ccgatgaacc cgagctggcg cgcccgcgtc tgcgcgcgca
     1441 gcgacaggtg cgcgatgacc accgcgaacg cctgttcgcc gtcgccgaag cgcaccagca
     1501 gcgcgccgcg gccacgcccc ggcaagggat agtcgagcac cgcggaaggt tcgatccggc
     1561 tgatcagccc gttcgcggta tgcgacacct tggccaccgg ccggttcggc tggaagctcc
     1621 agtacggcat gccggcggct tcggcgagat agcgcgtctg gttcaaaaac cccgagcgca
     1681 ggctgccggc gtcggcttcc tgcaggccga tcacgtcgaa ctgcggcagc agcgccgcga
     1741 ggcggtcgag gttgtcgatc ttgcgccggc ccggcagcac cgcgttcagg ctgtgggtga
     1801 cgtagtcgcg gtagctgcgc acgctcgcac cggcgaggat gttgcagctc agcaggcgca
     1861 gacgtcgcgt ggcgggttgg gggcggctca tggcgccgcc atggtgcacg cggctggtcg
     1921 caccgagcgt gaacgccggc atggcgctac ttgccgccgg tgccgccctt gtcggcggcg
     1981 gccagctcgc gcttggccag ccactgcgcc acggcggaca tctcgtccag cgtgtgcacg
     2041 ttggccacgc ggtacttgcc gtcgacgacg atgctcggcg tgccgtccac gccccacgcc
     2101 tggatcagtg cgagatcggc cttgagcttg gtggtggcgg cgtcggaggt ggcgatgctc
     2161 atgaacttcg cgcggtccac gccttcgcgg gcgtagaaat cggccagctc atccagcgtg
     2221 ttgagcgggt agtgctgggt gaacttggcg acgaacagct gcaggtgggt gcggtcggcg
     2281 acgccgagct ggttcgccgc gtagtaggcg cgtgcaaacg gcagccactg cgcgctgaac
     2341 ggcgccggca ccagcttgaa caccacgccc tttggcaact gctgcttgag cttttccgcg
     2401 atcggcgcga actcggcgca gtggatgcag ccgtaggaga acacctcggc cacttccacc
     2461 ttgccgtcgc tgctgtagcg ctggtagggc gccggcagct tcacgtactg ctcgccctcg
     2521 gtgtacggcg cgggcgcgtt gccggcggcc gtgccgctgc cgtccgactg cgcggtgcat
     2581 gcgctggcca gcacgaggcc ggcgaggagg gcgaggaaac gcagcttggc gagatgcctc
     2641 atcacgaata gctccgcacg aatggtcgca ggccgttgcc gcggcttact tgccggcggc
     2701 ttccttcgcc accagccact gggtcagctc gatcgccgcc tgcatgctgc cggcgtcgga
     2761 cggcgagaaa cggtacttgc cgtcgaccac gatggtcggc gtgccgggca caccgtaggc
     2821 cttgatgagg tcgtccgcct gtttcatctt ggtgttgacc gagaacgaat tcgccaccgc
     2881 gacgaactcc ttcggatcga cgccgtactt ggcatagaac tgcgccaggg tctcgatcgt
     2941 cggccatgcg cccttgggct tcggacggcc ggtggagaga tcgtaggtgg cggtttcgcc
     3001 ggtcttccag gtcgcgtcga acagtgcatc ctgggccttc gcacgcacgc caagcgcctc
     3061 ggcggcgtag aacgcgcgct ggtacaccgg ccagttctcg tccgggcgga atgacgcagg
     3121 cagatagtcg accaccgcat ccgccggcag gctcttggcg atcgcgtcca tcgtggtgtg
     3181 gaaggcgttg cacgccgggc aggcgtagg
//
LOCUS       DASSVL010000100         2769 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1033177,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000100 DASSVL010000000
VERSION     DASSVL010000100.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2769)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2769)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2769
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1033177"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1909)
                     /locus_tag="VFM52_01720"
     CDS             complement(<1..1909)
                     /locus_tag="VFM52_01720"
                     /inference="COORDINATES: protein motif:HMM:NF028468.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MASE3 domain-containing protein"
                     /protein_id="HET8763915.1"
                     /translation="MVHPSHQREFRPALRSIGLLGLLLVVFLALPEAWRERRVPDYLA
                     WHMALETLSIAVAALIFGTSWSGRNEHPLRNYSVLGVTFLGVGLLDFAHMLSAEGMPD
                     FLGPGSSDKAIYFWLAARALTACGLLAVAWMQWGKRVSRRVLRGMLAGVLALVVATVA
                     AYAWWWQALPRFFVPGQGLTPFKVGCELVLIAMYLVIAGRLGWCLHAPRTFHASGLLA
                     AACVLAEGGVLFSLYGSTTDLDILLGHAFKAVAYVFLYQAVFAETVRRPYALLRASRQ
                     QLQLTLDALPDLLFELDADGRYLAVHAGRPSALVAARERLLGRTVREVMPASEADTVM
                     AALAEAQRGGVSRGKLIALDTIGGSRRWFELSVAARMPGQAGGFVVISHDVTERRRAD
                     EDRRKLSAAVAQSPVAIIITGLDERIEYVNEAFTRHTGYPAVEAIGCNVRELLQSGEA
                     ASIRAYREAMECLAQGIPWQGELVNRTKSGREIVEAVLLYPLRDAQGRITHYLAHHED
                     ITEKKRAVERIQWLSLYDRLTGLPNATMLREHFQHARAQGEQLAVLWIDLDRFKDVND
                     SLGHGAGDQLLQAVAQRLLAPLTRDQLLARHSGDGFVMVAPQADQAAAAHLAQALLLA
                     LAPPVALAGQEL"
     gene            2088..>2769
                     /locus_tag="VFM52_01725"
     CDS             2088..>2769
                     /locus_tag="VFM52_01725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007513743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UvrD-helicase domain-containing protein"
                     /protein_id="HET8763916.1"
                     /translation="MLNPQQQAAVEHCDTPLLVLAGAGSGKTSVITQKIAHLIQRRRL
                     AAGRIAAITFTNKAAREMRERVGKLVSSDDAAALTVCTFHALGLKFLQIEHARADLRR
                     GFSVFDAGDSEGILKELSPKGAKPDVLAGIRHLVSAAKSAGLSPAEALAAARSPKEIE
                     AATIYELYQARLAAFNAVDFDDLIRLPLRILETDTECRDAWRERLRYLLVDEYQDTND
                     AQYRLLKVL"
BASE COUNT          474 a         1015 c          911 g          369 t
ORIGIN      
        1 acagctcctg cccagccagc gcgaccggtg gggcgagcgc cagcaacaac gcctgggcga
       61 ggtgcgccgc ggcagcctgg tcggcttgcg gcgccaccat cacgaaaccg tcgccggagt
      121 gccgcgccag cagctggtcg cgcgtgagcg gcgccagcag gcgctgcgcg actgcctgca
      181 gcagctggtc gccggcgcca tgccccagcg agtcgttgac gtccttgaag cgatccaggt
      241 cgatccacag caccgccagc tgctcgccct gcgcccgcgc atgctggaag tgctcgcgca
      301 gcatggtggc gttcggcagg ccggtcagcc ggtcgtacag cgaaagccac tggatgcgtt
      361 cgaccgcgcg cttcttctcg gtgatgtcct cgtggtgcgc caggtaatgg gtgatccggc
      421 cctgcgcatc gcgcagcggg tacagcagca ccgcctcgac gatctcgcgc ccggacttgg
      481 tgcggttgac aagctcgccc tgccacggga tgccttgcgc gaggcactcc atcgcctccc
      541 ggtaggcgcg tatcgacgcg gcctcgccgg actgcagcaa ctcgcgcacg ttgcagccga
      601 tcgcctccac cgcggggtag ccggtgtggc gggtaaacgc ctcgttgacg tactcgatgc
      661 gctcgtcgag cccggtgatg atgatcgcga ccgggctttg cgccaccgcg gccgacagct
      721 tgcggcgatc ctcgtcggcc cgccgccgtt cggtgacatc gtgcgaaatc accacgaaac
      781 cgccggcctg gcccggcatg cgcgccgcca ccgacagctc gaaccagcgt cggctgccgc
      841 cgatcgtgtc cagcgcgatg agcttgccgc gcgagacgcc gccgcgttgc gcctcggcca
      901 gcgcggccat gaccgtatcg gcttcggaag ccggcatgac ctcgcgcacg gtcctgccga
      961 gcagtcgttc ccgcgccgcc accagcgcgc tggggcgacc ggcatgcacc gccaggtagc
     1021 gcccgtcggc gtcaagctcg aacagcaggt cgggcaaggc gtccagcgtg agctgcagtt
     1081 gctgccggga tgcgcgcagc agcgcgtagg ggcggcgcac ggtttccgcg aacaccgcct
     1141 ggtacaggaa cacgtaggcc accgccttga aggcgtgccc gagcaggatg tcgaggtcgg
     1201 tcgtcgagcc gtacagcgaa aacagcacgc cgccttcggc cagcacgcac gcagccgcca
     1261 gcaaaccgct ggcgtggaac gtgcgcggcg cgtgcaggca ccaccccagg cgcccggcga
     1321 tgaccagata catcgcgatc aggaccagct cgcagccgac cttgaacggg gtcagcccct
     1381 gtcccggcac gaagaaccgc ggcagcgcct gccaccacca cgcatacgcc gccacggtcg
     1441 ccaccaccag cgccagcacg ccggcgagca tcccgcgcaa gacccgccgc gacacccgct
     1501 tgccccactg catccacgcc accgccagca ggccacatgc cgtcagggcg cgcgccgcca
     1561 gccagaagta gatggccttg tcggacgagc ccgggccgag gaaatccggc atgccttcgg
     1621 ccgaaagcat gtgcgcgaaa tcgagcagcc ccacaccgag gaaggtcacc cccagcaccg
     1681 agtaattgcg cagcgggtgc tcgttgcgcc cgctccagct ggtgccgaaa atcagtgccg
     1741 ccaccgcgat cgacaaggtt tccagcgcca tgtgccaggc aaggtagtcg ggcacgcggc
     1801 gctcgcgcca tgcttcgggc agcgccagga acaccaccag cagcagcccc agcaagccga
     1861 tgctgcgcag ggccgggcga aactcacgct ggtgactggg gtgaaccaag gttgctcctg
     1921 gatggcggta tcgaaggcat gccggacgac accacggacc acgattgcat cggccaccca
     1981 gccagcgact tgatcctacg cgcccggtgt gcaggcgccg tgcaatcgcc cgggccgccg
     2041 ctgacggtct gctaccatcc agccccgctt cgcgccccac gccgttcatg ctcaacccgc
     2101 aacaacaagc cgccgtcgaa cactgcgaca cccccttgct ggtgttggcg ggcgcgggct
     2161 cgggcaagac cagcgtcatt acccagaaga tcgcgcacct gatccagcgc cgccggctcg
     2221 ccgccggccg gatcgcggcg atcaccttca ccaacaaggc cgcgcgcgag atgcgcgagc
     2281 gcgtcggcaa gctggtcagc agcgacgacg cagccgcgct cacggtgtgc acgttccacg
     2341 cgctggggct gaaattcctg cagatcgagc acgcgcgcgc cgacctgcgg cgcggcttct
     2401 cggtgttcga cgccggcgac agcgaaggca tcctcaagga gctctcgccc aagggcgcga
     2461 agcccgacgt gctcgccggc atccgccacc tggtgagcgc ggcgaagagt gcgggactgt
     2521 cgcccgcgga ggcactggct gccgcgcgca gcccgaagga gatcgaggcg gcgaccatct
     2581 acgagctgta ccaggcgcgt ctcgccgcct tcaacgcggt ggatttcgac gacttgatcc
     2641 gcctgccgct gcgcatcctg gaaaccgaca ccgagtgccg cgacgcgtgg cgcgagcgcc
     2701 tgcgctatct gttggtggac gagtaccagg acaccaacga cgcgcaatac cgcctgctga
     2761 aagtgctgg
//
LOCUS       DASSVL010000101         2511 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_849810, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000101 DASSVL010000000
VERSION     DASSVL010000101.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2511)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2511)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2511
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_849810"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1924)
                     /gene="acnA"
                     /locus_tag="VFM52_01730"
     CDS             complement(<1..1924)
                     /gene="acnA"
                     /locus_tag="VFM52_01730"
                     /EC_number="4.2.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007509920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003994 - aconitate hydratase activity
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aconitate hydratase AcnA"
                     /protein_id="HET8763917.1"
                     /translation="MKDSFQVRDTFEANGKKYHFFSLAKLGQRFDIKRLPYSLKILLE
                     SQLRNEDGVDVTPDKIEAIANWVPTATPSTEIAFMPARVILQDFTGVPCVVDLAAMRD
                     AVVKLGGDATQINPVNPVELVIDHSVQVDIFGSEGALEKNVEIEFQRNRERYSFLRWG
                     QKAFKHFRVVPPRTGIVHQVNLEYLARVVFTKEIEGETYAYPDSLFGTDSHTTMINGL
                     GVLGWGVGGIEAEAAMLGQPSSMLIPQVVGVKLTGQLAEGVTATDLVLTVTEKLRKLG
                     VVGKFVEYFGPGLKNLGLADRATVGNMSPEYGATCGIFPIDQVSLDYMHLSGRSDEQV
                     KLVEAYAKAQGLWHDEHTPAAEYSVVVEVNLPDVVPSMAGPKRPQDRVLLAEAKENFH
                     EVVVPMTARRTKAKPAGGVEVTRNGQHFKLDDGAVVIAAITSCTNTSNPTVMVGAGLL
                     AKKAHDLGLNSKPWVKTSLAPGSKVVTDYLVKTDLLKDLEAIGFYVVGYGCTTCIGNS
                     GPLPEEVSAGISEGDLAVAAVLSGNRNFEGRVHAETKLNYLASPPLVVAYALAGTLDI
                     NLTKDPIGTGKNGKPVYLKDIWPSNREIGEAMAGRITADMFKKNYADVFKGDERWNAI
                     PFPNGDVYQWEKSTYIK"
     gene            2132..>2511
                     /locus_tag="VFM52_01735"
     CDS             2132..>2511
                     /locus_tag="VFM52_01735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007809053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HET8763918.1"
                     /translation="MQHSMISTALAAVSLRDLAMVQAVHRHASFNHAARAMHISPSGL
                     SHQVQKVEQALGAPLFERGGRKVVPTASGRRLLARVDAVLAAAEALQQGAHAGELAFG
                     GELRLGVPASLGPYLLPHLIAPFP"
BASE COUNT          366 a          803 c          883 g          459 t
ORIGIN      
        1 ccttgatgta ggtcgacttc tcccattggt acacgtcacc gttcgggaac gggatggcgt
       61 tccagcgctc gtcgcccttg aacacgtcgg cgtagttctt cttgaacatg tcggcggtga
      121 tgcggccggc catcgcctcg ccgatctcgc ggttcgacgg ccagatgtcc ttgaggtaca
      181 ccggcttgcc gttcttgccg gtaccgatcg gatccttggt caggttgatg tcgagcgtgc
      241 cggccagtgc gtaggcgacg accagcggcg gcgaggcgag gtagttgagc ttggtctcgg
      301 cgtgcacgcg gccttcgaag ttgcggttgc cggaaagcac ggcggcgacg gcgaggtcac
      361 cctcgctgat gccggcgctg acttcctccg gcagcgggcc ggagttgccg atgcaggtgg
      421 tgcagccgta gccgaccacg tagaagccga tggcttccag atccttgagc aggtcggtct
      481 tgaccaggta gtcggtgacg accttggagc ccggcgccag cgaggtcttc acccacggct
      541 tggagttgag gccgaggtcg tgcgccttct tggccaagag gccggcgccg accatcaccg
      601 tcgggttgga ggtgttggtg cacgaggtga tcgccgcgat caccaccgcg ccgtcgtcca
      661 gcttgaagtg ctggccgttg cgcgtgacct cgacaccgcc cgcgggcttc gccttggtgc
      721 ggcgcgcggt catcggcacc acgacttcgt ggaagttctc cttggcctcg gccagcagca
      781 cgcggtcctg cgggcgcttc gggccggcca tcgacggcac cacgtcgggc aggttgacct
      841 cgaccaccac cgagtattcg gcggccggcg tgtgctcgtc gtgccacagg ccctgcgcct
      901 tggcgtaggc ctcgaccagc ttgacctgct cgtcgctgcg gccggagagg tgcatgtagt
      961 cgagcgacac ctggtcgatc gggaagatgc cgcaggtggc gccgtattcg ggcgacatgt
     1021 tgccgaccgt ggcgcggtcg gcgaggccga ggttcttgag gccggggccg aagtattcga
     1081 cgaacttgcc gaccacgccg agcttgcgca gcttctcggt caccgtcagc acgaggtcgg
     1141 tggcggtcac gccttcggcg agctggccgg tcagcttcac gccgaccacc tgcgggatca
     1201 gcatcgacga gggctggccg agcatcgcgg cttccgcctc gatgccgccg acgccccagc
     1261 cgagcacgcc caggccgttg atcatggtgg tgtgcgagtc ggtgccgaac agggagtcgg
     1321 ggtaggcgta ggtctcgccc tcgatctcct tggtgaacac cacgcgcgcg aggtattcca
     1381 ggttcacctg gtgcacgatg ccggtgcgcg gcggcaccac gcggaagtgc ttgaacgcct
     1441 tctggcccca gcgcaggaag ctgtagcgct cgcggttgcg ctggaactcg atctcgacgt
     1501 tcttctccag cgcgccttcg gagccgaaga tgtcgacctg caccgagtgg tcgatcacca
     1561 gttccaccgg attcaccggg ttgatctggg tggcgtcgcc gccgagcttg accaccgcgt
     1621 cgcgcatcgc ggccaggtcg accacgcacg gcacgccggt gaagtcctgc aggatcacgc
     1681 gcgccggcat gaacgcgatt tcggtcgacg gcgtggcggt gggcacccag ttcgcgatcg
     1741 cctcgatctt gtctggcgtc acgtcgacgc catcctcgtt gcgcagctgg ctctccagca
     1801 ggatcttgag cgagtagggc aggcgcttaa tgtcgaagcg ctggccgagc ttggcgaggc
     1861 tgaagaagtg gtacttcttg ccgttggcct cgaacgtgtc gcgtacctgg aaggaatctt
     1921 tcatgggggc tcctggcgaa atcctgctgc tgggatggtg gcggttcggc gcggtcgacg
     1981 caggccgatg cacgaagatg gcaattttcg cgcaaagccg gcgtgattgt cgcccggttg
     2041 gcgcgctgca aggcgcagca aacgcggcgc gccggccaaa ggccgtatag catggccagc
     2101 ttcgccacct tgcacaaacg catttcatga catgcagcat tcgatgatat cgaccgcgct
     2161 ggccgcggtg tcgctgcgcg acctggcgat ggtgcaggcg gtgcaccgcc acgccagctt
     2221 caaccacgcg gcgcgcgcga tgcacatcag tccgtccggg ttgtcgcacc aggtacagaa
     2281 ggtggagcag gcgctgggtg cgccgctgtt cgagcgcggc gggcgcaagg tggtgcccac
     2341 cgccagcggg cgtcgcctgc tcgcgcgcgt cgacgccgtg ctcgccgcgg ccgaagcgct
     2401 gcagcagggg gcgcatgccg gcgagctggc gttcggcggc gagctgcggc tgggggtgcc
     2461 ggcttcgctg gggccgtatc tcctgccgca cctgatcgcg ccgttcccgc a
//
LOCUS       DASSVL010000102         4697 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_807285, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000102 DASSVL010000000
VERSION     DASSVL010000102.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 4697)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4697)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4697
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_807285"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1117
                     /locus_tag="VFM52_01740"
     CDS             <1..1117
                     /locus_tag="VFM52_01740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009595054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glutathionylspermidine synthase family protein"
                     /protein_id="HET8763919.1"
                     /translation="AKAASLGFGFHTIDDAPYWDETAYYAFTLREIEEDIEAPTQELH
                     AMALDLVDRVVCDESLLRRLAIPEAYWDWIAQSWRAHDPHLYGRLDFAYDGLGPAKLY
                     ELNYDTPTSLYESAFFQWLWLEDGIASGLLPACADQFNAIQERLIERFAGLAPRLARP
                     FHFGAVHDSAEDQGTIAYLRDCALQAGIQSGTLAIEDIGVTAAGQFTDLDDQVIGCLF
                     KLYPLEDMFREAFGRYLPASGLQLVEPPWKAILSNKGILPLLWDTHPGHPNLLPARFD
                     DGRPLAAGWVRKPLHSREGANVALHLADGREVTTPGPYAGPCILQACHPLTAFASQYP
                     LVGSWVVGDHACGMGLREDRSLVTQDSARFLPHAIIA"
     gene            complement(1139..1462)
                     /locus_tag="VFM52_01745"
     CDS             complement(1139..1462)
                     /locus_tag="VFM52_01745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007509726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2845 domain-containing protein"
                     /protein_id="HET8763920.1"
                     /translation="MRQVRWWWVMGWLLALPAAQAGDSLRVGNRVLVAGDSAATVSSL
                     LGKPTYKSHSRVASTRGSRKRRSARTVSTNAEPGERWQYHRDGRVIVVTLVDGRVTDI
                     DERVR"
     gene            complement(1609..2361)
                     /locus_tag="VFM52_01750"
     CDS             complement(1609..2361)
                     /locus_tag="VFM52_01750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019465806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2884 family protein"
                     /protein_id="HET8763921.1"
                     /translation="MRTPLWSSLLLPLALALPLHAQDLATTCHASSSYDVTIRADSVL
                     FDRPSPAPLRVEMNHGALRVDGANVPLNAEDQDRLSLFERDLRALVPKVKTVADHGVD
                     IAVQGLRDESASLGLDAGARAQMDQKLAAESASLKQRIAASNSTHDWQGSMADQVIDQ
                     VAGDLLPLVGGALTQQAIDAATSGDLQAAGALRDRAADLATQLEPRMRQRMQQLRPQI
                     QALCPAVRRLVALQQGVRDNRGRPLDLLDIDQ"
     gene            complement(2529..3074)
                     /locus_tag="VFM52_01755"
     CDS             complement(2529..3074)
                     /locus_tag="VFM52_01755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008438080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8763922.1"
                     /translation="MPVTARLDTRTAPRRLAAWRVAVWALLLFAGFGCVQYLMHAQLL
                     WAQRAHVSATDAGTLHRLLAWDAGYFVVAFVLIVLCAGCILRQAWARAPLRWACAALA
                     LWMLVSGGLMLARWSQFDQASVDALAQFGADAKLRAAVAHARRVYGITLGLKAVAVPL
                     LVWLAWRLDTPAARAQFRRRH"
     gene            complement(3074..3616)
                     /locus_tag="VFM52_01760"
     CDS             complement(3074..3616)
                     /locus_tag="VFM52_01760"
                     /EC_number="1.11.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007081266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin"
                     /protein_id="HET8763923.1"
                     /translation="MRRLLLLCVLTLLGGLLAAPVLAADAGPQVGDTAPAFRLQDQNG
                     HWRSPADYHGHWLVLYFYPKDFTPGCTTEVCTFRDDLAKLRQAGADVVGVSLDDVKSH
                     AEFAAKYHVPFPLLSDADRQVATTYGVLTSTAGVHYAARTTFLIDPQGKIAKIYAKVD
                     PQANSGQVLADLARQPKAAR"
     gene            complement(3739..4197)
                     /locus_tag="VFM52_01765"
     CDS             complement(3739..4197)
                     /locus_tag="VFM52_01765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008210046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8763924.1"
                     /translation="MSKHTLALTVVLLLGTVALAAAPATPAYAAEANVKCHLEFTLSG
                     WSIVYKHAEGSGTVRCDNGEHAAVKINVIGGGLTAGKFRIDHGTGDITHVRNIEDVFG
                     SYAQAGAELGVVKSGTAQVLTKGTTSLALAGHGEGINLGVSVGRVTIKRR"
     gene            4344..>4697
                     /locus_tag="VFM52_01770"
     CDS             4344..>4697
                     /locus_tag="VFM52_01770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008438082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0032559 - adenyl ribonucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HET8763925.1"
                     /translation="MPKYSLVGYDGSDAARRAFAFAMDLARACHGRVRVVSVLQVAEG
                     GDTCALMMTDAGDRRGQELRDELATIAPDTADLADIELVHGSPGDVLLNEVGQHAIDH
                     IVIGHTERGALARWLL"
BASE COUNT          712 a         1705 c         1595 g          685 t
ORIGIN      
        1 cgcgaaggcc gcgtcgctcg gcttcggctt ccacaccatc gacgacgcgc cgtactggga
       61 cgaaaccgca tactacgcgt tcaccctgcg cgagatcgag gaagacatcg aggcgccgac
      121 gcaggagctg cacgcgatgg cgctcgacct cgtcgaccgc gtggtgtgcg acgagtcgct
      181 gctgcgccgg ctcgcgatcc cggaggcgta ctgggactgg atcgcgcaga gctggcgcgc
      241 gcatgacccg cacctgtacg ggcgcctgga cttcgcctac gacgggctgg gtccggcaaa
      301 actctacgaa ctcaactacg acaccccgac ctcgctgtac gagtcggcgt tcttccagtg
      361 gctatggctg gaggatggca tcgccagcgg cctgctgccg gcctgcgccg accagttcaa
      421 cgcgatccag gagcgcctga tcgagcggtt cgctggactg gccccgcgcc tcgcgcgacc
      481 gttccacttc ggcgccgtgc acgactccgc cgaggaccag ggcaccatcg cctatctgcg
      541 ggattgcgcg ctgcaggcgg gaatccagag cgggacgctg gcgatcgagg acatcggcgt
      601 caccgccgcc ggccagttca ccgatctcga cgaccaggtg atcggctgcc tgttcaagct
      661 gtatccgctc gaggacatgt tccgcgaagc gttcggccgc tacctgccgg cgtccggcct
      721 gcaactggtc gaaccgccat ggaaggcgat cctgagcaac aagggcatcc tgccgctgct
      781 gtgggacacc cacccgggtc atcccaacct gctcccggcg cgcttcgacg acggccgccc
      841 gctggcagca ggctgggtgc gcaagccgct gcattcccgc gaaggcgcaa acgtggcatt
      901 gcacctggcc gacggccgcg aggtgacgac ccccggcccg tacgccggcc cgtgcatcct
      961 gcaggcctgc cacccgctga ccgcgttcgc cagccagtac ccgctggtcg gcagctgggt
     1021 cgtcggtgat cacgcctgcg gcatgggcct gcgcgaggat cgcagcctgg tgacccagga
     1081 cagcgcgcgc ttcctgccgc acgccatcat cgcttgacgg ccaggctgcg agccgggatc
     1141 aacgcacgcg ctcgtcgatg tcggtaaccc ggccgtcgac cagggtcacc acgatcaccc
     1201 ggccgtcgcg gtggtactgc cagcgctcgc ccggctcggc gttcgtggac accgtgcgcg
     1261 cgctgcgccg cttgcggctg ccgcgggtcg acgccacgcg cgagtgcgac ttgtaggtgg
     1321 gcttgccgag caagctgctc accgtcgccg cactgtcgcc agcgaccagc acgcgattgc
     1381 cgacgcgcaa gctgtcgccc gcctgggcag ccggcagcgc cagcagccag cccatcaccc
     1441 accaccaccg tacctgtcgc atcgcgccac ctgtgcattg gccgggccgg ctgcccatga
     1501 agcacggtag gcggcacagc caccgccgcc tatcgctccg cggcgccgcc gccggtcggc
     1561 gccgcgcgca ccgcgatgtc ggcggcgatc gcacgcgcag cgcgtggcct actggtcgat
     1621 gtcgagcagg tcgagcgggc ggccccggtt gtcgcgcacg ccctgctgca aggcgaccag
     1681 ccggcgcacc gccgggcaca acgcctggat ctgcggacgc aattgctgca tgcgctggcg
     1741 catgcgcggt tcgagctggg tggcgagatc cgccgcacga tcgcgcagcg cgccggcggc
     1801 ctgcagatcg ccgctggttg ccgcgtcgat ggcctgctgg gtcagcgcgc cgccgaccaa
     1861 cggcaacagg tcgccggcga cctggtcgat cacctgatcg gccatgctgc cttgccaatc
     1921 gtgggtgctg ttgctggcgg cgatgcgctg cttgaggctg gcggattccg ccgccagctt
     1981 ttgatccatc tgcgcgcggg cgcccgcatc cagcccgagg ctggccgact cgtcgcgcaa
     2041 accttgcacg gcaatgtcga cgccgtggtc ggccaccgtc ttgaccttgg gcaccagtgc
     2101 gcgcaggtcg cgctcgaaca ggctcaggcg gtcctggtcc tcggcgttga gcggcacatt
     2161 cgcgccatcc acacgcagcg cgccatggtt catctcgacc cgcagcggcg ccgggctcgg
     2221 gcggtcgaac agcacgctgt ccgcgcggat cgtcacgtcg tagctgctgc tggcgtgaca
     2281 ggtggtggcg agatcctgcg catgcagcgg cagggccagc gcgagcggca gcagcaacga
     2341 cgaccagagc ggggtgcgca tcgacgggtt ccatgggaaa agcccgctac cgatagcccg
     2401 cggggcgtca acccacgctg aacgcgcctg gccgcaccgg ggcgggaacc cgcccgcggc
     2461 cggcatccac cgcgacgatc cgtcaactgg ggcaacgcgc ctggccgacc ggtgcgaaac
     2521 tccggcgctc agtgccggcg gcggaattgc gcgcgcgccg ccggcgtatc cagccgccac
     2581 gccagccaga ccagcagcgg cacggcaacg gccttcaagc cgagcgtgat gccgtacacg
     2641 cggcgcgcgt gggccaccgc cgcgcgcagt ttcgcatccg ccccgaactg cgcgagcgca
     2701 tcgacgctgg cctgatcgaa ctgcgaccag cgcgccagca tcaggccgcc gctgaccagc
     2761 atccacagcg ccagcgcggc acacgcccag cgcagcggcg cgcgcgccca ggcctggcgc
     2821 aggatgcaac cggcgcacag cacgatcagc acgaacgcga cgacgaaata accggcatcc
     2881 caggcgagca ggcggtgcag cgtgccggca tccgttgccg agacgtgtgc ccgttgcgcc
     2941 cacaagagct gcgcgtgcat caggtattgc acgcatccga agccggcgaa cagcagcagc
     3001 gcccagaccg cgacgcgcca cgcggcaagc ctgcgcggcg ctgtgcgcgt gtccagccgc
     3061 gcggtcaccg gcatcagcgc gccgccttcg gctgccgcgc gagatcggcc agcacctggc
     3121 ccgagttcgc ctgcgggtcg accttggcgt agatcttcgc gatcttgcct tgcgggtcga
     3181 tcaggaaggt ggtgcgtgcc gcgtaatgca cgccagctgt cgaggtgagc acgccgtacg
     3241 tcgtcgccac ctggcggtcg gcgtcggaca gcagcgggaa cggcacgtgg tacttcgccg
     3301 caaactccgc gtgcgatttc acgtcgtcga gactgacgcc caccacgtcg gcgccggcct
     3361 ggcgcagctt cgccaggtca tcgcggaagg tgcacacctc ggtggtgcag ccgggggtga
     3421 agtccttcgg gtagaagtac agcaccagcc agtgcccgtg gtagtcggcg gggctgcgcc
     3481 agtggccgtt ctggtcctgc aggcgaaatg ccggcgcggt gtcgcccact tgcgggccgg
     3541 cgtcggcggc cagcactggc gcagccagca ggccgcccaa caaggtcagt acgcacagca
     3601 acaagagacg gcgcatggcg attctccggc agagacagac agtgtcccag tgtacgctgc
     3661 ccgtcccacg cggatgccat gccggcgcct cgccggggcg ccattacgcg cccgccccgg
     3721 cgaggcgtac cgcacgcgtc agcggcgctt gatggtgacc ctgcccaccg acacgccgag
     3781 gttgatgcct tcgccatggc cggccagcgc cagcgaggtg gtgcccttgg tcaacacctg
     3841 cgccgtgccg ctcttcacca cgcccagctc ggcacccgcc tgcgcgtagc tgccgaacac
     3901 atcctcgatg ttgcgcacgt gggtgatatc gccggtgccg tggtcgatgc ggaacttgcc
     3961 ggcggtgagc ccgccgccga tcacgttgat cttcaccgcc gcatgctcgc cgttgtcgca
     4021 gcgcacggtg ccgctgccct cggcatgctt gtagacgatc gaccagccgg acagggtgaa
     4081 ctcgaggtgg catttcacgt tggcttcggc cgcgtaggcg ggcgtggccg gcgctgccgc
     4141 cagcgccacc gtacccagca gaaggacaac cgtcagggcc agggtgtgct tgctcatcgt
     4201 gatctccttg gtttgcgtca tcgcccggcc agcgttggcg cgccaccgtc acggttgcgt
     4261 gagcgccgca tggcgccgtt catcttgata tttcgctaac gctccccgca tacactgaag
     4321 ccgtcgcccc gatcggaacc ggtatgccca agtattcgct ggtgggttac gacggctcgg
     4381 acgccgcccg ccgcgcgttc gcgttcgcca tggacctggc tcgcgcctgc cacggccggg
     4441 tgcgcgtggt gtcggtgctg caggtggccg agggcggcga cacctgtgcg ctgatgatga
     4501 ccgacgccgg cgaccgccgc ggccaggaat tgcgcgacga actggcgacc atcgcgccgg
     4561 acaccgccga cctcgccgac atcgagctgg tgcacggcag ccccggtgac gtgctgctga
     4621 acgaggtggg ccagcacgcc atcgaccaca tcgtcatcgg ccacaccgag cgcggggcgc
     4681 tcgcgcgctg gctgctc
//
LOCUS       DASSVL010000103         2573 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_355499, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000103 DASSVL010000000
VERSION     DASSVL010000103.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2573)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2573)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2573
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_355499"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(125..613)
                     /locus_tag="VFM52_01775"
     CDS             complement(125..613)
                     /locus_tag="VFM52_01775"
                     /inference="COORDINATES: protein motif:HMM:NF017015.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HET8763926.1"
                     /translation="MLARYKAWADERLYAVLAGISEAELAAPTLIFAGSILRTLNHVY
                     LMDVVWKSHLLGVAHAVTTRNPEATPAFAELHDQQAGLDAWFIDYAAGLSVAQTGEVV
                     AFEFIGGGAGAMTRGEIVLHAVNHTTYHRGHVPAMLCQAGVAPPTTDLPVFLREQGQP
                     TA"
     gene            complement(643..2460)
                     /gene="lpdA"
                     /locus_tag="VFM52_01780"
     CDS             complement(643..2460)
                     /gene="lpdA"
                     /locus_tag="VFM52_01780"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015448830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004148 - dihydrolipoyl dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA];
                     GO_process: GO:0045454 - cell redox homeostasis [Evidence
                     IEA];
                     GO_process: GO:0051068 - dihydrolipoamide metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HET8763927.1"
                     /translation="MAQTIELKVPDIGDFNDVPVIEVMVKPGDHVDKDQGLVTLESAK
                     ATMEVPASSAGVVTAVKVKVGDNVKEGSVVAVVAAEASATAASLPPHAGEGGRRPDEG
                     NASRVLPSPRPSPAGGRGSQSTAPAAANATGREPDMECRMLVLGSGPGGYSAAFRAAD
                     LGLDTVLIERYGTLGGVCLNVGCIPSKALLHAAEVIESAAAMAAHGITFGKPKIELDK
                     LRGFKDKTVGKLTGGLAAMAKQRKVRAVQGVGMFVSPHELEVVHGEDKQLIRFEQAII
                     AAGSQAVRLKLFPWDDARVMDSTGALRLDDVPKNLLVVGGGIIGLEMASVYRALGSEV
                     TVVEFMDQLIPAADGDLIRPLAARLEQQGVAIHLKTKVTAAKAQKAGITCEFEGDSIP
                     ERKTFDRVLVAVGRSANGGQIGADKAGVTVTERGLIPVDAQMRTNVQHIFAIGDLVGQ
                     PMLAHKAVHEGHAAAEAAAGLKRQFEARVVPSVAFTDPEIAWVDVTEREAKQKSLDVG
                     VGKFPWAASGRALGMDRPEGFTKLIYDRATHRVVGGGIVGVHAGDLISEIALAIEMGA
                     EVGDIALTIHPHPTLGESVGMAAEVAEGTITDLYIPKRK"
     gene            complement(2471..>2573)
                     /locus_tag="VFM52_01785"
     CDS             complement(2471..>2573)
                     /locus_tag="VFM52_01785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007974307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="2-oxo acid dehydrogenase subunit E2"
                     /protein_id="HET8763928.1"
                     /translation="SLSYDHRVIDGAAAARFTTLLARLLGDMRRALL"
BASE COUNT          387 a          842 c          864 g          480 t
ORIGIN      
        1 ctatcggctg gtgggcgtgg ggctgtcggg gttcgtcgag cgcgacagct acgaagcgca
       61 gcctgaattg ttcgacatgt gaaacgtcgt cgcggtgtcc cggcaaggct tcgacgcacg
      121 cgctttatgc ggttggctgg ccttgctcgc gcaggaagac cggcaggtcg gtcgtaggcg
      181 gcgcgacgcc cgcctggcag agcatcgcgg ggacgtgacc gcggtggtac gtcgtgtgat
      241 tgaccgcatg caaaacgatc tcgccgcgcg tcatggcgcc ggcgccgccg ccgatgaatt
      301 cgaacgccac gacttcgccg gtctgcgcaa cggacaggcc cgcggcgtag tcgatgaacc
      361 atgcgtcgag cccggcctgt tgatcgtgca gttcggcaaa tgccggcgtg gcttcggggt
      421 tgcgtgtggt gacggcatgc gcgacgccga gcagatgcga cttccacacc acgtccatca
      481 ggtaaacgtg gttgagcgta cgcaggatgc tgccggcgaa gatgagcgtc ggtgcagcga
      541 gttcggcctc ggagatgccg gcgagcacgg cgtataaccg ctcgtccgcc cacgccttgt
      601 agcgcgccag catttccagc cgtcgcatcg gcgcaggcat ggctactttc gcttcggaat
      661 gtacagatcg gtaatcgtgc cttcggccac ttccgccgcc atgccgaccg attcgccgag
      721 cgtcggatgc gggtggatcg tgagcgcgat gtcaccgact tcggcgccca tttcaatcgc
      781 cagcgcgatt tccgaaatca gatcgcccgc gtgcacgccg acgatgccgc cgccgaccac
      841 gcggtgggtc gccctgtcgt agatgagctt ggtgaagcct tccgggcgat ccatccccag
      901 ggcgcggccg gatgccgccc acgggaactt gccgacgccc acgtccaggc ttttctgctt
      961 ggcttcgcgt tcggtgacgt cgacccaggc gatctcgggg tcggtgaacg caaccgatgg
     1021 caccacgcgc gcctcgaact ggcgcttcaa tccggcggcg gcttccgctg cggcatggcc
     1081 ttcatgcacg gccttgtggg ccagcatcgg ctggcccaca agatcgccga tcgcgaagat
     1141 gtgctggacg ttggtgcgca tctgcgcgtc aaccgggatc aggccgcgct cggtgacggt
     1201 gacgccggcc ttgtcggcgc cgatctggcc gccgttggcg ctgcggccga cggccaccag
     1261 cacgcgatcg aaagtcttgc gctcaggaat actgtcgcct tcaaactcgc aggtgatgcc
     1321 ggctttctgc gccttggcgg cggtcacctt ggtcttgaga tggattgcga cgccttgctg
     1381 ttcgaggcgc gcagccagcg gtcggatcag gtcgccatcg gccgcgggga tcagctggtc
     1441 catgaattcg acgacggtaa cttcgctgcc gagcgcacgg tacaccgagg ccatttcgag
     1501 gccgatgatg ccgccgccga ccacgaggag gttcttcggt acgtcatcga gccgcagggc
     1561 gccggtggaa tccatcacgc gcgcgtcgtc ccacgggaac agtttcaggc gtactgcctg
     1621 cgagcccgcg gcgatgatgg cctgctcgaa gcggatcaat tgcttgtctt cgccgtgcac
     1681 gacttccagt tcgtgcggcg agacgaacat accgacgcct tgcaccgcgc gcaccttgcg
     1741 ttgcttggcc atcgcggcga ggccgccggt gagcttgccg acggttttgt ccttgaatcc
     1801 gcgcagtttg tcgagctcga tttttggctt gccgaatgtg atgccgtgcg ccgccatcgc
     1861 cgctgccgat tcgataactt cggccgcgtg cagcaacgct ttcgatggaa tgcagccgac
     1921 gttgaggcag acgccgccca gcgtgccgta gcgttcgatg agcaccgtgt cgaggccgag
     1981 gtcggccgcg cgaaaggcgg cgctgtagcc gccgggtccg gaccccagca ccagcatccg
     2041 gcattccatg tcgggctcgc ggcccgttgc gtttgcggcg gctggcgctg tggattgact
     2101 ccctctcccg cctgcgggag agggacgggg tgagggcaga actcgcgagg catttccctc
     2161 atccggcctg cggccacctt cccccgcgtg cgggggaagg gaggcggctg tggcgctagc
     2221 ttccgcggca accaccgcga ccacgctgcc ttccttcacg ttgtcgccca ccttgacctt
     2281 caccgctgtg acgacgcccg ccgagctggc cggcacttcc attgtggcct tggccgattc
     2341 cagcgtcacc aggccctggt ccttgtcgac gtggtcgccg ggcttgacca tcacctcgat
     2401 caccggcacg tcgttgaagt cgccgatgtc gggcaccttg agttcgatcg tttgcgccat
     2461 gtccgtcacc tcacaacagg gcccggcgca tgtcgccgag cagtcgcgcg aggagggtgg
     2521 tgaagcgcgc cgccgcggcg ccgtcgatca cgcggtggtc gtaggacagc gac
//
LOCUS       DASSVL010000104         6232 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1259277,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000104 DASSVL010000000
VERSION     DASSVL010000104.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 6232)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6232)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6232
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1259277"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..723
                     /locus_tag="VFM52_01790"
     CDS             <1..723
                     /locus_tag="VFM52_01790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015447166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I tRNA ligase family protein"
                     /protein_id="HET8763929.1"
                     /translation="KSKNNGIDPQAMVDKYGADTVRLFSMFAAPPEQSLEWNEAGVEG
                     MARFLKRFWREVTTHAAQPDHPQVDPAALDGAQKALRRQLHETIQKVTGDYGQRHAFN
                     TAIAALMELLNAVGKFSDQGDQGRAVRHEVLETMVLLLNPVVPHVCHRLWQVLGHAET
                     VLEDQPWPQVDTGALVRDTLTLAVQVNGKLRGTIEVAANASKDEAEALARAQPQVVAF
                     LAGKTVRKVIVVPGKIVNIVAG"
     gene            728..1237
                     /gene="lptE"
                     /locus_tag="VFM52_01795"
     CDS             728..1237
                     /gene="lptE"
                     /locus_tag="VFM52_01795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007804646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA];
                     GO_process: GO:0043165 - Gram-negative-bacterium-type cell
                     outer membrane assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPS assembly lipoprotein LptE"
                     /protein_id="HET8763930.1"
                     /translation="MNRMLRIASLLVVALALSACGFHLRKSVSLPPSMAHMHVAGDGD
                     LQRALTRALEHAGVDVVDQGGPDVAELSLPTNAFNTESLTQGGYARITEYAVHYQVAF
                     NVTQGGKTLVPRQDISMQREYSYDATDSVGNASQVQQIQQSLITDMVQAIMFRLEAAG
                     RQPAPAATP"
     gene            1237..2253
                     /gene="holA"
                     /locus_tag="VFM52_01800"
     CDS             1237..2253
                     /gene="holA"
                     /locus_tag="VFM52_01800"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007804648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009360 - DNA polymerase III complex
                     [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta"
                     /protein_id="HET8763931.1"
                     /translation="MPANPAQFRKSLAADHLAPVYLLAGAELLVLEAADALRARAREL
                     GHAEREVLEVGAHFDWDNLARAAAGMSLFATHRLIDLRLPTGRPGVDGAKAITAYCAD
                     PPPDVTLLITAMEWSNKHDGAWSKKLDAAGMQVVFNAPRPNEWNAWIDARLGSRGLTA
                     TPDAVALLADRVEGNLLAAAQEVDKLAVLRAGDTGRIDADTMESLVADSARFDVFKLT
                     DAALAGDGARALRILAGLRAEGDEVIALMGWLVNQLQLALRLANARDFGAQARAERLW
                     PAREQLFRKALRRGPREHWLQCLARAARIDRMAKGREQGDAWLEAERLIAAIAEPRTA
                     RVLA"
     gene            2418..3050
                     /gene="nadD"
                     /locus_tag="VFM52_01805"
     CDS             2418..3050
                     /gene="nadD"
                     /locus_tag="VFM52_01805"
                     /EC_number="2.7.7.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007082847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate-nucleotide adenylyltransferase"
                     /protein_id="HET8763932.1"
                     /translation="MRPLALFGGTFDPIHIGHLTVAWEAAELLDAEVRLLPANVPPHR
                     AMPIASAAERVAMLRVALAGQSRLVLDPRELARRGPSYTVDTLRELRAEQGERPLVLL
                     LGADAFAGLPGWHAWRALFDLAHIGVLSRPGVTAPLAPELLAAIATRRTTDPAPLRAS
                     PAGCVIDLAVTPLEVSATRIRELLAAGRDPRYLLPAGLFDDPALLAPYRH"
     gene            complement(3074..4789)
                     /locus_tag="VFM52_01810"
     CDS             complement(3074..4789)
                     /locus_tag="VFM52_01810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015036 - disulfide oxidoreductase
                     activity [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis protein DipZ"
                     /protein_id="HET8763933.1"
                     /translation="MIVLLLAFLGGVFTLFSPCILPVLPFVLARAGRSFARSGVPMLL
                     GMAASFTVVATLAAVGGGWAVHANQYGRGVALGVLALFGVGLLSPRFAAWCARPLTRL
                     GQRLVPAATTDSIPRAFGLGAGIGLVWAPCAGPILGIVLTTAALRGAGVTTTLLLLTY
                     AFGAASALAIVLLAGGQLGALLRRLPGMGEALRRIAGVAVLASVAAIALGVDTGALTR
                     LSLPSTTRTEQALMNTLQPIPAAVAAPTSSTLAVEGELPPLAGATGWLNSPALTREAL
                     RGKVVLVDFWTYSCINCLRALPYIEAWAAKYRDHGLVVIGVHSPEFAFEKDRANVAAA
                     VQRLGITFPVAIDSNYAIWQGFDNQYWPADYFIDARGRIRHHTYGEGGYREGEDVIRT
                     LLAEAGQQNLPGGYVDPNAHGAEAPDSGDPTRSPETYVGYARSAHFASGRIAHDDAFD
                     YHTPASLAANQWGLTGRWTLHEQAAVLDAPGGSITYRFRGRDLHLVLGPGADGKPVRF
                     RITLDGAPPGADHGMDTDAQGNGTVTAQRLYQLVRQAGDATRTRTFTITFEGAGVRAY
                     AFTFG"
     gene            4953..6020
                     /locus_tag="VFM52_01815"
     CDS             4953..6020
                     /locus_tag="VFM52_01815"
                     /EC_number="1.13.12.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015447175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016703 - oxidoreductase activity, acting
                     on single donors with incorporation of molecular oxygen,
                     incorporation of one atom of oxygen (internal
                     monooxygenases or internal mixed function oxidases)
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitronate monooxygenase"
                     /protein_id="HET8763934.1"
                     /translation="MSTFAQDFGLDLPLVQAPMAGSTTPALVAAACNAGALGSFGAGY
                     TAPEAIIERAREIRALTSRPFALNLMVLPDEFVPDMAAVTRARRLLDALMEREGLAVR
                     TTLPARWAPRFSDQFAALCEARPAVASFVFGLLDAARVAELKRRGIRVVGTATTPAEA
                     VAWAERGAAAVCVQGAEAGGHRGDFDGAAAPSMIGLFALVPQARHALAAAGHAIPVIA
                     AGGIMDGAGMRAAEVLGAAASQLGTAFLACPESAAADAWKRDLAGASAGRVVTIRSVS
                     GRAARGLRNRYVEAMEGAAGELPGYPFLNALTAPLRRAAAAAGRGDLMSEWCGQGVPV
                     TRALPAAELVRVLADEYRRVA"
     gene            6086..>6232
                     /locus_tag="VFM52_01820"
     CDS             6086..>6232
                     /locus_tag="VFM52_01820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011346691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="guanosine polyphosphate pyrophosphohydrolase"
                     /protein_id="HET8763935.1"
                     /translation="MTMLSERFTAAVDHARRVHATQVRKGTGIPYLCHLLGVASLVLE
                     YGGDE"
BASE COUNT          896 a         2180 c         2256 g          900 t
ORIGIN      
        1 aagtccaaga acaacggcat cgatccgcag gccatggtgg acaagtacgg cgccgatacg
       61 gtgcgcctgt tctccatgtt cgccgcgccg ccggagcaat cattggagtg gaacgaggcc
      121 ggcgtggaag gcatggcgcg cttcctcaag cgcttctggc gcgaggtgac gacgcatgcg
      181 gcgcagccgg atcatccgca ggtcgatccc gccgcgctcg acggcgcgca gaaggcgttg
      241 cgccgccagc tgcacgaaac catccagaag gtcaccggcg actacggcca gcgccacgcg
      301 ttcaacaccg cgatcgccgc gctgatggag ctgctgaacg cggtcggcaa gttcagcgac
      361 cagggcgacc agggccgcgc ggtgcgccac gaggtgctgg aaaccatggt gctgctgctg
      421 aacccggtgg tgccgcacgt ctgccatcgg ctgtggcagg tgctgggcca cgcggaaacc
      481 gtgctcgagg accagccgtg gccgcaggtc gacaccggcg cgctggtgcg cgatacgctc
      541 acgctcgcag tgcaggtcaa cggcaagctg cgcggcacca tcgaggtggc cgccaacgcg
      601 tcgaaggacg aggccgaggc gctggcgcgc gcgcagccgc aggtggtcgc cttcctcgcc
      661 ggcaagaccg tgcgcaaggt gatcgtggta ccgggcaaga tcgtcaacat cgtcgcaggg
      721 tgaaccgatg aaccgcatgc ttcgcatcgc gtcattgctg gtggttgcgc tcgcgctttc
      781 cgcgtgcggg ttccatttgc gcaagagcgt cagcctgccg ccgtcgatgg cgcacatgca
      841 cgtcgccggc gacggcgacc tgcaacgcgc gctcacccgc gcgctcgaac acgccggcgt
      901 cgacgtcgtc gaccagggcg gcccggacgt ggccgagctc agcctgccga ccaacgcgtt
      961 caataccgag tcgctcaccc agggcggcta cgcgcgcatc accgaatacg ccgtgcacta
     1021 ccaggtggcg ttcaacgtga cgcagggcgg caagacgctg gtgccgcggc aggacatctc
     1081 gatgcagcgc gaatacagct acgacgccac cgacagcgtg ggcaacgcct cgcaggtgca
     1141 gcagatccag cagagcctga tcaccgacat ggtgcaggcg atcatgttcc ggctcgaagc
     1201 cgccggtcgc caaccggcgc ctgccgccac gccctgatgc cggccaaccc cgcccagttc
     1261 cgcaaatcgc tggccgccga tcatctggct ccggtgtatc tcctggctgg cgcggaactg
     1321 ctggtgctgg aagctgccga cgcgttgcgc gcgcgggctc gtgagctggg ccatgccgag
     1381 cgcgaggtgc tggaggtcgg cgcgcatttc gactgggaca acctcgcgcg cgccgctgcc
     1441 ggcatgtcgc tgttcgccac gcaccggctg atcgacctgc gcctgcccac cggccgcccc
     1501 ggcgtcgacg gcgccaaggc catcaccgcg tactgcgccg acccgccgcc cgatgtcacc
     1561 ttgctcatca ccgcgatgga gtggagcaac aagcacgatg gcgcatggag caagaagctc
     1621 gacgccgccg gcatgcaggt ggtgttcaac gcgccgcgac cgaacgaatg gaacgcgtgg
     1681 atcgacgccc ggctgggttc gcgcgggctg acggccacgc cggatgcggt ggcgctgctg
     1741 gcggaccgcg tcgaaggcaa tctgcttgcc gccgcgcagg aggtcgacaa gctcgccgtg
     1801 ctgcgcgccg gcgataccgg ccgcatcgac gccgacacca tggaaagcct ggtcgccgac
     1861 agcgcgcgct tcgacgtgtt caagctgact gacgccgcgt tggccggcga cggcgcgcgt
     1921 gcgctgcgca tcctggccgg cctgcgcgcc gaaggcgacg aggtgatcgc gctgatgggc
     1981 tggctggtca accagctgca gcttgcgctg cgcctcgcca atgcccgcga tttcggcgcc
     2041 caggcccgtg ccgagcgcct gtggcccgcg cgcgagcagc tgttccgcaa ggccctgcgc
     2101 cgcggcccgc gcgaacactg gctgcaatgc ctggcgcgtg ccgcgcgcat cgaccgcatg
     2161 gccaagggcc gcgagcaggg cgatgcgtgg ctggaagccg aacggctgat cgcggccatt
     2221 gccgagccgc gcaccgcgcg ggtgctggcg tgaggccggc attgctcccg ctaccactgt
     2281 tgtggaagaa gggcggtcag cgtgcaggtc gcggtggcga agttgtgctc cctctcccct
     2341 cttgggagga gagggctggg gtgagggggc cgctcttgcc gcggtgtggg caaactgctg
     2401 cgcattcggc ctgacccatg cgcccccttg ccctctttgg cggcaccttc gacccgatcc
     2461 acatcggcca tctcaccgtg gcgtgggaag ccgccgagct gctcgacgcc gaggtgcgcc
     2521 tgctgccggc caatgtgccg ccgcatcgcg ccatgccgat agccagcgcg gctgaacggg
     2581 tggcgatgct gcgcgttgcg cttgccggcc agtcgcgcct ggtgctcgac ccccgcgaac
     2641 tggcgcgccg cggcccttcg tacaccgtgg acaccttgcg cgagctgcgt gcggagcagg
     2701 gcgaacgccc gctggtgctg ctgctcggcg ccgacgcgtt tgccggcctg ccgggctggc
     2761 acgcgtggcg cgcgctgttt gatctcgcgc acatcggcgt gctcagccgt cccggcgtga
     2821 ccgccccgct tgctcccgaa ctgctggcgg cgatcgccac gcggcgcacg accgaccccg
     2881 caccgctgcg cgccagccct gccggctgcg tcatcgacct cgccgtcacc ccgctcgaag
     2941 tctccgccac gcgcattcgc gagctgctcg ccgcggggcg cgacccgcgc tacctgctgc
     3001 cggccgggct gttcgacgac ccggcgctac tggcgccgta tcgccactga tcccgctggc
     3061 gcaggcttgg gcctcagccg aaggtgaacg cgtatgcgcg cacgccggcg ccctcgaagg
     3121 tgatggtgaa ggtgcgcgtg cgagtggcat cgcccgcctg gcgcaccagc tggtagaggc
     3181 gctgtgcggt gaccgtgccg ttgccctggg catcggtatc catgccgtgg tcggcgccgg
     3241 gcggtgcgcc gtcgagcgtg atgcggaagc gcaccggctt gccgtccgcg ccggggccga
     3301 gcacgaggtg caggtcgcgg ccgcggaagc ggtaggtgat gctgccgccc ggcgcatcga
     3361 gcacggcggc ctgctcgtgc agcgtccagc ggccagtgag gccccattgg ttggccgcca
     3421 ggctggccgg cgtgtggtag tcgaacgcgt cgtcgtgggc gatccggccg ctggcgaaat
     3481 gcgcgctgcg cgcatagccc acgtaggttt ccggcgagcg cgtcgggtcg ccggaatccg
     3541 gcgcctcggc accgtgcgca ttcgggtcga cgtacccgcc gggcaggttc tgctgcccgg
     3601 cttcggccag cagcgtgcgg atcacgtcct cgccctcgcg atagccgcct tcgccgtagg
     3661 tgtggtggcg gatgcggccg cgcgcgtcga tgaagtagtc cgccggccag tactggttgt
     3721 cgaagccctg ccagatcgcg tagttcgagt cgatcgcgac cgggaaggtg atgccgagcc
     3781 gctgcaccgc cgcggcgacg ttggcgcggt ccttctcgaa cgcgaactcc ggcgagtgca
     3841 cgccgatcac caccagcccg tggtcgcggt actttgccgc ccaggcctcg atgtagggca
     3901 gcgcgcgcag gcagttgatg caggaatacg tccagaaatc gaccagcacc accttgccgc
     3961 gcagggcttc gcgggtgagc gcgggactgt tgagccagcc ggtggcgccg gcgagcggag
     4021 gcaattcgcc ttcgaccgcg agcgtgctgc tggtcggcgc cgcgaccgcc gcggggatcg
     4081 gctgcagggt gttcatcagc gcctgctcgg tgcgcgtggt cgacggcagc gacagccggg
     4141 tcagcgcgcc ggtgtcgacg cccagcgcga tcgcggcgac gctggccagc accgcgacgc
     4201 cggcgatgcg gcgcaaggct tcgcccatgc ccggcagccg tcgcagcaac gcaccgagct
     4261 ggccaccggc gagcaatacg atggcgagcg cgctggcggc gccgaacgcg taggtgagca
     4321 gcagcaaggt ggtggtgacg cccgcgccgc gcagcgccgc ggtggtcagc acgatgccga
     4381 ggatcggtcc cgcgcatggc gcccacacca agccgatgcc ggctccgagg ccgaacgcgc
     4441 gcgggatcga atccgtcgtg gccgccggca ccaggcgctg cccgaggcgc gtcagcgggc
     4501 gggcgcacca cgccgcgaac cgtggcgaca gcaggcccac gccgaacagc gccagcaccc
     4561 ccagcgccac gccgcgcccg tactggttcg cgtgcaccgc ccagccgccg cctaccgccg
     4621 ccagcgtcgc taccacggtg aagctcgccg ccatgcccag cagcatcggc acaccgctgc
     4681 gcgcgaacga gcgcccggcg cgcgccagca cgaacggcag caccggaagg atgcacgggc
     4741 tgaacagcgt gaacacgcca ccgaggaagg cgagcagcaa cacgatcatg aagacgcccg
     4801 agtcgttgcg atcacctgtc agcttacgct gccggcgact tgtggatcgg ctgcattccg
     4861 acgacttcga gggcgacatg gtcgggatga actccgatcc aagagctcat ggcgtgatcg
     4921 ataatgcgca gctgacgttg ccggagccat cgatgtccac ctttgcgcag gatttcggtc
     4981 tcgatctacc tttggtgcag gcgccgatgg cgggttcgac gacgccggcg ctggtcgctg
     5041 ccgcgtgcaa cgccggtgcg ctgggttcgt tcggggcggg gtacacggcg cccgaggcga
     5101 tcatcgagcg ggcgcgggaa atccgcgcgt tgacctcgcg cccgtttgcg ttgaacctga
     5161 tggtgctgcc ggacgaattc gtgccggaca tggcggccgt gacgcgggcg cgtcgtctgc
     5221 tcgatgcctt aatggagcgc gagggcctgg ccgtgcgcac cacgttgccg gcgaggtggg
     5281 cgccgcggtt ttccgaccag ttcgccgcgt tgtgcgaggc gcgcccggcg gtggcgagct
     5341 tcgtgttcgg cctgctcgat gccgcgcgcg tcgcggagct gaagcggcgc ggcatccgcg
     5401 tggtcggcac cgccaccacg ccggccgagg cggtggcatg ggccgagcgc ggcgccgctg
     5461 cggtgtgcgt gcagggcgcc gaggccggtg gccatcgcgg cgatttcgac ggcgccgccg
     5521 cgccgtcgat gatcggcttg ttcgcgctgg tcccgcaggc gcgtcacgcc ctggcggcag
     5581 cgggccacgc gattccggtg atcgctgccg gcggcatcat ggacggcgcc ggcatgcgcg
     5641 cggccgaggt gctgggcgcc gcggctagcc agctcggcac ggcgttcctc gcgtgcccgg
     5701 agtcggccgc ggcagacgcc tggaagcgcg acctcgccgg ggcaagcgcc gggcgcgtgg
     5761 tgaccatccg cagcgtgtcc ggtcgcgccg cgcgcggctt gcgcaaccgc tacgtggaag
     5821 cgatggaagg cgcggcgggc gagctgcccg gttatccgtt cctgaacgca ctgaccgcgc
     5881 cgctgcggcg tgccgcggcc gcggccgggc gcggcgatct gatgtcggaa tggtgcgggc
     5941 agggtgtgcc ggtgacgcgt gcgctgccgg cggcggagct ggtgcgcgtg ctcgccgatg
     6001 aataccggcg cgtggcgtga accgtcgcgg cccatgagac aaccgcacgc catgctggca
     6061 tggcaacgac cacagggaga atcgcatgac catgctcagt gaacgcttca ccgccgccgt
     6121 cgaccacgcc cgccgcgtgc atgccaccca ggtgcgcaag ggcaccggga ttccctacct
     6181 ctgccacctg ctcggtgtcg ccagcctggt gctggaatac ggcggcgatg ag
//
LOCUS       DASSVL010000105         2264 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_863892, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000105 DASSVL010000000
VERSION     DASSVL010000105.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2264)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2264)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2264
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_863892"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..220)
                     /locus_tag="VFM52_01825"
     CDS             complement(<1..220)
                     /locus_tag="VFM52_01825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007510179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HET8763936.1"
                     /translation="MEDLSAISSFVRVVEARSFAAAAVQLGMTPSGVSRAVSRLEERI
                     GVRLLFRSTRALRLTDDGESFYERCKAIL"
     gene            364..1605
                     /locus_tag="VFM52_01830"
     CDS             364..1605
                     /locus_tag="VFM52_01830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015446397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HET8763937.1"
                     /translation="MKKQLILSGLVAVAAAGSWAMLGEHGNSHAQAAGAGSALPEVTV
                     ARALLRPVSNSAEFTGRVQPVDSVQVRPRVGGYVASVAFKEGALVHQGDVLFRIDPRP
                     FQAEVDRLTANRTQALAELGLAQANAQRGHRLLDQHAIAQEEADRLDTAAQSARATLA
                     AADAELATAKLNLGFTAVRAPIDGRVSNVRITPGNLVGSNDVLTSVVSVNPVYVYFDV
                     DEHTWLKLDHLRATATRDGRSPRIEAAMELADESGYPHTGRIDFVDNQLHTGSGTMRL
                     RAVFDNTSGLFTPGLYARIRLSSGQPQPRLLIDDRAVGTDLGNQFVYVVDAQHKVEYR
                     KVDTGPLAYGLRVVDSGLKPGDVVVVNGLQRVRPGVEVNPKQVAMDHRLDSRDKALVE
                     AGGRGDSRTAMTTPPRHDPQG"
     gene            1745..>2264
                     /locus_tag="VFM52_01835"
     CDS             1745..>2264
                     /locus_tag="VFM52_01835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015446396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HET8763938.1"
                     /translation="MKNIAQFFVDRPIMAAVLSLLFVITGSIAVFQLPISEYPEVVPP
                     TVVVRANYPGANPKVIAETVATPLETQINGVEGMLYTSSQATSDGVMTLTVTFALGTN
                     LNDAQVEVQNRVAQALPRLPEEVQRLGVTTQKSSPDLTMVVHLTSPDKRYDMLYLSNF
                     ARLHVKDVLGRLN"
BASE COUNT          400 a          811 c          717 g          336 t
ORIGIN      
        1 ccaggatcgc cttgcagcgc tcgtagaacg attcgccgtc gtcggtaagc cgcagcgccc
       61 gcgtgctgcg gaacagcaag cgcacgccga tccgttcttc cagccgagac accgcgcggc
      121 tcacgccgga cggcgtcata cccagttgca cggcggcggc ggcgaaactg cgcgcctcca
      181 cgacgcggac gaagctcgat atggcggaaa ggtcttccat gcccgccatt gtgacgtcat
      241 tcgtgactgc gagtcactag tggagttcac aaatttgggt ttttctgtac ccaacggtat
      301 acctattatt cgcctcccca ctcgtgctgc aacgccgcac ggcccactcc agggagcgcc
      361 cacatgaaga agcaactgat cctgtccggt ctcgtcgcgg tggccgccgc tggcagctgg
      421 gccatgctcg gcgaacatgg caacagccac gcccaggccg ctggcgccgg cagcgccctg
      481 ccggaagtga cggtggcccg cgccctgctg cgcccggtga gcaacagcgc agagttcacc
      541 ggccgcgtgc agccggtgga cagcgtgcag gtgcgcccgc gcgtgggtgg ctacgtggcc
      601 tcggtggcgt tcaaggaagg cgccctggtg caccagggcg acgtgctgtt ccgcatcgac
      661 ccgcgcccgt tccaggccga ggtggaccgg ctcaccgcca accgcaccca ggcgctggcc
      721 gaactgggcc tggcccaggc caacgcgcag cgcggccacc gcctgctcga ccagcatgcg
      781 atcgcgcagg aggaggccga ccgcctcgac accgccgcac agagcgcgcg cgccacgctg
      841 gccgccgccg acgccgagct ggccacggcc aagctcaacc tgggcttcac cgccgtgcgc
      901 gcacccatcg acggccgcgt cagcaacgtg cgcatcacgc cgggcaacct cgtcggcagc
      961 aacgacgtgc tgaccagcgt ggtttcggtg aacccggtct acgtgtactt cgacgtggac
     1021 gagcacacct ggctgaagct ggaccacctg cgcgccacgg cgacgcggga cggtcgcagc
     1081 ccgcgcatcg aggctgcgat ggaactggcc gacgagagcg gctacccgca caccggccgc
     1141 atcgacttcg tcgacaacca gctgcacacc ggctccggca cgatgcggct gcgcgcggtg
     1201 ttcgacaaca ccagcggtct gttcaccccc ggcctgtacg cgcgcatccg cctttcgagc
     1261 ggccagccgc agccgcgcct gctgatcgac gaccgcgccg tgggcaccga cctcggcaac
     1321 cagttcgtct acgtggtgga cgcccagcac aaggttgaat accgcaaggt ggacaccggc
     1381 ccgctggcat acggcctgcg cgtggtggac agcggcctca agcccggcga cgtggtggtg
     1441 gtgaacggcc tgcagcgcgt gcgccccggc gtcgaggtga acccgaagca ggtggcgatg
     1501 gatcaccgcc tggacagccg cgacaaggca ctggtagagg cgggcgggcg tggcgattcg
     1561 cgcaccgcga tgacgacgcc gccaaggcac gacccgcaag gctgagcccc tcgcctttct
     1621 tcctttcccc tttagggaaa aggccgatga gcctttctcc cactcgcctc tgggaaggga
     1681 ctgacgaacc tttcttcctc tcgcctctcc ggggagagga agtcgactcc catcgagaca
     1741 aaccatgaaa aacatcgccc agtttttcgt cgaccgaccg atcatggccg ctgtgctgtc
     1801 gctgctgttc gtcatcaccg gcagcatcgc ggtgttccag ctgccgatca gcgaataccc
     1861 cgaagtggtg ccgcccaccg tggtggtgcg cgccaactac cccggcgcca accccaaggt
     1921 gatcgccgag accgtggcca cgccgctgga aacgcagatc aacggcgtgg aaggcatgct
     1981 ctacacctcc tcgcaggcca ccagcgacgg cgtgatgacg ctcaccgtga ccttcgcgct
     2041 cggcaccaat ctcaatgacg cccaggtgga agtgcagaac cgcgtggcgc aggccttgcc
     2101 gcgcctgccg gaagaagtgc aacggctcgg cgtgaccacg cagaagagct cgcccgacct
     2161 caccatggtc gtgcacctca cctcgcccga caaacgctac gacatgttgt atctgtcgaa
     2221 cttcgcgcgg ctgcacgtga aggacgtgct gggccgcctg aacg
//
LOCUS       DASSVL010000106         2471 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_213996, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000106 DASSVL010000000
VERSION     DASSVL010000106.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2471)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2471)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2471
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_213996"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..179
                     /locus_tag="VFM52_01840"
     CDS             <1..179
                     /locus_tag="VFM52_01840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013722692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="mercuric reductase"
                     /protein_id="HET8763939.1"
                     /translation="VAPEAGELIQAAALAIHARMTVDELADQLFPYLTMVEGLKLAAQ
                     TFSKDVTQLSCCAG"
     gene            188..1723
                     /locus_tag="VFM52_01845"
     CDS             188..1723
                     /locus_tag="VFM52_01845"
                     /inference="COORDINATES: protein motif:HMM:TIGR01845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux transporter outer membrane subunit"
                     /protein_id="HET8763940.1"
                     /translation="MLFRGIRKRLARSWLGATLGIGLSACAVGPIFQRPAPPSADSYV
                     TAHHLPDLQLGEGETAQHLSTGEAVPREWWRMFHSPALDGMVHQALGANPSIEAAQYT
                     LASARQELREANAAYVPQIDAGVSAERQKGPPLALGIRPDHALPTYDLYAVGATVGFT
                     PDVFGLTARRVEQQRALAENRAYQLAALQLSVTGNVVAQSLRLAAARRRLQLAEDLVA
                     NDEQALALVRQRAAAGKVATMDTWSAQARRDEDQAALPLLRHEITTAETALAVLLGQS
                     PAAWTAPELNLDDLVLPAQLPLTLPSELVRQRPDILAAEARLHAASAAVGVADAQMYP
                     QFTLSASVGTAALTTQALGNGSNLVWTLLGGLTAPIFHGGALVARKRAAVDHFHAELA
                     LYRDTVLQGLGQVANVLHALGHHAELAASRRGAWSSNEALQQLQRQRYASGKVGELAW
                     LDSQRRALRAHSAYEQALVLRYLDSADLMVALGGHWPTPTVQPCCNQATDGCAARTHP
                     LLR"
     gene            1692..>2471
                     /locus_tag="VFM52_01850"
     CDS             1692..>2471
                     /locus_tag="VFM52_01850"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HET8763941.1"
                     /translation="MPRGPIPFCAERHMSLFPGKLAAMHAWIHSRRGRRQVAVWLGLL
                     AVAVVVAARRPPTVTVATVQRGNLAAEVEGTGTVTADTVADLASRITGRVEQVYMDEG
                     DVVHKGQQLALLDQGEQRHGLDAARARLGAATATARERRHEWQREQGLITTGAVGKEE
                     AQQYQERDAVAQGAMDAAKAELALAQYRLSLTDIRSLSDGVVTRRWVVPGAAVVPGQA
                     MFTVADTNLVYVDTHADQSAGGELRRGQPATVLLRGHDGQPL"
BASE COUNT          388 a          836 c          876 g          371 t
ORIGIN      
        1 ccgtggcgcc ggaagcgggt gaactgatcc aggcggcggc actggcgatc cacgcccgca
       61 tgacggtgga cgagctagcc gatcagctgt ttccgtacct gaccatggtc gaagggctca
      121 agctcgcggc gcagaccttc agcaaggacg tgacgcagct gtcgtgttgc gccggctgac
      181 tgccgccatg ctgttccgcg gaatccgcaa gcgcctggca cggtcatggc tgggtgcgac
      241 gctcggcatc gggctcagcg cctgcgcggt tggccccatc tttcagcggc cggctcctcc
      301 ctctgcggac agctacgtca cggcgcacca cctgcccgac ctgcagctcg gcgagggtga
      361 aaccgcccag cacctgtcga ctggcgaggc cgtgccgcgc gagtggtggc ggatgttcca
      421 ctcccccgcc ttggacggca tggtccacca ggcactgggc gcaaacccga gcatcgaagc
      481 cgcccagtac acgctggcca gcgcacggca ggaactgcgt gaagccaacg cagcatatgt
      541 gccccaaatt gacgctggcg tctctgccga acggcagaaa ggtccgccgc tggcgctggg
      601 catccggccc gaccacgcgt tgcccactta tgacctctac gcggttggcg ccacggtcgg
      661 cttcacgccc gacgtgttcg gccttaccgc acgcagggtc gagcagcagc gggcactggc
      721 ggaaaaccgc gcctatcagc tagcggcgtt gcagctcagc gtgaccggca acgtggtggc
      781 gcagtcgctg cgcctggcgg ccgcacgacg gcgattgcag cttgccgaag acctggtggc
      841 gaatgacgag caggcccttg cactggtgcg ccagcgtgca gcggccggca aggtagccac
      901 catggatacg tggtcggcgc aagcgcggcg ggatgaagac caggccgcgc tgccgctgct
      961 acggcacgag atcaccaccg ccgagacggc tctggcggtg ctgcttggcc agtcgccggc
     1021 ggcgtggacg gcgcccgagt tgaatctgga tgacctggtg ctgcccgcgc aattgccgtt
     1081 gacgttgcct tcggaactgg tgcgccagcg cccggacatc cttgccgccg aggcgcgcct
     1141 gcatgcggcc agcgccgccg tcggcgtggc cgatgctcag atgtatccgc agttcacgtt
     1201 gtcggcgtcc gtgggaacgg cggcgctgac cacgcaggcg ctgggtaacg gttccaatct
     1261 cgtctggacg ctgcttggcg gcctgacggc gccgatcttc catggcggtg cactggtcgc
     1321 gcggaaacgg gcggcggtcg atcacttcca cgcggagctg gccctgtatc gcgacacggt
     1381 gctgcaaggg ctgggacagg tggcgaatgt gctgcatgcg ctcgggcacc acgcggaact
     1441 cgccgcctcc cggcgcggtg cctggagttc gaacgaggcg ttgcagcaat tgcagcggca
     1501 acgctacgcc agcggcaagg tcggcgagct ggcgtggctc gacagccagc gccgggcact
     1561 gcgggcgcat tcggcgtacg agcaggccct ggtgctgcgc tatctcgaca gcgccgatct
     1621 gatggtggcg ctgggcggcc actggccaac gcccactgtc cagccgtgct gcaaccaggc
     1681 cacggacggg tgtgccgcgc ggacccatcc ccttttgcgc tgagcgccac atgtctctgt
     1741 tcccaggaaa gcttgccgcc atgcatgcat ggattcactc ccgccgcggt cgccgccagg
     1801 tcgccgtgtg gttggggctg ctggccgtcg ccgtggtcgt cgcggcacga cgcccaccga
     1861 ccgtgacggt cgccaccgtg cagcgcggca acctggccgc cgaagtggag gggaccggca
     1921 cggtcaccgc cgacaccgtg gcggatctcg cgtcccgcat caccgggcgc gtggaacagg
     1981 tgtacatgga cgaaggcgac gtcgtgcaca agggccagca gttggcgttg ctcgaccagg
     2041 gcgaacagcg ccatgggctc gacgcagcgc gggcgcggct tggcgccgcg acggcaaccg
     2101 cgcgcgaacg gcgccacgaa tggcagcgcg agcaaggctt gatcaccacc ggcgcggtgg
     2161 gcaaggaaga agcgcagcaa taccaagagc gcgacgccgt ggcgcaaggt gccatggatg
     2221 ccgccaaggc cgagcttgcg ctggcgcaat accgcctgtc cctgaccgat atccgcagcc
     2281 tgtccgatgg cgtggtgacc cggcgctggg tggtgccagg cgcggcggtg gtgccggggc
     2341 aggcgatgtt taccgtggcc gacacgaatc tggtgtacgt ggacacccat gccgaccaga
     2401 gtgctggcgg cgaactccgc cggggccagc cggccaccgt cctgctgcgc ggccacgatg
     2461 gccagccgct g
//
LOCUS       DASSVL010000107         3080 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_666180, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000107 DASSVL010000000
VERSION     DASSVL010000107.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3080)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3080)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3080
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_666180"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(368..1663)
                     /locus_tag="VFM52_01855"
     CDS             complement(368..1663)
                     /locus_tag="VFM52_01855"
                     /EC_number="2.3.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008211568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046912 - acyltransferase activity, acyl
                     groups converted into alkyl on transfer [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="citrate synthase"
                     /protein_id="HET8763942.1"
                     /translation="MSGPKIVKLVDESNQRSAELPLVEGTLGPACIDISTLYKQTGHY
                     TIDPGFGATASTKSAITYIDGEKGILLYRGYPIEQLAEKSSFLEVAYLLLNGELPSAP
                     EFTKFKDDVAHHTMMHESLKNFFQGFHHDAHPMAMLAASVASLSAFYHEDLDVENPAD
                     RKLAAIRLIAKMPTIAAACYRYSIGWPFRYPRNNLEYADRFLHMMFEVPSEPLEMNPV
                     VAKALDLLFILHADHEQNASTSTVRLVGSTGANPYASVAAGITALWGPAHGGANEAVL
                     KMLNEIGTMDNVDSAIKRAKDKNDNFRLMGFGHRVYKNFDPRATIIRNTCHEVLDALG
                     VNDPLLDVAMKLEEAALKDEYFVSHKLYPNVDFYSGIIYKALGIPTEMFTVMFAIART
                     AGWISHWIEQHETPGSRIGRPRQVYVGHAKRDYVATDKR"
     gene            complement(1897..2142)
                     /locus_tag="VFM52_01860"
     CDS             complement(1897..2142)
                     /locus_tag="VFM52_01860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019466242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type B 50S ribosomal protein L31"
                     /protein_id="HET8763943.1"
                     /translation="MKPDIHPNYHPVVFQDLSSDFAFLTRSTIATKDTIKWEDGNEYP
                     LVKVDISSHSHPFYTGKQKTLDVGGRVDKFRKRYAHK"
     gene            complement(2215..>3080)
                     /locus_tag="VFM52_01865"
     CDS             complement(2215..>3080)
                     /locus_tag="VFM52_01865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008210574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="phosphate acyltransferase"
                     /protein_id="HET8763944.1"
                     /translation="DVIDMRIQRLGLRLKAGVDFELTNIHDDPRFNEYWRQYHALTER
                     RGVTPDAAKNLMRSRPTLIAAMMVERGEADAMLCGLVGRYHKKLGYLRSVFGLDPGVR
                     GTAAMSCVINDKGTWFFLDTHVQLDPDAEQIAEATLQASYRLKLFGIEPKVALLSHSN
                     FGSHDNAPAAKMHRVREILKARVPKLDVDGEMQADTAWDEALRRRIFPNTTLTGRANL
                     FVMPNLDSANIVYNMVRVMTDGVAIGPILMGVDRPAHILTTASSVRRVVNMTALAAVD
                     AQIRAAQHRGG"
BASE COUNT          492 a          978 c         1069 g          541 t
ORIGIN      
        1 cgcgctgcgc caggcgccgc tcgaccgcat cgacgagcac ccgatgcggc gtgcgccgct
       61 cgcggctgtc gaggccctgc tcgcgcagga ccaggccgac ggcgagctcg aacgcatgct
      121 ggcgcgggtc gctccgcgcc agcggtaacc gccacgcacc gtgggtcggg cgtcagcccg
      181 acgagcgccc cggaaaagca tgtcgggacg gatcccgacc cacggcgtcg acgccaggcg
      241 tggggcgggc tttgcaacgg cgcacgcggc taccggcagc cgcactcgtg gcagggtcgc
      301 cgcccggaaa acgaaacgcc ccggcaagcc ggggcgtttc gttttccaag tggtgccgac
      361 gctgcgctca gcgcttgtcg gtggcgacgt agtcgcgctt ggcgtggccg acgtagacct
      421 gccgcgggcg gccgatgcgc gaccccgggg tttcgtgctg ctcgatccag tgcgagatcc
      481 agccggcggt gcgcgcgatg gcgaacatca cggtgaacat ctcggtcggg atgccgagcg
      541 ccttgtagat gatgccggag tagaagtcga cgttcgggta cagcttgtgg ctgacgaagt
      601 actcgtcctt cagcgcggcc tcctcgagct tcatcgccac gtccagcagc ggatcgttca
      661 cgcccagcgc gtcgagcacc tcgtggcagg tgttgcggat gatcgtggcg cgcgggtcga
      721 agttcttgta cacgcgatgg ccgaagccca tcaggcggaa gttgtcgttc ttgtccttcg
      781 cgcgcttgat cgccgagtcg acgttgtcca tcgtgccgat ctcgttgagc atcttcagca
      841 cggcctcgtt cgcaccgccg tgcgccgggc cccacaacgc ggtgatgccg gccgccaccg
      901 aggcgtacgg attcgcgccg gtggaaccga ccaggcgcac ggtcgaggtc gacgcgttct
      961 gctcgtggtc ggcgtgcagg atgaacagca ggtcgagcgc cttggccacc accgggttca
     1021 tttccagcgg ctcgctcggc acctcgaaca tcatgtgcag gaagcggtcg gcgtactcga
     1081 ggttgttgcg cgggtagcgg aacggccagc cgatcgaata gcggtagcag gcggcggcga
     1141 tggtcggcat cttcgcgatc aggcggatcg cggcgagctt gcggtcggcc gggttctcga
     1201 cgtcgagatc ctcgtggtag aacgccgaca gcgaggcgac cgaggcggcc agcatggcca
     1261 tcggatgcgc gtcgtggtgg aagccctgga agaagttctt cagcgactcg tgcatcatcg
     1321 tgtggtgcgc gacgtcgtcc ttgaacttgg tgaactcggg cgcgctcggc aactcgccgt
     1381 tgagcagcag gtaggccact tcgaggaagc tcgacttctc ggccagctgc tcgatcggat
     1441 agccgcggta cagcaggatg cccttctcgc cgtcgatgta ggtgatcgcg ctcttggtgc
     1501 tcgccgtggc gccgaaacca ggatcgatgg tgtagtgccc ggtctgcttg tacagggtgg
     1561 aaatgtcgat gcacgccggg ccgagcgtgc cttcgacgag cggcagctcg gcactgcgct
     1621 ggttcgactc atccaccagt ttgacgatct tgggaccgga cacgggaacc tcctgaaaaa
     1681 agtcgccgcc aagcggcgct gcggggcggc gccgattgac gatggataca cgcaccgtgc
     1741 cggggaaagc agcgatgcca ttggccggat tatcgcacat cgccccgcgc gcatgcgtgc
     1801 gcggatggtc gaacggcgcg cacgaaaaca cgcggggcaa gccttggctt gccccgcgtg
     1861 ccatgtcacc gccgtcaacg acggcgtgac ggaggattac ttgtgcgcgt agcgcttgcg
     1921 gaacttgtcc acccggccgc cgacgtccag cgtcttctgc ttgccggtgt agaacgggtg
     1981 cgaatggctg gagatatcca ccttgaccag cgggtactcg ttgccatcct cccacttgat
     2041 ggtgtccttg gtggcgatcg tcgaacgcgt caggaacgcg aaatcggacg acagatcctg
     2101 aaacaccacc gggtggtaat tcggatggat atcgggcttc atggcgggct cggtgcaacg
     2161 tgaaaagacg gcaagcttag ggagattcgt gcattgcgtc aaggcgcgtg gcggtcagcc
     2221 gccacggtgc tgggccgcgc ggatctgcgc gtccaccgcg gccagtgccg tcatgttcac
     2281 cacccggcgc acgctcgatg ccgtggtcag gatgtgcgcc gggcggtcca cgcccatcag
     2341 gatcggcccg atcgcgacgc cgtcggtcat cacccgcacc atgttgtaga cgatgttggc
     2401 gctgtccagg ttcggcatca cgaacaggtt ggcgcgaccg gtgagcgtgg tgttcgggaa
     2461 gatgcgccgg cgcagcgcct cgtcccacgc ggtgtcggcc tgcatctcgc catcgacgtc
     2521 gagcttgggc acgcgcgcct tgaggatctc gcgcacgcga tgcatcttcg ccgccggcgc
     2581 gttgtcgtgg ctgccgaagt tggagtgcga cagcagcgcc accttgggct cgatgccgaa
     2641 cagcttgagc cggtacgacg cctgcagcgt cgcctcggcg atctgctccg catccggatc
     2701 gagctgcacg tgggtgtcga ggaagaacca ggtgcccttg tcgttgatga cgcagctcat
     2761 cgccgcggtg ccgcgcacgc cgggatcaag cccgaacacg ctgcgcaggt agccgagctt
     2821 cttgtggtag cggccgacga ggccgcacag catggcgtcc gcctcgccgc gctcgaccat
     2881 catcgcggcg atcagcgtcg gacgcgaacg catcaggttc ttcgccgcgt ccggggtcac
     2941 gccgcggcgc tcggtgagcg cgtggtactg ccgccagtat tcattgaagc gcggatcgtc
     3001 gtggatgttg gtcagctcga aatcgacgcc cgccttgagc cgcaggccga ggcgctggat
     3061 gcgcatgtcg atcacgtccg
//
LOCUS       DASSVL010000108         2521 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_16384, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000108 DASSVL010000000
VERSION     DASSVL010000108.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2521)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2521)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2521
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_16384"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(265..1503)
                     /locus_tag="VFM52_01870"
     CDS             complement(265..1503)
                     /locus_tag="VFM52_01870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015446966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HET8763945.1"
                     /translation="MPIQIRPILTALRRHKAGPVLITLQIALTLAIVCNALFIIHARL
                     ANLSEVSGVDESSVFVIKNQWATEWPTPQVDAQVQADLLALRQLPAVRDATPANGYPL
                     QGGGWDNFVTMTPEQTEPTTDAAVYTGDGHSLDTLGLKLVAGRNFRPDEVMVMGTQQA
                     ITPSTVIVSKALADKLFPAGNALGKSFYAMGATPSTIVGIVDPLHRQGVSQWNQAYAG
                     QSLIWPIRADDSRGLYYIVRAKPGQLAAAMREAPEALYAQSRLRIIDPKDGLQDYATI
                     RHAVYDSDRGMAILMGIICAVLLAITAAGIVGLTSFWVGQRRRQIGVRRALGATRRDI
                     LAYFLTENFLISAAGVVLGTVLAIVFNLWTVTRFEMHRMSLAYVGIGVIVLLLLGQGA
                     VLAPALRASRVSPVEATRSA"
     gene            complement(1514..>2521)
                     /locus_tag="VFM52_01875"
     CDS             complement(1514..>2521)
                     /locus_tag="VFM52_01875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007507130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HET8763946.1"
                     /translation="MMSVLPGGDRELPLNASGYAVGSDFFAMFEVPFRYGGGWSLQDD
                     AARAPDVVISGKLNQQVFGGANSVGRTLDLGGHDYRVVGVTNRWNPRPRFYDLFSTDG
                     FADEPDIYLPFTRALDLHMYPSGRNSCRGRLDFTNWTAYTQSNCVWITPWVELDTPAE
                     VASYRGFLTHYAADQQHAGRFNWAPNVRLRDVAQWLDHERVVPPESRISLAVAVGFFL
                     ICLVNTIGLLLAKFMRRAGEIGVRRALGASRREIYAQYLTEAGTVGLAGGVLGLLLTA
                     VGVAGVGVLFPPQIAKLAQLDLSLVGLTLVVAIIATVLAAFYPAWRAAHVQPAWQLKS
                     S"
BASE COUNT          405 a          870 c          853 g          393 t
ORIGIN      
        1 tcactgcgac tcccgcgctt gggctccttc acttgagccc cttcgcttga gctccttcac
       61 ttgggctcct tcgctgcgcc cctaacgctt gagctccctc tcccccaaca gctccaccgt
      121 tgggggagag ggctggggtg agggggccgc agttcgccaa gcgcccccct caccctgccc
      181 tctcccccgg cgaagccaag ggagagggtt caatccacca caccgtgcgc gctgcctgaa
      241 acaccttttc cttgcttgcg ctcctcacgc actccgcgtc gcctccaccg gcgacacgcg
      301 cgaggcgcgc agtgccgggg ccagtaccgc gccctgcccc aggagcagca gcacgatcac
      361 gccgatgccg acgtaggcca gcgacatgcg gtgcatctcg aaacgggtca ccgtccacag
      421 gttgaagacg atcgccagca cggtgccgag caccacgccg gctgcgctga tcaaaaagtt
      481 ttcggtgagg aagtaggcga ggatgtcgcg ccgggtggcg cccaaggcac ggcgcacgcc
      541 gatctgccgg cggcgctggc cgacccagaa gctggtgagg ccgacgatgc cggcagcggt
      601 gatcgccagc agcaccgcgc agatgatgcc catcaggatc gccatgccgc ggtcgctgtc
      661 gtacaccgca tggcgaatgg tggcgtagtc ctggaggccg tccttcgggt cgatgatgcg
      721 caggcggctt tgcgcgtaca gcgcctcggg cgcctcgcgc atcgcggccg cgagctggcc
      781 gggcttggcg cgcacgatgt agtagagccc gcgcgaatcg tccgcccgta tcggccagat
      841 cagcgactgc ccggcatagg cctggttcca ctggctcaca ccctggcggt gcaatggatc
      901 gacgatgccg acgatggtgc tgggcgtggc gcccatcgcg tagaagctct tgcccagcgc
      961 gttgccggcg gggaacagct tgtcggccag cgccttgctc acgatcaccg tcgatggcgt
     1021 gatggcctgc tgggtaccca tcaccatcac ctcgtcgggc cggaaattgc gccccgcgac
     1081 gagcttcagg cccagcgtgt cgagggaatg cccgtcaccg gtgtagaccg ccgcgtccgt
     1141 ggtcggctcg gtttgctcgg gtgtcatggt gacgaagttg tcccagccgc caccctgcag
     1201 cggatagccg ttggccggcg tggcgtcgcg caccgcgggc agttgccgca gcgcaagcag
     1261 gtcggcctgc acctgtgcgt cgacctgcgg cgtcggccat tcggtcgccc actggttctt
     1321 gatgacgaag acgctggatt cgtcgacgcc gctgacctcg gacaggttgg ccagccgcgc
     1381 gtggatgatg aacagcgcgt tgcacacgat cgccagcgtc agcgcaatct gcagcgtgat
     1441 cagcacgggg cccgccttgt ggcgacgcaa cgcggtgagg atgggccgga tctggatagg
     1501 catggcgggc tcctcagctc gacttcaact gccaggccgg ctgcacgtgc gccgcacgcc
     1561 acgccgggta gaacgccgcc agcacggtgg cgatgatggc cacgaccagg gtgagcccta
     1621 ccagcgagag gtcgagctgc gccagcttcg cgatctgtgg cggaaacagc acgcccacgc
     1681 cggccacgcc cactgcggtg agcagcaggc cgagcacgcc accggccagg cccaccgtgc
     1741 ccgcctcggt caggtactgc gcatagatct ccctgcgcga ggcgcccagc gcgcggcgca
     1801 caccgatctc gccggcgcgg cgcatgaact tcgccagcag caggccaatg gtgttgacca
     1861 ggcaaatcag gaagaagccc accgccaccg ccagcgagat gcggctctcg ggcggcacca
     1921 cgcgctcgtg gtccagccac tgcgccacgt cacgcaggcg cacgttgggc gcccagttga
     1981 agcggccggc atgctgctgg tcggcggcgt aatgggtgag gaagccgcgg tagctcgcga
     2041 cctcggccgg ggtgtccagt tccacccacg gcgtgatcca cacgcaattg ctctgtgtgt
     2101 aggccgtcca gttggtgaag tcgagccggc cacggcagct gttgcggcca ctgggataca
     2161 tgtgcagatc cagtgcgcgg gtgaacggca ggtagatatc cggctcgtcg gcgaagccgt
     2221 cggtgctgaa caggtcgtag aagcgcgggc gcgggttcca gcggttggtg acgcccacca
     2281 cgcggtaatc gtggccgccg aggtcgagcg tgcggcccac gctgttcgcg ccgccgaaca
     2341 cctgctggtt gagcttgccg ctgatgacca cgtcgggggc gcgcgccgcg tcgtcctgca
     2401 agctccagcc gccgccgtag cggaacggca cctcgaacat ggcgaagaag tcgctgccga
     2461 cggcatagcc gctggcgttc aacggcagct cgcggtcgcc gcccggcagc accgacatca
     2521 t
//
LOCUS       DASSVL010000109         2268 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_369447, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000109 DASSVL010000000
VERSION     DASSVL010000109.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2268)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2268)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2268
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_369447"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..646
                     /locus_tag="VFM52_01880"
     CDS             <1..646
                     /locus_tag="VFM52_01880"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HET8763947.1"
                     /translation="DRVAPGAYRKVHDRQHEVVGHVDILVNNAWGRRPGSTGFAPVEG
                     AGDADVEHGFRIGAEAALWAMQAVFPGMRERGWGRVINLCSLNGVNAHPYSLAYNMAK
                     EALRTLTRTAAREWAPFGICCNAICPGAATEAYRQFAAAQPDNAAELLKLNPMGYMGD
                     PERDIGGVALFLASEDARYLTGNTLFADGGSHINGVPWNPAPGGSPRAGAASRR"
     gene            774..1499
                     /locus_tag="VFM52_01885"
     CDS             774..1499
                     /locus_tag="VFM52_01885"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HET8763948.1"
                     /translation="MRLEGKVAVVTGAGQGMGRAIARLFQAEGAKVVGFDVHLAAVQE
                     TLGAAGLALDVNIADSAQVNAAFEQVVAKWGGVDVLVNNAGIGSVDKFADIPDETWAR
                     VIGVDLTGAFYCARAAVRVMQAKGIKGAIINTSSVSAVSGDGPAHYCAAKAGLMGLTR
                     CMAKELAPQGIRVNTLVPGPTNTPMMQGIPDEWAKASIAGVPMGRMAEPEDIARGALF
                     LASSDAGFVTGQNLAVNGGSAFI"
     gene            1510..>2268
                     /locus_tag="VFM52_01890"
     CDS             1510..>2268
                     /locus_tag="VFM52_01890"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HET8763949.1"
                     /translation="MTDRLKGKLAFVTGGSQGIGAATAKRFAQEGATVVICGRHADKL
                     AKVVDEIAAAGGKAEGVVADVAVEAQIVGAIEGAAKKHGRLDILVNNAAAYTWGPLTG
                     MDTTTWHQNFTTSVDGTFWGTRTAMQLMQGKGGAIVNLASICGTLGTAMMSGYSAAKA
                     AILNFSRAAAVEGAGQGIRVNVVIPAIIETPATAGMLSDAATRKGTEAIIPMGRVGQA
                     EELANAILFLASDEASYITGAALPVDGGRAAVLVT"
BASE COUNT          362 a          762 c          828 g          316 t
ORIGIN      
        1 tgatcgcgtc gcgcccggcg cgtaccggaa agtccatgat cggcagcacg aggtcgtcgg
       61 ccacgtcgac atcctcgtca acaatgcctg gggccggcgc cccggctcca ccggcttcgc
      121 gccggtcgaa ggcgccggcg atgccgacgt cgagcacggt ttccgcatcg gcgccgaggc
      181 tgcgctgtgg gcgatgcagg cggtgtttcc cggcatgcgc gaacgcggct gggggcgcgt
      241 catcaacctg tgctcgctga acggcgtcaa cgcgcatccg tattcgcttg cctacaacat
      301 ggcgaaggaa gcgctgcgca cgttgacccg aaccgccgcg cgcgagtggg cgccgttcgg
      361 catctgctgc aacgcgatct gtccgggcgc ggcaaccgag gcctatcgcc agttcgccgc
      421 cgcgcagccg gacaacgccg ccgagctgct gaagctcaac ccgatgggct acatgggcga
      481 ccccgaacgc gacatcggcg gcgtcgccct gttcctcgcc agcgaggacg cgcgctacct
      541 caccggcaac accttgttcg ccgacggcgg cagccacatc aacggcgtgc cgtggaaccc
      601 ggcacccggc gggagcccgc gcgcgggcgc tgcctcgcgg cggtagggca ggcgtccacc
      661 aggggcggtt tcgcggtggt gctttagtcc catcggacga tggcgggtgg tgcggctccg
      721 cctagcctcg acgccacgct gatgcagcgc cgattccacg ctgggagacc acgatgagac
      781 ttgaaggcaa ggtggcagtc gtcactgggg cggggcaggg catggggcgc gcgattgcgc
      841 gcctgttcca ggccgagggt gcgaaggtcg tcggtttcga cgtgcatctc gccgccgtgc
      901 aggaaacgct cggtgccgcc ggcctcgcgc tcgacgtcaa catcgccgac agcgcgcagg
      961 tcaacgccgc gttcgagcag gtggtggcga agtggggcgg ggtggacgtg ctggtgaaca
     1021 acgccggcat cggctcggtg gacaagttcg ccgacattcc cgacgagacc tgggcgcgcg
     1081 tgattggcgt ggacctgacc ggcgcgttct actgcgcgcg cgccgcggtg cgcgtgatgc
     1141 aggccaaggg catcaagggc gcgatcatca atacctccag cgtgtcggcg gtgtccggcg
     1201 acggcccggc gcactactgc gcggccaagg ccgggctgat gggcctgacc cgctgcatgg
     1261 cgaaggagct ggcgccgcag ggcatccgcg tcaacacgct ggtgccgggg ccgaccaaca
     1321 ccccgatgat gcagggcatt cccgacgagt gggccaaggc gagcattgca ggcgtgccga
     1381 tggggcgcat ggccgagccg gaggacatcg cgcgcggcgc gctgttcctc gccagcagcg
     1441 atgccggttt cgtcaccggc cagaatctcg ccgtcaacgg cggcagcgca ttcatctgag
     1501 gacgccacga tgaccgatcg attgaaaggc aagctggcgt tcgtgaccgg cggcagccag
     1561 ggcatcggcg ccgcgaccgc caagcgtttt gcgcaagagg gcgccacggt ggtgatctgc
     1621 gggcgccatg cggacaagct cgccaaggtg gtggacgaaa ttgccgccgc cggcggcaag
     1681 gccgagggcg tggtggccga tgtcgcggtg gaggcgcaga tcgtcggcgc catcgaaggc
     1741 gcggcaaaga agcacggccg gctcgacatc ctggtcaaca acgcggcggc ctacacctgg
     1801 ggcccgctga ccggcatgga caccaccact tggcaccaga acttcaccac ctcggtggat
     1861 ggcacgttct ggggcacgcg caccgccatg cagctgatgc agggcaaggg cggcgcgatc
     1921 gtcaacctgg cctcgatctg cggcacgctg ggcacggcga tgatgtcggg ctactcggcg
     1981 gccaaggccg cgatcctcaa cttcagccgc gcggcggcgg tcgagggcgc gggccagggc
     2041 atccgcgtca acgtggtgat cccggcgatc atcgagaccc cggccaccgc cggcatgctg
     2101 agcgacgccg cgacccgcaa gggcaccgag gcgatcatcc cgatgggccg cgtgggccaa
     2161 gccgaggagc tggccaacgc gatcctgttc ctggccagcg acgaggcgtc gtacatcacc
     2221 ggcgcggcgc tgccggtgga tggcgggcgc gccgccgtgc tggtcacc
//
LOCUS       DASSVL010000110         5466 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1061497,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000110 DASSVL010000000
VERSION     DASSVL010000110.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 5466)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5466)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5466
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1061497"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..638
                     /locus_tag="VFM52_01895"
     CDS             <1..638
                     /locus_tag="VFM52_01895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007513758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8763950.1"
                     /translation="PGLPAGVELKRFQNLALRKWEGYPLAGTLGDLLREDAPETFEAA
                     RTAPDVLVVRGELADRADLDYLRDTLGVLAALLDVGGRAVLDPQIFSLFAAAAWRERY
                     LVADGAPPRSHVLITRTPEDDGVHSRIHTRGMRKFARPDIALHGVPPTELDRAGVLCE
                     KLVEMEAFGARFLAGQVLDVDGLGAPLTAEPGGSLDDPMFNNLHVAFRWPA"
     gene            complement(644..1426)
                     /locus_tag="VFM52_01900"
     CDS             complement(644..1426)
                     /locus_tag="VFM52_01900"
                     /inference="COORDINATES: protein motif:HMM:NF019843.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8763951.1"
                     /translation="MDHRGALFVFALATAIAGCPASAAAQANDNGVQVALLNNPRIIE
                     THPDLRYRRLAIRAYESGDKAAALDLLRKAASYADKPSQAMLAAMYWNGDGVTADRPR
                     GYAWMDLAADRGYRDLLVQRESCWNALDAAGRKQAVTVGREIYAKYNDKAGLARLDAA
                     LRQEAKRATGSRTSFGGNNLTVRMRGGTAGPGLTPALDNGPVEVGGTPMRGEDYYSPV
                     LWLAGEYAKLKDDVWEQARAETGTVEIGPLQKVPKAGAGHGK"
     gene            complement(1568..2395)
                     /gene="mutM"
                     /locus_tag="VFM52_01905"
     CDS             complement(1568..2395)
                     /gene="mutM"
                     /locus_tag="VFM52_01905"
                     /EC_number="3.2.2.23"
                     /EC_number="4.2.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012509626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003684 - damaged DNA binding [Evidence
                     IEA];
                     GO_function: GO:0003906 - DNA-(apurinic or apyrimidinic
                     site) endonuclease activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0008534 - oxidized purine nucleobase
                     lesion DNA N-glycosylase activity [Evidence IEA];
                     GO_function: GO:0016799 - hydrolase activity, hydrolyzing
                     N-glycosyl compounds [Evidence IEA];
                     GO_function: GO:0019104 - DNA N-glycosylase activity
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006284 - base-excision repair [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional DNA-formamidopyrimidine
                     glycosylase/DNA-(apurinic or apyrimidinic site) lyase"
                     /protein_id="HET8763952.1"
                     /translation="MPELPEVETTRRGLEPHLVGRRVTAVVLRRRDLRWPIPHEIETL
                     LPGQRIDAVERRAKYLLLHTAVGSALLHLGISGMLRILPPDTPIGPHDQVDIVLARGA
                     HEGPRVLRFTDPRRFGCLLWQPPGTTHELLAHLGPEPLTDAFDGDTLWRASRGHTAAV
                     KTFLMDNAVVVGVGNIYANESLFAAGIDPRRAAGRVSRERYARLAVEVKRILAHAIER
                     GGTTLRDFLRPDGAPGYFYRELMVYGRAGDPCKVCGTRIRHAVIGQRSTFWCPHCQR"
     gene            complement(2395..2868)
                     /locus_tag="VFM52_01910"
     CDS             complement(2395..2868)
                     /locus_tag="VFM52_01910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008212157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8763953.1"
                     /translation="MRSRLLLVAAVVALVVLAAWQWRHDAQRAPGALLMLAPGGITRV
                     TLALGTAPAQTWTHRDGHWWAADGTRADDRYVDGLVAAAGAPVLAWRPLADFDPARIG
                     LAPPQSTLTLDGHELRFGAMSATGPQCYVQVGHRVALVSLRYQPRPPAPRRVELH"
     gene            complement(2877..4229)
                     /locus_tag="VFM52_01915"
     CDS             complement(2877..4229)
                     /locus_tag="VFM52_01915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008212159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4350 domain-containing protein"
                     /protein_id="HET8763954.1"
                     /translation="MRWARRFDSWLFALLLLAGAGALGYLASRHAWMADWTANGRVSL
                     STQSRAILKRVDGPVEAVSYASPRGDLRANIAAFLARYTQAKPDFTLRFVDPQQDPAQ
                     MREIGIGVDGEVILHWHGRQQRLTELSERDVSNALERLVRGNDRILAFVTGDGERLPS
                     GGGKADLGMLMAPLAQSGLRAVPLSFAQVAAVPQGTDLVVLASPTVALPAGAVDALVD
                     YVRNGGNLLWLRDPANGDLGLAPLAKALDVQVLPGVLVDGTGAALGLHDPRVLVQAQY
                     PPNPVTLGLQLATRFPQVAALARTGGGDWTVTPLLRSSAQSWTEFHPIDNAHPSAIRF
                     DAAAGELRGPLDFGLTLARLSPSPDKREQRVVVIGDGDFLSNAYLGEGGNRELGERIV
                     NWLLGDDALVNLPHRGVPDRVLDIDQRTFNTVSLGFIAGLPILLLAIGGLIAWRRRRR
                     "
     gene            complement(4229..4984)
                     /locus_tag="VFM52_01920"
     CDS             complement(4229..4984)
                     /locus_tag="VFM52_01920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008212161.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HET8763955.1"
                     /translation="MNFIAMLRLELLRLRVRPFGWALLALGIGWLGWNFTLLVGNFLA
                     SQVHRAALPDSPGFVDLVAVPLLGMLAQLAFLVVPLLGMSTLAGERRNGTLSVLLASG
                     VPASRIVLGKYAALLAWLLVWLALTLAMPLSLAHATAPDWGKLAAATLGLFLMLASLA
                     AIAVAASAFTSHPALAAVVGLLVGLGLWALNLGAQSAGIDDGALNWIAMSTHVQNLLR
                     GLVSSADLAWFVLLIAVCLALATRRIATDRERG"
     gene            complement(4981..>5466)
                     /locus_tag="VFM52_01925"
     CDS             complement(4981..>5466)
                     /locus_tag="VFM52_01925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007081358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HET8763956.1"
                     /translation="APVWPELTVEEHLATHGRLHGLRGSALRAAGDAALAQTGLQALR
                     RRLASALSQGQRQRLCLACALIHRPALLILDEPANGLDPVHAAELQQTLRTLAKGGTA
                     IILSTHLLAEATDMCDRVAILHAGRLRHVGAVGAGDRAALERTFFEIAMHGANPAAHA
                     A"
BASE COUNT          788 a         1875 c         2029 g          774 t
ORIGIN      
        1 gccccggact gcctgccggg gtcgagctca agcgcttcca gaacctcgcc ttgcgcaagt
       61 gggagggcta tccgctggct ggcaccctgg gtgacctgtt gcgtgaggat gcgccggaaa
      121 ccttcgaggc cgcgcgcacg gcgccggacg tgctcgtcgt gcgtggcgag ctggccgacc
      181 gcgcggacct cgactacctg cgcgacacgc tcggcgtact cgctgctctg ttggatgtcg
      241 gtggccgcgc cgtgctcgac ccgcagatct tcagcctgtt cgccgccgcc gcgtggcgcg
      301 agcgttatct cgtggccgat ggcgccccgc cgcgcagcca tgtgctgatc acccgcacgc
      361 ccgaggatga tggcgtgcac tcacgcatcc acacccgtgg catgcgcaag ttcgcccgac
      421 cggacattgc gctgcatggc gtgccgccga ccgaactcga ccgtgccggc gtgctgtgcg
      481 agaagctggt ggaaatggaa gccttcggcg cgcgcttcct tgccggacag gtgctcgacg
      541 tcgatggcct cggtgctccg ctcaccgccg agcccggcgg cagtctcgac gatccgatgt
      601 tcaacaacct gcacgtggcg ttccgctggc cggcgtgagg cgctcacttg ccgtggccgg
      661 cgcctgcctt cggcaccttc tgcagcggcc cgatctcgac cgtgccggtt tccgcccgcg
      721 cctgctccca cacgtcgtcc ttcagcttgg cgtactcgcc ggccaaccac agcacgggtg
      781 agtagtaatc ctcgccgcgc atcggcgtgc cgccgacttc gaccgggccg ttgtccagcg
      841 ccggggtgag cccggggccc gcggtgccgc cgcgcatgcg caccgtgagg ttgttgccgc
      901 cgaagctggt gcggctgccg gtggcgcgct tggcttcctg ccgcagcgcc gcgtccaggc
      961 gcgcgaggcc cgccttgtcg ttgtacttgg cgtagatctc gcggccaacc gtgaccgcct
     1021 gcttgcgccc ggcggcatcg agcgcgttcc agcagctttc acgctgcacc agcaggtcgc
     1081 ggtagccgcg atccgccgcc aggtccatcc atgcatagcc gcgcgggcga tccgcagtca
     1141 ccccatcgcc gttccagtac atcgccgcca gcatcgcctg cgaaggcttg tccgcgtagc
     1201 ttgccgcctt gcgcagcagg tccagcgccg cggccttgtc gccgctttca taggcgcgga
     1261 tcgcgagcct gcgatagcgc aggtcgggat gggtctcgat gatgcgcggg ttgttgagca
     1321 gcgcgacctg cacgccattg tcgttggctt gcgccgcggc ggaagcgggg cagccggcga
     1381 tggcggtggc cagggcgaag acgaacaacg cgccgcggtg atccatggcg tgggcctcga
     1441 tgggggcggc gcggtcgtgc cgccggtacc ctcaccgtat catcttgcga cgacacgctt
     1501 gccgcgatgc cggagcggtt tcgtgcgggt gggtggaacg ccagcttggc acggcggccg
     1561 gcgggcatta ccgctggcag tgcgggcacc agaacgtcga gcgctgcccg atgacggcgt
     1621 ggcggatgcg ggtgccgcag accttgcacg ggtcgccggc gcggccgtag accatcagct
     1681 cgcgatagaa gtagccgggg gcgccgtcgg ggcgcaggaa gtcgcgcagg gtggtgccgc
     1741 cacgttcgat ggcgtgggcg aggatgcgtt tcacctcgac ggcgaggcgc gcgtagcgtt
     1801 cgcgcgagac gcgtccggcg gcacggcgcg ggtcgatgcc ggcggcgaac agcgattcgt
     1861 tggcgtagat gttgcccacg ccgacgacga cggcgttgtc catcaggaac gtcttcaccg
     1921 ctgcggtgtg gccgcgcgag gcgcgccaca gcgtgtcgcc gtcgaaggcg tcggtgagcg
     1981 gctccgggcc gaggtgggcg aggagttcgt gcgtggtgcc gggtggctgc cacaataggc
     2041 agccgaaacg ccgcggatcg gtgaagcgca gcacgcgcgg gccttcgtgc gcgccgcgcg
     2101 cgagaacgat gtccacttgg tcgtgcgggc cgatcggggt atccggcggc aggatgcgca
     2161 gcatgccgct gatgcccagg tgcagcagcg cgctgccgac ggcggtgtgc agcaggaggt
     2221 atttcgcgcg gcgctcgacg gcgtcgatgc gctggcccgg cagcagcgtt tcgatttcat
     2281 gcggaatcgg ccagcgcagg tcgcgtcggc gcagcacgac ggcggtgacg cggcggccga
     2341 cgagatgcgg ttcgagtccg cgccgcgtgg tttcgacttc cggcagctca ggcatcagtg
     2401 cagctcgacg cgcctgggcg cgggtgggcg tggctggtag cgcagggaca ccagcgcgac
     2461 gcgatggccc acctgcacgt agcactgcgg accggttgcg ctcatcgcgc cgaagcgcaa
     2521 ctcgtggccg tccagcgtga gcgtggattg cggtggcgcg aggccgatcc tggcgggatc
     2581 gaagtcggcg agcggacgcc atgcaaggac gggggcgccg gcggcagcga ccaggccgtc
     2641 cacgtagcga tcgtcggcgc gcgtgccgtc cgctgcccac cagtggccgt cgcgatgcgt
     2701 ccaggtttgg gcgggggccg tgcccagcgc cagcgtgacg cgggtgatgc cgccgggtgc
     2761 aagcatgagc aaggcgccgg gcgcgcgttg cgcgtcgtgc cgccattgcc atgcggcgag
     2821 gacgaccagt gccaccaccg ccgcaaccag caacaggcgc gaacgcacgg cgcgtttcat
     2881 cggcggcgac ggcgccaggc gatcaggcca ccgatcgcca gcagcagtat gggcagcccg
     2941 gcgatgaagc cgagcgacac cgtgttgaac gtgcgctggt cgatgtcgag cacgcgatcc
     3001 ggcacccccc gatggggcag gttgaccagc gcgtcatcgc ccagcagcca gttgacgatg
     3061 cgctcgccga gctcgcggtt gccgccttcg ccgaggtagg cgttggacag gaaatcgccg
     3121 tcgccgatca ccaccacgcg ctgctcgcgc ttgtccgggc tgggcgacag gcgggcgagc
     3181 gtgaggccga aatcgagcgg gccgcgcagc tcgccggccg cggcgtcaaa ccggatcgcg
     3241 gacggatgcg cgttgtcgat cgggtggaat tcggtccagc tttgcgcgct ggaacgcagc
     3301 agcggggtga ccgtccagtc gccgccgccg gtgcgcgcga gcgccgccac ctgcgggaag
     3361 cgcgtggcga gctgcaggcc gagcgtgacc gggttcggcg ggtactgcgc ctgcaccagc
     3421 acgcgcggat cgtgcaggcc gagcgccgcg ccggtgccgt ccaccagcac gccgggcagc
     3481 acctgcacgt cgagcgcctt cgccagcggc gcgaggccga ggtcgccgtt cgccgggtcg
     3541 cgcagccaca agaggttgcc gccgttgcgc acgtagtcga cgagcgcatc cacggcgccg
     3601 gccggcagcg ccacggtggg gctggcgagc accacgagat cggtgccctg cggcacggcg
     3661 gccacctgcg cgaagctcag tggcaccgcg cgcaagccgc tttgcgccag cggcgccatc
     3721 agcatgccga ggtcggcctt gccgccgccg gagggcaggc gttcgccgtc gccggtgacg
     3781 aaggcgagga tgcggtcgtt gccgcgcacg aggcgttcca gtgcgttgct gacgtcgcgc
     3841 tcggagagtt cggtgagccg ctgctggcgg ccgtgccagt gcaggatcac ctcgccgtcg
     3901 acgccaatgc cgatctcgcg catctgcgcc gggtcctgct gcgggtcgac aaagcgcagc
     3961 gtgaaatccg gcttggcctg cgtgtagcgc gcgagaaagg cggcgatgtt cgcgcgcagg
     4021 tcgccgcgcg gactggcgta gctgacggct tccaccgggc cgtcgacgcg tttgaggatg
     4081 gcgcggcttt gcgtcgacag gctgacccgg ccattggccg tccagtcggc catccaggcg
     4141 tggcggctgg cgagatagcc cagtgcgccg gcgccggcca ggagcagcag cgcgaacagc
     4201 caactgtcga agcgacgagc ccagcgcatc agccgcgctc ccggtcggtg gcgatgcgtc
     4261 gcgtggcaag tgcgagacac accgcgatca gcagcacgaa ccatgcgaga tcggcgctgg
     4321 acaccagccc gcgcaagagg ttctgcacat gcgtgctcat cgcgatccag ttgagggcgc
     4381 cgtcgtcgat gccggcgctt tgcgcgccga ggttgagcgc ccacaggccg agtccgacca
     4441 gcagcccgac caccgcggcc agcgccgggt ggctggtgaa cgccgaggcc gcgaccgcga
     4501 tcgcggccag gcttgcgagc atcaggaaca ggcccagtgt ggcggcggcc agcttgcccc
     4561 agtccggcgc ggtggcgtgc gccagcgaca gcggcatcgc cagcgtcagc gcgagccaca
     4621 ccagcagcca ggcgagcaat gccgcgtact taccgagcac gatgcgcgac gccggcacgc
     4681 cgctcgcgag cagcaccgac agcgtgccgt tgcggcgctc gccggccagc gtggacatgc
     4741 ccagcagcgg caccacgaga aacgcgagct gcgccagcat gcccaacagc ggcacggcga
     4801 cgaggtcgac gaagccgggg ctgtccggca gcgccgcgcg gtgcacctgg ctggcgagga
     4861 agttgcccac cagcagggtg aagttccagc ccagccagcc gatgccgagc gccagcagcg
     4921 cccagccgaa cgggcgcacg cgcaggcgca ggagttccag ccgcagcatc gcgatgaaat
     4981 tcatgcggcg tgcgccgccg ggttggcgcc atgcatggcg atctcgaaga acgtgcgctc
     5041 cagcgccgcg cgatcgccgg cacccaccgc gccgacatgg cgcaggcgac ccgcatgcag
     5101 gatggcgacg cggtcgcaca tgtcagtcgc ctcggccagc aggtgggtgg aaaggatgat
     5161 ggcggtgcca cctttcgcca gcgtgcgcag ggtttgctgc agctcggccg cgtgcaccgg
     5221 atcgaggccg ttggccggct cgtcgaggat cagcagcgcc ggccgatgga tcagcgcgca
     5281 cgccaggcac aggcgctggc gctgcccttg cgacaaggcg ctggcaaggc gccggcgcaa
     5341 cgcttgcagc ccggtttgcg ccagtgcggc atcgcccgcg gcgcgcaggg cgctgccgcg
     5401 caagccgtgc aggcgaccgt gggtggccag gtgctcctcc acggtgagtt ccggccatac
     5461 cggcgc
//
LOCUS       DASSVL010000111         5115 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_298863, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000111 DASSVL010000000
VERSION     DASSVL010000111.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 5115)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5115)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5115
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_298863"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..446)
                     /locus_tag="VFM52_01930"
     CDS             complement(<1..446)
                     /locus_tag="VFM52_01930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007513144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HET8763957.1"
                     /translation="MTWRLHFLGVGAAQAAGELGSSSAVIERDGEPMLMIDCGIDALD
                     RYLATYHALPRALYLTHTHMDHVAGLESLFFKLWFDAQQRGRTRLFVHAALVPWLQTR
                     VADYPGVLAEGGANFWEAFRLVPVTRGFWLDGLWFDVFATRHHVPGT"
     gene            complement(443..1168)
                     /locus_tag="VFM52_01935"
     CDS             complement(443..1168)
                     /locus_tag="VFM52_01935"
                     /EC_number="2.7.1.166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008213935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016773 - phosphotransferase activity,
                     alcohol group as acceptor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-D-manno-octulosonic acid kinase"
                     /protein_id="HET8763958.1"
                     /translation="MREQLSADANGAILFDADASSQVDARWFDANHWRARGALREQAG
                     GRGGVQVVATPAGACVLRHYRRGGLVARVLGDRYLWRGADATRCFAEWRLLGVIARLG
                     LPGPLPVAARYVRSGLYYRADLLTRQIPDAQTLAQCFAAGRLDGALAATVGGLVARFH
                     RAGIWHADLNAHNVLIAPRGAYLIDFDRGRQRAPDERWRHANLQRLRRSLVKLGAAAA
                     GEAGFGAVIWQPLMTAYEAGYRA"
     gene            1209..2255
                     /locus_tag="VFM52_01940"
     CDS             1209..2255
                     /locus_tag="VFM52_01940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008435674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 9 protein"
                     /protein_id="HET8763959.1"
                     /translation="MSAPASLCLLRTSAIGDVTHVVPLVHTLQAAWPDNRLTWIVGKL
                     ERKLVGDLPGVEFVTFDKGKGLAGMREVWQAFAGRRFDALLHMQVALRSNVLSLGIHA
                     DRRIGYDAGRAKDLHGLVVNERIPARRGEHVLEALGSFCEPLGLKQTAVRWDIPIPDE
                     AHAWAAQQLPGDEPTLVVSPGSSHALRNWRPERCAAVMDHVAARGWRVVLVGGPSLAE
                     RSLADAVLAACKRAPLDLTGKDTLKKLLALLARAQLLLTPDSGPMHMANAVGTKVLGL
                     HAASNPNRSGPYSDRRWCVDKYDEAARRFLGKPASALAWGTKIEKPGVMDLISVDDVI
                     ERFEAAAQTLQLPS"
     gene            complement(2296..2692)
                     /locus_tag="VFM52_01945"
                     /pseudo
     CDS             complement(2296..2692)
                     /locus_tag="VFM52_01945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008435675.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6165 family protein"
     gene            complement(2698..4599)
                     /locus_tag="VFM52_01950"
     CDS             complement(2698..4599)
                     /locus_tag="VFM52_01950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007805146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic amino acid lyase"
                     /protein_id="HET8763960.1"
                     /translation="MSETIVLDGGSLTRLQLVAVAREGAQVALDQAQLEHVRRAADFL
                     AAKVNCGEPTYGVTTGFGSNADKLLGAHRVRDELPGGNPHAPEGTLLEELQHNLITTH
                     AVCVGKPFAPDVVRAMLCIRINTLMRGHSGIRVETLEALVAMLNAGIVPVVPEKGSVG
                     ASGDLAPLSHLAIVLLGGGEAFWQGERMPGGEALQRAGLKPIHLSFKEGLALNNGTAQ
                     MLATGSLALHDLGELLDTADLAAAMTLEAFAGRSGALREEVHALRPHPGQVAVAAHMR
                     KLIADSTLVDIPYHLVPHFRPWTADAWSEPDDQALSFDIGWDWVPANQRHGRETFYQR
                     FLPFKGGKKHQPQDAYCLRCMPQVHGAVRDAWLQACRVYDIELNAVTDNPLVFPENAD
                     QPHIEDQVISAGHFHGMPLALVMSYVKAAIPVLASISERRLNKLVDPANNDGLPAFLT
                     GNEDGTDSGFMIVQYTAAALVNDLATRAHPASVYSIPTSANAEDHVSMGANEARHVLE
                     MIEDLGHVLALELYAAAQALDYRQKMLNAARRLAQRGGWRALAAKVNHAPREGQPHYE
                     QFVAEVQQLAEALASAGDFHAGADVRHAHEIIRQRIAFLHRDRALDGDVRAACQLVHD
                     GAFFPSHAA"
     gene            complement(4646..>5115)
                     /locus_tag="VFM52_01955"
     CDS             complement(4646..>5115)
                     /locus_tag="VFM52_01955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007081768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="His/Gly/Thr/Pro-type tRNA ligase C-terminal
                     domain-containing protein"
                     /protein_id="HET8763961.1"
                     /translation="NEHPQIGSVCSGGRYENLAGQYTKSHLPGVGISIGLTRLYWQLR
                     EAGLVGSARSTVDVLVTQMDVAKLPAYLALAGELRAAGIATEVVLEESKLGKQFKYAD
                     RAGIRFAVVVGDDELAKHVVTVKDLRRGDQFEVPRAELVKTLRVEIEQAAVMG"
BASE COUNT          825 a         1817 c         1673 g          800 t
ORIGIN      
        1 gtgcccggca catggtggcg ggtggcgaac acgtcgaacc acaggccatc cagccagaag
       61 ccgcgcgtca ccggcacgag gcgaaaggct tcccagaaat tcgcgccgcc ttcggcaagc
      121 acgccggggt aatccgccac gcgcgtctgc agccacggca ccagcgcggc atgcacgaac
      181 aagcgcgtgc gcccgcgctg ctgtgcgtcg aaccacagct tgaagaacag gctttccagc
      241 ccggcgacgt ggtccatgtg ggtgtgggtg aggtacagcg cacgcggcag cgcgtggtac
      301 gtcgccaggt agcgatcgag cgcatcgatg ccgcaatcga tcatcagcat cggctcgcca
      361 tcgcgctcga tcacggcgct ggatgagccc agctcccccg cggcctgcgc cgcacccacg
      421 ccgagaaaat gcagtcgcca ggtcatgcac ggtagcccgc ttcgtaggcc gtcatcagcg
      481 gctgccagat cactgcgccg aatccggctt cacccgcggc tgccgccccc agcttgacca
      541 gcgaccgccg caggcgctgc aggttggcgt gccgccaacg ctcatccggg gcccgctggc
      601 gaccgcgatc gaagtcgatc aggtacgcgc cgcgaggcgc gatcagcacg ttgtgcgcat
      661 tgaggtcggc gtgccagata ccggcacggt ggaaacgcgc gacgagtccg cccaccgtgg
      721 ccgccagcgc gccatccagc cgccccgctg cgaagcattg cgccagcgtc tgtgcatcgg
      781 ggatctgccg cgtcaggaga tccgcgcggt aatacaggcc gctgcgcacg tagcgcgccg
      841 ccaccggcag cggccccggc aaaccgagcc gcgcgatcac gccgagcagg cgccactcgg
      901 caaagcagcg cgtggcatcg gcaccgcgcc acaggtagcg atcaccgagc acacgcgcca
      961 ccaggccgcc gcgccgatag tggcgcagca cgcaggcacc ggccggcgtg gcgacgacct
     1021 gcacgccgcc acgtcccccg gcttgctcgc gcaacgcacc tcgcgcacgc cagtgattgg
     1081 cgtcgaacca gcgggcgtcg acttgtgacg aggcatccgc gtcgaacaaa atcgcgccat
     1141 tggcatccgc gctcagttgt tcgcgcatcg atgttgtcac cccattctgg tcatcgtcgc
     1201 gattctacat gtcagctccc gcctcgcttt gcctgctgcg cacctcggcc atcggcgacg
     1261 tcacccacgt cgtgccgctg gtgcatacgc tgcaagcggc atggccagac aaccgcctga
     1321 cctggatcgt cggcaagctg gagcgcaagc tggtcggcga cctgcccggc gtcgagttcg
     1381 tcaccttcga caagggcaag ggcctcgccg gcatgcgcga ggtgtggcag gcgtttgccg
     1441 ggcgccgctt cgacgcgctg ctgcacatgc aggtcgcact gcgctcgaac gtgctgagcc
     1501 tcggcatcca tgcggatcgg cgcatcggct acgacgccgg gcgcgcgaag gatctgcatg
     1561 gcctggtcgt caacgagcgc atccctgcgc gccgcggcga acatgtgctc gaagccctcg
     1621 gcagcttctg cgaaccgctg gggctcaagc aaaccgcggt gcgctgggac attcccatcc
     1681 cggacgaagc ccacgcctgg gccgcgcaac aactgcctgg cgacgaaccg acgctggtgg
     1741 tgagccccgg ttcgagtcac gcgctgcgca actggcggcc ggaacgctgc gccgcggtga
     1801 tggaccacgt cgccgcgcgc ggctggcgcg tggtgctggt cggcgggcca tcactggcag
     1861 aacgctcgct ggccgacgcc gtactggccg cctgcaagcg cgcgccgctg gacctcaccg
     1921 gcaaggacac cctgaaaaaa ctgctggccc tgctcgcccg tgcgcaactg ctgctcacac
     1981 cggattccgg cccgatgcac atggccaacg ccgtcggcac caaggtgctc ggcctgcacg
     2041 cggccagcaa cccgaaccgc tccggcccct actccgaccg ccgttggtgc gtggacaaat
     2101 acgacgaagc cgcgcgccgc tttctcggca agccagccag cgcgctcgcc tggggcacca
     2161 agatcgaaaa gccgggcgtg atggacctca tcagcgtgga cgacgtgatc gagcgcttcg
     2221 aagccgccgc ccaaaccctg cagctaccgt cgtaggaatc cacccgcgca accacgtgcg
     2281 caaaccgcgc cgccgtcaca ccgcccgata atcctggtag gacttctcct cgaccagcgg
     2341 cgagccgagc ttgaggttga tctcgcgctt gatcactgcg cgctcgtcgt tgcggtagta
     2401 caccgagcgg gccagctcga tgaagctggc gtcgaacacc tgcgcgcgct ccttcaggcg
     2461 aatgcggtcc tcgatgtccc acagcacctc gttcactgcc agcaggcgcg cgcgcgtcgg
     2521 caatgtcggt gtgcgaggcc ggatgtgcgg cccaggtcgc gttgagcagg tcgagctcgg
     2581 tcttgacgtt ggcgagcttg gcggggtcgc cgatgcgacg tgccttgatt tcgagaatgg
     2641 tgatcttgtc gatcagctcg ccataggaga tcggggtctg gatctggttc atcggaatca
     2701 cgccgcgtgg gaggggaaga aggcgccatc gtgcaccagc tggcacgccg cgcgcacgtc
     2761 gccatccagc gcgcggtcgc gatgcaggaa agcgatgcgc tggcggatga tttcgtgcgc
     2821 atggcgcacg tcggcaccgg cgtggaaatc gccggccgat gccagggctt cggcgagctg
     2881 ctgcacctcg gccacgaatt gttcgtaatg cggctggccc tcgcgcgggg cgtggttgac
     2941 cttggccgcc agcgcccgcc agccaccgcg ctgcgcgagc ctgcgcgcgg cgttgagcat
     3001 cttctggcgg taatcgagcg cctgcgcggc ggcatacagt tccagcgcca gcacgtggcc
     3061 gaggtcctcg atcatctcca gtacgtggcg ggcctcgttc gcgcccatcg acacgtgatc
     3121 ctcggcgttc gcgctggtcg ggatcgaata cacgctggcc gggtgcgcgc gcgtcgccag
     3181 gtcgttgacc agggccgctg ccgtgtactg cacgatcatg aagccggaat cggtgccatc
     3241 ctcgttaccg gtgagaaacg ccggcaggcc atcgttgttc gccgggtcga cgagcttgtt
     3301 caagcgccgc tccgagatcg acgccagcac cggaatcgcc gccttcacgt aactcatcac
     3361 cagtgccagc ggcatgccgt ggaaatggcc ggcggagatg acctggtcct cgatgtgcgg
     3421 ctggtccgcg ttttcgggga acaccagcgg gttgtcggtg accgcgttga gctcgatgtc
     3481 gtacacgcgg cacgcctgca gccaggcatc gcgcaccgcg ccgtgcacct gcggcatgca
     3541 gcgcaggcaa tacgcgtcct gcggctggtg cttcttgccg cccttgaacg gcaggaagcg
     3601 ctggtagaag gtttcgcgcc cgtggcgctg gttggccggc acccagtccc aaccgatgtc
     3661 gaagctgagc gcctggtcgt ccggctcgct ccacgcatcc gccgtccacg gcctgaagtg
     3721 cggcacgagg tgatacggga tgtcgaccag cgtcgaatcg gcgatcaact tgcgcatatg
     3781 cgcggccacc gcgacctgtc ccggatgcgg gcgcagcgcg tgcacctctt cgcgcagcgc
     3841 gccgctgcgc ccggcgaagg cttccagcgt catcgccgcc gcgaggtcgg cggtgtccag
     3901 caactcgccc aggtcgtgca gcgccagcga accggtcgcc agcatctgcg ccgtgccgtt
     3961 gttcagcgcc aggccttcct tgaacgaaag gtggatgggc ttgagcccgg cgcgctgcaa
     4021 cgcctcgccg cccggcatcc gctcgccctg ccagaacgcc tcgccgccgc cgagcagcac
     4081 gatggccaga tgcgagagcg gcgcgagatc gccactggcg ccgaccgagc ctttttccgg
     4141 caccaccggc acgatgccgg cgttgagcat cgcgaccagc gcttcgagcg tttcgacgcg
     4201 aatgccggag tgcccgcgca tcagcgtgtt gatacggatg cacagcatgg cgcgcaccac
     4261 gtcgggcgcg aacggcttgc ccacgcacac cgcatgggtg gtgatcaggt tgtgctgcag
     4321 ttcttccagc agcgtgcctt ccggcgcatg cgggttgcca ccgggcaact cgtcacgcac
     4381 gcggtgcgcg ccgagcagct tgtcggcatt gctgccaaag ccggtggtga cgccgtaggt
     4441 cggctcgccg cagttgacct tcgcagcgag gaaatccgcc gcgcgccgca catgttcgag
     4501 ctgcgcctgg tccagcgcga cctgcgcgcc ctcgcgtgcc accgccacca gctgcagccg
     4561 ggtcaggctg ccgccatcca gaacgatcgt ttcgctcaca actgccccca agtgaatccc
     4621 gtgcgtgcgg cgtctgcgcg ccgcatcagc ccatgactgc cgcctgctcg atttccaccc
     4681 gcagggtctt gaccagttcg gcacgcggca cttcgaactg gtcgccacgg cgaaggtcct
     4741 tcaccgtgac cacatgtttc gccaactcgt cgtcgcccac caccaccgcg aagcggatgc
     4801 cagcgcggtc ggcgtacttg aactgcttgc cgagcttgct ctcttccagc accacctcgg
     4861 tcgcgatgcc cgccgcgcgc aattcgccgg ccagcgcgag atacgccggc agcttcgcca
     4921 cgtccatctg ggtgaccagc acgtcgaccg tactgcgcgc gctgccgacc aggccggcct
     4981 cgcgcaactg ccagtacagc cgggtcaatc cgatcgagat gccgacgccg ggcaggtgcg
     5041 acttggtgta ctggccggcg aggttctcgt agcgcccgcc ggagcacacc gagccgatct
     5101 gcgggtgctc gttga
//
LOCUS       DASSVL010000112         3272 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1330185,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000112 DASSVL010000000
VERSION     DASSVL010000112.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3272)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3272)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3272
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1330185"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..298)
                     /locus_tag="VFM52_01960"
     CDS             complement(<1..298)
                     /locus_tag="VFM52_01960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017464047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="kinase"
                     /protein_id="HET8763962.1"
                     /translation="MTAPKPRAAAPNASLAGHLLDQYAGRIARSKRPYIIGVSGLQGS
                     GKSTLAHEMRTQAEARGWPTEVLSLDDFYYSRSEREMMAQEIHPLLRTRGVPGTH"
     gene            392..1021
                     /gene="pdxH"
                     /locus_tag="VFM52_01965"
     CDS             392..1021
                     /gene="pdxH"
                     /locus_tag="VFM52_01965"
                     /EC_number="1.4.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007810024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004733 - pyridoxamine phosphate oxidase
                     activity [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase"
                     /protein_id="HET8763963.1"
                     /translation="MPRARHDSRKSFRAMLNPEILQTFRQLLDEAKASGDAEPTAMNL
                     ASVDADGRVAARIVLLKGVDERGFRFHTNYDSDKGSQLVAHPQVALCFHWKRVRLGVQ
                     VRVEGAARKLQPEESDAYFATRPRGSQIGAWASLQSQTLPDRHAFEERIARYEREFDG
                     RDVPRPPHWGGFLIEPDTVEFWYGHEFRLHERVRWSRHGQTWTSRLLYP"
     gene            complement(1204..2868)
                     /locus_tag="VFM52_01970"
     CDS             complement(1204..2868)
                     /locus_tag="VFM52_01970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008434538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="APC family permease"
                     /protein_id="HET8763964.1"
                     /translation="MTQERAIRRDVGPFALMLTGLGSIIGSGWLFGAWRAAQIAGPGA
                     IWAWVIGAVVIMAIALTYAELGAMFPESGGMVRYGHYSHGSLVGFIAAWANWIAIVSV
                     ISVEAEASAQYMSSWKWDWAKDLYHQAPGGHGELSTLGLAIAAALVIVYFLLNFWSVK
                     LFARSNTAITLFKLVIPALTAVLLMMSGFHPENFSVGIHGEAHSTDFASVLTAVAIAG
                     IVFSFNGFQSPVNLAGEARNPGKSIPFAIVCSIALATVIYVLLQVSFIGAVPREMLAN
                     VGWHGINFSSPFADLAIILGLQWLATLLFIDAVISPSGTGMTYTATTARMLYGMERNG
                     TLPAILGRVHPKWGVPRPAMWVNLVVSFLFLFFFRGWGTLAAVISVATVISYLTGPVS
                     AMTLRRTAPNLKRPLRLAALPVLAAVGFVMSTELLYWAKWPLTGEIILLMVVALPVYL
                     YYQAKDHWHDFGRQLKGAWWMIAYLPAIAFLSWAGSTTFGGQGYLPYGWDLVAVGVVG
                     FGFYLWGVASGWRTPSVEAAELAAIADPDAPLVPPDELSAERLTGH"
     gene            complement(2988..>3272)
                     /locus_tag="VFM52_01975"
     CDS             complement(2988..>3272)
                     /locus_tag="VFM52_01975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8763965.1"
                     /translation="DAELHGFDAGFAFAATRDRSLLASLNQRKFELWMTLEHSDRSLP
                     EAAARDWDGLFKHPALGRNVRHNMEYHRPLDLLRQHLLPAAQILPFDRAS"
BASE COUNT          538 a         1111 c         1151 g          472 t
ORIGIN      
        1 cgtgggtgcc cggcacgccg cgtgtgcgca gcagcgggtg gatctcctgc gccatcattt
       61 cgcgctcgga gcgcgaatag tagaagtcgt ccagcgacag cacttcggtc ggccagccgc
      121 gcgcctcggc ctgcgtgcgc atctcgtgtg ccagcgtgct cttgccgctg ccctgcaggc
      181 cggagacgcc gatgatgtac ggccgcttcg aacgcgcgat acgcccggcg tattggtcca
      241 ggaggtgccc ggcaagcgag gcgttcggcg cagccgcgcg cggcttgggc gcggtcatcg
      301 gccgccgtcc gcttcgggcg gatgcagtcg gctgcggacg cgggccgggt ggcaggttgc
      361 gttaagattt gccggattca tccgcgccat gatgccgcgc gcgcgccacg attcaaggaa
      421 aagtttcaga gccatgctca atcccgagat tttgcagacg ttccgccagt tgctcgacga
      481 ggcgaaggct tccggcgacg ccgagcccac cgcgatgaac ctggcctcgg tcgacgccga
      541 cggccgggtc gccgcgcgca tcgtgctgct gaagggtgtg gacgagcgcg ggttccgttt
      601 ccacaccaac tacgacagcg acaagggcag ccagctcgtg gcccacccgc aggtggcgct
      661 gtgcttccac tggaagcgtg tgcggctggg ggtgcaggtg cgcgtcgaag gcgccgcgcg
      721 caagctgcag ccggaagagt ccgacgccta tttcgccacc cgtccgcgcg gcagccagat
      781 cggcgcgtgg gcctcgctgc agtcgcagac cctgccggac cggcatgcct tcgaggaacg
      841 catcgcgcgc tacgaacgcg agttcgacgg ccgcgacgtg ccgcgcccgc cgcactgggg
      901 cgggttcctg atcgagccgg acacggtgga gttctggtac ggccacgagt tccggctgca
      961 cgagcgcgtg cgctggagcc ggcacgggca gacctggacc agccgcctgc tgtacccctg
     1021 agcggcgccc ggggcccgaa tcatctgggc cgcaaagccc gccgggcggc gccgccttgc
     1081 gccgcttcct gccgcatggc gccagtgccc agcggcggtg aaccgccgca aaccggcctt
     1141 cacgcggcga gcttcccgcc ccggaggttc ctgccgcccg gactgccggg ttcgaccggg
     1201 cgatcaatgc ccggtcaggc gctcggccga cagctcgtcc ggcggcacca gcggcgcgtc
     1261 ggggtcggca atggccgcca gttcggcggc ttccaccgat ggcgtgcgcc agccggacgc
     1321 cacgccccac aggtagaacc cgaagccgac cacgcccacc gcgacgagat cccagccgta
     1381 gggcaggtag ccctgaccgc cgaacgtcgt gctgccggcc catgacagga aggcaatcgc
     1441 cggcaggtag gcgatcatcc accacgcgcc cttgagctgg cggccgaagt cgtgccagtg
     1501 gtcctttgcc tggtagtaga ggtagaccgg cagcgcgacg accatcagca aaatgatctc
     1561 gccggtcagt ggccacttcg cccagtacag cagctcggtg gacatcacga agccgaccgc
     1621 cgccagcact ggcagggcgg cgagccgcag cgggcgcttg aggttgggcg ccgtgcgccg
     1681 cagcgtcatc gcgctgaccg gaccggtgag gtaggagatg accgtcgcca ccgagatcac
     1741 cgccgccagc gtgccccagc cgcggaagaa gaacaggaac aggaacgaca ccaccaggtt
     1801 cacccacatc gccgggcgcg gcacgcccca tttcgggtgc acgcggccga ggatcgccgg
     1861 cagtgtgccg ttgcgctcca tgccgtagag catgcgcgcg gtggtggcgg tgtaggtcat
     1921 gccggtgccg ctggggctga tcaccgcgtc gatgaacagc agcgtggcca gccactgcag
     1981 gccgaggatg atcgccaggt cggcgaacgg cgacgagaag ttgatgccgt gccagcccac
     2041 gttggccagc atctcgcgcg gcaccgcgcc gatgaacgac acctgcagca gcacgtagat
     2101 caccgtggcc agcgcgatcg agcagacgat cgcgaacggg atgctcttgc cggggttgcg
     2161 cgcctcgccg gccaggttca ccgggctctg gaaaccgttg aagctgaaca cgatgccggc
     2221 gatcgccacc gcggtgagca ccgaggcgaa atcggtcgag tgcgcctcgc cgtggatgcc
     2281 gacgctgaag ttctccggat ggaagccgct catcatcagc agcaccgcgg tgagcgcggg
     2341 gatcaccagc ttgaacaggg tgatcgcggt gttcgagcgc gcgaacagct tcacgctcca
     2401 gaagttcagc aggaagtaca cgatcaccag cgccgcggcg atggccaggc cgagcgtgct
     2461 cagctcgccg tggccgccgg gggcctggtg gtagaggtcc ttcgcccagt cccatttcca
     2521 cgaggacatg tactgcgccg aggcttccgc ctccaccgag atcaccgaga cgatcgcgat
     2581 ccagttcgcc cacgccgcga tgaagcccac cagcgagccg tgcgagtagt ggccgtagcg
     2641 caccatgccg ccggattcgg ggaacatcgc gcccagctcg gcgtaggtca gcgcgatcgc
     2701 catgatcacc accgcgccga tcacccacgc ccagatcgcg ccggggccgg cgatctgcgc
     2761 cgcgcgccat gcgccgaaca accagcccga gccgatgatc gagcccaggc cggtaagcat
     2821 cagggcgaac gggccgacgt cgcggcggat cgcgcgttct tgggtcatgc ggggttccca
     2881 tatcgacgcg aagcgcgccg tgaaggggcc gatggttgca gaatcgggcg ctccgtgtca
     2941 cctgtcggcg gtcatggaga cctggtgggc actccttgcc ttgtcgctca ggacgcgcgg
     3001 tcgaagggaa gtatctgcgc ggccggcaac agatgctggc gcagcaggtc gagcggacgg
     3061 tggtattcca tgttgtggcg cacattgcgg cccagcgcgg ggtgcttgaa caggccatcc
     3121 cagtcgcgcg cggcggcttc gggcagggag cggtcgctgt gttccagcgt catccacagc
     3181 tcgaacttgc gctggttgag cgaggccagc aggctgcggt cgcgggtggc ggcgaaggcg
     3241 aagccggcgt cgaagccgtg cagctccgca tc
//
LOCUS       DASSVL010000113         2279 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_581493, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000113 DASSVL010000000
VERSION     DASSVL010000113.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2279)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2279)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2279
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_581493"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(2..1813)
                     /locus_tag="VFM52_01980"
     CDS             complement(2..1813)
                     /locus_tag="VFM52_01980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019463904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GspE/PulE family protein"
                     /protein_id="HET8763966.1"
                     /translation="MAASPQIASLLGRRGRLELDEVLAALVVDGYALAEDAKNVRMGA
                     RAGRSTVELHPLVVIANAKLINQREPGRPLSLETLAEWLAGHAGLPYLKIDPMKINAA
                     TVTQVVSLAYAKRHRILPIAATVGEVTFATSEPFDDAWAPDLAHMLRRDIKRVVASPI
                     DINRYQQEFYGVQRSIQLAQDAKTGSDSSSAILNFEQLVELGKSGEVGADDRHVVHIV
                     DWLLQYAFEQRASDIHLEPRRETGYIRFRIDGVMQKVFELPAPVMTAVTARIKILARM
                     DVAEKRRPQDGRIKTRSASGREVELRISNMPTAFGEKVVMRIFDPDLVVKDFAQLGFS
                     PSEAENWRNMVERPHGIVLVTGPTGSGKTTTLYSTLKHLATPELNVCTVEDPIEMVSP
                     EFNQMQVHAAIELDFAAGVRTLLRQDPDIIMIGEIRDLETAQMAVQASLTGHLVLSTL
                     HTNDAPSAVTRLLDLGVPHYLIQSTLSGVVAQRLVRTLCPHCKQATTQDPLAWNVLTR
                     GWAMPVPAQVYRAVGCLECRNTGFMGRTGIYEMMKLSPQLRGMISAQLDLSGFGQAAL
                     AEGMRPLRISAASQVARGLTTVQEVLTVIPPIEHGSA"
     gene            1913..>2279
                     /locus_tag="VFM52_01985"
     CDS             1913..>2279
                     /locus_tag="VFM52_01985"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007810226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004820 - glycine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006426 - glycyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit alpha"
                     /protein_id="HET8763967.1"
                     /translation="MSARTFQDVIQTLNRYWAAQGCVLLQPLDTEVGAGTFHPATFLR
                     ALGPEPWSAAYVQPSRRPTDGRYGENPNRLQHYYQYQVLLKPNPSNLQELYLGSLKAI
                     GLDPLLHDIRFVEDDWESPT"
BASE COUNT          367 a          766 c          755 g          391 t
ORIGIN      
        1 gtcaggctga accgtgctcg atgggcggta tcacggtgag cacttcctgc acggtggtaa
       61 ggccgcgggc gacctgcgaa gcggccgaga tgcgcagcgg gcgcatgccc tcggccaggg
      121 cagcctggcc gaaaccgctg aggtcgagct gggccgagat catgccgcgc agttgcggcg
      181 agagtttcat catctcgtag atgccggtgc ggcccatgaa gccggtgttg cggcattcca
      241 ggcagccgac cgcccggtac acctgcgccg gcaccggcat cgcccagccg cgggtcagca
      301 cgttccacgc cagcgggtcc tgggtggtgg cctgcttgca atgcgggcac agcgtgcgca
      361 cgagccgttg cgcgaccacg cccgacagcg tcgactggat caggtaatgc ggcacgccaa
      421 ggtcgagcag gcgcgtcacc gcgctgggcg cgtcgttggt gtgcagcgtg gacagcacca
      481 ggtgtccggt gagcgaggcc tgcaccgcca tctgcgcggt ttccaggtcg cggatctcgc
      541 cgatcatgat gatgtccggg tcctgccgca acagcgtgcg cacgccggcg gcgaaatcca
      601 gctcgatcgc cgcatgcacc tgcatctggt tgaactccgg cgagaccatc tcgatcgggt
      661 cctccacggt gcacacgttg agttctggcg tggccaggtg cttgagtgtg gaatacagcg
      721 tggtggtctt gcccgagccg gtggggccgg tgaccagcac gatgccgtgc gggcgctcga
      781 ccatgttgcg ccagttctcc gcctcgctcg gcgagaaacc cagctgggcg aaatccttca
      841 ccaccagatc cggatcgaag atgcgcatca ccaccttctc gccgaaggcg gtgggcatgt
      901 tcgagatgcg caactccacc tcacgcccgg aggcagagcg cgtcttgatg cggccgtcct
      961 gcggccggcg cttctcggcc acgtccatgc gggcgaggat cttgatgcgt gcggtcactg
     1021 cggtcatcac cggcgccggc aactcgaaca ctttctgcat gacgccgtcg atgcggaagc
     1081 ggatgtagcc ggtctcgcgt cgtggttcca gatggatgtc cgaggcgcgc tgctcgaagg
     1141 cgtactgcag cagccagtcg acgatgtgca ccacatggcg atcgtcggcg ccgacctcgc
     1201 cgctcttgcc cagctccacc aactgctcga agttgaggat cgccgaggag ctgtcgctgc
     1261 cggtcttggc gtcctgcgcc agctggatcg agcgctggac gccgtagaac tcctgctggt
     1321 agcggttgat gtcgatcggg ctggccacga cgcgcttgat gtcccgccgc agcatgtggg
     1381 ccaggtcggg cgcccaggcg tcgtcgaacg gctcgctggt ggcgaacgtc acctcgccca
     1441 cggtcgccgc gatcggcagg atgcggtgcc gtttcgcgta ggccaggctc accacctggg
     1501 tgaccgtggc tgcgttgatc ttcatcggat cgatcttgag gtacggcaag ccggcatggc
     1561 cggccagcca ctcggccagc gtctccaggc tcaacggccg accgggctcg cgctggttga
     1621 tcaacttggc gttggcgatc accaccagcg ggtgcagctc caccgtgctg cggccggcgc
     1681 gcgcgcccat gcgcacgttc ttcgcatcct cggcgagcgc gtaaccgtcg accaccagcg
     1741 cggccagcac ctcgtccagt tcgagtcggc cacgacggcc gagcagcgag gcaatttgtg
     1801 gcgatgcagc catccggcaa gtgtcctgtg cgaggctccg ccagccggaa attccagccg
     1861 caaagcgagc tgcggctata ctaacgcgct ttaacccagg tcacggaaag ccatgtccgc
     1921 gcgcaccttc caggatgtga tccagaccct caaccgctac tgggcggcgc agggttgcgt
     1981 actgctgcag ccgctggaca ccgaagtggg cgccggtacg ttccatccgg ccaccttcct
     2041 gcgtgcgctc ggcccggagc cctggtcggc cgcttatgtg cagccgtcgc gtcgccccac
     2101 cgacggccgc tacggcgaaa acccgaaccg cctgcagcac tactatcagt accaggtgct
     2161 cctgaagccg aacccgtcca acctgcagga gctctatctc ggctcgctga aggcgatcgg
     2221 tctcgatccg ctgctgcacg acatccgctt tgtggaagac gactgggaaa gcccgacgc
//
LOCUS       DASSVL010000114         2154 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1132449,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000114 DASSVL010000000
VERSION     DASSVL010000114.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2154)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2154)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2154
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1132449"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2154
                     /gene="purL"
                     /locus_tag="VFM52_01990"
                     /gene_synonym="purI"
     CDS             <1..>2154
                     /gene="purL"
                     /locus_tag="VFM52_01990"
                     /gene_synonym="purI"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007507246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004642 -
                     phosphoribosylformylglycinamidine synthase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase"
                     /protein_id="HET8763968.1"
                     /translation="EGELRQRLLAVLEAKDAAPEPATLWVVPRLGTISPWSSKATEIL
                     RGAGCALRRVEHGTAWQLSGLPEAGTPERAAVLALLHDPMTQSLLTALDAAQGLFLGG
                     ESGALVHVALGADAQAALAAANQRLGLALADDEIEYLTERYAELGRDPTDAELFMFAQ
                     ANSEHCRHKVFNATWTVDGEAQDQSLFAMIRNTHAHSPAHTLSAYKDNAAVIAGSEGA
                     RFFADADGVWRAHPEMIDYAIKVETHNHPTAIAPWPGAATGAGGEIRDEGATGRGGKP
                     KAGITGFSVSDLRIPGHPQPWETERPLPPRMASAFEIMRDGPLGAAAFNNEFGRPCLG
                     GYFRSYEHETGEAGLRRGYDKPIMLAGGIANLRRDHVQKRRVQPGQAVIVLGGPAMLI
                     GLGGGAASSVAAGQSSAELDFASVQRDNAEMERRCQQVIDACWARGDANPIVSIHDVG
                     AGGLSNAIPELLNDAGVGGEIDLDRVPCDDPALSPMQIWSNEAQERYVLGIAQDDLAQ
                     FEALCVRERCPYAVVGAATAERRLRVTRSVSAAGSAESREVVIDLPMDVLFGKPPRMH
                     RDAKRIKPRVDLVPDLTGIGMDEALLRVLRLPTVGSKSFLIHIGDRSVGGLCHRDPMV
                     GPWQVPVADCAVTLADFDGYAGEAMAMAERAPVALLSSADAARLTVGEAITNLAAAPI
                     ASLGEIRLSANWMAAVNHPGEDAALFDAVKAIGKEL"
BASE COUNT          311 a          770 c          786 g          287 t
ORIGIN      
        1 gagggcgagc tgcgccagcg cctgctggcc gtgctggagg ccaaggacgc cgcgccggag
       61 ccggccacgc tgtgggtagt gccgcggctg ggcacgatct cgccgtggtc gagcaaggcc
      121 accgaaatcc tgcgtggtgc cggctgcgcg ctgcgccggg tcgagcacgg cacggcgtgg
      181 cagctttccg gtctgccgga agccggcacg cccgagcgtg ccgcggtgct ggcgctgctg
      241 cacgatccga tgacgcagtc gctgctgacc gcgctggatg ccgcgcaggg cctgttcctg
      301 ggcggcgagt ccggcgcgct ggtgcacgtg gcgctgggcg ccgatgcgca ggccgcgctg
      361 gccgccgcga accagcggct ggggctggcg ctggccgacg acgagatcga gtacctcacc
      421 gagcgctacg ccgaactcgg ccgcgacccg accgacgccg agctgttcat gttcgcccag
      481 gcgaactccg agcactgccg gcacaaggtg ttcaacgcca cctggacggt ggatggcgag
      541 gcgcaggacc agtcgctgtt cgcgatgatc cgcaacaccc acgcgcattc gccggcgcac
      601 accctgtccg cgtacaagga caacgcggct gtgatcgccg ggtccgaggg cgcgcggttc
      661 ttcgccgacg ccgatggggt gtggcgcgcg cacccggaaa tgatcgacta cgcgatcaag
      721 gtggaaaccc acaaccatcc gactgcgatc gcgccctggc ccggcgcggc gaccggcgcc
      781 ggcggcgaga tccgcgacga gggcgcgacc ggccgcggcg gcaagccgaa ggccggcatc
      841 accgggttct cggtgtccga cctgcgcatc cccggccatc cgcagccgtg ggaaaccgag
      901 cgcccgctgc cgccgcgcat ggccagcgcg ttcgagatca tgcgcgacgg cccgctcggc
      961 gccgccgcgt tcaacaacga attcggccgt ccgtgcctgg gcggctattt ccgcagctac
     1021 gagcacgaga ccggcgaagc cggcctgcgc cgcggctacg acaagccgat catgctggcc
     1081 ggcggcatcg ccaacctgcg ccgcgaccac gtgcagaagc gccgcgtgca gcccggccag
     1141 gcggtgatcg tgctcggcgg tccggcgatg ctgatcggcc tcggcggcgg cgccgcgtct
     1201 tccgtggccg ccggccagtc cagcgccgag ctcgatttcg ccagcgtgca gcgcgacaac
     1261 gccgagatgg agcgccgctg ccagcaggtg atcgatgcct gctgggcgcg cggcgacgcc
     1321 aacccgatcg tcagcatcca cgacgtcggc gccggcggcc tgtcgaacgc gattcccgaa
     1381 ctgctgaacg acgccggtgt cggcggcgag atcgacctcg atcgcgtgcc gtgcgacgac
     1441 cccgcgctgt cgccgatgca gatctggagc aacgaggcgc aggagcgcta cgtgctcggc
     1501 atcgcgcagg acgacctggc gcagttcgag gccctgtgcg tgcgcgagcg ctgcccctat
     1561 gcggtggtcg gcgcggcgac ggcggaacgc cgcctgcgcg tcacccgcag cgtttccgct
     1621 gccggctccg ccgaatcccg cgaagtcgtg atcgacctgc ccatggacgt gctgttcggc
     1681 aagccgccgc gcatgcaccg cgacgccaag cggatcaagc cgcgcgtgga tctggtgccc
     1741 gacctgaccg gcatcggcat ggatgaggcg ctgctgcgcg tgctgcgcct gcccaccgtg
     1801 ggcagcaaga gcttcctcat ccacatcggc gaccgcagcg tgggcggcct gtgccaccgc
     1861 gatcccatgg tgggcccgtg gcaggtaccg gtggccgatt gcgcggtgac cctggccgat
     1921 ttcgacggct atgccggcga ggcgatggcg atggccgagc gcgcgccggt ggcgctgctt
     1981 tccagcgccg acgcggcgcg gctgacggtg ggcgaggcga tcaccaacct ggccgccgcg
     2041 ccgatcgcca gtctcggcga gatccgcctg tcggcgaact ggatggccgc ggtcaaccac
     2101 ccgggcgagg acgccgcgct gttcgacgca gtgaaggcga tcggcaagga gctg
//
LOCUS       DASSVL010000115         2229 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_539112, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000115 DASSVL010000000
VERSION     DASSVL010000115.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2229)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2229)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2229
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_539112"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..206
                     /locus_tag="VFM52_01995"
     CDS             <1..206
                     /locus_tag="VFM52_01995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015446553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8763969.1"
                     /translation="ACALHALLAPARVLLSRGANRAAVDELGRTAADVASQLGYIDIA
                     LELGTRHGSAIPSVRQTLRQRAE"
     gene            complement(207..1280)
                     /locus_tag="VFM52_02000"
     CDS             complement(207..1280)
                     /locus_tag="VFM52_02000"
                     /inference="COORDINATES: protein motif:HMM:NF013257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 9 protein"
                     /protein_id="HET8763970.1"
                     /translation="MPGASHPVVIRFGRLGDTVLLQPLLHRLRQRYGQPCDLLVAGAG
                     PAVLYAHQPDVAEVRAVLAPRRLLCLSGERWRAIGWLREHRTAPVYVCEPRPHALRRI
                     DHMLHWAGMPPGQCTHLVDLPLRPGEHWVDHLLRFADVTPPDFEGRCRALAPETEVAP
                     HWQADAAECADCADWLQARGLSGYPLVLLQPANKRTMRWNGVRAAADDDKAWPPQRWA
                     MLARQILQHLPSARVLLCGCPGEAGHLRTICALAANPAVVSVADELPLARLKGLLCRV
                     HSMVSVDTGPAHLAAALGCPLVVMFGGVSPAHWAPRAIPPGVVTVLGGSSPGGRVADL
                     SVEQVLAAWDALPRQSVERPAAA"
     gene            complement(1413..>2229)
                     /locus_tag="VFM52_02005"
     CDS             complement(1413..>2229)
                     /locus_tag="VFM52_02005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019463967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006813 - potassium ion transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="NAD-binding protein"
                     /protein_id="HET8763971.1"
                     /translation="LAGEQGLLSVRQHSLLVLAITVSMALTPLLVAGLAKLLGARKVR
                     KPARDFDTIVAHSPRVIIAGYGRMGQIVARILRAEGIPFVALDHSVEQMDLVRRFGGW
                     NDIFYGDPARPELLRAAQADKAEVFVLASDEPESSLHVARVVRRMYPHLKIVARARNR
                     QHVWRLMDLGVDEPIRETLYSSLKLTEQVLLALGLPAAFAAGQVERFRVHDEELLKAQ
                     YVVYDDEAKLVETTREAQAQLDRLFEADAATPVPGGHDGVPGTAGDDALTKVP"
BASE COUNT          338 a          851 c          753 g          287 t
ORIGIN      
        1 acgcctgcgc gctgcacgcg ctgctcgcgc cggcacgcgt gctgctgtcg cgcggcgcca
       61 atcgggctgc cgtcgacgag ctcggacgta ccgcagccga cgtcgccagc cagctcggct
      121 acatcgacat cgcgctggaa cttggcaccc gccacggcag cgcgatcccg agcgtgcgcc
      181 agaccctgcg ccagcgggcg gaatgatcac gctgcggccg gtcgctctac ggattgccgc
      241 ggcagcgcgt cccaggccgc gagcacctgc tccacgctga gatcggcgac tcgcccgccc
      301 ggcgacgaac cgccgagcac cgtcaccacg ccgggcggaa tcgcccgcgg cgcccagtgc
      361 gccggcgaca cgccgccgaa catcaccacc agcgggcagc caagggccgc ggcaagatgc
      421 gccgggccgg tatccaccga caccatgctg tggacacggc acagcagccc cttcagccgc
      481 gccagcggca actcgtcggc caccgacacc accgcggggt tcgccgccag cgcgcagatc
      541 gtgcgcagat gcccggcctc gcccggacag ccgcacaaca gcacccgcgc ggaaggcaga
      601 tgctgcaata tctggcgtgc cagcatcgcc cagcgttgcg gtggccaggc cttgtcgtcg
      661 tccgcggcgg cacgcacgcc gttccagcgc atcgtgcgtt tgttcgccgg ctgcagcagc
      721 accagcggat acccggacag gccgcgcgcc tgcagccaat ccgcacaatc ggcgcattcc
      781 gccgcgtctg cttgccagtg cggtgccacc tcggtttcgg gcgccagcgc ccggcaacgg
      841 ccttcgaaat ccggtggcgt gacgtcggca aaacgcagca ggtgatcgac ccaatgctcc
      901 cccggacgca gcggcagatc gaccagatgg gtgcactgcc ccggcggcat gccggcccag
      961 tgcaacatgt gatcgatgcg gcgcagcgca tgcggccggg gctcgcacac gtagaccggc
     1021 gccgtgcggt gctcgcgcag ccagccgatc gcgcgccagc gctcgccgct caggcacagc
     1081 agccgccgcg gcgccagcac cgcacgtacc tcggccacgt cgggctggtg cgcatacagc
     1141 accgccggcc cggctccggc cacgagcagg tcgcatggct gcccgtagcg ctgccgcagg
     1201 cgatgcagca gcggttgcag cagcacggtg tcgccgaggc ggccaaagcg gatgacgacg
     1261 ggatgggatg ctccgggcat ggcggtggaa aacggcggtc gccgtgcgcc gttgacggca
     1321 ggatcttgcg ccgtctcatc ccgtcggcgg atctccgcgc gccacccggt cggtgcgcga
     1381 gtggacccgc gacgccaccg gcagcgtgcc ggtcaaggca ccttggtcag cgcgtcgtcc
     1441 cccgccgtgc caggcacgcc gtcgtgcccg cccggcaccg gtgtggcggc atcggcctcg
     1501 aacaggcgat cgagctgcgc ctgcgcctcg cgcgtggttt ccaccagctt ggcctcgtcg
     1561 tcgtagacga cgtactgcgc cttgagcagc tcctcgtcat gcacgcggaa ccgctcgacc
     1621 tggccggccg cgaacgctgc cggcaggccc agcgccagca gcacctgctc ggtgagtttc
     1681 aagctggaat acagggtttc gcggatcggc tcgtcgacac ccaggtccat cagccgccac
     1741 acgtgctggc ggttgcgcgc gcgcgccacg atcttcaggt gcgggtacat gcgccgcacc
     1801 acgcgcgcca cgtgcaggct ggactcgggc tcgtcgctgg ccagcacgaa cacctcggcc
     1861 ttgtcggcct gcgccgcgcg cagcagttcg ggccgcgcag ggtcgccgta gaagatgtcg
     1921 ttccagccgc cgaagcggcg caccaggtcc atctgctcca ccgagtggtc cagcgccacg
     1981 aacgggatgc cctccgcgcg caggatgcgc gccacgatct ggcccatgcg gccgtagccg
     2041 gcgatgatca cgcgcggcga gtgcgccacg atggtgtcga agtcgcgcgc cggcttgcgc
     2101 accttgcgcg cacccagcag cttcgccagc cccgccacca gcagcggcgt cagcgccatc
     2161 gacacggtga tcgccagcac cagcaggctg tgctggcgca cgctgagcag gccctgctca
     2221 ccggcgagc
//
LOCUS       DASSVL010000116         2302 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_694732, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000116 DASSVL010000000
VERSION     DASSVL010000116.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2302)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2302)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2302
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_694732"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            2..328
                     /gene="secE"
                     /locus_tag="VFM52_02010"
     CDS             2..328
                     /gene="secE"
                     /locus_tag="VFM52_02010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007514528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecE"
                     /protein_id="HET8763972.1"
                     /translation="MVLAAGIFAYSWFGRDGSVPVSMRLLGVLAALVIAVAIAAFTGL
                     GRRVRNFLAESQFEMRKVVWPTRDETIKTTGVILLVVIVLSLLLGLIDLILKSVILDW
                     LLKLGG"
     gene            336..896
                     /gene="nusG"
                     /locus_tag="VFM52_02015"
     CDS             336..896
                     /gene="nusG"
                     /locus_tag="VFM52_02015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019464004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006353 - DNA-templated transcription
                     termination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusG"
                     /protein_id="HET8763973.1"
                     /translation="MSKRWYVVHAYSGFENQVKRSLEERIKRAAMEEKFGEVLVPTEE
                     VIEMRGGQKRRSDRKFFPGYVLVQIETNTEGKSPRIDDECWHLVKETPKVMGFIGGTA
                     DKPLPIKDSEADVILSRVREGVEKPRPKVLFEPGEMVRVTEGPFNDFNGVVEEVNYEK
                     SRLRVAVLIFGRSTPVELEFGQVEKA"
     gene            1099..1527
                     /gene="rplK"
                     /locus_tag="VFM52_02020"
     CDS             1099..1527
                     /gene="rplK"
                     /locus_tag="VFM52_02020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005993334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11"
                     /protein_id="HET8763974.1"
                     /translation="MAKKVVGYIKLQVKAGQANPSPPVGPALGQRGLNIMEFCKAFNA
                     ATQKLEPGLPIPVIITAYSDRSFTFITKTPPATILIKKATGVAKGSSKPNTDKVGKIT
                     RKQLEDVAKQKEPDLTAADLDAAVRTIAGSARSMGLVVEG"
     gene            1531..2232
                     /gene="rplA"
                     /locus_tag="VFM52_02025"
     CDS             1531..2232
                     /gene="rplA"
                     /locus_tag="VFM52_02025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010341341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L1"
                     /protein_id="HET8763975.1"
                     /translation="MAKITKRMKAAQAAVQPGKVYGLEDALNIVKNNAKAKFVESVDV
                     AVRLGIDAKKSDQGVRGSSLLPHGTGKTIKVAVFCPAGEKAEAAKAAGADAVGMDDLA
                     ERMQGGDLDFGRVIATPDAMRVVGKLGQLLGPRGLMPNPKVGTVSPNPAEAVKNAKGG
                     QVRYRTDKAGIIHCTIGKADFDADSLKNNLQALLLDLIKAKPATAKGQYLQKISISST
                     MGPGVTVDQASLALK"
BASE COUNT          428 a          714 c          791 g          369 t
ORIGIN      
        1 gctggtgctg gcagcgggca tctttgccta ttcctggttc ggtcgtgacg gcagcgtccc
       61 cgtgtcgatg cgcctgctgg gcgtgctcgc cgcgctggtg atcgccgtgg cgatcgccgc
      121 gttcaccggg ctggggcggc gggtcaggaa tttcctggcc gaatcgcagt tcgagatgcg
      181 caaggtggtc tggcccacgc gcgacgagac gatcaagacg accggcgtca tcctgctggt
      241 agtgatcgtc ctgtcgctgc tgctggggtt gatcgacctg atcctgaagt cggtcatcct
      301 cgactggctg ttgaagctgg gtggttgaga tgagcatgag caagcgctgg tacgtggtgc
      361 acgcctattc gggcttcgag aaccaggtga agcggtccct cgaggagcgc atcaagcgcg
      421 ccgcgatgga agagaagttc ggcgaggtgc tggtgccgac cgaggaagtg atcgagatgc
      481 gcggcggcca gaagcggcgc agcgatcgca agttctttcc gggctacgtg ctggtgcaga
      541 tcgagacgaa caccgagggc aagtcgcccc ggatcgacga cgagtgctgg catctggtga
      601 aggagacgcc gaaggtgatg ggcttcatcg gcggcaccgc cgacaagccg ctgccgatca
      661 aggacagcga ggccgacgtc atcctgagcc gcgtgcgcga gggcgtggaa aagccccggc
      721 ccaaggtgct gttcgagccg ggcgagatgg tgcgcgtcac cgagggcccg ttcaacgact
      781 tcaacggcgt ggtcgaggaa gtcaactacg agaagagccg cctgcgcgtg gcggtgctga
      841 tcttcggccg atccaccccg gtggagctgg agttcggcca ggtcgaaaag gcctgatcgt
      901 ccgggtgggt cgcggcggct tggcggcgag ggacttgccg caagcccgtt cactctttac
      961 actatgcggt tcccgctgga atttcgtgtt ccggcgggtt cgtctgtacg gttttcgcgg
     1021 gatggcgaag gccttccaca tcgacggacc gaactgggcg aggagccgca aggcgcttga
     1081 actcgcaagg aaaatcccat ggcaaagaaa gtcgtaggct acatcaagct gcaggtcaag
     1141 gccggtcagg ccaaccccag cccgccggtc ggtccggcgc tgggtcagcg cggcctgaac
     1201 atcatggagt tctgcaaggc gttcaacgcc gccacgcaga agctggagcc gggtctgccg
     1261 attccggtca tcatcacggc ctactccgac cgcagcttca ccttcatcac caagaccccg
     1321 ccggccacca tcctcatcaa gaaggccacc ggcgtcgcca agggctcgtc caagccgaat
     1381 accgacaagg tcggcaagat cacccgcaag cagctcgaag acgtcgccaa gcagaaggag
     1441 ccggatctga cggctgccga tctggacgcc gcggtgcgca ccattgccgg tagcgcgcgc
     1501 agcatgggcc tggtggtgga gggttaagac atggcaaaga tcaccaagcg tatgaaggcc
     1561 gcccaggccg ctgtgcagcc gggcaaggtc tacgggctgg aagacgccct gaacatcgtc
     1621 aagaacaacg ccaaggccaa gttcgtcgag tccgtcgacg tggccgtgcg cctcggcatc
     1681 gacgcgaaga agtcggacca gggcgtgcgt ggttcctcgc tgctgccgca tggcaccggc
     1741 aagaccatca aggtcgccgt gttctgcccg gcgggcgaga aggccgaggc cgccaaggcc
     1801 gccggcgccg atgcggtcgg catggacgac cttgccgagc gcatgcaggg cggtgacctc
     1861 gacttcggtc gcgtgatcgc caccccggac gcgatgcgcg tggtcggcaa gctcggccag
     1921 ctgctcggcc cgcgcggcct gatgccgaac cccaaggtcg gcaccgtgtc gccgaacccg
     1981 gctgaagcgg tcaagaacgc caagggcggc caggtgcgct accgcaccga caaggccggt
     2041 atcatccact gcacgatcgg caaggcggat ttcgacgccg actcgctgaa gaacaacctg
     2101 caggcgctgc tgctcgacct gatcaaggcg aagccggcca ccgccaaggg ccagtacctg
     2161 cagaagatct cgatcagctc gaccatgggc cccggcgtga ccgtcgacca ggcctcgctg
     2221 gcgctgaagt aattggttcg acgcgggcgg ttcgccgccc gcggcagttt tttgagggca
     2281 tcgccaaggt cgcccagcga cc
//
LOCUS       DASSVL010000117         2225 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1231469,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000117 DASSVL010000000
VERSION     DASSVL010000117.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2225)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2225)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2225
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1231469"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..785
                     /locus_tag="VFM52_02030"
     CDS             <1..785
                     /locus_tag="VFM52_02030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017461610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="PQQ-dependent sugar dehydrogenase"
                     /protein_id="HET8763976.1"
                     /translation="VLRDIEHRLDDPPKPELVTDKLPTETHHGWRFIAFGPDGKLYVP
                     IGAPCNVCDKGKAFAKLTRMNADGSELQDVAYGIRNTVGFDWRPGSHQLWFTDNGRDM
                     LGDDIPSDKLNRLSRVGENFGFPYCHEGDILDPEFGRGHSCRDYTPPVLKLGAHVAAL
                     GMRFYTGRMFPASYHDAILIAEHGSWNRSKKAGYRVMAVRLDGNKAASYTPLVTGFEQ
                     NEQAWGRPADVQPLPDGSVLVSDDLAGAVYRITYGQGTGNRK"
     gene            855..1475
                     /locus_tag="VFM52_02035"
     CDS             855..1475
                     /locus_tag="VFM52_02035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017357053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbhB/YbcL family Raf kinase inhibitor-like
                     protein"
                     /protein_id="HET8763977.1"
                     /translation="MQLRSNNFVEGQPIPATNAFGKPGKPVALADNRSPHLAWKDAPE
                     GTRSFVLTCIDGDVPSRGDDVNKADRQVPADLPRVEFAHWLLANIPVECGELAEGACS
                     DGITPRGKRAPFGPPGSVQGVNDYTGWFAGDAEMSGSYLGYDGPCPPWNDSIVHHYRF
                     CLRALDVPTLPLQAGFTLAQLRAAMHGHVLAEATLTGTYAIHPVVE"
     gene            1590..1745
                     /locus_tag="VFM52_02040"
     CDS             1590..1745
                     /locus_tag="VFM52_02040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007082429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1328 domain-containing protein"
                     /protein_id="HET8763978.1"
                     /translation="MLHYTLVFLIVAAIAAVLGFGGFAGAATELAKALFVVFLILSIV
                     AFLRRAK"
     gene            1768..2127
                     /locus_tag="VFM52_02045"
     CDS             1768..2127
                     /locus_tag="VFM52_02045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014401549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8763979.1"
                     /translation="MTQSPAPTNETSNAIDTGAARVKAATSSAVANAKDALEHAADHV
                     EAGLHAATDKVAAGAHRAGATLDEASERGRAAVEASRERADQWLEDVRTYVREKPVQS
                     VAIALGAGWLLARLLRR"
BASE COUNT          381 a          799 c          729 g          316 t
ORIGIN      
        1 atgtgctgcg cgacatcgag caccgtctcg acgacccgcc gaaacccgag ctggtcaccg
       61 acaagctgcc gaccgagacc caccacggct ggcgcttcat cgcgttcggc ccggacggca
      121 agctgtacgt gccgatcggc gcgccgtgca acgtgtgcga caagggcaag gcgttcgcca
      181 agctcacacg catgaacgcg gacggcagcg agctgcagga cgtggcctac ggcatccgca
      241 acaccgtcgg cttcgactgg cggcccggct cgcaccaact ctggttcacc gacaacggcc
      301 gcgacatgct gggtgacgac atccccagcg acaagctcaa ccggctgtcc cgcgtgggcg
      361 agaacttcgg ctttccgtat tgccacgagg gcgacatcct cgatcccgag ttcggcaggg
      421 gccactcgtg cagggactac acgccgccgg tgctgaagct cggcgcgcac gtcgccgcgc
      481 tgggcatgcg cttctacacc ggcaggatgt tcccggcgag ctaccacgac gcgatcctga
      541 tcgccgaaca cggctcgtgg aaccgctcga agaaggccgg ctaccgggtg atggccgtgc
      601 gcctcgatgg aaacaaagcc gccagctaca cgccgctggt caccggcttc gagcagaacg
      661 aacaagcctg gggccgcccc gccgacgtgc aacccctgcc cgatggcagc gtgctggtga
      721 gcgatgacct cgcgggcgcg gtgtatcgca tcacttacgg gcagggaacc gggaacagga
      781 aatagggaac acgggtgcac acgccgcgtt ccactcctcg ttcccatcct gacctcctgc
      841 tcctggagac aaccatgcaa ctacgcagca acaacttcgt cgagggtcag ccgattcccg
      901 ccaccaatgc cttcggcaaa ccgggcaaac cagtcgcgct ggcggacaac cgcagtccgc
      961 atctggcgtg gaaggatgcg cccgagggca cgcgttcatt cgtgctgacc tgcatcgacg
     1021 gcgacgtgcc gagccgcggc gacgacgtga acaaggccga tcgccaggtg ccggccgacc
     1081 tgccgcgggt ggaattcgcg cactggctgc tcgcgaacat tcccgtcgag tgcggcgagc
     1141 ttgccgaggg cgcgtgcagc gacggcatca ccccgcgcgg caagcgcgcg ccgttcggcc
     1201 cgccgggcag cgtgcagggc gtcaacgact acaccggctg gttcgccggc gacgccgaaa
     1261 tgagcggcag ctaccttggc tacgacggcc cgtgcccgcc gtggaacgac agcatcgtgc
     1321 accactaccg tttctgcctg cgcgcactgg acgtgccgac actgccgctg caggctggct
     1381 tcacgctggc ccagctgcgc gcggccatgc acggccatgt gctggccgag gcgaccttga
     1441 ccggcaccta cgcgatccac cccgtcgtcg agtgacccgc ctcgcgccct gccccaccgg
     1501 cacgccgcct tcacgtgcag atggcggggc gtcgcggatg atgggtgggc agccgcaagc
     1561 gacgcggcaa gaagtggtac gtccgggtca tgttgcatta cacgctggtg ttcttgattg
     1621 ttgccgcgat tgccgccgta ctgggttttg gtggatttgc cggtgcggca accgagctcg
     1681 ccaaggccct gttcgtggtg ttcctgatcc tgtccatcgt cgcgttcctg cgccgcgcga
     1741 aatgagctga cccccggagg agttcgcatg acccagtccc ccgcccccac gaatgaaaca
     1801 tcgaacgcga tcgacaccgg tgctgcccgc gtcaaggccg ccacctcgag cgcagtagcc
     1861 aatgccaagg acgcgctgga gcacgccgcc gatcacgtcg aagccggcct gcacgccgcc
     1921 accgacaagg tggccgccgg cgctcaccgc gccggcgcca cgctcgacga ggccagcgaa
     1981 cgcgggcgcg ccgccgtcga ggcgagccgc gaacgcgccg accaatggct cgaagacgtg
     2041 cgcacctacg tgcgcgagaa gccggtgcag tcggtagcca tcgccctcgg cgccggctgg
     2101 ctcctggcgc gcctgctgcg ccgttgagcc gcgcatgacg gccgacaccg gcaccgcccg
     2161 ggccgacgac gacccggcgg cggccgccgc ggtggatgac ctgctgcggg ttgcgcgggc
     2221 aaccc
//
LOCUS       DASSVL010000118         2150 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1231508,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000118 DASSVL010000000
VERSION     DASSVL010000118.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2150)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2150)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2150
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1231508"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1108)
                     /locus_tag="VFM52_02050"
     CDS             complement(<1..1108)
                     /locus_tag="VFM52_02050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019398047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0097367 - carbohydrate derivative binding
                     [Evidence IEA];
                     GO_process: GO:1901135 - carbohydrate derivative metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SIS domain-containing protein"
                     /protein_id="HET8763980.1"
                     /translation="MTTTMPAMPAHQIEYLGTPVAQLSASGALCTAREIEQQPRMLER
                     THDLVAGMHDRLRSFVAPLIDNAAARVILAGAGTSAYIGQCLAPVLDRQLAARVDAIP
                     TTDIVSAPDQYLDARHPLLLVSFGRSGNSPESLAAAKFAEARIPDVRHLIVTCNADGA
                     LGRIQVKRSLTLQLPEETHDAGFAMTSSFSCMLYATLAALSPAHALDARIRPVAEATA
                     AAIHATSPMLQTLASQRNERVVYLGSGLLQGLAREAALKLGELCNGAVATCFESPLGF
                     RHGPKTFVNDNTLVVVFVSNDPLTRNYDHDLIDELRRDNVAARVIEVTTRPRGGAADD
                     TIVIPGMARADDVDLVWPYVAAAQVFALQASLARG"
     gene            complement(1068..2150)
                     /locus_tag="VFM52_02055"
     CDS             complement(1068..2150)
                     /locus_tag="VFM52_02055"
                     /inference="COORDINATES: protein motif:HMM:NF019625.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II D-tagatose-bisphosphate aldolase,
                     non-catalytic subunit"
                     /protein_id="HET8763981.1"
                     /translation="MEFVHAIADQVGLPRSRIVFGGDHLGPNPWTGLAADAAMDKAEA
                     MVDAYVAAGFHKIHLDCSMACADDPVPLPEAEIVHRAVRLCLAAEAACERTGGIPPVY
                     VIGTEVPTPGGATEAIEGLAVTTPEAALATIAAHRQAFEEAGLASAWERVIASVVQPG
                     VEFDHHEVIDYRPEKACELSEAIESVPGLVFEAHSTDYQTRASLRALIRDHFAILKVG
                     PGLTFALREALWALDAIENEWIPAHRRAGLRTVTLERMREKPAQWRRYYRAEGHALQI
                     DMQYSLSDRIRYYWPDPVVESARERLFSNLGEQPPPMPLLSQYLPGALPLLRSGAARD
                     PKAWVVAHVMTVLDDYHDACHACTSN"
BASE COUNT          352 a          715 c          729 g          354 t
ORIGIN      
        1 ttccgcgcgc gagcgatgcc tgcaacgcaa aaacctgcgc agccgcgacg tagggccaga
       61 ccaggtccac gtcgtcggct cgtgccatgc cgggaatcac gatcgtgtcg tcggccgcgc
      121 cgccacgcgg cctcgtggtc acctcgatca cgcgcgccgc cacgttgtcg cggcgcagtt
      181 catcgatcag gtcgtggtcg tagttccgcg tgagaggatc gttggacacg aataccacca
      241 cgagcgtgtt gtcgttgacg aaagtcttgg gcccgtgccg gaacccgagt ggtgattcga
      301 agcaggtggc caccgcgcca ttgcacaact cccccagctt cagcgccgcc tcacgcgcca
      361 atccctgcaa caggccgctg cccagatata cgacccgctc attgcgttgg gaggcgagcg
      421 tttgcagcat cggcgacgtg gcatggatcg ccgctgcggt ggcctcggcc acgggccgga
      481 tgcgcgcgtc cagcgcgtgc gccggcgaca acgctgcgag cgtcgcgtag agcatgcagc
      541 tgaagctcga agtcatcgcg aatccggcgt cgtgggtttc ctcgggcagc tgcagggtca
      601 gcgacctctt cacttgaatg cggcccaagg caccgtcggc gttgcaggtc acgatcaggt
      661 gccggacgtc gggaatgcgt gcctcggcaa atttcgccgc ggcaaggctt tcggggctgt
      721 tgccggaacg cccgaacgag accagcagca gcgggtgccg cgcgtcgagg tactggtccg
      781 gcgcgctgac aatgtccgtc gtcgggatgg catccacgcg cgcggccagt tgcctgtcga
      841 ggaccggcgc caggcactgg ccgatgtagg cggaggtgcc cgcgccggcg aggatcaccc
      901 gagccgccgc attgtcgatc aggggcgcga cgaagctccg caaccgatca tgcatgccgg
      961 ccacgaggtc atgggtacgc tcgagcatcc gtggttgctg ctcgatttcg cgggcggtgc
     1021 acaacgctcc gctggcggag agctgcgcca ccggggtccc caggtattca atttgatgtg
     1081 caggcatggc aggcatcgtg gtagtcatcc aggacggtca tcacatgcgc cacgacccac
     1141 gccttcgggt cgcgcgcggc gccggaacgc agcagaggca gcgcacccgg gaggtattgg
     1201 ctgagcagtg gcatgggcgg tggctgttca ccaaggttcg agaacagtcg ctcccgcgca
     1261 gactcgacca ccggatccgg ccagtagtag cggatgcggt cgctcaggct gtactgcatg
     1321 tcgatctgca gcgcgtggcc ctcggcgcgg taatagcgac gccactgtgc gggcttctca
     1381 cgcatccgct ccagtgtcac ggtgcgcaga cccgctcggc gatgcgcggg aatccattcg
     1441 ttctcgattg cgtccagcgc ccacaacgcc tcgcgcaacg cgaaagtgag tcccgggccg
     1501 accttgagga tcgcaaaatg gtcgcgtatc agcgcccgca gcgacgcgcg ggtctggtaa
     1561 tcggtggagt gggcctcgaa tacgaggccc ggcacgcttt cgatcgcctc gctcagctcg
     1621 caggcttttt ccggccggta gtcgatcacc tcgtgatggt cgaattcaac gcccggctgc
     1681 accaccgagg cgatcacgcg ctcccaggcg gacgcgaggc ccgcctcctc gaatgcctgg
     1741 cggtgtgccg cgatggtcgc cagggccgct tccggcgtgg taacggcgag cccttcgatg
     1801 gcctcggtgg cgccaccagg cgtcggcact tcggtaccga tcacgtatac cggagggatg
     1861 ccgccggtgc gctcgcatgc cgcttcggcg gccaggcaca ggcgcaccgc tcgatgcacg
     1921 atctcggcct cgggcaacgg caccgggtca tcggcacacg ccatcgagca atcgaggtgg
     1981 atcttgtgga agccggcggc cacgtaggcg tcgaccatgg cctcggcctt gtccatggcc
     2041 gcatccgcgg cgaggccggt ccacgggttg ggacccaggt gatcgccgcc gaacacgatc
     2101 cgcgacctcg gcaagccgac ctggtcggcg atggcgtgca cgaattccac
//
LOCUS       DASSVL010000119         2726 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_312906, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000119 DASSVL010000000
VERSION     DASSVL010000119.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2726)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2726)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2726
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_312906"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>2726)
                     /locus_tag="VFM52_02060"
     CDS             complement(<1..>2726)
                     /locus_tag="VFM52_02060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007508781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004866 - endopeptidase inhibitor activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-2-macroglobulin family protein"
                     /protein_id="HET8763982.1"
                     /translation="DDVKPVAPLAVTLSGSVYESGGRAVTRLLKRTYWPADALVGVRP
                     LFDPKQGAESEAPAGFEIVRANIDGALVAGNHLKVRLQRELRDFYWLYERDGGWQSNA
                     NQRLQLIDEKDVDVAAGKSAHVEFPVQWGSYRVEVYDPATKLTTVFPFFAGYSWDDEN
                     LGKEARPDKVKLQLDKARYHAGDSMKVTVTPPQPGPGVLLVESDHLLYTKNIDAKAGA
                     TFEIPVTKEWERHDVYVTALVFRGGEAAEHTTPARAMGVEYVAMDRNDRRIPLKLDAP
                     ALMRPGNPLEVGVQASGLAGQQAFVTLSAVDQGVLNITDYPVPDAWAWLFAKRALSVD
                     AYDLYSRIIEAMDGAEAKLRYGGDMSGAALPKATRLNPKVQIVDLFAGPVAFDAQGRA
                     TLHVDVPDFNGSLRLAALAYTDSRYGNADGAVTVRAPLVVEPSTPRVMAAGDQAMISL
                     DLKNLSGKDGTAKVSVKGGGPITVDKAAQSVSLKDGAGTTLHMPVTAGAGAAVATVDI
                     HAELNDYSVDRHFEFAVRPAWPETVSTTPMALEAGKPEHLGAAAIAGLLPATVNARIT
                     LSTLPPLPYAAALRDMLRYPYGCIEQTTSKGYAALILDGATARALGAQVMSDAVRKGA
                     VDTALSRIASFQASNGHFSFWGGSSPIVTFTTPYVVDFMLDARDAGFAVPQEVLQKSL
                     QRLNDDLLAGGHPYYGYEHHDHLRLADEAYSGFVLARVNRAPLGTLRAIFDNERQKLV
                     APLPLVHLGIALKLMGDNERAQKAIDEAFAWSKERPWYVGDYGSELRDLALMVALTHT
                     YGMSQPAYDAKLVDWARNASANVRQRQKEFADYRWSWSYLSTQEQAAIARVAAAFDAK
                     SNAPLAATLTVNGKTESAPDQRVWSRALSVAELNAGVSVQPTSDAAIFATLDV"
BASE COUNT          362 a          960 c          937 g          467 t
ORIGIN      
        1 acgtcgagcg tggcgaagat cgccgcgtcg ctggtcggct gcacgctgac cccggcgttg
       61 agctcggcca cgctgagcgc gcggctccac acgcgctggt ccggggcaga ttcggtcttg
      121 ccgttcaccg tgagcgtggc ggccagcggc gcattgcttt tcgcatcgaa tgccgccgcc
      181 acgcgggcga tcgccgcctg ctcctgcgtg ctcaggtacg accacgacca gcggtagtcg
      241 gcgaattcct tctgccgctg gcgcacgttc gcgctggcgt tgcgcgccca gtcgaccagc
      301 ttggcgtcgt aggcgggctg gctcatgccg taggtatggg taagcgcgac catcagcgcc
      361 aggtcgcgca gttccgagcc gtagtcgccg acgtaccagg ggcgttcctt gctccaggcg
      421 aacgcctcgt cgatggcctt ctgcgcgcgc tcgttgtcgc ccatcagctt cagcgcgatg
      481 cccaggtgca ccagcggcag cggcgcgacc agcttctgcc gttcgttgtc gaagatcgcg
      541 cgcagcgtgc ccagcggcgc gcggttgacg cgcgccagca cgaagccgga gtacgcctcg
      601 tcggccaggc gcaaatggtc gtggtgctcg tagccgtaat acggatggcc gccggcgagc
      661 aggtcgtcgt tgagccgttg cagcgatttc tgcagcacct cctgcggcac cgcgaaaccg
      721 gcgtcgcgcg cgtccagcat gaagtcgacc acgtacggcg tggtgaaggt gacgatcgga
      781 ctgctgccgc cccagaagct gaagtggccg ttgctggcct ggaacgaggc gatccgcgac
      841 agcgccgtgt ccaccgcgcc cttgcgcacg gcgtcgctca tcacctgcgc gcccagcgcc
      901 ctggcggtgg cgccgtccag gatcagggcg gcgtagccct tgctggtggt ctgctcgatg
      961 cagccgtacg ggtagcgcag catgtcgcgc agcgcagccg cgtacggcag cggcggcaag
     1021 gtgctcaggg tgatccgcgc gttcaccgtg gccggcaaca ggccggcgat cgcggcggcg
     1081 ccgaggtgct cgggcttgcc ggcctccagc gccatgggcg tggtgcttac cgtttccggc
     1141 caggccgggc gcaccgcgaa ttcgaagtgg cggtccacgc tgtaatcgtt gagctcggcg
     1201 tggatgtcca ccgtcgccac cgcggcgccc gcgccggcgg tgaccggcat gtgcagggtg
     1261 gtgccggcgc cgtccttcag cgacacgctt tgcgcagcct tgtccaccgt gatcgggccg
     1321 ccgcccttga cgctcacttt cgcggtgccg tccttgccag acaggttctt cagatcgagg
     1381 ctgatcatcg cctggtcgcc ggccgccatc acccgtggcg tgctcggctc gaccaccagc
     1441 ggcgcacgca cggtgaccgc gccgtcggcg ttgccgtagc ggctgtcggt gtacgccagc
     1501 gcggccaggc gcaggctgcc gttgaagtcg ggtacgtcga cgtgcagcgt ggccctgccc
     1561 tgcgcgtcga acgccaccgg gccggcgaac aggtcgacga tctgtacctt cgggttgagc
     1621 cgggtggcct tcggcaacgc cgcaccgctc atgtcgccgc cgtagcgcag cttcgcctcg
     1681 gcgccgtcca tcgcctcgat gatgcggctg tacaggtcgt acgcatccac gctcagggca
     1741 cgcttggcga acagccacgc ccacgcgtcg ggcaccgggt agtcggtgat gttgagcacg
     1801 ccctggtcga ccgccgacag cgtgacgaag gcctgctgcc cggccagccc gctggcctgc
     1861 acgccgacct cgagcgggtt gcccgggcgc atcagcgcgg gcgcatcgag cttcagcgga
     1921 atgcgccggt cgttgcggtc catcgccacg tattccacgc ccatcgcgcg cgccggcgtg
     1981 gtgtgttcgg cggcctcgcc gccacggaac accagcgccg tcacgtagac gtcgtggcgc
     2041 tcccactcct tggtcaccgg gatctcgaag gtggcaccgg ctttcgcgtc gatgttcttc
     2101 gtgtagagca ggtggtccga ttccaccagc agcacgccgg ggccgggctg cggcggcgtc
     2161 accgtgacct tcatgctgtc gccggcgtgg tagcgcgcct tgtccagctg cagcttgacc
     2221 ttgtccggac gcgcctcctt gcccaggttc tcgtcgtccc agctgtagcc ggcgaagaac
     2281 gggaacaccg tggtgagttt ggtcgccggg tcatacacct ccacgcggta gctgccccat
     2341 tgcaccggga actcgacgtg ggccgacttg ccggcggcga cgtcgacgtc cttttcgtcg
     2401 atcagctgca ggcgctggtt cgcattcgac tgccagccgc catcgcgttc gtacagccag
     2461 tagaagtcgc gcagctcgcg ctgcaggcgc accttcaggt ggttgccggc gaccagtgcg
     2521 ccgtcgatgt tcgcccgcac gatctcgaag cccgccggcg cctcgctttc ggcgccctgc
     2581 ttcggatcga acagcgggcg cacgccgacc agcgcgtcgg ctggccaata ggtgcgcttg
     2641 agcagccggg tcaccgcgcg gccgccgctc tcgtacacgc tgccggacag ggtcaccgcc
     2701 agcggcgcga ccggcttgac gtcatc
//
LOCUS       DASSVL010000120         2384 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_666431, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000120 DASSVL010000000
VERSION     DASSVL010000120.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2384)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2384)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2384
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_666431"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..584)
                     /locus_tag="VFM52_02065"
     CDS             complement(<1..584)
                     /locus_tag="VFM52_02065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003484290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase domain-containing protein"
                     /protein_id="HET8763983.1"
                     /translation="MAKAKTAYVCNDCGAEYPKWQGSCTECGAWNTLSEIVLQAAVKS
                     AGAARGGYAGKAAGAPKVTPLTEVAVAAEPRTLTGIGELDRVLGGGLVQGSVVLVGGD
                     PGIGKSTLLLQMLGTLGVQLPSVYVTGEESLAQVAARAQRLGLPLEPLQALAETCIER
                     ILEQAAAAHPRVQVIDSIQTIWTELLTAAPGSVS"
     gene            complement(773..2164)
                     /locus_tag="VFM52_02070"
     CDS             complement(773..2164)
                     /locus_tag="VFM52_02070"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007080143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replicative DNA helicase"
                     /protein_id="HET8763984.1"
                     /translation="MSFVPERKPSSPVEALRVPPHSIDAEQAVLGGLMLAPDALDRVA
                     DRLAEDDFYRRDHRLIWRAINELANKGMPCDAVTLGDWFEANGLAEMIGGASYLIELA
                     NGTPSAANIAAYAEIVREKSVLRQLIDAGTAITEDGYRPEGKSVQEVMENAEQRVFHI
                     AETGARGKKDSVTMRDAVKDAFRLLTERYENRGQLTGITSGFTDLDNLTSGLQPSDLI
                     IVAARPSMGKTAFALNVAESAALRAKKAVAVFSMEMSASQLAFRLISSVGRIHQQSLR
                     NGDLAEEDWPRVSNAIAILSEAKIFIDDTPGLSPVELRSRARRLHREYGGLGLIVIDY
                     LQLMQVPGNKENRATEISEISRSLKGLAKELNVPVIALSQLNRSLEQRADKRPMMSDL
                     RESGAIEQDADVIMFIYRDEYYNKESADKGLAEIIVGKQRNGPTDTVKLTFLGQYTKF
                     ENYAPDSFVGGFE"
BASE COUNT          358 a          829 c          793 g          404 t
ORIGIN      
        1 tgcgacaccg agcccggcgc cgcggtgagc agctccgtcc agatggtctg gatcgagtcg
       61 atcacctgca cgcgcggatg cgccgccgcc gcctgttcga ggatgcgctc gatgcaggtt
      121 tcggccagcg cctgcagcgg ctccagcggc aggccgaggc gctgcgcgcg cgcggccacc
      181 tgggccagcg actcctcgcc ggtgacgtag acgctgggca gctgcacgcc gagtgtgccg
      241 agcatctgca gcagcagcgt ggatttgccg atgccgggat cgccgccgac cagcaccacc
      301 gaaccctgca cgaggccgcc gccgagcacg cgatccagtt cgccgatacc ggtcaacgtg
      361 cgcggctccg cggccaccgc cacctcggtc agcggcgtca ccttcggcgc gccggcggcc
      421 ttgccagcgt agccgccgcg cgccgcgccg gcggatttca ccgccgcctg cagcacgatt
      481 tccgatagtg tgttccacgc cccgcactcg gtgcacgagc cctgccactt cgggtactcc
      541 gccccgcagt cgttgcacac gtatgccgtc ttggccttgg ccatgcgtca gttgctcctg
      601 agtgccgttg ccacctgagc cgtgcccggc gggcgcggcg ctccacgaat gccgagcccg
      661 ctttggctcg ggcttcatcc cgacgatgga atgcctgccg gaatggatcc cgtcccatgc
      721 cttgatgcga ggtaccgatc gggccgaagc ccggcccgca tcggatgggc ccctactcga
      781 acccgccgac gaacgaatcg ggcgcgtagt tctcgaactt ggtgtactgg ccgaggaagg
      841 tgagcttgac ggtatcggtc gggccgttgc gctgcttgcc gacgatgatc tcggccagcc
      901 ccttgtccgc ggattccttg ttgtagtact cgtcgcggta gatgaacatg atcacgtcgg
      961 cgtcctgttc gatggcgccc gactcgcgca ggtcggacat catcggccgc ttgtcggcgc
     1021 gctgttcgag cgagcggttg agctgcgaga gcgcgatcac cggcacgttg agctccttcg
     1081 ccagcccctt cagcgaacgc gagatctcgg agatctcggt cgcgcggttc tccttgttgc
     1141 cgggcacctg catcagctgc aggtagtcga tcacgatcag ccccagcccg ccgtactcgc
     1201 ggtgcagccg gcgcgcgcgc gagcgcagct cgaccggcga caggccgggc gtgtcgtcga
     1261 tgaagatctt cgcctcggac aggatggcga tcgcattgga cacgcgcggc cagtcctcct
     1321 cggcgaggtc gccgttgcgc aggctttgct ggtggatgcg gccgaccgac gagatcaggc
     1381 ggaacgcgag ctgcgaggcg gacatctcca tcgagaacac cgccaccgcc ttcttcgcgc
     1441 gcagcgccgc gctctcggcg acgttcagcg cgaacgcggt cttgcccatc gacggacgcg
     1501 ccgcgacgat gatgaggtcg gacggctgca ggcccgaggt gaggttgtcg aggtcggtga
     1561 agccgctggt gatgccggtg agctggccgc ggttctcgta gcgctcggtg agcaggcgga
     1621 acgcgtcctt caccgcgtcg cgcatggtca ccgaatcctt cttgccgcgc gcgccggtct
     1681 cggcgatgtg gaacacgcgc tgctcggcgt tttccatcac ctcctgcacg ctcttgcctt
     1741 ccgggcggta gccgtcctcg gtgatcgcgg tgccggcatc gatcaattgc cgcagcacgg
     1801 atttctcgcg cacgatctcg gcatacgcgg caatgttggc ggcgctcggc gtgccgttcg
     1861 ccagctcgat caggtaactg gcaccgccga tcatctcggc caggccgttg gcctcgaacc
     1921 agtcgccgag cgtgaccgcg tcgcacggca tgcccttgtt cgccagctcg ttgatcgcgc
     1981 gccagatcag gcgatggtcg cgacggtaga aatcatcctc ggccagccgg tcggcgaccc
     2041 ggtccagcgc gtccggcgcc agcatcaggc cgcccagcac cgcctgctcg gcgtcgatcg
     2101 aatgtggcgg cacccgcaac gcctcgaccg gtgacgaagg cttgcgttcg ggaacaaagg
     2161 acatcgatat acctcggcga cacggttcga ccggcgcacg acgcgcgccg ggaatccatc
     2221 atgcgcgaca gcgtctcacc ggtcgagatg gaaacctgtg gagaagctgg ggaaagcttg
     2281 tgagtagccg gaaatcggga ggcggcgggc cggaaccagc accacaagtt cgcggcagcc
     2341 cgccttgccg ccccgattcc gattcgcgga ttccggcccc gcac
//
LOCUS       DASSVL010000121         2016 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1146798,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000121 DASSVL010000000
VERSION     DASSVL010000121.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2016)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2016)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2016
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1146798"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            248..1705
                     /locus_tag="VFM52_02075"
     CDS             248..1705
                     /locus_tag="VFM52_02075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008212981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-amylase family glycosyl hydrolase"
                     /protein_id="HET8763985.1"
                     /translation="MWYEIFVRSWYDTNGDGIGDLNGVTAKLDYLQSLGVSGIWLTPI
                     NPSPSYHGYDITDYRAVNPQFGTLADFRKLVAAAHARGIRVIVDLVANHTSDEHPWFK
                     AAQHPTDPHHDWYTWANRHTDLDTLSATGGKSWHAAPDGKQHYLGIFVAQMPDLNYDN
                     PAVRSAMIDVGKFWLEQGADGFRLDAAQHLYDNFASDNDNPQALAKNLAFWGEFRRGI
                     DGADPHTYLVGEVTRPLASALAPWFKPLDAVFNFPLAEQLITAAGSERNQSLAATLEH
                     TYAQYRAVTGGSAIQDAPFLSNHDQERVMSRLDGNAAHMRTAAAMLLTLPGEPYVYYG
                     EELGTLGRKPDPALREPMRWERSTTARGETRWEAVDPANGPAISVQAQEADPHSLLNL
                     YRTLIHWRSEVPALRDGGFAAYPHASDHLAAWQRPLPQGGVLVVHNLSGSTQTMALDV
                     PDEPRYTRVLKQTNPGASLVGTTLSVPAYTSVVLQ"
     gene            1702..>2016
                     /locus_tag="VFM52_02080"
     CDS             1702..>2016
                     /locus_tag="VFM52_02080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 31"
                     /protein_id="HET8763986.1"
                     /translation="MTTRYGSLALAALLLIGLPMTTLAAAPAAGPQRVAFHLGATQVT
                     VQAVGDGVLHVQALPAGASDAPTLVLDPSFKPAPSTAVRVQRDDHGATLTGARFDARW
                     NRQ"
BASE COUNT          330 a          770 c          630 g          286 t
ORIGIN      
        1 cggccgccgc tacgatctgg gcgtgtcgta caagttccag taaggcgctc gttgttcgat
       61 gctcccctca tgccccgtcg tgcggattcc ggcggggcat tctttttacg ccaaccggag
      121 ttgccatgcc ccgccgcctc gttccgaccc tgctcgccgc cctgctcgcg tccggcatcg
      181 ccgcacccgt ggggccgcga cgactgcgtc cgccacgccg tcgactgcca cggcagcgcc
      241 ttccggcgtg tggtacgaaa tcttcgtgcg cagctggtac gacaccaacg gcgacggcat
      301 cggtgacttg aacggcgtca ccgcaaaact cgattacctg cagagcctcg gcgtctccgg
      361 catctggctc acgccgatca acccgtcgcc gagctatcac ggctacgaca tcaccgacta
      421 ccgcgcggtg aacccgcagt tcggcacgct ggccgatttc cgcaagctgg tcgctgccgc
      481 ccacgcgcgc ggcatccgcg tcatcgtcga cctcgtcgcc aaccacacca gcgacgagca
      541 tccgtggttc aaggccgcgc agcatccaac cgacccgcac cacgactggt acacgtgggc
      601 gaatcgccac accgacctcg acaccttgag cgccaccggc ggcaagtcgt ggcacgcggc
      661 accggacggc aagcagcact acctcggcat cttcgtcgcg cagatgccgg acctgaacta
      721 cgacaacccg gccgtgcgca gcgcgatgat cgacgtcggc aagttctggc tggaacaggg
      781 cgccgacggt ttccgcctcg acgccgcgca gcacctgtac gacaacttcg cgtccgacaa
      841 cgacaacccg caggcgctgg caaagaacct cgcgttctgg ggcgagttcc gccgcggcat
      901 cgacggtgcc gatccgcata cctacctcgt cggcgaggtg acgcgcccgc tcgcctcggc
      961 gctcgcgccg tggttcaagc cgctggatgc ggtgttcaac ttcccgctcg cggagcagct
     1021 catcaccgcc gccggcagcg aacgcaacca gagcctcgcg gcgacgctcg aacacaccta
     1081 cgcgcagtac cgcgccgtca ccggcggcag cgcgatccag gacgcgccgt tcctctccaa
     1141 ccacgaccag gaacgggtga tgagccggct cgacggcaac gccgcgcaca tgcgcaccgc
     1201 cgccgcgatg ctgctcaccc tgcccggcga accgtatgtc tactacggcg aggaactggg
     1261 cacgctgggc aggaaacccg accccgcgct gcgcgagccg atgcgctggg agcgttcgac
     1321 cacggcaagg ggcgagacgc gctgggaggc ggtcgacccg gcgaacgggc cggcgatctc
     1381 ggtgcaggcg caagaagccg acccgcactc gctgctcaac ctctaccgca cgctgatcca
     1441 ctggcgcagc gaggtacccg cgctgcgcga tggcggcttt gccgcctacc cgcatgcgag
     1501 cgaccacctc gccgcgtggc agcgcccgct gccgcagggc ggcgtgctgg tggtgcacaa
     1561 cctctccggc agcacgcaga cgatggcgct ggacgtgccc gacgagccgc gctacacccg
     1621 cgtgctgaaa cagaccaatc ccggcgcaag cctcgtcggc acgacgctca gcgtgccggc
     1681 ctataccagt gtggtgctgc aatgacgaca cgctacggtt ccctcgccct cgccgcgctg
     1741 ctgctgatcg gcctgcccat gaccacgctc gccgctgcgc cggcggccgg gccgcaacgc
     1801 gtcgccttcc accttggcgc cacgcaggtg acggtgcagg ccgtcggcga cggcgtgctc
     1861 cacgtgcagg cgctgccggc cggcgccagc gacgcgccga cgctggtgct cgatccgtca
     1921 ttcaagccag caccttcaac ggcggtccgc gtgcagcgcg atgaccacgg cgcgacgctc
     1981 accggcgcgc gcttcgatgc acgctggaac cggcag
//
LOCUS       DASSVL010000122         2300 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_172275, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000122 DASSVL010000000
VERSION     DASSVL010000122.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2300)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2300)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2300
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_172275"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..535
                     /gene="lexA"
                     /locus_tag="VFM52_02085"
     CDS             <1..535
                     /gene="lexA"
                     /locus_tag="VFM52_02085"
                     /EC_number="3.4.21.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008574104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006282 - regulation of DNA repair
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="transcriptional repressor LexA"
                     /protein_id="HET8763987.1"
                     /translation="TLAEIAAAFGFNQPRAAYKHLQALQAKGCIELLPGRNRGIRLLN
                     PSARGRNAGLPLVGRVAAGAPILAVEHVERHVMVDPALFKPRADYLLRVKGDSMRDAG
                     ILDGDLAAVHRAREARTGQIVVARIEDEVTVKRLRILASSVRLEPANPDYAPIEVDPR
                     RTPFAIEGLYVGVIRAG"
     gene            537..1151
                     /gene="imuA"
                     /locus_tag="VFM52_02090"
     CDS             537..1151
                     /gene="imuA"
                     /locus_tag="VFM52_02090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003468832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009432 - SOS response [Evidence IEA];
                     GO_process: GO:0051782 - negative regulation of cell
                     division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translesion DNA synthesis-associated protein
                     ImuA"
                     /protein_id="HET8763988.1"
                     /translation="MSAILQPLIENGRLWRGQGTAPRRDALPSGFNALDGVLPGGGWP
                     HAALSEILFPADGVGEMRLLLPALATLGREGRPVVLVAPPYLPFPAAWIAAGVDLRFL
                     QIVQAGEHDAMWAAEQCLRSAACAAVLCWPRQADTATLRRLQLAAETGQTIGFLLRPS
                     AAAAQASMAAVRIGIETGPMRLRVLKCRGGNPPAQAVALASFAA"
     gene            1164..>2300
                     /locus_tag="VFM52_02095"
     CDS             1164..>2300
                     /locus_tag="VFM52_02095"
                     /inference="COORDINATES: protein motif:HMM:NF013015.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase Y family protein"
                     /protein_id="HET8763989.1"
                     /translation="MQWACISFPQLALDDVLRQRSDGAAPLVLFEGTGSRACICAANA
                     AAQHHGLHAGQSLTAARALYPRVHAVEHDPAAVERCHDFLAAWAYRYSSQVCRTFPQT
                     LLLEVRASFRLFGGWPALQAELRRELAALGFEHRIAAAPHPHAAMVLAGARDGCAIED
                     AAHLLDALGTLPVGRSGLDVSCVESLQRMGLRRLRQLFVLPRAELGKRIGTQALLHLD
                     RLRGAATQALDFYRPPDVFDQRVELPFNTASHESLLFPLRRLLRDFTAFLAGRDGGAQ
                     RFTLAFEHERGAPTEIRIGLLAPERDPELLFAITRARLERTRLREPVCGLRLVSDELP
                     AFTPARRDLFDTRPQQAVTWEVLRERLRARLGEPAVHGLALHPDH"
BASE COUNT          322 a          805 c          791 g          382 t
ORIGIN      
        1 gacgctggcc gaaatcgcgg cggcgttcgg cttcaaccag ccgcgcgcgg cgtacaaaca
       61 tctgcaagct ctgcaggcca agggctgcat cgaactgttg ccgggccgca accgcggcat
      121 ccggctgctg aatccttccg cgcgcgggcg caacgccggg ctgccgctgg tcggtcgcgt
      181 ggccgcgggc gcgccgatcc tggccgtcga acacgtcgaa cgccacgtca tggtcgatcc
      241 ggcgctgttc aagccgcgtg cggattacct gctgcgcgtc aagggcgatt cgatgcgcga
      301 tgccggcatc ctcgatggcg atctcgccgc cgtgcaccgc gcacgcgaag cgcgcaccgg
      361 ccagatcgtg gtggcgcgca tcgaggatga agtcacggtc aagcgcctgc gcatcctcgc
      421 ctccagtgtg cggctggaac ccgcgaatcc ggattacgcg ccgatcgaag tcgatccgcg
      481 gcgcacgccg ttcgcgatcg aaggcctgta cgtcggcgtg atccgcgcgg gctgacatga
      541 gcgccatcct gcagcccctc atcgagaacg gccgcctgtg gcgcggccaa ggcacggcgc
      601 cgcgccgcga tgcattgcca tccggcttca atgcgctgga tggcgtgctg cccggcggtg
      661 gctggccgca cgcggccttg agcgaaatcc tgtttcccgc cgatggcgtg ggcgaaatgc
      721 gactgctgct gccggcgctg gcgacgctcg gccgcgaagg acgcccggtc gtgctggtcg
      781 cgccgccgta cctgccgttt cccgccgcat ggatcgcggc cggcgtggat ttgcggttcc
      841 tgcagatcgt gcaggccggc gaacacgatg caatgtgggc ggccgaacaa tgcctgcgct
      901 cggccgcgtg cgcggcggtg ctgtgctggc cgcggcaggc cgataccgcg acgttgcggc
      961 gcctgcagct tgcggccgaa accgggcaga cgatcggttt cctgctgcgc ccttccgcgg
     1021 cggccgcgca ggcttcgatg gcggcggttc gcatcggcat cgaaaccggc ccgatgcggc
     1081 tgcgcgtcct gaaatgccgg ggcggcaatc cgccggcgca ggcggtcgcc cttgcgtcgt
     1141 ttgcggcttg atggaacgcc gtcatgcaat gggcctgcat ttccttcccg caactcgcac
     1201 tcgatgacgt gctgcgacag cgcagcgacg gtgcagcgcc gctggtgttg ttcgaaggca
     1261 ccggttcacg cgcgtgcata tgcgccgcca acgccgcggc ccaacaccac ggcctgcacg
     1321 ccgggcaatc gctgaccgcc gcgcgcgcgc tgtatccacg cgtgcacgcc gtcgaacacg
     1381 acccggccgc ggtcgagcgc tgccacgatt tcctggccgc gtgggcgtac cgctacagct
     1441 cgcaagtgtg ccgaacgttt ccgcaaaccc tgttgctgga agtgcgcgcg agtttccgcc
     1501 tgttcggcgg ctggcctgca ctgcaggcgg aactgcgccg cgaacttgcc gcgctcggtt
     1561 tcgagcaccg catcgccgcg gcgccccatc cgcacgcggc gatggtgctg gcgggcgcac
     1621 gcgatggttg cgcgatcgag gacgcggcgc acctgctgga tgcactgggc acgctgccgg
     1681 tcggacgcag cgggctcgac gtgtcttgcg tggaaagttt gcagcgaatg ggattgcgcc
     1741 ggctgcggca actattcgtg ttgccacgtg cggaactcgg caagcgcatc ggcacgcagg
     1801 cgctgttgca cctcgaccgc ctgcgtggtg cagccacgca ggcactcgat ttctaccggc
     1861 cgccggacgt gttcgaccag cgtgtcgaac tgccattcaa taccgcctcg cacgagtcgc
     1921 tgctgtttcc gctgcggcga ttgctgcgcg atttcacggc ctttctcgcc ggccgcgatg
     1981 gcggtgcgca gcgtttcacg ctggccttcg aacacgaacg cggcgcgccc accgagatcc
     2041 gcatcggcct gctggcgccg gaacgcgatc cggaactgct gttcgcgatc acgcgcgcac
     2101 ggctggagcg cacgcgcttg cgcgaaccgg tatgcggcct gcgcctggtc tccgacgaac
     2161 tgccggcatt cacgccggcc cggcgcgatc ttttcgatac gcgcccccaa caagccgtca
     2221 cgtgggaggt cttgcgcgag cgcctgcgtg cgcgactggg cgaaccggcc gtgcacggct
     2281 tggcgctgca ccccgatcat
//
LOCUS       DASSVL010000123         2452 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1146875,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000123 DASSVL010000000
VERSION     DASSVL010000123.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2452)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2452)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2452
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1146875"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..381
                     /locus_tag="VFM52_02100"
     CDS             <1..381
                     /locus_tag="VFM52_02100"
                     /inference="COORDINATES: protein motif:HMM:NF033788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HET8763990.1"
                     /translation="KNHFDMTLPRESAGERDLRRLRTFYKALGDETRLRIIGLLAEGG
                     PMPVHALSAGVGLSQPLISWHLRILRLAGLIDTRRQGRAVICNLRRAAFEELHEAEAR
                     LIGGTAGIGSAAPASSHGEVADVG"
     gene            371..1060
                     /locus_tag="VFM52_02105"
     CDS             371..1060
                     /locus_tag="VFM52_02105"
                     /EC_number="2.7.8.-"
                     /inference="COORDINATES: protein motif:HMM:NF013250.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0016780 - phosphotransferase activity, for
                     other substituted phosphate groups [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-alcohol phosphatidyltransferase family
                     protein"
                     /protein_id="HET8763991.1"
                     /translation="MSASQSRAHDLRRGDSLLSTRAKEAGRAILAPVVRLAMALHLTP
                     NAITVIGFVVVVAASVLVGTGSLLAGAVVLTAGSLLDAVDGALARATGLGSTFGSFLD
                     STLDRAAEAVLYGGIVAYYLNTGQPATLPVLLALVALAGSFMVSYTRARAEGIGLTAS
                     VGLAPRMERLVLIVAGIGVAGLGIGIGLIGAMAIVAILAVATTVQRIWHVHRLSSATP
                     AAAASESTWEK"
     gene            1138..2277
                     /locus_tag="VFM52_02110"
     CDS             1138..2277
                     /locus_tag="VFM52_02110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018287644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inositol-3-phosphate synthase"
                     /protein_id="HET8763992.1"
                     /translation="MGVGNCASSLVQGRYYYADAKETDFVPGLMHVNLGGYHVRDIEF
                     VAAFDVDREKVGKDLSQAIFAGQNNTFKFADVPNTGVTVDRGMTHDGLGKYLSQVIQK
                     APGPTADVVGILKERKVDVMVSYLPVGSEEATKWYVEQALQAGVAFVNAIPVFIGREP
                     YWQRRFAERGLPIIGDDIKSQVGATITHRVLTRLFMDRGVRIDRTYQLNFGGNTDFLN
                     MLERERLESKKISKTNAVTSMLDYEIGDDEVHVGPSDYVPWLKDRKWCHIRMEGTTYG
                     DVPLNMELKLEVWDSPNSAGVITDAIRCAKLGLDRGLAGTLVAPSSYFMKSPPIQIHD
                     DVAYNRVEAFIRGEDTETLDGSQAPEKRRLRKLAQHPTRQTADVG"
BASE COUNT          399 a          851 c          852 g          350 t
ORIGIN      
        1 aagaaccact tcgacatgac actgccccgc gagagcgccg gcgagcgtga cctgcgccgc
       61 ctgcgcacct tctacaaggc cctgggcgac gagacgcgcc tgcggatcat cggcctgctg
      121 gccgagggcg gacccatgcc ggtccatgcc ctctccgcgg gcgtcggcct gtcccagcca
      181 ctgatcagct ggcatctccg catcctgcgg ctggccggcc tgatcgacac caggcgccag
      241 ggacgcgccg tcatctgcaa cctgcggcgc gcggccttcg aggagctgca cgaggcagag
      301 gcacggctga tcggcggcac tgccggcatc ggcagcgccg cgccggcgag cagccacggg
      361 gaggttgcgg atgtcggcta gccagtcccg cgcccacgac ctgcgccgcg gcgactcgct
      421 gctctcgacg cgtgccaagg aggccgggcg cgccatcctg gcgccggtcg tgcggctggc
      481 gatggcgctg cacctgacgc cgaacgccat caccgtcatc ggtttcgtgg tcgtggtcgc
      541 cgcttccgtc ctggtcggca cgggaagcct gctggccggc gccgtggtgc tcaccgccgg
      601 ctcgctgctc gacgcggtcg acggggccct ggcccgcgca accgggctgg gcagcacctt
      661 cggcagcttc ctcgactcga ccctggaccg cgccgccgag gcggtgctct acggtggcat
      721 cgtggcctac tacctcaaca caggccagcc ggccaccctg cccgtgctgc tggcgctcgt
      781 cgcgctggcc ggctcgttca tggtcagcta tacgcgagcg cgggcggagg gcatcggcct
      841 gaccgcatcg gtgggcctgg cgccccgcat ggagcggctg gtgctcatcg tggccggcat
      901 cggggttgcg ggcctgggca tcggcatcgg tctcatcggc gccatggcga tcgtggcgat
      961 cctcgcggtg gccaccaccg tccagcgcat ctggcacgtc catcggctca gctcggcgac
     1021 cccggctgcg gcagcaagcg aatcgacatg ggagaagtga gcagcgtggc tgacacgaac
     1081 ggaaagagcg caaccaacgg ccggcattct gcggacggca agatccgggt cgcaatcgtg
     1141 ggcgtgggca actgcgcctc gagcctggtg cagggccgct actactacgc cgatgccaag
     1201 gagacggact tcgttcccgg gctgatgcac gtcaacctgg gcggctacca cgtgcgcgac
     1261 atcgagttcg tggcggcctt cgacgtcgac agggagaagg tcggcaagga cctgtcgcag
     1321 gcgatcttcg ccgggcagaa caacaccttc aagttcgccg acgtgccgaa caccggcgtc
     1381 actgtcgatc gcggcatgac ccacgacggg ctgggcaagt acctgagcca ggtcattcag
     1441 aaggccccgg gaccaacggc cgacgtggtt ggcatcctga aggagcgcaa ggtcgacgtc
     1501 atggtctcct acctgccggt gggcagcgag gaggcgacga agtggtacgt cgagcaggcg
     1561 ctgcaggccg gcgtggcctt cgtgaacgcc atcccggtgt tcattggccg tgagccgtac
     1621 tggcagcgcc gcttcgcgga gcgcgggctg ccgatcatcg gcgacgacat caagagccag
     1681 gtgggcgcga ccatcaccca ccgcgtgctg acgcgcctgt tcatggaccg cggcgtgcgc
     1741 atcgaccgca cctaccagct gaacttcggt ggcaacaccg acttcctgaa catgctggag
     1801 cgcgagcggc tggagtccaa gaagatcagc aagaccaacg cggtcacgtc catgctcgat
     1861 tacgagatcg gcgacgacga ggtgcacgtc gggcccagtg attacgtgcc ctggctcaag
     1921 gaccgcaagt ggtgccacat ccgcatggag ggcaccacct acggcgacgt gccgctgaac
     1981 atggagctca agctcgaggt ctgggactcg ccgaacagcg ccggcgtcat caccgacgcc
     2041 attcgctgcg cgaagctggg cctggaccgt ggtttggcgg gcaccctggt cgcgccctcg
     2101 agctacttca tgaagtcgcc gcccatccag atccacgacg acgtggccta caaccgggtg
     2161 gaggccttca tccgcggcga ggatacggaa acgctggacg gcagccaggc acccgagaag
     2221 cgcaggctcc gcaagctggc gcagcatccg accaggcaga cggcggacgt cggctgagcc
     2281 gatgccggca gagccgatgc cgaccgagcc gatgacggcc ggcggcccgg cggcggtgac
     2341 cagcgcacca cgcagcagct ccgccgccgc gggcgccgag cgcaggcgcg agcgcctcgc
     2401 cttctggggc tatcgcgccg ccgagggcgt catcagcgcg ctgccgcgcg gc
//
LOCUS       DASSVL010000124         2964 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_299128, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000124 DASSVL010000000
VERSION     DASSVL010000124.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2964)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2964)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2964
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_299128"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            602..871
                     /gene="fliQ"
                     /locus_tag="VFM52_02115"
     CDS             602..871
                     /gene="fliQ"
                     /locus_tag="VFM52_02115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007506969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009288 - bacterial-type flagellum
                     [Evidence IEA];
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis protein FliQ"
                     /protein_id="HET8763993.1"
                     /translation="MTPESVMEIGQHALYVAMLVAAPLLLTALAVGLLIGVIQAATQI
                     NEMTLSFIPKLIAMALVGLIAGPWMLRLLVHYTTQLIEGLPGVIR"
     gene            868..1638
                     /gene="fliR"
                     /locus_tag="VFM52_02120"
     CDS             868..1638
                     /gene="fliR"
                     /locus_tag="VFM52_02120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007506961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0006605 - protein targeting [Evidence IEA];
                     GO_process: GO:0044780 - bacterial-type flagellum assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthetic protein FliR"
                     /protein_id="HET8763994.1"
                     /translation="MTTLDVAWLVGWLGRFLWALARVGGLCLVVPVFGASVIPMRIRA
                     ALVVVLTAVLTPLAPATANALGLAGMLDAVTQIAAGAAVGFVLKLVFEAVAFGGGLVG
                     QSMGLGFAEVVDPQEGQNANVLGQFYLILVTLVFLALDGHLQLVALLADSFRHLPAGA
                     PGIDANGLHAVLVFVSQLFGGAVRVALPAMTALLVVNVGFAAISRAAPSMNLFAVGFP
                     ISVTLGFVALWFSLRALPGAFDALQTDAWALMRQLFGG"
     gene            1643..2779
                     /gene="flhB"
                     /locus_tag="VFM52_02125"
     CDS             1643..2779
                     /gene="flhB"
                     /locus_tag="VFM52_02125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017463598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis protein FlhB"
                     /protein_id="HET8763995.1"
                     /translation="MADDSDQEKTEQPTEKRLKESREKGELPRSRDLTGAAVVLAGVA
                     ALMAGGPHAFVHAQRIFRIGLGYSRDALFTDTLPARALAAALHEALALFAPVAIATLL
                     AALGAPLIIGGLNFSTKALEPKFERLDPIKGLGRIFAVRGLVELGKALLKVIFIGVLL
                     ALLLRHWQGEMLQTGRGPVLGGIALALGLLGQAGLWFGAILLLIGGIDAVYQKYDYNK
                     NLRMSRQEIKDEMKESEGSPEIKSRVRQVQQAQARRRMMQDVPRADVVVVNPTHFAVA
                     LRYDDGKSGAPRVLAKGADLVAQQIRAVAGEHRIPLVEAPPLARALYATTEVGREIPA
                     ALYVAVAQVLVYVYQLKQATVHGEAPPATPNPEVDPDLMGPYRM"
BASE COUNT          433 a          939 c         1100 g          492 t
ORIGIN      
        1 cgcgatgcca tcgccatcgc tattgatgtt gccgttgccg ttgccgttgc ttctggcgcg
       61 cctggagcgc gcccggcttg gtggggcccc tgggcgacgg tgaggcgggg acgatcaggc
      121 cgcgcagcgg gcgaggccag ggagggcctc gccttttcga ccgggcagga tgcccggccg
      181 aaaagcccgg ccacgcctca cggactttcc gtccacggat ggacggaaag cgccgccccg
      241 gggtgccgtt ttctcttggc tacttctctt ttgggcaagc aaaagagaag tagctcggcc
      301 gccgccaggc ggacgaaacc gctctgacgt ggtgcgagtc gcaaaagaaa cgcgcgccac
      361 gccagcggta cgaaaccgct ctgatgccgt gctaatcgca aaagaaacgc gcgtcgcgcc
      421 agcggcacga agccgctccg gtactgcgac cagcggcagc ggccacggcc catgcgaacg
      481 ccggacacag ccaccaaccc acgcctcggc acgcaacttg ctgccgaccc cctgtcggcg
      541 tgcgagcgcg ccaacttcat gacgggcgct gcgggcgccg acgcaaccgg agctggacac
      601 gatgacccct gaatccgtga tggaaatcgg ccagcatgcg ctgtatgtcg cgatgctggt
      661 cgccgcgccg ctgctgctca ccgcgctggc ggtcgggctc ctgatcggcg tgatccaggc
      721 ggcgacgcag atcaacgaga tgacgttgtc gttcatcccc aagctgatcg cgatggcgct
      781 ggtcgggctg atcgccgggc cgtggatgct gcgcctgctg gtgcactaca cgacgcagct
      841 gatcgagggg ctgcccgggg tgatccggtg accacactgg acgtggcctg gctggtgggt
      901 tggctgggcc ggttcctgtg ggcgctggcg cgggtcggcg ggctgtgcct ggtggtgccg
      961 gtgttcggcg cgtcggtgat cccgatgcgc atccgcgcgg cgctggtggt ggtgctcacc
     1021 gcggtgctga cgccgctggc gccggccacg gcgaatgcgc tcggcctcgc cgggatgctg
     1081 gacgcggtga cccagattgc cgcgggtgcg gcggtgggct tcgtgctgaa gctggtgttc
     1141 gaggcggtgg cgttcggcgg cgggctggtg gggcagagca tggggcttgg gtttgccgag
     1201 gtggtggacc cgcaggaggg ccagaacgcg aacgtgctcg ggcagttcta cctgatcctg
     1261 gtgaccctgg tgttcctcgc gctggatggc cacctgcagc tcgtcgcgct gctggcggac
     1321 agcttccgcc acctgccggc cggggcgccg gggatcgacg cgaacggcct gcatgcggtg
     1381 ctggtgttcg tcagccaatt gttcggcggt gcggtgcgcg tggcgttgcc ggcgatgacc
     1441 gcgctgctgg tggtcaacgt cgggtttgcg gcgatcagcc gcgcggcgcc gtcgatgaac
     1501 ctgtttgcgg tgggcttccc gatcagcgtc acgctcggtt tcgtcgcgct gtggttttcg
     1561 ctgcgcgcgc tgccgggggc gttcgacgcg ctgcagaccg acgcgtgggc gctgatgcgc
     1621 caattgttcg gaggctagcg ccatggccga cgacagcgac caggaaaaaa ccgaacagcc
     1681 aaccgaaaaa cggctcaagg aatcgcgcga gaaaggcgag ctgccgcgct cgcgcgacct
     1741 gaccggcgcg gcggtggtgc tggccggcgt cgcggcgctg atggccggcg ggccgcatgc
     1801 gttcgtgcat gcgcagcgga tcttccgcat cgggctcggc tattcgcgcg acgccttgtt
     1861 caccgacacg ctgccggcac gcgcgctcgc ggcggcactg cacgaggcgc tcgcgctgtt
     1921 cgccccggtc gccatcgcga cgctgctcgc tgcgctcggc gcgccgctga tcatcggcgg
     1981 gctcaatttc agcaccaagg cgctggagcc gaagttcgag cggctcgacc cgatcaaggg
     2041 gctggggcgc atctttgcgg tacgcgggct ggtggaactc ggcaaggcgc tgctcaaggt
     2101 gatcttcatc ggcgtgctgc tggcgctgct gctgcggcat tggcagggcg agatgctgca
     2161 gaccgggcgc ggcccggtgc tgggcggcat cgcgctggcg ctggggctgc tcgggcaggc
     2221 cgggctgtgg tttggcgcga tcctgctgct gatcggcggc atcgacgcgg tgtaccagaa
     2281 gtacgactac aacaagaacc tgcgcatgag ccggcaggag atcaaggacg agatgaagga
     2341 gagcgagggc agcccggaga tcaagagccg cgtgcgccag gtgcagcagg cgcaggcacg
     2401 gcgccggatg atgcaggacg tgcccagggc cgacgtggtg gtggtcaacc cgacccactt
     2461 tgcggtggcg ctgcgctacg acgacggcaa gagcggcgcg ccgcgcgtgc tggccaaggg
     2521 cgccgacctg gtggcgcagc agattcgcgc cgtggccggc gaacatcgca ttccgctggt
     2581 cgaggcgccg ccgttggcac gcgccttgta tgcaaccacc gaggtaggcc gggaaatccc
     2641 cgccgcgctg tacgtcgccg tggcccaggt actcgtgtac gtgtaccagc tgaaacaggc
     2701 cacggtgcac ggcgaggccc cgcccgccac gccgaacccc gaggtcgatc cggatctgat
     2761 ggggccctat cgcatgtaag gcagagtcaa aaccatgacg ggtgcgcagg tactgggcca
     2821 attcaagcag ctgacgcggc ggggccttgg cgcgccggtg gcgatgctgg tgatgctggc
     2881 aatgatgatg ttgccgctgc cgccgttcct gctcgacatg ctgttcagct tcaacatcgc
     2941 gctgtcgctg gtgatcctgc tggc
//
LOCUS       DASSVL010000125         5837 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_610002, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000125 DASSVL010000000
VERSION     DASSVL010000125.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 5837)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5837)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5837
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_610002"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..939
                     /gene="dapE"
                     /locus_tag="VFM52_02130"
     CDS             <1..939
                     /gene="dapE"
                     /locus_tag="VFM52_02130"
                     /EC_number="3.5.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008433395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009014 - succinyl-diaminopimelate
                     desuccinylase activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinyl-diaminopimelate desuccinylase"
                     /protein_id="HET8763996.1"
                     /translation="TDVVPTGPLDQWTSDPFVPTHRDGKLYGRGAADMKGAVAAMAVA
                     LERFVAAHPGHPGRVALLLTSDEEGPANLDGVRKMAEHFRATNERIDWCVVGEPSAIE
                     RLGDRVRVGRRGSLSAVLTVHGVQGHVAYPEKALNPIHAFAPALAELAAERWDAGNAD
                     FPPTSFQVSNLNAGTGANNVIPGELTALINFRYCTASRAEDLRARTEAILARHGVKFT
                     LDWNLSGAPFLTPPGGRLREAVVGACRELCGVEPEQSTGGGTSDGRFIAPLGAEVVEV
                     GPVNASIHKVDECVDVAELERLPDLYQAICARMLAG"
     gene            999..2375
                     /locus_tag="VFM52_02135"
     CDS             999..2375
                     /locus_tag="VFM52_02135"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019398082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HET8763997.1"
                     /translation="MRIEFHGAAGGEVTGSCHLVEAAGKRILFDCGMVQGGREAEARN
                     AEPFGFDPATIDALVLSHAHIDHIGRVPLLVKRGFTGAIWAQAATCELLPIMLLDAAS
                     LAERDAERGNRERKAGVPEVRALYTAADVAAAQRLLRPLAYDAATPILPGVTLCLHEA
                     GHIMGSAMLELRADGRTLLFTGDVGMRGTPILRDPAPPPRADLILMESTYGDRDHKDR
                     AATVAELGQILAAARADGGNVVIPAFGVGRSQELLYWFAEHFADWNLAPWTIFLDSPM
                     AAKVMAVYDGHEELFDAEAVKVWAGRVKPFRLPNLRVSESVDDSKAINRIHGGAIIIA
                     GSGMANGGRVRHHLANNLAFARNHVIFVGYQAAGTLGRLLVNGVPRVRLFGEEVPVRA
                     RIHTVGGLSAHADQRGLLDWYGASPNHPPVALAHGENPAREALAALLRQRFGVEVTLS
                     QPRLRLEV"
     gene            complement(2396..3715)
                     /locus_tag="VFM52_02140"
     CDS             complement(2396..3715)
                     /locus_tag="VFM52_02140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019466058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HET8763998.1"
                     /translation="MKSILLFVAVALCGHAAFAAEPAPTRIAITAAHLVAPEQGKVID
                     HPLVLVEGSRITEVRTGAAVPDGYRHIDLGGATLLPGLIDAHTHIDYEPEPVSGNYYQ
                     DVLQRNAIDLAVTAHVAARHTLEADFTTIRNLGSHDYIDVALRNAIDRGAIVGPRILA
                     ATLPLGATGGHMDYYTGFSPYIEFHGPSGVADGVDGLRAKVRENVKRGADVIKFAASA
                     GVMSAEESVGSAQYSQAEMDAIVEEAHRWHKRVAAHAHGTEAVKMAIRAGVDSVEHAS
                     LIDDEGLKLAKQHGTYLVFDIYNDDYILAEYARLGYPASVLEKERRIGRTQRESFRRA
                     VRAGAKMAFGTDAGVYPHGWNARQFAKMVEWGMTPMQAIQSATTNAANLLGWADKVGA
                     VKPGLYADLIAVDGAPLSDVSVLEHVDFVMKGGEVIKGPAPISARDE"
     gene            complement(3915..5648)
                     /locus_tag="VFM52_02145"
     CDS             complement(3915..5648)
                     /locus_tag="VFM52_02145"
                     /inference="COORDINATES: protein motif:HMM:NF017745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF885 domain-containing protein"
                     /protein_id="HET8763999.1"
                     /translation="MAALALECGSCHAGTAPGARHTPTMVNADRYVAAYFDAFPDEAT
                     FAGASAGPHDRLPDLSSAAREAWQAKEDSTWRELVTLDTTQLPSGSVDAVTYGFLKEW
                     VRNNRGLRICRMASWNVSPTANGRLSTLTGLPSVQPLGSPEKDGAALRRYAQVPRYVD
                     QDIANLREGLARGYSAATVDVQAVIRQLDALLASPITESPFAAMAPRGAGQFRSRIEA
                     LETSAIRPALTRYRDFLRDEYLAKARDAVGVSNNPDGAACYRAAIRYHSTVDIAPEEV
                     HRIGLEQMQRIRGEMQVIDSRSFGTGDVDAVLKRLRTERRYLFSGREGMLGVATAAVG
                     RARHALPRWFGILPRASMKIEPAPVFADDDAYYNPPAEDGSRPGIFYVNLNHAGTEPR
                     AGLESTTFHESYPGHHLQMAIALERRGLHAISRYFFLSGFTEGWGLYSEQLADEMGLF
                     TSDVDRMGRLSWAAVRAARLVVDSGMHALGWSRQQAIDYLLANTTLSPRNAAVEIDRY
                     IANPGQATAYMLGNLEIRNLREMAKARLGKAFDIRAFHDRVLEDGSVPLVMLRQKIER
                     WVNEKDRKTPP"
BASE COUNT          894 a         1942 c         2009 g          992 t
ORIGIN      
        1 accgacgtgg tgcccaccgg gccgctcgat cagtggacga gcgacccctt cgtgcccacc
       61 catcgcgacg gcaagctcta tggccgcggc gcggccgaca tgaagggcgc ggtggcggcg
      121 atggcggtgg cgctcgaacg cttcgtggcg gcgcatcccg gccatcccgg acgcgtcgcg
      181 ctgctgctga ccagcgacga ggaaggcccg gccaatctcg atggcgtgcg caagatggcc
      241 gaacatttcc gtgccaccaa tgagcgcatc gattggtgcg tggtgggcga gccctcggcg
      301 atcgaacggc tcggcgaccg cgtgcgcgtc ggccgccgcg gctcgttgtc cgccgtattg
      361 acggtgcacg gcgtgcaggg ccacgttgcg tatccggaga aggcgctgaa cccgatccat
      421 gcgttcgccc cggcgctggc cgagctcgct gccgagcgtt gggatgccgg caacgccgac
      481 ttcccgccga cctcgttcca ggtgtccaac ctcaacgctg gcaccggtgc gaacaacgtg
      541 attcccggcg agctcaccgc gctgatcaat ttccgctact gcaccgccag ccgggcagag
      601 gatttgcgcg cacgcaccga ggcgatcctc gcccgccacg gcgtgaagtt cacgctcgac
      661 tggaaccttt ccggcgcgcc gttcctgacc ccgccgggtg gccgcctgcg cgaggccgtg
      721 gtcggcgcgt gccgcgagct gtgcggcgtg gagccggaac aaagcaccgg cggcggcacc
      781 tccgatggcc gcttcatcgc gccgctcggt gccgaggtgg tcgaggtcgg gccggtcaac
      841 gcgagcatcc acaaggtcga cgagtgcgtg gacgtggccg agctcgagcg cctgccggac
      901 ctgtatcagg cgatctgcgc gcggatgctg gcgggctgat ggccgacgcg cgtcgcgtcc
      961 tgccgcgaca tggtttgtgg tgatacccgg aggcgggcat gcggatcgaa ttccacggtg
     1021 cggcgggcgg cgaggtcact ggttcgtgcc atctggtcga ggcggccggc aagcgcatcc
     1081 tgttcgactg cggcatggtg cagggtggcc gcgaggcgga ggcgcgcaat gccgagccgt
     1141 tcgggttcga tcccgccacc atcgatgcgc tggtgctcag ccacgcgcac atcgaccaca
     1201 tcggccgcgt gccgctgctg gtcaagcgcg gcttcacggg ggcgatctgg gcgcaggcgg
     1261 cgacctgcga gctgctgccg atcatgttgc tcgacgccgc gtcgctggcc gaacgcgacg
     1321 ccgagcgcgg caaccgcgag cgcaaggccg gcgtgccgga ggtgcgtgcg ctctataccg
     1381 cggcggacgt ggccgccgcc cagcggctgt tgcgtccgct ggcctacgac gccgcgacgc
     1441 cgatcctgcc cggcgtcacc ctgtgcctgc acgaggcggg gcacatcatg ggttcggcga
     1501 tgctcgaatt gcgcgccgat ggccgcacgc tgctgttcac cggcgacgtc ggcatgcgcg
     1561 gcacgccgat cctgcgcgac ccggcgccac cgccgcgcgc cgacctgatc ctgatggagt
     1621 ccacctacgg cgaccgcgac cacaaggacc gtgccgccac cgtggccgag ctggggcaga
     1681 tcctcgccgc agcccgcgcc gacggcggca acgtggtgat ccccgcgttc ggggtggggc
     1741 gcagccagga actcctgtac tggttcgccg aacacttcgc ggactggaac ctcgccccgt
     1801 ggacgatctt cctcgacagc ccgatggcgg cgaaggtgat ggcggtctac gacggccacg
     1861 aggagctgtt cgatgccgag gccgtgaagg tctgggccgg gcgcgtcaag ccgttccggc
     1921 tgccgaacct gcgggtcagc gaaagcgtgg acgacagcaa ggcgatcaac cgcatccacg
     1981 gtggcgccat catcatcgcc ggctccggca tggccaacgg cgggcgcgtg cgccaccact
     2041 tggcgaacaa ccttgcattc gcgcgcaacc atgtgatctt cgtgggctac caggccgccg
     2101 gcacgctggg ccgcctgctg gtcaacggcg tgccgcgcgt gcgcctgttc ggcgaggagg
     2161 tcccggtgcg cgcccgcatc cacaccgtcg gcggcctgtc cgcgcatgcc gaccagcgtg
     2221 gcttgctgga ctggtacggc gccagtccca atcatccgcc ggtggcgctg gcacatggcg
     2281 agaaccccgc acgcgaagcg ttggcggcac tgctgcggca acgcttcggt gtcgaggtga
     2341 cgctttcgca gccgcgcctg cggctcgaag tctgaggcgg ggctttccct gcggcttatt
     2401 cgtcgcgggc gctgattggc gccgggccct tgatcacctc gccgcccttc atgacgaaat
     2461 cgacgtgctc cagcaccgag acgtcgctga gcggggcgcc gtcgaccgcg atgaggtcgg
     2521 catacaaccc cggcttcacc gcgccgacct tgtccgccca gccgagcaag ttggcagcgt
     2581 tggtcgtcgc ggactggatc gcctgcatcg gcgtcatgcc ccattccacc atcttggcga
     2641 actgcctggc gttccagccg tgcggatata cgccggcgtc ggtgccgaat gccatcttgg
     2701 cgcctgcgcg taccgcgcga cggaagcttt cacgctgggt gcggccgatc ctgcgttcct
     2761 tttccagcac gctcgccgga tagccaaggc gtgcatattc cgcgaggatg tagtcgtcgt
     2821 tgtagatgtc gaagacgaga tacgtcccgt gctgtttggc gagcttcagg ccctcgtcgt
     2881 cgatcaggct cgcgtgctcc actgaatcca cgccggcgcg tatcgccatc ttgaccgcct
     2941 cggtgccatg cgcatgcgcg gcgacgcgct tgtgccagcg atgcgcctcc tcgacgatcg
     3001 catccatttc ggcttgggaa tactgcgccg agcccaccga ttcctcggca ctcatcacgc
     3061 cggcactggc ggcgaacttg atgacgtccg caccgcgctt gacgttctcg cgcaccttgg
     3121 cgcgcagccc atcgacgccg tcggcgacgc cgctggggcc gtggaattcg atgtagggcg
     3181 aaaagccggt gtagtaatcc atgtgcccgc cggtcgcgcc gagcggcagg gtggcggcca
     3241 ggatacgcgg accgacaatg gcgccgcggt cgatggcgtt gcgcagcgca acgtcgatgt
     3301 agtcgtggga gcccaggttg cggatcgtgg tgaagtccgc ctcgagcgtg tggcgggccg
     3361 ccacgtgtgc ggtgaccgca aggtcgatcg cgttccgttg cagcacgtcc tggtagtagt
     3421 tgccggacac gggttcgggt tcgtagtcga tgtgcgtgtg ggcgtcgatg aggccaggca
     3481 acagcgtcgc gccgccaaga tcgatgtgcc ggtagccgtc cggtaccgct gcgccggtac
     3541 gcacttcggt gatgcgactg ccctcgacga gaaccaatgg gtggtcgatc accttgccct
     3601 gctcaggtgc cacgaggtgc gcagcggtga tcgcgatgcg tgtcggagcg ggctccgcag
     3661 cgaacgcggc atggccgcac aacgcgacgg cgacgaacaa cagtatcgat ttcatggtgg
     3721 cctccccggt tgcttccctg gaacgcgaca accagaaatg cgcgcggctg gttggatccg
     3781 tttctccggc ggcgtggaag tactgccgct ggaacgcccg tgagtcgttg ctgccaccga
     3841 atgaccgaat ctcttgcggc caacttcgcc gtctcggatg gaccacaccc ttggaacgat
     3901 gcggcaagca gcggtcatgg cggcgtcttg cggtcttttt cgttcaccca gcgctcgatc
     3961 ttctggcgca acatcacgag tggaaccgat ccgtcctcca gaacccggtc gtggaacgca
     4021 cggatgtcga acgctttgcc gagacgggct ttggccatct cgcgcaaatt gcggatctcg
     4081 aggttgccga gcatgtacgc ggtcgcctgg ccggggtttg cgatgtagcg atcgatttcg
     4141 accgcagcgt tgcggggcga cagggttgtg ttggccagca ggtaatcgat ggcttgctgg
     4201 cgcgaccagc ccagcgcgtg catgccggaa tcgaccacca gccgggcggc ccggaccgcc
     4261 gcccaggaaa gtcttcccat gcggtccacg tccgatgtga agagccccat ctcgtcagcc
     4321 aattgctcgg agtagaggcc ccaaccttcg gtgaagccgg acaggaagaa gtaccgcgaa
     4381 atggcgtgca gtccgcggcg ctccagcgcg attgccatct gtaggtgatg gccgggatag
     4441 ctctcgtgga acgtcgtgga ctccagtcct gcccgcggtt ccgtcccggc gtggttgagg
     4501 ttgacgtaaa aaatgccggg acggctgccg tcctcggctg gcgggttgta gtacgcatca
     4561 tcgtccgcaa acaccggggc cggttcgatc ttcatgctgg cgcgcgggag gatcccgaac
     4621 caccgtggca gcgcgtgccg tgcacgcccg accgccgcgg tcgccacacc cagcatccct
     4681 tcccggccag agaacagata gcggcgttcg gtcctgaggc gcttcagcac cgcatcgaca
     4741 tcgccggtgc cgaaagaacg gctgtcgatc acctgcatct cgccccggat tctttgcatc
     4801 tgctcgagac caatgcggtg tacttcttcc ggcgcgatgt ccaccgtgga gtggtagcgg
     4861 attgcggcgc ggtagcaggc agcgccgtca gggttgttgg aaacgccaac cgcgtcgcgt
     4921 gccttggcga ggtactcgtc ccgcaggaag tcgcgatagc gcgtcaatgc agggcgaatc
     4981 gcgctggttt caagcgcctc gatgcgggat cggaattggc cggccccccg cggcgccatt
     5041 gcggcgaacg gtgactcggt gatggggctg gccaacagcg cgtcgagctg tcggatcacg
     5101 gcctgcacgt cgaccgttgc cgccgaatag ccgcgcgcga gcccctcacg gaggtttgcg
     5161 atgtcctggt caacgtagcg tggaacctgg gcatagcgac ggagcgcagc gccgtctttc
     5221 tccggcgatc cgagcggttg cacgctgggc aggccggtca acgtggacag tcgcccgttt
     5281 gcggtcgggc tcacgttcca cgacgccatg cgacagatgc gcagcccacg gttgttgcgc
     5341 acccattcct tcaggaagcc gtaggtgact gcatccacgc ttcctgatgg aagttgtgtg
     5401 gtgtcgagcg tcaccagttc ccgccaggtg gaatcctctt tcgcctgcca agcctcgcgg
     5461 gcggccgacg acaggtcagg caggcggtca tgcggtcccg cggacgcgcc ggcgaacgtg
     5521 gcttcgtccg ggaaggcgtc aaagtaggct gccacgtagc ggtcggcatt gaccattgtg
     5581 ggggtgtgcc gggcaccggg cgcggtgccg gcatggcacg aaccgcattc gagcgcgagc
     5641 gcggccacgg caagcatccc gaggcgtgca ccacggcctg gcatggactt tggaaacggc
     5701 accgtcgttc tccccgcagg cggcacgtcg cggcgaagct agcagcagca tcttgcggaa
     5761 gcaatcccgc ccgcggccgc cagcgggcgt gggttgcgcc accgcgttgc aggcaccttc
     5821 cgccccattg atccagg
//
LOCUS       DASSVL010000126         2632 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1104576,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000126 DASSVL010000000
VERSION     DASSVL010000126.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2632)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2632)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2632
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1104576"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..436
                     /locus_tag="VFM52_02150"
     CDS             <1..436
                     /locus_tag="VFM52_02150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007506960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="EscU/YscU/HrcU family type III secretion system
                     export apparatus switch protein"
                     /protein_id="HET8764000.1"
                     /translation="GNPEMKGRIRQVQQAQARRRMMEDLPRADVLVVNPTHFAVALRY
                     DDGRMGAPRVIAKGVDVLAAQIRLVAASHRIPVVEAPPLARALYATTELGREIPASLF
                     VAVAQVLAWVYQLKQAAAQGESPPAAPNPEVDPDLMGPYRDA"
     gene            449..2539
                     /gene="flhA"
                     /locus_tag="VFM52_02155"
     CDS             449..2539
                     /gene="flhA"
                     /locus_tag="VFM52_02155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008439154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009288 - bacterial-type flagellum
                     [Evidence IEA];
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis protein FlhA"
                     /protein_id="HET8764001.1"
                     /translation="MTGADVLGNFRHLARRGVGAPVIVLAMLGMLMLPMPPFLLDILF
                     SFNIALSLVILLAVVYVMRPLEFAAFPTVVLMATLLRLALNIASTRVVLLHGHDGPGA
                     AGKVIEAFGEFVIGGNFAVGLVVFAIIVVINFVVITKGATRVSEVTARFTLDAMPGKQ
                     MAIDADLNAGLLTQEQARERRQEVREEADFYGSMDGASKFVRGDATAGILILFINIVG
                     GFFVGVMQHGLSAGEAARTYTLLTIGDGLVAQVPALLLSVAAAVIVTRVSKSQDMGKQ
                     VIGQVFGQPRALGVAAAVLTVMGLIPGMPNVAFLLLGGICGGIAWLLFKRERETRERL
                     AESVAEAPAAAAPTERLELGWEDVASVDPLGLEVGYRLIPLVDTHQGGELMGRIKSVR
                     RKLSQELGFLVPAVHIRDNLDLGPNTYRITLMGVPMGEAEVHNDRLMAINPGQVHGTL
                     QGIATQDPAFGLEAVWIESGQRELAQSYGYTVVDPATVIATHLSHILGNHAHELLSHQ
                     DVQQLLDRLAQSAPKLVEDLVPKRLTLGAVVKVLQNLLAERVPIRNMRGIVESLAEHA
                     SQSQDSGALTAAVRVALGRQIAQEISGLGSEIPVITLAPELEQILLQSLQGSGPAGTA
                     VEPGVAERLQQNVADATQRQEMAGEPAVLLVAPQLRQWLARFTRHAAPGLHVLAYNEI
                     PDNRRVRLVSALGR"
BASE COUNT          412 a          859 c          944 g          417 t
ORIGIN      
        1 gggcaacccc gagatgaagg ggcgcatccg ccaggtgcag caggcgcagg cgcgccgccg
       61 catgatggag gacctgcccc gcgccgacgt gctggtggtc aaccccaccc acttcgcggt
      121 ggcgctgcgt tacgacgatg gccgcatggg cgcgccgcgg gtgatcgcca agggcgtcga
      181 cgtgctggcc gcgcagatcc gcctggtggc ggccagccac cgcatcccgg tggtggaagc
      241 gccgccgttg gcacgcgcct tgtatgcaac gactgaactg ggccgcgaaa tccccgcttc
      301 gctgtttgtc gcggtggccc aggtgcttgc ctgggtctac cagctcaagc aagccgcggc
      361 gcagggcgag agcccgccgg ccgcacccaa ccccgaggtc gatcctgacc tgatgggccc
      421 ctaccgcgat gcgtgacgag tcaaaacgat gacgggtgca gacgtactgg gcaatttcag
      481 acacctcgcg cgacggggtg ttggcgcgcc ggtgatcgtg ctggcgatgc tgggcatgct
      541 gatgctgccg atgccgccgt ttttgctgga tatcctgttc agcttcaaca tcgccttgtc
      601 gctggtgatt ttgctggcgg tggtctacgt gatgcggccg ctggagttcg ccgcgttccc
      661 caccgtggtg ctgatggcca ccttgctgcg gctggcgctc aacatcgcct ccacccgcgt
      721 ggtgctgctg cacggccacg acggccccgg cgccgccggc aaggtgatcg aggcattcgg
      781 cgagttcgtc atcggcggca atttcgccgt gggcctggtg gtgttcgcca tcatcgtggt
      841 gatcaacttc gtggtgatca ccaagggcgc cacccgcgta tcggaggtga ccgcgcggtt
      901 caccctggac gccatgcccg gcaagcagat ggcgatcgac gccgacctca acgccggcct
      961 gctgacccag gagcaggcgc gcgagcgacg ccaggaagtg cgcgaggaag cggacttcta
     1021 cggctcgatg gacggcgcct ccaagttcgt ccgcggcgac gccaccgccg gcatcctgat
     1081 cctgttcatc aacatcgtcg gcggcttctt cgtcggcgtg atgcagcatg gcctgtccgc
     1141 cggcgaggcg gcccggacct acaccctgct caccatcggc gatggcctgg tggcgcaggt
     1201 gccggcgctg ctgctgtcgg tggccgcggc ggtgatcgtc acgcgcgtgt ccaagtcgca
     1261 ggacatgggc aagcaggtga tcggccaggt attcggccag ccgcgcgcgc tcggcgtggc
     1321 ggcggcggtg ctgaccgtga tggggctgat ccccggcatg ccgaacgtgg ccttcctgct
     1381 gctgggcggc atctgcggcg gcatcgcctg gctgctgttc aagcgcgagc gcgagacgcg
     1441 cgagcggctg gccgagtcgg tggccgaggc gccggcggct gccgcgccga ccgagcggct
     1501 ggagctgggc tgggaagacg tggccagcgt cgatccgctg ggcctggaag tgggctaccg
     1561 gctgatcccg ctggtcgaca cccaccaggg cggcgagctg atggggcgga tcaagtcggt
     1621 gcgccgcaag ctgtcgcagg aactcggttt cctggtgccg gcggtgcata tccgcgacaa
     1681 cctggacctc ggccccaaca cctaccgcat caccctgatg ggcgtgccga tgggcgaggc
     1741 cgaggtgcac aacgaccgcc tgatggcgat caaccccggc caggtgcatg gcaccctgca
     1801 gggcatcgcc acgcaggacc cggcgttcgg gctggaggcg gtgtggatcg agagcggcca
     1861 gcgcgagctg gcgcagagct acggctacac cgtggtcgat ccggccacgg tgatcgccac
     1921 ccacctgtcg cacatcctgg gcaaccatgc ccacgagctg ctcagccacc aggacgtgca
     1981 gcagctgctg gaccgcctcg cgcagagcgc gccgaagctg gtcgaggacc tggtgcccaa
     2041 gcgcctgacc ctgggcgcgg tggtgaaggt gctgcagaac ctgctggccg agcgggtgcc
     2101 gatccgcaac atgcgcggca tcgtcgaatc cttggcggag cacgcatcgc agagtcagga
     2161 ttccggcgcg ctcacggccg cggtacgggt tgcgctcggt cgccagattg cgcaggaaat
     2221 cagcggtttg ggaagcgaga ttccagtgat cacgctggca cccgagttgg aacagatctt
     2281 gctccagtcg ctgcaaggca gtggtccggc cggcaccgcg gtggaaccgg gggtggccga
     2341 acggctgcag cagaacgtcg ccgatgcgac gcagcgccag gagatggcgg gcgagccggc
     2401 ggtcctgctg gtggcaccgc agttgcggca atggctggcg cgcttcacgc gtcacgccgc
     2461 gccgggactg cacgtgctgg cctacaacga gataccggac aaccgccgcg tgcgactggt
     2521 ttcggcactg ggacggtaga tacgggaatc gagaagcggg aatcggaaat cggaaaagca
     2581 ggaaccgccg cttcgtcatg cgggcgaacc ccgatccacc ttgacttggc gg
//
LOCUS       DASSVL010000127         2739 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1302108,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000127 DASSVL010000000
VERSION     DASSVL010000127.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2739)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2739)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2739
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1302108"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..518)
                     /locus_tag="VFM52_02160"
     CDS             complement(<1..518)
                     /locus_tag="VFM52_02160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007511155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TenA family transcriptional regulator"
                     /protein_id="HET8764002.1"
                     /translation="MHTRFERSGPLKDLSSYPQWTQEMVAACEPTYHQVLDHEIWWRM
                     TTLELDQASTCNFFAGLWPFIERFPSYMALNLLKTRYGRSEGDDLARRWLVRNIRVEQ
                     NHAEYWLNWAEGAGVARDRLLHEPAPAGTDGLHRWCEEISTDGSLAAGMVATNYAIEG
                     ATGEWARMIYEST"
     gene            741..>2739
                     /locus_tag="VFM52_02165"
     CDS             741..>2739
                     /locus_tag="VFM52_02165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014160424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0017000 - antibiotic biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin acylase family protein"
                     /protein_id="HET8764003.1"
                     /translation="MSRARTAHHLALRRWLTAFALALVLAPVHAGEPARLAQEAQAVT
                     ITRDDWGIAHVHGKTDADAVFGMAYAQAEDDFNRVETNYLTALGWTAQAEGESAIWQD
                     LRQQLWVDPVELKKLHAQSPAWLRKLMDAWADGLNWYLATHPDVHPKVIAHFEPWMAL
                     SFTEGSIGGDIERVSLKGLAAFYGDAHPALAAVNPPSWAEPTGSNGIAIAPKLTTDGH
                     ALLWINPHTSFYFRSELRMASDEGLDAYGAVTWGQFFVYQGFNRHIGWMHTSTGLDAV
                     DEFAETIVHKDGKPYYRYGKALRPVTAREIAVRYRAADGALKTRSFTAYFTHHGPIVK
                     RENGKWIAEALMDKPVAALEQSWLRTKAHDYASYMKVAELKANSSNNTLFADDKGEIA
                     FLMPQFVPKRDNRFDYTKPVDGSDPATDWQGLTPLNELPQAVNPPNGWAMNTNDWPYS
                     AAGKYSPKQADFPRYMDTFGENPRGIHATQLLTDARGFSKPKLIAAAFDSYLPEFAKL
                     IPILARDYDALPASDPRKAKLAGPIELLRHWDCRWGIASMPTSLAVFWGDTLWDDSVP
                     KAKAAGVSPYDYIARDGGAQERLHALDEAVDRLVQDFGSWGVAWGEINRFQRLDDAIT
                     PRFDDGKPSIPVPFVSSRWGSLASFGAHRWPGTKKYYGSSGN"
BASE COUNT          474 a          993 c          871 g          401 t
ORIGIN      
        1 gtgctttcgt agatcatgcg cgcccactcg ccggtggcgc cctcgatcgc gtagttggtc
       61 gccaccatgc ccgccgccag cgagccgtcg gtgctgatct cctcgcacca gcgatgcagg
      121 ccgtcggtac cggccggtgc cggctcgtgc agcagccggt cgcgcgccac gccggcgcct
      181 tcggcccagt tgagccaata ctcggcgtgg ttctgctcca cccggatatt gcgtaccagc
      241 cagcgccgcg ccaggtcgtc accttcgctg cggccgtagc gcgtcttcag caggttcagc
      301 gccatgtagc tcgggaagcg ctcgatgaac ggccacaacc cggcgaagaa gttgcaggtg
      361 gaggcctgat ctagctccag ggtcgtcatc cgccaccaga tctcgtgatc gagcacctgg
      421 tggtaggtgg gttcacaggc cgccaccatc tcctgggtcc attgcgggta gctgctcaag
      481 tccttgagcg ggccgctgcg ttcaaaccgg gtatgcatgg aaatctcctc gggcaagaaa
      541 ggaacgtcga ttgcgacggg cagcgcggac aacgggaatc gtccgggccg caaagcccgt
      601 cgcgaaggtt ccaaccgctc acgcccccgc gggccgcaca cggcccgccc gcggagcata
      661 agccggctgg cgacgcggga acttgccacc cctgcgtcgt gcgcccgaag atgtcccgat
      721 cccccgccac tggaatcgcc atgagccgcg cgcgcactgc gcaccacctc gccctccgcc
      781 gctggttgac cgccttcgcg ctggccctgg tgcttgcgcc ggtgcatgcc ggcgaacccg
      841 cacgactggc gcaggaagcc caggccgtca ccatcacccg cgacgactgg ggcatcgccc
      901 acgtgcacgg caagaccgat gccgacgcgg tgttcggcat ggcctatgcc caggccgagg
      961 acgacttcaa ccgcgtggag acgaactacc tcaccgcgct gggctggacg gcgcaggccg
     1021 agggcgaatc cgcgatctgg caggacctgc gccagcagct gtgggtcgat ccggtggaac
     1081 tgaagaagct ccacgcgcag agtcccgcct ggctgcgcaa gctgatggac gcctgggccg
     1141 acggcctcaa ctggtacctc gccacgcacc cggacgtgca ccccaaggtg atcgcgcatt
     1201 tcgagccgtg gatggcactg tccttcaccg agggcagcat cggcggcgac atcgagcgcg
     1261 tgtcgctgaa gggcctcgcc gcgttctacg gcgatgcgca tcccgcgctg gccgccgtca
     1321 atccgcccag ctgggccgag cccaccggct ccaacggcat cgcgatcgcg cccaagctca
     1381 ccaccgacgg ccacgcactg ctctggatca acccgcacac ctcgttctac ttccgttccg
     1441 agctgcggat ggccagcgac gagggactgg atgcctacgg cgcggtgacc tggggccagt
     1501 tcttcgtcta ccagggcttc aaccggcaca tcggctggat gcacacctcc accggcctcg
     1561 acgcggtgga cgagttcgcc gagaccatcg tgcacaagga cggcaagccg tactaccgct
     1621 acggcaaggc gctgcgcccg gtgacagcgc gcgaaatcgc cgtgcgctac cgcgccgccg
     1681 atggtgcgct gaagacgcgc agcttcaccg cgtacttcac ccaccacggc cccatcgtga
     1741 agcgcgagaa cggcaagtgg atcgccgagg cgctgatgga caagcccgtc gccgcgctgg
     1801 agcagagctg gctgcgcacc aaggcgcacg actacgcgag ctacatgaag gtggccgagc
     1861 tcaaggccaa ctcttccaac aacacgctgt tcgccgacga caagggcgag atcgcgttcc
     1921 tgatgccgca gttcgtgccg aagcgcgaca accgcttcga ctacaccaag ccggtggacg
     1981 gcagcgaccc ggccaccgac tggcaaggcc tcacgccctt gaacgaactg ccgcaggcgg
     2041 tgaacccgcc gaacggctgg gcgatgaaca ccaacgactg gccgtactcc gccgccggca
     2101 agtacagccc gaagcaggcg gacttcccgc gctacatgga caccttcggc gagaacccgc
     2161 gcggcatcca cgccacgcag ctgctcaccg atgcgcgtgg cttctccaag ccgaagctca
     2221 tcgccgccgc gttcgattcc tacctgcccg agttcgcaaa gctcatcccg atcctcgcgc
     2281 gcgactacga cgccctgccc gccagcgatc cgaggaaggc aaaactggcc ggcccgatcg
     2341 aactgctgcg ccattgggac tgccgctggg gcatcgcctc catgcccacc tcgctggcgg
     2401 tgttctgggg cgacacgctg tgggacgaca gcgtgccgaa ggcgaaggcc gccggcgtct
     2461 cgccctacga ctacatcgcc cgcgacggcg gcgcgcagga gcgcctgcac gcactcgacg
     2521 aggcggtgga tcgcctcgtg caggatttcg gcagctgggg cgtggcctgg ggcgagatca
     2581 accgcttcca gcgcctggac gacgcgatca cgccgcgctt cgacgacggc aagcccagca
     2641 tcccggtgcc gttcgtctcc tcgcgctggg gttcgctggc ctcgttcggc gcgcaccgct
     2701 ggccgggcac gaagaagtac tacggctcca gcggcaaca
//
LOCUS       DASSVL010000128         2811 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1118447,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000128 DASSVL010000000
VERSION     DASSVL010000128.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2811)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2811)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2811
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1118447"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(65..1111)
                     /locus_tag="VFM52_02170"
     CDS             complement(65..1111)
                     /locus_tag="VFM52_02170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0000902 - cell morphogenesis [Evidence
                     IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein"
                     /protein_id="HET8764004.1"
                     /translation="MFKKFRGIFSNDVSIDLGTANTLIYVRGQGIVLNEPSVVAIRQD
                     RGPGGPRAIAAVGGEAKRMLGRTPGNIATVRPMKDGVIADFTMTEAMLQYFIKQVHKS
                     RFLRPSPRVLVCVPCGSTQVERRAIKESAEGAGARDVYLIEEPMAAAIGAGIPVHEAR
                     GAMVLDIGGGTSEVAVISLNGIVYSQSVRIGGDRFDEAIINYVRRNHGTLIGESTAER
                     IKLEIGCAFPQADVKEIDISGRNLAEGVPRMITINSNEILEALHEPLAGIVAAVKAAL
                     EQTPPELCSDVAERGIVLTGGGALLRELDRLISEETGLHVQVADDPLTCVARGGGRAL
                     ELVDMHGNEFFAPD"
     gene            1368..2303
                     /locus_tag="VFM52_02175"
     CDS             1368..2303
                     /locus_tag="VFM52_02175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008437272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate kinase family protein"
                     /protein_id="HET8764005.1"
                     /translation="MSAVICGSLAYDTIMVFQDQFKNHILPDQMHILNVSFLVPKMRR
                     EFGGCAGNIAYNLKLLGGDPLPVAAVGQDFAPYRAHLEHCGIRLDHVRVFDDQFTPQC
                     FITTDLDNNQITAFHPGAMSSAHDNHVRDIPGMEFAIVAPDGREAMLQHVDEFHARGV
                     PFVFDPGQAMPLFSGEEFRSMIEKSTYVIVNDYESQLLQTRTGWSAAEIAARVEAYIV
                     TLGPRGSLIHAGGVDYEIPPAHEHAIVDPTGCGDAYRAGLIFAIMHGKDWATVGRVAS
                     LMGAIKIEHPGTQNQHFDYAGFAATFKQQFGHALD"
     gene            complement(2325..>2811)
                     /locus_tag="VFM52_02180"
     CDS             complement(2325..>2811)
                     /locus_tag="VFM52_02180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008433809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="beta-eliminating lyase-related protein"
                     /protein_id="HET8764006.1"
                     /translation="SGVGARAIAQHFDTVSVCLSKGLGAPVGSVLVGSAPLIAKARRW
                     RKVLGGGWRQAGMLAAAGLYALDHHVGRLADDHRRAAYLAGRLREIAGLDLLGQYTNM
                     VFVDVPVARLQALDEHLRAQSIRISIGYLPTLRLVTHLDVDDADIEHVVQAFRGFFAR
                     G"
BASE COUNT          465 a         1003 c          917 g          426 t
ORIGIN      
        1 gctcagcgac cgccgttgcg ggacgcacgc gtcgatcgcg atcgcggcgt cccgggatgc
       61 atcgtcagtc gggcgcgaag aactcgttgc cgtgcatgtc gaccagctcg agcgcacggc
      121 caccgccgcg cgccacgcag gtcagcggat cgtcggccac ctggacgtgg aggccggtct
      181 cctcggagat cagccgatca agctcgcgca gcagcgcgcc gccgccggtg agcacgatgc
      241 cgcgctcggc gacgtccgag cacagctcgg gcggagtctg ctcgagcgcc gccttgaccg
      301 cggcgacgat gccggcgagc ggctcgtgca acgcctcgag gatctcgttg gagttgatcg
      361 tgatcatccg cggcacgccc tcggcaaggt tgcgcccgga gatgtcgatc tccttgacgt
      421 cggcctgcgg gaacgcgcag ccgatttcca gcttgatccg ctcggcggtg gactcgccga
      481 tcagcgtgcc gtggttgcgc cgcacgtagt tgatgatggc ctcgtcgaag cgatcgccgc
      541 cgatgcgcac cgactgcgag tagacgatgc cgttgagcga gatcaccgcc acctcggagg
      601 tgccgccgcc gatgtcgagc accatcgcgc cgcgcgcctc gtgcaccggg atgccggcgc
      661 cgatcgcggc cgccatcggt tcctcgatca ggtacacgtc gcgcgcaccg gcgccttcgg
      721 ccgattcctt gatcgcgcgg cgctcgacct gggtcgaacc gcacggcacg cacaccagca
      781 cgcgcgggct cgggcgcagg aaccggctct tgtgcacctg cttgatgaag tactgcagca
      841 tcgcctcggt catggtgaag tcggcgatca cgccgtcctt catcggccgc acggtggcga
      901 tgttgcccgg cgtgcggccg agcatgcgct tggcctcgcc gcccaccgca gcgatcgcgc
      961 gcgggccgcc ggggccgcga tcctggcgaa tggcgacgac cgaaggctcg ttcagcacga
     1021 tgccctggcc gcgcacgtag atcagcgtgt tggcggtgcc gagatcgatc gagacgtcgt
     1081 tggagaagat tccgcgaaac ttcttgaaca tggagggcta ccgcgtgccg cgcaagtgaa
     1141 aaacaagctg gccagtctag tcagcgcctg ccccgcacgc aaccgcgagg gtgttaaaaa
     1201 acccttgttt ctcgccgggt tccggcgact tcgtgcacgc ttccaccaac ccggcgttcg
     1261 ccgcgccacg gcgttcacga taggatggaa gctttggcaa cgcggtgcac ccggcgcgcg
     1321 ttcgtcgtgc ccgccgcccg cctcatccac gagaccatca ggccaccatg tcagccgtca
     1381 tctgcggatc gctcgcctac gacaccatca tggtgttcca ggatcagttc aagaaccaca
     1441 tcctgcccga ccagatgcac atcctgaacg tctcgttcct ggtgcccaag atgcgccgcg
     1501 agttcggcgg ctgcgccggc aacatcgcct acaacctgaa gctgctcggc ggcgacccgc
     1561 tgccggtggc ggccgtgggc caggacttcg cgccctaccg cgcgcacctc gagcactgcg
     1621 gcatccgcct cgaccacgtg cgcgtgttcg acgaccagtt caccccgcag tgcttcatca
     1681 ccaccgacct cgacaacaac cagatcaccg ccttccatcc cggcgcgatg tccagcgcgc
     1741 acgacaatca cgtgcgcgac atccccggca tggagttcgc catcgtggcg ccggacggcc
     1801 gcgaggcgat gctgcagcac gtggacgagt tccacgcgcg cggcgtgccg ttcgtgttcg
     1861 atccgggcca ggcgatgccg ctgttcagcg gtgaggaatt ccgctcgatg atcgagaagt
     1921 cgacctatgt catcgtcaac gactacgagt cgcaactgct gcagacgcgc accggctgga
     1981 gcgccgcgga aatcgccgcg cgggtcgagg cgtacatcgt cacgctggga ccgcgcggct
     2041 cgctaatcca tgccggcggc gtcgactacg agattccgcc ggcgcacgaa cacgccatcg
     2101 tcgaccccac cggttgcggc gatgcatacc gcgccggcct gatcttcgcg atcatgcacg
     2161 gcaaagactg ggccaccgtg ggccgcgtcg cctcgctgat gggcgcgatc aagatcgaac
     2221 accccggcac ccagaaccag catttcgact acgccgggtt cgccgcgacg ttcaagcagc
     2281 agttcggcca cgcgctggac tgagcgcgcg gggccgcggc ggcatcagcc gcgggcgaag
     2341 aacccgcgga acgcctgcac cacgtgctcg atgtcggcat cgtcgacgtc gaggtgggtc
     2401 accagccgca aggtcggcag gtagccgatg ctgatgcgga tgctctgtgc gcgcaggtgc
     2461 tcgtccagtg cctgcagacg cgcgaccggc acgtcgacga acaccatgtt ggtgtactgg
     2521 ccgagcaggt ccagcccggc gatctcgcgc aagcggccgg cgagataggc tgcgcggcga
     2581 tgatcgtcgg ccagccgccc gacgtggtga tccagcgcgt acaggccggc cgccgccagc
     2641 atgccggcct ggcgccagcc gccgccgagc accttgcgcc agcgccgcgc cttggcgatc
     2701 agcggcgcgg aaccgaccag caccgaaccc accggcgcac ccaggccctt ggacaggcac
     2761 accgacaccg tgtcgaaatg ctgcgcgatc gcgcgcgcac cgacgcccga g
//
LOCUS       DASSVL010000129         2073 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1217502,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000129 DASSVL010000000
VERSION     DASSVL010000129.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2073)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2073)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2073
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1217502"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..239)
                     /locus_tag="VFM52_02185"
     CDS             complement(<1..239)
                     /locus_tag="VFM52_02185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019465930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HET8764007.1"
                     /translation="MELIRNFSIIAHIDHGKSTLADRIIEICGGLAQREMEAQVLDDN
                     PIERERGITIKARSVSLPYTARDGKTYQLNFIDTPG"
     gene            complement(386..1879)
                     /locus_tag="VFM52_02190"
     CDS             complement(386..1879)
                     /locus_tag="VFM52_02190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017461135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DegQ family serine endoprotease"
                     /protein_id="HET8764008.1"
                     /translation="MISSVQRSQRVRLLASCLLAIGAGFAVPVPSVAAQAAPAMSALP
                     DFTGIVQKNAPAVVQVEAKYDGHSKPSVRGRNAQGPGGMPDDPQAELFRRFFGMPMMP
                     SPAEQAHTSLGSGFIISADGYILTNNHVVANADKVTVRMQDRRILDAKVVGTDPTYDI
                     ALLKVSAGSNLPTVSIGDSRSLKPGQWVLAIGSPFGFDYTVTQGIVSAIGRNLGSQDQ
                     PYTSFIQTDVPINRGNSGGPLFNLQGQVVGINSQIYSGTGGYQGVSFSIPIDVAMNAV
                     DQLKTKGYVTRGQLGVVVGPVEDSAVKALHLPDSEGGLVAQVSPGSGAEKAGIQAGDI
                     ILAYDGQAIRTASDLPPLVGLTKPGTRVPVEILRNGKKQTLQVTVGAMPRDQNAVSDG
                     GAAPAAGSTGSSALGISVRPLDEAARKQMGLKAGQGVAIGNVTGEVAAQAGLQPGDVV
                     LMVNQQPVGSVAAFAQATKGVKAGSTVLLLVRRGEQNRFFGLTVPKD"
BASE COUNT          310 a          705 c          702 g          356 t
ORIGIN      
        1 cccggggtgt cgatgaaatt gagctggtag gtcttgccgt cgcgcgcggt atacggcagc
       61 gacaccgagc gcgccttgat ggtgatgccg cgctcgcgct cgatcgggtt gtcgtcgagc
      121 acctgcgctt ccatctcgcg ctgcgcgagg ccgccgcaga tttcgatgat gcggtcggcc
      181 agcgtcgact tgccgtggtc gatgtgggca atgatggaaa agttgcggat gagttccatg
      241 gagcgcggtt cggcaccgat acgtttgggc cgccgcgaaa accgcgacgg gaaccccgta
      301 ttgtcgcatg gaaccacggc gcgccgtgcc gccattcccc tggccatcgg caccacggcc
      361 acgcctgccg tggtgccgga tatcgtcaat ccttcgggac ggtgaggccg aagaagcggt
      421 tctgctcgcc gcgacggacg agaagcagca ccgtcgaacc cgccttcacg cccttcgtcg
      481 cctgcgcaaa ggccgccacg ctgcccaccg gctgctggtt caccatcagc accacgtcgc
      541 ccggctgcag cccggcctgc gccgcgacct cgccggtgac attgccgatc gcgacgccct
      601 gccctgcctt cagccccatc tgcttgcgcg ccgcttcatc cagcgggcgc acgctgatgc
      661 ccagcgcgct gctgccggtg ctgccggccg caggtgcggc accaccgtcg ctgacggcgt
      721 tctggtcacg cggcatggcg cccaccgtca cctgcagcgt ctgcttcttg ccgttgcgca
      781 ggatttcgac cggcacccgc gtgcccggct tggtcaggcc gacgagtggc ggcagatcgg
      841 aggcggtgcg gatcgcctgg ccgtcgtagg ccaggatgat gtcgccggcc tggatgccgg
      901 ctttctcggc gccgctgcct ggcgacacct gcgccacgag gccaccctcg ctgtccggca
      961 gatgcagcgc cttgaccgcg ctgtcctcga ccggccccac gacgacgccg agctggccgc
     1021 gcgtcacgta gcccttggtc ttgagctggt ccaccgcgtt catcgccacg tcgatcggaa
     1081 tcgagaacga caccccctgg tagccgccgg tgccggaata gatctgcgaa ttgatgccga
     1141 ccacctggcc ctgcaggttg aacagcgggc cgccggaatt gccgcggttg atcggcacgt
     1201 cggtctggat gaacgaggtg tagggctggt cctggctgcc caggttgcgg ccgatggcgc
     1261 tgacgatgcc ctgggtcacc gtgtagtcga agccgaacgg cgagccgatc gccagcaccc
     1321 attgccccgg cttgaggctg cgcgaatcgc cgatgctcac cgtgggcagg ttgctgcccg
     1381 cgctcacctt gagcaaggcg atgtcgtagg tgggatcggt gccgaccacc ttggcatcga
     1441 ggatgcgccg gtcctgcatg cgcaccgtca ccttgtcggc attggccacc acgtggttgt
     1501 tggtgaggat gtagccgtcc gcggaaatga tgaagcccga acccagcgag gtatgcgcct
     1561 gctcggccgg cgacggcatc atcggcatgc cgaagaagcg gcggaacagc tcggcctgcg
     1621 ggtcgtccgg catgccgccc ggaccctgcg cattgcggcc gcgcacgctg ggcttgctgt
     1681 ggccgtcgta cttcgcctcc acctgcacca ctgccggcgc gttcttctgc acgatgccgg
     1741 tgaaatcggg cagcgcagac atcgctggcg ccgcctgtgc ggcgacactg ggaaccggca
     1801 ccgcgaatcc ggcaccgatg gcaagcaggc aactggcgag caagcgcacg cgctggctgc
     1861 gctggacgga cgagatcatg acgtctcctt ggtttgctgc agaggggtgg aatcacacgc
     1921 acaccacctt tgcaggcggt cgatggcccg caggacgtgc gtggaaggaa tcgggccgcg
     1981 gagcatgcac gcggcagaca tcactgggcg ttggccgccc gccgttgcgt cgtcgctgcc
     2041 gcctgttgcg ccgggtcgat caggatcagg tag
//
LOCUS       DASSVL010000130         2195 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_779927, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000130 DASSVL010000000
VERSION     DASSVL010000130.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2195)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2195)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2195
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_779927"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(96..1223)
                     /locus_tag="VFM52_02195"
     CDS             complement(96..1223)
                     /locus_tag="VFM52_02195"
                     /inference="COORDINATES: protein motif:HMM:NF024110.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HET8764009.1"
                     /translation="MNQFSSARLLAVLRKEWVQMRRDRATVGLTVMLPLIQLFLFGYA
                     INANPRHLPTGLTTAEHSTYERTLVAALQNTRYFDVRPFDTEAAAEEALRRGDVMFVL
                     NIPPDFSRRIDRGEQPQVLMDADATDPTAIANATAAVVALNATVLNRDLPVAMRVQPA
                     QPPFEIVLHARYNPEQITALNIVPGLIGLILTVSTLVTTTLAITREREMGTMENLLAM
                     PVRPVEVMLGKIIPYIGLAYVQTVLILVVSVAVFDVPVRGSIPLLLLALGVFIACNLA
                     MGFTFSTLAQTQMQAQQLSQFGLLPSIMLSGFMLPFQGMPTWARWVGEAVPLTHTLRI
                     CRGMLLKGNGLAEIWPDLWPMLVFALVVGAIAVSLYRETLD"
     gene            complement(1220..2131)
                     /locus_tag="VFM52_02200"
     CDS             complement(1220..2131)
                     /locus_tag="VFM52_02200"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HET8764010.1"
                     /translation="MTALAIDVHDLRKKFGTRQVIDGLTLQVPEGEICGFLGGNGSGK
                     TTTIRMLCGLLRPDTGGGTCLGLDLLRDAARIRLQIGYMTQRFSFYGDLTVGENLEFV
                     ARLYQIPEYRRRIAEVLDRIGLSDRVNQLAQELSGGWKQRMALAACVLHRPRLLLLDE
                     PTAGVDAKARREFWDMIHEMAADGMTVLVSTHYMDEAERCQRVVYLAGGRLVVQGTAD
                     EVVRAAHLVTFEATGDGIEQVVRQLRRTRGVETAAVFGRALRIAGMDRTALRAAIDGL
                     GDDGLQWQEVEPRLDDVFIHMLRDSEA"
BASE COUNT          424 a          711 c          677 g          383 t
ORIGIN      
        1 attgcatcgc ccgatgctca agtcgctgtc aactcacgat tgaggcacag tcattcgggt
       61 gtggtgtcga gtgtgcctcg gccacgcttc ctaactcagt ccagcgtctc gcgatacaga
      121 ctgacggcga tcgcaccgac caccagagca aacaccagca tcggccatag atcgggccag
      181 atctccgcca ggccgttgcc cttcagcagc atgccgcgac agatgcgcaa cgtgtgagtc
      241 agcggcaccg cttctccgac ccagcgagcc caggtgggca tgccctggaa cggtaacatg
      301 aagcccgaca gcatgatcga cggcagcagg ccgaattgcg acaactgctg tgcctgcatc
      361 tgggtctgcg ccagggtgga gaaggtgaac cccatcgcca ggttacaggc aatgaacacg
      421 cccaatgcca gcagcaacag tggaatcgag ccgcgcaccg gaacgtcgaa caccgcaacc
      481 gacaccacca ggatcagcac ggtctgcacg taagcaagtc caatataggg gatgatcttg
      541 cctagcatga cctcgacagg gcgcaccggc atggccagca ggttctccat ggtgcccatc
      601 tcgcgctcgc gcgtgatcgc gagcgtggtc gtgacaagtg tggatacggt caggatcagc
      661 ccgatcaggc cagggacgat gttgagcgcg gtgatctgtt ccggattgta gcgcgcatgc
      721 agcacaatct cgaaaggtgg ctgtgccggc tgcacgcgca ttgccaccgg caggtcacgg
      781 ttcagcaccg tcgcgttcaa cgccacaaca gcggcggtgg cattggcgat tgcggtcgga
      841 tcggtggcat cggcgtccat cagcacctgc ggctgttcgc cgcgatcgat gcgccgcgaa
      901 aagtccggcg gaatgttcag cacgaacatg acatcgccac gccgcagggc ttcttctgcc
      961 gcggcctcgg tgtcgaaggg ccttacgtcg aaatagcgcg tgttctgcag tgccgccacc
     1021 agcgtgcgct cgtaggtcga atgttcggcg gtggtcaggc cggtcggcag gtggcgcgga
     1081 ttggcgttga tcgcgtagcc gaacaggaag agttggatca gcggcagcat caccgtcagt
     1141 ccgaccgtgg cgcggtcgcg ccgcatctgc acccactctt tgcgcaagac cgccagcagg
     1201 cgagcactgg aaaattggtt catgcctcgc tgtcccgcag catgtggatg aacacgtcat
     1261 caagccgcgg ctccacttcc tgccactgca ggccgtcatc accgagacca tcgatcgcag
     1321 cgcgcaatgc ggtgcggtcc atgccagcga tgcgcaaggc gcgaccgaat accgcagccg
     1381 tctcgacgcc cctggtgcgc cgcaattgtc gcactacctg ttcgatgccg tcgccggtgg
     1441 cttcgaacgt gaccagatgc gcagcgcgca ccacttcgtc ggccgtgccc tgcaccacaa
     1501 ggcgtccgcc ggcgagatac accacgcgct gacagcgctc cgcttcgtcc atgtaatgcg
     1561 tggagaccag caccgtcatg ccatcggcag ccatctcgtg gatcatgtcc cagaactcgc
     1621 gccgcgcctt ggcatccaca ccggccgtgg gttcatcgag cagcagcagt cggggtcggt
     1681 gcagcacgca ggctgcgagt gccatgcgct gcttccaccc gccggagagt tcctgcgcaa
     1741 gttgattgac gcgatcagac aggccgatgc gatccagcac ctctgcgatg cggcggcgat
     1801 actcaggtat ctgatagaga cgcgcgacga actccaggtt ctcgccaacc gtcaggtcgc
     1861 cgtagaagct gaagcgttgc gtcatatagc cgatctgcag gcgaatgcgc gctgcgtcgc
     1921 gcagcagatc aagccccagg cacgttccgc cgccggtgtc cggacgcaga aggccgcaca
     1981 gcatgcggat ggtcgtggtc ttgccgctgc cgttgccgcc aaggaatccg cagatctcac
     2041 cttccggtac ctggagcgtc agcccatcga tgacctgccg ggtgccaaat ttcttacgca
     2101 ggtcgtgcac gtcgatggcg agcgcggtca tcggcgcaca tcgaccggct ggccaggctt
     2161 cagttgcatt gcctgatcca gccgcggatg cgctt
//
LOCUS       DASSVL010000131         3317 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_949221, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000131 DASSVL010000000
VERSION     DASSVL010000131.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3317)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3317)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3317
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_949221"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..957
                     /gene="epmB"
                     /locus_tag="VFM52_02205"
     CDS             <1..957
                     /gene="epmB"
                     /locus_tag="VFM52_02205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007510521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0072581 - protein-N6-(L-lysyl)-L-lysine
                     modification to protein-N6-(beta-lysyl)-L-lysine [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EF-P beta-lysylation protein EpmB"
                     /protein_id="HET8764011.1"
                     /translation="QLWREAVTDAAELLALLGLSPLAPRLPPADAGFALRVPRGFVAR
                     MRPGDPHDPLLLQVLPQLAELDEVTGFVADAVGDLAAREAQGVLHKYHGRALLIASGS
                     CAVNCRYCFRRHFPYAEELAAANTWREAIDCLSRDTSIREVILSGGDPLVLSTGKLEA
                     LTDGLSGLPHVIRLRIHSRLPVVLPERIDDAFCAWLSTLPLQRVMVLHANHPNELDAG
                     VEAACVRLRETGATLLNQSVLLRGVNDDVEALGELSERLFACGVLPYYLHQLDRVRGT
                     AHFEVPDARARELVDSLRARLPGYLVPRLVRELPGEGAKTPI"
     gene            1085..3154
                     /locus_tag="VFM52_02210"
     CDS             1085..3154
                     /locus_tag="VFM52_02210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008434454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HET8764012.1"
                     /translation="MLPEPITKLIIAEDQAEDAEQIISVLRNSGIALRPQRVSTEEEL
                     AATLESLIPDMVLANPACKEISLDTIARALDATGKDVALLALTDRLTDDLVAEILTQG
                     SVRGIALRNRHDQLQTVVRRELDALDTRRNVRRLEAALRESERRCDSLLDSSRDPIAY
                     IHEGTHVRANNAYLEMFGFESFEDVEGLTILDLVAPQHTADFKDLLKRLARGEKPPPR
                     LDLTAQRADGSAFDAVMEFSPATYEGEPCQQIVFRLPASSPEAEEELRRLKTQDPLTG
                     LSNRTHFLELIDEAVARAIGGTTDQALLLLEPDNYRHVIDTVGITGADDVLRQLAGTI
                     KQRLRATDTAGRIGDHAFGILLSNSPQAEVQKTAESLRSSIEAAIIEASGKSTSLTIS
                     IGGSLLGEKNAKSQVLLSQADDALRAAAGQGGNRIDIHDPAAADKAEAAREQQWLELI
                     DAALAKDGFVLYYQPIVSLQGEEGEFFEVLLRMRGPTEEVLPAHFMPIAERNDRLLAI
                     DRWVIEHAIATLGKRPAKSAPATLFVKLSTLTLHDETLADWVDAKLSAAGVQASQLVF
                     EVPEAKVMTCLKPAREFVERWRKGGGGFELEQFGSGLNSFQTLKHVDADYLKIDRALT
                     NDLAHHAENEQKVRELCSQARAAGKRTMVEWIEEATSMPMLFSAGVNFAQGNFLATPS
                     AEMRYVT"
BASE COUNT          570 a         1194 c         1046 g          507 t
ORIGIN      
        1 caactgtggc gcgaggccgt caccgacgcc gccgagctgc tggccctgct tggcctttcg
       61 ccgctggcgc cgcgcctgcc ccccgccgat gccggcttcg ccctgcgcgt gccgcgcggc
      121 ttcgtggccc gcatgcgtcc cggcgacccg cacgacccgc tgctgctgca ggtgttgccc
      181 caactggccg aactggacga agtgaccggc ttcgtcgccg acgcggtggg cgacctggcc
      241 gcccgcgagg cgcagggcgt gctgcacaag taccacggcc gcgccctgct gatcgccagc
      301 ggcagctgcg cggtcaactg ccgctactgc ttccgccggc actttcccta cgccgaggaa
      361 ttggccgccg ccaacacctg gcgcgaggcg atcgactgcc tgtccaggga cacctcgatt
      421 cgcgaggtga tcctgtccgg cggcgatccg ctggtcctct cgaccgggaa gctggaagcc
      481 ttgaccgatg gcctgagcgg cctgccccac gtgatccgcc tgcgcatcca ttcgcgcctg
      541 ccggtggtgc tgccggagcg catcgacgat gctttttgcg cttggctgtc cacgttgccg
      601 ctgcaacgcg tgatggtgct gcacgccaac catccgaacg aactcgacgc cggcgtcgaa
      661 gcggcgtgcg tacgcctgcg cgaaaccggc gcgacactgc tcaaccaatc tgtgctgctg
      721 cgcggcgtca atgacgatgt cgaagcgctg ggcgaactct cggagcgcct gttcgcctgc
      781 ggcgtgctgc cctactacct gcaccagctc gaccgcgtgc gcggcaccgc gcatttcgaa
      841 gtgccggatg cacgcgcccg cgaactcgtg gattccttgc gtgcacgcct gcccggctac
      901 ctggtcccgc gcctggtccg cgaactgccc ggcgaaggcg cgaaaacccc gatttgatgc
      961 ggcggctggc gccgcccatc ctgatcgggt acaactgccg gcatggaaat catgaacgag
     1021 gcggccggcc cgcatccacg ggcgtggggc gccatcccgc ggttcccgca acccagaggc
     1081 tgcaatgttg cctgaaccga ttaccaagct gatcatcgcc gaggatcagg ccgaggacgc
     1141 cgagcagatc atcagcgtgc tgcgcaacag cggcatcgcg ctgcgcccgc aacgtgtctc
     1201 gaccgaggaa gaactggcgg cgacgctgga atctttgatc ccggacatgg tgcttgcgaa
     1261 cccggcgtgc aaggaaattt cgctggacac gatcgcacgt gcgctggacg ccaccggcaa
     1321 ggacgtcgcg ctgctcgcgc tcaccgatcg cctcaccgac gacctcgtcg ccgagatcct
     1381 cacccagggc agcgtccgcg gcatcgcctt gcgcaatcga cacgaccagt tgcagaccgt
     1441 cgtgcgccgc gaactggatg cactggatac gcgccgcaac gtgcgcaggc tcgaagccgc
     1501 gctgcgcgaa tcggagcggc gttgcgattc gctgctggat tcctcgcgcg acccgatcgc
     1561 gtacatccac gaaggcaccc acgttcgcgc caacaacgcc tacctcgaaa tgttcggctt
     1621 cgaaagtttc gaggacgtgg aaggcctgac catcctcgac ctggtcgcgc cgcaacacac
     1681 tgccgacttc aaggacctgc tgaagcgcct cgcgcgcggc gagaaaccgc cgccgcggct
     1741 ggacctcacc gcccagcgcg ccgacggcag cgccttcgac gcggtgatgg aattttcgcc
     1801 cgccacgtac gagggcgagc cctgccagca gatcgtgttc cggctgccgg cttccagccc
     1861 cgaggcagag gaagaactgc gccgcctgaa gacccaggat ccgctcaccg gcctttccaa
     1921 ccgcacgcac ttcctcgaac tcattgacga ggccgtggcg cgcgcgatcg gcggcaccac
     1981 cgaccaggcg ctgctgctgc tggaaccgga caactaccgg cacgtcatcg acaccgtcgg
     2041 catcaccggc gccgacgacg tgctgcgcca gctggccggc accatcaagc agcgcctgcg
     2101 cgccaccgac accgccggcc gcatcggcga ccacgccttc ggcatcctgc tgtccaacag
     2161 cccgcaggcg gaagtgcaga aaaccgccga gtcgctgcgc agcagcatcg aggccgcgat
     2221 catcgaggcg agcggcaaat ccaccagcct caccatcagc atcggcggca gcctgctggg
     2281 cgagaagaac gcgaagtcgc aagtgctgtt gtcgcaggcc gatgacgcgc tgcgcgccgc
     2341 ggccgggcaa ggtggcaacc gcatcgacat ccatgatccg gccgccgccg acaaggccga
     2401 ggccgcgcgc gaacagcaat ggctggagct gatcgacgcc gcgctcgcca aggatggctt
     2461 cgtgctctat taccagccca tcgtcagcct gcagggcgag gaaggcgagt tcttcgaagt
     2521 gctgctgagg atgcgcggcc cgaccgagga agtactgccc gcgcatttca tgcccatcgc
     2581 cgagcgcaac gaccggctgc tcgccatcga ccgctgggtg atcgaacatg ccatcgccac
     2641 gctcggcaag cgtcccgcca aatcggcgcc cgccaccctt ttcgtcaagc tctcgacgct
     2701 caccctgcac gatgaaacgc tggcggactg ggtcgatgcg aaattgtccg cggccggcgt
     2761 ccaggcttcg caactggtgt tcgaagtgcc cgaggccaag gtgatgacct gcctgaaacc
     2821 cgcgcgcgaa ttcgtcgaac gctggcgcaa gggcggcggc ggtttcgagc tggagcagtt
     2881 cggttccggc ctcaattcgt tccagaccct caagcacgtc gacgccgatt acctgaagat
     2941 cgaccgcgcg ctcaccaacg acctcgcgca tcatgcggag aacgagcaga aggtgcgcga
     3001 actgtgctcg caggcgcgcg ccgccggcaa gcgcacgatg gtcgagtgga tcgaggaagc
     3061 gaccagcatg ccgatgctgt tctcggccgg cgtcaacttc gcacagggca acttcctcgc
     3121 gacgccgtcg gccgagatgc gctacgtgac ctgacgcggg accccggatt ccaaggcgta
     3181 ctgcgcttca ccccttcgga acgaaggggt cgcgtaccgg aggcgcgcgg gggatgttcc
     3241 ggctccagat tccctaatgg ccgctttcgc ggcaaactgc acgcatggcc gtcgcacccc
     3301 gccccgtttc cgccccg
//
LOCUS       DASSVL010000132         2228 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_59164, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000132 DASSVL010000000
VERSION     DASSVL010000132.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2228)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2228)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2228
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_59164"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..851)
                     /locus_tag="VFM52_02215"
     CDS             complement(<1..851)
                     /locus_tag="VFM52_02215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017155625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Glu/Leu/Phe/Val dehydrogenase dimerization
                     domain-containing protein"
                     /protein_id="HET8764013.1"
                     /translation="MIFETIAGTGHEQVVFCQNQDAGLKAIIAIHNTVLGPALGGLRM
                     WPYKSEEEAVNDVLRLSRGMTYKNAVAGLNLGGGKAVIIGDPSKDKSEALFRAFGRFV
                     NSLGGRYITAEDVGIDVNDMEYVFRETEYVTGVHQVHGGSGDPSPFTAYGALQGLMAT
                     LHFRHGNEDVGKYSYAVQGCGHVGGELIKLLREQGAKVFVTDINKQAVQRCVDELGCE
                     AVGIDEIYDVDADVFSPCALGGTVNEKTIDRIKAKIICGPANNQLANDAIGEEVEKRG
                     LLYAPDYA"
     gene            complement(1089..1163)
                     /locus_tag="VFM52_02220"
     tRNA            complement(1089..1163)
                     /locus_tag="VFM52_02220"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1129..1131),aa:Val,seq:cac)
     gene            1261..1593
                     /locus_tag="VFM52_02225"
     CDS             1261..1593
                     /locus_tag="VFM52_02225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014403291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008915 - lipid-A-disaccharide synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipid-A-disaccharide synthase N-terminal
                     domain-containing protein"
                     /protein_id="HET8764014.1"
                     /translation="MPHDLAQILQALQQFHLTPWKLVGYTGMALFTSRWFVQLYYTRK
                     YKRVVMPLAFWWLSVLGSVLLLAYFTVGKNDSVGILSNLFPVFVSVYNLAVHLRHRRA
                     GAEIEKGA"
     gene            complement(1657..>2228)
                     /locus_tag="VFM52_02230"
     CDS             complement(1657..>2228)
                     /locus_tag="VFM52_02230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017908348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008705 - methionine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="vitamin B12 dependent-methionine synthase
                     activation domain-containing protein"
                     /protein_id="HET8764015.1"
                     /translation="PDLCLADFITPKAFGKPDWIGGFAVTAGLGIEKHLERFRAELDD
                     YSAILLKALADRLAEAFAERMHERVRREFWGYAPDESLDNEELIAERYRGVRPAPGYP
                     ACPDHTEKATLFKLLDATKNAGIELTEGFSMYPAAAVSGWYYSHPASQYFVVGRLGKD
                     QVADYAKRKGWTLAEAEHWLSANLDYEPE"
BASE COUNT          342 a          732 c          746 g          408 t
ORIGIN      
        1 gcgtagtccg gcgcgtacag caggccgcgc ttttccactt cctcgccgat cgcgtcgttc
       61 gccagctggt tgttcgccgg gccgcagatg atcttcgcct tgatccggtc gatggtcttc
      121 tcgttgaccg tgccgccgag cgcgcacggc gagaacacgt cggcgtcgac gtcgtagatc
      181 tcgtcgatgc cgaccgcctc gcagccgagc tcgtccacgc agcgctgcac cgcctgcttg
      241 ttgatgtcgg tgacgaacac cttggcgccc tgttcgcgca gcagcttgat cagctcgccg
      301 ccgacgtggc cgcagccctg caccgcgtag ctgtacttgc ccacgtcctc gttgccgtgg
      361 cggaagtgga gggtggccat caggccctgc agcgcgccgt aggcggtgaa cggcgaggga
      421 tcgcccgagc cgccgtgcac ctggtgcacg ccggtgacgt attcggtctc gcggaacacg
      481 tattccatgt cgttgacgtc gatgccgacg tcctcggcgg tgatgtagcg cccgccgagc
      541 gaattcacga agcggccgaa cgcgcggaac agcgcctcgg acttgtcctt cgagggatca
      601 ccgatgatca ccgccttgcc gccgccaagg ttcaggccgg ccaccgcgtt cttgtaggtc
      661 atgccgcgcg agaggcgcag cacgtcgttg acggcttcct cctcgctctt gtacggccac
      721 atgcgcagcc cgcccagcgc cgggccgagc acggtgttgt ggatggcgat gatggccttg
      781 aggccggcat cctggttctg gcagaacacg acctgttcgt ggccggtacc ggcgatggtt
      841 tcgaaaatca ttgctgcaac gactccaagc aaactgcccg caggcatcgg tgggtggcgg
      901 cgggtgatcc gcggccgggt gacgaccgcc cctgtccggc ctgcccgaaa cagggccggg
      961 caacgaagca agtccggcat tgtagtacgc gagccgcctg cgcctgtggc aacgcagcaa
     1021 gtggcgccgg cgcggcacgc aaaacgacgc gaggcccgga ctggccgggc ctcgcgtcgt
     1081 cgattcggtg gtgggcgata caaggatcga acttgtgact cctgccgtgt gaaggcagtg
     1141 ctctaccgct gagctaatcg cccgtcgaga gcgcgcaact atacgggccg tgcgcgtcgt
     1201 ggtcaaccgc gccgcggggg tgccgtagaa tgccgggttt cacgccagcc gatgcgcgcc
     1261 atgccccacg accttgccca gatcctgcaa gccctgcagc aattccacct cacgccatgg
     1321 aaactggtcg gctacaccgg catggcgttg ttcaccagcc gctggttcgt gcagctctac
     1381 tacacgcgca aatacaagcg cgtggtgatg ccgctggcgt tctggtggct gtcggtgctg
     1441 ggcagcgtgc tgctgctggc gtacttcacg gtcggcaaga acgattcggt cggcatcctg
     1501 tcgaacctgt tcccggtgtt cgtgtcggtc tacaacctcg cggtgcacct gcgccatcgc
     1561 cgggccgggg cggagattga gaagggagcg tagaggaccg gaaatgcgcg gcttcatgcc
     1621 ttgtggcgag ccacgcttcg cgttcccgat tcccgattac tccggctcgt agtcgagatt
     1681 cgccgacagc cagtgctcgg cctcggcgag cgtccagccc ttgcgcttgg cgtagtcggc
     1741 gacctgatcc ttgccgagcc ggccgaccac gaagtactgg ctggcggggt gcgagtagta
     1801 ccagcctgac acggcggccg ccggatacat cgagaagcct tcggtcagct cgatgccggc
     1861 gttcttcgtg gcgtccagca acttgaacag cgtggccttc tcggtgtggt cggggcaagc
     1921 cgggtagccc ggcgccgggc gtacgccgcg gtatctctcc gcgatgagtt cctcgttgtc
     1981 cagcgactcg tccggcgcat agccccagaa ctcgcggcgc acgcgctcat gcatgcgttc
     2041 ggcgaaggcc tcggccagcc ggtcggccag ggccttgagc aggatcgccg agtagtcgtc
     2101 cagttcggcg cggaagcgtt cgaggtgctt ctcgatgccg agtccggcgg tgaccgcgaa
     2161 gccgccgatc cagtccggct tgccgaacgc cttgggcgtg atgaaatccg ccaggcacag
     2221 gtcggggc
//
LOCUS       DASSVL010000133         2171 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_666654, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000133 DASSVL010000000
VERSION     DASSVL010000133.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2171)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2171)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2171
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_666654"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..177
                     /locus_tag="VFM52_02235"
     CDS             <1..177
                     /locus_tag="VFM52_02235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017461671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PfkB family carbohydrate kinase"
                     /protein_id="HET8764016.1"
                     /translation="DTTGAGDTFNGALAVFLHEGMAAAARKACAAAALSVTRLGAQGG
                     MPTARELDRFLAAH"
     gene            174..755
                     /gene="pnuC"
                     /locus_tag="VFM52_02240"
     CDS             174..755
                     /gene="pnuC"
                     /locus_tag="VFM52_02240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017461670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015663 - nicotinamide mononucleotide
                     transmembrane transporter activity [Evidence IEA];
                     GO_process: GO:0015890 - nicotinamide mononucleotide
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinamide riboside transporter PnuC"
                     /protein_id="HET8764017.1"
                     /translation="MSNRAVDAPEIIANLFAAASILLAGRNSIHVWWTGIVGCGVFAF
                     VFLDSRLYADSVLQIFFVAASVVGWWQWRHGNRGAALVVTDLPLRQLGAYLASGLVGA
                     LAYGWMLRAFTNAYSPFLDSTVLAFSIVAQLLMMRRHVQNWPFWLLVNTIAVPLYASR
                     HLYLTSALYAAYWVNALVAWRHWRRLRDAPATG"
     gene            complement(756..2099)
                     /gene="mnmE"
                     /locus_tag="VFM52_02245"
     CDS             complement(756..2099)
                     /gene="mnmE"
                     /locus_tag="VFM52_02245"
                     /EC_number="3.6.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019580343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis GTPase MnmE"
                     /protein_id="HET8764018.1"
                     /translation="MSEPSETIAAIATAPGAAGVGVVRVSGPAVPAIARTLLGRDPQP
                     RHAHFAAFRAADGELIDHGLLLHFPAPASYTGEHVLELQGHGSAVLLDALLRRVCELG
                     ARLARPGEFTERAFLNGKLDLAQAEAVADLVAARSQAGARAALRSMEGVFSRRVEALL
                     QKLIALRVHIEAAIDFPEEEIDFLADPAIAGKLAALREELAELLREARRGVRLTDGLR
                     VAIVGRPNAGKSSLLNALAGRDRAIVTPVAGTTRDVLREAIALDGIALELADTAGLRA
                     TDDVIEAEGVRRAQAELASADAALLVTDAAHADADRAFFDALPEGATRLVLVNKIDLD
                     GSAPHAETRAGEHWLWASAKTGAGLDAVRATLRELAGASGAEGAFSARRRHVLALETV
                     AAHLDRTDAALTTAHAGELAAEDLREAQHALGEITGAYTSDDLLGAIFSSFCIGK"
BASE COUNT          271 a          758 c          813 g          329 t
ORIGIN      
        1 gacaccaccg gcgccggcga taccttcaat ggcgcgctcg ccgtgttcct gcatgaaggc
       61 atggccgccg ccgcccgcaa ggcctgcgcg gcggccgcgc tgtcggtgac caggctcggc
      121 gcgcagggcg gcatgccaac cgcgcgcgag ctggaccgct tcctcgccgc gcattgagca
      181 accgcgccgt ggatgcgccg gagatcatcg ccaacctgtt tgccgccgcc tcgatcctgc
      241 tggccgggcg caacagcatc cacgtgtggt ggaccggcat cgtcggctgc ggcgtgttcg
      301 cgttcgtgtt cctcgacagc cggctgtatg ccgacagcgt gctgcagatc ttcttcgttg
      361 ccgccagcgt cgtcggctgg tggcaatggc gccacggcaa ccgcggcgcg gcgctcgtcg
      421 tcaccgacct gccgctgcgc cagcttggcg cctacctcgc cagcggcctc gtcggcgcgc
      481 tcgcctacgg ctggatgctg cgcgccttca ccaacgccta ctcgcccttc ctcgactcca
      541 ccgtgctcgc cttcagcatc gtcgcgcagc tattgatgat gcgccggcac gtgcagaact
      601 ggccgttctg gctgctggtc aacaccatcg ccgtgccgct ctacgccagc cgccacctct
      661 acctcacctc ggcgctgtac gcggcgtact gggtgaatgc gctggtcgcg tggcggcact
      721 ggcggcgact gcgcgacgcc ccggccaccg gctgatcact tgccgatgca gaagctcgaa
      781 aagatcgcgc cgaggagatc atcgctggtg taggcgccgg tgatttcgcc gagcgcgtgc
      841 tgggcttcgc gcaggtcctc ggcggcgagt tcgccggcgt gggcggtggt gagcgcggcg
      901 tcggtgcgat cgaggtgcgc ggcgacggtt tccagtgcaa gcacgtggcg gcggcgggcg
      961 ctgaaggcac cttcggcgcc gctggcgccg gcgagttcgc gcagtgtggc gcgcacggcg
     1021 tcgaggccgg cgccggtttt cgcggaggcc cacagccagt gctcgccggc gcgggtttcc
     1081 gcatgcgggg cgctgccgtc gaggtcgatt ttgttgacca gcacgaggcg cgtggcgcct
     1141 tcgggcaggg cgtcgaagaa ggcgcgatcc gcgtcggcgt gcgccgcgtc ggtgaccagc
     1201 agcgcggcgt cggcgctggc cagctcggcc tgcgcgcggc gcacgccttc ggcttcgatc
     1261 acatcgtcgg tggcgcgcag gccggcggtg tcggcgagtt cgagcgcgat gccgtcgagc
     1321 gcgatggcct cgcgcagcac gtcgcgggtg gtgccggcca ccggggtgac gatggcgcgg
     1381 tcgcgcccgg ccagcgcgtt gagcaggctc gacttgccgg cgttcgggcg gccgacgatg
     1441 gccaccctga ggccgtcggt gaggcgcacg ccgcgccgcg cctcgcgcag cagctcggcc
     1501 agttcctcac gcagcgcggc gagcttgccg gcaatggccg ggtcggcgag gaaatcgatt
     1561 tcttcctccg ggaaatcgat cgccgcctcg atgtgcacgc gcagggcgat aagtttttgc
     1621 agcaacgcct cgacgcggcg cgagaacacg ccttccatcg agcgcagcgc ggcgcgcgcg
     1681 ccggcttgcg aacgggcggc gacgagatcg gcgacggctt cggcctgggc gaggtcgagc
     1741 ttgccgttga ggaacgcccg ctcggtgaat tccccgggcc gcgccagccg cgcgccgagc
     1801 tcgcacacgc ggcgcagcag cgcgtcgagc agcacggcgc tgccgtggcc ctgcagttcc
     1861 agcacgtgct cgccggtgta ggaggcgggc gcggggaaat gcagcagcag gccgtggtcg
     1921 atcagctcgc catcggcggc gcgaaacgcc gcgaagtgcg cgtggcgcgg ctgcggatcg
     1981 cggccgagca gggtgcgtgc gatcgccggc acggccgggc ccgaaacgcg caccacgccg
     2041 acgccggcgg cgcccggtgc ggtcgcgatc gcggcaatgg tttcgctggg ctcgctcatg
     2101 cggggcaggg tagacgcaaa cggccgcggc ggttgcccgg cgcggccgtt tgcgtcatgc
     2161 gacgcgggcg g
//
LOCUS       DASSVL010000134         6203 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1203660,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000134 DASSVL010000000
VERSION     DASSVL010000134.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 6203)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6203)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6203
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1203660"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1094
                     /locus_tag="VFM52_02250"
     CDS             <1..1094
                     /locus_tag="VFM52_02250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014402700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HET8764019.1"
                     /translation="IASVERAAALIRAARRPLVMLGAAASRPASSEALSRFVLRAGIP
                     FFTTQMGKGSVAGGSGLYMGTAALSERDYVHGAIDRADVIITIGHDTIEKPPFVMRPG
                     GPTVIHVGCQPASVEQVYFPQAEIIGDMGRSLALLADRIEGQVPNAKALLPLREGILA
                     HLADRAGEDRFTPQRIVRDVRAVMPSDGVVALDNGMYKIWFARNYRTQVANTLLLDNA
                     LATMGAGLPSAMMASMLYPDRRVLAVCGDGGFMMNDQELETAVRLKLNLVVLILQDNA
                     YGMIRWKQAVDGFADYGLSFGNPDFALYARAFGCQGHRVDDIAQFVPTLEAAFQAGGV
                     HLVSVPIDYSENERVLVNELREAFPPRLS"
     gene            complement(1147..1680)
                     /locus_tag="VFM52_02255"
     CDS             complement(1147..1680)
                     /locus_tag="VFM52_02255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8764020.1"
                     /translation="MSVVALVRPLALSLLLALAGTTIAAAQQAPSLATRMGDAEFHRA
                     GLDQLSPQQLKALESWLAEHGAELVPPRPLAAERSATVAADRASHRGVPPAAAKARPA
                     REVIHSTLAGNFRGWQPGTVLVLANGQRWRVADDSVLDTGRPLTDPAVTIKPGLVGGW
                     LLKVEGYNTSARVQPAN"
     gene            1764..3902
                     /locus_tag="VFM52_02260"
     CDS             1764..3902
                     /locus_tag="VFM52_02260"
                     /EC_number="2.7.6.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008210490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0015970 - guanosine tetraphosphate
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional (p)ppGpp
                     synthetase/guanosine-3',5'-bis(diphosphate)
                     3'-pyrophosphohydrolase"
                     /protein_id="HET8764021.1"
                     /translation="MVQRSSPIADPQADWHHRAHASSALAAALDALKARDGSDAACRD
                     VLDLLTALGCDAPTMASAVWFELAVRDDALWKTHAAKLPEELRRLVDGQLAAETVWAL
                     HAQRAPGGAAEGLRRLLLAIIRDLRVVFVLLARQLVRLRAAATAPEAERLALARLTRD
                     IHAPLANRLGIWQLKWELEDLAFRYLQPDVYKRIAKLLDERRTDRETFIAESLAELHR
                     ALEAAGIHADLAGRPKHIYSIWKKMQKKGLAFSELYDIRAVRILVATVADCYAALGVV
                     HTLWPHLPREFDDYLARPKGNGYRSLHTAVIGPHHKTLEVQIRTYDMHRANELGVAAH
                     WRYKEGGTGDAEFEAKIAWMRRLLDARGEDDGALAADLKTELIEDRVYLLTPQGEVMD
                     LPHGATVLDFAYHVHTEVGHRCRGAKVNGRIVPLTFQPQSGDRVEILTTKIAEPSRDW
                     LSPHHGYLNSARARDKVRAWFRKQAHDANLGVGRALFERELKRLGLPETDLAELPKHF
                     RLQTQEELLVALALGEITGGQVARVLQELTQPAVAAPPVVPAVPRPATRDPGALTIEG
                     IGNLLTTLAHCCQPLPGDPVRGYITRGRGVSVHRADCASLVRLARREPDRVIDVNWGT
                     PSAQAYEVAIELRGYDRKGLQKDVTGVISNAATPIIASSTRAIAASGEVEMRFTLRVR
                     DFEQLSTLLDRLLALPNVVEAHRTGAGLRA"
     gene            4032..5744
                     /locus_tag="VFM52_02265"
     CDS             4032..5744
                     /locus_tag="VFM52_02265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019466379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HET8764022.1"
                     /translation="MTERRRDPHEPKAHERAEPTLGNLDQLDTDVDTPPREPRATRDE
                     PPARRPPRAPRPRRRWLLPALVVALLVVIGGMWVEQNRLRSLLPRTELNDVLGRAQQA
                     LAAGHLDGTDGTSARELFQAAIALEPDNDAARNGLHQVGVAELAQADAAVQAGQLDIA
                     TQKAAVARELLGGGSDVDRLDQMIAAQRNSQVRISTLVQQAQQAVAAGQYGGPDGAGA
                     LYQRVLQASPGNAVASHGLDQVAAALAAQAQQALAAGDTATADAAIEQISSLQPNNAA
                     LPGLRAARAQAGQQDNAALDAMLQQGDAALRAGRIDGPGEDTALTHYKAALALSPGNP
                     QAESGLGKVALALTVQANAAMDAGDYTQAASLLDRAAPLAPKSAEVAEARARLQGHHQ
                     APPAPPAKTGAQGLATVTTDNADDTVQPPLSAADSAKLAGLLQRAQAAVARGDIMMPP
                     GNCAYDLYRNALAIDGNNVTARQGLQALPQVVQQRFERDLASGNLASADAMLDNLHDL
                     APGDTNLAARRQRLGSAWLDQAQQQLAQGNRSGAAQALDHARRLTPSDPRVQQITTRL
                     QTGT"
     gene            5751..>6203
                     /locus_tag="VFM52_02270"
     CDS             5751..>6203
                     /locus_tag="VFM52_02270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007082626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8764023.1"
                     /translation="MSILVFGASSQIGHFLLPRLRHHGMAIYAVSRHAHVPGDGIRWL
                     RGQLPDAVPDLSSTPSAVISFGPIGPFAAWLATTAFSAPPRVIATSSMSAETKRSSAV
                     PAERALSQQLRTGEHAIADACARLGAPWTIFRPTLVYGAGLDRSLTPIA"
BASE COUNT          925 a         2391 c         2097 g          790 t
ORIGIN      
        1 gcatcgcgtc ggtggaacgc gccgccgcgc tgatccgcgc cgcccggcgg ccgctggtga
       61 tgctgggcgc ggcggcctcg cgcccggcgt ccagcgaggc gctgtcgcgc ttcgtgctgc
      121 gcgccggcat cccgttcttc accacgcaga tgggcaaggg ctcggtcgcc ggcggctccg
      181 ggctgtacat gggcacggcg gcgctgagcg agcgcgacta cgtgcacggg gcgatcgacc
      241 gtgccgacgt catcatcacc atcggccacg acaccatcga gaaaccgccc ttcgtgatgc
      301 gccccggcgg tcccaccgtg atccacgtcg gctgccagcc ggcgagcgtg gagcaggtgt
      361 acttcccgca ggcggagatc atcggtgaca tgggccgctc gctggcgctg ctggccgacc
      421 gcatcgaggg ccaggtgccc aacgccaagg cgctgctgcc gctgcgcgag ggcatcctcg
      481 cccaccttgc cgaccgcgcc ggcgaggacc gcttcacgcc gcagcgcatc gtgcgcgacg
      541 tgcgcgcggt gatgccgtcc gacggcgtcg tggcgctgga caacggcatg tacaagatct
      601 ggttcgcgcg caactaccgc acccaggtcg ccaacaccct gctgctggac aacgcgctgg
      661 ccaccatggg cgccggcctg ccctcggcga tgatggcttc gatgctgtac ccggatcgcc
      721 gcgtgctggc ggtgtgcggc gacggcggct tcatgatgaa cgaccaggag ctggagacgg
      781 cggtacgcct caagctcaac ctggtggtgc tgatcctgca ggacaacgcc tacggcatga
      841 tccgctggaa gcaggcggtg gacggcttcg ccgactacgg cttgagcttc ggcaaccccg
      901 acttcgcgct gtatgcgcgc gcgttcggct gccaggggca tcgcgtcgac gacatcgcgc
      961 agttcgtgcc cacgctggaa gccgccttcc aggccggcgg cgtacacctg gtgtcggtgc
     1021 cgatcgacta ctcggagaac gagcgcgtac tggtgaacga gttgcgcgag gcgttcccgc
     1081 cccgcttgtc ctgagttccc gcatccgcgg cgagaccgcc gcgcgtcgtg cgcggttgcc
     1141 gcaacctcag tttgccggct gcacccgcgc cgaggtgttg tagccctcga ccttgagcag
     1201 ccagccaccg accaggccgg gcttgatggt gactgccggg tcggtcagcg gcctgccggt
     1261 atcgagcacg ctgtcgtcgg ccacgcgcca gcgctggcca ttcgccagca ccagcaccgt
     1321 gcccggctgc cagccgcgga aattgccggc cagcgtgctg tggatcacct cgcgggccgg
     1381 cctggccttg gcggccgccg gcggtacgcc gcgatggctg gcccgatcgg cggccaccgt
     1441 ggccgagcgt tccgccgcca gcggccgcgg cggcaccagc tcggcgccgt gctcggccag
     1501 ccagctttcc agcgccttga gctgctgcgg gctcaactgg tcgaggccgg cacggtggaa
     1561 ctcggcgtcg cccatgcgcg tggcgagcga cggcgcctgc tgcgcagcag cgatggtggt
     1621 gcccgcgagg gccagcaaca gggacaacgc cagcgggcga accagggcga cgacggacat
     1681 gacgggctcc atgaccatgc tggatgggac ccgcattgtg cccgtgcaca aggcgttccg
     1741 accagccgcc ttacaatgcc ggcatggtcc agcgctcgtc ccccattgcc gacccgcagg
     1801 ctgattggca tcaccgcgcg cacgcgtcgt cggcgctcgc cgcggcgctc gacgccctca
     1861 aggcgcgcga cggcagcgac gccgcctgcc gcgacgtgct cgacctgttg accgcgctgg
     1921 gctgcgacgc gccgaccatg gcctcggcgg tgtggttcga gctggcggtg cgcgacgacg
     1981 cgctgtggaa gacgcacgcc gccaagctgc cggaggaact gcggcgcctc gtcgatggcc
     2041 agcttgcggc ggaaacggtc tgggcgctgc acgcgcagcg cgccccgggc ggcgccgccg
     2101 aaggcctgcg ccggctgctg ctggcgatca tccgcgacct gcgcgtggtg ttcgtgctgc
     2161 tcgcgcgcca gctggtgcgc ctgcgcgccg ccgcgaccgc gcccgaggcc gagcgcctcg
     2221 cgctggcgcg gctcacccgt gacatccacg cgccgctcgc caaccggctc ggcatctggc
     2281 agctcaagtg ggagctggaa gacctcgcct tccgctacct gcagccggac gtctacaagc
     2341 gcatcgccaa gctgctcgac gaacggcgca ccgatcgcga gacgttcatc gccgaatcgc
     2401 tggccgagct gcaccgcgcg ctcgaggccg ccggcatcca cgccgacctc gccggccggc
     2461 ccaagcacat ctattccatc tggaaaaaga tgcagaagaa ggggctggcg ttctccgagc
     2521 tgtacgacat ccgcgcggtg cgcatcctgg tcgccaccgt ggccgactgc tacgccgcgc
     2581 tcggcgtggt gcacaccttg tggccgcatc tgccgcgcga gttcgacgac tatctcgccc
     2641 gccccaaggg caacggctac cgctcgctgc acaccgcggt gatcgggccg caccacaaga
     2701 cgctggaagt gcagatccgc acgtacgaca tgcaccgcgc aaacgagctc ggcgtggccg
     2761 cgcactggcg ctacaaggag ggcggcaccg gcgacgccga gttcgaggcg aagatcgcgt
     2821 ggatgcgccg cctgctcgac gcgcgcggcg aggacgacgg tgcgctcgcc gccgacctca
     2881 agaccgagct gatcgaggac cgggtctacc tgctcacccc ccagggcgag gtgatggacc
     2941 tgccgcacgg cgccaccgtg ctggatttcg cctaccacgt gcataccgag gtcggccacc
     3001 gctgccgcgg cgccaaggtc aacggccgca tcgtgccgct caccttccag ccgcaaagcg
     3061 gcgaccgggt ggaaatcctc acgacgaaga ttgccgaacc cagccgcgac tggctgtcgc
     3121 cacaccacgg ctacctcaac agcgcgcgcg cccgcgacaa ggtgcgcgcc tggttccgca
     3181 agcaggcgca cgacgccaac ctcggcgtcg gccgcgcgct gttcgagcgc gagctgaaac
     3241 gcctcggcct gccggaaacc gacctcgccg agctgccgaa acacttccgc ctgcagaccc
     3301 aggaagagct gctggtggcc ctggcactgg gcgaaatcac cggcggccag gttgcgcgcg
     3361 tgctgcagga gctcacccag ccggcggtcg ccgcgccgcc cgtggtgccg gccgtgccgc
     3421 gcccggccac ccgcgacccc ggtgcgctca ccatcgaggg catcggcaat ctgctgacca
     3481 cgctggcgca ttgctgccag ccgctgccgg gcgacccggt gcgcggctac atcacccgcg
     3541 gccgtggggt gtcggtgcac cgcgccgact gcgccagcct cgtccggctg gcgcggcgcg
     3601 agcccgaccg cgtcatcgac gtcaactggg gcacgcccag cgcccaggcc tacgaggtgg
     3661 cgatcgagct gcgcggctac gaccgcaagg gcctgcagaa agacgtcacc ggcgtcatca
     3721 gcaacgccgc cacgccgatc atcgcctcgt cgacccgcgc catcgccgcc agcggcgagg
     3781 tcgagatgcg cttcaccctg cgcgtgcgcg atttcgagca gctctccacc ctgctcgacc
     3841 gcctgctggc cctgcccaac gtggtcgagg cccatcgcac cggcgccggg ttgcgagcgt
     3901 agcggcgaca cccgtccagc ggcgtcgcac cacggcacca gcgcgcacac tgaacgcccg
     3961 ccgcgggctt tcgcggcgcc gcatcatggc gatgctaagc tcgtgcgcgc actgccgctg
     4021 ccctcctttc catgaccgaa cgccgccgcg atccgcacga acccaaagcg cacgaacgtg
     4081 ccgaaccgac gctgggcaac ctcgaccagc tcgacaccga cgtcgacacg ccgccacgcg
     4141 aaccgcgggc cacgcgcgac gagccaccgg cacgccgccc gccgcgtgcg ccgcggcccc
     4201 ggcgccgctg gctgttgccg gcgctggtcg tcgccttgct ggtcgtcatc ggcggcatgt
     4261 gggtcgaaca gaaccgcctg cgcagcctgc tgccgcgcac cgaactcaac gacgtgcttg
     4321 gccgcgccca gcaggcgctg gccgccgggc acctggacgg caccgacggc accagcgcgc
     4381 gcgagctgtt ccaggcggcg atcgcgctcg agccggacaa cgacgccgcg cgcaacggcc
     4441 tgcaccaggt cggcgtggcc gagctggccc aggccgatgc ggcggtgcag gccggccagc
     4501 tcgacatcgc cacgcaaaag gccgcggtgg cgcgcgagct gctgggcggc ggcagcgacg
     4561 tcgaccgcct ggaccagatg atcgccgccc agcgcaactc gcaggtgcgc atctccaccc
     4621 tggtgcagca ggcgcagcag gccgtggcgg ccggccagta cggcggcccg gacggcgccg
     4681 gcgcgctcta ccagcgcgtg ctgcaggcct cgcccggcaa cgccgtcgcc agccacgggc
     4741 tggaccaggt cgccgcggcg ctcgcggccc aggcgcagca ggcgctggct gccggcgaca
     4801 ccgccaccgc cgatgccgcg atcgaacaga tctcgtcgct gcaacccaac aacgccgcgc
     4861 tgcccggctt gcgggcagcc cgtgcccagg ccggccagca ggacaacgcc gcgctcgacg
     4921 ccatgctgca acagggcgat gccgcgctgc gcgccggacg catcgacggt cccggcgagg
     4981 acaccgcgct gacccattac aaggcggcgc tcgccctcag tcccggcaac ccgcaggccg
     5041 aatccggcct gggcaaggtg gcgctggcgc tcaccgtgca ggccaacgcg gcgatggacg
     5101 ccggcgacta cacccaggcc gcttcgctgc tggatcgtgc cgcgcccctg gcgccgaaat
     5161 cggccgaggt ggccgaggcg cgcgcacgcc tgcagggcca ccaccaggcc ccgccggcac
     5221 caccggcgaa aaccggtgcg caaggcctgg cgaccgtcac caccgacaac gccgacgaca
     5281 ccgtgcagcc cccgctcagc gccgccgaca gcgccaagct cgcgggcctg ctgcagcgcg
     5341 cgcaggccgc ggtggcgcgc ggcgacatca tgatgccgcc cggcaactgc gcctacgacc
     5401 tgtaccgcaa cgcgctcgcc atcgacggca acaacgtcac cgcgcggcaa ggcctgcaag
     5461 cgctgccgca agtcgtgcag cagcgcttcg agcgcgatct cgccagcggc aacctcgcca
     5521 gcgccgacgc catgctcgac aacctgcacg atctcgcgcc cggtgacacg aacctcgccg
     5581 cccgacgcca gcgcctgggc agcgcgtggc tcgatcaggc ccagcagcag ctcgcgcagg
     5641 gcaaccgcag cggcgccgcg caggcgctcg accatgcgcg ccggctgacc ccgtctgacc
     5701 cccgcgtgca gcagatcacc acgcgcctgc aaaccggcac ctgagccggc atgagcatcc
     5761 tggtattcgg cgccagcagc cagatcggcc atttcctgct gccccgcctg cgccatcacg
     5821 gcatggcgat ctacgccgtc agccgccacg cccacgtgcc gggcgacggc atccgctggt
     5881 tgcgcggcca gttgcccgac gcggtgcccg acctgtcttc gacgccgtcg gcggtcatca
     5941 gcttcggccc gatcggcccg tttgccgcgt ggctcgccac gacggcgttc agcgccccgc
     6001 cgcgggtcat cgccaccagc tcaatgagcg cggaaaccaa gcgcagctct gcggtgcccg
     6061 ccgaacgcgc gctgtcgcag caactgcgca ccggcgaaca cgccatcgcc gacgcgtgcg
     6121 cccgccttgg cgcgccgtgg acgatcttcc gccctaccct ggtctacggc gccggcctgg
     6181 accggagcct caccccgatc gcc
//
LOCUS       DASSVL010000135         3665 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_949315, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000135 DASSVL010000000
VERSION     DASSVL010000135.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3665)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3665)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3665
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_949315"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..388)
                     /locus_tag="VFM52_02275"
     CDS             complement(<1..388)
                     /locus_tag="VFM52_02275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008215536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-acyl-sn-glycerol-3-phosphate acyltransferase"
                     /protein_id="HET8764024.1"
                     /translation="MDTATTHQIVRDYLRPLRYLWRVPLLLVHIVLAILLAGLVMSWN
                     QHRVMRDGREPLPHRMIRWWATGLLRIFGLRSVRVGQPLVDPVLFVANHTSWIDIVLL
                     HSQRAVCFVAKAEIAGWPLVGWLARGG"
     gene            complement(401..895)
                     /locus_tag="VFM52_02280"
     CDS             complement(401..895)
                     /locus_tag="VFM52_02280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019466502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC family transcriptional regulator"
                     /protein_id="HET8764025.1"
                     /translation="MTPLDRTDLRLLAVLQTQGRITNAELAERVNLSPSACLRRLQRL
                     ETDGVIAGYAARIEPQAVGLGLQAFVRVQLVKHEAAVIERFVDRVNGWDEVVACHALT
                     GDMDYLLHVYVADLADFSRFLLDHLLNAAGVADVNSSFVLRTVKRSPALPLSRAQHVA
                     GGSR"
     gene            1024..1917
                     /gene="phhA"
                     /locus_tag="VFM52_02285"
     CDS             1024..1917
                     /gene="phhA"
                     /locus_tag="VFM52_02285"
                     /EC_number="1.14.16.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008215540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004505 - phenylalanine 4-monooxygenase
                     activity [Evidence IEA];
                     GO_process: GO:0006559 - L-phenylalanine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine 4-monooxygenase"
                     /protein_id="HET8764026.1"
                     /translation="MNAATPRKIEHQQTDRGYIPVYATGVVEQPWANYTRTDHEVWDT
                     LFKRQRELLPERACAEFLDGVQRFGLGNGGIPKFDDITRLLRRTTGWELVAVEGLLPD
                     EVFFDHLAHRRFPVSWWIRKPEQLDYLSEPDLFHDLFGHVPLLLNPVFADYMQAYGQG
                     GMKAFAIGPEALMNLTRLYWYTVEFGLINTNQGMRIYGAGILSSKGESIYSLDAAAPN
                     RIGFELERVMSTRYRIDTYQQTYFVIDDFAQLFEATRPDFTPIYARLKAAPAHAAADV
                     LDGDRVFHRGTREGFATNADT"
     gene            complement(1951..>3665)
                     /locus_tag="VFM52_02290"
     CDS             complement(1951..>3665)
                     /locus_tag="VFM52_02290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019466495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF885 family protein"
                     /protein_id="HET8764027.1"
                     /translation="TAAPATAEGSADAQFKRIYTTEWAWRSGHPGTADAGADSGRLDD
                     VGAASQQRRLDYWQRVMKQLDAIDVAQLSPGNRVNFEVYHAQIGNLLADQKFKAWQMP
                     FNSDSAFWSDIGYELGGDRLRSVDDYRKYLDRLDQIPAYFDQQIANMRLGLKRGFSVP
                     REVLKGRDRSIAAVAELNDPTAASFYAPFKQMSATIPADQQQALRGEAQQRIRDAVIP
                     AYARLLKFFDDDYVPHARTTLAAEALPDGKAYYRQQIREYTTLDLTPDQIHQIGLDQV
                     AKSHARMLEVMRQSGFKGGFAEFLRYLRTDPRFYAKTPQELLDKTAWVAKEVDGKVGR
                     FFGHLPRERFAIEPVPAAIAPYYTSGRGGPDVYLVNTYDLPSRALYNMPALTLHESYP
                     GHALQLELAEEDHDQPAFRRDGYISAYGEGWGLYAEYLGNEMGIYQTPWQQFGYLTYQ
                     MWRACRLVVDTGIHHLGWTRQQAIDYLTDHTALSPLEIANEVDRYISWPGQADSYELG
                     YLKILELRAKAEKALGEKFDIRAFHDTVLSTGSVPLPVLEARIDRFIKAGGPEPDYGH
                     PRQP"
BASE COUNT          572 a         1256 c         1242 g          595 t
ORIGIN      
        1 cgccgcccct ggccagccag cccaccagcg gccagccggc gatctcggcc ttggccacga
       61 agcacaccgc gcgctgcgaa tgcagcagca cgatgtcgat ccacgaggtg tggttggcca
      121 cgaacagcac cgggtcgacc agcggctggc ccacgcgcac cgagcgcaag ccgaagatgc
      181 gcagcaggcc ggtggcccac cagcggatca tccggtgcgg cagcggctcg cggccgtccc
      241 gcatcacgcg gtgctggttc cagctcatca ccaggccggc cagcaggatg gccagcacga
      301 tgtggacgag cagcagcggc acgcgccaga ggtagcgcag cggccgcagg tagtcccgga
      361 cgatctggtg ggtggtggcg gtatccatcg gccgcctagt ctagcggctg ccgcccgcaa
      421 catgctgcgc ccgcgacagc ggcagcgcgg gcgatcgctt caccgtgcgc agcacgaagc
      481 tggagttgac gtcggccacg ccggcggcgt tcagcaggtg gtcgagcagg aagcgcgaga
      541 agtcggcgag gtcggccacg tagacgtgca ggaggtaatc catgtcgccg gtgagcgcgt
      601 ggcaggccac cacctcgtcc cagccgttga cgcggtcaac gaagcgctcg atcaccgccg
      661 cctcgtgctt caccagctgc acgcgcacga aggcctgcag ccccaggccc accgcctgcg
      721 gctcgatccg cgcggcatag cccgcgatca cgccgtccgt ctccagccgc tgcaggcggc
      781 gcaggcaggc cgagggcgac aggttcaccc gttcggccaa ctcggcattg gtgatgcggc
      841 cttgggtctg cagcaccgcg agcaggcgca ggtcggtgcg atccagcggg gtcatgcacg
      901 aaacctcgaa cattggttgt ttcagcacaa ttatattgcg taaatgcccg ccatgcatgc
      961 aagcaaacaa tcttcgtgcg cttgcttgcg cctatgctgg cacggtcacc cccggagtcc
     1021 gccatgaacg ccgccacgcc ccgcaagatc gagcaccagc agaccgaccg cggctacatc
     1081 ccggtctacg ccaccggcgt ggtggagcaa ccctgggcga actacacccg caccgaccac
     1141 gaggtgtggg acaccctgtt caagcgccag cgcgagctgc tgcccgagcg cgcctgcgcg
     1201 gaattcctcg acggcgtgca gcgcttcggc ctcggcaacg gcggcatccc gaaattcgac
     1261 gacatcaccc gcctgctgcg ccggaccacc ggctgggagc tggtggcggt ggagggcctg
     1321 ctgccggacg aggtgttctt cgaccacctc gcccaccgcc gcttcccggt gagctggtgg
     1381 atccgcaagc ccgagcagct cgactacctc tccgagcccg acctgttcca cgacctgttc
     1441 ggccacgtgc cgctgctgct gaacccggtg ttcgccgact acatgcaggc ctacggccag
     1501 ggcggcatga aggccttcgc catcggcccc gaggcgctga tgaacctcac ccgcctgtac
     1561 tggtacacgg tggagttcgg tctcatcaac acgaatcagg gcatgcgcat ctacggcgcc
     1621 ggcatcctga gttccaaggg cgagtcgatc tacagcctgg acgcggccgc gcccaaccgc
     1681 atcggtttcg agctggagcg cgtgatgagc acgcgctacc gcatcgacac ttaccagcag
     1741 acctatttcg tgatcgacga cttcgcgcag ctgttcgagg ccacccgccc cgatttcacg
     1801 ccgatctacg ccaggctcaa ggccgccccc gcccatgccg ccgccgacgt gctggatggc
     1861 gaccgcgtgt tccatcgcgg cacgcgcgaa gggtttgcca ccaacgcgga tacctgagcc
     1921 ggcgccccgc ccgccgcgcc ggccgtggcg tcacggctgc cgcggatggc cgtaatccgg
     1981 ctccggcccg cccgccttga tgaaccggtc gatgcgcgct tccagcaccg gcagcggcac
     2041 cgagccggtg gagagcacgg tgtcgtggaa ggcgcggatg tcgaacttct cgcccagcgc
     2101 cttctctgcc ttggcgcgca gttcgaggat cttgaggtag ccgagctcat agctgtcggc
     2161 ctggccgggc cagctgatgt agcggtccac ctcgttggcg atctccagcg gactcagcgc
     2221 ggtgtggtcg gtgaggtagt cgatcgcctg ctggcgcgtc cagccgaggt ggtggatgcc
     2281 ggtgtcgacc accagccggc aggcacgcca catctggtag gtgaggtagc cgaactgctg
     2341 ccagggggtc tggtagatgc ccatttcgtt gccgaggtat tcggcgtaca gcccccagcc
     2401 ttcgccgtag gcggagatgt agccgtcgcg acggaacgcc ggctggtcat ggtcttcttc
     2461 ggccagttcc agctgcagcg cgtggccggg gtagctttcg tgcagggtga gcgcgggcat
     2521 gttgtagagc gcgcgcgacg gcaggtcgta ggtgttgacc aggtacacgt ccgggccgcc
     2581 gcggccggag gtgtagtacg gcgcgatcgc cgccggcacc ggctcgatgg cgaagcgctc
     2641 ccgcggcaaa tggccgaaga acctgcccac cttgccgtcc acttccttgg ccacccaggc
     2701 ggtcttgtcc agcagctcct gcggcgtttt cgcgtagaag cgcgggtcgg tgcgcaggta
     2761 gcgcaggaac tcggcgaagc cgcccttgaa gccgctctgc cgcatcacct cgagcatccg
     2821 cgcgtggctt ttcgccacct ggtccaggcc gatctggtgg atctggtcgg gcgtgaggtc
     2881 cagcgtggtg tattcgcgga tctgctggcg gtaataggcc ttgccgtcgg gcagcgcctc
     2941 ggcggccagc gtggtgcgcg catgcggcac gtagtcgtcg tcgaagaact tgagcagcct
     3001 ggcgtaggcg ggaatcaccg cgtcgcggat gcgctgctgc gcctcgccgc gcaacgcctg
     3061 ctgctggtcg gcggggatcg tggcggacat ctgcttgaac ggcgcgtaga aactagccgc
     3121 cgtgggatcg ttgagctccg ccaccgcggc gatcgagcgg tcgcggccct tgagcacttc
     3181 gcgcggcacg ctgaagccgc gtttcaggcc gaggcgcatg ttggcgatct gctggtcgaa
     3241 ataggccggg atctggtcca gccggtcgag gtacttgcgg tagtcgtcga cactgcgcag
     3301 gcggtcgccg ccgagctcgt agccgatgtc cgaccagaac gcggagtcgc tgttgaacgg
     3361 catctgccag gccttgaact tctggtcggc cagcaggttg ccgatctgcg cgtggtagac
     3421 ctcgaagttg acccgattgc ccggcgaaag ctgcgccacg tcgatcgcgt cgagctgctt
     3481 catcacgcgc tgccagtaat ccagccgccg ctgctggctg gccgcgccga cgtcgtcgag
     3541 ccggccgctg tcggccccgg catccgccgt gccgggatgg ccgctgcgcc atgcccactc
     3601 ggtggtgtag atgcgcttga actgcgcatc agcgctgccc tcggcggtcg ccggggccgc
     3661 ggtcg
//
LOCUS       DASSVL010000136         3683 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_878697, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000136 DASSVL010000000
VERSION     DASSVL010000136.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3683)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3683)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3683
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_878697"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1840
                     /locus_tag="VFM52_02295"
     CDS             <1..1840
                     /locus_tag="VFM52_02295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007507041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HET8764028.1"
                     /translation="LDSLVNAAGEASIYRARLEQQVGNFRFNLVELDQTVARLRDQLR
                     KLEIETETQILSRYQRENEAGEGTAFDPLELDRFSNLQQYSRALAESVSDLASIQDIL
                     DDQTRQSETLLLQQSRVNSDLQDGLMRTRMVPFESLVPNLRRTLRGAADELGKRAQLR
                     VEGAQGEMDRSVLERMKAPFEHMLRNALTHGIEDPAERVARGKPMEGTVTIEVGRQGT
                     EVLVRVSDDGAGFDRDAIRAKAIQRGLLKPDAPIPDAELYNFVLQTGFSTASKVSQLA
                     GRGVGMDVVANEIRQLGGSLAIESERGRGTTFNIRLPFTLAVTQAITVRAGDATFAVP
                     MTSVQAVSRIRRQDMAAHLASGERSITYAGEAYALHDLSQLLGFGAASIPEDGTGQLP
                     LLMVHAGDLRAAVRIDSVIGSREIVVKPVGPQVSNVPGMFGATILGDGSVMLILDLAP
                     LVRHFDAQQAAAEAATTAAEVTIAPQVPEVAPRVRREGPRLVMVVDDSITMRKVTARV
                     LEREQLEVVTAKDGVDALEKLQERVPDVMLLDIEMPRMDGFELATHMKNDSRFRHVPI
                     IMITSRTGEKHRQRAFEIGVDRYLGKPYSESDLLHNVSELLEAPHA"
     gene            1929..3026
                     /locus_tag="VFM52_02300"
     CDS             1929..3026
                     /locus_tag="VFM52_02300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8764029.1"
                     /translation="MQIVYATSAAEFDAARLAESCATAALLNLDSCEWLDAVETRLHA
                     AGVAVVYNDPEISRALQGWEQARWLRHLTAKLSGSTDFDPPRPVSVEPARVVEAPALA
                     TGDTQPVDVAAEPAPLPADAEPFAAVPATVVEQPLSPAEIASMTVNFSATPEPAQVPA
                     DPLQVADADVSAATGAEPAGAVAAPDADVPAAGLDGDGALDVDTEALSALIDARLAEA
                     EDHASGEAPQVWRVAHGGAVSAVELSPAAEPEMDKSAHAAPDADATAQVLPMDDSELM
                     QGLPAIDDWQLVDRDAPLAPAAPGEQKPRGEPEISIDFAGLELVPIEPVAQAEIQAEP
                     AGRWMHAGNGDAHAAGKRKQPAAPGAAGGHA"
     gene            3023..3502
                     /locus_tag="VFM52_02305"
     CDS             3023..3502
                     /locus_tag="VFM52_02305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008435775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheW"
                     /protein_id="HET8764030.1"
                     /translation="MSAARELPREIRGVMLPVTGGRVLVPNTTMAEVITYAHPAPVAA
                     APSWLLGRLAWRGWGLPVLAFSVLAGVTDRELTDNTRVAILKALGGHPRLPYFGVLCQ
                     GFPRLTLVSSDMLVADAGSGTLPAGVREQVRVHDEAAWIPDLAAVEQMLVGALHAAA"
     gene            complement(3534..>3683)
                     /locus_tag="VFM52_02310"
     CDS             complement(3534..>3683)
                     /locus_tag="VFM52_02310"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017462740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016436 - rRNA (uridine) methyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0031167 - rRNA methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RsmE family RNA methyltransferase"
                     /protein_id="HET8764031.1"
                     /translation="GPEGGFGDADVADLRQAGYRALALGPRTLRTETAGLAAVAALQV
                     LAGDF"
BASE COUNT          595 a         1193 c         1301 g          594 t
ORIGIN      
        1 gcttgattcg ctggtcaacg cggccggcga agcatccatc taccgcgcgc gcctggagca
       61 gcaggtcggc aatttccggt tcaatctggt cgagctcgac cagacggtgg cgcgcctgcg
      121 cgaccagttg cgcaaacttg agattgaaac cgaaacccag atcctgtcgc gctaccagcg
      181 cgagaacgaa gccggtgagg gcactgcgtt cgatccgctg gagctggacc gcttctccaa
      241 cctgcagcag tattcgcgtg cgctggccga gtcggtatcc gacctggcgt ccatccagga
      301 catcctggat gaccagacgc gccagtccga aacgctgctg ctgcagcagt cgcgcgtgaa
      361 ctccgatttg caggacggcc tgatgcgcac gcgcatggtg ccgttcgaat cgctggtgcc
      421 gaacctgcgc cgcactttgc gcggcgcggc cgacgaactg ggcaagcgcg cgcagctgcg
      481 cgtcgagggc gcccagggtg aaatggaccg cagcgtgctg gagcgcatga aggcgccgtt
      541 cgagcacatg ctgcgcaatg cgctgacaca cggcatcgag gatccggccg agcgcgtcgc
      601 gcgcggcaag ccgatggaag gcacggtcac catcgaggtc ggccgccagg gtaccgaggt
      661 actggtgcgc gtgtccgacg atggcgccgg gtttgaccgt gacgccatcc gtgccaaggc
      721 catccagcgc gggctgctga agccggatgc gccgatcccg gacgccgagt tgtacaactt
      781 cgtgctgcag accgggtttt ccaccgccag caaggtcagc caattggccg gtcgcggcgt
      841 gggcatggac gtggtggcca atgaaatccg ccagctgggc ggttcgctgg cgattgaatc
      901 cgagcgcggg cgtggcacca ccttcaacat ccggttgccg ttcacgctgg ccgtcacgca
      961 agccatcacc gtgcgtgccg gcgacgccac gtttgcggtg ccgatgacgt cggtgcaggc
     1021 ggtgtcgcgc atccgccggc aggacatggc cgcgcacctg gcgtcgggcg aacgcagcat
     1081 cacttacgcg ggcgaggcct acgcgctgca tgacctgtcc cagctgctgg gcttcggtgc
     1141 ggccagcatt ccggaagatg gcacgggcca gctgccgttg ctgatggtgc acgcgggcga
     1201 cctgcgcgcc gccgtccgca tcgacagcgt gatcggttcg cgcgaaatcg tggtcaagcc
     1261 ggttgggccg caggtcagca acgtgcccgg catgttcggc gcgacgatcc tgggtgacgg
     1321 ttcggtgatg ttgatcctcg acctggcgcc gctggtgcgc catttcgatg cgcagcaggc
     1381 ggccgccgaa gccgccacca cggccgcgga agtaacgatt gcgccgcagg ttcctgaagt
     1441 tgcaccgcgc gtgcggcggg aaggcccgcg gctggtgatg gtggtggacg attcgatcac
     1501 gatgcgcaag gtcaccgccc gcgtactgga gcgcgagcag ctggaagtcg tcacggcgaa
     1561 ggatggcgtg gacgcgctgg agaagctgca ggaacgcgtg cccgacgtga tgctgttgga
     1621 tatcgagatg ccccggatgg acggcttcga gctggccacg cacatgaaga acgacagccg
     1681 gttccggcac gtgccgatca tcatgatcac ctcgcgcacc ggagaaaaac atcgccagcg
     1741 cgcgttcgag attggcgtcg accgctacct cggcaagccg tacagcgagt ccgatctgtt
     1801 gcataacgtc agtgaattgc tggaggctcc gcatgcttga tcaggtgccg attgcgcgcc
     1861 cgcgggtggc gctggtgtat ggagatgccg atgtggccgg gcatctgcgc aatgccgtcg
     1921 ccggccacgt gcagatcgtg tacgcgactt cggcagccga attcgacgcg gcccgcctgg
     1981 cggaatcgtg cgcgaccgcc gcgctgttga acctggacag ttgcgagtgg ctggacgcgg
     2041 tggagacccg actgcatgcg gccggtgtcg cggtggtcta caacgatccc gaaatttcgc
     2101 gtgcgctgca gggttgggag caggcgcgct ggttgcgcca tctcaccgcc aagctctccg
     2161 gcagcaccga cttcgatcca ccgcggccgg tttccgtcga accggcgcgg gtggtggaag
     2221 cgccagcact cgccacagga gatacgcaac cggtcgacgt cgcagcggaa ccggcaccgc
     2281 tgccggcgga tgccgagccg ttcgcggcgg tacctgcgac cgtggtggaa cagcccttgt
     2341 cgccggcgga aattgcgtcc atgaccgtca atttcagcgc caccccggaa cccgcacagg
     2401 tacctgcgga cccgctgcag gttgcggatg ctgacgtgtc cgcagcgacc ggggccgaac
     2461 ccgccggcgc ggttgcggcg ccggatgcgg atgtgccagc cgcagggctg gatggcgatg
     2521 gcgcgctgga tgtggatacc gaagcgctgt ccgcgctgat tgacgccagg ctggcagagg
     2581 ccgaggacca tgcatccggc gaagcgccac aggtgtggcg ggttgcgcac ggcggcgccg
     2641 tgtcggcggt tgaactgtcg cccgcggcgg agcccgaaat ggacaagtcc gctcatgctg
     2701 cgccggatgc cgatgcgacg gcacaggtgc tgccgatgga cgattccgaa ctgatgcaag
     2761 gcttgccggc cattgatgac tggcagctgg tggaccggga tgcgccgctc gcaccggccg
     2821 cgcccgggga gcagaagccg cgcggcgaac cagaaatttc catcgatttc gctggcctgg
     2881 aactggtgcc gatcgagccc gtggcgcagg ctgaaataca ggccgagccc gccggacgct
     2941 ggatgcacgc cggcaacggc gacgcgcatg ccgcgggcaa gcgcaagcag ccggccgcgc
     3001 caggtgccgc cgggggccac gcatgagtgc cgcacgggaa ctgccgcgcg agattcgtgg
     3061 agtcatgctg ccggtgacgg gtggccgcgt gctggtgccc aacacgacga tggccgaggt
     3121 catcacctac gcgcacccgg cgccggttgc cgctgcgcct tcctggttgc tgggccgctt
     3181 ggcctggcgc ggctggggcc tgccggtgct cgcgttttca gtgctggcgg gggtgaccga
     3241 ccgcgagttg acagacaata cccgcgtcgc gatcctgaag gcgctgggtg gccacccgcg
     3301 cctgccttat tttggcgtcc tgtgccaagg tttcccgcgc ctcacactgg tttcttccga
     3361 catgctggtt gccgacgccg ggtccggcac gctgcctgct ggcgtccgcg agcaggttcg
     3421 tgtgcatgac gaggcggcgt ggattcccga ccttgcggcg gtcgagcaga tgctggtggg
     3481 tgcgttgcac gcggcagcct gagtaccgcg gccgtccacg tttgacgggg cgatcaaaaa
     3541 tcgccagcga gcacctgcaa cgccgccact gcggccaatc ccgccgtctc cgtgcgcagg
     3601 gtgcgcggcc ccagtgccag cgcgcgataa cccgcctgcc gcagatccgc gacgtcggca
     3661 tcgccgaacc cgccttccgg ccc
//
LOCUS       DASSVL010000137         3069 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_384387, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000137 DASSVL010000000
VERSION     DASSVL010000137.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3069)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3069)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3069
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_384387"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>3069)
                     /locus_tag="VFM52_02315"
     CDS             complement(<1..>3069)
                     /locus_tag="VFM52_02315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019465571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="beta-ketoacyl synthase N-terminal-like
                     domain-containing protein"
                     /protein_id="HET8764032.1"
                     /translation="PATRLINGYGPTECTTFATTFPIPRPLPSHWDAIPIGRPIADTT
                     VHVCNARGEPVPVGVVGELLIGGAGVALGYRGAPAQTAERFVVDAASGARLYCTGDRV
                     RWLDDGVLAFVGRGDTQVKILGHRIELAGVAAALQALAGVRSAAVQVREDRPGRKQLV
                     AYVVGAGRLSEAALRQALARQLPEYMVPARVLQLDQLPMTANGKLDRRALPAPDRRRP
                     ELSRPYVPPAGTLETELCAVFATLLDIDRIGRVDHFFELGGSSLLAVQAMAMIGRRCG
                     RAPSPAAFFDNPTPAGLAQALSADSTPAPATSRAGMHDDPTAIIAMAGRFPGAPDVET
                     FWANLCAGRESITRFRDDELDPSIPASVRQDPHYVRARGVLDDVEGFDPAFFGITPRE
                     AELTDPQQRVFLELCWACMERAGHVPGAGAARVGVFAGMHNATYFQHHVAAHPDLVER
                     FGAFQVMLANEKDYVATRVAHRLNLTGPAISLNTACSTSLVAICEAVEALRAGRCEMA
                     LAGGVAITCPPRSGYLAQEGTMLSPDGHTRSFDAHAAGTVFSDGAGVVLLRPLSAALA
                     DGDPVIAVIRGGAVNNDGGGKASFMAPSRSGQAAVIRDALARSGVAPRDIGYVEAHGT
                     ATPLGDPIELEGLARAFGSDAGEGEACRIGSLKSNVGHMVIAAGVAGVIKAALALERE
                     ALPPTLHFHAPNPAFDLAASPFRVNATLVPWPRGAVPRRAGVSSFGVGGANAHVVLEE
                     APARESSEADATPQLMALSARTPEALAASARRLGAWLEATPSASLADVAWTLAAGRTT
                     FSHRATVVAGDAMDAAAQWARHAAAAPAASPVASGVAFLFPGQGSTYPGMGRALAARE
                     PVFRDALEACMAATPADAGFDLRERMASDDPDALLPTAVMQPALFAIEYALAQWWLSL
                     GVAPAVLVGHSVGEFVAAALAGVFDPLDAMRLVVRRGALMQAQPAGTMLSVRLGWEAI
                     HARLPAGVTAAVENAPGACVVAGAADAVAAFAATLAAEGIACRPVHTSHA"
BASE COUNT          489 a         1145 c         1053 g          382 t
ORIGIN      
        1 aacgcgtgcg aggtatgcac cgggcggcag gcgatgcctt cggcagcgag cgtggccgcg
       61 aaggccgcca cggcatcggc ggcaccagcc accacgcacg cgccaggtgc gttctcgacc
      121 gcagccgtca ccccggccgg cagccgggcg tggattgctt cccaccccag gcgcaccgac
      181 agcatggttc ccgccggctg ggcctgcatc aaggcgccgc gccgcacgac gaggcgcatg
      241 gcatccagcg ggtcgaacac gccggcaagc gccgccgcga caaactcgcc gacgctgtgc
      301 cctaccagca ccgccggcgc cacaccgagg ctaagccacc attgcgccaa cgcatattcg
      361 atggcgaaca gcgcgggctg catcaccgcg gtcggcagca gcgcgtccgg gtcgtcgctg
      421 gccatccgct cgcgcaggtc gaacccggca tcggctggcg tcgccgccat gcacgcttcc
      481 agcgcatcgc ggaacaccgg ttcgcgcgcc gccagcgcgc ggcccatgcc gggataggtc
      541 gagccctgcc ccggaaacag gaaggccacg ccggatgcca cggggctcgc ggcgggcgcg
      601 gcggcagcgt gccgcgccca ctgcgccgcc gcgtccattg cgtcgccagc caccaccgtg
      661 gcccgatggg agaacgtcgt gcggccggca gccagggtcc aggcgacatc cgccagcgat
      721 gccgacggcg tcgcctccag ccaggcacca agccggcgtg ccgatgccgc cagcgcttcc
      781 ggcgtacgcg ccgagagcgc catcagctgt ggtgtcgcgt cggcctccga tgattcgcgc
      841 gccggcgcct cctccagcac cacgtgcgcg ttcgcgccac cgacgccaaa ggaactgacg
      901 ccggcccgcc gcggcaccgc gccgcgcggc catggcacca gcgtcgcgtt cacccggaac
      961 ggcgaggccg cgaggtcgaa cgccgggttg ggcgcgtgga aatgcagcgt cggcggcagc
     1021 gcctcgcgct ccagcgccag cgcggccttg atcacgccgg cgacgccggc ggcgatcacc
     1081 atgtggccga cgttgctttt cagcgagccg atgcggcacg cctcgccttc gccagcatcc
     1141 gaaccaaatg cgcgggccag gccttcgagt tcgatcggat cgcccagcgg cgtcgccgtg
     1201 ccatgcgcct cgacataacc gatgtcgcgc ggcgcgacgc cggagcgcgc cagcgcatcg
     1261 cggatcaccg ccgcctggcc gctgcggctc ggcgccatga aactcgcctt gccgccgccg
     1321 tcgttgttga ccgccccgcc gcggatcacg gcaatcaccg ggtcgccgtc ggccagcgcc
     1381 gcggacagcg gccgcaagag cacgacaccg gcgccatcgc tgaacacggt gccggcggcg
     1441 tgcgcatcga agctgcgcgt gtggccgtcc ggcgacagca tggtgccttc ctgcgcgagg
     1501 tagccgctgc gcggcgggca ggtaatcgcc acgccgccgg ccagcgccat ctcgcagcgg
     1561 ccggcacgca gcgcctcgac ggcctcgcag atcgccacca gcgacgtcga gcacgcggtg
     1621 ttgaggctga tcgccggccc ggtgaggttc aggcgatggg caacgcgggt ggcgacgtaa
     1681 tctttctcgt tcgccagcat cacctggaat gcgccgaagc gctcgacgag atcgggatgc
     1741 gcggccacgt ggtgctggaa atacgtggcg ttgtgcatgc cggcaaacac gccgacccgc
     1801 gccgcgcccg ctcccggcac gtggccggcg cgctccatgc acgcccagca cagttcgaga
     1861 aacacgcgct gctgcgggtc ggtcaactcg gcctcgcgcg gggtaatgcc gaaaaacgcg
     1921 ggatcgaaac cttcgacatc gtccagcaca ccacgcgcgc ggacgtagtg cgggtcctgc
     1981 cgcaccgacg ccggaatcga cgggtccagc tcgtcgtcgc gaaagcgcgt gatcgactcg
     2041 cgacctgcgc acaggttggc ccagaacgtt tccacgtcgg gcgcgccagg aaagcgcccg
     2101 gccatcgcga tgattgcagt agggtcgtcg tgcatgcctg cacgcgacgt ggctggcgcc
     2161 ggggtcgaat cggccgacaa cgcctgcgca agcccggccg gggtcgggtt gtcgaagaac
     2221 gcggccggtg acggcgcacg gccgcagcgc cggccgatca tggccattgc ctgcaccgcg
     2281 agcaacgagc tgccgcccag ctcgaagaaa tgatcgacgc ggccgatgcg gtcgatatcg
     2341 agtagcgtgg cgaacaccgc gcacagttcg gtttcgagcg tgccggccgg aggcacatac
     2401 ggccgggaaa gctccggccg ccgccgatcc ggcgccggta gcgcgcggcg atcgagcttg
     2461 ccattcgcgg tcatcggcaa ctggtcgagc tgcagcacgc gcgccggcac catgtactcc
     2521 ggcagttggc gtgcgagcgc ctggcgcagc gcggcttcgg acaaccggcc cgcgccgacc
     2581 acgtaggcca ccagctgctt gcggccgggt cggtcctcac gcacctgcac ggcggcgctg
     2641 cgcaccccgg ccagggcctg cagggcggcc gcgaccccgg ccagctcgat gcggtggccg
     2701 aggatcttga cttgggtgtc accgcgccca acgaacgcca gcacgccatc atccagccag
     2761 cgcacgcgat ccccggtgca gtacaggcgc gcgccgctgg ccgcgtccac cacaaaacgt
     2821 tcagccgtct gcgccggggc accacggtaa cccagtgcca cgcccgcacc accgatgagc
     2881 agttcaccga ccacgccaac cggcaccggc tcgccgcgcg cattgcacac gtgcaccgtg
     2941 gtgtcggcaa tcggccgacc gatgggaatc gcatcccagt gactgggcaa cggacgcgga
     3001 atggggaagg tcgtcgcgaa cgtcgtgcat tcggtcggcc catagccatt gatcaacctg
     3061 gtggccggc
//
LOCUS       DASSVL010000138         2436 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_426800, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000138 DASSVL010000000
VERSION     DASSVL010000138.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2436)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2436)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2436
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_426800"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            22..1740
                     /locus_tag="VFM52_02320"
     CDS             22..1740
                     /locus_tag="VFM52_02320"
                     /EC_number="4.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015448980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxy-acid dehydratase"
                     /protein_id="HET8764033.1"
                     /translation="MRSDVMKTGPDRAPARAMMRATGLDDAAIAKPLVAVVHTWTNVS
                     PCNLNLRELANAAIEGVRAAGGTPVEFNTIAVTDGIAMGTPGMRYSLVSREVITDSIE
                     AAVEGHLCDAMVILCGCDKTIPAAAMAMARLDIPAVALYGGTIAHGLHKNRPITIQQV
                     FEAVGAHGAGTMDDCELHSVECDACAGAGACGGQFTANTMAMVITTLGLSPMGANDIP
                     ATHPEKLKAAFRCGELVMECLRKGRTPRALINRTSLRNAARMVAATAGSTNSVLHMLA
                     IAREAGVDWKLEDFQPETEQTPVIADLMPSGRYTAVEMYDAGGVARVAQELIAAGRLE
                     DAPTVTGRTLFEEAAAAPRFADQHVVYPVASPIKPHGGYSILYGNVAPEGCVLKIPGK
                     NSAGHGKTHFEGTAKVFESEEDAFAAVQDGRVGAGDVVVIRNEGPAGGPGMREMLGVT
                     AALIGRGLGDDVALITDGRFSGATHGFMVGHIAPEAARGGPIGLLHEGDRIVIDAQSR
                     TISTDADLAARRATWQPPAPKATRGLLAKFAVLVSSASDGATTSAANVTRRTTATHTT
                     TQGVTA"
     gene            1737..>2436
                     /gene="ilvC"
                     /locus_tag="VFM52_02325"
     CDS             1737..>2436
                     /gene="ilvC"
                     /locus_tag="VFM52_02325"
                     /EC_number="1.1.1.86"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014648333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketol-acid reductoisomerase"
                     /protein_id="HET8764034.1"
                     /translation="MSTQILASSRIAVLGYGSQGRAHAQNLRDSGLDVVVGLRKNGPS
                     WQKAKAEGFAVAEPADAVKGADLVAVLVPDMVQPALYEQAIAPNLKPNGALLFAHGFN
                     IHFGQIKPRADIDVIMVAPKGPGALVRTEYERGRGVPDIWAVHQDVSGHAADKALAYA
                     DGIGGARAMLIKTTFKEETETDLFGEQAVLCGGASSLVQAGFETLVEAGYQPEIAYYE
                     VFHELKLIVDLFYEG"
BASE COUNT          397 a          883 c          833 g          323 t
ORIGIN      
        1 ttggttccga tggagcatgt gatgcgcagt gacgtgatga aaaccggccc ggaccgcgcg
       61 cccgcgcggg cgatgatgcg ggcgaccggc ctggacgacg cggcgatcgc caagccgctg
      121 gtcgccgtgg tgcacacctg gaccaacgtc agcccgtgca acctcaacct gcgcgagctg
      181 gccaacgcgg cgatcgaagg cgtgcgcgcc gctggcggca cgccggtgga gttcaacacc
      241 atcgcggtca ccgacggcat cgcgatgggc acgcccggca tgcgctattc gctggtcagc
      301 cgcgaggtca tcaccgactc gatcgaggcc gcggtcgaag gccacctgtg cgatgcgatg
      361 gtgatcctgt gcggttgcga caagaccatc cccgccgcgg cgatggcgat ggcgcggctc
      421 gacatcccgg cggtggcgct gtacggcggc acgattgcgc acggcctgca caagaaccgg
      481 ccgatcacca tccagcaggt gttcgaggcg gtcggcgcgc acggcgccgg caccatggat
      541 gactgcgaat tgcactcggt ggaatgcgac gcctgcgccg gcgccggcgc ctgcggcggc
      601 cagttcaccg ccaacacgat ggcaatggtc atcaccacgc tggggctgtc gccgatgggc
      661 gcgaacgaca tcccggcgac gcacccggaa aaactcaagg ccgcgttccg ctgcggtgag
      721 ctggtgatgg aatgcctgcg caagggccgc acgccgcgtg ccctgatcaa ccgtacctcg
      781 ctgcgcaacg ccgcgcgcat ggtcgccgcc accgccggct ccaccaactc ggtgctgcac
      841 atgctggcga tcgcgcgcga ggccggggtg gactggaagc tggaggattt ccagccggaa
      901 accgagcaga cgccagtgat cgccgacctc atgccctccg gccgctacac cgcggtggag
      961 atgtacgacg ccggcggcgt cgcgcgcgtc gcgcaggagc tgatcgccgc cggccggctg
     1021 gaggatgcgc cgaccgtcac cggccgcacg ctgttcgagg aggccgcggc cgcgccgcgc
     1081 ttcgccgacc agcacgtggt ctacccggtc gccagcccga tcaagccgca cggcggctac
     1141 tccatcctgt acggcaacgt cgcccccgag ggctgcgtgc tgaagattcc cggcaagaac
     1201 agcgccggcc acggcaagac ccacttcgag ggcaccgcca aggtgttcga gagcgaggag
     1261 gacgccttcg ccgccgtgca ggatggccgc gtcggcgcgg gcgacgtcgt ggtcatccgc
     1321 aacgagggcc cggccggcgg ccccggcatg cgcgagatgc tcggcgtcac cgccgcgctg
     1381 atcggccgcg gcctgggcga cgacgtggcg ttgatcaccg acggccgctt cagcggcgcc
     1441 acccacggtt tcatggttgg ccacatcgcg ccggaagccg cgcgcggcgg cccgatcggc
     1501 ctgctgcatg aaggcgaccg tatcgtgatc gatgcgcagt cacgcacgat ctccaccgac
     1561 gccgacctcg ccgcgcgccg cgccacctgg cagccgccgg cgccgaaagc cacccgcggc
     1621 ctgctcgcga aattcgcggt gctggtgagt tccgcctccg acggcgccac cacctccgcc
     1681 gccaacgtca cccgccgcac caccgccacc cacaccacca cccagggagt caccgcatga
     1741 gcacccaaat cctcgcttca tcccgcatcg ccgtgcttgg ctacggcagc cagggccgcg
     1801 cgcatgcgca gaacctgcgc gattccggcc tcgacgtcgt cgtcggcctg cgcaagaacg
     1861 gcccgtcgtg gcagaaggcc aaggccgagg gcttcgccgt cgccgaaccc gccgacgccg
     1921 tgaagggcgc cgacctcgtc gcggtgctgg tgccggacat ggtccagccc gcgctgtacg
     1981 agcaggcgat cgcccccaac ctcaagccga acggcgcgct gctgttcgcg cacggcttca
     2041 acatccactt cgggcaaatc aagccgcgcg cggacatcga cgtgatcatg gtcgcgccga
     2101 agggcccggg cgcgctggtg cgcaccgagt acgagcgcgg ccgcggtgtg ccggacatct
     2161 gggccgtgca ccaggacgtt tccggccacg ccgcggacaa ggcgctggcg tatgccgacg
     2221 gcatcggcgg cgcgcgcgcg atgctgatca agaccacctt caaggaagag accgagaccg
     2281 acctgttcgg cgagcaggcc gtgctgtgcg gcggcgccag ctcgctggtg caggccgggt
     2341 tcgagaccct ggtggaagcc ggctaccagc ccgagatcgc ctactacgag gtgttccacg
     2401 agctgaagct gatcgtcgac ctgttctacg aaggcg
//
LOCUS       DASSVL010000139         3571 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_666928, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000139 DASSVL010000000
VERSION     DASSVL010000139.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3571)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3571)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3571
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_666928"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(240..>3571)
                     /locus_tag="VFM52_02330"
     CDS             complement(240..>3571)
                     /locus_tag="VFM52_02330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017463561.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ankyrin repeat domain-containing protein"
                     /protein_id="HET8764035.1"
                     /translation="LLLLGASLSMAAVCHAIGFGCEPSFTRTVIRRGPPHLIALAVHT
                     AVVFLLVAWPLAVLSRAPSLAAALGLAVALAIALVVLWRLWPVFGLVFEWDDAFPAGA
                     EHSWITAALARSTTFARHLTRGRDLFVTHFLPASLAQLAIAFGALSLAGIGANFPDEI
                     RTAALFLFAVVVLPVCSLIVADRTLRLLFGGRGQHVPPPTDTPHSRTPDPDPDRAPPA
                     DANDPDDAAPHEAEPAPIEPKLPQATLDEGLLDAIRAGDVAGASAWLARGASPDAAPP
                     AGARDQRSALVLAAELPDTRLLRALIGKGAHVNLPHAGLTPLLAATRSCSQGRPETVT
                     TLVANGADPSLPDADGNTPLHHAALCSEAAVAAILIDAQAPLETRNRNQATPLAVAAG
                     AANWPLLRFLVEHGALADTALPAAAGIADDDPEGVQILLKHKAHVNAVDALGASALTH
                     AARENHAQIARVLLDAGANAASADRYGTTPLMEAARAGATDVVTSLAEKQPDVHAADQ
                     HGRTALTLACQSPRANAECLRALLALGADPQRKGSDGRSAIDQASAAGRWDLVALMDP
                     EAPLPASHAQASQPEAGADTPSHLLDALRFDHWKVIARFAERVRSWPETELASLYLEL
                     ADHADAAPRAWLLEHGLAAEARLDDGTRLFDALLDHLPGSRAAVRQLLDAGATPAGAG
                     RFAGTLARLGERDDDASFALMLLERGADLFGTDADGRSPLHHASRPALLPVLDALLAR
                     GADPNARDRAGATPLHAALDTKPETALPLVKSLIAHGADPESPAASGETPLGLALARG
                     ATQLEHWLRWIGWPLPKRPLRDADLPAAAADADAVARLLELGLPADARDERGATALLR
                     ASGAGALQSVQRLLAAHADPRLTVDTGASPLSAAVSARHADIVRALVSADVPIDERHT
                     DDVTALMIAAALGHADMVTCLRELGANTTLTDADGHTALHAAARFCFDSRDSLRCRRL
                     LDALLVEDGAPVNAADRRGATPLLMLLGVHVKPGAECDGTHLGALLPVLLDAGADMRH
                     ADEHGVTALHACAMHALFEPARVLLARGGDRDARDCMQRTPAEVARVLGYVDLALELS
                     PRRSAPLNAQVVTPLMTHPSN"
BASE COUNT          542 a         1211 c         1320 g          498 t
ORIGIN      
        1 ggcgctgcgc cagaccacgc gcgaggctta tgcggagttg cagggcctgt tcgaagccga
       61 tacgcgggcg caggcgcgag cggaaactgc cgacaaggtg tgaagcacct ggtcaaatgc
      121 gggtcaggga tgacccgccg cggatcaagc gcatcaagtg cttgatccgg cgaagacgag
      181 tccgggcgtg taccggactc gtcgtatcga taaagtgcag gacagcactt tatcgacatt
      241 caattgctcg gatgcgtcat caacggcgtc acgacctgtg cattgagcgg tgcgctgcgg
      301 cgcggtgaca gctccagcgc aaggtcgacg tagcccagca cccgtgcgac ttccgcgggc
      361 gtgcgctgca tgcagtcgcg cgcatcgcgg tcgccgccgc gtgccagcag tacgcgcgcg
      421 ggttcgaaaa gggcgtgcat cgcgcaggcg tgcaaggcgg tgacgccgtg ttcgtcggcg
      481 tgccgcatgt cggcaccggc atccagcagc accggaagca gcgcacccag gtgcgtgccg
      541 tcgcattcgg cgcccggctt cacgtgcacg cccagcagca tcaggagcgg ggtcgcaccg
      601 cgccggtcgg cggcattcac cggcgcgccg tcttcgacga gcaatgcatc cagcaggcgc
      661 cggcagcgca ggctgtcgcg gctgtcgaag cagaaccgtg cggccgcgtg cagcgcggtg
      721 tggccgtccg catcggtgag cgttgtgttc gcgccgagtt cgcgcaggca ggtgaccatg
      781 tcggcgtggc cgagcgcggc ggcgatcatc agcgcggtca catcgtcggt gtggcgctcg
      841 tcgatcggca cgtccgcgga taccagcgcc cgcacgatgt cggcgtggcg cgcgctgacg
      901 gcggccgaca acggcgaggc gccggtgtcg acggtgagcc tcggatcggc gtgcgcagcc
      961 agcaaccgtt gcacgctttg caacgcgcct gcgccgctcg cacgcagcag cgcggtggcg
     1021 ccgcgctcgt cgcgcgcgtc ggcaggcaga ccaagttcca gtagtcgcgc gaccgcatcg
     1081 gcatcggcgg cggcggcagg cagatcggcg tcgcgcagcg gacgcttggg cagcggccaa
     1141 ccgatccagc gcaaccaatg ctcgagttgc gtcgcgccgc gtgccaaggc gaggcccagc
     1201 ggcgtctctc cgctggccgc ggggctctcg ggatcggcgc cgtgcgcgat caacgatttc
     1261 accagcggca gcgcggtttc gggtttggta tccagcgccg cgtgcaacgg cgtggcgccg
     1321 gcgcgatcgc gggcgttcgg atcggcgccg cgcgcgagca gcgcgtccag gaccggcagc
     1381 agtgctggac gactggcatg gtgcagcggg gagcgcccat cggcatccgt accgaacagg
     1441 tccgcgccgc gttccagcaa catcagtgcg aacgaagcat cgtcgtccct ttcgccgagt
     1501 cgcgccaatg tgcccgcgaa acgccccgcg ccggccggcg tcgcgccggc gtccagcagc
     1561 tggcgcacgg ccgcgcgtga tccgggcagg tgatccagca gtgcatcgaa caagcgggtg
     1621 ccgtcgtcga gacgcgcttc ggcagccagg ccatgttcca gcagccacgc gcgcggcgcg
     1681 gcatcggcgt gatcggcaag ctcgagatag agcgatgcga gttccgtttc cggccagcta
     1741 cgcacgcgtt cggcgaaacg tgcgatcact ttccagtggt cgaagcgcag cgcatcgagc
     1801 aggtgcgaag gcgtgtccgc gccggcttcc ggctggctcg cctgcgcgtg gctggccggc
     1861 agtggcgctt ccgggtccat cagcgcgacc aggtcccagc gtcccgctgc ggaggcttgg
     1921 tcgatcgcgc tgcgcccgtc gctgcccttg cgctgcggat cggcgccgag cgcgagcagc
     1981 gcgcgcaggc attcggcgtt cgcgcgcggc gactggcagg cgagcgtcaa tgcggtgcgg
     2041 ccgtgctggt cggcggcgtg cacgtccggc tgcttttccg caagcgaggt gacgacgtcg
     2101 gtggcgcccg cgcgcgcggc ttccatcagt ggcgtggtgc cgtagcggtc ggcgctcgcg
     2161 gcgttggcgc cggcatcaag caggacgcgc gcgatctgcg catggttctc gcgcgcggcg
     2221 tgcgtcagcg cgctcgcgcc caacgcatcg accgcgttca cgtgtgcctt gtgcttcagc
     2281 aggatctgca cgccttcggg atcgtcatcg gcgataccgg ccgcggcggg cagcgcggtg
     2341 tctgcgagcg cgccgtgttc gaccaggaat cgcagcaacg gccagttcgc ggcgccggca
     2401 gcgaccgcga gtggcgtggc ctggttgcgg ttgcgggttt ccagtggcgc ctgcgcgtcg
     2461 atcaggatcg cagcgaccgc tgcctccgag cacaacgccg catggtgcag cggcgtgttg
     2521 ccgtcggcgt cgggcaggga cggatcggcg ccgttcgcga ccagcgtcgt caccgtttcc
     2581 ggccgccctt ggctgcacga gcgcgtcgcc gccagcagcg gcgtcaggcc cgcgtgcgga
     2641 aggttcacgt gcgcgccctt gccgatcagg gcgcgcaaca gccgcgtgtc cggcaactcg
     2701 gccgccagca ccagcgcgga acgctggtcg cgcgccccgg cgggcggggc ggcgtccgga
     2761 ctcgcgccac gtgcgagcca ggcactggca ccggcgacat caccggcacg aatcgcgtcg
     2821 agcaggcctt cgtccaacgt cgcctgcggc agcttcggct cgatgggcgc aggttcggcc
     2881 tcgtgcggcg cggcgtcgtc gggatcgttt gcgtcggcgg gcggcgctcg atccggatcg
     2941 ggatcggggg tgcgcgaatg cggcgtgtcg gtcggcggcg gtacgtgctg gccgcgtccg
     3001 ccgaacagca ggcgcaaggt acggtcggcg acgatcagcg aacacaccgg caacaccacc
     3061 accgcgaaca ggaacagcgc ggcggtgcgg atttcatcgg gaaaattggc gccgatgccg
     3121 gcgaggctca acgcaccaaa cgcgatcgcg agttgcgcca gcgatgccgg caggaagtgc
     3181 gtgacgaaca ggtcgcgccc gcgtgtcaga tgccgcgcga aggtggtgct gcgtgccagt
     3241 gcggcggtga tccacgaatg ttccgcgccg gcgggaaatg catcgtccca ttcgaagacc
     3301 agtccgaaca ccggccacaa ccgccacaac accacaagcg cgatcgccag ggccacggcc
     3361 agtcccagcg ccgccgccag cgagggcgcg cgcgacagga ccgcgagcgg ccaggccacc
     3421 agcaggaaca ccacggcagt gtggacggcc agcgcaatca ggtggggcgg gccgcgccgg
     3481 atcacggtgc gcgtgaacga aggttcgcag ccgaagccga tcgcgtggca cacggccgcc
     3541 atcgacagcg aagcgccgag cagcagcaac a
//
LOCUS       DASSVL010000140         4318 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_214610, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000140 DASSVL010000000
VERSION     DASSVL010000140.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 4318)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4318)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4318
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_214610"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..4299)
                     /locus_tag="VFM52_02335"
     CDS             complement(<1..4299)
                     /locus_tag="VFM52_02335"
                     /inference="COORDINATES: protein motif:HMM:NF017930.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucoamylase family protein"
                     /protein_id="HET8764036.1"
                     /translation="MLNLDAIARSAGRLLFTRRHLLEWTAMTEAMRGAANSLPGYLRL
                     MWVAPATALVAGLVIGLHAPLSLPAALRFLVLWFAAPGIAWAISRTPPRPPLPLDVTQ
                     RAFLHGVARRVWLWFETFAGADENWLPPDNCQVFPVEQVAHRTSPTNIGMALLANLTA
                     CDFGYLTHGGLLQRTAALLDTLHKLPRHRGHFYNWYDTQTLQPLPPRYVSSVDSGNLM
                     GCLLVLANALEHADDDPLVARALGGGLRDTARVLGSELAHVEATDPHANLALAATLEE
                     LDTLIADAAANADALPVLHGLLARIETEAQRLAQLNAENAIGGEFADWTAALLRQAGT
                     ACEELDELAPWLALGDSGSDDEATRALLAELENNPTRQRAVALAIEITARLQTPGGVG
                     APDLCAALDEMRATLNRRRDDARALAAACRERAEMDLSFLWDKQREQFTIGYDVDRDK
                     RDGGRYDLLASEARILSYVAIAQGQVPPSHWFKLGRLLTIAAGRPALVSWSGSMFEYL
                     MPNLLMPVHHGTLLDDTCGAAVIRQIRYGAQQQVPWGVSESAYNATDANLTYQYRAFG
                     VPGLGLKRGLGDDLVIAPYATVMALMVEPSAACDNLETLAGMGALTRYGFYEALDFTT
                     GRVSDGEEFALVKSWMAHHHGMSFLALSSLLNRQPMQRRFMREPMFGAYELLLREKIP
                     EARPRHPATLDVEQPRQTRARVHAEVREIMRMDTPLPEAHLLSNGNYHVLLTQTGAGY
                     SRWRNLAVTRWRGDATRDDEGTFIYLRDADSGKTWSATCQPLGDANGTCRATFSQARA
                     EFHRDDFGIATELLVAVSAEDDIELRRLRLTNHTGKPRTLDIISYAEPVLAPPEADLA
                     HPVFSKLFLETESVPELDALLVSRRPRSPDEHHPWLLHQMTTRGGIVGEGSCETDREA
                     FLGRHGGIAAPRAVATGAPNAGRTGAVLDPVVSLRRRIRILPGHTAGIDILTGVAPER
                     DAALTLARKYRERHLHQRVFQLAWTHEQVTLQQLNMSAAEAQRYDHVASTLLYGPITA
                     RNLSDAALPPQSALWKHGISGDLPIVLARIANASQIDLVRHLIQAHGFWQMSGLDADL
                     LIWNEELSGYRQELQDHILYLIESGAEARGGQGRGRMFAWRIEHLSAPDRALMLATAR
                     CVFSGDEGRLRDQIARLNPVDAPAAAPALLPRHKSPPGGYALQPVTEDLRATNGYGGF
                     RNDGGEYTIWLRGDRPTPAPWCNVLANPGFASVISESGGAYTFAENAHEFRLTPWYND
                     PLRDASGEALWLRDEDSGEYWSATALPTPSGDPYRACHGFGSSRFEHAHADISSELDV
                     CVARTAPVKLALLKLVNKSDTTRTLSVTSYVEWVLGEHRERAGRHVRTEFDAEAGAVL
                     AQNPYSDVFASRVAFHRLGVPRPEFSCDRRAFLGRNRDRAAPLGMRLARLNGGAG"
BASE COUNT          619 a         1438 c         1564 g          697 t
ORIGIN      
        1 gcccgcgcca ccgttcaatc gtgccaggcg catccccagc ggcgccgcgc ggtcgcggtt
       61 gcggccgagg aacgcgcgtc ggtcgcagct gaattccggc cgcggcacgc ccagccggtg
      121 gaacgccacg cggctggcga acacgtcgga gtacgggttt tgcgccagca ccgcgccggc
      181 ttcggcgtcg aattccgtgc gcacgtggcg gccggcgcgc tcgcggtgtt cgcccagtac
      241 ccattccacg taactggtga cggacagcgt gcgcgtggtg tcgctcttgt tgaccagctt
      301 cagcagcgcg agtttcaccg gtgccgtgcg cgccacgcac acgtcgagtt cactggagat
      361 gtcggcgtgc gcgtgttcga aacggctgct gccgaagccg tggcaggcgc ggtagggatc
      421 gccgctgggc gtcggtaggg ccgtggccga ccagtattcg ccgctgtctt cgtcccgcag
      481 ccacagggcc tcgccgctgg cgtcgcgcag cgggtcgttg taccacggcg tcaggcggaa
      541 ttcgtgtgcg ttttcggcga atgtgtacgc gccgccggat tcactgatca cgctggcgaa
      601 gcccgggttg gccagcacgt tgcaccacgg tgcgggtgtg ggccgatcac cgcgcaacca
      661 gatcgtgtat tcgccgccat cgttgcgaaa cccgccgtag ccattggtgg cgcgcagatc
      721 ctcggtcacg ggctgcagcg cgtagccgcc gggcggcgac ttgtgccgcg gcagcagcgc
      781 gggcgccgcc gcgggtgcgt ccaccgggtt aagccgcgcg atctggtcgc gcaggcggcc
      841 ttcgtcgccg gagaacacgc agcgtgccgt ggccagcatc aacgcacgat ccggcgcgga
      901 caggtgttcg atgcgccacg cgaacatccg gccgcgaccc tggccgccgc gcgcctcggc
      961 gcccgactcg atcaggtaca ggatgtggtc ctgcagttcc tggcggtagc ccgacagctc
     1021 ttcgttccag atcaaaaggt cggcgtccag gccgctcatc tgccagaaac cgtgggcctg
     1081 gatgaggtgc cgcaccaggt cgatctggct ggcattggcg atgcgcgcca gcacgatcgg
     1141 caggtcgccg gaaatgccgt gcttccacaa cgcggattgc gggggcagtg cggcgtcgga
     1201 caggttgcgc gcggtgatcg gtccgtacag caacgtgctg gccacgtggt cgtagcgctg
     1261 cgcttcggca gcgctcatgt tgagctgctg cagggtcacc tgctcatggg tccaggccag
     1321 ctggaacacg cgctggtgca ggtgccgctc gcgatacttg cgcgccagtg tcagcgccgc
     1381 gtcgcgttcg ggcgccacgc cggtaaggat gtcgatgccc gcggtgtgtc ctggcaggat
     1441 gcggatgcgc cggcgcagtg acacgacggg atcgagcacc gcgccggtgc gccccgcgtt
     1501 cggcgcgccg gtggccactg cgcgtggcgc cgcgatgccg ccgtggcggc cgaggaacgc
     1561 ttcgcgatcg gtttcgcagc tgccttcgcc gacgatgccg ccgcgcgtgg tcatctggtg
     1621 caacagccag ggatgatgtt cgtcggggct gcgcggccgg cgcgaaacca gcagcgcatc
     1681 gagttcgggc accgattcgg tttccaggaa cagcttgctg aacaccggat gcgccaggtc
     1741 cgcttccggc ggcgccagca ccggttcggc gtagctgatg atgtcgagcg tgcgcggctt
     1801 gccggtgtgg ttggtcaggc gcaggcggcg cagctcgatg tcgtcctcgg ccgaaacggc
     1861 gaccagcagt tcggtggcga tgccgaaatc gtcgcggtgg aattccgccc gcgcctgcga
     1921 gaacgtcgcg cggcaggtgc cgttggcatc gcccagcggc tggcaggtgg ccgaccacgt
     1981 cttgccggaa tccgcgtcgc gcagatagat gaaggtgcct tcgtcgtcgc gcgtcgcatc
     2041 gccgcgccaa cgcgtcactg caaggttgcg ccagcggctg tagcccgcgc cggtctgggt
     2101 cagcagcacg tgatagttgc cgttggacag caggtgcgct tccggcagcg gtgtgtccat
     2161 gcgcatgatc tcgcgcacct cggcgtgcac gcgtgcgcgg gtctggcgcg gttgttccac
     2221 gtccagcgtc gccggatggc gcggacgcgc ttcgggaatc ttctcgcgca gcagcagttc
     2281 gtaggcgccg aacatcggct cgcgcatgaa gcggcgctgc atcggctggc ggttgagcag
     2341 cgatgacagc gccaggaaac tcatgccgtg gtggtgcgcc atccagcttt tcaccagcgc
     2401 gaattcctcg ccgtcgctga cgcggccggt cgtgaagtcc agtgcctcgt agaaaccgta
     2461 gcgcgtgagc gcacccatgc cggccagggt ttcaaggttg tcgcaggcgg cggacggctc
     2521 gaccatcagc gccatgaccg tcgcgtatgg cgcgatcacc aggtcgtcgc ccaggccgcg
     2581 cttcaggccc aggccgggca cgccgaacgc gcggtactgg taggtgaggt tggcgtcggt
     2641 ggcgttgtag gccgattcgg aaacgcccca cggcacctgc tgctgcgcgc cgtagcggat
     2701 ctggcgtatc accgcggcgc cgcaggtgtc gtccaggagc gtgccgtggt ggaccggcat
     2761 caacaggttc ggcatcaagt actcgaacat cgagcccgac cacgacacca gcgccgggcg
     2821 tccggccgcg atggtcagca ggcggcccag cttgaaccag tgcgagggcg gtacctggcc
     2881 ctgcgcgatg gcgacgtagc tgaggatgcg cgcctcggag gccagcaggt cgtagcggcc
     2941 gccgtcgcgc ttgtcgcggt ccacgtcgta gccgatggtg aattgttcgc gctgcttgtc
     3001 ccacaggaac gacaaatcca tttccgcgcg ttcgcggcag gccgcggcca gcgcgcgcgc
     3061 gtcgtcgcgg cgacggttca gggtggcgcg catttcgtcc agggccgcgc acagatccgg
     3121 tgcgccaacg ccgcctggcg tctgcaggcg cgccgtgatc tcgatcgcca gcgcgacggc
     3181 ccgctgccgc gtcggattgt tttccagctc ggccagcaat gcgcgggtgg cctcgtcgtc
     3241 gctgcccgaa tcgcccagtg ccagccacgg cgccagctcg tccagttcct cgcaggccgt
     3301 gccggcctgg cgcagcaggg ccgccgtcca atccgcgaat tcgccgccga tggcgttctc
     3361 ggcgttaagt tgcgccaggc gctgggcctc ggtttcgatg cgcgccagca ggccgtggag
     3421 cacgggcagc gcgtcggcat tcgcggccgc atcggcgatc agggtgtcga gttcttccag
     3481 cgtggccgcc agcgcgaggt tggcgtgcgg gtcggtcgct tcgacatgcg ccagctcgct
     3541 gcccagcacg cgcgcggtat cacgcaagcc gccgcccagc gcgcgcgcca ccagcggatc
     3601 gtcgtcggcg tgctccagcg cgttggccag cacgagcaaa cagcccatca ggttgccgga
     3661 atccacgctg gacacgtagc gcggcggcaa tggttgcagg gtctgcgtgt cgtaccagtt
     3721 gtagaaatgg ccgcggtggc gcggcagctt gtgcagcgtg tccagcagcg cggcggtgcg
     3781 ctgcagcagg ccgccgtgcg tgaggtaacc gaagtcgcac gcggtcaggt tggccagcaa
     3841 cgccatgccg atgttggtgg gcgaggtccg gtgcgcgacc tgctcgaccg gaaacacttg
     3901 gcagttgtcc ggcggcagcc agttttcgtc cgcgccggcg aaggtttcga accacagcca
     3961 cacgcgccgc gcaacgccgt gcaggaaggc gcgctgggtg acgtccagcg gcaagggcgg
     4021 acgcggcggc gtgcggctga tcgcccacgc gatgcccggc gcggcgaacc acagcaccag
     4081 gaagcgcagt gccgcgggca gcgacagcgg cgcgtgcagg ccgatcacga ggcccgcgac
     4141 cagcgcggtg gccggcgcaa cccacatcag gcgcaggtat ccgggcaggc tgttggcggc
     4201 gccgcgcatc gcctcggtca ttgccgtcca ctcgagcagg tgccggcggg tgaacagcag
     4261 gcgtccggca ctgcgcgcga tggcgtccag gttcagcatg gtttcgaatg gcagcgtc
//
LOCUS       DASSVL010000141         3112 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_200749, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000141 DASSVL010000000
VERSION     DASSVL010000141.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3112)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3112)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3112
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_200749"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..230)
                     /locus_tag="VFM52_02340"
     CDS             complement(<1..230)
                     /locus_tag="VFM52_02340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015448147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase"
                     /protein_id="HET8764037.1"
                     /translation="MTHYAGPLLTRETAAALSAAHAAGATTWKGSLDLGRSRESVALQ
                     ADGWVSHGARYPYPPALKPRSIHYWDGDAFAPV"
     gene            348..755
                     /locus_tag="VFM52_02345"
     CDS             348..755
                     /locus_tag="VFM52_02345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8764038.1"
                     /translation="MGKRLLGCLSVAALFVALPLAATAADAGAAATKQAATASAHAGM
                     ALGASDLATTEAHLHHVVNCLVGADGPGFDAKAADPCKGMGNGAITDAKGDAAMTTRL
                     KAALAAAEQGLKATTLDAAHAAARKAMDTLQAK"
     gene            919..1479
                     /locus_tag="VFM52_02350"
     CDS             919..1479
                     /locus_tag="VFM52_02350"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019465969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HET8764039.1"
                     /translation="MNTIKVAVLVGSLRKDSFNRRLARAVEGLMPSDFAFEYVQLGTV
                     PLYNQDFDSDYPPAATRLKHTIEAADAVLFVTPEYNRGVPGVLKNALDVASRPWGTNS
                     FGGKPGAVIGASIGATGSALAQQHLRNSLVFLDIAVMAQPEVFVQFKDDGPVDAEGHI
                     TNEGTKKFLQGFADRYAAWVRHHLKK"
     gene            complement(1498..>3112)
                     /gene="ppk1"
                     /locus_tag="VFM52_02355"
     CDS             complement(1498..>3112)
                     /gene="ppk1"
                     /locus_tag="VFM52_02355"
                     /EC_number="2.7.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019465970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009358 - polyphosphate kinase complex
                     [Evidence IEA];
                     GO_function: GO:0008976 - polyphosphate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006799 - polyphosphate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="polyphosphate kinase 1"
                     /protein_id="HET8764040.1"
                     /translation="LLVNKSLNFIVELEGVDAFGRDSGLAILPAPRVLPRIMCLPDDI
                     CEGGENYVLLSSIIHAHAGELFPGMTVLGSYQFRLTRNADLAIDPEDVEDLAMTLRGE
                     LYARRFGDAVRLEVADNCPKELSAHLLKQFGLTANELYEVNGPVNLARLFRIANKVSY
                     PALQYPPFVPALPKALRQADNLFAAIAKQDVLLLHPYESFAPVVDLLRAAAKDPQVLA
                     IKQTLYRTGTHSEIVDALVDAARAGKEVTAVVELRARFDEESNLGLAARLQQAGATVI
                     YGVVGIKTHAKLMLIQRREGDALVRYAHLGTGNYHAANARIYTDYSLLTADPALCEDV
                     HKLFSQLTGMGKALRMKKLLQAPFTLKQGLLDLIAGETAHAAAGKPARILIKINALTD
                     PTMIRALYAASIAGVRIDLIVRGMCCLRPGVPGVSEHIRVRSVIGRFLEHSRAYWFAN
                     DGEPVLYLSSADLMERNLDRRVECAFPIASRKLQQRILGALEHYLADTSGAAELHADG
                     HYTPIKPASGEPPYDVQQQLLLKLSGAAG"
BASE COUNT          480 a         1021 c         1116 g          495 t
ORIGIN      
        1 accggcgcga acgcgtcacc atcccagtaa tggatgctgc gcggcttgag cgccggcggg
       61 tacgggtagc gggcgccgtg cgaaacccag ccgtcggcct gcagggcgac gctttcccgg
      121 ctgcggccga gatccagcga gcccttccag gtggtggcgc cggcggcgtg tgcggcgctg
      181 agcgccgccg cggtttcccg ggtcagcaat gggccggcgt agtgggtcaa gcgaagggtc
      241 cctgaaggcg ggatgcgagt gtacggcgtc gctttgcggt ttcctcactt cgggtgtcgc
      301 atagtccgcc ccttgcggca ggtgccgcgc cacgcgggag caagctcatg ggcaagcgtc
      361 tactgggatg tctttcagtc gcggcactgt tcgtggcatt gccgctggca gccacggcgg
      421 cggatgccgg cgccgccgcg acgaagcagg cggccacggc gagcgcgcac gccggcatgg
      481 cgctcggcgc cagcgacctt gcgaccacgg aggcgcattt gcatcacgtg gtgaactgcc
      541 tggtcggtgc ggacggcccc ggcttcgacg cgaaggcggc cgacccgtgc aagggcatgg
      601 gcaacggggc gatcaccgac gccaagggcg atgcggcgat gaccacgcgc ctcaaggcgg
      661 cactggccgc tgccgagcag gggctcaagg ccaccacgct ggacgcggcc cacgcagcgg
      721 caaggaaggc gatggacacg ctgcaggcga agtaagcgac gcccgcgctt tgcgccgcac
      781 cggccgggtt tccccgcggt cgcgcagcgc gtggtgccct gcgcgcggcg catccacgcc
      841 gattgcgtgc ggtgcgcacg taccatggcc gcttcggcac cgcgtgggcg gcgcccatga
      901 tcgaggagac atgccactgt gaacaccatc aaggttgccg tgctggtggg gagcctgcgc
      961 aaagactcgt tcaaccgtcg cctggcgcgc gcggtcgagg gcttgatgcc gtcggatttc
     1021 gcgtttgagt acgtgcagct cggcaccgta ccgctctaca accaggattt cgacagcgac
     1081 tacccgccgg ccgcgaccag gctcaagcac acgatcgaag ccgctgacgc ggtgttgttc
     1141 gtcacccccg agtacaaccg cggcgtgcct ggcgtgctga agaacgcgct cgacgtcgcc
     1201 tcgcggccgt ggggcaccaa ctcgttcggc ggcaagccgg gggcggtgat cggtgcctcg
     1261 atcggcgcca ccggcagcgc gctcgcgcaa cagcacctgc gcaattcgct ggtgttcctc
     1321 gacatcgcgg tgatggcgca gcccgaggtg ttcgtgcagt tcaaggatga cggtccggtc
     1381 gacgcggagg gccacatcac gaacgaaggc acgaagaaat tcctgcaggg ctttgccgac
     1441 cgctatgccg cgtgggtgcg ccaccacctg aaaaagtgag cgcccgcggc gcggcggtca
     1501 tccggccgcg ccgctcaact tcagcagcaa ttgctgctgc acgtcgtagg gaggttcgcc
     1561 ggacgccggc ttgatcggcg tgtagtggcc gtcggcgtgg agttcggcgg cgccgctggt
     1621 gtcggccagg taatgttcga gcgcgccgag gatgcgctgc tgcagcttgc ggctggcgat
     1681 cgggaacgcg cactccaccc ggcggtcgag gttgcgttcc atcaggtcgg cgctggacag
     1741 gtacagcacc ggctcgccgt cgttggcaaa ccagtaggcg cggctgtgct cgaggaagcg
     1801 gccgatcacc gagcgcacgc ggatgtgctc ggagacgccc ggcacgccgg gacgcaggca
     1861 gcacatgccg cgcacgatga ggtcgatgcg cacgccggcg atgctggcgg catacagcgc
     1921 gcggatcatc gtggggtcgg tcagcgcgtt gatcttgatg aggatgcgcg ccggcttgcc
     1981 ggccgccgca tgcgcggtct cgccggcaat caggtcgagc aggccctgct tcagcgtgaa
     2041 cggcgcctgc agcagcttct tcatgcgcag tgccttgccc atgccggtca actggctgaa
     2101 cagcttgtgc acgtcctcgc acagcgcagg gtcggcggtg agcaggctgt agtcggtgta
     2161 gatccgcgcg ttcgccgcgt ggtagttgcc ggtgccgaga tgcgcgtagc gcaccagcgc
     2221 gtcgccttca cggcgctgga tcagcatcag cttggcgtgg gtcttgatgc cgactacgcc
     2281 gtagatgacg gtggcgccgg cctgctgcag gcgcgcggcc aggccgaggt tcgactcctc
     2341 gtcgaagcgc gcacgcagct cgaccaccgc ggtcacctcc ttgccggcgc gcgcggcgtc
     2401 gaccagcgcg tcgacgattt ccgaatgcgt gccggtgcgg tacagcgtct gcttgatcgc
     2461 cagcacctgc ggatccttcg ccgccgcgcg cagcagatcc accaccggcg cgaatgattc
     2521 ataggggtgc agcagcagca cgtcctgctt cgcgatcgcg gcaaacaggt tgtccgcctg
     2581 gcgcagcgcc ttgggcagcg ccggcacgaa gggcgggtat tgcagcgccg ggtagctgac
     2641 cttgttggcg atgcgaaaca ggcgcgcgag gttcaccggc ccgttcacct cgtacagctc
     2701 gttcgcggtc aggccgaatt gcttcagcag atgcgcgctc agctccttcg ggcagttgtc
     2761 cgccacctcc agccgcacgg cgtcgccgaa gcggcgcgcg tagagctcgc cgcgcagcgt
     2821 catcgcgagg tcttcgacat cttccgggtc gatcgcgagg tcggcgttgc gggtcagccg
     2881 gaactggtag ctgccgagca ccgtcatgcc ggggaacagc tcgccggcgt gggcgtggat
     2941 gatcgacgac agcagcacgt agttttcgcc gccttcgcag atatcgtccg gcaggcacat
     3001 gatgcgcgga agcacgcgcg gggcgggcag gatggccagg cccgaatcgc gcccgaaggc
     3061 gtcaacgcct tccagctcga cgatgaagtt caggctcttg ttgaccagca gc
//
LOCUS       DASSVL010000142         2029 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_342154, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000142 DASSVL010000000
VERSION     DASSVL010000142.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2029)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2029)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2029
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_342154"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..351)
                     /locus_tag="VFM52_02360"
     CDS             complement(<1..351)
                     /locus_tag="VFM52_02360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017155936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1-acyl-sn-glycerol-3-phosphate acyltransferase"
                     /protein_id="HET8764041.1"
                     /translation="MLEPLVARSLTGFIRLLTGSRVFWSEPLAPGRRVYYGNHSSHGD
                     FVLIWSALPPPLRAQARPVAAAEYWRRGALRRYLIRRVFKGVLVERDAAQRTEDPVAT
                     MAAAIEAGSALILFP"
     gene            complement(397..1008)
                     /locus_tag="VFM52_02365"
     CDS             complement(397..1008)
                     /locus_tag="VFM52_02365"
                     /EC_number="2.7.8.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003213515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0016780 - phosphotransferase activity, for
                     other substituted phosphate groups [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-alcohol phosphatidyltransferase family
                     protein"
                     /protein_id="HET8764042.1"
                     /translation="MPSVYDLKPRFQALLRPLVQRMAVAGIRANQVTVAAMLASLLVG
                     LAVGRTAGGHRWVWGLLPLWLLLRMALNAIDGMLAREHGQASRLGAVLNELGDVVADA
                     GLYLPLALTPDFSLWPLAVFVLLAVLTEMTGVIGVQIGASRRYDGPLGKSDRALVFGV
                     LGLLLALGVPGGPWQDGLVWLLACLGALTVLNRARAALREPGA"
     gene            complement(1112..1866)
                     /locus_tag="VFM52_02370"
                     /pseudo
     CDS             complement(1112..1866)
                     /locus_tag="VFM52_02370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005927840.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="Bax inhibitor-1/YccA family protein"
BASE COUNT          349 a          769 c          651 g          260 t
ORIGIN      
        1 ggggaacagg atcagcgcgc tgcccgcctc gatcgccgcc gccatcgtgg ccaccggatc
       61 ctcggtgcgc tgcgcggcgt cgcgctccac cagcacgccc ttgaacacgc ggcggatcag
      121 ataacggcgc aacgcgccgc ggcgccaata ctccgccgcc gccaccggac gcgcctgcgc
      181 gcgcaagggc ggcggcagcg ccgaccagat cagcacgaag tcgccgtgac tgctgtggtt
      241 gccgtaatac acccggcgtc ccggcgcgag cggctcgctc cagaacacgc ggctgcccgt
      301 gagcaggcga atgaaaccgg tcagcgaccg ggctaccagc ggttcaagca tgcgtcctcc
      361 atggccttcg ggcagttgcc cgccacgccg tcgatgtcat gcgcctggtt cgcgcaaggc
      421 cgcgcgcgcc cggttcagca ccgtcagcgc gcccaggcag gccagcagcc acaccaggcc
      481 atcctgccag ggcccgcccg gcacccccag cgccagcagc aagccgagca cgccgaacac
      541 cagcgcgcgg tcgctcttgc ccagcgggcc gtcataacgg cgcgaggcgc cgatctgcac
      601 gccgatcacc ccggtcatct cggtcagcac ggccagcagg acaaatacgg ccagcggcca
      661 cagcgaaaaa tccggcgtca gcgcgagcgg caggtacagc ccggcatcgg ccaccacgtc
      721 gccgagttca ttcagcaccg cgcccagcct cgaggcctgc ccatgctcgc gcgccagcat
      781 gccgtcgatc gcattgagcg ccatgcgcaa cagcagccac agcggcagca gcccccacac
      841 ccagcggtgc ccgccggccg tccggcccac ggccagcccc accagcaacg acgccagcat
      901 ggccgccacc gtcacctggt tcgcccggat acccgccacc gccatgcgct gcaccagcgg
      961 ccgcagcagc gcctggaagc gcggtttgag gtcatacacg ctgggcatgg cccggctccc
     1021 tgtcgtaccg gcggccgtcg cgacgcggcc ggccgtctcc ttgcgcgacg gcgcgctcgc
     1081 cgtcgctccc ctgtggaccg ccccggtcgc ctcagttgcg cgactgcagc ttggacagca
     1141 ggcgcagcat ctccagatac agccacacca gggtcacggt gagcgcgaag gcgccgtacc
     1201 actccatgtt tttgggtgcg ccggcgtgca cgccctgctc gatcatgtcg aaatcgagca
     1261 ccaggttcag cgcggcgatc accaccacgg cgaggctgaa caggatgccg atgccgctgg
     1321 acgcggtgat gaaaccgaag gagtggccga agaagcccat cacgaagctg gccaggtaca
     1381 ccagcatcac gccgccggtg gcggccacca cgccggcgcg gaacttgtcg gtgacgcgca
     1441 ccacgccgct gcggtaggcc acgagcagca ccgccatggt gccgaaggtg agcgccaccg
     1501 cctgcatcac gatgccggga tagcgcagct cgaagatcgc cgacagtgcg ccgacgaaca
     1561 cgccctcggc cagcgcgtac aacggcgcgg tgaccggcgc ccaggtctgc ttgaaggtgg
     1621 tggcgagcgc cagtaccagg cccacgatgg cgccgcccat cgccagcggc gccaccgccg
     1681 gcaggctttc cgcgccgtgg aagcggctcc agctgaaggc cgcgccgatc accaccagcg
     1741 ccagcatcag accggtcttg ttgaccgtgc cgttgaacgt catggcgttg gcgtcgcgct
     1801 ggaacaccgc gccgctggcg gcgtcgagga agatgttctt gttagtgccg gattgccgct
     1861 ttgcatgtct tgctcccgtc aggttgcgcc atcgtagcgc cgtttgcagc cgctgcacgc
     1921 gtgcggtgcg accatgatgg catcgcaacc ccaagggaca cccgcatgac cgcacagttc
     1981 cgcatcggcg accacgtgcg ctggaactcc gaggccggct acgtcagcg
//
LOCUS       DASSVL010000143         3215 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_921375, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000143 DASSVL010000000
VERSION     DASSVL010000143.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3215)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3215)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3215
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_921375"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1254)
                     /locus_tag="VFM52_02375"
     CDS             complement(<1..1254)
                     /locus_tag="VFM52_02375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015448008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HET8764043.1"
                     /translation="MHDIGFIRDLALVMLVAGATTILFQRLRQPVLLGYILAGVLIGP
                     HTPGMLVADAQAIDDISDLGVVLLMFTLGLEFSVRKLREVGAGVLLVALFEVGLMAWV
                     GIGLGRLFGWSGTDAVFLGAIIALSSTMVATRMLKEGGQQHLPFARMVVGLLVAEDVL
                     AIVMLTLLTAIAIGGTVEAGTALTLIGHLGLFVVVGMILGLLLLPWLIDYVAGFGRDE
                     TLLVATLGVCFGASLLAAWMGFSVALGAFLAGAVVAEARSVGRVLYLVEPLRDMFAAL
                     FFVAIGLKIDPVMLWQYALPALLIAAVVIVGKTLACSFGIFVVGNDARSALRSGLGMG
                     QIGEFSFVIAALGASLHATSDFIYPIAVAVSVVCMAVSPYLNRSGDRIADTVARRVPR
                     PLHLLAHTYSGWLENLTPVAENAAIA"
     gene            1399..1474
                     /locus_tag="VFM52_02380"
     tRNA            1399..1474
                     /locus_tag="VFM52_02380"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1432..1434,aa:Ala,seq:ggc)
     gene            1484..1559
                     /locus_tag="VFM52_02385"
     tRNA            1484..1559
                     /locus_tag="VFM52_02385"
                     /product="tRNA-Glu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1518..1520,aa:Glu,seq:ttc)
     gene            1590..1666
                     /locus_tag="VFM52_02390"
     tRNA            1590..1666
                     /locus_tag="VFM52_02390"
                     /product="tRNA-Asp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1624..1626,aa:Asp,seq:gtc)
     gene            complement(1721..2188)
                     /locus_tag="VFM52_02395"
     CDS             complement(1721..2188)
                     /locus_tag="VFM52_02395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008434794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1249 domain-containing protein"
                     /protein_id="HET8764044.1"
                     /translation="MSAVLDNRLNLLPGRFEFLMGLYAENYHRLTRLFAPQELAPGRY
                     VSDVDDGLNVHLDVQERHPYTLELELTYGFVDSHTGQRAPSAQLRMYTDAHVAEALHC
                     HPGQHLWQVLGPFAPVHTVFQHRLRMNGFLTRWLEYLAEQGHSLGTLEPQRDG"
     gene            complement(2197..3012)
                     /locus_tag="VFM52_02400"
     CDS             complement(2197..3012)
                     /locus_tag="VFM52_02400"
                     /EC_number="2.7.11.33"
                     /EC_number="2.7.4.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007511258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016776 - phosphotransferase activity,
                     phosphate group as acceptor [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA];
                     GO_process: GO:0006470 - protein dephosphorylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate, water dikinase regulatory protein"
                     /protein_id="HET8764045.1"
                     /translation="MQRTVFFISDSTGITAETIGNSILAQFEGLRFDKHRLPFVDDAH
                     KAEAAALRIKTHYAKTGERPIVVNTLADRALCEIVASSGALMLDVFAPFIGPLESELG
                     IKRSGRVNRSHGLVDFDKYEARINATNYALSHDDGIDVNYADADLILVGVSRSGKTPT
                     CLYMALHYGVCAANYPLTEEDLDNLELPVRLQPFKHRLFGLTIEPERLVQIREERRAG
                     SRYATLKQCRWELAQAERLMRQSGIPSLNTTHVSIEEIASKILARFGIERTMF"
BASE COUNT          597 a         1075 c         1037 g          506 t
ORIGIN      
        1 cgcgatcgcc gcgttctccg cgaccggcgt cagattctcc agccacccgc tgtaggtatg
       61 cgccaagagg tgcagcggcc gcggtacccg gcgggcgacg gtatcggcaa tgcggtcgcc
      121 ggaccggttg aggtatggcg acactgccat gcagacgacg gaaaccgcca ccgcgatcgg
      181 gtagatgaaa tcgctggtgg cgtgcagcga cgccccgagc gcggcgatca cgaacgagaa
      241 ctcgccgatc tgccccatgc cgaggcccga gcgcaacgcc gagcgcgcgt cgttgcccac
      301 cacaaagatg ccgaagctgc acgccagcgt cttgccgacg atgaccaccg ccgcgatcag
      361 cagcgccggc aacgcgtact gccagagcat caccgggtcg atcttgagtc cgatggcgac
      421 gaagaacagc gcggcgaaca tgtcgcgcag cggctcgacc aggtacagca cgcgtccgac
      481 gctgcgcgcc tcggccacca ccgcgccggc gaggaaagcc cccagcgcca cgctgaagcc
      541 catccacgct gccaacaggc tcgcaccgaa gcacacgcca agcgtcgcca ccagcagggt
      601 ctcgtcgcgg ccgaagccgg ccacgtaatc gatcagccac ggcaacagca gcaagccgag
      661 gatcatgccc acgacaacga acaggccgag atgaccgatc agggtcagcg cggtgccggc
      721 ctccaccgtg ccgccgatcg cgatcgccgt cagcagggtc agcatcacga tcgccagcac
      781 gtcctcggcc accagcaggc cgaccaccat gcgcgcaaac ggcaggtgct gctggccgcc
      841 ttccttcagc atccgcgtcg caaccatggt cgacgacaac gcgatgatcg cgccgaggaa
      901 caccgcgtcg gtgccgctcc agccgaacag gcgaccgagc ccgatgccga cccacgccat
      961 caggccaacc tcgaacagcg cgacgagcag cacgccggcg ccgacctcgc gcagcttgcg
     1021 cacgctgaat tccagcccca gcgtgaacat cagcagcacc acgccgaggt ccgagatgtc
     1081 gtcgatggcc tgcgcgtcgg ccaccagcat gcccggcgta tgcgggccga tcagcacgcc
     1141 ggccaggatg tagccgagca gcaccggctg gcgcaggcgc tggaacagga tggtggtcgc
     1201 ccccgccacc agcatcacca gggcgagatc gcggatgaaa ccgatgtcgt gcatgcgacc
     1261 ctcgctggcg gtggcgacaa cgagcttaaa cgatggcccg caccggtcgc gtgcgtgccg
     1321 gcgcggcaac gtcatccagt ccgaaaaaaa gcttgacgga accctcaccc gcacctattc
     1381 tttgcggctt ccagcggcgg ggccatagct cagctgggag agcgcctgca tggcatgcag
     1441 gaggtcggcg gttcgatccc gcctggctcc accaactcaa ttcgtcccca tcgtctagag
     1501 gcctaggaca tcaccctttc acggtgacga ccggggttcg aatccccgtg gggacgccat
     1561 gattggctgg caacgctggt cgcaaatgtg gagcggtagt tcagctggtt agaatgctgg
     1621 cctgtcacgc cggaggtcgc gggttcaagt cccgtccgct ccgccactca tcacgaagaa
     1681 cccgccgtcg gcgggttttt tgttgggcat gcaaaagcga tcagccgtcg cgctgcggct
     1741 ccagcgtgcc cagcgagtgc ccctgctcgg caaggtattc gagccagcgg gtgagaaagc
     1801 cgttcatgcg cagtcgatgc tggaacaccg tgtgcaccgg cgcgaacggc ccgagcacct
     1861 gccacaggtg ctggcccgga tggcaatgca gtgcctcggc cacgtgtgcg tcggtgtaca
     1921 tgcgcaactg cgcggacggc gcacgctgcc cggtatggct gtcgacgaag ccgtaggtca
     1981 gttccagctc gagcgtgtac gggtggcgtt cctgcacgtc gagatgcacg ttgaggccgt
     2041 cgtccacgtc cgacacgtag cggcccggcg ccagttcctg cggcgcgaac agccgcgtca
     2101 gccggtggta gttctcggca tacagcccca tcaggaactc gaagcgcccc ggcaagaggt
     2161 tcaagcgatt gtcgagtacg gcgctcatgg tggcagtcag aacatcgtgc gctcgatgcc
     2221 gaagcgggcg aggatcttgc tggcgatctc ctcgatcgag acgtgggtgg tattgaggct
     2281 ggggatgccg gattggcgca tcaggcgctc ggcctgcgcc agttcccagc ggcattgctt
     2341 gagtgtggcg tagcggctgc cggcgcgacg ttcctcgcgg atctgcacca gccgctccgg
     2401 ttcgatggtg aggccgaaca accgatgctt gaaaggttgc aggcgcacag gcaattccag
     2461 gttatccaga tcttcctcgg tgagcgggta attggcggcg cacacgccgt aatgcaaggc
     2521 catgtacagg caagtcggcg tcttgcccga gcgcgacacg ccgaccagga tcaggtcggc
     2581 atcggcatag ttcacgtcga tgccgtcgtc gtgcgacagc gcatagttgg tggcgttgat
     2641 gcgcgcctcg tacttgtcga agtcgaccag gccatgcgaa cggttcaccc ggcccgagcg
     2701 cttgatgccc agctccgatt ccagcggccc gatgaatggc gcgaacacat cgagcatcaa
     2761 cgcgccgctg ctggcgacga tctcgcacag cgcgcggtcg gccagcgtat tgaccacgat
     2821 cgggcgctcg ccggtcttgg catagtgggt cttgatgcgc agcgcagccg cctccgcctt
     2881 gtgcgcgtcg tcgacgaaag gcagccgatg cttgtcgaag cgcagccctt cgaactgcgc
     2941 aaggatgctg ttgccgatcg tctcggcagt gataccggtg gaatcggaga tgaaaaagac
     3001 cgtgcgttgc atcgcgtgtc ccgtggcatg agccgctgtt gcgcggcacc ttagcgcatg
     3061 cctgcgaggc tgtcccggca gcccgacccc gaccatcacc tgactggtat gcagttggcg
     3121 cggcatctgg cggcattggt cttcttgtgc cgcaccgcat cggcggcgga caataccagt
     3181 ccttcgcaga cggctttctg cctagacata gcgcc
//
LOCUS       DASSVL010000144         4552 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_483227, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000144 DASSVL010000000
VERSION     DASSVL010000144.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 4552)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4552)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4552
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_483227"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1980)
                     /locus_tag="VFM52_02405"
     CDS             complement(<1..1980)
                     /locus_tag="VFM52_02405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008213539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA];
                     GO_function: GO:0015343 - siderophore-iron transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015891 - siderophore transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent siderophore receptor"
                     /protein_id="HET8764046.1"
                     /translation="MKLTRTPLLIALLTALVPPLHAADSTPQTTDLAPVKVEATTHAE
                     THATKLGPWGAAAPKDTPASITVIARPQLDAAQVRTLSELARQDAALGDSYAAVGYYQ
                     DLSIRGYPLDLATGLRVNDRTIAGEQRIALENKEEVQVLAGLAGIDAGVVEPGGLLNF
                     VTKRPADVRNVTIGTDSHGSRYTALDVGGWLTPTFGLRGNFAWEDTHSYVEHANGRRN
                     FYSLAADWRITPNALLELDSDYQTSAQRSVSGYQLLGGTVIPAHADATRMLGYEPWQL
                     PVSIESSNTSARFRYTFNDAWRLNLAAGHSRSAINDNVAFAYGCFYQAVCANTVTQGA
                     FFAPDGGYDVYDYRSPGDVRLDDEARATLSGRFDTGALGHELSFGLDAFHRANDRRAE
                     VFDYVGSANISERDPPYFPPSPNQPGSSTRRADSWQRSVFALDRVHLGEAWQVVIGEH
                     FTRLIDRAWGSDATLERNTRFSRALPQAAVLWQPAGRLTLYTSYSEGMSLGEEAPYWT
                     SNSGDTLAPRHSRQFEAGAKFAPNDALALDAAVYRIRQPYQFAAPDATPAGYTFVQHG
                     EEVHTGLELSAHGQLTGNLRVDASASFIDARVRNTGIAMLEGHQVQNVPRVRATAHLD
                     YRLPALPALSLMGGWRYAAPNVATSDGRIRVPAYNV"
     regulatory      complement(2048..2143)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            complement(2174..3298)
                     /locus_tag="VFM52_02410"
     CDS             complement(2174..3298)
                     /locus_tag="VFM52_02410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017460940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphotransferase"
                     /protein_id="HET8764047.1"
                     /translation="MIRTGHVHGLAGDDMPADWPPLTADELSRLLARHPALGAVQAIA
                     WNSPRPLSAAALVETRGERVFIKRHHQRVRSATTLAEEHAFAAWLRERGVPVPRVLAD
                     ADGHTATTLGEWVYEVQAPAHGIDVYRDTVSWVPPMVPGHAHAAGGMLARLRAAAADY
                     AAPQRSTHVLVARSELLAADDPVSALAAQLPDRCGLAAYLATRDWRHELAAAIAPFHA
                     AVHARVQAQPRCWTHGDWHVSNLCWSGVGADARISDVLDFGLAARTFALFDLATAIER
                     NAIAWLEGPDDRARPRIAQALIDGYRDVQPLDRDALAFVADLLPVVHLDFALSEVEYF
                     SAITGSRAHADVAWDAFLRGHAAWFRTAPGRQLLAAIRAA"
     gene            3416..4321
                     /locus_tag="VFM52_02415"
     CDS             3416..4321
                     /locus_tag="VFM52_02415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008213542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AEC family transporter"
                     /protein_id="HET8764048.1"
                     /translation="MAALLLLFVCLILGALVRRFAHPPDGTVRGINWWVLNVALPALV
                     LELIPKVALDPQLWFLVVAMWLTFGGAWLLFGLLGPRLGWSRQRTGALILVCGLGNTA
                     YMGYPMIAALRGESGLKLAVVADQLGASPVLASLAVVVACVYAGRDVHPRMIARRILG
                     FPAFIALIVGIVVGRLGGWPPMFDGVFKPIGETLTPLALFSVGMQFRLRGSRGQWGAA
                     ACGLGWKLVAAPALCWALAAATGVGGPVMMAGVLQAAMAPMVSATILADEYRLDPELA
                     NTVLGVGIVLSLLTVPLANHWLPGG"
     gene            4409..>4552
                     /locus_tag="VFM52_02420"
     CDS             4409..>4552
                     /locus_tag="VFM52_02420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007082283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S4 domain-containing protein"
                     /protein_id="HET8764049.1"
                     /translation="MTELRADVWLWAARFFKTRSLAKQAIEGGKIEVNHLGCKPAKLL
                     HVGD"
BASE COUNT          612 a         1472 c         1725 g          743 t
ORIGIN      
        1 cacgttgtac gccggcacgc ggatgcggcc gtcgctggtg gcgacgtttg gcgcggcgta
       61 gcgccagccg cccatcaatg acagcgcggg cagcgccggc aggcggtaat cgaggtgggc
      121 ggtggcgcgc acgcgcggca cgttctgcac ctggtggcct tccagcatcg cgatgccagt
      181 gttccggacg cgcgcgtcga tgaagctggc gctggcgtcc acgcgcaggt tgccggtgag
      241 ctggccgtgc gcggaaagct cgaggccggt gtgcacctcc tcgccgtgct ggacgaaggt
      301 gtagccggcc ggcgtcgcgt ccggcgcggc gaactggtag ggctggcgga tgcggtagac
      361 cgccgcgtcg agcgcgagtg catcgttcgg cgcgaacttg gcccccgcct cgaactggcg
      421 cgagtggcgg ggcgcgaggg tatcgccgct gttcgaggtc cagtacggcg cctcttcgcc
      481 gagcgacatc ccctcgctgt agctggtgta gagcgtgagc cggccggccg gttgccacag
      541 cacggcggcc tgcggcaggg cgcgggagaa gcgggtgttg cgttcgagtg tggcgtcgct
      601 gccccatgcg cggtcgatga gccgcgtgaa gtgctcgccg ataacgacct gccacgcctc
      661 gcccaggtgc acgcgatcga gcgcgaacac gctgcgctgc caactgtccg cgcggcgcgt
      721 cgacgagccg ggctggttgg gcgagggcgg gaaatacggc ggatcgcgtt cgctgatgtt
      781 ggcgctgccg acatagtcga atacctccgc gcgacggtcg ttggcgcggt ggaaggcgtc
      841 cagcccgaag ctcagctcgt ggccgagcgc gccggtgtcg aaacggccgc tgagcgttgc
      901 gcgcgcctcg tcatccaggc ggacgtcgcc cggactgcgg tagtcgtaca cgtcgtagcc
      961 gccgtccggt gcgaagaatg caccctgcgt gaccgtgttc gcgcacacgg cctggtagaa
     1021 gcagccgtag gcgaacgcga cgttgtcgtt gatcgcgctg cggctgtgcc cggcggcaag
     1081 gttcaaccgc caggcgtcgt tgaacgtgta gcgaaagcgc gcgctggtgt tgctgctctc
     1141 gatgcttacc ggcagttgcc acggctcgta gccgagcatg cgggtggcgt cggcatgggc
     1201 cgggatcacc gtgccgccga gcagctggta gccggaaacc gaacgctgcg cgctggtctg
     1261 gtagtcgctg tccagttcca gcaacgcgtt tggcgtgatg cgccagtcgg ccgcgagcga
     1321 atagaaattg cgccggccgt tggcgtgttc gacgtaggaa tgggtgtcct cccaagcgaa
     1381 gttgccgcgc aggccgaagg tcggcgtgag ccagccgccc acgtccagtg cggtgtagcg
     1441 cgagccgtgc gagtcggtgc cgatggtcac gttgcgcacg tcggccgggc gcttggtgac
     1501 gaagttcagc aggccgcccg gctcgaccac gccggcatcg atcccggcca ggccggcaag
     1561 cacctgcact tcctccttgt tttccagtgc gatgcgctgc tcgccggcga tggtgcggtc
     1621 gttcacgcgc aggccggtgg cgaggtcgag cggatagccg cggatggaca gatcctggta
     1681 gtagccgacc gcggcatagc tgtcgccgag cgcggcgtcc tggcgcgcca gttcgctcag
     1741 cgtgcgcacc tgggcggcgt cgagctgggg ccgcgcgatc acggtgatgc tggcaggggt
     1801 gtccttgggc gcggcggcgc cccacggacc gagtttcgtc gcgtgcgtct cggcgtgggt
     1861 cgtggcctcg actttcaccg gggcgaggtc ggtggtctgc ggcgtgctgt ccgcggcatg
     1921 cagtggtggc accagcgccg tgagcagggc gatcagcagg ggcgtgcggg tgagtttcat
     1981 cgtcgtcgct ttcgtgggga tggggcgaag cgacggcagc cgcgcgcgcc cgtagtcggg
     2041 acgcatgcaa gctctggatc aagctcccta cgccggtctt aaccgggtca ggttccaagg
     2101 gactctctca gcccggcaac gccgggcacc cccgcttcaa gcgcgcatta caccacgaat
     2161 ggacggccgt gcgtcaagcc gcgcggattg cggcgagcag ctggcgcccc ggtgcggtgc
     2221 ggaaccatgc ggcgtggccg cgcaaaaacg cgtcccacgc gacgtcggcg tgcgcgcgcg
     2281 agccagtgat ggcgctgaag tattcgactt cggaaagcgc gaaatccagg tggacgacgg
     2341 gcagcaggtc ggcaacgaag gcgagcgcgt cgcggtcgag cggctgcacg tcgcgatagc
     2401 cgtcgatcag cgcctgggcg atgcgcggtc gggcgcggtc gtccgggcct tcgagccacg
     2461 cgatcgcatt gcgttcgatc gcggtggcga ggtcgaacag cgcgaaggtg cgcgcggcga
     2521 gcccgaaatc cagcacgtcg ctgatccggg catcggcacc gacgccgctc cagcacaggt
     2581 tcgacacgtg ccagtcgccg tgcgtccagc agcgcggctg ggcctgcacg cgtgcgtgga
     2641 cggcggcgtg gaacggtgcg atcgcggcgg caagttcgtg ccgccagtcg cgggtggcga
     2701 ggtaggcggc caggccgcat cgatcgggga gttgcgccgc caatgcggac accgggtcgt
     2761 ccgccgcgag cagttcgctg cgtgcgacca gcacgtgcgt gctgcgttgg ggggcggcgt
     2821 aatccgctgc tgcggcgcgc aggcgcgcga gcatcccgcc ggcggcatgc gcgtgcccag
     2881 gcaccatcgg cggcacccac gacacggtgt cccgatagac gtcgatgccg tgggccggcg
     2941 cctgcacctc gtacacccat tcgccaagcg tcgtcgccgt gtggccgtcc gcatccgcga
     3001 gcacgcgcgg caccggtacg ccgcgctcgc gcagccaggc ggcgaacgca tgttcctcgg
     3061 ccagcgtcgt cgcactgcgc acgcgctggt gatggcgctt gatgaacacc cgctcgccgc
     3121 gcgtctcgac cagcgcggca gccgacagcg gccgcggact gttccacgcg atggcctgca
     3181 cggcgcccag cgcggggtga cgcgccagca ggcgggaaag ttcatccgcc gtcaacggtg
     3241 gccagtcggc cggcatgtcg tcgccggcaa ggccgtgcac gtggccggtg cggatcatgg
     3301 gtggcgggga agcaaatggt gggtcacggc gcggcattat ccccgactcg cagcgcgctt
     3361 tcgcgcccgg cgtgcatcgc gtctaatgca tggctttcgt cccgcggaaa ttccgatggc
     3421 cgcgttgttg ctgctgttcg tatgcctgat cctcggcgcg ctggtgcgcc gcttcgcgca
     3481 cccgcccgac ggcacggtac gcggcatcaa ctggtgggtg ctgaacgtgg cgctgccggc
     3541 gctggtgctg gagctgatcc cgaaggtcgc gctcgatccg cagctgtggt ttctcgtggt
     3601 cgcgatgtgg ctgaccttcg gtggcgcgtg gctcctgttc ggcctgctgg ggccgcgcct
     3661 gggctggtcg cggcaacgca cgggggcgct gatcctggtg tgcgggctgg gcaacaccgc
     3721 gtacatgggc tacccgatga tcgcggcgct gcgcggcgag tccggcctca agctggcggt
     3781 ggttgccgac cagctcggcg cgtcgccggt gctggcgtcg ctcgcggtcg tcgtggcctg
     3841 cgtgtatgcc gggcgcgacg tgcatccgcg catgatcgcg cggcgcatcc tcggcttccc
     3901 cgcgttcatc gcgctgatcg tcggcatcgt cgtcggccgg ctgggcggtt ggccgccgat
     3961 gttcgacggc gtgttcaagc cgatcggcga aacgctgacg ccactcgcgc tgttctccgt
     4021 cggcatgcag ttccgcctgc gcggcagccg tggccaatgg ggcgcggcgg cgtgcgggct
     4081 cggctggaaa ctcgtggccg cgccggcgtt gtgctgggcg ctggcagccg caaccggtgt
     4141 cggcggcccg gtgatgatgg ccggcgtgct gcaggccgcg atggcgccga tggtgtcggc
     4201 gaccatcctc gccgacgagt accggctcga tccggaactg gccaataccg tgctcggggt
     4261 cggcatcgtg ttgtcgctgt tgacggtgcc gctggccaac cactggctgc cgggcggttg
     4321 aagtcgccgg gaaaagtgtc acgcgggcgc gcaatccgcg gccggatttc acgataatgc
     4381 tggcgtgaac gatgccgcgg cccctgcctt gactgaactg cgtgccgacg tgtggctgtg
     4441 ggcggcgcgg ttcttcaaga cgcgcagcct cgcgaagcag gcgatcgagg gcggcaagat
     4501 cgaggtcaac cacctggggt gcaagccggc gaagttgctg cacgtgggcg ac
//
LOCUS       DASSVL010000145         4066 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_455035, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000145 DASSVL010000000
VERSION     DASSVL010000145.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 4066)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4066)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4066
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_455035"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..301)
                     /locus_tag="VFM52_02425"
     CDS             complement(<1..301)
                     /locus_tag="VFM52_02425"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002812253.1"
                     /note="Catalyzes the only substrate-level phosphorylation
                     in the TCA cycle; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate--CoA ligase subunit alpha"
                     /protein_id="HET8764050.1"
                     /translation="MSVLVNKNTKVIVQGFTGTQGTFHAEQMIEYGTKVVGGVTPGKG
                     GTQHLGLPVFDTVAEAVKQTGADTSCIFVPPLGAADSILEAIGAGIKLAICITEGI"
     gene            complement(325..1494)
                     /gene="sucC"
                     /locus_tag="VFM52_02430"
     CDS             complement(325..1494)
                     /gene="sucC"
                     /locus_tag="VFM52_02430"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019183942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-forming succinate--CoA ligase subunit beta"
                     /protein_id="HET8764051.1"
                     /translation="MNFHEYQAKQLFNDYGIAVPPGRVARTPEEAVDAAKAIGGDFWV
                     VKAQIHAGGRGKAGGVELAKTLDQVREYAKGMLGTKMETYQSAGVALPIDSVLVTQAT
                     DIAKELYLSVLVDRSSKSITFIASSEGGVEIEKTAEENPDAIKTLHVNYVQGLQAYEC
                     RDMGFALGLNAKQVGQLTKIMLGLFKLFNEKDLSLVELNPLAIMTDGNLAVLDGKVNS
                     DDNATFRHPDLAAMRDIRQEDETEVKASQHDLNYVTMDGNIGCMVNGAGLAMATMDVI
                     KLEGGEPANFLDVGGGANKERVTEAFKLILSSDKVKAIFVNIFGGIVRCDMIAEGIIA
                     AVKEVGVQVPVIVRLEGTNVAEGKALLKNSGLAIIPADDINDGAKKAVEAVKNAA"
     gene            1783..2085
                     /locus_tag="VFM52_02435"
     CDS             1783..2085
                     /locus_tag="VFM52_02435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020850959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HigA family addiction module antitoxin"
                     /protein_id="HET8764052.1"
                     /translation="MTKKLAPLHPGEVLLHEFLEPMGITRYRLAKEIGVPPQRIGDIV
                     AGKRSITADTDLRLCRYFGLSDGYWLRGQARYDTECARDALGPELARIHPLPRKAA"
     gene            2125..3705
                     /locus_tag="VFM52_02440"
     CDS             2125..3705
                     /locus_tag="VFM52_02440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005992832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HET8764053.1"
                     /translation="MGDNGIAAAQYRDLYFYSLYRVLEAGLLVLILFGPISELVPEPA
                     HPLLGKATGVAYLALAPVLLTWAMRKVALRWQVLVGIVVDVSVAMLAIHAIPAAASGV
                     ALMLVFNVGATAMLLPLRYGLAGGALAGVAMIAEYVWTYLSPAQVNDRPMAEPLMFAV
                     SFLSIAMLCYLLGRQLRESQALAERRGGEIADLAAVNELIIRRMRTGVLLVDGGGHIR
                     LANEAALLQLGDQGGDRRLASLSPPLAERLASWRRTGSSDDTPLEVGADRVGVLPRFV
                     RLFAHDEAALVFLDDTALVSRRAESLTLATLGRFSASLAHEIRNPLAAINYATQLLQE
                     STDIGEADQRLLEIIHAQCQRTNGIVESVLGLARRERASADNVDLGAFVRRFVDDYRQ
                     VLPAESGHLDAAGAERMHALVDPRHLQQVLTVLVQNALTHGHRPADPAQVSIVVGQAG
                     GRPVLDVCDEGPGIPEAVRAQLFRPFFTTSEYGTGLGLYIARELCTANEATLEYVPRP
                     RGGCFRIALPDAHAMLPA"
     gene            3755..>4066
                     /locus_tag="VFM52_02445"
     CDS             3755..>4066
                     /locus_tag="VFM52_02445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010366202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HET8764054.1"
                     /translation="MSEPGAVPAPSALIVDDEHDIRELLVLTLGRMGLRTDTAANLAQ
                     ARAQLARNRYDLCLTEMRLPDGSGQEIIGVIAAQYPETPVAMITAYGNVDAAVDALKA
                     GA"
BASE COUNT          575 a         1457 c         1354 g          680 t
ORIGIN      
        1 ggattccctc ggtgatgcag atggcgagct tgatgcccgc gccgatggct tcgaggattg
       61 aatccgcggc gcccagcggc ggcacgaaga tgcacgacgt gtccgcgccg gtttgcttca
      121 ccgcttcggc gacggtgtcg aagaccggca gtccgaggtg ctgcgtgccg cccttgccgg
      181 gcgtgacgcc gccgacgacc ttggtgccgt actcgatcat ctgctcggca tggaaggtgc
      241 cctgggtgcc ggtgaagccc tggacgatga ccttggtgtt cttgttgacg aggacgctca
      301 tcgaattcgt tttccttgca gggctcaggc ggcgttcttg acggcttcga cggccttctt
      361 cgcgccgtcg ttgatgtcgt cggcggggat gatggcgagg ccggagttct tcagcagcgc
      421 cttgccctcg gccacgttcg tgccctccag gcgcacgatc accggcacct gcacgcccac
      481 ttccttgacc gcggcgatga tgccctcggc gatcatgtcg cagcggacga tgccgccgaa
      541 gatgttgacg aagatcgcct tcaccttgtc gctcgacagg atcagcttga aagcctcggt
      601 cacgcgctcc ttgttggcgc cgccgccgac gtcgaggaag ttcgcgggct cgccgccttc
      661 cagcttgatc acgtccatgg tcgccatcgc caggcccgcg ccgttgacca tgcagccgat
      721 gttgccgtcc atggtcacgt agttgaggtc gtgctggctg gccttgacct cggtctcgtc
      781 ctcctggcgg atgtcgcgca tcgcggcgag gtccgggtgg cggaaggtgg cgttgtcgtc
      841 ggagttgacc ttgccgtcga gcaccgcgag gttgccgtcg gtcatgatcg ccagcgggtt
      901 gagctcgacc agcgacaggt ccttctcgtt gaacagcttg aacaggccca gcatgatctt
      961 cgtcagctgg ccgacctgct tcgcgttgag gcccagggcg aagcccatgt cgcggcactc
     1021 gtaggcctgc aggccctgca cgtagttcac gtgcagcgtc ttgatcgcgt ccgggttctc
     1081 ctcggcggtc ttctcgatct ccacgccgcc ctcggacgag gcgatgaagg tgatcgactt
     1141 gctcgagcgg tccaccagca ccgagaggta cagctccttg gcgatgtcgg tggcctgggt
     1201 caccagcacg ctgtcgatcg gcagcgcgac gccggccgac tggtaggtct ccatcttcgt
     1261 gccgagcatg cccttggcgt actcgcgcac ctggtccagc gtcttcgcca gctcgacgcc
     1321 gccggccttg ccgcggccgc cggcgtggat ctgcgccttg accacccaga agtccccgcc
     1381 gatcgccttg gccgcgtcca cggcctcctc gggggtgcgg gcgacgcgcc cgggcggcac
     1441 cgcgatgccg tagtcgttga agagctgctt ggcctggtat tcgtggaagt tcatcgatcg
     1501 tccggctgga gtggggaccc ggcggggtct ggacagacaa ctgagcccga tattgtacgc
     1561 ccccgctccg ggcccacgct tccggcgccg cccgcggaac acgcgccgcg cattaacgat
     1621 tgacgttaat aacgcgcctc gttaatatgc tcccggtggc gatcaaatcc ttccgctgca
     1681 aggacaccag ggcgctgttc aacgatcaat accgcatctg ttttcgctgg accggcacgg
     1741 acgccgagga cgtcgagatc gtcgactacc actgaggccg ccatgaccaa gaagctcgca
     1801 cccctccatc ccggcgaagt cctcctccac gagttcctgg agccgatggg catcacccgc
     1861 taccgcctgg cgaaggagat cggcgtgccg ccgcagcgca tcggcgacat cgtcgcaggc
     1921 aagcgttcga tcaccgcgga caccgacttg cgcctgtgcc gctatttcgg cctgtcggat
     1981 ggctactggc tgcgcggcca ggcccgctac gacaccgaat gcgcgcgcga cgccctcggc
     2041 ccggaactgg cgcgcatcca ccctcttccg cgcaaggccg cataatcggg gagcgccacc
     2101 cgcgtggcgc cggcaggggg acccatgggc gacaacggca tcgccgcggc gcagtaccgc
     2161 gacctctact tctacagcct gtaccgggtg ctggaggccg gcctgctggt cctgatcctg
     2221 ttcggcccca tcagcgagct cgtgccggag ccggcccacc cgctgctggg caaggcgacc
     2281 ggcgtcgcct acctcgccct ggcgccggtg ctgctgacct gggccatgcg caaggtcgcc
     2341 ctgcgctggc aggtgctggt gggcatcgtc gtcgacgtat ccgtcgcgat gctggcgatc
     2401 cacgccatcc cggcggcggc ctcgggcgtg gccctgatgc tggtgttcaa cgtcggcgcg
     2461 accgcgatgc tgctgccgct gcgctacggc ctcgcgggcg gcgcgctggc gggcgtggcg
     2521 atgatcgccg aatacgtctg gacctatctg tcgccggcgc aggtcaacga ccggccgatg
     2581 gccgagccgc tgatgttcgc ggtgagcttc ctctcgatcg cgatgctgtg ctacctgctc
     2641 ggccggcagc tgcgcgagag ccaggcgctg gccgagcgcc gcggcggcga gatcgccgac
     2701 ctggccgcgg tcaacgagct gatcatccgg cgcatgcgga cgggcgtgct gctcgtggac
     2761 ggcggcggcc acatccgcct cgccaacgag gccgcgctgc tgcagctggg cgaccagggc
     2821 ggcgaccgcc ggctcgccag cctgtcgccg ccgctggccg agcgcctcgc cagctggcgg
     2881 cgcaccggca gcagcgacga cacgccgctg gaagtcggcg ccgaccgcgt cggcgtgctg
     2941 ccgcgcttcg tgcgcctgtt cgcgcacgac gaggccgcgc tggtgttcct ggacgacacc
     3001 gcgctggtct cgcggcgcgc cgaatcgctg acgctggcga ccctgggccg gttctccgcc
     3061 agcctcgccc acgagatccg caacccgctg gcggcgatca actacgccac ccagctgctg
     3121 caggaatcca cggacatcgg cgaagccgac cagcgcctgc tcgagatcat ccacgcgcag
     3181 tgccagcgca ccaacggcat cgtcgaaagc gtcctcggcc tggcgcggcg cgaacgggcc
     3241 agcgccgaca acgtcgacct gggcgccttc gtgcgccgct tcgtcgacga ctaccggcag
     3301 gtgctgcccg ccgaatccgg ccacctcgac gccgccggcg ccgagcgcat gcacgccctc
     3361 gtcgatccgc ggcacctgca gcaggtgctg acggtgctgg tccagaacgc gctgacgcac
     3421 ggccaccggc ccgccgatcc ggcgcaggtc tccatcgtgg tcggtcaggc cggcgggcgg
     3481 cccgttctcg acgtgtgcga cgaaggcccg ggcatccccg aggccgttcg cgcgcagctc
     3541 ttccggccct tcttcaccac ttccgagtac ggcaccggcc tcggcctcta catcgcgcgc
     3601 gagctgtgca cggccaacga ggcgacgctg gaatacgtgc cgcgaccgcg cggcggctgc
     3661 ttccgcatcg ccctgcccga cgcgcacgcg atgctgccgg catgagccac gcggcgcact
     3721 tgggcgcggc gctgcgctgc gttaaggttc gggcatgagc gaacccggcg ccgtccctgc
     3781 ccccagcgca ctgatcgtcg acgacgagca cgatatccgc gaactgctgg tgctcaccct
     3841 gggacggatg ggcctgcgca ccgacaccgc cgccaacctc gcgcaggcgc gcgcgcagct
     3901 ggcgcgcaac cgctacgacc tgtgcctgac cgagatgcgc ctgccggatg gttccggcca
     3961 ggagatcatc ggcgtgatcg ccgcgcaata tccggaaacg ccggtcgcga tgatcaccgc
     4021 ctacggcaac gtcgacgccg ccgtcgacgc gctcaaggcc ggcgcg
//
LOCUS       DASSVL010000146         4038 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_511512, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000146 DASSVL010000000
VERSION     DASSVL010000146.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 4038)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4038)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4038
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_511512"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1031)
                     /gene="glmS"
                     /locus_tag="VFM52_02450"
     CDS             complement(<1..1031)
                     /gene="glmS"
                     /locus_tag="VFM52_02450"
                     /EC_number="2.6.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015446783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004360 - glutamine-fructose-6-phosphate
                     transaminase (isomerizing) activity [Evidence IEA];
                     GO_process: GO:0006040 - amino sugar metabolic process
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--fructose-6-phosphate transaminase
                     (isomerizing)"
                     /protein_id="HET8764055.1"
                     /translation="MCGIVAAVAQRDVVPILLAGLHALEYRGYDSAGLAVLADGKLER
                     LRTPGKVVKLDALWKAADLHSHTGIAHTRWATHGAPTEANAHPHVSRDTVAVVHNGII
                     ENHVELRRELETAGYAFTSETDTEVIAHLVHRLMAEGAGLRDAVIAATRRLRGAYAIA
                     VLHRDHPGHVVGARRGSPLCVGVGIGESFLGSDVQALIGVTNKIVYLEDGDVVEITPD
                     THTVIAADGSEVTRTLRESDLSRDAVERGRFRHYMLKEIFEQPTAVANTFEGRISDGR
                     VLPNIFGIDADTLLRRVRQVHIVACGTSFHAGMVAKYWLEGIAGVPCAVEVASEYRYR
                     TVVVPPDTL"
     gene            complement(1121..3565)
                     /locus_tag="VFM52_02455"
     CDS             complement(1121..3565)
                     /locus_tag="VFM52_02455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013533849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomannomutase/phosphoglucomutase"
                     /protein_id="HET8764056.1"
                     /translation="MADESTAGKSGSVQQVQAAARAVRARFSLRRGVAAVVADAVLAV
                     GTGFILLGLFMGWQAWLAWHQADAGRTLLAARQTVATRIALTVADERADITHALTQPA
                     LIAALAAGNDDATRATATAQLKSTLKHASAVTLYSTQLNEVLHGNIQQLVKLGYARAA
                     QLMHALDDDTLGPAQSPVAHTMSFAGPIIGADGKVLAYAAIDFQDTPLRIALHSAALS
                     AGSLQLVQTNKSGDIVLDSVGHGNAATGDEGVPIAHSLYRITATPEQFWLPVTQSFVA
                     ALVLAAIALLLGFGTLYLRPRLRARLGGAPVHDEPVFADLLADAKAASAAAPSPSTSA
                     NAVQTAATQAAPTTAETHDADPIPDRSIFRAYDIRGVVDQTLSAGVARQLGRAIGSAL
                     LDLGLHEIVVGRDGRLSGPMLSAALIEGLRAAGADVIDIGAVPTPVSYFAAFQLNTGS
                     CISVTGSHNPPDYNGFKVVLGGETLAEDAIQDLYQRIVDGRLAEGHGALREYDIQAEY
                     IERIASDIQTGRALKVVVDCGNGIAGNIGPGVVHAIGCEPIPLYCEVDGNFPNHHPDP
                     SEPKNLADLILTVKKTGADLGIAFDGDGDRLGVVTKAGEIVYPDRVLMLFAQDVLTRN
                     PGATILYDVKCTGHLQPLILAAGGSPLMWKTGHSLIKAKMKETGAQLAGEMSGHFFFR
                     ERWYGFDDGVYAAARLLEILADDPESRTPEEIFATLPKGVATPELHIPMAEGQSHPFV
                     ARFRERADFAGARITTIDGLRADWPDGWGLVRASNTTPVLVLRFDADSAAALKRIEDA
                     FRTQLLACDSSLKLPF"
     gene            complement(3568..4035)
                     /gene="dut"
                     /locus_tag="VFM52_02460"
     CDS             complement(3568..4035)
                     /gene="dut"
                     /locus_tag="VFM52_02460"
                     /EC_number="3.6.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017915644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004170 - dUTP diphosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0006226 - dUMP biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0046081 - dUTP catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dUTP diphosphatase"
                     /protein_id="HET8764057.1"
                     /translation="MTAPPLPIELRCLDPRLGASIPLPAYATPGSAAMDLRAAPAAPV
                     VLAPGDSVLVPTGLAIHIGDPGWCALILPRSGLGHKHGLVLGNLTGLIDADYQGPLTI
                     SCWNRGRAPFTITPGDRIAQLLVTPVARVAWRVVEAFTPSERGARGFGSTGVA"
BASE COUNT          618 a         1300 c         1453 g          667 t
ORIGIN      
        1 aacagcgtgt cgggtggtac caccaccgtg cggtagcggt attcgctggc gacttcgacc
       61 gcgcacggca cgcccgcgat gccttccagc cagtacttgg cgaccatgcc ggcgtggaaa
      121 ctcgtgccgc aggcgacgat gtgcacctgg cgcacgcggc gcagcagcgt gtcggcgtcg
      181 atgccaaaga tgttgggcaa cacgcggcca tcgctgatgc ggccttcgaa cgtgttggcg
      241 acggcggtgg gctgctcgaa gatttccttc agcatgtaat ggcgaaagcg gccgcgctcg
      301 accgcgtccc gcgacaggtc gctttcgcgc agcgtgcgcg tgacttcact gccatcggcg
      361 gcgatgacgg tgtgggtgtc gggcgtgatt tcgacgacgt cgccgtcttc gaggtacacg
      421 atcttgttgg tgacgccgat cagcgcttgt acgtccgagc ccaggaagga ctcgccgatg
      481 ccgacaccca cgcacaacgg gctgccgcgc cgcgcgccga cgacgtggcc gggatggtcg
      541 cggtgcagta cggcgatcgc gtaggcgcca cgcaggcggc gggtggcggc gatcacggcg
      601 tcgcgcaagc cggcgccttc ggccatgagt cggtgcacca ggtgggcgat cacttcggtg
      661 tcggtttccg aggtgaaggc gtagcccgcg gtttcgagtt cacgccggag ttcgacgtgg
      721 ttttcgatga tgccgttgtg caccaccgcg accgtgtcgc gcgaaacatg cggatgcgcg
      781 ttggcctcgg tcggtgcgcc gtgcgtggcc cagcgcgtgt gcgcgatgcc ggtgtggcta
      841 tggagatcgg ccgccttcca caacgcatcc agcttgacga ccttgccggg cgtgcgcagg
      901 cgttcgagct tgccgtctgc cagcaccgcg agaccggccg agtcgtagcc ccggtattcg
      961 agcgcgtgca ggcccgccag caggatgggc acgacatcgc gctgggcaac cgcggcaacg
     1021 attccacaca tggctaagga cctgaacgga gggcaaagac acgcacgata cagcaacgca
     1081 accgtgtgac ccccgcgcgc ggcaaaagtt tggcggcgtg tcagaacggc agtttgaggc
     1141 tcgagtcgca ggccaggagc tgcgtgcgga atgcgtcttc gatccgtttc agcgcggcgg
     1201 cgctgtcggc gtcgaaacgc agcaccagca ccggcgtggt gttggacgcg cgcaccaggc
     1261 cccagccgtc cggccagtcg gcgcgcagac cgtcgatggt agtgatgcgc gcaccagcga
     1321 aatccgcgcg ttcacggaag cgcgccacga acggatggct ctggccttcg gccatcggga
     1381 tatgcagttc cggtgtcgcg acgcccttgg gcagggtcgc gaaaatttcc tcgggcgtgc
     1441 ggctttccgg atcgtcggcc aggatttcca gcagccgcgc ggcggcgtac acgccgtcgt
     1501 cgaagccgta ccagcgctcg cggaagaaga aatgcccgct catttcgccg gcgagctgcg
     1561 cgccggtttc cttcatcttg gccttgatca gcgagtggcc ggtcttccac atcaacgggc
     1621 tgccgccggc tgcgaggatc aagggctgca ggtggcccgt gcatttgacg tcgtacagga
     1681 tcgtcgcgcc cggattgcgg gtcagcacgt cctgcgcaaa caacatcagc acgcggtcgg
     1741 gatacacgat ctcgcccgcc ttggtgacga cgcccaggcg atcgccgtcg ccgtcgaacg
     1801 cgatgccgag gtcggcgccg gtcttcttca ccgtcaggat caggtcggcg aggttcttgg
     1861 gttcggacgg atcggggtgg tggttcggga aattgccatc gacttcgcaa tacagcggga
     1921 tcggctcgca gccgatcgca tgcaccacgc ccggcccgat gttgccggcg atgccgttgc
     1981 cgcaatcgac gacgactttc agcgcgcgcc cggtctggat atccgaggcg atgcgctcga
     2041 tgtattccgc ctggatgtcg tattcgcgca gcgcgccgtg gccttcggcc aggcggccat
     2101 cgacgatgcg ctggtacaaa tcctggatcg cgtcctcggc gagcgtctcg ccacccagca
     2161 cgaccttgaa accgttgtag tcgggcgggt tgtggctgcc ggtcaccgag atgcacgaac
     2221 cggtgttgag ctggaacgcc gcgaaatagc tgaccggcgt cggcaccgcg ccgatgtcga
     2281 tcacgtcggc gcccgcggcg cgcaggcctt cgatcagggc cgcggacagc atcggccccg
     2341 acaggcgccc gtcgcggccg accacgattt cgtgcagacc gaggtcgagc agcgcactgc
     2401 cgatcgcgcg acccagctgg cgggctacgc ccgcgctgag ggtttggtcc accacgccgc
     2461 gaatgtcgta ggcgcggaag atgctgcggt cgggaatggg atccgcgtcg tgggtttcgg
     2521 cggtggtggg tgcggcctgg gttgctgcgg tttgcactgc gttggcggaa gttgacggag
     2581 aaggagcagc ggctgacgcg gccttggcgt ccgccaacag gtcggcgaac accggctcgt
     2641 cgtggaccgg cgcgccgccc agtcgcgcgc gaaggcgcgg acgcaggtac agcgtgccga
     2701 agcccagcag cagcgcgatc gcggccagca ccagcgccgc gacgaacgat tgcgtgaccg
     2761 gcagccagaa ttgttccggc gtcgccgtga tgcggtacag gctgtgcgcg atcggcacgc
     2821 cttcgtcgcc ggtggcggcg ttgccgtggc cgacgctgtc gagcacgatg tcgcccgact
     2881 tgttggtctg caccagttgc aggctgccgg cgctgagcgc cgccgaatgc agcgcgatcc
     2941 tgagcggcgt gtcttggaaa tcgatcgccg cataggccag caccttgccg tcggcgccga
     3001 tgatcggccc ggcgaaactc atagtgtgcg cgacgggcga ctgtgcgggg ccgagggtat
     3061 cgtcgtccag cgcgtgcatc agctgtgcgg cgcgcgcgta gccgagtttc accagctgct
     3121 ggatgttgcc gtgcaggact tcgttcagct gcgtgctgta gagcgtcacg gcactggcat
     3181 gcttgagcgt ggacttcagc tgcgcggtgg ccgtggcgcg cgtcgcgtca tcgttgccgg
     3241 cagcgagtgc ggcgatcaag gccggttgcg tcaacgcgtg ggtgatgtcg gcgcgctcgt
     3301 cggcgacggt cagcgcaatc ctcgtcgcga cggtctggcg cgcggcgagc agcgttcggc
     3361 cggcgtcggc ctggtgccat gcgagccacg cttgccagcc catgaacagg ccgagcagga
     3421 tgaagccggt gccgacggcc aggaccgcgt cggcgacgac ggccgccacg ccccggcgca
     3481 ggctgaagcg ggcgcgcacg gcgcgtgctg cggcctgtac ctgctgcacg ctgcccgatt
     3541 tgccggctgt cgattcgtct gccatggtta cgccaccccg gtcgaaccga acccccttgc
     3601 gccgcgttcg ctcggcgtga atgcctcgac tacgcgccac gccacgcgcg ccaccggcgt
     3661 gaccagcaat tgcgcgatgc ggtcacccgg ggtgatggta aatggcgccc ggccacggtt
     3721 ccagcaggaa atcgtcagcg ggccctggta gtcggcgtcg atcaggccgg taaggttgcc
     3781 gagtaccagc ccgtgtttgt ggcccaggcc cgagcgcggc aggatcagtg cgcaccagcc
     3841 gggatcgccg atgtggatcg cgaggcccgt tggcaccagc acgctgtcgc ccggggccag
     3901 gacgacgggc gctgccggtg cggcgcgcaa atccatcgcg gcgctgccgg gcgtggcgta
     3961 ggccggcaag ggaatcgatg cgccgaggcg cgggtcgagg cagcgcagtt cgatgggcag
     4021 gggcggagcc gtcatgcc
//
LOCUS       DASSVL010000147         3307 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_87648, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000147 DASSVL010000000
VERSION     DASSVL010000147.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3307)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3307)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3307
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_87648"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..441)
                     /gene="map"
                     /locus_tag="VFM52_02465"
     CDS             complement(<1..441)
                     /gene="map"
                     /locus_tag="VFM52_02465"
                     /EC_number="3.4.11.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010486307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I methionyl aminopeptidase"
                     /protein_id="HET8764058.1"
                     /translation="MTIATKTPAEIEKMRVAGRLAAEVLQVVAPHVKPGVTTAELDRI
                     CHDHIVNVQQAIPANVGYKGYPATVCTSVNNVICHGIPSEGKVLKDGDIVNIDVTVIK
                     DGWHGDTSRMYYVGEPSVMARRLVETTREAMFRGIRAVKPGATLG"
     gene            763..1608
                     /gene="rpsB"
                     /locus_tag="VFM52_02470"
     CDS             763..1608
                     /gene="rpsB"
                     /locus_tag="VFM52_02470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006452836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S2"
                     /protein_id="HET8764059.1"
                     /translation="MPQITMRQMLEAGVHFGHQTRYWNPKMAPYIFGARGKIHIINLE
                     KTVPLFGDAMNFISGIAQKRGMILFVGTKRSARDAVKEEAERCGMPYMTQRWLGGTLT
                     NFATVKKSVSRLKELEAGETDGTFQKLVKHEVLGLRREREKLLASLGGIKEMNRLPDA
                     LFVIDIGHEDIAIKEAKKLGIPVIAVVDTNYDPALVDYPIPGNDDAIRAVQLYARAAA
                     DAVLEGKAAAPQAASVREEDFSADGDGKATTRRAPRKAAAKKADDAQAEGAAPEAAAE
                     APGAE"
     gene            1711..2589
                     /gene="tsf"
                     /locus_tag="VFM52_02475"
     CDS             1711..2589
                     /gene="tsf"
                     /locus_tag="VFM52_02475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008211647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation elongation factor Ts"
                     /protein_id="HET8764060.1"
                     /translation="MAEITASLVKELRERTGAGMMECKKALTENNGDIDAAAEWLRKS
                     GLAKADKKASRVAAEGRIASAQDGGKAVLVEVNSETDFVAKDANFLAFCDSVAKVALA
                     SGAQDAEALKAATLATGETVEEGRSALIAKVGENVQVRRLARMEGGNVAAYVHGGKIG
                     VLVSMKGGDAELARGIAMHVAAMNPPYNKAADVPAEFVAKEKEIELAKMSDKDRQKPA
                     EILEKIIGGKVAKIVNEVSLYGQPYVLDTNQTVEAALKAAGAEVVSFVRLAVGEGIEK
                     QVDDFAAEVMKQAGLA"
     gene            complement(2665..>3307)
                     /locus_tag="VFM52_02480"
     CDS             complement(2665..>3307)
                     /locus_tag="VFM52_02480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013723329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HET8764061.1"
                     /translation="ATPLRVRSPLPVGDGQALLKRRPDVRAAERRLAAATARIGVATA
                     DLFPRFTLGGLIGSQAVDAGALFERDSETRLAVLGIDWSFLDVGRVRARIAAANADAD
                     AELARYQQSVLLALEDTENALVRYGRAREADAHLAQAAADSTRAAGLARIRYDAGAAA
                     LFEVLDAERTRLQAQDASADARTRSAEGLVALYKAMAGGWPAKFPRRETAGRD"
BASE COUNT          545 a         1184 c         1149 g          429 t
ORIGIN      
        1 gcccagggtc gcgcccggct tgaccgcgcg gatgccgcgg aacatggcct cgcgggtggt
       61 ctccaccagg cgccgcgcca tcaccgacgg ctcgccgacg tagtacatgc ggctggtgtc
      121 gccgtgccag ccgtccttga tcacggtgac gtcgatgttg acgatgtccc cgtccttcag
      181 gaccttgccc tcgctgggga tgccgtggca gatgacgttg ttcaccgagg tgcagacggt
      241 ggccgggtag cccttgtagc cgacgttggc cgggatggcc tgctgcacgt tcacgatgtg
      301 gtcgtggcag atccggtcga gctcggccgt ggtcaccccc ggcttcacgt gcggggcgac
      361 cacctgcagc acttcggcgg ccaggcggcc ggcgacgcgc atcttctcga tctcggcggg
      421 ggtcttggtg gcgatggtca tccgccaatt atcgcccatt ccggggccgg gccgaccccc
      481 cgctacccgc cccggggccc gcaagttgcc cctaaccggc tgaacccgct acaattccgc
      541 ggctgagccg gccccaggct tgccagcacg cccacggtgg gcgccaccac cgaatacaca
      601 cccgtccgcc acaacccatg ccggggtgct tccgcgagga agttcggcca tggaagcgga
      661 cggggaggcc caaccccgga atccacggtg cgccgccgaa gaacggcgcg ccaccgccca
      721 tcacatgccg ggcggcgggt tccccatcga gagagcacag caatgcccca gatcaccatg
      781 cgccagatgc tggaagccgg cgtccacttc ggccaccaga cccgttactg gaacccgaag
      841 atggccccgt acatcttcgg cgcccgcggc aagatccaca tcatcaacct cgagaagacc
      901 gtgccgctgt tcggcgacgc gatgaacttc atctcgggca tcgcgcagaa gcgcggcatg
      961 atcctgttcg tcggcaccaa gcgctccgcg cgcgacgccg tgaaggaaga ggccgagcgc
     1021 tgcggcatgc cgtacatgac ccagcgctgg ctgggcggca cgctgaccaa cttcgcgacc
     1081 gtcaagaagt cggtgtcgcg cctgaaggag ctggaagccg gcgagaccga cggcaccttc
     1141 cagaagctgg tcaagcacga agtgctgggc ctgcgccgcg agcgcgagaa gctgctggcc
     1201 tcgctgggcg gcatcaagga aatgaaccgc ctgcccgacg cgctgttcgt gatcgacatc
     1261 ggccacgagg acatcgcgat caaggaagcc aagaagctcg gcatcccggt catcgccgtc
     1321 gtcgacacca actacgaccc ggccctggtc gactacccga tcccgggcaa cgacgacgcg
     1381 atccgcgcgg tgcagctgta cgcccgtgcc gccgccgacg ccgtgctcga gggcaaggcc
     1441 gccgcgccgc aggccgcttc ggtccgcgaa gaggacttct ccgccgacgg cgacggcaag
     1501 gcgaccaccc gccgcgcgcc gcgcaaggcc gccgcgaaga aggccgacga cgcgcaggcc
     1561 gaaggcgccg cgcccgaggc cgccgcggaa gccccgggcg ccgagtaacg ccccgtgtag
     1621 agccgaccca tggtcggctc tcctgcgcgc cggcacatct gagccgacca tgggtcggct
     1681 ctacatccaa acgaattcga ggtatccccc gtggcagaaa tcaccgcttc cctggtcaag
     1741 gaactgcgcg agcgcaccgg cgccggcatg atggagtgca agaaggcgct caccgagaac
     1801 aacggcgaca tcgacgccgc cgccgagtgg ctgcgcaagt cgggcctcgc caaggccgac
     1861 aagaaggcct cgcgcgtcgc cgccgaaggc cgcatcgcct ccgcgcagga cggcggcaag
     1921 gccgtgctgg tcgaggtcaa ctccgagacc gacttcgtgg cgaaggacgc caacttcctc
     1981 gccttctgcg acagcgtcgc caaggtcgcg ctggccagcg gcgcgcagga cgccgaggcg
     2041 ctgaaggccg cgacgctcgc caccggcgag accgtcgagg aaggccgctc cgcgctgatc
     2101 gccaaggtcg gcgagaacgt gcaggtccgt cgcctggcgc gcatggaagg cggcaacgtc
     2161 gccgcgtacg tgcacggcgg caagatcggc gtgctcgtgt cgatgaaggg cggcgacgcc
     2221 gagctcgcgc gcggcatcgc gatgcacgtg gccgcgatga acccgccgta caacaaggcg
     2281 gccgacgtgc cggccgagtt cgtggcgaag gagaaggaga tcgagctggc gaagatgtcc
     2341 gacaaggacc gccagaagcc ggccgagatc ctcgagaaga tcatcggcgg caaggtcgcc
     2401 aagatcgtca acgaagtcag cctgtacggc cagccctacg tgctcgacac caaccagacc
     2461 gtcgaggccg cgctgaaggc cgccggcgcc gaggtggtct cgttcgtgcg cctggccgtc
     2521 ggcgagggca tcgagaagca ggtcgacgac ttcgccgccg aagtgatgaa gcaggccggc
     2581 ctggcgtaag cgccgcgccc cgccctgcag gaagaagccc cgggagaccg gggctttttt
     2641 tttggccttt gtcgcgcccc gcgatcagtc gcggcccgcg gtctcgcgcc gcggaaactt
     2701 cgccggccag ccgccggcca ttgccttgta cagcgcgacc aggccttcgg cgctgcgggt
     2761 gcgcgcatcg gcggaggcgt cctgcgcctg cagccgcgtg cgctccgcgt cgagcacctc
     2821 gaacagcgcg gcggcgccgg cgtcgtagcg gatgcgcgcg agcccggccg cgcgggtgct
     2881 gtctgccgcc gcctgcgcga ggtgcgcgtc ggcttcgcgc gcgcgtccgt agcgcaccag
     2941 cgcgttctcc gtgtcctcca gcgccagcag cacggactgc tggtagcgcg cgagctccgc
     3001 gtcggcatcg gcgttcgccg cggcgatgcg ggcacgcacg cggccgacat cgaggaagga
     3061 ccagtcgatg ccgagcacgg cgagccgggt ctcgctgtcg cgttcgaaca gcgcacccgc
     3121 gtccaccgcc tggctgccga tcagcccgcc gagcgtgaag cgcgggaaca ggtcggcggt
     3181 ggcgacgccg atgcgcgccg tggcggccgc cagccgccgc tcggccgcgc gcacgtcggg
     3241 gcgccgcttc aggagggcct ggccgtcgcc gaccggcagg ggcgagcgga cccgcagcgg
     3301 cgtggcg
//
LOCUS       DASSVL010000148         2415 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_299704, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000148 DASSVL010000000
VERSION     DASSVL010000148.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2415)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2415)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2415
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_299704"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..252
                     /gene="hisE"
                     /locus_tag="VFM52_02485"
     CDS             <1..252
                     /gene="hisE"
                     /locus_tag="VFM52_02485"
                     /EC_number="3.6.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013535483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004636 - phosphoribosyl-ATP diphosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyl-ATP diphosphatase"
                     /protein_id="HET8764062.1"
                     /translation="RPAGSYTTRLFESGVRRMAQKVGEEGVETALAAVAQGDEELLGE
                     AADLVFHLTVVLRARHLGLADVAAVLARRHAEREAHPAR"
     gene            complement(254..1240)
                     /locus_tag="VFM52_02490"
     CDS             complement(254..1240)
                     /locus_tag="VFM52_02490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015447346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="C13 family peptidase"
                     /protein_id="HET8764063.1"
                     /translation="MRTLVATLLAFAAGVLLVLWLPLHAPASKAAPLVAPASPAGAPA
                     DAGDDATANWPDRAPTPEQVLYAQPQLVRRALAGLTPRVPGQPNLYAIAFAGDGSENV
                     FRNEARYMAHAFPARLGPSTHVLVLENNPGSLASRPLATWSNLEDALDGLARIMHPED
                     ILMLYITTHGSEDHELLVDMDPLPLDQIDADDLAGILKEHPFNWKVIVVNACYSGGFI
                     PPLRAPGTLVLTAARGDRSSFGCGSESELTYFGHAWLVDGLNHSDDFVTAFDTAKAEI
                     AKWEQQDKLTPSEPQMDVGSGIAAQLATWRKGVKVGAAVPFAPASPALAARR"
     gene            complement(1244..1930)
                     /gene="mtnC"
                     /locus_tag="VFM52_02495"
     CDS             complement(1244..1930)
                     /gene="mtnC"
                     /locus_tag="VFM52_02495"
                     /EC_number="3.1.3.77"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008434280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016791 - phosphatase activity [Evidence
                     IEA];
                     GO_function: GO:0016862 - intramolecular oxidoreductase
                     activity, interconverting keto- and enol-groups [Evidence
                     IEA];
                     GO_process: GO:0019509 - L-methionine salvage from
                     methylthioadenosine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acireductone synthase"
                     /protein_id="HET8764064.1"
                     /translation="MPPVRAVLTDIEGTTSSIHFVKDVLFPYARKRLPAFVETHADQA
                     EVRHWLHAAASEAGLVEVPRQAVIELLLRWIDEDRKSTALKALQGMIWRDGYVSGDYR
                     AHVYAEVPARLGAWHAAGLQLYVYSSGSVAAQKLFFAYSEAGDLTLLFSGYFDTTTGP
                     KRDTTSYAQIAATIGMAPTHILFLSDIVEELDAAQAAGMQTGWLIRAPLPMPRHPRHP
                     VYADFDAITP"
     gene            complement(1977..>2415)
                     /locus_tag="VFM52_02500"
     CDS             complement(1977..>2415)
                     /locus_tag="VFM52_02500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007082780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="cupin"
                     /protein_id="HET8764065.1"
                     /translation="NQPIAPGASPDEVIAAYRGDIDRLMGEAGYQAVDVISLTPDHPD
                     RAALRQKFLNEHTHSEDEVRFFVAGAGQFTLHLGDKVYDVLCVAGDLIGVPDGTRHWF
                     DMSEAPYFVAIRLFTNKDGWVANYTGNDIAKGFPRMQPIAANA"
BASE COUNT          368 a          752 c          893 g          402 t
ORIGIN      
        1 cggccggcgg gcagctacac cacccggctg ttcgaatccg gcgtgcgccg gatggcgcag
       61 aaggtcggcg aggagggcgt ggaaaccgcc ttggcggcgg tggcgcaagg tgacgaggaa
      121 ctgctcggcg aagccgccga cctggttttt cacctgaccg tggtgttgcg cgcgcgccac
      181 ctgggcctgg ctgacgtggc cgcggtgctc gcacgtcgcc acgccgagcg cgaggcgcat
      241 cccgcgaggt gagtcagcgt cgcgccgcga gtgcggggga cgcgggcgcg aatggcacgg
      301 cggcgccgac cttgaccccc ttgcgccagg tcgccagttg cgcggcgatg ccactgccga
      361 cgtccatctg cggctcggaa ggcgtgagct tgtcctgctg ctcccacttt gcgatctccg
      421 cctttgccgt gtcgaaggcg gtgacgaaat cgtcgctgtg gttcaggccg tcgaccagcc
      481 aagcgtggcc gaaataggtg agctcggatt cgctgccgca gccgaacgag ctgcggtcgc
      541 cgcgcgccgc ggtcagcacc agcgtaccgg gtgcgcgcag cggcgggatg aagccccccg
      601 aatagcaggc gttgaccacg atcaccttcc agttgaatgg gtgttccttg aggatgccgg
      661 caagatcatc cgcgtcgatc tggtccagtg gcagcgggtc catgtcgacc agcagctcgt
      721 ggtcctcgct gccgtgggtg gtgatgtaga gcatcaggat gtcctctgga tgcatgatcc
      781 tggcgagccc gtccagcgca tcttcgaggt tgctccacgt ggccagtgga cgactggcga
      841 gcgaccccgg attattttcc agcaccagca cgtgggtgct ggggccgaga cgggcgggga
      901 acgcgtgcgc catgtacctg gcctcgttgc gaaacacgtt ttcgctgccg tcgccggcga
      961 aggcgattgc atacaggttg ggctggcccg gcacgcgcgg ggtgagcccg gcaagcgcgc
     1021 ggcgcaccaa ttgcggctgc gcgtaaagca cctgttccgg tgtcggtgcc cggtcgggcc
     1081 agttggccgt ggcgtcatca ccggcatcgg caggggcgcc cgccggggag gccggcgcga
     1141 cgagcggcgc ggccttcgag gcgggggcat gcagcggcag ccagagcacc agcagcacgc
     1201 cggcagcgaa cgcaagcagg gtggcgacga gggtacgcat ggctcagggc gtgatggcgt
     1261 cgaaatcggc atacaccgga tggcgcggat gccgcggcat gggcagcggt gcgcgtatca
     1321 gccagccagt ctgcatgccg gcggcctggg cggcatccag ttcttcgacg atgtcggaca
     1381 ggaacaggat gtgagtgggg gccatgccga ttgtcgccgc gatctgcgca tacgacgtcg
     1441 tgtcgcgctt cggcccggta gtggtgtcga agtagccgct gaacagcagg gtcaagtcgc
     1501 cggcctcgct gtaggcgaag aacagctttt gcgcggcgac ggagccggag gaatacacat
     1561 acagctgcag tcccgccgcg tgccaggcgc cgagccgcgc cggcacctcg gcgtacacat
     1621 gcgcgcggta gtcgccgctc acgtagccgt cgcgccagat catgccttgc aatgccttga
     1681 gcgcggtcga tttgcgatcc tcatcgatcc agcgcagcag cagctcgatc accgcctgcc
     1741 gcgggacttc gaccagcccg gcctcgctcg cggccgcgtg cagccagtgc cgtacttcgg
     1801 cctggtcggc atgggtttcg acgaacgcgg gcaggcgctt gcgtgcgtag ggaaacagca
     1861 catccttgac gaagtggatc gagctggtgg tgccttcgat atcggtgagg acggcgcgga
     1921 cggggggcat gcggcgaacc ctgggaacgg ggttccagtc taccgggcgt accggttcac
     1981 gcgttggccg cgatcggctg catgcgcggg aaacccttgg cgatgtcgtt gccggtgtaa
     2041 ttggcgaccc agccgtcctt gttggtgaac aggcggatgg cgacgaaata cggcgcctcg
     2101 ctcatgtcga accagtggcg ggtgccgtcg ggtacgccga tcaggtcgcc ggccacgcac
     2161 agcacgtcgt agaccttgtc gccgaggtgc agggtgaact ggccggcgcc ggcgacgaag
     2221 aagcgcactt cgtcctcgct gtgcgtgtgt tcgttgagga atttctggcg cagggcggcg
     2281 cggtcggggt ggtcgggcgt caggctgatc acgtcgaccg cctggtagcc cgcctcgccc
     2341 atcaggcggt cgatgtcgcc gcggtaggcg gcgatcactt cgtccgggct ggcgcccggg
     2401 gcgatgggct ggttc
//
LOCUS       DASSVL010000149         2377 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_907129, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000149 DASSVL010000000
VERSION     DASSVL010000149.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2377)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2377)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2377
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_907129"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..277)
                     /locus_tag="VFM52_02505"
     CDS             complement(<1..277)
                     /locus_tag="VFM52_02505"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HET8764066.1"
                     /translation="MNPTLPSLLDALRQASALLQSGDLRSAHDRLQAIVASHPDCVEA
                     LRLLGGLRRGAGDIAGAEALLRHALALDANWAPTLATLGELLLDSGRA"
     gene            complement(384..>2377)
                     /locus_tag="VFM52_02510"
     CDS             complement(384..>2377)
                     /locus_tag="VFM52_02510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018974085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glycoside hydrolase family 65 protein"
                     /protein_id="HET8764067.1"
                     /translation="PGWSEIDYNPGSGWMNSTRLDPQIFADYSQTLDMHDGTLTTRYR
                     FQYVKNPTDIEVTTFVSQADPHLAATRITLTPRFSGKVELKFPLRLWSQHQPRFPIDR
                     MSGDEMIAAVIASGQNLDNKPVPTADRKPVWYPGYTQVLADQGDAKSLTLSLDGRAVQ
                     GLAMAEAAAVQLPAGVAPISSRIIKDDWQLTLDVVVPVAAGKSYAFTKYVAVSRAGWG
                     GDAKADLALATQARATGFDALLARHQAAWHRLWRADIVVDGDPAVQKAVHSDLYYLYA
                     NTTVGTAWPMGACALTPNYAGHAFWDSDSWVFPALLLLHPERAKPIVMFRARTMAPAR
                     TQAAQYGWKGLMYPWESDPEKGTVVTPHFAEGVHREIHNNADIAIAQWQYWLASGDLG
                     WLKQHGWPVIHGIAEFWTSRVHWDPAHDRYEILHVTSPDEAYDDVPNDSFTNAAAQKA
                     LRIAVAAAQAVGATPDPQWSRIADHMYIPFDTAAQRHQDFDPSVPHDKITWFGSTLAW
                     LMYPNLDLPMSPAVRRNDFAYQLQALKTHGDDPNEMLMVMLAVGSAELGDASDAGQWL
                     QRNVTGFLKPPFNVRTETVANNNGYILATSAGYVQSMLYGLTGLRIDAKGLDPAYAPV
                     LPPSWKSLTLKGVSFRGKRYDITVARDAAGKATLAWRGA"
BASE COUNT          330 a          774 c          871 g          402 t
ORIGIN      
        1 cggcgcggcc gctgtcgagc agcagttcgc ccaacgtcgc cagcgtgggc gcccagttcg
       61 cgtccagcgc cagcgcgtgg cgcagcaatg cttccgcccc cgcgatgtcg cccgcgcctc
      121 ggcgcaaccc gccgagcagg cgcagtgctt ccacgcagtc cgggtggctg gcgacgatgg
      181 cctgcaggcg gtcgtgggcg ctgcgcaggt cgccggattg cagcagggcg ctggcctggc
      241 gcaaggcgtc gagcagggag ggcagggtcg gattcatgcg gcgcgacctc gtcggatcga
      301 gcgtgccgcg cgcttcaagc cctctccttc aaggggaagg ttgggtgggg atggggtaaa
      361 ggggccgtgc cgggtcccgc ccatcacgca ccccgccacg ccagtgtcgc cttgcccgcc
      421 gcatcgcgcg ccacggtgat gtcgtagcgc ttcccgcgga agctcacccc cttgagcgtg
      481 agcgatttcc agctgggcgg cagcaccggc gcatacgccg ggtccaggcc cttggcgtcg
      541 atgcgcaggc cggtcaggcc gtacagcatg ctctgcacat agccggccga ggtggccagg
      601 atgtagccgt tgttgttggc cacggtttcg gtgcgcacgt tgaacggcgg cttgaggaag
      661 ccggtgacgt tgcgctgcag ccactggccg gcgtcgctgg cgtcgcccag ttcggccgag
      721 cccaccgcca gcatcaccat cagcatctcg ttggggtcgt cgccgtgggt cttgagcgcc
      781 tgcaactggt aggcgaagtc gttgcggcgc accgccgggc tcatcggcag gtcgaggttg
      841 gggtacatca gccacgccag ggtggagccg aaccaggtga tcttgtcgtg cggcaccgac
      901 gggtcgaagt cctggtgacg ctgtgccgcg gtgtcgaacg ggatgtacat gtggtcggcg
      961 atgcgcgacc actgcgggtc gggcgtggcg cccacggcct gcgccgccgc cactgcgatg
     1021 cgcagcgcct tttgcgcggc cgcattggtg aagctgtcgt tgggcacatc gtcgtaggcc
     1081 tcgtccggcg aggtgacgtg caggatctcg tagcggtcgt gcgccgggtc ccaatggacc
     1141 cggctggtcc agaactcggc gatgccgtgg atcaccggcc agccatgttg cttgagccag
     1201 ccgaggtcgc cgctggcgag ccagtactgc cattgggcga tggcgatgtc ggcgttgttg
     1261 tggatctcgc ggtgcacgcc ttcggcgaag tgcggcgtga ccaccgtgcc tttctcgggg
     1321 tcggattccc atgggtacat caggcccttc cagccatact gcgcggcctg cgtccgcgcc
     1381 ggcgccatgg tgcgggcgcg gaacatcacg atcggcttgg cgcgttccgg atgcagcagc
     1441 aacagcgcgg gaaacaccca tgaatcgctg tcccagaacg cgtgcccggc atagttcggc
     1501 gtgagcgcgc aggcgcccat cggccacgcg gtgcccaccg tggtgttggc atacaggtag
     1561 tagaggtcgg agtgcaccgc cttctgcacc gccgggtcgc cgtcgacgac gatgtcggcg
     1621 cgccacagcc ggtgccacgc cgcctggtgg cgtgccagca gggcatcgaa gccggtggcg
     1681 cgcgcctggg tggccagcgc aaggtcggcc ttggcatcgc cgccccagcc tgcacgcgag
     1741 acggcgacgt acttggtgaa cgcgtaggac ttgccggccg cgaccgggac gaccacgtcg
     1801 agcgtgagct gccagtcgtc cttgatgatc cggctgctga tcggcgccac gcccgcgggc
     1861 aactgcacgg cggcggcctc ggccatcgcc aggccctgca cggcgcggcc gtccagggac
     1921 agcgtgagcg acttcgcgtc gccctggtcc gccagcacct gcgtgtagcc gggataccac
     1981 accggcttgc ggtcggcggt ggggacgggc ttgttgtcga ggttctggcc gctggcgatc
     2041 accgcggcga tcatctcgtc gccgctcatg cggtcgatcg gaaagcgcgg ctggtgctgc
     2101 gaccacaggc gcagcggaaa cttcagttcc accttgccgc tgaaccgcgg ggtgagcgtg
     2161 atgcgggtcg cggcgaggtg cggatcggcc tggctgacga aggtcgtcac ctcgatgtcg
     2221 gtcgggttct tgacgtactg gaagcggtag cgcgtggtca gcgtgccgtc gtgcatgtcc
     2281 agcgtttgcg aatagtcggc gaagatctgc gggtcgaggc gcgtggaatt catccagccg
     2341 ctgccggggt tgtagtcgat ctcgctccag cccggaa
//
LOCUS       DASSVL010000150         3063 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_963569, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000150 DASSVL010000000
VERSION     DASSVL010000150.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3063)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3063)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3063
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_963569"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..455)
                     /locus_tag="VFM52_02515"
     CDS             complement(<1..455)
                     /locus_tag="VFM52_02515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008213103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY-associated TM helix domain-containing
                     protein"
                     /protein_id="HET8764068.1"
                     /translation="MRLVLFCKYLRPATHSLLKTCRQIHLYLGVFAAPALLFFAITGG
                     LQTFSLHETARGSSYAPPKWLAVAAQLHKKQNMDVPAHKLRPAADPAARAANAVPAPV
                     ARPAVGAAVPRKRNPLPLKIFTGLVALALAVSTLSGLYLAWKYTRRAGR"
     gene            complement(759..1223)
                     /locus_tag="VFM52_02520"
     CDS             complement(759..1223)
                     /locus_tag="VFM52_02520"
                     /inference="COORDINATES: protein motif:HMM:NF013936.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043169 - cation binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hemerythrin domain-containing protein"
                     /protein_id="HET8764069.1"
                     /translation="MDATTPSKLLAVQHQHIDQGVAGIVGGGNDTSALAAALKLLRQH
                     LYIEEAALFPPLESTGLTMPVFVMKREHGQMWPLIVRLEGACASGAGADELRGDCATL
                     LQLLNMHNPKEEQIVYTAADRYEPAHPEAPLVAAMAAAKMPNGWVCAMAPKK"
     gene            complement(1263..1628)
                     /locus_tag="VFM52_02525"
     CDS             complement(1263..1628)
                     /locus_tag="VFM52_02525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8764070.1"
                     /translation="MLIESIRALAQFGPDHFTPVTLARTEHSDMKVVGLEAGQAIPVH
                     HPGSDLTMVVIEGDVTLVAGDEELPHAGPGAVLHAKAGEARGVHANQRTILVITASPP
                     PTPADHRELAEHFAKGTWR"
     gene            complement(1707..2210)
                     /locus_tag="VFM52_02530"
     CDS             complement(1707..2210)
                     /locus_tag="VFM52_02530"
                     /inference="COORDINATES: protein motif:HMM:NF019928.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC domain-containing protein"
                     /protein_id="HET8764071.1"
                     /translation="MGDETIKVGTIRRLAGGAFEGKLSRVYEGHTRAEVWKFLTVPAS
                     MAQWLAAGTIELRQGGAVNIDFHDSGVVIASHVLELDPERVLTYSWSSGKDPERPLRW
                     QLDDDPAGVRLSLTVHTPANEDPGKACAGFEGHLEMLGAALEGVPIKFPFDVFLAART
                     AYRGQLE"
     gene            complement(2292..>3063)
                     /locus_tag="VFM52_02535"
     CDS             complement(2292..>3063)
                     /locus_tag="VFM52_02535"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HET8764072.1"
                     /translation="LGMALLGLGLVGGMFAVSYLGEAHRHFEIAAVMVPALVAVLAAV
                     TFVRHVRRTAAPFIAPHMIYGRGFGAVNAVNALYGGVRSGAIALVPLYATARYGIDAL
                     RSGTLLVAQGVATFAFSILAALLIRRTGYRMPIYVCGVIVAIGVVLFALPPPGGMSPY
                     TWLAATAFLVGAGGGLNPATRNAGLQLEPEHASTLAALRTMALQVGTITTISIATAFL
                     AGRADPGAAQAWVFVAVAAVLVAGLPLIARIPEHRGAW"
BASE COUNT          452 a         1045 c         1111 g          455 t
ORIGIN      
        1 atgcgccccg cgcggcgcgt gtatttccag gccagataca ggccgctcag ggtcgacacg
       61 gccagtgcca gcgcgaccag cccggtgaag atcttaagcg gcagcggatt ccgcttgcgc
      121 ggcacggcgg ccccgaccgc cggacgcgcc accggcgcgg gcaccgcgtt cgccgcccgc
      181 gccgccggat cggcagccgg acgcagcttg tgcgccggca cgtccatgtt ctgcttcttg
      241 tgcagctgcg ccgccaccgc cagccacttc ggcggcgcgt agctgctgcc gcgcgcggtc
      301 tcgtgcaggc tgaaggtctg caggccgccg gtgatggcga agaacagcag ggccggcgcg
      361 gcgaacacgc caaggtagag gtggatctgg cggcaggttt tcaggagcga atgggtggcg
      421 ggcctgaggt atttacaaaa gagaacgagt ctcatttgaa cacggggcaa ggatcgtgtc
      481 atgggcggcc ccccaaggca tcatggccgc gctggcccgc tgcgacggca cgccggcgaa
      541 cgtttcaggc caggccgaca ggccgatgac cgtaccgtgc agggggatcg agcgggcaag
      601 catcggacgg atcgccgctt gtcgggacac gacccgcggc aggagcggtt tccgtggcga
      661 ttgcccgatg acgctcgcga aggcgcgggg gctgattccc cgcgtcgtca tgtcacctca
      721 tttgccgaca tgtgggcgtc catgcggccg ggcggccgct acttcttcgg cgccatcgcg
      781 cacacccagc cgttcggcat cttcgcggcc gccatcgccg ccaccagtgg cgcctccggg
      841 tgcgcgggct cgtagcggtc cgcggcggtg tagacgatct gttcttcctt cgggttgtgc
      901 atattcagca gctgcagcag cgtggcgcag tcgccgcgca gttcgtcggc gccggcgccg
      961 gaagcgcacg caccttcgag gcgcacgatc agcggccaca tctggccgtg ttcgcgtttc
     1021 atcacgaaca ccggcatggt gaggccggtg gattccagtg gcggaaacag cgcggcctcc
     1081 tcgatgtaga ggtgctggcg cagcagcttc agcgccgccg cgagcgcgct ggtgtcattg
     1141 ccgccgccga cgatgccggc gacgccctgg tcgatgtgct ggtgctgcac ggcaagcagc
     1201 ttgctgggag tggtggcgtc catgggtggc cttgcatgga aaggtatcgc ccattgtgcg
     1261 cctcagcgcc aggtgccctt ggcgaaatgc tcggccagct cgcggtggtc ggccggggtc
     1321 ggcggcgggc tggcggtgat gacgaggatg gtgcgctggt tcgcgtgcac gccgcgcgcc
     1381 tcgcccgcct tcgcatgcag cacggcgccg gggccggcgt gcggcagttc ctcgtcgccg
     1441 gcgaccagcg tcacgtcgcc ctcgatcacg accatcgtga ggtcgctgcc cgggtggtgc
     1501 acggggatcg cctggccggc ttcgagtccg accaccttca tgtcgctgtg ctcggtgcgc
     1561 gcgagcgtga ccggggtgaa gtggtcgggg ccgaattgcg ccagggcgcg gatggattcg
     1621 atcagcatgg ttggcctccg tgaggaggcg agcatcgtgc gcacctgcac gatgctccat
     1681 gaccggcatc aaggcgcgca gtgcgcctac tcgagctggc cgcggtacgc ggtgcgcgcg
     1741 gcgaggaaca cgtcgaacgg gaacttgatc ggcacgcctt cgagcgcggc gccgagcatt
     1801 tccaggtggc cctcgaaacc cgcgcaggcc ttgccggggt cttcgttggc cggggtgtgc
     1861 acggtgagcg agagcctgac gccggccggg tcgtcgtcga gctgccagcg cagcggacgc
     1921 tcggggtcct tgccgctgct ccacgagtag gtcagcacgc gttcggggtc gagttcgagc
     1981 acgtggctgg cgatcaccac gccgctgtcg tggaagtcga tgttcaccgc gccgccctgg
     2041 cgcagctcga tggtgccggc cgccagccac tgcgccatcg atgccggcac ggtcaggaac
     2101 ttccacacct cggcacgggt gtggccttcg tacacgcgcg acagcttgcc ttcgaacgcc
     2161 ccgccagcga gccggcggat cgtccccacc ttgatcgttt cgtcgcccat cgcgcccctc
     2221 cacgttccgg ttgaggggcc cagcatagcc gccgcgcgcg ccgcgttcga ttgcgctgca
     2281 tcaagccagc gtcaccacgc gccgcggtgc tcggggatgc gggcgatcaa cggcaggccg
     2341 gcgaccagca cggcggccac ggcgacgaat acccacgcct gcgccgcgcc cggatcggcg
     2401 cgcccggcga ggaacgcggt ggcgatcgag atggtggtga tcgtgcccac ctgcagcgcc
     2461 atcgtgcgca gcgccgccag cgtcgaggcg tgttccggtt ccagctgcag cccggcgttg
     2521 cgcgtggcag ggttgagccc gccgccggcg ccgacgagga aggcggtggc cgcgagccat
     2581 gtgtaaggcg acatgccgcc tggcggcggc agcgcaaaca gcacgacgcc gatggcgacg
     2641 atgaccccgc acacgtagat cggcatgcgg tagccggtgc gccggatcag cagcgcggcg
     2701 aggatggaaa acgcgaacgt ggccacgccc tgcgccacca gcagcgtgcc cgagcgcagc
     2761 gcgtcgatgc cgtagcgcgc ggtggcgtac agcggcacca gcgcgatcgc gcccgagcgc
     2821 acgccgccgt acagcgcgtt gaccgcattg accgcgccga agccgcggcc gtagatcatg
     2881 tgcggggcga tgaacggcgc ggccgtgcgg cggacgtggc gcacaaatgt cactgcggcg
     2941 agcaccgcga ccagcgccgg caccatcacc gccgcgatct cgaaatgccg gtgcgcctcg
     3001 cccaggtagc tcaccgcgaa catgccgccg accaggccca ggccgagcag cgccatgccg
     3061 agg
//
LOCUS       DASSVL010000151         4470 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_991940, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000151 DASSVL010000000
VERSION     DASSVL010000151.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 4470)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4470)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4470
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_991940"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..594
                     /locus_tag="VFM52_02540"
     CDS             <1..594
                     /locus_tag="VFM52_02540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8764073.1"
                     /translation="EPVPVGPRGDYRVQRESAMGFARIFDNVWSGKRHAMVGPTQIDR
                     WGQANISMIGADYARPKVMMLGVRGFPGNSISHANSFFVPHHDPRVFVAGEVDMVASV
                     GYKPDRFPRGWNYAEVVDIRFIYTNLGVLDFGGPDHQVRLVAVHPGVTPEAVQEATGF
                     PLAIPAQVPTTADPTAEQLALLARFDPHDLRAHALGA"
     gene            596..1504
                     /locus_tag="VFM52_02545"
     CDS             596..1504
                     /locus_tag="VFM52_02545"
                     /inference="COORDINATES: protein motif:HMM:NF006140.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase"
                     /protein_id="HET8764074.1"
                     /translation="MSDVRDFGDAFVQREDRSVYETDTPVLYAVADGVATVTLNRPTY
                     HNAQNSQMTYALDAALRQAADDDAVRVIVLRGAGKHFSAGHDIGTPGRDLDKPYPRAS
                     LWWNHTNKPGAERLYAREQEVYLGMCRRWHDLPKPTIAMVHGACVAGGLMLAWVCDLI
                     VASEDAFFQDPVVRMGIPGVEYFAHVHEMNPRLAKEFLFLGERMSARRAHEIGMINRV
                     VPRADLEATVMAMAAKIAGQPRLGLSLTKTVVNRIEELQGLRSAMDLAFGYHHFAHAH
                     SQVLGAGELGGQDAASMIRANKQDAS"
     gene            1501..2589
                     /locus_tag="VFM52_02550"
     CDS             1501..2589
                     /locus_tag="VFM52_02550"
                     /EC_number="1.13.12.-"
                     /inference="COORDINATES: protein motif:HMM:NF015047.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016703 - oxidoreductase activity, acting
                     on single donors with incorporation of molecular oxygen,
                     incorporation of one atom of oxygen (internal
                     monooxygenases or internal mixed function oxidases)
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitronate monooxygenase"
                     /protein_id="HET8764075.1"
                     /translation="MSVSLHTPLCDLLGCRYPVVQTAMGYVAGSSLVAATCNAGGFGF
                     LAGVTIPADRVEAEILRVKELTGDKPFGLNFHMFQPNAQQLLDLAVKHRIRAVSYGRG
                     PDKKVIGRLRDAGIVCMPTVGALRHAQKAIELGANVVTVQGGEGGGHTGKVPTTILLP
                     QVVDAVNVPVVAAGGFYDGRGLVAALAYGAQGIAMGTRFLMTRDSGVPEATLARYVAT
                     RDAGQIVVSPLVDGMPQRMIPNEYLAMLQKASPFKRLRIALKLSLAWKAQTGMTSAHA
                     LKVLWQGMHGDDAGSLAQTVMAANAPMLLQRSMVAGHPDEGVMASGQVAALIGRLDSC
                     EEVIAGIVRVAGERLGVLDAMARGSTDG"
     gene            2582..3337
                     /locus_tag="VFM52_02555"
     CDS             2582..3337
                     /locus_tag="VFM52_02555"
                     /inference="COORDINATES: protein motif:HMM:NF005925.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase family protein"
                     /protein_id="HET8764076.1"
                     /translation="MAEPFTTEIHPDGVAELVLDCPPVNALNNAGWHALAATIAALGQ
                     RADVRVIVIRAEGKGFCAGVDIKELAADQSLIVSVNAGNYATFKAVHLNQVPVVAAVH
                     GFVLGGGIGICGAADIVIAADDTSFGLPEVDRGAMGGAAHLQRMFGVQKTRYLFFTGE
                     MIGAAEALRLGAIERVVPRAALRDTALAIARKIAAKSPAMIRIAKEALTGVEDGDLEA
                     KYRWEQGFTLQAYMSPDSAESRSAFVAKRDAKF"
     gene            3347..>4470
                     /locus_tag="VFM52_02560"
     CDS             3347..>4470
                     /locus_tag="VFM52_02560"
                     /inference="COORDINATES: protein motif:HMM:NF012656.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HET8764077.1"
                     /translation="MDLTYTPEQQAFRAEVRAWLAAHAPRTPLDSYDTREGFEQHRAW
                     EAELAASGYSAITWPKELGGRGAGLIDWLVFEEEYWAANAPLRVNQNGLLLLAPTLME
                     FGTAEQKERFLPRTARCEDMWAQGWSEPNAGSDMASITSRATRHGDHYVLNGQKTWST
                     RALFANWMFGLFRSDPESSRHHGLSYLLVPLDAEGITVRPIKALNGKFAFAEVFFKDV
                     HVPVANRVGEDGQGWHVAMATAGFERGLLLRSPARYQRTAKRLVELYRRHRAQGDRDG
                     TLRDAVLRAWMGAEAYTLASYHTVGRLQKGAKIGAESSTNKIFWSELDLDMHETAMHL
                     LGARAELIDDPEVHEWLEGFLFAQAGPIYAGSNEIQRNIIA"
BASE COUNT          704 a         1536 c         1589 g          641 t
ORIGIN      
        1 gagccggtgc cggtcggccc gcgcggcgac taccgcgtgc agcgcgaaag cgcgatgggc
       61 tttgcacgca tcttcgacaa cgtgtggagc ggcaagcgcc atgcgatggt gggcccgacc
      121 cagatcgacc gctggggcca ggccaacatc tcgatgatcg gcgccgacta cgcccggccg
      181 aaggtgatga tgctcggcgt gcgcgggttc cccggcaact ccatcagcca cgccaattcg
      241 ttcttcgtgc cgcaccacga cccgcgcgtg ttcgtcgccg gcgaggtcga catggtggcg
      301 tcggtcggct acaagccgga tcgcttcccg cgcggctgga actacgccga ggtggtcgac
      361 atccgcttca tctacaccaa cctcggggtg ctggatttcg gcgggcccga tcaccaggtg
      421 cgcctggtgg cggtgcaccc cggcgtcacc ccggaggcgg tgcaggaggc caccgggttc
      481 ccgctcgcga tcccggcgca ggtgccgacc acggccgacc ccaccgccga acagcttgcg
      541 ctgctcgcac gcttcgaccc gcacgacctg cgtgcccacg cgctgggggc ctgagatgag
      601 cgacgtgcgc gacttcggcg acgccttcgt ccagcgcgag gatcgttcgg tgtacgagac
      661 cgacacgccg gtgctgtacg cggtcgcgga cggcgtcgcc accgtcaccc tgaaccggcc
      721 gacgtatcac aacgcgcaga actcgcagat gacgtacgcg ctggacgcgg cgctgcgcca
      781 ggccgcggac gacgacgcgg tgcgcgtgat cgtgctgcgc ggcgcgggca agcatttctc
      841 cgccgggcac gacatcggca cgccggggcg cgacctggac aagccctatc cgcgcgcctc
      901 gctgtggtgg aaccacacca acaagcccgg cgccgagcgc ctgtatgcgc gcgaacagga
      961 ggtctacctc ggcatgtgcc ggcgctggca cgacctgccg aagccgacca tcgcgatggt
     1021 gcacggcgcc tgcgtcgccg gcgggctgat gctggcctgg gtctgcgacc tgatcgtcgc
     1081 cagcgaggat gcgttcttcc aggacccggt ggtgcgcatg ggcattcccg gcgtggagta
     1141 tttcgcccac gtgcacgaga tgaacccgcg cctggccaag gagttcctgt tcctgggcga
     1201 gcgcatgagc gccaggcgcg cgcatgagat cggcatgatc aaccgcgtgg tgccgcgcgc
     1261 ggacctcgaa gccacggtga tggcgatggc ggcgaagatc gccggccagc cgcgcctcgg
     1321 cctgtcgctg accaagaccg tggtcaatcg catcgaggag ctgcagggcc tgcgcagcgc
     1381 gatggacctg gcattcggct accaccactt tgcgcacgcg cacagccagg tgctgggcgc
     1441 cggcgagctg ggcgggcagg acgccgcctc gatgatccgc gccaacaagc aggacgcctc
     1501 gtgagcgtga gcctgcacac gccgctgtgc gacctgctcg gctgccgcta tccggtggtg
     1561 cagaccgcaa tgggctacgt cgccggttcc tcgctggtgg cggccacgtg caacgccggt
     1621 ggtttcggtt ttctcgccgg cgtgacgatt ccggccgacc gcgtggaagc ggaaatcctg
     1681 cgcgtcaagg aactcaccgg cgacaagccg ttcggcttga acttccacat gttccagccg
     1741 aacgcgcagc aactgctcga cctcgcggtg aagcaccgga tccgcgcggt gagctacggg
     1801 cgcgggccgg acaagaaggt gatcggccgc ctgcgcgatg ccggcatcgt gtgcatgccc
     1861 acggtcggcg cgctcaggca cgcgcaaaag gcgatcgagc tgggcgcgaa cgtggtcacc
     1921 gtgcagggcg gcgagggcgg cgggcacacc ggcaaggtgc ccaccaccat cctgctgccg
     1981 caggtggtgg acgcggtgaa cgtgccggtg gtcgccgccg gcgggttcta cgacggccgc
     2041 gggctggtcg cggcgctggc ctacggcgcg cagggcatcg cgatgggcac gcggttcctg
     2101 atgacgcgcg attccggcgt gcccgaggcg acgctggcgc gctacgtcgc cacccgcgat
     2161 gccgggcaga tcgtggtctc gccgctggtc gacggcatgc cgcagcggat gatcccgaac
     2221 gaatacctgg cgatgctgca gaaggcctcg ccgttcaagc gcctgcgcat tgcgctcaag
     2281 ctgtcgctgg cgtggaaggc gcagaccggc atgaccagcg cgcatgcgct caaggtgctg
     2341 tggcagggca tgcacggcga cgacgccggc agcctggcgc agacggtgat ggccgcgaac
     2401 gcgccgatgc tgctgcagcg ctcgatggtg gccggccacc cggacgaggg cgtgatggcc
     2461 tcgggccagg tcgctgcgtt gatcggccgc ctggactcct gcgaggaagt gatcgccggc
     2521 atcgtccgtg tggcgggcga gcggctgggc gtactggatg caatggcgcg aggaagcacc
     2581 gatggctgag cccttcacca ccgagatcca ccccgacggc gtcgccgagc tggtgctcga
     2641 ctgcccgccg gtcaacgcgc tgaacaatgc cggctggcat gcgctggccg ccaccatcgc
     2701 cgcgctcggt cagcgcgccg acgtgcgcgt gatcgtgatc cgcgccgaag gcaagggttt
     2761 ctgcgccggc gtcgacatca aggagctggc cgccgaccaa agcctgatcg tcagcgtcaa
     2821 cgccggcaac tacgccacct tcaaggcggt gcacttgaac caggtgccgg tggtcgcggc
     2881 ggtgcacggc ttcgtgctcg gcggcggcat cggcatctgc ggcgcggccg acatcgtgat
     2941 cgcggcggac gacaccagct tcggcctgcc cgaggtcgac cgcggcgcga tgggcggcgc
     3001 ggcgcacctg cagcgcatgt tcggcgtgca gaagacccgc tacctgtttt tcaccggcga
     3061 gatgatcggc gccgccgagg cgttgcgcct gggcgcgatc gagcgcgtgg tgccgcgcgc
     3121 cgcgctgcgc gacaccgcac tggcgatcgc gcgcaagatc gccgcgaaga gcccggcgat
     3181 gatccgcatc gccaaggaag ccttgaccgg cgtcgaggat ggcgacctgg aggccaagta
     3241 ccgttgggag cagggcttca ccttgcaggc gtacatgagc ccggactccg ccgagagccg
     3301 cagcgcgttc gtcgccaagc gcgacgcgaa attctgaggg tcacccatgg atctcaccta
     3361 cacccccgag cagcaggcgt ttcgcgccga ggtgcgcgcg tggctcgccg cgcacgcgcc
     3421 gcgcacgccg ctggacagct acgacacccg cgagggcttc gagcagcacc gcgcgtggga
     3481 ggccgaactg gccgccagcg gctacagcgc gatcacctgg ccgaaagagc ttggcggccg
     3541 cggcgccggc ctgatcgact ggctggtgtt cgaggaggag tactgggccg ccaatgcgcc
     3601 gctgcgcgtc aaccagaacg gcctgctgct cttggcgccg acgctgatgg aattcggcac
     3661 cgccgagcag aaagagcgct tcctgccgcg caccgcgcgc tgcgaggaca tgtgggcgca
     3721 gggctggagc gagccgaatg ccggctccga catggcgtcg atcacctcgc gcgccacccg
     3781 ccacggcgac cactacgtgc tgaacggaca gaagacctgg tccacccgtg cgctgttcgc
     3841 caactggatg ttcggcctgt tccgcagcga cccggagtcc agccgccacc acgggctcag
     3901 ctacctgctg gtgccgctgg atgccgaggg catcacggtg cgcccgatca aggcgctgaa
     3961 cggcaagttc gcgtttgccg aggtgttctt caaggacgtg cacgtgccgg tggccaaccg
     4021 cgtcggcgag gacggccagg gctggcacgt ggcgatggcc accgcgggct tcgagcgcgg
     4081 cctgctgctg cgctcgccgg cgcgctacca gcgcaccgcg aagcgcctgg tcgagctgta
     4141 tcgccgccac cgtgcgcagg gcgaccgcga cggcacgctg cgcgacgccg tgctgcgcgc
     4201 gtggatgggc gccgaggcgt acacgctggc ctcgtaccac accgtcggcc gcctgcagaa
     4261 gggcgcgaag atcggcgcgg aatccagcac caacaagatt ttctggtccg aactcgacct
     4321 cgacatgcac gagaccgcga tgcacctgct tggcgcgcgc gccgagctga tcgacgaccc
     4381 ggaagtgcac gagtggctgg aagggttcct gttcgcgcag gccgggccga tctacgcggg
     4441 cagcaacgag atccagcgca acatcatcgc
//
LOCUS       DASSVL010000152         3315 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1260420,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000152 DASSVL010000000
VERSION     DASSVL010000152.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3315)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3315)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3315
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1260420"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..391
                     /locus_tag="VFM52_02565"
     CDS             <1..391
                     /locus_tag="VFM52_02565"
                     /EC_number="1.1.1.86"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019465727.1"
                     /note="catalyzes the formation of
                     (R)-2,3-dihydroxy-3-methylbutanoate from
                     (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and
                     isoleucine biosynthesis; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ketol-acid reductoisomerase"
                     /protein_id="HET8764078.1"
                     /translation="AGYQPEIAYYEVFHELKLIVDLFYEGGIAKMLKYVSETAQYGDF
                     VSGPRVIDKGVKERMKAVLKDIQDGTFARNWTAEYKAGLPNYNQYKQADLDHQLEQVG
                     AKLRARMTWLHGDAPVAAVPQKKQAVG"
     gene            457..798
                     /locus_tag="VFM52_02570"
     CDS             457..798
                     /locus_tag="VFM52_02570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008211729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8764079.1"
                     /translation="MKRFHIALIVADLDAAIADYSKRLGQHPQAVVADTYAMWRTELL
                     NFSISQDPARAGQLRNLGFEEDEAEGFHSETDVSGIAWERFSALTQDLEVIRTYGIPV
                     HPAHPEELIRN"
     gene            849..2702
                     /gene="ilvB"
                     /locus_tag="VFM52_02575"
     CDS             849..2702
                     /gene="ilvB"
                     /locus_tag="VFM52_02575"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019465728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005948 - acetolactate synthase complex
                     [Evidence IEA];
                     GO_function: GO:0003984 - acetolactate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009097 - isoleucine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009099 - valine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biosynthetic-type acetolactate synthase large
                     subunit"
                     /protein_id="HET8764080.1"
                     /translation="MQTALAASATHPHPLAGQAMSGAEIVVQVLADEHGGVLFGYSGG
                     AILPVYDAVFRFNAEHRDAGGGEPLPLVVPANEQGAGFMASGYARASGKVGVVLVTSG
                     PGATNLVTPIRDAMADSVPIVAICGQVPTSALGSDAFQEAPVANIMGACAKHVFLVSD
                     PLKLEATLRTAFEIARSGRPGPVVVDIPKNVQNAALQFDGECRLPIPGYRSRLSAVES
                     AKLGDDACTSFFAALAQAKRPLIYAGGGVVAAGAAPALTAFAETFGIPVTTSLMGLGD
                     YDTTKPLALHMLGMHGTAYANYAVEDCDFLIALGARFDDRVAGVPDKFAAHARFIAQI
                     DIDPAEIGKVKAVDWQHIGPLAAALDRLTAWGRAHRRAADLGAWQAHVAALKRDHAMN
                     YDRANPLIQPQAVLEAINRQTRGHAIIATGVGQHQMWAAQYFDFKAPRQWLTSGSMGT
                     MGFGLPAAIGAQFARPDALVIDIDGDGSIRMNVGELETVTTYDLPLKIVLLNNGVDGM
                     VRQWQKLFFKSRFSATDKSLRKKDFIAAAQADGFAWAQRLERPADIEATIAAFLAHRG
                     PAFLEVMIDPDAGVYPMVGPGASYAQMITGDFIPARAAPAAVPEPSATHMF"
     gene            2735..3013
                     /gene="ilvN"
                     /locus_tag="VFM52_02580"
     CDS             2735..3013
                     /gene="ilvN"
                     /locus_tag="VFM52_02580"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008211731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005948 - acetolactate synthase complex
                     [Evidence IEA];
                     GO_function: GO:0003984 - acetolactate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009097 - isoleucine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009099 - valine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase small subunit"
                     /protein_id="HET8764081.1"
                     /translation="MKHTLSILLQNESGALVRVAGLFAARHVNIDALTVAATHDPAVS
                     QLTLVLHGDAGTLEQILRQLRKLVDVLDASSLSLLGGGSQPMLAATPA"
     gene            3010..>3315
                     /locus_tag="VFM52_02585"
     CDS             3010..>3315
                     /locus_tag="VFM52_02585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008211732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal-phosphate dependent enzyme"
                     /protein_id="HET8764082.1"
                     /translation="MNARLADDACVEFGAPDDLDLLRRALAARVYEVAQETPLEPAAL
                     LAERLGRQVLLKREDLQRVFSFKLRGAYNKMVNLSRASLRRGVICASAGNHAQGVAYA
                     "
BASE COUNT          541 a         1230 c         1075 g          469 t
ORIGIN      
        1 agccggctac cagcccgaga tcgcctacta cgaggtgttc cacgagctga agctgatcgt
       61 cgacctgttc tacgaaggcg gcatcgccaa gatgctgaag tacgtctccg agaccgcgca
      121 gtacggcgat ttcgtctccg gcccgcgggt gatcgacaag ggcgtcaagg aacgcatgaa
      181 ggcggtcctg aaggatatcc aggacggcac cttcgccagg aactggacgg ccgaatacaa
      241 ggccggcctg cccaactaca accagtacaa gcaggccgat ctcgaccacc agctcgagca
      301 ggtcggcgcc aagctgcgcg cgcgcatgac ctggctgcac ggcgacgccc cggtggccgc
      361 cgtgccgcag aaaaagcaag ccgtcggctg aggccgacca cgggccgcgg cagttgccgc
      421 gacccgctcc cccgcactga tcgaacgagg tacgccatga aacgctttca cattgccctg
      481 atcgttgccg acctggatgc cgccatcgcc gactacagca agcgcctcgg ccagcatccg
      541 caagccgtgg ttgcggacac ctacgcgatg tggcgcaccg agctgctcaa tttctcgatc
      601 agccaggacc cggcgcgcgc cggccagctg cgcaacctcg gcttcgagga ggacgaggcg
      661 gaaggcttcc acagcgaaac cgacgtgagc ggcatcgcct gggagcgctt ctccgcgctg
      721 acccaggacc tcgaagtgat ccgcacctac ggcatccccg tgcatccggc ccatccggag
      781 gaactcatcc gcaactgacc ccgctgtcac cccctatacc cagccatcag gacccgctcg
      841 tgaccaccat gcagaccgct ttggcagcat ccgccaccca tccccacccc ctcgccggcc
      901 aggccatgag cggcgcggag atcgtggtgc aggtccttgc ggacgagcac ggcggcgtgc
      961 tgttcggcta ctccggcggc gcgatcctgc cggtctacga cgcggtgttc cgcttcaacg
     1021 cggagcatcg cgatgccggc ggcggcgagc cgctgccact ggtggtgccg gccaacgaac
     1081 agggcgccgg cttcatggcc tcgggctacg cgcgcgcttc cggcaaggtc ggcgtcgtcc
     1141 tggtcacctc cgggccgggc gccaccaatc tcgtcacgcc gatccgcgac gcgatggccg
     1201 actcggtgcc gatcgtcgcc atctgcggcc aggtgccgac ctcggcgctc ggcagcgacg
     1261 cgttccagga agcgccggtg gcgaacatca tgggcgcctg cgcgaagcat gtgttcctgg
     1321 tctccgatcc gctgaagctc gaagccacgc tgcgcaccgc gttcgagatc gcgcgcagcg
     1381 gccgtcccgg gccggtcgtg gtcgacatcc cgaagaacgt gcagaacgcg gccctgcagt
     1441 tcgacggcga atgccgcctg ccgatccccg gctaccgctc gcggctcagc gcggtggagt
     1501 cggcgaaact cggcgacgac gcctgcacca gcttcttcgc cgcgctcgcc caggcgaagc
     1561 ggccgctgat ctacgccggc ggcggcgtgg tggccgccgg cgcggcgccg gcgctcaccg
     1621 ccttcgccga gaccttcggc atcccggtca ccacctcgct gatgggcctg ggcgactacg
     1681 acaccaccaa gccgctcgcg ctgcacatgc tcggcatgca cggcaccgcg tacgcgaact
     1741 acgcggtgga ggattgcgac ttcctcatcg cgctcggcgc gcgcttcgac gaccgcgtcg
     1801 ccggcgtgcc ggacaagttc gccgcgcacg cgcgcttcat cgcgcagatc gacatcgacc
     1861 cggccgagat cggcaaggtc aaggcggtcg actggcagca catcggtccg ctggccgccg
     1921 cgctcgaccg gctcaccgcg tggggccgcg cgcatcgtcg cgcggccgat ctcggcgcct
     1981 ggcaggcgca cgtggcggca ctcaaacgcg accacgcgat gaactacgac cgcgcaaacc
     2041 cgctgatcca gccgcaggcc gtgctcgaag cgatcaaccg gcagacccgg ggccacgcga
     2101 tcatcgccac cggcgtcggc cagcaccaga tgtgggcggc gcagtatttc gacttcaagg
     2161 cgccgcggca gtggctcacc tcgggctcga tgggcacgat gggcttcggc ctgccggccg
     2221 cgatcggcgc gcagttcgcg cggccggacg cgctggtgat cgacatcgac ggcgacggct
     2281 cgatccggat gaacgtcggc gagctggaaa ccgtcaccac ctacgacctg ccgctgaaga
     2341 tcgtgctgct caacaacggc gtcgacggca tggtgcggca gtggcagaag ctgttcttca
     2401 agagccgctt ctcggccacc gacaagagcc tgcgcaagaa ggatttcatc gccgccgcgc
     2461 aagccgacgg cttcgcctgg gcgcagcggc tcgaacgccc ggctgacatc gaggcgacca
     2521 tcgccgcctt cctcgcccac cgcggcccgg ccttcctcga agtgatgatc gacccggatg
     2581 ccggcgtcta cccgatggtc ggccccggcg cgagctacgc gcagatgatc accggcgact
     2641 tcatccccgc gcgcgccgca ccggcggcag tgcccgagcc gtcggccacc cacatgttct
     2701 gaaccggcgc gcacgccggt tcgcggagac tgccatgaag cacacgctgt ccatcctgct
     2761 gcaaaacgaa tccggcgcgc tggtgcgcgt cgccggcctg ttcgccgcgc gccacgtcaa
     2821 catcgacgcg ctcaccgtgg ccgccaccca cgaccccgcc gtctcccagc tcaccctggt
     2881 gctgcacggc gacgccggca cgctggagca gatcctgcgc cagctgcgca agctggtgga
     2941 cgtgctggac gccagcagcc tctcgctgct gggcggtggc agccagccca tgctcgccgc
     3001 caccccggca tgaacgcacg cctcgccgac gacgcctgcg tcgagttcgg cgcgcccgac
     3061 gacctcgacc tgctgcgccg cgcgctggcc gcgcgcgtct acgaagtggc gcaggaaacc
     3121 ccgctggagc cggccgccct gctcgccgag cggctgggcc ggcaggtgct gctcaagcgc
     3181 gaggacctgc agcgggtgtt ctcgttcaag ctgcgcggcg cctacaacaa gatggtgaac
     3241 ctctcgcgcg cgagtctgcg gcgtggtgtc atctgcgcat cggcgggcaa tcatgcgcaa
     3301 ggcgtggcgt acgcc
//
LOCUS       DASSVL010000153         2006 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_723770, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000153 DASSVL010000000
VERSION     DASSVL010000153.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2006)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2006)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2006
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_723770"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..399
                     /locus_tag="VFM52_02590"
     CDS             <1..399
                     /locus_tag="VFM52_02590"
                     /inference="COORDINATES: protein motif:HMM:NF012339.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster binding
                     domain-containing protein"
                     /protein_id="HET8764083.1"
                     /translation="LQAIEMPPERIHVERFSSLPDEEDTAEINATAAAGAPAPVVTEA
                     DVEIVLDGEVHHVKCAGDQPILDAALAAGIAAPHSCRAGMCASCMCQVTEGSVFLRHN
                     EVLDKKDLAKAWTLACQALPTSAHVKVEFP"
     gene            396..2000
                     /locus_tag="VFM52_02595"
     CDS             396..2000
                     /locus_tag="VFM52_02595"
                     /inference="COORDINATES: protein motif:HMM:NF005801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FadD3 family acyl-CoA ligase"
                     /protein_id="HET8764084.1"
                     /translation="MTDAAHAYPADLPRTLPEVIQRAAAQWPERAAIVDGPLRIGYAE
                     LAAHSQRIARSLIALGVGAGDRVAIWAPNIAEWILAACGIHAAGAILVPVNTRMKGAE
                     AADMLARSGTRVLISIGDFLGHDYPAMLAGEVRPACLEHLVVVRGTPAAGNLGWDDFL
                     ARGDAVPPAEVAERLAGLGPDSIADLLFTSGTTGRPKGVMCTHGATIRAFTAWSGAVA
                     LRTGDRYLIINPFFHSFGYKAGWIAAFLRGATVYPHAVFDVDAVLALIQRERINFLPG
                     PPTLFLSMLAHPALKSFDISSLTGAVTGASVVPPILIRRMREELGIDHVTTAYGLTEC
                     GGCATVCDPGDDAETVAGTCGHALPGTEVRCVDTDNQPVATGEAGEVCLRGYHVMRGY
                     FQDPVATAKAIDADGWLHTGDVGVLDARGYLRITDRLKDMFIVGGFNCYPAEIERMLS
                     EHPAIAQVAVIGVPDARMGEVGCACVVLRAGAVLDEAGLIAWSREHMANYKVPRHVRL
                     LPALPMGATAKVDKRALAEQVRATLG"
BASE COUNT          291 a          766 c          673 g          276 t
ORIGIN      
        1 ctgcaggcaa tcgagatgcc gcccgaacgc atccacgtcg agcgcttcag ctcgctgccc
       61 gacgaggaag acaccgccga aatcaacgcc acggccgccg ccggggcgcc ggcgccggtg
      121 gtcaccgagg ccgacgtgga aatcgtgctc gacggcgagg tgcaccacgt gaagtgcgcc
      181 ggcgaccagc ccatcctcga cgccgcactg gctgccggca tcgccgcgcc gcactcctgc
      241 cgcgccggca tgtgcgcctc gtgcatgtgc caggtgaccg aaggcagcgt gttcctgcgc
      301 cacaacgagg tgctggacaa gaaggacctg gccaaggcgt ggacgctggc ctgccaggcg
      361 ttgccgacca gcgcccacgt gaaggtggaa ttcccatgac cgacgccgcg catgcctacc
      421 cggcggacct gccgcgcacg ctgcccgagg tgatccagcg cgccgcggcg cagtggccgg
      481 agcgcgccgc catcgtcgat ggcccgctgc gcatcgggta cgccgagctg gcggcgcaca
      541 gccaacgcat cgcccgcagc ctgatcgcgc tcggcgtcgg cgccggcgac cgcgtggcga
      601 tctgggcgcc gaacatcgcc gagtggatcc tcgccgcgtg cggcatccac gccgccggcg
      661 cgatcctggt gccggtcaac acccgcatga aaggcgccga agccgccgac atgctggcgc
      721 gcagcggcac ccgcgtgctg atctcgattg gcgatttcct cggccacgac tacccggcca
      781 tgctcgccgg cgaggtgcgc ccggcctgcc tcgaacacct cgtggtggtg cgcggcacac
      841 cggccgccgg caacctcggc tgggacgatt tcctcgcccg cggcgacgcc gtgccgccgg
      901 ccgaggtggc cgagcggctg gccggcctcg gcccggacag catcgcggac ctgctgttca
      961 cgtcgggcac caccggccgc cccaagggcg tcatgtgcac ccacggcgcc accatccgcg
     1021 cgttcaccgc gtggagcggc gcggtggcgc tgcgcaccgg cgaccgttat ctcatcatca
     1081 acccgttctt ccattccttc ggctacaagg ccggctggat cgccgccttc ctgcgcggcg
     1141 ccaccgtgta tccgcacgcc gtgttcgacg tggacgcggt gctggcgctg atccagcgcg
     1201 agcggatcaa tttcctgccc ggcccgccga cgctgttcct gtcgatgctg gcgcacccgg
     1261 cgctgaaatc cttcgacatc tcctcgctca ccggcgcggt caccggcgcc tcggtggtgc
     1321 cgccgatcct gatccggcgc atgcgcgagg agctcggcat cgaccacgtc accaccgcct
     1381 acgggctcac cgaatgtggc ggctgcgcga ccgtgtgcga tccgggcgac gacgcggaaa
     1441 ccgtcgccgg cacctgcggc cacgccctgc ccggcaccga ggtgcgctgt gtcgacaccg
     1501 acaaccagcc ggtggcgacc ggcgaagccg gcgaggtgtg cctgcgcggc taccacgtaa
     1561 tgcgcggcta cttccaggac ccggtcgcga ccgccaaggc gatcgacgcc gacggctggc
     1621 tgcacaccgg cgacgtcggc gtgctcgacg cgcgcggcta cctgcgcatc accgaccgcc
     1681 tcaaggacat gttcatcgtg ggcggcttca actgctaccc ggccgaaatc gaacgcatgc
     1741 tgtccgagca ccccgccatc gcccaggtcg ccgtgatcgg cgtacccgac gcgcgcatgg
     1801 gcgaggtcgg ctgcgcctgc gtggtgctgc gcgccggcgc cgtgctcgac gaagccggcc
     1861 tcatcgcctg gtcgcgcgag cacatggcca actacaaggt cccgcgccac gtccgcctgc
     1921 tccccgccct gccgatgggc gccaccgcca aggtcgacaa gcgcgcattg gccgagcagg
     1981 tgcgggcgac gctgggatga tttccg
//
LOCUS       DASSVL010000154         2983 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_695663, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000154 DASSVL010000000
VERSION     DASSVL010000154.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2983)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2983)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2983
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_695663"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1491
                     /locus_tag="VFM52_02600"
     CDS             <1..1491
                     /locus_tag="VFM52_02600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008434581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_process: GO:0006415 - translational termination
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 3"
                     /protein_id="HET8764085.1"
                     /translation="IQLAGAVKGRKSARHATSDWMALEQERGISVTSSVMQFPYAGKI
                     VNLLDTPGHADFSEDTYRVLTAVDSALMVIDCAKGVEERTIKLMEVCRLRDTPIMTFI
                     NKLDREGRSPIELLDEVESVLGIACAPVTWPIGMGKRLKGVYHLLLDEVHVFEPGKNF
                     TRQDSTIFKGLDAPGLEAAIGAEALREVREELELIRGAAPAFDADEYLAGRLTPVFFG
                     SAVNNFGVQLLLDFFVDHAPSPRPHATTTREVDPEETRLSGFVFKIQANMDPGHRDRV
                     AFMRVCSGTYTSGMRMIQTRTSKEVRIANALTFMASDREIVETAYPGDVIGLHNHGTI
                     SIGDTFTEGEPLRFTGIPNFAPELFRRAHLKDPLKMKALHKGLAQLSEEGATQFFRPL
                     MSNDLILGAVGVLQFDVVAYRLKDEYGVDAVFENVGVATARWVYCDDDKTLEEFREKN
                     ALHLAIDAAGELVYLAPSRVNLQLAQERAPKVRFSATREHAVAIEV"
     gene            1711..2652
                     /locus_tag="VFM52_02605"
     CDS             1711..2652
                     /locus_tag="VFM52_02605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008215778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0071586 - CAAX-box protein processing
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II CAAX endopeptidase family protein"
                     /protein_id="HET8764086.1"
                     /translation="MPAAPLAFVPPPHTPRWLRLALYSPPARIALFVAALTVTTLAFG
                     ALVQVMLGTAPVPMSTAIGTVRYLASFVLPATLAYWFLVHVIEQRAATELAPRQLLRG
                     VAVGVAFGLVLFSAVVGVLWLAGSYRGSGTNPGAHWLVALLGVGLGAAVGEEILLRGV
                     LFRVIEEGLGTWWALAISALFFGFAHAGNPNATLWSSVAIAIEAGVLFALVYHLTRSL
                     WPCIGLHAAWNFAQGTIYGIPVSGTAANGWLVSTRSGPDWLSGGAFGAEASVVAIALC
                     SVCSLALLGIARRRGSIVPPAWRRSRTAATPLPEPLR"
     gene            2711..>2983
                     /locus_tag="VFM52_02610"
     CDS             2711..>2983
                     /locus_tag="VFM52_02610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8764087.1"
                     /translation="MPNPSRRDSWLANQPIQRKLLLAITLLLGVALAALLATLNSLRV
                     QNDARHWYMHTSNVLREIDDIHDATKAAQVGVRGYLLGGRDAEREAY"
BASE COUNT          444 a         1033 c         1028 g          478 t
ORIGIN      
        1 atccagctgg ccggcgcggt gaaggggcgc aagagcgcgc gccacgccac ctcggactgg
       61 atggcgctgg aacaggagcg cggcatctcg gtcaccagct cggtgatgca gttcccgtac
      121 gccggcaaga tcgtcaacct gctggacacc ccggggcacg cggacttctc ggaagacacc
      181 taccgcgtgc tcaccgcggt ggattcggcg ctgatggtga tcgactgcgc gaagggcgtg
      241 gaggagcgca cgatcaagct gatggaggtg tgccgcctgc gcgacacgcc gatcatgacc
      301 ttcatcaaca agctcgaccg cgagggccgc tcgccgatcg agctgctgga cgaggtggaa
      361 tcggtgctcg gcatcgcctg cgcgccggtg acctggccga tcggcatggg caagcggctg
      421 aagggcgtgt accacctgct gttggacgag gtgcacgtgt tcgagccggg caagaacttc
      481 acccgccagg actccaccat cttcaagggc ctggacgcgc cggggctgga ggcggcgatc
      541 ggcgccgagg cgctgcgcga ggtgcgcgag gagctggagc tgatccgcgg cgccgcgccg
      601 gcgttcgatg ccgacgagta ccttgccggc cggctcacgc cggtgttctt cggttccgcg
      661 gtcaacaact tcggtgtgca gctgctgctc gatttcttcg tcgaccatgc gcccagcccg
      721 cgcccgcacg cgacgacgac gcgcgaggtc gatcccgagg aaacccggct cagcggcttc
      781 gtgttcaaga tccaggcgaa catggacccc ggccaccgcg accgcgtggc gttcatgcgc
      841 gtgtgctcgg gcacctacac ctcgggcatg cgcatgatcc agacccgcac cagcaaggaa
      901 gtgcgcattg ccaacgcgct gaccttcatg gcgagcgacc gcgagatcgt cgagaccgcc
      961 taccccggcg acgtgatcgg cctgcacaac cacggcacca tctccatcgg cgacaccttc
     1021 accgaaggcg agccgctgcg cttcaccggc atccccaact tcgcgccgga gctgttccgc
     1081 cgcgcgcacc tcaaggaccc gctgaagatg aaggcgctgc acaagggcct ggcgcagttg
     1141 tccgaggaag gcgccacgca gttcttccgc ccgctgatgt cgaacgacct gatcctcggc
     1201 gcggtcggcg tgctgcagtt cgacgtggtc gcctatcgcc tgaaggacga atacggcgtg
     1261 gacgcggtat tcgagaacgt tggcgtggcc accgcgcgct gggtgtactg cgacgacgac
     1321 aagacgctgg aggagttccg cgagaagaac gcgctgcacc tcgcgatcga tgccgccggc
     1381 gagctggtct acctggcacc gtcgcgggtg aacctgcagc tggcgcagga gcgcgcaccg
     1441 aaggtgcggt tctccgccac gcgcgagcac gcggtggcga tcgaggtctg acgcgcaacg
     1501 gcgcacctcg actggcgctg atgaagccgc ctgccgcaag gatgcgatgc cggcaaaggc
     1561 gcgctggcgc ggaccccggc acgcgagggc tgcagtacac cgaatgccct gccaggcccg
     1621 acccgatgcc acgctgccgg aagcgcgccc ctccgcggcc gggccggcca cgcgctgcgg
     1681 taggctgcac gttttcctgg aagcgtcgcc atgcccgctg ccccgcttgc cttcgtcccg
     1741 ccaccgcaca cgccacgctg gctgcgtctc gcgttgtatt cgccgccggc gcgcatcgcg
     1801 ctcttcgtgg ccgcgctgac ggtcaccacg ctggcgttcg gcgcgctggt gcaggtgatg
     1861 ctgggcaccg caccggttcc gatgagcacc gcaatcggca ccgtgcgcta tctcgccagc
     1921 ttcgtgctgc cggccacgct ggcctactgg ttcctggtgc acgtgatcga acagcgcgcg
     1981 gccaccgaac tggcgccgcg ccagttgttg cgcggcgtcg cggtcggcgt ggccttcggg
     2041 ctggtgctgt tcagcgccgt ggtgggcgtg ctgtggcttg ccggcagtta tcgcgggtcc
     2101 ggcaccaacc cgggcgcgca ctggctggtc gcgttgctcg gcgtcggcct gggcgcggcg
     2161 gtcggcgagg aaatcctgct gcgcggcgtg ctgttccggg tgatcgagga aggcctcggc
     2221 acctggtggg cgctggccat ctccgcactg tttttcggct tcgcgcacgc gggcaacccg
     2281 aacgcgacgc tgtggagttc ggtcgcgatc gcgatcgagg ccggcgtcct gttcgcgctg
     2341 gtgtaccacc tcacccgctc gctgtggccg tgcatcggcc tgcatgcggc gtggaacttc
     2401 gcccagggca cgatctacgg catcccggtg tcgggcaccg cggccaatgg ttggctggtg
     2461 tccacgcgca gcgggccgga ctggctctcc ggtggcgcct tcggggccga ggcgtcggtg
     2521 gtggctatcg cactgtgcag cgtgtgctcg ctcgcgctgc tcggcattgc ccggcgccgc
     2581 ggctcgatcg tgccgccggc gtggcgacga tcccgcaccg ctgccacgcc actgccggaa
     2641 ccgctacgct gacgtcacgg catgacagtc acccatcgcc gcaccgtcac cttgcgaccg
     2701 caccgcgatc atgcccaacc catcccgccg tgattcatgg ctcgccaacc agccgatcca
     2761 gcgcaagctg ctgctggcca tcacgctgct gctcggcgtc gcgttggcgg cgctgctggc
     2821 cacgctgaat tcgctgcgcg tgcagaacga cgcgcgccac tggtacatgc acaccagcaa
     2881 cgtactgcgg gagattgacg acatccacga tgcgacgaag gcggcacagg tcggcgtgcg
     2941 tggttatctg ctgggcggac gcgacgcgga acgcgaggcg tac
//
LOCUS       DASSVL010000155         3987 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_427288, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000155 DASSVL010000000
VERSION     DASSVL010000155.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3987)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3987)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3987
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_427288"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..622)
                     /locus_tag="VFM52_02615"
     CDS             complement(<1..622)
                     /locus_tag="VFM52_02615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019465707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine dehydrogenase"
                     /protein_id="HET8764088.1"
                     /translation="MAIPTPLSRTLAAGVIGPGRVGGALLRQLRAAQPRLQRDMGLTL
                     QLCGVATRQRMWLDCDDPELDARDGAQTWRPADLEAFADHVHGDGRAALLVDCSASED
                     VAARYPFWLAAGIHVVTPNKLAGSGPLDRWRTIRAACAGGARFRQETTVCAGLPVVQT
                     LRDLLDTGDELLGIEGMFSGTLAWLCNRHDGRQPFSALLREAHALGY"
     gene            complement(1031..1939)
                     /locus_tag="VFM52_02620"
     CDS             complement(1031..1939)
                     /locus_tag="VFM52_02620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008208162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /protein_id="HET8764089.1"
                     /translation="MELRELETFRAVVESGGMNRAATRLNRAQSSITARIRQLEASLG
                     VPLFEHEGRRLRLTAAGDALVGYADRLLSLADETRAAVRRDKPCGRLRLGTMESVAAS
                     RLPRPLAGFHQRHPEISVELQTAHSRELLARLQAGALDLAIVSDEVDDERFVSVPWHV
                     EELVLVAAAGDAVRDPRRMTGGTLLVLGGNGCAYRRRFEQWLQNLRVVPARELEFASY
                     HAILTAAASGVGVGLIPRSVLDIYARRDAVSVHKVPARIARVRTAVVTLRGRHVPALT
                     RLVECLRRDLSSSRHGNRKGGVARAH"
     gene            2035..3255
                     /locus_tag="VFM52_02625"
     CDS             2035..3255
                     /locus_tag="VFM52_02625"
                     /inference="COORDINATES: protein motif:HMM:NF018485.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbfB/YjiJ family MFS transporter"
                     /protein_id="HET8764090.1"
                     /translation="MNSELRTALTGMAILALALGIGRFVLTPLLPLMQTDDGLTLIAG
                     GWLASTNMLGYLLGALLCALRPLPPRLSLRIGAIGVALATLGMGLTTRLDIWLLWRFA
                     AGIASAALVVHGIAWSMARLRAAGRPLLEHVMFSGTGVGIVGSGLLVAAARPAGASSA
                     GLWILFGIITVVLFAWTWRRLGEDAATAASGTPVPARAALPSGPTWTLVAMYGLLGFA
                     YTIPAAFLPLIAEHQLHLPALREWFWPLFGVAMAVSTLALRWLPARIDNRTVLAAGSV
                     SLAGGMLLSVAAHGVVPLVSATLLIGIATMPVVMYTMREARLLAPRNPVRLIAALTTT
                     LGIGQVAGPAFAAWLAARTGGFDLPLIVGTAASMAGMACMLIRRSGADVGVSTTPASG
                     GTSPDHPRLCERRL"
     gene            3377..>3987
                     /locus_tag="VFM52_02630"
     CDS             3377..>3987
                     /locus_tag="VFM52_02630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008208037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase N"
                     /protein_id="HET8764091.1"
                     /translation="MDTETTVDRFPAESVVRLADYRPPAWRITHVELKFELGIDETLV
                     HSKLALAQDRDEPLRLDGEDVALLAARLDGRALAPADYAIDAAGLAIQGARDGSVLEL
                     TVRIDPARNSQLCGLYLSGKREHGFLLTQCEAQGFRRITFFPDRPDVLARYDVTLVAD
                     KARFPVLLAGGEETESGDLPDGRHFARFVDPHPKPSYLFALVAG"
BASE COUNT          589 a         1357 c         1360 g          681 t
ORIGIN      
        1 tgtagcccag cgcgtgtgct tcgcgcaaca gcgcggaaaa cggctgccgg ccgtcatgcc
       61 gattgcacaa ccaggccagc gtgcccgaaa acatgccttc gatgcccagc agttcgtcgc
      121 cggtgtcgag caggtcgcgc aacgtctgca cgaccggcag gccggcgcac acggtggttt
      181 cctggcgaaa gcgtgcgccc ccggcgcagg cggcgcggat cgtgcgccag cgatccagcg
      241 ggccgctgcc ggcaagcttg ttcggcgtca ccacatggat gccggccgcc agccagaacg
      301 gatagcgcgc ggcgacatcc tcgctggcgc tgcaatccac cagcagcgcg gcgcgcccgt
      361 ctccgtgcac gtggtccgcg aaggcttcga ggtcggcggg gcgccaggtc tgggcgccgt
      421 cgcgggcatc gagttcgggg tcgtcgcaat ccagccacat gcgctggcgg gtagcgacgc
      481 cgcaaagctg cagggtcagg cccatgtcgc gttgcagccg cggctgcgcg gcgcgaagtt
      541 ggcgaagcaa cgcgccaccc acccgaccgg ggccgatcac gcccgccgcg agcgtgcgcg
      601 acagcggggt gggtatcgca atcggctgca gggattccgg tggccgggca gggcggtgtg
      661 cggcgagggg cgaagcgtcg gcgttcacgg tgacctccta tcgaggtccc gtctcgctgg
      721 cgggtgtcgg atcgcgccgg cccgcctcgt cgagggcggg accgttgcgt gctgaggatt
      781 attcgcgcac gaacgcccgc ccgtttccgg tggtcgtggt cgtggtaatg atcgtggtga
      841 tggccgccag cgtccgcccg gaggaacccg gcacgatgaa cccgactgct ggtgcgcgtg
      901 aaaacgacat ggtcccgaaa ctaatgctgt gcccggggct tgtcaacaca tttatttagg
      961 cgtccagacg tccacacgca tgtgccaaaa ccatggcatc cggttgcgcg gagccgcgtg
     1021 gtcggttcgg tcaatgcgca cgcgccactc cgcctttgcg gttgccgtgg cgcgaagacg
     1081 acaaatcgcg acgcaggcac tcgaccagcc gcgtcaatgc cggcacatga cggccgcgca
     1141 aggtcaccac ggccgtgcgc acgcgtgcga tgcgcgcggg gaccttgtgc accgacacgg
     1201 catcgcgccg cgcgtagatg tccagcaccg aacgcggaat caggccgacg ccgacgcccg
     1261 aggcggcggc cgtcaggatg gcgtggtaag aggcgaattc cagctcacgc gccggcacca
     1321 cgcgcaggtt ctgcagccat tgttcgaagc gccgccggta ggcgcagcca ttgccgccaa
     1381 gcaccagcaa ggtaccgccc gtcatgcgtc gcggatcgcg tacggcatcg ccggcggccg
     1441 ccaccagcac cagctcctcg acatgccacg gcacgctgac gaagcgctcg tcgtccactt
     1501 cgtcgctgac gatggccagg tccagtgcac cggcctgcaa ccgtgccagc aactcgcgcg
     1561 agtgcgcggt ctgcaattcc accgagattt ccgggtgccg ttgatggaag ccggccaatg
     1621 gccgtggcag gcgactggcc gccacgcttt ccatggtgcc gagtcgcagg cgtccgcacg
     1681 gcttgtcgcg acgcaccgcg gcgcgcgtct cgtcggccag cgacaacagg cgatcggcat
     1741 agccgaccag ggcatcgccc gccgcggtca ggcgcaggcg gcgcccctcg tgttcgaaca
     1801 gcggcacgcc gagggacgct tccagttggc ggatgcgcgc ggtgatgctg gattgcgcgc
     1861 gattgaggcg cgtcgccgcg cggttcatgc cgcccgactc gacaacggcg cggaaggtct
     1921 ccagttcacg cagttccatg atcgatattt ccgataagta acgcttgaat aattcgtttt
     1981 acccgatgta tgggcaagcc tagcatgtcc ggcctttccc gtatcgagcc ccccatgaat
     2041 agcgaacttc gcaccgccct gaccggcatg gccatcctcg ccctcgcgct cggcatcggc
     2101 cgtttcgtgt tgacgccgtt gttgccgctg atgcagaccg atgatgggct gacgctgatc
     2161 gccggcggct ggctggcgtc cacgaacatg ctcggctacc tgctcggcgc gctgttgtgc
     2221 gcgctgcgtc cgctgccgcc ccgcctgagc ctgcgcattg gcgcgatcgg ggtggccctc
     2281 gccaccctcg gcatgggcct gaccacacgc ctggatatct ggctgctatg gcggttcgcg
     2341 gccggaatcg cctcggcagc attggtggtg cacggcatcg cctggagcat ggcgcggctg
     2401 cgtgccgctg gtcgtccgct gctcgaacac gtgatgttca gcggcaccgg cgtcggcatc
     2461 gtcggcagcg gcttgctggt cgccgcggcg cgaccggcgg gcgcttcgtc ggcgggtttg
     2521 tggatcctgt tcggcatcat caccgtggtg ctgtttgcgt ggacgtggcg acgccttggc
     2581 gaagacgctg cgacggccgc aagcggcacg cccgtcccag cgcgcgcggc attgccgtcg
     2641 ggccccacct ggacgctggt ggcgatgtac gggttgctgg gtttcgccta cacgattccc
     2701 gccgcgttcc tgccgttgat cgccgagcac cagctgcact tgccggcgct gcgcgaatgg
     2761 ttctggcccc tgttcggcgt ggcgatggcg gtttccacgc tggcgctgcg ctggctgccg
     2821 gcacgcatcg acaaccgcac cgtgcttgcc gcaggcagcg tctcgctggc gggcggaatg
     2881 ctgttgagcg tggcggcgca cggcgtcgtc ccgctggtat cggccacgtt gctgatcggc
     2941 atcgccacca tgccggtggt gatgtacacg atgcgcgagg cgcgcttgct ggcgccgcgc
     3001 aaccccgttc gcctgatcgc cgcgctcacc accacgctcg gcatcggcca ggtggcgggt
     3061 ccggcgttcg cggcgtggct tgccgcacgc acgggcggct tcgacctgcc gctgatcgtg
     3121 ggtaccgcgg ccagcatggc tggcatggct tgcatgctga tacgccggtc gggcgccgat
     3181 gtcggcgtat ccacgacgcc cgcctcaggg ggcaccagtc ccgatcatcc gcgcctgtgc
     3241 gagcggcgtc tgtgatcggg tcttctcgat ggtttggacg tccatacgcc aggttgtcca
     3301 attccaaaaa caggaagccg atcacgtttt gatgcggaat ccggggtccg cgtacggcgg
     3361 ctgataaaat ggaccgatgg atacagaaac caccgttgat cgtttccccg cagagtccgt
     3421 cgttcgtctc gccgattacc gcccgcccgc ctggcgcatc acccacgtcg agctgaagtt
     3481 cgagctcggc atcgacgaaa ccctcgtcca ttcgaaactg gcgctcgcgc aggatcgcga
     3541 cgaacccctg cgcctcgacg gcgaggacgt ggcattgctg gccgcgcggc tggacggccg
     3601 tgcgcttgcg ccggccgatt acgcgatcga cgccgccggc ctcgcgatcc aaggcgcgcg
     3661 cgacggcagc gtgctggaac tcaccgtgcg catcgatcca gcccgcaaca gccagttgtg
     3721 cggcttgtat ctgtcgggca agcgcgagca cggctttctg ctgacgcagt gtgaagcgca
     3781 aggtttccgc cgcatcacgt tctttcccga tcgtcccgac gttctggcgc gctacgacgt
     3841 cacgctggtc gccgacaagg cgcgctttcc ggtgctgctg gccggcggtg aggaaaccga
     3901 atcgggcgac ctgccggacg gccgccattt cgcgcgcttc gtcgatccgc atccgaagcc
     3961 gagctacctg ttcgcgctgg tcgcggg
//
LOCUS       DASSVL010000156         2984 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1147709,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000156 DASSVL010000000
VERSION     DASSVL010000156.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2984)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2984)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2984
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1147709"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1335)
                     /locus_tag="VFM52_02635"
     CDS             complement(<1..1335)
                     /locus_tag="VFM52_02635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019238036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HET8764092.1"
                     /translation="MGFSGLFIRRPIATSLLMVAILLLGILGYRELPVSALPEIEAPS
                     LVVTTQYPGASADTMAVLVTTPLERQLGQISGLTMMSSDSSAGLSTIILQFAMNRDID
                     VAAQDVQSAINQARLPNSLPYPPVYNRVNPADAPILTLSLQSDSRPLRDVNNYADSIL
                     AQKLSQVPGVGLVSIAGNVRPAVRIQVNPAQLSNLGLTLEDVRSALTQANVNAPKGTL
                     NGKTQSYSIGTNDQLADAAQYKSTIISYKNGAPVRLSDVANVVDGVENDQLAAWAGGK
                     PAVLLDIRRQPGANIVETVKQIRQILPELRSALPADVHLSVFADRTITIRASVDDVEF
                     TLLLTIFLVVAVIFVFLRRLWATVIPSVAVPLSLLGTFGVMSFTSMSLDNLSLMALTV
                     ATGFVVDDAIVMIENIVRYIEQGKSGKEAAELGAKEIGFTVVSLTVSLIAVFL"
     gene            complement(1429..2640)
                     /locus_tag="VFM52_02640"
     CDS             complement(1429..2640)
                     /locus_tag="VFM52_02640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014506357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HET8764093.1"
                     /translation="MSRLWKIVLIVAAVIVLAIVAVRLLHKPGGAGQGGPGGKDNAPV
                     PVTVVPVARENVPVYLTALGTVQALNTIAVNPQVGGELLSLGFTEGQAVKKGQVLAQI
                     DPRTYQAAYDQAVARRAQDEALLATARSNYQRSQSPKYKQYVAQADLVTQRNTVAQNE
                     AAVAADNAAIQSAKTQLDYTKVVSPIDGLAGIRGVDPGNVVSTSSTIVTLTQLHPINV
                     MFALPEQNLDMVRAAQAKAPLEVTALDRVDAHPVATGGTLRVIDNQIDTTTGTFRLKS
                     EFPNLKGELWPGQFVNVQLKVRTDDGALVVPAQAVQRGPDGDYVYLVQADDTVKMQPV
                     VVAGEVGDSHVMIGTGLKQGDKVVTEGQFRLKPGSKVNPLKPGEVPAAPSDAELQKAK
                     QNKGGGFRGRR"
BASE COUNT          437 a         1020 c         1037 g          490 t
ORIGIN      
        1 caggaacacc gcgatcagcg agaccgtcag cgacaccacg gtgaagccga tctccttcgc
       61 gcccagctcg gccgcctcct tgccgctctt gccctgctcg atgtagcgca cgatgttctc
      121 gatcatcacg atcgcatcgt ccaccacgaa gccggtggcg acggtgagcg ccatcagcga
      181 gaggttgtcc agcgacatgc tggtgaagct catcacgccg aacgtaccga gcagcgacaa
      241 cggcacggca accgacggaa tcaccgtggc ccacagccgg cgcaggaaca cgaagatcac
      301 ggcgacgacg aggaagatcg tcagcagcag ggtgaactcg acgtcgtcga ccgaggcgcg
      361 gatggtgatc gtgcggtcgg cgaacacgct gagatgcacg tcggccggca gcgcgctgcg
      421 cagctcgggc aggatctgcc ggatctgctt caccgtctcc acgatgttcg cgcccggctg
      481 gcggcggatg tcgagcagca ccgccggctt gccgccagcc cacgcggcga gctggtcgtt
      541 ctccacgccg tcgaccacgt tggccacgtc ggacaggcgc accggcgcgc cgttcttgta
      601 gctgatgatc gtcgacttgt actgcgcggc atcggcgagc tggtcgttgg tgccgatcga
      661 gtagctctgc gtcttgccgt tcaacgtgcc cttgggcgcg ttgacgttgg cctgggtcag
      721 cgcgctgcgc acgtcctcca gcgtcagccc gaggttggaa agctgcgccg ggttgacctg
      781 gatgcgcact gccggccgca cgttgccggc aatcgacacc aggccgacac cgggcacctg
      841 cgagagcttc tgcgcgagga tcgagtcggc gtagttgttg acgtcgcgca gcgggcggct
      901 gtccgactgc agcgacagcg tgaggatcgg cgcgtcggcc gggttcaccc ggttgtacac
      961 cggcgggtac ggcagcgagt tgggcagccg cgcctggttg atcgccgact gcacgtcctg
     1021 cgcggcgacg tcgatgtcgc ggttcatcgc aaactgcaga atgatggtgg acagcccggc
     1081 ggacgaatcc gagctcatca tcgtgagccc ggagatctgc ccgagctggc gttccagcgg
     1141 cgtggtgacc agcaccgcca tggtgtcggc gctggcgccg gggtactgcg tggtcaccac
     1201 caggctcggc gcctcgatct ccggcagcgc cgacaccggc agctcgcggt agcccaggat
     1261 gccgagcagg aggatcgcca ccatcagcag cgaggtggca atcggtcggc gtatgaagag
     1321 tccggaaaat cccatgggta tccgtcttgc ggtcgggtgg cgtgcgcgcc agcgggacgc
     1381 cggcggccgt ggcagggccg gtcgccgctt ggcgaccggc gtcaggggtc agcggcgccc
     1441 gcggaaaccg cctcccttgt tctgtttggc cttctgcagc tcggcgtcgc tcggcgctgc
     1501 cggcacctcg ccgggcttga gcggattgac cttgctgccg ggcttcagcc ggaactggcc
     1561 ctcggtcacc accttgtcgc cctgcttgag cccggtgccg atcatcacgt ggctgtcgcc
     1621 aacctcgccg gccaccacca ccggctgcat cttgaccgtg tcgtcggcct gcaccaggta
     1681 cacgtagtcg ccgtccgggc cgcgctgcac cgcctgcgcg ggcaccacca gcgcgccgtc
     1741 gtcggtgcgc accttgagct gcacgttgac gaactggccc ggccacagct cgcccttcag
     1801 gttcggaaac tcggacttca ggcggaacgt gccggtggtg gtgtcgatct ggttgtcgat
     1861 caccctgagg gtgccgccgg tcgcgaccgg gtgcgcgtcg acgcggtcga gcgcggtgac
     1921 ttcgagcggc gccttggcct gcgcggcgcg caccatgtcg aggttctgct ccggcagcgc
     1981 gaacatcacg ttgatcgggt gcagctgggt cagggtgacg atggtgctgg aggtgctgac
     2041 gacgttgccc ggatcgacgc cgcggatgcc ggcgaggccg tcgatcggcg aaaccacctt
     2101 ggtgtagtcg agctgggtct tcgcgctctg gatcgccgcg ttgtcggcgg ccaccgccgc
     2161 ctcgttctgc gccacggtgt tgcgctgggt gaccaggtcg gcctgcgcca cgtactgctt
     2221 gtacttcggg ctctgcgaac gctggtagtt gctgcgcgcg gtcgccagca gcgcctcgtc
     2281 ctgcgcgcgc cgcgccaccg cctggtcgta cgccgcctgg taggtgcgcg ggtcgatctg
     2341 cgccagcacc tggcccttct tcaccgcctg gccctcggtg aagccgaggc tcagcagctc
     2401 gccgccgacc tgcgggttca ccgcgatggt gttgagcgcc tgcacggtgc cgagcgcggt
     2461 gaggtagacc ggcacgttct cgcgcgcgac cggcaccacg gtgaccggca ccggcgcgtt
     2521 gtccttgccg ccgggcccac cctggccggc gccgcccggc ttgtgcagca accgtacggc
     2581 gacgatcgcg agcacgatca ccgccgccac gatcagcacg attttccaga gacgcgacat
     2641 gcagaaactc ctggtcagaa cgggggaccc gcggcacgtg cggcgcgcga cctgctgcga
     2701 caaccatggc ggcagccggt tcgcgaaaac ctgcggccac ggctgattcg ggtgccaagc
     2761 ataggggcac tcgaacgccg gcggacaatg ccagttgaca caggcggggc atgaccgacg
     2821 gcaggggtgg acatgcgata cggcgtcgcc gcgcgcgctc cgcccccgaa aaattgcgcc
     2881 gggcttgtcc tatactccgc accttgcgcc tgcggggcgc gtgccctgcg acgcacccgt
     2941 cgctggcgcg tgcacgcggc cgcgcaatgc ggcgccggct actg
//
LOCUS       DASSVL010000157         3382 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1048916,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000157 DASSVL010000000
VERSION     DASSVL010000157.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3382)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3382)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3382
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1048916"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..450
                     /locus_tag="VFM52_02645"
     CDS             <1..450
                     /locus_tag="VFM52_02645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007804122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HET8764094.1"
                     /translation="RNSNSRKSARREREPWILIASPALPLSMRQVVTLYARRMQIELS
                     FRDLKSHRYGQGFEDSLTRKGARIEVLLLLSTLAAFATWLVGVACEASGIDTWLTPYR
                     SRRRLYSVMRLGREALVRRWLPISASHLLDHLRRPPASLLDQVGVPG"
     gene            complement(978..2480)
                     /locus_tag="VFM52_02650"
     CDS             complement(978..2480)
                     /locus_tag="VFM52_02650"
                     /inference="COORDINATES: protein motif:HMM:NF012931.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-N-acetylhexosaminidase"
                     /protein_id="HET8764095.1"
                     /translation="MKVRVLLAIALAAVLAGCVRPSIRAPAPRAAIIPAPQSLALAAG
                     NLHLTGAVNVTTDAGAPNARRALDAALSGVGLATSAPAAPRLQLRLVNDSALGDEGYR
                     LTIDDGITLAARTDAGLFYAVETLRQLLPAPPVAAGTAITLPHLAITDTPAYRWRGSS
                     LDVARSFLPISYLKAHIDRMAFFKLNRLHLHLTDDQGWRIEIKRYPRLTEVGGASAVK
                     GGRPGFYTQAELKDLVAYAAARNVTIVPEIDLPSHIQAAISAYPELACNDVTNLGPYD
                     GLDVGFNILCQQKPEVIYPFVRNVLTEVAAIFPSEYLHIGGDEIKNPLYPDFVARTAG
                     IVNDLGRKAIVWEEGSVADTRPDTLLQLWNDKYDTAPATAKGHQWILSPCSYFYLDHG
                     NYPDQPNTQTWCRNGVPLDRVYSFDPRTYPPAAGVEGDLWSEFVHTDAATDNRLWPRL
                     AAVAEVAWRNPAAPKDYPGFLRRLRALRPQFDAMHIQYYDGAEVWGNAAK"
     gene            2890..>3382
                     /locus_tag="VFM52_02655"
     CDS             2890..>3382
                     /locus_tag="VFM52_02655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8764096.1"
                     /translation="MPSTSCHPDAPHEKLKAPDWYVSALMMDRALDAILRRVKKLDRA
                     HDVPYLAGYSKDGKTIYIDRHLPTSFTFRGRTIEVDRFLILHEEVEKTLIDQLGLHYL
                     HAHQIATRAEEAAVNAARVTWQAYDRFMQKYVKAIGDERLQKVPADLDLKPYRDYHDY
                     DLLQ"
BASE COUNT          545 a         1046 c         1222 g          569 t
ORIGIN      
        1 cgcaactcca acagtcgcaa gagcgcccgg cgcgagcgcg aaccttggat actcatcgcc
       61 tcaccagcgc ttcctctgag catgcggcaa gtcgtgacgc tctacgcgcg gcgcatgcaa
      121 attgagctgt cctttcgcga cctgaaatcc caccgctacg gtcaaggctt cgaagacagc
      181 ctgacccgca agggcgcgcg catcgaggta cttttgctgc tgagtaccct ggccgcgttt
      241 gccacctggt tggtgggcgt ggcatgcgaa gccagtggca tcgacacctg gttgacgccc
      301 tatcgcagca ggcgccgctt gtactcggtg atgcggctgg gtcgcgaagc actggtgcga
      361 cgatggctgc cgatctcggc ttcgcatctt ctcgatcacc tgcgacgacc gcccgcatcg
      421 ctgctcgatc aagtgggtgt gcccgggtga aaacgtgggg aaacctcagg gtcaggttca
      481 cttaccgcag caataagggg acggaggtaa ttaatctttc agtgtgacgg gggcgtttaa
      541 ctatccccgt ccccttatca cccaggaact gcgccgcgcc ggcctccggt agaggggttg
      601 gccctgctgc ctatgcttga cgagagcgtc cgagccttag cggaaggcag cgacccgacc
      661 cgcgcaggtc tagcctctcc ctcgcgtgcc ggctatgttt gacgtggctt gctgcacggc
      721 ggcatgcggg gcgcttgccg ttggttggcg cgtagcaggg ggcaaggcga atggggaatt
      781 cgatggaagg tcgcgggcag aggtcgggca attccgtcgc ccagatcatc gtggccagca
      841 tggcgggcac gacgatcgag tttttcgatt tctacatcta aaatataaaa taacggggtc
      901 aggttcactt acctcggatc gcgacaagag ggaaccccga gcgggtgatc ggtcgaagca
      961 tcgttccacg cccccattca cttggcagcg ttcccccaca cctccgcccc gtcgtaatac
     1021 tggatgtgca tggcatcgaa ctgcgggcgc agggcgcgca ggcgacgcag gaagccgggg
     1081 tagtccttgg gcgcggcggg attgcgccag gcgacttcgg cgaccgcggc gaggcgcggc
     1141 cagaggcggt tgtcggtggc ggcgtcggtg tgcacgaatt cggaccacag gtcgccttcc
     1201 acgccggcgg caggcggata ggtgcgcggg tcgaagctgt acacgcggtc gagcggcacg
     1261 ccgttgcggc accaggtctg ggtgttcggc tggtcgggat agttgccgtg gtcgaggtag
     1321 aagtagctgc acggcgagag gatccactgg tggcctttcg cggtggccgg cgcggtgtcg
     1381 tacttgtcgt tccacagttg cagcagggtg tcgggccggg tgtcggccac cgagccttcc
     1441 tcccatacga tggccttgcg gccgaggtcg ttgacgatgc cggcggtgcg cgcgacgaag
     1501 tcggggtaca gcgggttctt gatctcgtcg ccgccgatgt gcaggtactc ggacgggaaa
     1561 atcgccgcga cttcggtgag cacgttgcgt acgaacgggt agatcacctc gggcttctgc
     1621 tggcacagga tgttgaagcc gacgtcgagg ccgtcgtacg ggccgaggtt ggtcacgtcg
     1681 ttgcaggcca gctccgggta ggccgagatc gccgcctgga tgtggctggg caggtcgatc
     1741 tccgggacga tggtgacgtt gcgtgccgcg gcgtaggcca ccaggtcttt cagttccgcc
     1801 tgggtgtaga agccggggcg cccgcccttc accgcgctgg cgccgccgac ctcggtcagc
     1861 cgcgggtagc gcttgatctc gatgcgccag ccctggtcgt cggtgaggtg caggtgcagg
     1921 cggttcaact tgaagaacgc catgcggtcg atgtgcgcct tgaggtagct gatgggcagg
     1981 aagctgcgcg cgacgtcgag tgaactgccg cgccagcggt aggccggggt gtcggtgatg
     2041 gcgagatgcg gcagggtaat ggcggtgccg gcggcgaccg gcggcgcggg cagcagctgg
     2101 cgcagggttt ccaccgcgta gaacaggccg gcgtcggtgc gcgctgcgag cgtgatgccg
     2161 tcgtcgatgg tgaggcggta gccttcgtcg ccgagcgcgg agtcgttcac caggcgcagt
     2221 tgcagccggg gtgctgccgg cgcgctggtg gccaggccga ctccgctgag cgccgcgtcc
     2281 agtgcgcgtc gtgcgttcgg ggcgccggca tcggtggtga cgttgaccgc cccggtgagg
     2341 tgcaggttgc ccgccgccaa ggccagcgat tgcggcgccg ggatgatcgc cgcgcggggg
     2401 gccggcgcgc ggatggacgg ccgtacgcag ccggccagca cggcggccaa cgcgatggcg
     2461 agcaagaccc tgactttcat gcggttcccc tgtggtggcg cgagtgcacc gccgagcatt
     2521 gcgcgcgggc aggccgaggg caagccgtcc ggggagcagg cgcgcgggcg cggtggggcg
     2581 cacgagccac cgatccgcat ggcgcgctcc gcggccacgg ccggagggta ggctccccac
     2641 gccatgcgcc gaccgccgcg aggggcgccg gacccgcgcg atgaagccct gcgcgcggcc
     2701 agtgcgacgg aggtggacaa actggcggcg ctgatcgggc gggatctcgc ccactggaag
     2761 tggcggcttc gcgctgcggt cgcgccccgc gggaggcgat ccgtgttgca cggtgcgctt
     2821 ccagaggatg atttttgccg cgcaggcgcc tagcctcgat acgtcttcca tcctgcgcgg
     2881 aggtgcccca tgccgtcgac cagctgccat cccgatgccc cgcacgaaaa actgaaggcg
     2941 cccgactggt acgtctcggc gctgatgatg gatcgcgcac tggacgcgat cctgcgccgg
     3001 gtgaaaaagc tggaccgcgc gcacgacgtg ccgtatctcg ccggctacag caaggacggc
     3061 aagacgatct acatcgaccg ccacctgccg accagcttca cgttccgcgg gcgcacgatc
     3121 gaggtggacc ggttcctgat cctgcacgag gaagtggaga agacgctgat cgaccagctc
     3181 ggcctgcatt acctgcacgc gcaccagatc gcgacgcgag cggaagaggc cgcggtgaac
     3241 gcggcgcgag tcacctggca ggcgtacgac cgcttcatgc agaaatacgt gaaggcgatc
     3301 ggcgacgagc gcctgcagaa ggtgccggcc gacctcgacc tcaagccgta tcgcgattac
     3361 cacgactacg acctgctgca gc
//
LOCUS       DASSVL010000158         3216 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_780643, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000158 DASSVL010000000
VERSION     DASSVL010000158.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3216)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3216)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3216
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_780643"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..826
                     /locus_tag="VFM52_02660"
     CDS             <1..826
                     /locus_tag="VFM52_02660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005412544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="alpha-amylase family glycosyl hydrolase"
                     /protein_id="HET8764097.1"
                     /translation="GSVTLGEISSEDSLATMAQYTAGHRLHMGYSFELLTDTFSAAYI
                     RDTVRAQEAQMTEGWPCWAISNHDVERVLSRWGNGQASAVLANQLTALVCSLRGSVCV
                     YQGEELGLTEAELPFEALRDPYGIAFWPEFKGRDGCRTPMPWTDGPNAGFSPAQPWLP
                     VPPEHRDLNVARQAADAHSALAGYRRFLHWRRRVPALRLGAIRFLDSAEPVLAFEREL
                     RGERVLAVFNLSAQPAELAVPAGSWSVLDGHGLVSGTLAGSRLQLPPHASWFARAV"
     gene            complement(836..1828)
                     /locus_tag="VFM52_02665"
     CDS             complement(836..1828)
                     /locus_tag="VFM52_02665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015449079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pteridine-dependent deoxygenase"
                     /protein_id="HET8764098.1"
                     /translation="MIEAGENPGPAKAPAPAPQVCYRTDPAAALLAEPGTLAVFGFGR
                     DAGAADDPRWLRVPLETLDGAAPREVWHVAAPVQHGRDGAVRWAQGGGWLFATLELDE
                     REHGGPAGAAHTAYATLHAFMRRHADHRVLSIWNYQGAINDGAGDAERYRQFCDGRAA
                     GSGDFFAAGYPAATAIGHHADRHLLQVYLLAGRAAGTAIENPRQVSAWRYPREYGRTA
                     PGFARAMLLPAHDALAISGTAAVVGHASAHAGDVAAQLDEILVNLEALLAEAGLPPDF
                     DTLAPLKAYLRHPVDAPRIRAVLDARLPGVPVLLLHGDVCRRELLVELDGWRYA"
     gene            1914..2186
                     /locus_tag="VFM52_02670"
     CDS             1914..2186
                     /locus_tag="VFM52_02670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007082529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopantetheine-binding protein"
                     /protein_id="HET8764099.1"
                     /translation="MTQLTDAQRELATLIVDSLHLEDVDPATIDPDAPLFGGDLGLDS
                     IDALEIALAVSQHYGFQLRSDHPDNRRIFATLRELAAHVEAHRAAA"
     gene            2201..3154
                     /locus_tag="VFM52_02675"
     CDS             2201..3154
                     /locus_tag="VFM52_02675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007082527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase"
                     /protein_id="HET8764100.1"
                     /translation="MSDATRWREQPEGGGWFALWLIRALALHGGRRFGRMLLYPITLY
                     FFLRRGAERRASRDYLTRVLGHPPRVLQMLRQFHAYAATTLDRIFLLAHGERGFDIRI
                     DGLAALERCIDEGRGVLLVGSHQGSFEALRVVHARRPDLALRVVLDKAKTPAMTSLLE
                     ALAPDVGAAVIDAGQGGAGIVLAAAETCARGGIVALLGDRAGEHEAQRAVPLLGAPAL
                     LPVGPWRLAAALKVPVLLCFGVYLGGNRYRLVFEPFADTVVLPRAGSGAVLDALLARY
                     AARLEHHARRAPYNWFNFHEFWAQPASAAPNTHGAQPCERR"
BASE COUNT          410 a         1125 c         1197 g          484 t
ORIGIN      
        1 cggcagcgtc acgctgggcg agatctcctc cgaggattcg ctcgcgacga tggcgcagta
       61 caccgccggc caccgcctgc acatgggcta cagcttcgaa ctgctgaccg acaccttcag
      121 cgccgcgtac atccgcgata ccgtgcgcgc gcaggaagcg cagatgaccg agggctggcc
      181 gtgctgggcg atttccaacc acgacgtgga gcgcgtgctg agccgctggg gcaacggcca
      241 ggcctcggcg gtgctggcca accagctcac cgcactggtg tgctcgctgc gcggctcggt
      301 gtgcgtgtac cagggcgagg agctgggcct gaccgaggcc gagctgccgt tcgaggcgct
      361 gcgtgatccc tatggcatcg cgttctggcc ggagttcaag gggcgcgacg gctgccgcac
      421 gccgatgccg tggaccgatg gcccgaacgc tggcttcagc ccggcgcaac cgtggttgcc
      481 ggtgccgccc gagcaccgcg atttgaacgt ggcgcgccag gccgccgacg cgcattccgc
      541 gctggccggc taccgccgct tcctgcactg gcggcgccgc gtgccggcgc tgcgcctggg
      601 cgcgatccgt tttctggaca gcgccgaacc ggtactggcg ttcgagcgcg agctgcgggg
      661 cgagcgcgtg ctggcggtgt tcaatctttc cgcgcagccg gcggaactgg ccgtgccggc
      721 cgggtcatgg tcggtgctcg acggccatgg cctggtgtcc ggcacgctgg ccggctcgcg
      781 cctgcagttg ccgccgcacg cgagctggtt tgcgcgcgcg gtgtgaacgg ctggctcagg
      841 cgtagcgcca gccgtccagt tccaccagca gctcgcggcg gcagacgtcg ccgtgcagca
      901 gcagcaccgg cacaccgggc aggcgggcgt cgaggaccgc gcggatgcgc ggggcatcca
      961 cggggtggcg caggtacgcc ttgagcggcg cgagcgtgtc gaagtcgggc ggcaggccgg
     1021 cttcggcgag caaggcttcg aggttgacga ggatctcgtc cagttgcgcg gcgacgtcgc
     1081 cggcatgcgc cgaggcatgg ccgacgacgg cggcggtgcc ggagatcgcc agcgcgtcgt
     1141 gcgccggcag cagcatggcg cgcgcaaagc ccggtgcggt gcgcccgtat tcgcgcgggt
     1201 agcgccaggc gctgacctgg cgcgggttct cgatcgcggt gccggcggcg cggccagcca
     1261 gcagatagac ctgcagcaga tggcggtcgg cgtggtggcc gatcgcggtc gccgccgggt
     1321 agccggcggc aaagaaatcg ccgctgccgg cggcgcggcc gtcgcagaac tggcgatagc
     1381 gctcggcgtc gcccgcgccg tcgttgatcg cgccctggta gttccagatg ctcagcacgc
     1441 ggtggtcggc gtggcggcgc atgaacgcat gcaacgtcgc gtacgcggtg tgcgcggcgc
     1501 cggccgggcc gccgtgctcg cgctcgtcca gttccagcgt ggcaaacagc cagccgccgc
     1561 cctgcgccca gcgcacggcg ccgtcgcggc cgtgctgcac cggcgctgcc acatgccaca
     1621 cctcgcgcgg ggcggcgcca tccagggttt ccagcggcac ccgcagccag cgcgggtcgt
     1681 ccgcggcgcc ggcatcgcgg ccgaagccga acaccgcgag ggtgccgggt tcggcgagca
     1741 gggcggcagc ggggtcggtg cgatagcaaa cctgcggggc gggcgccggc gccttggccg
     1801 ggcccgggtt ttcgccagct tcgatcatgc ggagaaccgg gtgggacatc cgcccatgtt
     1861 acacttgccg gccaagttgc cggttttcat ggcgtttttc ggattccccc tgcatgacgc
     1921 aattgactga cgcccagcgc gagctggcca ccctgatcgt cgacagtctg catctcgagg
     1981 acgtcgaccc ggcaacgatc gatccggatg cgccgctgtt cggcggcgac ctggggctgg
     2041 attcgatcga cgcgctggaa atcgcgctgg cggtctccca gcactacggt ttccagttgc
     2101 gctccgacca tcccgacaac cggcgcatct tcgccaccct gcgcgagctg gcggcgcacg
     2161 tcgaagcgca ccgcgcggcg gcctgactgg aacatcggcg atgagcgacg ccacccgctg
     2221 gcgcgagcag ccggaaggcg gcggctggtt cgcgctgtgg ctgatccgcg cgctggcgct
     2281 gcatgggggc cgccgcttcg ggcgcatgct gctgtatccg atcacgctgt atttcttctt
     2341 gcgccgcggc gccgagcggc gcgcctcgcg tgactacctg acccgcgtgc tcggccatcc
     2401 gccgcgcgtg ctgcagatgc tgcgccagtt ccacgcctac gccgccacca cgctcgaccg
     2461 catcttcctg ctggcgcacg gcgagcgcgg gttcgatatc cgcatcgacg gcctcgccgc
     2521 gctggaacgc tgcatcgacg aaggccgcgg cgtattgctg gtcggttccc accagggcag
     2581 cttcgaggcg ttgcgcgtgg tgcatgcgcg gcgcccggac ctggccttgc gcgtggtgct
     2641 ggacaaggcc aagacgccgg cgatgacctc gctgctcgaa gcgctggcgc cggacgtcgg
     2701 cgccgcggtg atcgacgccg gtcagggcgg cgccggcatc gtgctggccg cggccgagac
     2761 ctgcgcgcgc ggcggcatcg tcgccctgct cggcgatcgc gccggcgagc acgaggcgca
     2821 gcgcgcggtg cccctgctcg gcgcgcccgc actgctgccg gtcggcccgt ggcggctcgc
     2881 cgccgcgctc aaggtgccgg tgctgctgtg cttcggcgtg tatctcggcg gcaaccgcta
     2941 tcggctggtg ttcgagccgt ttgccgacac cgtggtgctg ccgcgcgccg gaagcggggc
     3001 ggtgctggat gccttgctgg cgcgctacgc ggcgcggctc gaacaccatg cgcggcgggc
     3061 gccctacaac tggttcaact tccacgagtt ctgggcgcag ccggcatccg ccgcgccgaa
     3121 cacgcacggc gcgcagccgt gcgagcggcg gtagctgcgc acgacgtcgc ggtaatgcag
     3181 cacccgcgcg atggtgtaca gcgtgatgcg ggtgat
//
LOCUS       DASSVL010000159         2871 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1302808,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000159 DASSVL010000000
VERSION     DASSVL010000159.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2871)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2871)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2871
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1302808"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1640
                     /locus_tag="VFM52_02680"
     CDS             <1..1640
                     /locus_tag="VFM52_02680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007081898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="MASE1 domain-containing protein"
                     /protein_id="HET8764101.1"
                     /translation="PAPCTIGRMRLKTLHLMQSGPLLGVAYFLLWLLLWPTAEPYWML
                     PYGVRFGALLLLPMRRWGWVIAAELAAAAVMDLHQGMSMGWRGYLLGTLPEPLATAAG
                     LWLLRRLNPHAVANLHSPQETARLLLAAALVVLATTTVDMGLMTSIHAGVAASAVRQV
                     LGYELLGGYLGVLLVVPVMVLLLRSPPDRNELAAVALDGLLVMLPALAILLALSAHLA
                     PHPQFVRALSLAPVLFFAFRHGWRGASLAMAVSGFGTALLDQRFDQVPSAASYLFLAV
                     AGSGILMLGSATDALRRSKRRVAEQNAHLAAANRRLDQLARQLRTAARGNLQADEAQR
                     RHLAAELHDELGQNITAIQTHVKLAQARLQQAGLEDIGTSINGILAHMRRALHRLLDD
                     LRPAVLDEFGLLRALDEGPIRDLFNAAGIRYRTELHGDPRLLDDDIRTTIYRLAQESA
                     TNTVKHAGASEFSVRLRIGERGGSVLALLDLRDDGVGLPDAMTGPSADGGRGLQGMRN
                     RVTSLGGVFRLRPGTRGVHLHVLLRCVTDSTGKPSSA"
     gene            complement(1907..2329)
                     /gene="fur"
                     /locus_tag="VFM52_02685"
     CDS             complement(1907..2329)
                     /gene="fur"
                     /locus_tag="VFM52_02685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007508235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferric iron uptake transcriptional regulator"
                     /protein_id="HET8764102.1"
                     /translation="MEQETKELRRVGLKVTHPRMRILQIFDEESGSHLSAEDIYKRLL
                     ADQEDIGLATVYRVLTQFEAAGILIKHNFEGGQAVYELDRGQHHDHMVDIDSGKVIEF
                     VSEEIERLQHEIAARHGYVIEDHSLVLYVRPKVRARKA"
     gene            2408..>2871
                     /locus_tag="VFM52_02690"
     CDS             2408..>2871
                     /locus_tag="VFM52_02690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007805393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamE"
                     /protein_id="HET8764103.1"
                     /translation="MHKLLSLPVVAALALVVSGCHLVYTPDVRQGNLFDKTIDQKAVD
                     QLKPGLTKRQVLVLLGTPSVTSPFNQSRWDYVSTYSHRGGKMTVSTMSLYFNDDTLAR
                     IEGDPFIESNKNLLKESKKYHVDYPVNESGGDKDIKGKDDQGSGSDSGSSGG"
BASE COUNT          444 a          986 c          939 g          502 t
ORIGIN      
        1 cgccggcgcc gtgtaccatc ggccggatgc gcctcaagac cctccacctg atgcaatccg
       61 ggcccctgct cggcgtcgcg tatttcctgc tgtggctgct gctgtggcct accgccgagc
      121 cgtactggat gctgccctac ggcgtgcgct tcggtgcctt gctgctgctg ccgatgcgcc
      181 gttggggctg ggtgatcgcc gcagagcttg cggccgccgc ggtgatggac ctgcaccaag
      241 gcatgtcgat gggttggcgc gggtatctgc tgggcacgtt gcccgaaccg ctcgccaccg
      301 ccgccggcct gtggctgctg cgccgcctga acccgcatgc ggtggccaac ctgcacagcc
      361 cgcaggaaac cgcccgcctg ctgctggccg ccgcgctggt cgtattggcc acgaccacgg
      421 tcgacatggg gttgatgacc agcatccacg ccggcgtcgc cgccagcgcc gtgcgtcagg
      481 tgctgggcta cgagctgctc ggcggctacc ttggcgtcct gctcgtggtg ccggtcatgg
      541 tcctgctgct gcgctcgccg cccgatcgca acgagttggc ggcggtggcc ctcgacgggc
      601 tgctggtgat gctgccggcc ctcgccatcc tgctggcgtt gtccgcccac ctggcgccgc
      661 acccgcagtt cgtgcgcgcg ctgtcgctcg caccggtgct gttctttgcg ttccgccacg
      721 gctggcgtgg cgccagcctg gcgatggccg tctcgggatt cggcaccgcg ctgctcgacc
      781 agcgtttcga ccaggtgccg tcggccgcca gctacctgtt cctcgcggtc gccggcagcg
      841 gcatcctgat gctgggctcg gccactgatg cattgcggcg cagcaagcgg cgggtcgccg
      901 agcagaacgc ccacctcgcc gccgccaacc ggcgcctcga ccagctggcc cgccagttgc
      961 gcacggcggc gcgcggcaac ctgcaggccg acgaggcgca acgccggcat ctcgccgccg
     1021 agctgcacga cgaactggga caaaacatca ccgcgatcca gacccacgtg aaactcgcgc
     1081 aggcccggct gcagcaggcc gggctggagg acatcggcac ctcgatcaac ggcatcctcg
     1141 cgcacatgcg gcgcgccttg catcgcctgc tggacgacct gcgcccggcc gtgctcgacg
     1201 aattcggcct gctgcgcgcg ctcgacgaag ggccgatccg cgacctattc aacgccgccg
     1261 gcatccgcta ccgcaccgag ctgcatggcg acccgcgcct gctcgacgac gacatccgca
     1321 ccacgatcta ccggctcgcc caggaaagcg cgaccaatac ggtgaagcac gccggcgcca
     1381 gcgaattcag cgtgcgcctg cgcatcggcg aacgcggcgg cagcgtgctc gcactgctcg
     1441 acctgcgcga cgacggcgtc ggcttgccgg acgcgatgac cggcccttcg gcggatggtg
     1501 gacgcgggct gcaaggcatg cgcaaccggg tcacctcgct gggcggcgtg ttccggctgc
     1561 gccccggcac acgcggcgtt cacctgcatg tgttgctgcg ctgcgtcacg gattccaccg
     1621 gcaaaccctc gtcggcatag gaatttttcc gatacacaga gcgtaaaggc ttcgttacga
     1681 tccggtcatc gatgtggggg agccgccatc gcaagatggc gtaccggggt cctcgtgggg
     1741 acggtgactc cggaaggatg acaaggatgc cgtcttgtcg ttgcctggga tgtaccggtt
     1801 cgtcgcgagc aattcgccgc accgggcacc agtcaggcaa cgaaacgatc gcgaggtgga
     1861 caggagtcct tcctcgcgat ttttttgtcc cgggtttcgc tgtgtctcaa gccttgcggg
     1921 cgcgcacctt ggggcgcacg tagagcacca ggctgtgatc ctcgatcacg tagccgtggc
     1981 gcgccgcgat ctcgtgctgc aggcgctcga tctcctcgct gacgaactcg atgaccttgc
     2041 cgctgtcgat atccaccatg tggtcatggt gctggccgcg atcgagctcg tagacggctt
     2101 gcccgccctc gaagttgtgc ttgatgagga tgccggccgc ctcgaactgg gtcagcacgc
     2161 ggtaaacggt ggccaggccg atgtcttcct ggtcggccag caggcgtttg tagatgtctt
     2221 cggccgagag gtggctgccc gactcctcgt cgaagatctg caggatgcgc atgcgcggat
     2281 gggtcacctt gaggccgacc ctgcgcaact ccttggtttc ctgttccatc gttgcacctc
     2341 ccgtcggcgt ggcgctgcca agccgtagtg tatcatccga caccttcacg atctggacgt
     2401 gacacgcatg cacaagctgt tatccctgcc ggtcgtcgcc gcgctggcgc tggtcgtgtc
     2461 cggctgccat ctggtctaca cgccggacgt gcgccagggc aacctgttcg acaagacgat
     2521 cgaccaaaag gcggtggatc agctcaagcc cgggctgacc aagcgccagg tgctggtgct
     2581 gctgggcacg ccgtcggtca cctcgccgtt caaccagagc cgctgggatt acgtgtccac
     2641 gtattcgcac cgcggcggca agatgacggt gagcacgatg agcctgtact tcaacgacga
     2701 cacgctcgcg cgcatcgaag gcgacccgtt catcgaaagc aacaagaacc tgctcaagga
     2761 gagcaagaag taccacgtcg actatccggt caacgaatcc ggaggcgaca aggacatcaa
     2821 gggcaaggac gatcagggtt ccggcagcga ctccggcagc agcggcggcg a
//
LOCUS       DASSVL010000160         3007 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_17643, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000160 DASSVL010000000
VERSION     DASSVL010000160.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3007)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3007)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3007
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_17643"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1462
                     /locus_tag="VFM52_02695"
     CDS             <1..1462
                     /locus_tag="VFM52_02695"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HET8764104.1"
                     /translation="SPYTLARYPAGYLPMNHFSVLDTTSVLGLRGVLADWDYDLSATV
                     GGNHVKRHTSNTFNEALGAASPTTFPGGTTIARQSEGNLDVSRDFDAPWNRPLTVAWG
                     LDWRYTSYTVKSGQGAQFGGSGAGLGAGVEHHGRHNEAGYVDLETGFSDRFSAGLAVR
                     HEHYGDFGNTTAWKLSGRYALNDAVALRATGSTGFRAPSLPQEFYSSTSIEFLNDGTG
                     GTQPYLVGTFRTDDPVAQALGAQPLKPETSRNLSVGLVLTPASGPYTTLDVYQIAIRN
                     RILLSGDLVGPAVVSYLTSAGFPNVTGGRFFTNAANTRTRGADLVSTWPITLGHATLK
                     LTLGGSWNRTRITRVAANPPQLGLAGLVLPVLNRSERGLITAATPHTKGFAGVDWSLG
                     AWSFLARVTRYGSFETWNTNPATDQTFARRYLLDLAASWHHGPWTATLGGNNVTNAYP
                     QQNSAANNFAGNITYPFTAPFGFSGVYWHADVAYRW"
     gene            complement(1500..2123)
                     /locus_tag="VFM52_02700"
     CDS             complement(1500..2123)
                     /locus_tag="VFM52_02700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007509697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="trimeric intracellular cation channel family
                     protein"
                     /protein_id="HET8764105.1"
                     /translation="MNEHLLFNFVDLAGTFAFAISGATAARRCHLDLFGVLALAYITA
                     CGGGIARDVCIGAIPPAGLSDWRYLATSVIAALATMGAYHQIERLTYPVRLFDAMGLG
                     LFAVYGAHKALLHGANAEVAILLGMVTAIGGGLARDMLLARVSVVLQKEIYASAAALG
                     AALAVIGEYARWPALWATWLPIVLCFALRFVSLRCGWNLPRFGRGER"
     gene            complement(2218..2544)
                     /locus_tag="VFM52_02705"
     CDS             complement(2218..2544)
                     /locus_tag="VFM52_02705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007509698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8764106.1"
                     /translation="MNFGILIPISLFVCITYAIKVCVDAVTRRRMLEAGGSAELVNSV
                     LRDEELRRRHSSLRWGFVLLSVALGFGLIQWFGWQDVTPGLVAVLAGATGLGNLVFFA
                     ISRRLG"
     gene            2664..>3007
                     /locus_tag="VFM52_02710"
     CDS             2664..>3007
                     /locus_tag="VFM52_02710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007509699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HET8764107.1"
                     /translation="MDDTHASDRALVAAVLARRPGAFEHLVREHQGLCWHIIQRMVRN
                     PEDTRELCQDTFLRVHQCLQQYRGESALKSWIGRVAYHIALRHLERKRIPLAGAHDDE
                     GFPLTEVVADDF"
BASE COUNT          506 a         1143 c          970 g          388 t
ORIGIN      
        1 ctcaccgtac acgctggcgc gctatccggc gggctacctg ccgatgaacc atttcagcgt
       61 gctggacacc accagcgtgc tcggcctgcg cggcgtcctc gccgactggg attacgacct
      121 ttccgccacc gtgggcggca accacgtgaa gcgccacacc tcgaacacgt tcaacgaggc
      181 gctgggtgcg gcctcgccca ccacgttccc cggcggcacc acgatcgccc ggcaaagcga
      241 gggcaacctc gacgtgtcgc gcgacttcga cgcgccgtgg aaccgcccgc tcaccgtcgc
      301 gtggggcctc gactggcgct acacgagcta cacggtcaag agcggccagg gcgcgcaatt
      361 cggcggcagc ggcgccgggc tcggtgccgg cgtcgagcat cacggccgcc acaacgaggc
      421 gggctacgtc gacctggaaa ccggcttcag cgaccgcttc tccgccggcc tcgccgtgcg
      481 ccacgagcac tacggcgatt tcggcaacac caccgcgtgg aagctttccg gccgctacgc
      541 gctgaacgac gccgtggcac tgcgcgcgac cggctccacc ggcttccgcg cgccgtcgct
      601 gccgcaggag ttctactcaa gcacgtccat cgagttcctc aacgacggca ccggcggcac
      661 ccagccgtat ctcgtcggca ccttccgcac cgacgacccg gtggcgcagg cgctcggcgc
      721 gcagccgctc aaacccgaga cctcgcgcaa cctcagcgtc ggcctcgtgc tcaccccggc
      781 gagcggcccg tacaccacgc tcgacgtcta ccagatcgcg atccgcaacc gcatcctgct
      841 gagcggcgac ctggtcggcc cggccgtcgt gtcctacctc acctcggccg gctttcccaa
      901 cgtcaccggc gggcgcttct tcaccaatgc cgcgaacacg cgcacgcgcg gcgcggatct
      961 cgtcagcacc tggccgatca cgctcgggca cgccaccctc aagctcacgc tcggcggcag
     1021 ctggaaccgg acgcgcatca cccgcgtggc ggcaaacccg ccgcagctcg gcctggccgg
     1081 gctcgtgctg ccggtgctca accgcagcga gcgcggcctg atcaccgccg ccacgccgca
     1141 caccaagggc ttcgccggcg tcgactggtc gctgggcgcg tggagcttcc ttgcccgcgt
     1201 cacccgctac ggcagcttcg agacctggaa caccaacccg gccaccgacc agaccttcgc
     1261 ccgccgctac ctgctcgacc ttgccgcgtc gtggcaccac ggcccgtgga cggccacgct
     1321 cggcggcaac aacgtcacca acgcctaccc gcagcaaaac agcgcggcca acaatttcgc
     1381 cggcaacatc acctacccgt tcaccgcgcc gttcgggttc agcggcgtgt actggcacgc
     1441 cgacgtcgcg tatcgctggt gacgaatgcg cgacggccga ggcaacccgg ccgccgcgtt
     1501 caccgctcgc cgcgaccgaa gcgcggcagg ttccagccgc agcgcagcga cacgaaacgc
     1561 agcgcgaagc acagcacgat gggcagccac gtggcccaca gcgcgggcca gcgcgcgtat
     1621 tcgccgatga cggccagcgc ggcgccgagc gcggcggcgc tggcgtagat ctccttctgc
     1681 agcaccaccg acacgcgcgc cagcagcatg tcgcgcgcca gcccgccgcc gatcgcggtg
     1741 accatgccga gcaggatcgc gacctccgca ttcgcgccgt gcagcagcgc cttgtgcgcg
     1801 ccgtacaccg cgaacaggcc caggcccatc gcgtcgaaca ggcgcaccgg gtaggtcagg
     1861 cgctcgatct ggtggtaggc gcccatcgtc gccagcgcgg caatcaccga ggtcgcgagg
     1921 tagcgccagt cggacaaccc cgccggcggg atcgcgccga tgcacacgtc gcgtgcgatg
     1981 ccgccgccgc aggcggtgat gtacgccagc gcgaggacgc cgaacaggtc gagatggcag
     2041 cgccgtgcgg cggtcgcgcc gctgatcgcg aaggcaaagg tgccggcaag gtcgacaaag
     2101 ttgaacagca ggtgttcgtt catgcagccg gttcgggcgg acatgccggc agcgcggcgg
     2161 tgcccgccat tgaaccagct ttgccacccg gcgacgatcg ccaggcgaca cgccggctca
     2221 gcccagccgg cgcgagatcg cgaagaacac caggttgccc aggccggtgg caccggccag
     2281 cacggcgacc aggccggggg tgacgtcctg ccagccgaac cactggatca ggccgaagcc
     2341 cagcgccacc gacagcagca cgaagcccca gcgcagcgag gaatgccggc ggcgcagctc
     2401 ctcgtcgcgc agcaccgagt tgaccagctc ggcggagccg cccgcctcca gcatgcgccg
     2461 gcgcgtcacc gcatcgacgc agaccttgat ggcgtaggtg atgcagacaa acagcgagat
     2521 cggaatcagg atgccgaagt tcatgggttc ctcctggtcg ggaaaggtga tggcgggttt
     2581 cgcggacatg gatacggccc ggcggccaac ggttgcggcc gcccgattgc aaccgtcgcg
     2641 cgcctgcgcg tatctcatcc gccatggatg acacccatgc ctccgaccgc gccctggtcg
     2701 ccgccgtgct ggcccggcgg ccgggcgcgt tcgaacacct cgtgcgcgag caccaggggc
     2761 tgtgctggca catcatccag cgcatggtgc gcaacccgga ggacacccgc gagctgtgcc
     2821 aggacacctt cctgcgcgtg caccagtgcc tgcagcagta ccgcggcgag agcgcgctga
     2881 agtcctggat cgggcgcgtg gcctaccaca tcgccctgcg ccacctggag cgcaagcgca
     2941 ttccgctggc cggcgcgcac gatgacgaag gttttccact gaccgaagtc gtcgccgacg
     3001 acttcga
//
LOCUS       DASSVL010000161         3648 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_639196, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000161 DASSVL010000000
VERSION     DASSVL010000161.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3648)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3648)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3648
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_639196"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..417)
                     /locus_tag="VFM52_02715"
     CDS             complement(<1..417)
                     /locus_tag="VFM52_02715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017460980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YajQ family cyclic di-GMP-binding protein"
                     /protein_id="HET8764108.1"
                     /translation="MPSFDVISEVDKHELTNAVDQANRELANRFDFKGADATFALDQA
                     EITLSAPSEFQLQQMLDILRGRLSARKIDLRALDIGTPETGLARAHQVVTVKQGISQA
                     IAKRLVADLKVAKLKVEAQINGDKLRVSGKKRDDLQA"
     gene            complement(492..962)
                     /locus_tag="VFM52_02720"
     CDS             complement(492..962)
                     /locus_tag="VFM52_02720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008209637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YaiI/YqxD family protein"
                     /protein_id="HET8764109.1"
                     /translation="MNAGAQILVDADACPVAIKEILFRAAEREQVAVTLVANQYLRTP
                     PSRFVHAVQVPSGFDVADHEIVRRVAAGDLVVTQDIPLAAAVVDKGALALDPHGELHT
                     RETIAQRLTLRNFMDELRSAGVDTGGHAPFHPRDKQAFATQLDQWLQRRRAGRD"
     gene            complement(959..1840)
                     /locus_tag="VFM52_02725"
     CDS             complement(959..1840)
                     /locus_tag="VFM52_02725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017460976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PhzF family phenazine biosynthesis protein"
                     /protein_id="HET8764110.1"
                     /translation="MSQLRFLHLDVFAARHGGGNHLGVVIGAGAWSAEAMQRFANWAA
                     LVETTFLLPPTTADADYRVRIFTPHKEIPFAGHPSIGSAHAALATGVATARDGSVRQE
                     CGAGVLPIRIEGNGKAQRLLLRAPAASVRERGTGAHPRLAAAIHGMHLGKLPPALVDG
                     GRRWWLVEIDGEAALRAWQPDHAAIAALAQATESMGICAFARSHSGAYQLAVRAFADG
                     AGIAEDPASGAANGLLAAWLAQAEPDGPLAHGYVVSQGREIGFDAELVVRIEAGAVWI
                     GGRTHTIIDGTLDWRDA"
     gene            1959..2564
                     /locus_tag="VFM52_02730"
     CDS             1959..2564
                     /locus_tag="VFM52_02730"
                     /EC_number="3.4.21.105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007507894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rhomboid family intramembrane serine protease"
                     /protein_id="HET8764111.1"
                     /translation="MPITLSILAITCVVSYLAFRNGRLLDDLILWPPAISRKKEYYRL
                     VTYGLVHADFTHLLFNMITLYFFGRVMEGFYASQLGTYGFALFYLGALVVSILPTYLK
                     NRGNADYRSLGASGAVSAVLFGFVLLAPWSLIIVLVIPVPAVVYAVLYTGYSIYMDRR
                     GQGNVNHSAHLWGAAYGVVFTLLVNPRVLPHFLGALLQPSF"
     gene            2623..2991
                     /locus_tag="VFM52_02735"
     CDS             2623..2991
                     /locus_tag="VFM52_02735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015448265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8764112.1"
                     /translation="MQRLLCGLGVIAFAALASGCYVAPPYSYVRGTSYAGSAYYGEGP
                     AVVYRGSYYGYPYDPYYGYGCCWAPGVAVGGVWYRDHDDHGYYRGGYRGQAHRGDGRW
                     HGRDGNRGRRNGHRGDEYGH"
     gene            3063..>3648
                     /locus_tag="VFM52_02740"
     CDS             3063..>3648
                     /locus_tag="VFM52_02740"
                     /EC_number="3.4.11.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019465654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase"
                     /protein_id="HET8764113.1"
                     /translation="MLSGCAGVRYYAQAVRGQAALVVDRQPVRKLLHAPTTDPKLAAR
                     LALALQAREFASRQLGLPDNRSYTRYVDLHRPYVVWNVFAAPRFSVTPVRHCFPIAGC
                     VAYRGWFSEAAAKADAARLHRRGDDVWVSGVPAYSTLGWFADPILSSMLRWDDGELAG
                     TIFHELAHQLIYVKGDTAFNESYATFVQQQGLRQW"
BASE COUNT          495 a         1200 c         1308 g          645 t
ORIGIN      
        1 cgcctgcagg tcgtcgcgct tcttgccgct gacgcgcagc ttgtcgccgt tgatctgcgc
       61 ttcgaccttg agcttggcca ccttgaggtc ggcgacgagg cgtttggcga tcgcctggct
      121 gatgccttgc ttcacggtga cgacctggtg cgcgcgggcg aggccggttt ccggcgtgcc
      181 gatgtcaagt gcgcgcaggt cgatcttccg cgcgctgagc cgcccgcgca ggatgtccag
      241 catctgctgc aactggaact cgctgggagc cgacagggtg atctcggcct ggtcgagcgc
      301 gaacgtcgcg tcggcaccct tgaagtcgaa ccggttggcc agctcgcggt tggcctggtc
      361 gacggcgttg gtcagttcgt gcttgtcgac ttcggagatc acgtcgaagg aaggcatggg
      421 gtcggcctgc ggaaaacggg cagccagtgt gggcgggatc gcgtgccgcg tgcaaccgcg
      481 cgcgtgtggc ttcaatcgcg gccggcgcgg cggcgctgca gccattggtc gagctgggtg
      541 gcgaaggcct gcttgtcgcg cgggtggaac ggtgcgtggc cgccggtgtc gacccccgcg
      601 ctgcgcagct cgtccatgaa attgcgcagc gtgaggcgct gcgcgatggt ttcgcgggtg
      661 tgcagctcgc cgtgcgggtc gagcgccagc gcgcccttgt cgaccactgc cgccgcgagc
      721 gggatgtcct gcgtcaccac caggtcgccg gcggccaccc ggcgcacgat ttcatggtcg
      781 gcgacgtcga agccggacgg cacctgcacc gcgtggacga agcgcgaggg cggcgtgcgc
      841 aggtactggt tggccaccag ggtcaccgcc acctgctcgc gctcggcggc gcggaacagg
      901 atctccttga tcgccaccgg gcaggcgtcg gcgtcgacga gaatctgcgc gccggcgttc
      961 atgcatcccg ccagtcgagc gtgccgtcga tgatggtgtg ggtgcggccg ccgatccaca
     1021 ccgcgccggc ttcgatgcgg acaacgagtt cggcgtcgaa gccgatttcg cggccctggc
     1081 tcacgacgta gccgtgggcc agtgggccat cgggttcggc ttgcgcgagc caggcggcaa
     1141 gcaggccgtt tgccgcgccg gaagccgggt cttcggcaat gccggcgccg tcggcgaagg
     1201 cacgcacggc gagctggtag gcgccggaat ggctgcgcgc gaaggcgcag atgcccatgc
     1261 tttccgtggc ctgcgccagc gccgcgatcg ccgcgtggtc gggttgccag gcgcgcagcg
     1321 cggcttcgcc gtcgatctcg accagccacc agcggcgccc gccgtcgacc agcgcgggcg
     1381 gcagcttgcc cagatgcatg ccgtggatgg cggcagccag ccgcgggtgg gcgccggtgc
     1441 cgcgctcgcg cacgctggcg gccggcgcgc gcagcagcaa ccgctgcgcc ttgccattgc
     1501 cttcgatgcg gatcggaagc acgccggcgc cgcactcctg gcgcacgctg ccgtcgcgtg
     1561 ccgtggcaac gccggtggcg agcgccgcat gcgcgctgcc gatgctcggg tggccggcaa
     1621 acggaatctc cttgtgcggg gtgaagatgc gcacgcggta gtcggcgtcg gccgtggttg
     1681 gtggcagcag gaaggtggtt tcgaccagtg cggcccagtt cgcgaagcgc tgcatggctt
     1741 cggcgctcca ggcgcccgcg ccgatcacca cgccgaggtg gttgccgccg ccgtgccgcg
     1801 cggcaaagac gtcgagatga agaaaacgca gctgggacat ggggcgacac cgcgggcgaa
     1861 agccagtcat cgtagcggac cgccgctggc gcgcatgtcg acatcaccac ggcacgttgc
     1921 gaagatggcg ggcctcgtct ctgcgcaagc cgggttccat gccgatcact ctcagcatcc
     1981 tcgcgatcac ctgcgtggtg tcgtatctcg cgttcaggaa tggccgcctg ctcgacgacc
     2041 tgatcctgtg gccgccggcg atcagccgca agaaggagta ctaccggctg gtgacctacg
     2101 gcctggtgca tgcggacttc acccacctgc tgttcaacat gatcacgctg tatttcttcg
     2161 gccgcgtgat ggaaggcttc tatgcaagcc agctcggcac ctatggcttt gcgctgttct
     2221 atctcggggc gctggtggtc tcgatcctgc cgacctacct caagaaccgc ggcaatgccg
     2281 actaccgcag cctcggcgcc tccggtgcgg tgtcggcggt gctgttcggt ttcgtgctgc
     2341 tggcgccgtg gtcgctgatc atcgtgctgg tgatcccggt gccggcggtg gtgtatgcgg
     2401 tgctctacac cggctattcg atctacatgg atcgccgcgg gcagggcaac gtcaaccaca
     2461 gcgcacacct gtggggcgcg gcgtacggcg tggtgttcac gctgctggtg aacccgcgcg
     2521 tgctgccgca ttttctcggc gcattgctgc aaccgtcgtt ttgagccggt tcaatcgcgg
     2581 catcgcaagc tgtgaccatc tgctcgaaag gaggcctgca ccatgcaacg cctgctttgt
     2641 ggtttggggg tgatcgcatt cgccgcgctg gcgtccggct gctatgtcgc gccgccctac
     2701 agctacgtgc gcggcacgag ctacgccggc tcggcctatt acggcgaagg cccggccgtg
     2761 gtctatcgcg gcagctacta cggctaccca tacgacccgt actacggcta cggctgttgc
     2821 tgggcgccgg gcgtcgccgt cggtggcgtg tggtatcgcg accacgacga ccatggctac
     2881 tatcgtggcg gctatcgcgg ccaggcccat cgtggcgacg ggcgttggca cggtcgggac
     2941 ggcaaccgtg gtcgccgcaa cggtcaccgt ggcgacgagt acggacactg agccgcctgc
     3001 gtgcggtcgc cgcgacggcc tggccgcacg cgtgtcgcgt cgcgctggtt tgtggcgtct
     3061 tcatgctgag tggctgcgcg ggcgtgcggt actacgccca ggccgtgcgc ggtcaggcgg
     3121 cgctggtggt ggatcggcag ccggtgcgca agctgctgca tgcgccaacc actgacccga
     3181 aactcgccgc gcggctggcg ctggcgctgc aggcgcgtga attcgccagc cggcagcttg
     3241 gcctgcccga caaccgcagc tacacccgct acgtcgatct gcaccgcccg tacgtggtgt
     3301 ggaacgtatt tgccgcgccg cggttttcgg taaccccggt acggcactgt ttcccgatcg
     3361 ccggctgcgt ggcgtatcgc ggctggttca gcgaggctgc cgccaaggcc gatgcggccc
     3421 gcctgcatcg gcgcggcgac gacgtgtggg tgagcggggt gccggcgtat tccacgctcg
     3481 gctggttcgc cgacccgatc ctgtccagca tgttgcgctg ggacgacggc gagctggccg
     3541 gcacgatttt ccacgagctg gcgcaccagc tcatctacgt gaagggcgac acggcgttca
     3601 acgagtccta tgccaccttc gtgcagcagc agggcctgcg ccagtggc
//
LOCUS       DASSVL010000162         3877 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_992320, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000162 DASSVL010000000
VERSION     DASSVL010000162.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3877)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3877)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3877
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_992320"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..578
                     /locus_tag="VFM52_02745"
     CDS             <1..578
                     /locus_tag="VFM52_02745"
                     /EC_number="2.1.3.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008434241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_function: GO:0016874 - ligase activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyltransferase
                     subunit beta"
                     /protein_id="HET8764114.1"
                     /translation="RITAAQKKCSEKDALVAMTGTLKGMPLVATAFEFAYMGGSMGSV
                     VGEKFTRAAERALADKSALVGFTATGGARMQEALFSLLQMAKTSAALARLRQAGVPYI
                     SVLTNPTTGGVSASLAMLGDVNIGEPKALIGFAGPRVIEQTVRETLPEGFQRSEFLVE
                     HGAIDLIVDRREMRDKLADLLRILKQLPRAA"
     gene            905..2185
                     /locus_tag="VFM52_02750"
     CDS             905..2185
                     /locus_tag="VFM52_02750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007808105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HET8764115.1"
                     /translation="MDQVSSVAAAPNGEGASAHARGGHRAHDFRVVAGVSAAHMMNDI
                     MQSVILALYPLLKGELDLAFWQVGAITLTFQLTASLLQPVVGMVTDRHPFPLILPLGM
                     FSTLCGLLLLSYAPTYPLVLLSVAMIGIGSSTFHPESSRVARLASGGRYSLAQSVFQI
                     GGNTGQALGPLLVGFFVLRSAGGRIDVAWFGLFALSAMIVLLQVSRWYRGHLRARHKS
                     HAASILPRYPANVVRHTVGLLFVLMVSKFFYLVSISSYYTFYLIHQFGVSARAAANLL
                     GVFLVAIAVGTLIGGVLGDRVGRRQVIWFSILGCAPFTLALPYVGLGMTIALTVVIGL
                     VLASAFPAIIVYAQDLLAHRIGMVSGLFYGFSFGLGGLGAEVLGIVADHYGIVFVYKV
                     CAFLPLLGMLAIFLPDVRPPKIEPAAPAAATATR"
     gene            2255..2839
                     /locus_tag="VFM52_02755"
     CDS             2255..2839
                     /locus_tag="VFM52_02755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008208525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HET8764116.1"
                     /translation="MRFLGKLVAVIVLVLVVLAGWLWSGSYDIGADAPHWKATAKLIN
                     VLRERSIETRLGDIKVPRLDDPALIAEGAAHYSQMCTQCHLAPGMTESDTREGLYPRP
                     PNLTKFAPDPDEAFWIIKHGIKMSGMPAWGKTHSDQKIWAMVAYLQKQPTMGEAQYRE
                     LTAHAADVEDDHGNAADADHGAMPDMPAPAASTH"
     gene            2901..3329
                     /locus_tag="VFM52_02760"
     CDS             2901..3329
                     /locus_tag="VFM52_02760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007513092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal-responsive transcriptional
                     regulator"
                     /protein_id="HET8764117.1"
                     /translation="MDTQTGSSLTIGSVARRVGVAIDTIRYYEREGLMPAPQRRASGY
                     RSYGEAAVVQLRFIRRAKELGFTLEEIRDLLALSADRQRGVKAVKQRAQQRLATITRR
                     IAELTRVRDALAELVASCPGHGKPEQCPILRALTDDEVSA"
     gene            3326..>3877
                     /locus_tag="VFM52_02765"
     CDS             3326..>3877
                     /locus_tag="VFM52_02765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007513094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YHS domain-containing protein"
                     /protein_id="HET8764118.1"
                     /translation="MSARDPVCGMQVDPATAQHHSEHAGETFHFCCAGCKAKFDADPG
                     RYAAVAASTCAAKALPMAPHQHDHAHDHAHAETVTDPVCGMQVDPAKTPHHAQHAGRA
                     YHFCGARCRDKFVADPTAYLASHAPALAAPAGTIYTCPMHPEVRQVGPGACPKCGMAL
                     EPMVPTAEVDDGGEVHAMARRLAA"
BASE COUNT          566 a         1289 c         1364 g          658 t
ORIGIN      
        1 accgcatcac cgcggcgcag aagaagtgca gcgaaaagga cgcgctggtc gccatgaccg
       61 gcacgctcaa gggcatgccg ctggtcgcga ccgcgttcga gtttgcctac atgggcggct
      121 cgatgggttc ggtcgtcggc gagaaattca cccgtgccgc cgaacgcgcg ctggccgaca
      181 agagcgcgct ggtcggtttc accgcgaccg gcggcgcgcg catgcaggag gcgctgttct
      241 cgctgctgca gatggccaag acctcggccg cgctcgcgcg cctgcgccag gccggcgtgc
      301 cctatatcag cgtgctgacc aacccgacca ccggcggcgt gtcggcgagc ctggcgatgc
      361 tgggcgacgt caacatcggc gagccgaagg cgctgatcgg ttttgccggg ccgcgggtga
      421 tcgagcagac ggtgcgcgag accttgccgg aaggcttcca gcgctcggag ttcctggtcg
      481 agcacggcgc gatcgacctc atcgtcgatc gccgcgagat gcgcgacaag ctggccgacc
      541 tgctgcgcat cctgaagcag ttgccgcgcg cggcctgatc gcccgcgtgg tgctgccgcc
      601 ccgatgccgc cgcgaggcgg catcgacgtt tccgcggcgg gtttgtccac cgccggtgtg
      661 gatgcgtggc gcgcaaacct gtggacaagc cgggcacacg gcttgtcgat caggcgcttg
      721 gcttggattg ctcaggtttt gagcaggacg cgccaggcgg tacgatccca ccgctggtgg
      781 cgaacggact ttcgagaccg cacgggcgcg ccgtgcaccc gcatcgggtt ggcgtggctc
      841 catggcttgc tgcgacaatg acgcgtttgt cggcgcgtgc cgacgtcatg caagctggcg
      901 attcatggat caggtttcat cggttgccgc agcgcccaac ggcgagggcg cgtccgcgca
      961 cgcccgcggc gggcaccgcg cccacgattt ccgcgtggtg gccggggtca gtgccgcgca
     1021 catgatgaac gacatcatgc agtcggtgat cctggcgctg tatccactgc tcaagggcga
     1081 gctggatctg gcgttctggc aggtcggtgc catcacgctc accttccagc tcacggcgtc
     1141 gctgctgcag ccggtggtgg gcatggtgac cgaccggcat ccgttcccgc tgatcctgcc
     1201 gctcgggatg ttttccacgc tgtgcgggtt gctgctgctg tcgtacgcgc cgacctaccc
     1261 gctggtgctg ctgtcggtgg cgatgatcgg gatcggttcc tccaccttcc accccgagtc
     1321 ctcgcgcgtg gcgcggctgg cttcgggcgg gcgctacagc ctcgcgcaat ccgtcttcca
     1381 gatcggcggc aacaccgggc aggcgctcgg gccgctgctg gtcgggttct tcgtgctgcg
     1441 cagtgccggc gggcgcatcg acgtggcgtg gttcgggctg ttcgcgctgt cggcgatgat
     1501 cgtgctgctg caggtcagcc gctggtaccg cggccatctg cgcgcgcgcc acaagagcca
     1561 cgcggcgtcg atcctgccgc gctaccccgc caacgtggtg cgccacacgg tgggcctgct
     1621 gttcgtgctg atggtttcca agttcttcta cctggtgagc atcagcagct actacacgtt
     1681 ctacctgatc caccagttcg gggtttccgc acgcgcggcc gccaacctgc tgggcgtgtt
     1741 cctggtcgcg atcgcggtgg gcacgctgat cggcggggtg ctgggcgacc gtgtcgggcg
     1801 ccgccaggtg atctggtttt cgatcctggg ctgtgcgccg ttcacgctgg cgctgccgta
     1861 cgtgggactg ggcatgacga ttgcgctcac cgtggtgatc ggcctcgtgc tggcatcggc
     1921 attcccggcg atcatcgtgt acgcacagga tctgctcgcg catcgcatcg gcatggtgtc
     1981 gggcctgttc tacggcttca gcttcggcct gggcgggctt ggtgccgagg tgctcgggat
     2041 cgtggccgac cactacggca tcgtgttcgt ctacaaggtg tgcgcgttcc tgccgctgct
     2101 cggcatgctg gcgatcttcc tgccggacgt gcggccgccg aagatcgagc cggcggcacc
     2161 ggccgctgcc accgcgacgc ggtgatgccc ggaccccgca ggcgcatgcc aatcggagta
     2221 gggttgggcc tccgtggcgc aggcggagac gacgatgcga tttctcggca agctggttgc
     2281 ggtgatcgtg ttggtgctgg tggtgctggc cggctggttg tggtcgggca gctacgacat
     2341 cggggccgac gccccgcact ggaaagccac ggcgaagctg atcaacgtgc tgcgcgagcg
     2401 ctcgatcgag acccggctcg gcgacatcaa ggtgccgcgg ctggatgatc cagcgttgat
     2461 cgccgagggt gcggcgcatt actcgcagat gtgcacgcag tgccacctcg cgccgggcat
     2521 gaccgaaagc gacacgcgcg agggcttgta tccgcggccg ccgaacctga ccaagttcgc
     2581 ccccgatccg gacgaggcgt tctggatcat caagcacggc atcaagatga gcggcatgcc
     2641 ggcgtggggc aagacgcaca gcgaccagaa gatctgggcg atggtggcct acctgcagaa
     2701 gcagccgacg atgggcgagg cgcaatatcg cgagttgacc gcgcatgccg ccgatgtcga
     2761 ggacgatcac ggcaacgccg ccgacgccga ccacggggcg atgcccgaca tgccggctcc
     2821 ggccgccagc acgcactgaa ccgtttcgcg ccaacgtgcc acttgacctt ggaccttgat
     2881 ccatggtcta gacttgcggc atggacacgc aaaccggcag ttccctcacc atcggctccg
     2941 tcgccaggcg cgtcggcgtc gccatcgaca ccatccgcta ctacgagcgc gaaggcctga
     3001 tgccggcgcc acagcgccgt gcctcgggtt atcgcagcta cggcgaagcg gccgtcgtgc
     3061 agctgcgctt catccgccgc gcgaaggagc tgggcttcac gctggaggaa atccgcgacc
     3121 tgctcgcgct ctccgccgat cgccagcgcg gcgtcaaggc ggtgaagcaa cgcgcgcagc
     3181 agcgcctggc gacgatcacc cggcgcattg ccgagctgac ccgcgtgcgc gatgcgcttg
     3241 ccgagctggt cgcctcgtgc cccggccacg gcaagccgga gcagtgcccg atcctgcgcg
     3301 cgctgaccga cgacgaggtg tcggcatgag cgcccgcgac ccggtgtgcg gcatgcaggt
     3361 cgatccggcc acggcgcagc accactcgga acatgccggc gagacgttcc atttctgctg
     3421 tgccggctgc aaggcgaagt tcgatgccga tccggggcgg tacgccgcgg tcgcggcttc
     3481 gacgtgcgcg gcaaaggcgc tgccgatggc gccgcatcag catgaccatg cacacgatca
     3541 cgcgcacgcc gaaacggtga cggacccggt gtgcggcatg caggtcgatc cggcgaagac
     3601 gccgcatcat gcgcagcatg ccgggcgggc ctatcacttc tgcggcgcgc gttgccgcga
     3661 caagttcgtg gccgacccga cggcgtatct cgcgtcgcat gcccccgcgc tggccgcacc
     3721 ggccggcacg atctacacct gtccgatgca cccggaagtg cggcaggtcg gtccgggcgc
     3781 gtgcccgaag tgcggcatgg cgctggagcc gatggtgccg acggcggagg tggacgatgg
     3841 cggcgaagtc catgccatgg cacggcggct ggcggcg
//
LOCUS       DASSVL010000163         2663 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_300302, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000163 DASSVL010000000
VERSION     DASSVL010000163.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2663)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2663)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2663
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_300302"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..716)
                     /locus_tag="VFM52_02770"
     CDS             complement(<1..716)
                     /locus_tag="VFM52_02770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015446755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004833 - tryptophan 2,3-dioxygenase
                     activity [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0019441 - tryptophan catabolic process to
                     kynurenine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan 2,3-dioxygenase family protein"
                     /protein_id="HET8764119.1"
                     /translation="MTDNRRELEAGIQRDLSGRMTYASYLQLDTLLSAQKPVSDPPYH
                     DEMLFIVQHHVAELWLKLLIHELSAALAMLRADKADQALKVFGRVKRIQQQLFDEWSV
                     LETMTPHEYLAFRDALGPSSGFQSAQYRTVEFMLGNKNADMLAVFDHAPEIRAGLAAT
                     LAAPSLYDEVLRWLARRGHAVPEDILDRDVTQGWQAREDLLPVFRAIYEAPERYWPEY
                     HLCETLVDVEENFQLWRFRH"
     gene            979..2058
                     /gene="pdhA"
                     /locus_tag="VFM52_02775"
     CDS             979..2058
                     /gene="pdhA"
                     /locus_tag="VFM52_02775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016901647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045250 - cytosolic pyruvate
                     dehydrogenase complex [Evidence IEA];
                     GO_function: GO:0004739 - pyruvate dehydrogenase
                     (acetyl-transferring) activity [Evidence IEA];
                     GO_process: GO:0006086 - acetyl-CoA biosynthetic process
                     from pyruvate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase (acetyl-transferring) E1
                     component subunit alpha"
                     /protein_id="HET8764120.1"
                     /translation="MTIAAKFEIEYLQYLDAEGKQVRDDLPAFTKDLGHMVELYKLML
                     STRVFDAKSIALQRTGKLGTYASCLGHEAAHVGVGSAMQPEDVLAPSYREYGAQLYRG
                     VQPREVYMYWGGDERGNDYQKEPARHDFAWSVPIATQCLHAAGTALAFKIRGEKRVAV
                     CMIGDGGSSKGDFSGAINIAGARKLPLVAVIVNNQWAISVPRKIQSGAKTLAQKGIAA
                     GLHCIQVDGNDIIAVRKAMEDALERARKGDGGSVVEAVTYRLGDHTTADDARRYRGEK
                     EVKDAWAREPLKRLRNWLTAKGAWDDKQEEAWKAHCDEWMDDEVNAYLETKPQPVTAM
                     FDYIFAELPADLAKQRAAMLAREAQ"
     gene            2071..>2663
                     /locus_tag="VFM52_02780"
     CDS             2071..>2663
                     /locus_tag="VFM52_02780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017460579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-ketoacid dehydrogenase subunit beta"
                     /protein_id="HET8764121.1"
                     /translation="MAQITLIEAVTQALAYEMQHDDSVVVLGEDVGVNGGVFRATVGL
                     AEKFGEWRVFDTPLDELTIAGVTVGLAVQGMKPIAEAQFEGFIYPMMEQIACHAARMR
                     NRTRGRLTCPAVFRAPWGGGIHAPEHHSEANEHLFTNIPGLRVVLPSSPARAYGLLLA
                     AIRDPDPVVFFEPKRIYRQYKEEVPDDGEALPLDVCFV"
BASE COUNT          460 a          924 c          872 g          407 t
ORIGIN      
        1 atgtggcgga agcgccacag ctggaaattc tcctccacgt ccaccagcgt ctcgcacagg
       61 tggtactccg gccagtaccg ctccggcgcc tcgtagatcg cgcggaacac cggcagcaag
      121 tcctcgcgcg cctgccagcc ctgggtcacg tcgcggtcaa ggatgtcctc gggcactgcg
      181 tggccgcgcc gcgccagcca gcgcaggacc tcgtcgtaca ggctgggcgc cgcgagcgtc
      241 gcggccaggc cagcccgaat ctccggcgcg tggtcgaaca ccgcgagcat gtcggcgttc
      301 ttgttgccga gcatgaactc caccgtgcgg tactgcgccg actggaagcc cgacgacggc
      361 ccgagcgcat cgcggaacgc gaggtattcg tgcggcgtca tcgtctccag caccgaccac
      421 tcgtcgaaca gctgctgctg gatgcgcttg acccggccga acaccttgag cgcctggtcg
      481 gccttgtccg cgcgcagcat cgccagcgcc gcggagagct cgtggatcag gagcttcagc
      541 cacagctcgg ccacgtggtg ctgcacgatg aacagcatct cgtcgtgata cggcggatcg
      601 gacaccggtt tctgcgcgga cagcagcgtg tccagctgca ggtagctcgc gtaggtcatg
      661 cggccggaaa ggtcgcgctg gatgcctgct tcaagttcgc gtcgattgtc cgtcatccgg
      721 atgtgcctgg ctgcgaaact gcgcagtcta gtgcgttgcg gcacgacgct gccgacctgg
      781 atcaagagct tgctgcgcag gcatcccgta cctcggcgca tgttgcgccg tgccttgctg
      841 cacgatgccg gcgcctgcta tcaatgcgca gttttcttcg gccgttttga ttgcagcgag
      901 catcatcggc cgcgacgcgc gccgccccac tggatgggtt gccgccccca ccttccccct
      961 cgccaccggg agcgattcgt gaccatcgcc gccaagttcg aaatcgaata cctccaatat
     1021 ctcgacgccg agggcaagca ggtacgtgac gacctgcccg ccttcaccaa ggacctcggc
     1081 cacatggtcg agctgtacaa gctgatgctg tccacccgcg tgttcgacgc caagtcgatc
     1141 gcgctgcagc gcaccggcaa gctcggcacc tacgccagct gcctcggcca cgaggccgcg
     1201 cacgtcggcg tcggcagcgc catgcagccg gaagacgtgc tggccccgag ctaccgcgaa
     1261 tacggcgcgc agctctaccg cggcgtgcag ccgcgcgagg tgtacatgta ctggggcggc
     1321 gacgagcgcg gcaacgacta ccagaaggag cccgcgcgcc acgacttcgc gtggagcgtg
     1381 ccgatcgcca cccagtgcct gcacgccgcc ggcaccgcgc tcgcgttcaa gatccgcggc
     1441 gagaagcgcg tcgcggtgtg catgatcggc gacggcggct cgtccaaggg cgatttcagc
     1501 ggcgcgatca acattgccgg cgcgcgcaag ctgccgctgg tggcggtgat cgtcaacaac
     1561 cagtgggcga tctcggtgcc gcgcaagatc cagtccggcg ccaagacgct ggcgcagaag
     1621 ggcatcgccg ccgggctgca ctgcatccag gtcgacggca acgacatcat cgcggtgcgc
     1681 aaggcgatgg aagacgcgct ggagcgcgcg cgcaagggcg acggcggcag cgtggtcgag
     1741 gcggtcacct accgcctcgg cgaccacacc accgccgacg acgcgcgccg ctaccgcggc
     1801 gagaaggaag tgaaggacgc ctgggcgcgc gaaccgctca agcgcctgcg caactggctc
     1861 accgcgaagg gcgcgtggga cgacaagcag gaggaagcct ggaaggccca ttgcgacgaa
     1921 tggatggacg acgaggtcaa cgcctacctc gaaaccaagc cccagccggt caccgcgatg
     1981 ttcgactaca tcttcgccga acttcccgcc gacctcgcca agcagcgcgc agccatgctt
     2041 gcgcgcgaag cgcagtaagg atcttcatcc atggcacaga tcactctgat tgaagcggtt
     2101 acccaggcgc ttgcctacga aatgcagcac gacgacagcg tcgtcgtgct cggcgaggac
     2161 gtgggcgtca acggcggcgt gttccgcgcc accgtcggcc tggcggaaaa gtttggcgaa
     2221 tggcgcgtat tcgacacgcc gctggacgag ctgacgattg ccggcgtcac cgtcggcctt
     2281 gcggtgcaag gcatgaagcc gatcgccgag gcgcagttcg agggcttcat ctatccgatg
     2341 atggagcaga tcgcctgcca cgccgcgcgc atgcgcaacc gcacccgcgg ccgcctgacc
     2401 tgcccggcgg tgttccgcgc gccgtggggc ggcggcatcc acgcgccgga gcaccactcc
     2461 gaggcgaacg aacacctgtt caccaacatc cccggcctgc gcgttgtgct gccctcctcg
     2521 ccggcgcgcg cctacggcct gctgctggct gccatccgcg accccgatcc ggtggtgttc
     2581 ttcgagccca agcgcatcta ccgccagtac aaggaagagg tgccggacga cggcgaggcg
     2641 ctgccgctgg acgtgtgctt cgt
//
LOCUS       DASSVL010000164         2392 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_357039, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000164 DASSVL010000000
VERSION     DASSVL010000164.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2392)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2392)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2392
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_357039"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1163)
                     /locus_tag="VFM52_02785"
     CDS             complement(<1..1163)
                     /locus_tag="VFM52_02785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8764122.1"
                     /translation="MSSGTATQASTHAVKPAYSTAMHINCAQAAALCTEVANSDKVFG
                     HYVGHDEPSLAFYSHKAGSGNHMSYIVTLPKEPPATNPNNVNKAYSFELSGADWFGMA
                     ICDTQSYPEQIKTCPPDSDSNILNPATSPRHAGTAFMEMQFYPPGWIQWPTWRVAVGA
                     SSCDPTKWCAALNIDSLSLNPVTNQANNAGCLAKAGEEYLNFAFITKNGKSTGPANPI
                     HSTLATFTPSAQKDLFMNQGDRVKTTIGDTPNGVKIVLNDLTTGQSGSMTASKANGFA
                     QIKFDPNGTSCKAIPYNFHPMYSTSSPKTRVTWAAHSYNVAFDSEIGHFQFCNGPVAI
                     PATEFGTLPNGNPTVCPKGDTEGRGVNATKPDGDDAFCFPAKEAPLYKVAGCT"
     gene            1427..2248
                     /locus_tag="VFM52_02790"
     CDS             1427..2248
                     /locus_tag="VFM52_02790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="protein phosphatase 2C domain-containing
                     protein"
                     /protein_id="HET8764123.1"
                     /translation="MQVLLASEPGAADRPNEDFAAVVPGAVVLLDGAGYVPESGIGCV
                     HGIAWYARTLGGLLAAGVCDDRLPLTELLSRGIERVSQMHAGTCDLGHPATPGATVII
                     ARQRGDTLEYLVLCDSVLVLRPRAGEPRAITDAQLAETMARFRPAASLRRGSPERDAA
                     WRAYTRELEDARNRPGGYWLAAADPAAAGHALTGSEPLAGLSAVAVLSDGASRLADRF
                     HLASWAEVCDILCRDGPPGLIERVRAAESTDPRGERWPRGKIHDDATAVFWPIPG"
BASE COUNT          349 a          794 c          844 g          405 t
ORIGIN      
        1 aaggtgcagc cggcgacctt gtacagcggt gcctccttgg ccgggaagca gaaagcgtca
       61 tcgccgtccg gcttcgtcgc attgacgccc cgcccctcgg tgtcgccctt ggggcagacc
      121 gtcgggttgc cgttgggcag cgtaccgaac tcggtagccg ggatcgccac cgggccgttg
      181 cagaactgga agtggccgat ctcgctgtcg aacgcgacgt tatacgaatg cgccgcccag
      241 gtaacccgcg tcttcgggct cgacgtgctg tacatcgggt ggaagttgta cgggatcgct
      301 ttgcaggacg tgccgttggg gtcgaacttg atctgcgcga acccgttggc cttgctggcc
      361 gtcatggacc cgctctggcc cgtggtgagg tcgttgagga cgatcttgac gccgttcggg
      421 gtgtcgccga tcgtcgtctt cacccggtcg ccctggttca tgaacaggtc cttttgggcg
      481 ctcggcgtga acgtggccag cgtcgagtgg atggggttgg cgggacccgt ggacttgccg
      541 ttcttggtga tgaaggcgaa gttgaggtac tcctcaccgg ccttggccag gcagccggcg
      601 ttgttcgcct ggttggtcac cgggttcagc gacaggctgt cgatgttcag cgcggcacac
      661 cacttggtgg ggtcgcagga gctggcgccc acggccaccc gccatgtcgg ccactggatc
      721 cacccgggcg ggtagaactg catctccatg aaggccgtgc ccgcgtgccg ggggctggtc
      781 gccgggttga ggatgttgct gtcgctgtcc ggcgggcacg tcttgatctg ctcggggtac
      841 gactgcgtgt cgcagatggc catgccgaac cagtcggcgc cgctcagctc gaaggagtag
      901 gccttgttca cgttgttcgg gttggtcgcc ggtggctcct tgggcagcgt cacgatgtag
      961 ctcatgtggt tgccggaccc ggccttgtgc gagtagaagg ccagcgacgg ctcgtcgtgg
     1021 cccacgtagt ggccgaacac cttgtcggag ttcgcgacct cggtgcaaag cgcggcggcc
     1081 tgtgcgcaat tgatgtgcat ggccgtcgaa taggctggtt tgaccgcgtg ggtcgaggct
     1141 tgcgtggcag taccgctgct catcgcgacg gtcgcgatgg ccaccgctgc ggtcgcagcc
     1201 acatacatcc atgacctgaa gggcattctc aaaaccccac ctcctcgtgg atgaagaccc
     1261 gggcagcgtc cgccaagccc tgtgcaccac ctgccgccct cgggcacttt gcctagaatc
     1321 gcaccccact ttccgcgcgt ccatagatca cttgcggctc tgtttgctca gacgacaaca
     1381 tcagcgccgg aagtggcaca cccggcaatc ggccataatc gccggtatgc aggtgctgct
     1441 ggccagcgag cccggcgcgg cggaccggcc gaacgaggac ttcgccgccg tcgtgcccgg
     1501 agccgtggtg ctactcgacg gagccggata cgtgccggag tcgggcatcg gctgcgtgca
     1561 cggcatcgcc tggtacgcac gcacgctcgg cggcctgctc gccgccgggg tctgcgacga
     1621 ccggctgccg ctcaccgaac tgctcagccg gggaatcgag cgggtcagcc agatgcacgc
     1681 gggcacctgc gacctcgggc acccggccac cccgggcgcc accgtgatca tcgcccggca
     1741 gcgcggcgac acgctggaat acctggtgct gtgcgactcg gtgctggtgc tacggccgcg
     1801 cgcgggcgag ccacgcgcga tcaccgacgc ccagctcgcc gagaccatgg ccaggttccg
     1861 gcccgccgcc agcctgcggc gcggcagccc ggaacgcgac gccgcgtggc gggcctacac
     1921 gcgggaactg gaggatgcgc gcaaccggcc cggcgggtac tggctcgcgg ccgcggaccc
     1981 ggccgccgcg ggccacgcac tgaccggctc cgagccgctg gcaggcctgt ccgcggtggc
     2041 ggtgctcagc gacggcgcca gccgcctggc cgaccggttc cacctggcct cctgggccga
     2101 ggtctgtgac attctttgcc gtgacggacc accggggctg atcgagcgcg tccgggcggc
     2161 cgagtccacc gatcccaggg gcgagcgctg gccccggggc aagatccacg acgacgccac
     2221 cgccgtcttc tggccgatcc cgggctgagt tccgcgcgct gggggcaggg tgccacgggg
     2281 cgtcgtatgg caaagaaatc gagcccgtgc cgaccggggg cccggcgtgc aagggaggta
     2341 gcacgacggc tgcccgaagc caggattacc cgaagccaac gtcatggcga ag
//
LOCUS       DASSVL010000165         5875 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1077372,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000165 DASSVL010000000
VERSION     DASSVL010000165.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 5875)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5875)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5875
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1077372"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..327)
                     /gene="gspN"
                     /locus_tag="VFM52_02795"
     CDS             complement(<1..327)
                     /gene="gspN"
                     /locus_tag="VFM52_02795"
                     /inference="COORDINATES: protein motif:HMM:NF013376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015627 - type II protein secretion
                     system complex [Evidence IEA];
                     GO_process: GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein N"
                     /protein_id="HET8764124.1"
                     /translation="MTALVVVLAVGVTTWWLPASWASPWLAHAVPGLRLQQLGGTVWN
                     GRAERVLAADGTMVGRAQWRLSRMALLGHSQLWLRVTGPRLDVRGEMRRLAGDRVEWR
                     DLVARVD"
     gene            650..1384
                     /locus_tag="VFM52_02800"
     CDS             650..1384
                     /locus_tag="VFM52_02800"
                     /EC_number="2.1.1.193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017462740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (uracil(1498)-N(3))-methyltransferase"
                     /protein_id="HET8764125.1"
                     /translation="MRTIRTYVDLPLAAGTELDLPAVAIEHVVRVLRLTAGDAVTLFN
                     GDGHDYAATLLSAGRGAARVRIASQLANAAESPLPLTLAQGIARGDKMDLIVQKATEL
                     GAARVVPLITERSEVRLDAARAAKRHAHWRAVAASACEQCGRSRVPDILPALPLAAWL
                     AALAGDGALRLALLPVATLSLRACQPPAAGAVLVIGPEGGLGARDVEALGAAGFAGLR
                     LGPRILRTETAGIAALAALQALHGDF"
     gene            complement(1514..2011)
                     /locus_tag="VFM52_02805"
     CDS             complement(1514..2011)
                     /locus_tag="VFM52_02805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015447003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheW"
                     /protein_id="HET8764126.1"
                     /translation="MSDELPREIRCVLVPTGDIRMLLPNATVAEVITQPAHEAVAGAP
                     EWLVGRIAWRGWRVPLIAFTRMTGAGDGNAELTVRVAVLKALGGHPQLPFIAVLTQGF
                     PRLTTLNAELIIPTHDGKPLPAGVKSQVLVRDDVAVIPDLEGIEAELLNWLPATDAEP
                     ASLDA"
     gene            complement(2008..3591)
                     /locus_tag="VFM52_02810"
     CDS             complement(2008..3591)
                     /locus_tag="VFM52_02810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007507038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0008984 - protein-glutamate methylesterase
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheB"
                     /protein_id="HET8764127.1"
                     /translation="MTEPLPSVALLFDEAELGGHLREALAERGVRIAYEGPLAGFSAA
                     QLRQVDPDVLVVNLDDDDDAAFDRLYAMIDGERPRLVFNDAQASRALAGWDRARWARH
                     LAVKVLAGGDTDPPRPAGAVAPELQEAARSDAVPPAPVVRAEESLPVAAPAADVEPAD
                     PVHELDADDVEQLLTPPADLEAELAALLAAEALPADTGEVPDADLPAIEVAAFDDPAV
                     EPASGTAPAAADSGAVALSATGDFDLQTDAEVVAAKPPAVPDWSLVDDAAPSPTPAGA
                     AEAAQDEELSRLEKLSAADFLAPDVEPVAPDIEPRLNLELVSMEEAVAPQPWEPHEML
                     LDDLDGVPHHVVLLGAAADGVEAVGTFLAGVPADSKLTLLLIQHFGAQPVADVLARLA
                     AQSSLPVRLVANGDRARGGEVLLAPADSIVQVRRDGSVELRATDAAIVPVPPIDAAFS
                     MAANAFGREALGIVFAGASTDAVAGAQAIHDRGGQVWVETSSGEHFDDMVGALFAERL
                     VSHSGTPQELAAHLAEVYA"
     gene            complement(3584..>5875)
                     /locus_tag="VFM52_02815"
     CDS             complement(3584..>5875)
                     /locus_tag="VFM52_02815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017462743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HET8764128.1"
                     /translation="EEGVDLLDHSDGLLAQLRDAPGEREPLVGLQRDLHTLKGGARIA
                     GLAAIGDLAHATETLLEKPLADEQLAPALIGVLEATFDQLNAMVQEVAQGRAPAYPQA
                     ALDRLQAPLGAAHAAAFAPAAPVAEPVPEHHAGEAHVVQEQIRVRAELLDDLVNHAGE
                     VAIYRARLEQQVSGYRSNLAELDQTVQRLRSQLRMLEIETEAQIIARYQRENRETGAA
                     PVFDPLELDRFSQLQQYSRALAESVSDLVSIQGTLDELTRQAENLLVQQSRVDTELQD
                     GLLRTRMLPFDTMVPNLRRTLRQAAMEQGKQAQLVVDGAHGEMDRNLLDRIKAPFEHM
                     LRNAVAHGIESPAERRQAGKPAEGTVRIGVVREANEVVIRVGDDGRGLNREAIRARGI
                     ERGLLRADERTSDERLLGLITQTGFSTASTVTQLAGRGVGMDVVANEIKQLGGSLAIE
                     SETGHGTTFTLRLPFTLAVTQAILVRVGETMFAIPMTSVQGVARVDPDELATWLTQPE
                     PSFEYDGAAYGIHDLAELLGLPPGAVPEGEQPPLLISRAGDMRAAIRVDAVLGSREVV
                     VKSVGPQISSVPGVLGATILGDGSVLVILDLAPLVRHSIARRAQRLAEGETAAPVLVV
                     EEQRTRPLVMVVDDSITMRKVTGRVLERHEYEVGTAKDGVDALEKLNERVPDLMLLDI
                     EMPRMDGYELATHMKEDPRLRNVPIIMITSRTGEKHRQRALDIGVDRYLGKPYQETEL
                     LAQIAEVLEQRALAVAEAGSGHD"
BASE COUNT          834 a         2168 c         2018 g          855 t
ORIGIN      
        1 gtcgacgcgt gcgacgaggt cgcgccactc gacccgatcg cccgccaggc gccgcatctc
       61 gccgcgcacg tcgaggcgcg gcccggtcac gcgcagccac agctgcgaat ggccgagcaa
      121 cgccatgcgc gagagccgcc attgcgcacg gccaaccatc gtgccgtcgg ccgccagcac
      181 gcgctcggca cggccgttcc acaccgtgcc gccaagctgt tgcaggcgca gccccggcac
      241 cgcgtgggcg agccacggcg acgcccagct tgccggcagc caccaggtcg tcacgccgac
      301 cgcgagcacg acgaccagcg ccgtcaatcc gattttttgc cgaagtcgca aactgcgcat
      361 cccgagggcg atgcgcgggt ttccccgcaa atggacgtcc gatgatagcg gcaaccacca
      421 acgtccctgt ggaccggcat tcagccctac gctggcccgc tccccgtcac gaccggcggg
      481 ctgaagcccg atccgccgtt gccagtgcgt ggtcgaggtg aatcctgacc tgcgaaaaat
      541 ctccgcgggc cgggctccag cccgacggtc gtggctgatc gccggacaac tcggaatggg
      601 atcgggtcgc caacgctccg ctatgctggc gctttgccgt ctgccgccca tgcgcaccat
      661 ccgcacctac gtcgacctgc cgcttgccgc cggcaccgag ctggatctgc cggcggtagc
      721 catcgagcac gtcgtgcgcg tgctgcggct caccgcgggc gacgcggtca ccctgttcaa
      781 cggcgacggc cacgactatg cggcaacctt gctgagcgcg ggccggggcg cggcgcgcgt
      841 gcgcatcgcg tcgcagctgg cgaacgccgc ggaatcaccg ctgccgctga ccctggcgca
      901 aggcatcgcc cgcggcgaca agatggatct catcgtgcag aaagccaccg agctcggcgc
      961 cgcccgcgtg gttccgctga tcaccgaacg ttccgaagtg cggctcgatg cggcacgcgc
     1021 cgccaagcgc catgcccact ggcgtgccgt cgcggccagc gcctgcgagc agtgcggccg
     1081 ttcgcgggta ccggacatcc tgcccgcgct gccgctcgcg gcgtggctcg cagcgctcgc
     1141 cggcgatggt gcgttgcgcc tggctctgct gccggtcgcg acactctcgc tgcgtgcatg
     1201 ccagccgccg gccgccggtg ccgtgctggt gatcggcccg gaaggcggac tcggtgcgcg
     1261 cgacgtcgag gcgctggggg ccgccgggtt tgccggcctc cggctcggcc cgcgcatcct
     1321 gcgcaccgag accgccggca ttgccgcact cgcggcgttg caggcgctgc acggggattt
     1381 ttgagccagc ccgaagcagc ggtgacgccg tgccaggcac agcatgctgc atcgacgcgt
     1441 tcgcccggtg cccgcgaact acccgaatgg ccaccggcgc ggcgcgggtt ccggacccgg
     1501 ggacaaccgg aactcaggcg tcgagtgacg ccggttccgc gtccgtcgcc ggcaaccagt
     1561 tcagcagctc ggcctcgatg ccctccaggt ccgggatgac ggcgacatcg tcgcgcacca
     1621 gcacctgcga tttcaccccg gccggcaacg gcttgccgtc atgggtgggg atgatgagct
     1681 cggcgttgag cgtcgtcagg cgcgggaagc cctgggtcag caccgcgatg aacggcagtt
     1741 gcgggtggcc gccgagcgcc ttgagcacgg cgacgcgcac cgtcagttcg gcattgccgt
     1801 cgccggcgcc ggtcatcctg gtgaacgcga tcaatggcac ccgccagccg cgccaggcaa
     1861 tgcgccccac cagccactcc ggcgcaccgg caacggcctc gtgcgccggc tgggtgatga
     1921 cctcggccac cgttgcgttc ggcagcaaca tgcggatgtc gccggtgggt accagcacgc
     1981 accggatttc gcgcggcagt tcgtcgctca tgcatagacc tcggcaagat gcgccgccag
     2041 ctcctgcggc gttccggaat gactgaccag acgttcggcg aagagcgcgc cgaccatgtc
     2101 gtcgaaatgc tcgccgctgg aagtctcgac ccacacctgc ccgccgcgat cgtggatcgc
     2161 ctgggcaccg gccacggcat cggtcgacgc ccccgcgaac acgatgccga gcgcctcgcg
     2221 cccgaacgcg ttggcggcca tgctgaaggc ggcgtcgatc ggcggcaccg gcacgatcgc
     2281 ggcatcggtg gcgcgcagct cgacgctgcc gtcgcggcgc acctgcacga tgctgtccgc
     2341 cggcgccagc agcacttcgc cgccgcgtgc gcggtcgccg ttggcaacca gccgcaccgg
     2401 caagctcgac tgcgcggcca gccgcgcgag cacgtcggcc accggctgtg cgccgaaatg
     2461 ctggatcagc agcagggtca gcttcgagtc ggcgggcacg ccggccagga acgtgccgac
     2521 cgcctcgacg ccgtccgcgg cggcaccaag cagcacgacg tggtgcggta cgccgtcgag
     2581 gtcgtcgagc agcatctcgt gcggctccca cggctgcggc gcgaccgcct cctccatcga
     2641 gaccagctcc aggttcaacc tgggctcgat atcgggcgcg accggctcga cgtcgggcgc
     2701 gagaaagtcc gcggcactca gcttttcgag ccggctgagt tcctcatcct gcgcggcctc
     2761 cgcagcgccg gcaggcgtcg gcgagggggc ggcatcgtcg accagcgacc aatcgggcac
     2821 ggcaggcggc ttggccgcca cgacctccgc gtcggtctgc agatcgaagt cgccggtggc
     2881 ggacaaggcc accgcgcctg aatccgcagc cgcgggcgca gtgccggagg ccggttcaac
     2941 cgccggatcg tcgaacgcag ccacttcgat ggccgggaga tcggcgtccg ggacctcgcc
     3001 ggtgtcggcc ggcagcgcct cggcggccag cagggccgcc agctcagctt ccaggtcggc
     3061 gggcggcgtc agcaattgct ccacgtcatc ggcatcgagc tcgtgcaccg gatcggcggg
     3121 ctccacatcg gcagccggcg cggcgacggg caacgattct tcagcccgca ccaccggcgc
     3181 cggcggtact gcatcggagc gtgccgcctc ctggagctct ggcgcgacgg cgccggccgg
     3241 ccgcggcgga tcggtgtcgc cgccggccag caccttcacc gcgaggtggc gcgcccagcg
     3301 ggcgcgatcc cagccggcca gcgcgcggct ggcctgggca tcgttgaaca ccagccgcgg
     3361 ccgctcgccg tcgatcatcg cgtacagccg gtcgaacgcc gcgtcgtcat cgtcgtcgag
     3421 gttcaccacc agcacgtcgg ggtcgacctg gcgcagctgc gcggcgctga agccggccag
     3481 cggcccctcg tacgcaatgc gcacgccacg ctcggcaagc gcctcgcgca ggtggccgcc
     3541 cagttcggcc tcgtcgaaca gcagcgcgac cgacggcagc ggctcagtca tggccgctcc
     3601 ccgcctcggc gactgccagc gcgcgctgtt ccagtacttc ggcaatctgc gccagcagct
     3661 cggtctcctg gtagggcttg ccgaggtagc gatccacgcc gatgtcgagc gcgcgctggc
     3721 gatgcttctc gccggtgcgc gaggtgatca tgatgatcgg cacgttgcgc aggcgcggat
     3781 cctccttcat gtgggtggcc agctcgtagc cgtccatgcg cggcatctcg atgtcgagca
     3841 gcatcaggtc cggcacgcgt tcgttgagtt tttccagcgc gtcgacgccg tccttcgcgg
     3901 tacccacctc gtactcgtgg cgctccagca cgcgcccggt gaccttgcgc atggtgatcg
     3961 aatcgtccac caccatgacc agcggccgcg tacgctgctc ctcgaccacc agcaccggtg
     4021 ccgccgtctc gccttccgcc aggcgctgcg cgcggcgggc gatgctgtgc cgcaccagcg
     4081 gcgcgaggtc gagaatcacc agcaccgagc cgtcgcccag gatggtcgcg ccgagcacgc
     4141 cgggcaccga gctgatctgc gggccgaccg acttcaccac gacctcgcgc gagccgagca
     4201 cggcgtcgac ccggatcgcg gcgcgcatgt cgccggcccg gctgatcagc agtggcggct
     4261 gttcaccttc cggcaccgcg cccggcggca ggccgagcag ctcggcaagg tcatggatgc
     4321 cgtacgccgc accgtcgtac tcgaagctgg gttccggctg ggtgagccac gtcgccaact
     4381 catccggatc gacccgcgcg acgccctgca ccgacgtcat cgggatcgcg aacatggttt
     4441 cgccgacgcg caccaggatc gcctgggtca ccgcaagggt gaacggcagg cgcagggtga
     4501 acgtggtgcc gtggccagtc tccgactcga tcgccagcga gccgccgagc tgcttgatct
     4561 cgttcgccac cacgtccatg ccgacgccgc ggccggcgag ctgggtcacc gtgctcgcgg
     4621 tggagaaacc ggtctgggtg atcaggccga gcaggcgctc gtcgctggtg cgctcgtcgg
     4681 cgcgcagcag accacgctcg atgccacgcg cgcggatcgc ctcgcggttc aggccgcggc
     4741 cgtcgtcgcc gacgcggatc accacctcgt tggcctcgcg cacgacaccg atgcgcaccg
     4801 tgccttcggc cggcttgccg gcctggcggc gctcggccgg cgactcgatg ccgtgcgcca
     4861 ccgcattgcg cagcatgtgc tcgaacggcg ccttgatgcg gtcgagcagg ttgcggtcca
     4921 tttcgccatg cgcgccatcc accaccagct gcgcctgctt gccctgctcc atcgcggcct
     4981 ggcgcagcgt gcgccgcagg ttcggcacca tggtgtcgaa cggcagcatg cgcgtgcgca
     5041 gcagaccgtc ctgcagttcg gtatcgaccc gcgactgctg caccagcagg ttctcggcct
     5101 ggcgggtcaa ttcatccagc gtgccctgga tggacaccag gtccgaaacc gactcggcca
     5161 gcgcacgcga gtactgctgc aattgcgaga agcggtcgag ttcgagcgga tcgaacaccg
     5221 gcgccgcgcc ggtctcgcgg ttctcgcgct ggtagcgcgc gatgatctgc gcctcggtct
     5281 cgatctccag catgcgcaac tggctgcgca ggcgctgcac ggtctggtcc agctccgcaa
     5341 ggttcgagcg gtagccggac acctgctgtt cgaggcgggc acggtagatc gccacctcgc
     5401 ccgcatggtt gaccaggtca tcgagcagtt cggcgcggac gcggatctgt tcctgcacca
     5461 cgtgggcctc gcccgcgtgg tgctcgggca ctggctccgc gaccggtgcg gcgggggcga
     5521 aagccgccgc gtgggctgcg cccaacggcg cctgcagacg atcgagcgcg gcttgcggat
     5581 aggccggggc gcggccttgc gccacctcct gcaccatcgc gttgagctgg tcgaacgtcg
     5641 cctcgagcac gccgatcagg gccggcgcga gctgctcatc ggccaacggc ttttcgagca
     5701 gcgtttcggt ggcgtgcgcg aggtcgccga tcgccgccag cccggcaatg cgcgcgccgc
     5761 ccttgagcgt gtgcaggtcg cgctgcaggc cgaccagcgg ctcgcgctcg cccggcgcat
     5821 cgcgcagctg cgcgagcagg ccgtcggaat ggtcgagcag gtcgacgcct tcctc
//
LOCUS       DASSVL010000166         3377 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_46058, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000166 DASSVL010000000
VERSION     DASSVL010000166.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3377)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3377)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3377
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_46058"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1316)
                     /locus_tag="VFM52_02820"
     CDS             complement(<1..1316)
                     /locus_tag="VFM52_02820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008434130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyltransferase family protein"
                     /protein_id="HET8764129.1"
                     /translation="MNFSLHVRALLCGFLLAGGAAWAAEPAAPPPASAPGHAGIASAS
                     NYATDAGFAVLAKGGNAFDAAVAVAAALSVVEPESSGIGGGFMATLHLAKDNRNVFID
                     ARETAPMAVNPKDYLNPDGTPNRDTALKGPLSAGIPGEPAGLVLLAERYGKLPLAESL
                     APAIKLARDGFKPSPRLLRSIADEQKNLTRWPASAAKFLPGGKPPVAGEIWRDPGQAS
                     TLELIAKHGNAGFYQGETAKKLVDAVRAAGGNWTLADLANYRAKERTPITVDYQGYHI
                     VTAPPPSSGGVAIAEMLNILRGYDLTGMGKAERAHYEIEAMRRAYRDHNDYLGDPDFV
                     QMPLAMLLSPYYADGLRQSILKDRATPSDMLPHESIHEPGQHTTHFSIIDKDGNMVGI
                     TSTVNYILGSTFVAKGTGVLLNDEMDDFALVPNKPNVYGLLGSTANA"
     gene            complement(1421..1927)
                     /locus_tag="VFM52_02825"
     CDS             complement(1421..1927)
                     /locus_tag="VFM52_02825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007807939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8764130.1"
                     /translation="MRKFVFVAAIALTAGLALGGCSKQAPEEDQASTQQAAAPTKPTS
                     VNDTKGWQAYLGPIIQKNLQGMAAQQPYVYFITPGQTDDDKAMNDRQLSNVEDTVARG
                     VTPGNLLAFAGPVSATTADLVAAAFKDAQAGSFKGVIVLFIGDKADEQRVGDAIKTTG
                     ATYRFVQM"
     gene            complement(1920..2471)
                     /gene="coaD"
                     /locus_tag="VFM52_02830"
     CDS             complement(1920..2471)
                     /gene="coaD"
                     /locus_tag="VFM52_02830"
                     /EC_number="2.7.7.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017462007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004595 - pantetheine-phosphate
                     adenylyltransferase activity [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pantetheine-phosphate adenylyltransferase"
                     /protein_id="HET8764131.1"
                     /translation="MNTTPGNPRLAVYPGTFDPITNGHADLVSRAAPLFDRVVVAVAE
                     SSSKNPAFSLADRITLARLALADLRNVEVRGFDCLLADFVTEVGAGVLLRGLRAVSDF
                     EYEFQLASMNRHLIPQVETLFLTPAEQYSFISSSLVREIGRLGGDISSFVHPAVQQAM
                     RQRWHTGRAGGYSKPETEGDHHA"
     gene            complement(2499..3077)
                     /gene="rsmD"
                     /locus_tag="VFM52_02835"
     CDS             complement(2499..3077)
                     /gene="rsmD"
                     /locus_tag="VFM52_02835"
                     /EC_number="2.1.1.171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015448530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0052913 - 16S rRNA
                     (guanine(966)-N(2))-methyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0031167 - rRNA methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(966)-N(2))-methyltransferase
                     RsmD"
                     /protein_id="HET8764132.1"
                     /translation="MSGHPGRVRIIGGSLRNSRLAVPGLPGLRPTPERVRETLFNWLA
                     PVIAGANVLDLCAGTGALGIEALSRGAAHVRFVEPDARAADALRANLVRLRADGGEVF
                     AGSAQAFLRGTPQAGDIAFLDPPFALGLWGELARALEAGWLATRAWIYVECPRAAAPV
                     LPANWVPHREGQAGEVRYALYRREPAIPTLLS"
     gene            3154..>3377
                     /locus_tag="VFM52_02840"
     CDS             3154..>3377
                     /locus_tag="VFM52_02840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011037559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle-docking protein
                     FtsY"
                     /protein_id="HET8764133.1"
                     /translation="MLSFWKKKPAEPPASAAPQDAAPAPSPVTPAARRGWRERLAGSA
                     LGRGLGALFQHNPKLDDDLLDELETALITA"
BASE COUNT          526 a         1145 c         1161 g          545 t
ORIGIN      
        1 gcgttcgccg tgctgccgag caggccgtac acgttcggct tgttcggcac cagcgcgaaa
       61 tcgtccatct cgtcgttgag cagcacgccg gtgcccttgg cgacgaaggt ggagcccagg
      121 atgtagttca cggtggacgt gatgcccacc atgttgccgt ccttgtcgat gatggagaaa
      181 tgcgtggtgt gctggcccgg ttcgtggatc gactcgtgcg gcagcatgtc cgacggcgtc
      241 gcgcgatcct tgaggatgct ctggcgcagg ccgtcggcgt aatacggcga cagcagcatc
      301 gccagcggca tctgcacgaa gtccgggtcg ccgaggtaat cgttgtggtc gcggtaggcg
      361 cggcgcatcg cctcgatctc gtaatgcgcg cgctcggcct tgcccatccc ggtcaggtcg
      421 tagccgcgca ggatgttgag catctccgcg atcgccacgc cgcccgagga cggcggcggc
      481 gcggtgacaa tgtgatagcc ctggtagtcg acggtgatcg gcgtgcgctc cttcgcgcgg
      541 tagtttgcca ggtcggccag cgtccagttg ccgcccgccg cacgcacggc atcgaccagc
      601 ttcttcgcgg tttcgccctg gtagaacccg gcgttgccgt gcttcgcgat gagttcgagc
      661 gtgcttgcct gcccggggtc gcgccagatt tccccggcca ccggcggctt gccaccaggc
      721 aggaatttcg ctgccgaggc cggccagcgg gtgaggttct tctgctcgtc ggcaatcgaa
      781 cgcagcagcc gcggggaggg cttgaaaccg tcgcgcgcca gcttgatggc aggcgccagc
      841 gattcggcca gcggcaactt gccgtagcgt tcggccagca gcaccaaccc ggccggctca
      901 cccggaatac cggcggacag cggacccttc agcgccgtgt cgcggttcgg cgtgccgtcg
      961 ggattcaagt aatccttggg gttcaccgcc atcggcgcgg tttcgcgcgc atcgatgaac
     1021 acgttgcggt tgtccttggc gagatgcagc gtggccatga agccgccgcc gatgccggag
     1081 ctttccggct cgacgacgga caacgccgcc gccaccgcca ccgccgcgtc gaacgcgttg
     1141 ccgcccttcg ccagcacggc gaagcccgca tcggtggcgt agttgctggc gctggcgatg
     1201 ccggcatgac cgggggccga tgccggcggc ggcgcagccg gctcggccgc ccacgcggca
     1261 ccaccggcaa gcaggaagcc gcacagcagg gcgcggacat gcagggagaa gttcatgtgg
     1321 cgtacctctc gcccgtcaaa cggacgcacg tgatggcaaa tggcgcccgc ccctgggcag
     1381 gcgccggcgg agcggcaaat ccgctccgcc acaggccaac ttacatctgg acgaagcggt
     1441 aggtggcgcc ggtcgtcttg atcgcgtcac ccacgcgctg ctcgtcggcc ttgtcgccga
     1501 tgaacagcac gatcaccccc ttgaacgagc cggcctgcgc gtccttgaac gctgcggcca
     1561 cgaggtcggc cgtggtcgcc gacaccgggc cggcaaacgc cagcaggttg cccggggtga
     1621 cgccgcgcgc cacggtgtct tccacgttcg acagctggcg gtcgttcatc gccttgtcgt
     1681 cgtcggtctg gcccggcgtg atgaagtaca catacggctg ctgcgccgcc atgccctgca
     1741 ggttcttctg gatgatcggg ccgagatagg cctgccagcc cttggtgtcg ttgacgctgg
     1801 tcggcttcgt cggagcggcg gcttgttgcg tggacgcctg atcctcttcc ggggcctgct
     1861 tggagcagcc gccgagcgcg aggccggcag tcagcgcgat ggcagcgacg aaaacgaact
     1921 tacgcatggt ggtcaccttc tgtttcgggt ttggagtagc cgccagcgcg gccggtatgc
     1981 cagcgctgac gcatggcctg ttgcaccgcc ggatgcacga aactggagat gtcgccgcca
     2041 aggcggccga tctcgcgcac cagcgaagag gaaatgaagc tgtattgttc cgccggcgtc
     2101 aggaacagcg tctccacctg cgggatcagg tgccggttca tgctcgccag ctggaattcg
     2161 tattcgaagt cggacaccgc gcgcagcccg cgcaacagca cgccggcacc gacctcggtg
     2221 acgaaatcgg cgagcaggca atcgaagccg cgcacctcga cgttgcgcag gtcggccaat
     2281 gccagccgcg ccagcgtgat gcggtcggcc aggctgaacg ccgggttctt gctggaactc
     2341 tcggccaccg ccaccaccac gcggtcgaac agtggcgccg cgcgcgacac caggtcggcg
     2401 tggccgttgg tgatcggatc gaacgtgcct ggataaacgg ccagacgggg attgccgggg
     2461 gttgtgttca caggcgagtg gcgcggtgaa atgtcggtct agcttagcag ggtgggaatc
     2521 gccggctcgc gccggtacaa ggcgtagcgc acctcgcccg cctgcccttc acggtgcggc
     2581 acccagtttg cgggcagcac cggcgcggcc gcacgtgggc attccacgta gatccatgcc
     2641 cgggtggcca gccagccggc ttcgagcgcg cgcgccagct ccccccacag gccgagggca
     2701 aacggcggat cgaggaaggc gatgtcgccc gcttgtggcg tgccgcgcag gaatgcctgc
     2761 gcgctgcccg cgaacacttc gccaccgtcc gccctgagcc gtaccagatt cgcccgcaag
     2821 gcgtcggcag cgcgcgcatc cggctcgacg aaacgcacgt gcgcggcgcc acgcgacagt
     2881 gcctcgatgc cgagtgcccc ggtgccggcg cacagatcga gcacgttggc gccggcgatc
     2941 accggcgcca gccagttgaa caaggtctcg cgcacgcgct ccggcgtcgg ccgcaggccg
     3001 ggcagcccag gcaccgccag gcgtgaattg cgcaggctgc cgccgatgat gcgtacccgg
     3061 cccggatgac cgctcatggc gccgatttcg gctcaggggc cggtacatat gagggtgtta
     3121 gcatgccgcc attgtctttg aatcggctcc gcgatgctca gtttctggaa gaaaaagccc
     3181 gccgaaccgc cggcgtccgc ggccccgcag gatgcggcgc cggcgccctc ccccgtcacc
     3241 ccggcggcac ggcgcggctg gcgcgaacgg cttgccggca gcgcattggg gcgcggactc
     3301 ggtgccctgt tccagcacaa cccgaagctt gacgacgacc tgctcgacga gctggaaacc
     3361 gccctgatca ccgccga
//
LOCUS       DASSVL010000167         3197 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_780919, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000167 DASSVL010000000
VERSION     DASSVL010000167.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3197)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3197)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3197
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_780919"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(41..370)
                     /gene="fliE"
                     /locus_tag="VFM52_02845"
     CDS             complement(41..370)
                     /gene="fliE"
                     /locus_tag="VFM52_02845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015448504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-basal body complex protein FliE"
                     /protein_id="HET8764134.1"
                     /translation="MSAIDITNLLNQMHQMKVQTRFPETAAGAPVAAGGQSDFATLFQ
                     RSLAAVGNQQMEAGQLAASFERGDPGADLGRTMIAVQKADLSLRTAVAVQSKLVDAYN
                     AVMNMSV"
     gene            complement(480..1916)
                     /locus_tag="VFM52_02850"
     CDS             complement(480..1916)
                     /locus_tag="VFM52_02850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007511359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54-dependent Fis family transcriptional
                     regulator"
                     /protein_id="HET8764135.1"
                     /translation="MQKYDFLVIESDPARAEAVCSALYFLGYRPQLAATCGEVTEETH
                     AWRAVYVGGAASEAELERRMALLGDAAKQVPLVVAEDSAWRERFVKASSAFATRMATL
                     AFPLRYARLAETLRNLYAHLLGGRSAALRFVGNSTPMLQVNTLIRQVAPFDSSVLVLG
                     ESGTGKEMVARSIHEHSPRRDKPFVAINCGAIPADLLESELFGHEKGAFTGAIAARKG
                     RFELAEGGTLFLDEIGDMSLPMQVKLLRVLQERVYERVGGSKTQRCDVRIIAATHRNL
                     ERAIDEGKFREDLYYRLSVFPLELPGLRERLEDLPVLIDEFNQRLARRGLGTVRFSTS
                     ALHALAGYAWPGNVRELANLVERMAILCPHAEVRASELPAKYRGAHGAEDSQGAGLIA
                     LMNNATPAPAASVQVVPPASAAAHLLPEEGIDLKDHLADVEVGLIRQALDVSGGVVAH
                     AARLLHVQRTTLVEKLRKYGLQASGIAA"
     gene            complement(2274..2828)
                     /locus_tag="VFM52_02855"
     CDS             complement(2274..2828)
                     /locus_tag="VFM52_02855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007080084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilZ domain-containing protein"
                     /protein_id="HET8764136.1"
                     /translation="MNTDAWDEFEQCLASEESLHADSEPLAWPPSPERLQQLADRNAT
                     ALTTLATLEERRADSGDDDNPLLQEMRRMDAKLTALVDIVNQLLAPAATLPPRRVVRF
                     NAVGAIVPQALVPPGDGLLLRLRFDACLSLPLELAGQVRRDLGDGRMFVAFALPGDAT
                     GDAIGRLVFRHHRRKVADTRQQTI"
     gene            complement(2996..>3197)
                     /locus_tag="VFM52_02860"
     CDS             complement(2996..>3197)
                     /locus_tag="VFM52_02860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8764137.1"
                     /translation="AIAACIRLVARLRAHLDAGGAPAIAARLAPLCDDARRDLQRASL
                     HNDASLIDRVVQGFDAVRNGLD"
BASE COUNT          467 a         1126 c         1110 g          494 t
ORIGIN      
        1 ccatgcgagt gctcggcggt cagtgacgga ggggccggcg tcagaccgac atgttcatga
       61 cggcgttgta ggcgtcgacc agcttgcttt gcacggcgac cgccgtgcgc agcgagaggt
      121 cggccttctg caccgcgatc atcgtgcggc cgagatcggc gccggggtcg ccgcgctcga
      181 agctcgccgc gagctgcccg gcttccatct gctggttgcc gacggctgcc agcgagcgct
      241 ggaacagcgt ggcgaaatcc gactggccgc cggccgccac cggcgcaccg gccgcggttt
      301 ccggaaagcg cgtctgcacc ttcatctggt gcatctggtt cagcaggttg gtgatgtcga
      361 tcgcgctcat gacgtctgtc cgtgcggagg gggtggcgac gggaacccgt cgcgtgacgg
      421 ttcccagtgc cttcaatgca cgagccgtgc cacgcgccgg cgcggcgtgg caagcggcgt
      481 caggcggcga tgccggacgc ctgcaggccg tacttgcgca gcttttccac cagcgtggtg
      541 cgctgcacgt ggagcaggcg cgcggcgtgc gccaccaccc cgccgctgac gtcgagcgcc
      601 tggcggatca gccccacctc gacgtcggcc aggtgatcct tgagatcgat gccttcttcc
      661 ggcagcaggt gcgcggccgc actggccggc ggcaccacct gcacgctggc cgccggtgcc
      721 ggcgtggcgt tgttcatcag cgcgatcagg ccggcgccct gcgaatcctc cgcgccgtgc
      781 gcgccgcggt acttcgccgg cagctcgctg gcgcgcacct cggcgtgcgg gcacaggatg
      841 gccatgcgct cgaccaggtt tgccagctcg cgcacgttgc ccggccaggc gtacccggcc
      901 agcgcgtgca gcgcgctggt gctgaagcgc acggtgccga ggccgcgccg ggccaggcgt
      961 tggttgaact cgtcgatcag caccggcagg tcttccagcc gttcgcgcag gcccggcagt
     1021 tccagcggaa acaccgacag ccggtagtac aggtcctcgc ggaacttgcc ctcgtcgatc
     1081 gcgcgctcga ggttgcggtg ggtcgcggcg atgatgcgca cgtcgcagcg ctgggtcttg
     1141 ctgccgccga cgcgctcgta gacgcgctcc tgcagcacgc gcaggagctt cacctgcatc
     1201 ggcaggctca tgtcgccgat ctcgtcgagg aacagcgtgc cgccctcggc cagctcgaag
     1261 cggcccttgc gtgcggcgat ggcgccggtg aacgcgccct tctcgtggcc gaacagttcg
     1321 ctttccagaa ggtcagccgg aatcgcgccg cagttgatcg ccacgaacgg cttgtcgcgt
     1381 cgcggcgagt gctcgtggat gctgcgcgcg accatttcct tgccggtgcc cgactcgccg
     1441 agcaccagca cgctggagtc gaacggcgcg acctggcgga tcagggtgtt gacctgcagc
     1501 atcggggtcg aattgccgac gaagcgcagc gccgccgagc ggccgcccag gaggtgcgca
     1561 tacaggttgc gcaaggtctc cgcgaggcgc gcgtagcgca gcggaaacgc cagcgtggcc
     1621 atccgcgtcg caaacgccga cgacgccttg acgaagcgct cgcgccacgc ggaatcctcg
     1681 gccaccacca gcggcacctg cttcgcggca tcgcccagca gcgccatccg gcgttcgagt
     1741 tcggcctcgc tcgccgcgcc gccgacgtac accgcgcgcc atgcgtgggt ttcctcggtc
     1801 acttccccgc acgtcgctgc aagctgcggc cggtagccga ggaagtacag cgcggagcac
     1861 accgcctcgg cgcgtgccgg gtcggactcg atgaccagga aatcgtattt ctgcattgcc
     1921 actctcccat cgtgtcgcaa gcttccccgc gtcccgcggt gccgcctttt gttggttgtc
     1981 ggtgtgcgcc cggcggtgat ggccggcgcg ctgaacgctt gtgcaacatg ggggccagca
     2041 acggttggtt gacgcgccgc gaaaacgtcg cacggcggaa aaatcacccc tgccggatcc
     2101 gcggctggca ccgcgccggc gatcacaagt ggctgaaacg aaacacttcc ggcgcgcgcc
     2161 ggaaggctgc cgggggcatt gccgccaccg cgtgccaaca ccgacaaaaa gtcgtaccaa
     2221 aggtggaaac cgtgcgctcg atcacacgta aagtgtgatg gcgtcgacgt gacctaaatg
     2281 gtctgttgac gggtgtctgc cactttgcgt cgatggtggc gaaacaccag gcgaccaatc
     2341 gcgtcacccg tcgcgtcacc cggcaatgcg aacgccacga acatgcggcc atcgcccagg
     2401 tcgcggcgga cttgccccgc aagttccagc ggcaggctca ggcaggcgtc gaagcgcagc
     2461 cgcagcagca ggccgtctcc cggcggcacc agcgcctgcg gcacgatggc gcccaccgcg
     2521 ttgaagcgca ccacgcgccg cggcggcagc gtggccgccg gggccaggag ctggttcacg
     2581 atgtcgacca gcgcagtgag cttggcgtcc atgcgccgca tctcctgcag cagcggattg
     2641 tcgtcgtcgc cgctgtcggc acggcgctct tccagcgtcg ccagcgtggt gagcgcggtg
     2701 gcgttgcggt cggccagttg ctgcaggcgt tcgggcgacg gcggccacgc cagcggctcg
     2761 ctgtcggcat gcagcgattc ctcgctggcc aggcactgct cgaactcgtc ccatgcatcg
     2821 gtgttcatcg gcattccggc agtcagggcg cgtggcgcgg atggttgcga ccccgcggcc
     2881 gcgcggtcaa gcgcggcacc gggagagccc ggacgacggc aggcatccgg gccgcgccgc
     2941 ccgccatgcg gtgcggcttc ccgcctcgga tacttccatc accccgaccc gcagctcaat
     3001 ccagcccgtt gcgcacggca tcgaagccct gcaccacgcg gtcgatcagg ctggcgtcgt
     3061 tgtgcaggct cgcacgctgc aggtcgcgcc gcgcgtcgtc gcacagcggt gccagacgcg
     3121 ccgcgatggc cggtgcgccg ccggcatcca ggtgcgcgcg caggcgggcc accagacgga
     3181 tgcatgcggc gatcgcc
//
LOCUS       DASSVL010000168         4747 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_201487, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000168 DASSVL010000000
VERSION     DASSVL010000168.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 4747)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4747)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4747
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_201487"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..278)
                     /locus_tag="VFM52_02865"
     CDS             complement(<1..278)
                     /locus_tag="VFM52_02865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019464396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-basal body complex protein"
                     /protein_id="HET8764138.1"
                     /translation="MDHSIYIAMTGASQIMRAQDVVSHNLANASTVGFKSELDAFQNL
                     PVLGQGMPSRINAVAQSLGYDATSGSLQQTGRALDVAIRGDGWIAVQAP"
     gene            complement(295..1515)
                     /gene="flgE"
                     /locus_tag="VFM52_02870"
     CDS             complement(295..1515)
                     /gene="flgE"
                     /locus_tag="VFM52_02870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019464397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook protein FlgE"
                     /protein_id="HET8764139.1"
                     /translation="MALNQALSGIKGAQSDLNVIANNIANANTTGFKGSRAEFADIYA
                     YTGINLGATTVGSGTRMTDVAQQFAQGDIQTTGNSLDLAISGNGFFVVNTGNGYAYTR
                     AGAFHQDPSGNVINQDNAALQIYPYSATSGTFDTSTLTDLNLVTAQSTAKPSTTAVVS
                     SNLPADATAPVLPFDTTNPATFNQSSTFTVYDSLGSSHQATAYYVKTGSNTWNVNLYV
                     DGQSAGTQALAFNSTGGLSTPANGVVSFNALNYANGSNPQTLSINFAKTTQYGTGYAA
                     GTISQDGYTAGALSSIDIDSAGIVTANYSNGQSSKLGQLAMANFQNLQGLRQLGAASW
                     MASTESGTAVMGTAASGQYGTIQSGSLEESNTSDTTEQLVDMIKAQRDYQANAQVLST
                     DNTLASTLFNAVSR"
     gene            complement(1546..2229)
                     /locus_tag="VFM52_02875"
     CDS             complement(1546..2229)
                     /locus_tag="VFM52_02875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017461994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook capping FlgD N-terminal
                     domain-containing protein"
                     /protein_id="HET8764140.1"
                     /translation="MTTNAIGPVPAAAPAPASASASVGAALGNSMNQADFLKLLTTQL
                     QTQDPTKPMDNTQFVSQLAQFSQLASTQDLNASVNNLSGQITSSLQSSQVLGSVGLVG
                     RRVLVPAGTLSYAGSAMSGAVGIGTAVANARVAITNGAGKVVRTLDLGPQQAGLANFS
                     WDGMDANGNPLPPGQYGVSAADPQGNPLTTYVSGNVTGVGYGGASVGTYVQVNGVGGV
                     PLTTIAQIN"
     gene            complement(2241..2666)
                     /gene="flgC"
                     /locus_tag="VFM52_02880"
     CDS             complement(2241..2666)
                     /gene="flgC"
                     /locus_tag="VFM52_02880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003441056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009425 - bacterial-type flagellum basal
                     body [Evidence IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body rod protein FlgC"
                     /protein_id="HET8764141.1"
                     /translation="MSLYSIFNVAGTGMAAQSLRLNTVASNLANAESVATTPETAYRA
                     REPVFAAIHRQQLGGDRNADATQGVQVLGVSESQADVPARYEPGNPLANAEGYVYGSN
                     VNPVDELVNMISASRSYQNNVEVMNSAKQLLLQTLNLGK"
     gene            complement(2666..3079)
                     /gene="flgB"
                     /locus_tag="VFM52_02885"
     CDS             complement(2666..3079)
                     /gene="flgB"
                     /locus_tag="VFM52_02885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008434144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009429 - bacterial-type flagellum basal
                     body, proximal rod [Evidence IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body rod protein FlgB"
                     /protein_id="HET8764142.1"
                     /translation="MNALPENLFGIHTQALALWQRRADVLANNLANADTPGYLARDVD
                     FRKALQAASGMATGTLPLEAPDAGQIGSGSGTTPATAPLAYRVPSQPTMDGNTVDTQV
                     EQADFAGNTVHYQASLSFITAQISMLRTAITGGQG"
     gene            complement(3249..4181)
                     /locus_tag="VFM52_02890"
     CDS             complement(3249..4181)
                     /locus_tag="VFM52_02890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007511394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein"
                     /protein_id="HET8764143.1"
                     /translation="MGNSLLERVEQHTRLAGHNRVAMLLFRLGDAQLFGINVFKVREV
                     MRRPPLERMLGVHELLAGSCDYRGQTIPVIDLAAALGYPPLREVESAHLMVTEFSGSV
                     QGFLVADLQRMVQVDGEQMAAPPTALGFGNKVNAVSRIDGALLAVVDVEQVLAGIDSA
                     PADLSLQMQRLAETRAMKPRRVLVADDSLVARRRLVALFKQMSIECVVAKDGEEALAK
                     LHQLAAGSPDEGVRLVVSDIEMPRLDGYALTRAIREDAQLRALKVVLHSSLSGGFNTS
                     MVKEVGADAFVAKFQPDLLAQAVFELLPAEPAPA"
     gene            4401..>4747
                     /locus_tag="VFM52_02895"
     CDS             4401..>4747
                     /locus_tag="VFM52_02895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015448521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein"
                     /protein_id="HET8764144.1"
                     /translation="MILIWNQHLAALVAAAAAGRDAEVASLRRQDPRAAQVLAPLLAR
                     VAARQPAAVALQSIEQQSLVLGAVQRLAGEQDALDKAATESRASVDHLTAGSAGISTA
                     LAAVDAQLQQAAGT"
BASE COUNT          641 a         1563 c         1722 g          821 t
ORIGIN      
        1 ggcgcctgca cggcgatcca gccgtcgccg cggatcgcca cgtccagcgc gcggccggtc
       61 tgctgtaggc tgcccgaggt ggcgtcgtag ccgaggcttt gcgccaccgc gttgatccgg
      121 ctgggcatgc cctgccccag cacgggcagg ttctggaagg cgtccagctc gctcttgaag
      181 ccgaccgtgg acgcattggc caggttgtga ctcaccacgt cctgggcgcg catgatctgc
      241 gaggccccgg tcatggcgat gtagatggaa tggtccatgg tcggctacct gcggtcagcg
      301 cgagacggcg ttgaacaggg tggaggccag cgtgttgtcg gtggaaagca cctgcgcgtt
      361 ggcctggtag tcgcgctgcg ccttgatcat gtccaccagc tgctcggtgg tgtccgaggt
      421 gttggactcc tccagcgagc cggactggat ggtgccgtac tggccgctgg ccgccgtgcc
      481 catcaccgcg gtgccggatt cggtgctcgc catccagctc gccgcgccga gctggcgcag
      541 gccctgcagg ttctggaagt tcgccatcgc cagctggccg agcttgctgc tctggccgtt
      601 ggaataattc gcggtgacga tgccggcgct gtcgatgtcg atcgaggaca acgcgccggc
      661 ggtgtagccg tcctggctga tggtgccggc ggcgtagccg gtgccgtact gggtggtctt
      721 ggcgaagttg atcgacagcg tctgcgggtt cgagccgttc gcgtaattga gcgcgttgaa
      781 gctgacgacg ccgttggccg gcgtgctcag cccgccggtg gagttgaagg ccagcgcctg
      841 ggtgccggca ctctggccgt cgacgtagag gttcacgttc cacgtgttcg agccggtctt
      901 gacgtagtac gccgtcgcct ggtgcgagga gcccaggctg tcgtacacgg tgaacgtcga
      961 cgactggttg aaggtggccg ggttggtggt gtcgaacggc agcaccggcg cggtcgcgtc
     1021 cgccggcagg ttcgacgaca ccaccgcggt ggtgctcggc ttggccgtgc tctgcgcggt
     1081 gaccaggttc aggtcggtca gcgtgctggt gtcgaaggtg ccgctggtgg cgctgtacgg
     1141 gtagatctgc agcgcggcgt tgtcctggtt gatgacgttg cccgacgggt cctggtggaa
     1201 cgcgccggca cgggtgtagg cgtagccgtt gccggtgttc accacgaaga agccgttgcc
     1261 gctgatcgcc aggtcgaggc tgttgccggt ggtctggatg tcgccctgcg cgaactgctg
     1321 ggcgacgtcg gtcatccgcg tgccgctgcc gaccgtggtc gcgccgaggt tgatgccggt
     1381 gtaggcgtag atgtcggcga actcggcacg cgaccccttg aagccggtgg tgttcgcgtt
     1441 ggcgatgttg ttggcgatca cgttgagatc ggactgcgca cccttgatgc cgctgagcgc
     1501 ttgattgaga gccatggatg aatcctcggt tgcggtggag tgcgatcagt tgatctgcgc
     1561 gatggtggtg agcggcacgc cgcccacgcc gttgacctgc acgtaggtgc ccacgctggc
     1621 gccgccgtaa ccgaccccgg tgacgttgcc gctgacgtag gtggtgagcg gattgccctg
     1681 ggggtcggcg gcgctgaccc cgtactgtcc cggcggcaag ggattgccgt tcgcgtccat
     1741 gccgtcccag ctgaaattcg ccagcccggc ctgctgcggg ccgaggtcga gcgtgcgcac
     1801 gaccttgccg gcgccgttgg tgatggccac ccgcgcgttg gccaccgcgg tgccgatgcc
     1861 gaccgcgccg gacatcgcgc tgccggcgta gctgagcgtg ccggccggca ccagcacccg
     1921 gcggccgacc agcccgaccg agccgagcac ctgcgaggac tgcagcgagc tggtgatctg
     1981 gccggagagg ttgttgaccg aggcgttgag atcctgcgtc gaggcgagct ggctgaactg
     2041 cgccagctgc gacacgaact gggtgttgtc catcggcttg gtcgggtcct gggtctgcag
     2101 ctgggtggtc agcagcttga ggaaatccgc ctggttcatg ctgttgccga gcgccgcgcc
     2161 gacgctggcg gaagccgatg ccggcgcggg ggccgctgcc gggacggggc cgattgcatt
     2221 ggtagtcatc gcattgcctc tcacttgccg aggttcaggg tctgcagcag cagttgcttg
     2281 gcgctgttca tgacctcgac gttgttctgg taggagcgcg acgcggagat catgttgacc
     2341 agctcgtcga ccgggttgac gttggagccg tacacgtagc cctccgcgtt ggcgagcggg
     2401 ttgcccggct cgtagcgcgc cggcacgtcg gcctggcttt cgctgacgcc gagcacctgc
     2461 acgccctggg tcgcgtccgc attgcggtcg ccgccgagct gctggcggtg gatcgcggca
     2521 aacaccggct cgcgggcgcg gtaggccgtc tccggcgtgg tcgccacgct ttcggcgttg
     2581 gcgaggttgc tggcgacggt gttgagccgc agcgactgcg cggccatgcc ggtgccggcg
     2641 acgttgaaga tcgaatagag cgacatcagc cctgccctcc ggtgatggcg gtgcgcagca
     2701 tgctgatctg cgcggtgatg aacgacaggc tggcctggta gtgcaccgtg ttgccggcga
     2761 agtcggcctg ctccacctgg gtgtcgacgg tgttgccgtc catcgtcggc tggctcggca
     2821 cgcggtaggc aagcggcgcg gtcgccggtg tcgtcccgga accgctgccg atctggccgg
     2881 cgtccggcgc ctccagcggc agcgtgccgg tggccatgcc gctggccgcc tgcaatgcct
     2941 tgcggaaatc gacgtcgcgc gcgaggtacc ccggcgtgtc ggcgttggcg aggttgttgg
     3001 ccagcacgtc ggcgcggcgc tgccaaagcg ccagcgcctg ggtgtggatg ccgaacaggt
     3061 tttcaggcag ggcgttcatc gttgactccg cgtgcggttg ccgcacggaa gccaaaggca
     3121 agttgcatgc cacgcccggc aaaccgttgc ggcgcatggg ccggcagcgg tcgcatcgca
     3181 gccgcgcaat ggcggccggt gacggaagtc ggattgttga cgcggctacg ggacgcgccg
     3241 gatcggcgtc aagctggcgc cggttccgcc ggcagcagct cgaacaccgc ctgcgccagc
     3301 agatcgggct ggaacttggc gacgaaggcg tcggcgccca cctctttcac catcgaggtg
     3361 ttgaagccgc cggacagcga gctgtgcagc accaccttga gggcgcgcag ctgcgcgtcc
     3421 tcgcggatcg cgcgggtcag cgcatagccg tccaggcgcg gcatctcgat gtcggagacg
     3481 accaggcgca cgccttcgtc cgggctgccg gccgccagct ggtgcagctt cgccagcgct
     3541 tcctcgccgt ccttcgccac cacgcactcg atgctcatct gcttgaacag cgcgaccagc
     3601 cgccgccgcg cgaccagcga atcgtccgcc accagcaccc ggcgcggctt catcgcgcgg
     3661 gtttccgcca gccgctgcat ctgcagcgac aggtcggccg gcgcggagtc gatgccggcg
     3721 agtacctgtt ccacgtccac caccgccagc agcgcaccgt cgatgcggct caccgcgttc
     3781 accttgttgc cgaagccgag cgcggtcggc ggcgccgcca tctgctcgcc atccacctgc
     3841 accatgcgct gcaggtcggc gaccaggaag ccctgcacgc tgccgctgaa ctcggtcacc
     3901 atcaggtgcg ccgattccac ctcgcgcagc ggcgggtagc cgagcgcggc ggccaggtcg
     3961 atcaccggga tggtctgccc gcggtagtcg cagctgccgg ccagcagctc gtgcacgccc
     4021 agcatgcgtt ccagcggcgg gcgccgcatc acctcgcgca ccttgaacac gttgatgccg
     4081 aacagctgcg catcgccgag ccggaacagc agcatcgcca cgcgattgtg tccggccagc
     4141 cgcgtgtgtt gctcgacgcg ttccagcagc gagttgccca tcggttccac ctcggattgc
     4201 ggtggcgccg gcgtggcacc acgcgaacgc tatcggcctt gcctccggcg gcttgagcgg
     4261 cgccgggccg cggcgggtgc cggcgtgcgc ggccgaggcg accgctggca tgtggcttgc
     4321 tttctcaagc ttcgtgaaat ccggacgatg cagtcacggc aggcgcgcca cgcgtcccaa
     4381 cccaaggtga tgtgccactc atgatcctga tctggaacca gcatctcgcc gcgctggtgg
     4441 cagcggccgc agccggccgc gacgccgaag tcgccagcct gcggcgccag gacccgcgtg
     4501 ccgcgcaggt gctggcgccg ttgctggcgc gcgtcgccgc gcgccagccg gccgccgtcg
     4561 cgctgcagag catcgagcag cagagcctgg tgctcggcgc ggtgcagcgc ctcgccggcg
     4621 agcaggacgc gctcgacaag gccgcgaccg aaagccgcgc cagcgtcgat cacttgacgg
     4681 ccggcagcgc cgggatctcg acggcgctgg ccgcggtcga cgcccagctg cagcaggccg
     4741 ccggcac
//
LOCUS       DASSVL010000169         3728 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_696131, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000169 DASSVL010000000
VERSION     DASSVL010000169.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3728)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3728)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3728
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_696131"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..302
                     /locus_tag="VFM52_02900"
     CDS             <1..302
                     /locus_tag="VFM52_02900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8764145.1"
                     /translation="LSRAGRRVGELLARAMQGVDPGAPGAFWKIVANLMAMVPWTTLF
                     WWNLAFVAVGAVLGWWRGRFWAGVLWAWILGPVGWCVFLVRMRTRAVPPPLPRQR"
     gene            354..833
                     /locus_tag="VFM52_02905"
     CDS             354..833
                     /locus_tag="VFM52_02905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008207736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional repressor"
                     /protein_id="HET8764146.1"
                     /translation="MHNAAIDTHLHTHHHDAKGFVREVEHVSEARGLRLTPLRMEVLE
                     LIAAATKPVKAYDLLDQLREKHGNAAPPTVYRALDFLLEQRFIHKLESINAYVSCHHP
                     AQAHQVPFLICDVCASAEEVCDPRVAELIDAQAQALGFQALAQTLEVHGVCKRCRRR"
     gene            879..1352
                     /locus_tag="VFM52_02910"
     CDS             879..1352
                     /locus_tag="VFM52_02910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017460429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MerC domain-containing protein"
                     /protein_id="HET8764147.1"
                     /translation="MDRCQSGATAPGVFAEVVAPIPEAPGHRTRWWDTADRVGATASF
                     LCAIHCALLPFVLTLLPLLGLGFLASHRFERWFVVFAAALALIALVSGYRRHRHAMPL
                     RLAMPGLVLLLLGVTWAEVYPLVLHATLVTCGGLLLASAHFVNLWIDRRPGHCAH"
     gene            1475..2356
                     /locus_tag="VFM52_02915"
     CDS             1475..2356
                     /locus_tag="VFM52_02915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008207740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation diffusion facilitator family transporter"
                     /protein_id="HET8764148.1"
                     /translation="MHPGVRGRKLLIAFLLTTAMMLAEIVGGLWSGSLALLTDGGHMM
                     VDALALLMAFVGARMALRPADAKRSYGYGRMEVLVGFVNALSQFVLVAWVAWEAASRL
                     LHPEEILSGIMLVVALIGLVVNVLVLRSLHAHAHDDMNAAGASLHVLGDLLGSVAAVV
                     AALLIRVFGWVWADPALSILVAMLILASAWRLLRRSAHILLEGVPEGLDSAAIEAALR
                     VADPAIRDIHHLHVWQLASGSRMATLHAKLVDPTKGARVLRAINDLLLERFDIRHVTV
                     QIDPGSCADRDGHCTHE"
     gene            2437..2598
                     /locus_tag="VFM52_02920"
     CDS             2437..2598
                     /locus_tag="VFM52_02920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015447337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein THX"
                     /protein_id="HET8764149.1"
                     /translation="MGKGDRKTRRGKTYRGSYGNKRAHAVRPAVAGAKPTVVKPTAAK
                     KAAPKKKSA"
     gene            2757..3092
                     /locus_tag="VFM52_02925"
     CDS             2757..3092
                     /locus_tag="VFM52_02925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019466660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YerC/YecD family TrpR-related protein"
                     /protein_id="HET8764150.1"
                     /translation="MKRRSLDPETPIEDAERGLCEVLLSLKGVDEMDAFLRDLCTPSE
                     LEVLVDRWRVVPHLLDGLAYREIHERTAVSITTIGRVARFLNQGNGGYLAAAARASRR
                     RAAANKVRP"
     gene            3089..>3728
                     /gene="hisG"
                     /locus_tag="VFM52_02930"
     CDS             3089..>3728
                     /gene="hisG"
                     /locus_tag="VFM52_02930"
                     /EC_number="2.4.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015447339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003879 - ATP phosphoribosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase"
                     /protein_id="HET8764151.1"
                     /translation="MKPRDRLRVAMQKSGRLTEPALELLRRCGLSFRQSRDKLFCFGE
                     SEPVDLLLVRDDDIPGLIAQGVCDVGIVGRNVLDEFRLTAGVDQPGLAELRALGFGRC
                     RLSIAVPQESDYRDPAQLAGLRIATSYPGLLGAWLRERGIEAGVVTLAGSVEIAPKLG
                     TADLICDLVQSGATLVANQLREADVLLESEAVLAGPAELPADERGDLLALLLK"
BASE COUNT          522 a         1204 c         1330 g          672 t
ORIGIN      
        1 ggctgagccg ggcggggcgt cgcgtgggtg agctgctggc tcgcgcgatg cagggcgtcg
       61 atccgggtgc gccgggcgcg ttctggaaga tcgtcgccaa cctcatggcc atggtgccgt
      121 ggacgacgct gttctggtgg aacctcgcgt ttgttgcggt gggtgcggtg ctcggctggt
      181 ggcgcggtcg gttctgggcg ggcgtgctct gggcgtggat actcgggccg gtaggctggt
      241 gcgtgttcct ggtgcgcatg cggacacgcg ccgttccgcc gccgttgccg cgccagcgtt
      301 gactccgccg cgacgcgacg cggcgggtat gatcgatcgg ggaggatacc cagatgcaca
      361 acgctgccat cgacacccac ctgcacacgc accaccacga tgcgaagggt ttcgtgcgcg
      421 aggtggaaca cgtcagtgaa gcgcgtggcc tgcgcctgac gccgctgcgc atggaagtgc
      481 tggagctgat cgccgcggcc accaagccgg tgaaggccta cgacctgctc gaccagctgc
      541 gcgagaagca cggcaacgcg gcgccgccca cggtgtatcg ggcgctggat ttcctgctcg
      601 agcagcgctt catccacaag ctcgaatcga tcaacgccta cgtgtcctgc caccacccgg
      661 cgcaggcaca ccaggtgccg ttcctgatct gcgacgtgtg tgcgagtgcg gaagaggtgt
      721 gcgacccgcg cgtggccgaa ttgatcgacg cgcaggccca ggcgctgggt ttccaggcgc
      781 tggcgcaaac cctggaagtg cacggcgtgt gcaagcgctg ccgccggcgt tgagcgtggt
      841 cttgcgggcg tggactgtta caaagtaaca ttgtacccat ggaccgttgc caatccggcg
      901 caaccgctcc cggcgtgttc gccgaggtgg tggcgcccat ccccgaagca cccggccacc
      961 gcacccgctg gtgggatacc gccgaccgcg tgggggcgac ggcatcgttc ctgtgcgcca
     1021 tccactgcgc gttgttgccg ttcgtgctga cgctgctgcc gttgctcggg ctcgggtttc
     1081 tggccagcca ccggttcgaa cgctggttcg tggtgttcgc ggcggcgctg gcgctgatcg
     1141 cgctggtctc cggctatcgc cggcatcggc atgccatgcc gctgcgcctg gccatgccgg
     1201 ggctcgtctt gctgctgctt ggcgtgacct gggcggaggt gtatccgctg gtcctgcacg
     1261 cgacgctggt cacctgcggt ggcctgctgc tggcgtcggc ccatttcgtc aacttgtgga
     1321 tcgatcgccg ccctgggcac tgcgcgcact gagccggtga ttgtgtaacg cggcgggcgg
     1381 tgcctagcat gcggccatgg acgtgaatct tgccgacgac gctgcggccc acgcagcggc
     1441 gtcgcattcc caccatcacg atcacgatca cgccatgcat cccggcgtcc gcggacgcaa
     1501 attgctgatc gcgttcctgc tgaccacggc gatgatgctc gccgaaatcg tcggcggcct
     1561 gtggtccggg tcgctggcgc tgctgaccga tggcggccac atgatggtgg acgcgctggc
     1621 cttgctgatg gcgttcgtcg gggcgcgcat ggcgctgcgt ccggccgatg ccaagcgcag
     1681 ctacggctac gggcggatgg aagtgctggt cggcttcgtc aacgcgctca gccagttcgt
     1741 gctggtggcg tgggtcgcct gggaggcggc gagccggctg ctgcatcccg aggaaatcct
     1801 gtccgggatc atgctggtcg tggcgctgat tggcctggtg gtcaacgtgc tggtgttgcg
     1861 cagcctgcac gcgcacgcgc acgacgacat gaatgccgca ggggcctcgc tgcacgtgct
     1921 gggtgatctg cttggctcgg ttgccgcggt cgtggcggca ttgctgatcc gcgtattcgg
     1981 ctgggtctgg gccgacccgg cgctgtcgat cctggttgcc atgctgatcc tcgccagtgc
     2041 atggcggctg ctgcggcgct ccgcgcacat cctgctcgaa ggcgtgcccg aagggttgga
     2101 cagcgccgcg atcgaggccg cgttgcgcgt ggccgacccg gccatccgcg acattcacca
     2161 cctgcatgtc tggcagctcg cctccggctc gcgcatggcc accctgcatg ccaagctggt
     2221 cgatccgacg aaaggcgcgc gggtattgcg tgccatcaac gacttgctgc tggagcgttt
     2281 cgacatccgc cacgtgacgg tgcagatcga tcccggttcg tgcgccgatc gcgacggaca
     2341 ctgtacgcac gagtagtcag gggcctgggc ggcttgctat ggcccgcgtg gcgacgctgg
     2401 tatcatggcg tgccaatacg catcgaggag attttcatgg gcaagggcga tcgcaagacc
     2461 cgtcgtggca agacctaccg cggcagttac ggcaacaagc gcgcgcatgc cgtgcgcccc
     2521 gcggtggccg gtgccaagcc gacggtggtg aagccgacgg ctgcaaagaa agcggcgccg
     2581 aagaagaagt cggcctgatc cggctgctgc aggtgctcga aggaccccgc ctcggcgggg
     2641 tttttttgtg cccaggtccg gcgtttgcgc gctggacagg ctgctcgcgg gcggcgcttg
     2701 cgctgcgccg caacattccg tagaatcccc atccaatgta ttaacgcgtt aacacgatga
     2761 aacggcgatc gctggaccct gagaccccta tcgaagatgc cgagcgcggc ttgtgcgaag
     2821 tgctgctctc gctcaagggc gtcgacgaga tggatgcctt cctgcgcgac ctgtgcacgc
     2881 cgtccgagct ggaggtgctg gtcgatcgct ggcgagtggt gccgcatctg ctggacggcc
     2941 tcgcgtaccg cgaaatccac gagcgcacgg cggtgagcat caccacgatc ggccgcgtcg
     3001 cgcgcttcct caaccagggc aatggcgggt atctcgcggc ggcggcacgc gcctcgcgcc
     3061 gtcgcgccgc cgccaacaag gtacgtccat gaaaccacgc gatcgtttgc gcgttgcgat
     3121 gcagaaatct ggccggctca ccgagccggc gctcgaactg ctgcgccgct gcgggctgag
     3181 tttccgccag agccgcgaca agctgttctg cttcggcgag agcgagcccg tcgacctgct
     3241 gctggtgcgc gacgacgaca tccccggcct gattgcgcag ggcgtgtgcg acgtcggcat
     3301 cgtcgggcgc aacgtgctgg atgaattccg gctcaccgcg ggcgtcgatc aaccggggct
     3361 ggccgagctg cgcgcgctgg gcttcggccg ctgccggctg tcgattgcgg tgccgcagga
     3421 gtcggattac cgcgatcccg cgcaactcgc cggcttgcgc atcgccacct cgtatcccgg
     3481 cctgctcggc gcctggctgc gtgagcgtgg catcgaggcc ggcgtggtga cgctggccgg
     3541 ttcggtggag attgcgccga agctgggcac ggccgatctg atctgcgacc tcgtgcaaag
     3601 cggggcgacg ctggtcgcca accagctccg cgaggccgac gtgctgctgg aaagcgaggc
     3661 ggtgctggcc ggcccggccg agttgccggc ggacgagcgc ggggacctgc tggcgctgct
     3721 gctcaagc
//
LOCUS       DASSVL010000170         2898 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_413311, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000170 DASSVL010000000
VERSION     DASSVL010000170.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2898)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2898)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2898
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_413311"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1358)
                     /locus_tag="VFM52_02935"
     CDS             complement(<1..1358)
                     /locus_tag="VFM52_02935"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HET8764152.1"
                     /translation="MKFTDLFIRRPVLASAISLVILLLGARAWTGMTIREYPTVTSTV
                     VTITTAYPGAGPETVGAFITTPLEQAIASAPGIDYMTATSAPGQSTIIANMRLNFDPN
                     AAVSQILSKVNQVQNVLPAQAQRPIINETVGDPTALMYLSFGGQGMSQQQINDYVLRV
                     VQPKIQGIPGVGQAQIVPAGIDPSGNAFALRAWLDPARMAARGVTPADVSAALQANNV
                     VSAVGSTRNAHEQVTITATTSLNDLAQFKRLIVKHAGNTVIRLADVADVTLGAENYNQ
                     AVFYNGQPAVFIGVQPTPDANALDVADGVHAALKELRANLPPGMHADVALDQSVFIIA
                     SLHEVIFTIAITLAVVVLVIFLFLGSLRSLLLPAVAIPLSVVGAGVVMLALGFTINLL
                     TLLAVVLAIGLVVDDAIIVLENIQRLIDEGEGPLEAAIHGARELASPILVMSTTLVAV
                     FIP"
     gene            complement(1369..2442)
                     /locus_tag="VFM52_02940"
     CDS             complement(1369..2442)
                     /locus_tag="VFM52_02940"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HET8764153.1"
                     /translation="MHKAWLVTGIALVVVFGAIFGTRLYADHRAAAQPHGQPPVAVAT
                     AVAGTATWAPRASVVGSLEAVQGTEITAQIAGNVTAIAFASGARVRQGQLLVRLDDSS
                     QLALLHADAAKLALAQATLERTQTLYAAKASSLSDLQTAQANAGIARAAVEGDRATLA
                     KLHISAPFAGTVGIREVSLGQYVSPGTPVVDLQSWNPLLLDFTVPQSQLPQLKPGSQV
                     SFSADAFPDVHFAGTITAVGARVDPATRNVALQATLENPDGRLRPGLYGHVQLALGTP
                     RHGVVVPHTAIAYSTFGDSVYVVASDAHGKVVHPQVVQVSEERDGQALIASGLDAGAT
                     VVVAGQNKLRDGMPVTVDSTVQR"
     gene            complement(2442..>2898)
                     /locus_tag="VFM52_02945"
     CDS             complement(2442..>2898)
                     /locus_tag="VFM52_02945"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HET8764154.1"
                     /translation="GLFSPASRIWNVAAGLVQPVFEGGTLKAEKQAAEAAYRGVFANY
                     RGAVLGAFRNVADVLRALDHDAGLLDAQTRALRAAQQANDLVAAQYRAGGVDYLSLMT
                     SEMQLENARIAQVKAQAQRYADTTALYVALGGGQWPAATAQAVARQGDQ"
BASE COUNT          408 a          985 c         1047 g          458 t
ORIGIN      
        1 gggatgaaca ccgcgaccag cgtcgtcgac atcacgagga tcgggctggc cagctcgcgt
       61 gcgccgtgga tcgcggcttc gagcgggcct tcgccctcgt cgatcaggcg ctggatgttc
      121 tccagcacga tgatcgcgtc atccaccacc agcccgatcg cgagcacgac cgcgagcagg
      181 gtcagcaggt tgatggtgaa cccgagcgcc agcatgacga cgccggcgcc gaccaccgac
      241 agcgggatcg cgaccgcggg caacaacagc gagcgcagcg agccgaggaa caggaagatc
      301 accagcacca cgacggcgag cgtgatcgcg atggtgaaga tcacctcgtg cagcgaggcg
      361 atgatgaaca cgctctggtc gagcgccacg tccgcgtgca tgccgggcgg caggttcgcg
      421 cgcagctcct tgagcgccgc gtgcacgccg tcggcgacgt cgagcgcgtt cgcgtccggg
      481 gtcggctgca cgccgatgaa cacggcgggc tggccgttgt agaacaccgc ctggttgtag
      541 ttctccgcgc cgagcgtgac gtcggcgaca tcggcgaggc ggatcaccgt gttgccggcg
      601 tgcttcacga tcagccgctt gaactgtgcg aggtcgttga gcgacgtcgt cgcggtgatc
      661 gtcacctgct cgtgcgcgtt gcgcgtggag cccacggcgg acaccacgtt gttcgcctgc
      721 agcgcggcgg acacgtcggc cggggtcacg ccgcgcgccg ccatgcgcgc cggatcgagc
      781 caggcgcgca gcgcaaacgc gttgccgctg gggtcgatgc cggccggcac gatctgcgcc
      841 tggccgacgc cgggaatgcc ctggatcttc ggctgcacca cgcgcagcac gtagtcgttg
      901 atctgctgct ggctcatgcc ctggccgccg aacgacaggt acatcagcgc ggtcgggtcg
      961 cccaccgtct cgttgatgat cggccgctgc gcctgcgcgg gcagcacgtt ctgcacctgg
     1021 ttcaccttgg acaggatctg cgacaccgcc gcgttcgggt cgaagttgag gcgcatgttg
     1081 gcgatgatcg tcgactgccc cggcgcgctg gtggcggtca tgtagtcgat gccgggcgca
     1141 ctcgcaatgg cctgctccag cggcgtggtg atgaacgcgc cgacggtttc cgggccggcg
     1201 ccggggtagg cggtggtgat cgtcaccacc gtgctggtca cggtcgggta ttcgcggatc
     1261 gtcatgccgg tccacgcgcg cgcgccgagc agcaggatga cgaggctgat cgcgctcgcc
     1321 agcaccgggc gacggatgaa gaggtcggtg aatttcatcg cgcgtgcctt accgctgcac
     1381 cgtgctgtcg accgttaccg gcatgccgtc gcgcagcttg ttctggccgg cgacgaccac
     1441 cgtggcgccg gcgtcgaggc cgctggcgat gagcgcctgg ccgtcgcgct cctcgctcac
     1501 ctgcaccacc tgcggatgca ccaccttgcc gtgggcgtcg ctggcgacca cgtacacgct
     1561 gtcaccgaag gtgctgtacg cgatggccgt gtgcggcacg acgacgccgt gccgcggcgt
     1621 gccgagcgcc agctgcacgt ggccgtacaa acccgggcgc aggcggccgt cggggttttc
     1681 cagcgtggcc tgcagcgcga cgttgcgcgt cgccgggtcc acccgcgcgc cgaccgcggt
     1741 gatggtgccg gcgaagtgca cgtccggaaa cgcatcggcg ctgaagctga cctggctgcc
     1801 cggcttgagt tgcggcagct gtgattgcgg cacggtgaag tcgagcagca gcgggttcca
     1861 gctttgcagg tcgacgaccg gcgtgcccgg cgagacgtac tggccgaggc tcacttcgcg
     1921 gatgccgacg gtgccggcga atggcgcgct gatgtgcagc ttggcgagtg tcgcgcggtc
     1981 gccttcgacg gcggcgcggg cgatgccggc gttcgcctgc gcggtctgca ggtcggacag
     2041 gctggacgcc ttggcggcat agagtgtctg cgtgcgttcc agcgtggcct gggccagtgc
     2101 gagcttcgcc gcatcggcat gcagcagcgc gagctggctg gaatcgtcga ggcgcaccag
     2161 cagctggccc tggcgtacgc gggcgccgga ggcaaacgcg atggcggtga cgttgccggc
     2221 gatctgcgcg gtgatctcgg tgccttgcac cgcctccagg ctgccgacca cgctcgcacg
     2281 cggtgcccac gtcgccgtgc ccgccaccgc ggtggcgacg gccaccggcg gctggccgtg
     2341 cggctgcgcc gcggcgcgat gatccgcata cagccgcgtg ccgaagatcg cgccgaacac
     2401 cacgaccagc gcgatgccgg tcaccagcca tgccttgtgc atcattgatc tccttgccgc
     2461 gcgacggcct gcgccgtggc ggccggccat tgcccgccgc ccagcgcgac gtacaacgcc
     2521 gtggtgtcgg cataccgctg cgcctgcgcc ttgacctgcg cgatgcgcgc gttttcgagc
     2581 tgcatctcgc tggtcatcag gctgaggtag tcgacgccgc cggcgcggta ttgcgcggcg
     2641 accaggtcgt tcgcctgctg cgcggcacgc aacgcgcggg tctgcgcgtc gagcaggccg
     2701 gcgtcgtggt cgagcgcgcg cagcacgtcg gcgacgttgc ggaatgcgcc gagcacggca
     2761 ccccgatagt tggcgaacac gccgcgatac gcggcttcgg cggcctgttt ctccgccttt
     2821 agcgtgccgc cctcgaacac cggctgcacg aggccggcag ccacgttcca gatgcggctg
     2881 gccgggctga acaagccg
//
LOCUS       DASSVL010000171         2694 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_286637, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000171 DASSVL010000000
VERSION     DASSVL010000171.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2694)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2694)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2694
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_286637"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1351)
                     /locus_tag="VFM52_02950"
     CDS             complement(<1..1351)
                     /locus_tag="VFM52_02950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015446459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pitrilysin family protein"
                     /protein_id="HET8764155.1"
                     /translation="MRLRPASLLATFLLAVAAVVPAARAAEPLGVPPIDYHTRTLANG
                     LQVISVVDRASPDVAVQMWYHVGSKDDPQGRSGFAHLFEHLMFKSTKHMGAEQFDRLT
                     EDVGGANNASTGADVTNYFEVVPANHLQTILWAEAERLSNLNVDEKNFESERAVVEEE
                     YRQSVLAQPYGKLFNAIDAHSYTLHPYKRPTIGSIADLDAAKLPDVIAFHTTFYRPDN
                     ATLIVVGNFDPKQLDAWVDQYFGWIPKPATPIPQVDVKEPRRRKDARYAVTSATAPLP
                     AVAMTWLIPPAADAKDLVPLQVAAALLAQGQSSRLYQSLVYRHQVAQQVGADADGRVG
                     PGLFTVYAILASGHTAEQAAKLLRSEIIWLATQPISGTELDKVKTQLLTAALKQRQTA
                     QGTAFALGQAALIDGSPEHVNTDLAALQKVTEQDVHRVLQKYVTGAHSVTIDYEPQKA
                     "
     gene            complement(1468..>2694)
                     /locus_tag="VFM52_02955"
     CDS             complement(1468..>2694)
                     /locus_tag="VFM52_02955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007510302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HET8764156.1"
                     /translation="ANVPDLRVALTPVQFIGGGGGGDSGGPQYSFQLTSTAGVALQVP
                     TLKLARVMRTMPQFRDVTTSFDSIGKQQLLEVDRDAAARLHLGVAQVDDALNDAFGQS
                     PVSAIYSEINRYQVVLTSNKADTLSPDALLNTYVRNTQGKMIPLSAVARIRPHIAPVS
                     IRHYNQVESSSVSYNLAKGVTPVAALKLVDQAIAAAQLPAGVQKRYTGENKDMLDSLT
                     NSLLLLLAVIGAMYVVLGILYESLIHPLTILSTLPAAGAGAFLAMLVTQTQLTLMSVI
                     AVLMLIGIVKKNAILMVDFALVGERERGLDAPAAIREAALVRFRPITMTTLVAMGAAL
                     PLAIGFGIGSEMRQPLGIAILGGLAVSQLLTLLSTPAMYLWQHDHRERKAKRRALRAE
                     VRRPRELAKQVPVLPQ"
BASE COUNT          420 a          909 c          914 g          451 t
ORIGIN      
        1 cggccttttg cggttcgtag tcgatggtga cgctgtgcgc gccggtcacg tacttctgca
       61 gcacgcgatg cacgtcctgt tcggtgacct tctgcaacgc ggccaagtcg gtattgacgt
      121 gttccgggct gccgtcgatc agcgccgcct gccccagcgc gaacgcggtg ccctgcgcgg
      181 tctgccgctg cttgagcgcc gcggtcaaga gctgggtctt caccttgtcc agctcggtgc
      241 cggagatcgg ctgggtggcg agccagatga tttcgctgcg cagcaacttc gccgcctgct
      301 ccgccgtgtg gccgctggca aggatcgcgt acacggtgaa cagccccggc ccgacccggc
      361 catccgcgtc ggcgccgacc tgctgggcca cctggtggcg atacaccagc gactggtaca
      421 gccgcgagga ttgcccctgc gccagcagcg cggcagccac ctgcagcggc accagatcct
      481 tggcgtccgc ggccggcggg atcagccagg tcatcgccac cgccggcagc ggcgcggtgg
      541 cactggtgac ggcgtagcgc gcgtccttgc gccgcctggg ttccttcacg tccacctgcg
      601 ggatcggggt ggccggcttc gggatccagc cgaaatactg gtcgacccac gcgtcgagct
      661 gtttcgggtc gaagttgccg accacgatca gcgtcgcgtt gtccggccga tagaaggtgg
      721 tgtggaacgc gatcacgtcg ggcagcttcg ccgcgtcgag atcggcgatc gagccgatcg
      781 tcggccgctt gtacgggtgc agcgtgtacg agtgcgcgtc gatcgcgttg aacagcttgc
      841 cgtacggctg cgccagcacg ctctggcggt attcctcctc caccaccgca cgttcggatt
      901 cgaaattctt ctcgtcgacg ttgaggttcg acagccgctc ggcctcggcc cacaggatgg
      961 tctgcaggtg attggccggc accacctcga aatagttggt gacgtcggcg ccggtcgagg
     1021 cgttgttcgc gcccccgacg tcctcggtca gccggtcgaa ctgctcggca cccatgtgct
     1081 tggtgctctt gaacatcagg tgctcgaaca ggtgggcaaa cccggagcgg ccctgcgggt
     1141 catccttgga gcctacgtgg taccacatct gcaccgccac gtcggggctc gcgcgatcga
     1201 ccacgctgat cacctgcagg ccgttggcca gcgtgcgcgt gtggtagtcg atcggtggca
     1261 cgccaagcgg ctcggcggcg cgcgccgccg gcaccaccgc ggcaacggca agcaggaaag
     1321 tggccaggag cgacgccgga cgcagacgca tgggcaggtt ccgtaggcgg aaaggcccaa
     1381 ccttagcaag catcgctgaa ccgtgcgtgt gacatccgac ccgcgacacg gaaccatcgt
     1441 ccgtgccacc gggtcgccac gcggcgccta ctgcggcagc accggcacct gcttggccag
     1501 ctcgcgcggg cggcggactt cggcgcgcag cgcgcggcgc ttcgccttgc gctcgcggtg
     1561 gtcgtgctgc cacaggtaca tcgccggcgt ggacagcagc gtcaagagct gcgacaccgc
     1621 aaggccgccg aggatcgcga tgccaagcgg ctggcgcatt tccgagccga tgccgaagcc
     1681 gatcgccagc ggcagcgcgg cgcccatcgc caccagcgtg gtcatggtga tcgggcggaa
     1741 ccgcaccagc gccgcctcgc ggatcgccgc cggcgcatcc aggccgcgct cgcgttcgcc
     1801 gaccagggcg aagtcgacca tcaggatcgc gttcttcttg acgatgccga tcagcatcag
     1861 caccgcgatc acgctcatca gcgtgagctg ggtctgggtg accagcatgg caaggaacgc
     1921 gccggcgccg gccgccggca gcgtggacag gatggtgagc ggatggatca ggctttcgta
     1981 cagaatgcca agcaccacgt acatcgcgcc gatcaccgcc agcagcaaca gcagcgagtt
     2041 ggtcagcgag tcgagcatgt ccttgttctc gccggtgtag cgcttctgca cgccggcggg
     2101 caattgcgcg gcggcaatcg cctggtcgac gagtttcagc gcggccaccg gcgtcacgcc
     2161 cttggccagg ttgtaactga cgctggagga ctcgacctgg ttgtagtgcc ggatcgacac
     2221 cggcgcgatg tgcgggcgga tgcgcgccac cgccgacagc ggaatcatct tgccctgcgt
     2281 attgcgcacg taggtattga gcagcgcatc ggggctcagc gtgtcggcct tgttcgaggt
     2341 gagcaccacc tggtaccggt tgatctccga gtagatcgcg gacaccgggg actgcccgaa
     2401 cgcatcgttc agcgcgtcgt cgacctgcgc cacgcccagg tgcaggcgcg ctgccgcatc
     2461 gcggtccacc tcaagcaatt gctgcttgcc gatgctgtcg aagctggtgg tgacgtcgcg
     2521 gaattgcggc atcgtgcgca tcacccgggc cagcttcagc gtcggcacct gcaacgccac
     2581 gccggcggta ctggtgagct ggaacgagta ttgcggcccg ccgctgtcgc caccgccacc
     2641 gccgccaatg aactgcaccg gggtcagcgc cacacgcagg tcgggcacgt tggc
//
LOCUS       DASSVL010000172         2507 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_724464, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000172 DASSVL010000000
VERSION     DASSVL010000172.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2507)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2507)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2507
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_724464"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            58..978
                     /locus_tag="VFM52_02960"
     CDS             58..978
                     /locus_tag="VFM52_02960"
                     /EC_number="2.6.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018973496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004084 - branched-chain-amino-acid
                     transaminase activity [Evidence IEA];
                     GO_process: GO:0009081 - branched-chain amino acid
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid transaminase"
                     /protein_id="HET8764157.1"
                     /translation="MPITPTKYIWFNGELVPWEKATVHVMTHALHYGSSVFEGIRCYS
                     TPRGPAVFRLAPHTRRLFDSAKIYRMELPYSPAQISDACKAVVRENGLKSAYLRPLVW
                     RGYGEIGVFPLKNPVEVMVAAIEWGAYLGAEALENGVDVAVSSWQRVAPNTLPAMSKA
                     GGNYLSSQLIVMEAVRHGYAEGIALDVSGNLSEGSGENLFVIRDGVVFTPPLTAALLP
                     GITRDTILTLARHLGYEVREQNLPREALYLADELFFTGTAAEVSPIRSVDRITIGAGK
                     RGPITTAIQQAFFGLFSGETEDRWGWLEYV"
     gene            1082..>2507
                     /gene="leuC"
                     /locus_tag="VFM52_02965"
     CDS             1082..>2507
                     /gene="leuC"
                     /locus_tag="VFM52_02965"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005414408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009316 - 3-isopropylmalate dehydratase
                     complex [Evidence IEA];
                     GO_function: GO:0003861 - 3-isopropylmalate dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009098 - leucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase large subunit"
                     /protein_id="HET8764158.1"
                     /translation="MTTPKTLFEKIWANHIVRPETPETPAVLYIDLHLIHEVTSPQAF
                     TELRQRGLKVRRPERTLATMDHSTPTTPRGRDGIIPVLDAQAAAQLTQLERNCADFGI
                     PLFKLGDHRQGIVHVIGPEQGLTQPGMTVVCGDSHTSTHGAFGALAFGIGTSEVAHVL
                     ASQCLIQNRPKTMEVRVDGRLGPGVTAKDIILAIIAQNGVGGGTGYVFEYTGEAIRAL
                     SMEERMTICNMSIEGGARAGMIAPDETTFQYVAGRPYAPKGADWDAALAAWRTLPGDD
                     GAAYDKVVTLDADALTPMITYGTNPGMGMPIDGRIPTPNELADPSQRTALDKALRYMD
                     LRPGQPLLGQKIDMVFLGSCTNSRISDLRLAASLIKGRTVAPGVRVMVVPGSQQVKMQ
                     AEAEGLHEVFKAAGAEWREAGCSACLAMNDDKVPAGKYAVSTSNRNFEGRQGAGGRTH
                     LLSPPMAAAAALTGHLVDVREVMAQ"
BASE COUNT          431 a          881 c          839 g          356 t
ORIGIN      
        1 caagacatcg tataatgcca cgagtctgtt cataccgaat cgacaaggag aacgaccatg
       61 ccgatcactc ccaccaagta tatctggttc aacggcgagc tggtgccctg ggagaaggcc
      121 accgtccatg tgatgaccca cgcgctgcac tatggctcgt cggtgttcga gggcatccgc
      181 tgctacagca cgccgcgcgg cccggcggtc ttccggctgg cgccgcacac ccggcgcctg
      241 ttcgactcgg ccaagatcta tcgcatggag ctgccctata gcccggccca gatcagcgac
      301 gcctgcaagg ccgtcgtgcg cgagaacggc ctcaagagcg cctacctgcg cccgctggtc
      361 tggcgcggct atggtgagat cggcgtcttc ccgctcaaga acccggtcga ggtcatggtc
      421 gcggcgatcg agtggggcgc ctacctgggc gccgaggcgc tcgagaacgg cgtggacgtg
      481 gccgtctcgt cgtggcagcg cgtggcgccc aacacgctgc cggcgatgtc caaggccggc
      541 ggcaactacc tctcctcgca gctgatcgtg atggaggccg tgcgccacgg ctacgccgag
      601 ggcatcgcgc tggacgtcag cggcaacctg agcgagggct cgggcgagaa cctgttcgtg
      661 atccgcgacg gcgtggtctt cacgccgccg ctcaccgccg cgctgctgcc gggcatcacc
      721 cgcgacacaa ttctgaccct ggcgcgccac ctgggctacg aggtgcgcga gcagaacctg
      781 ccgcgcgagg cactgtacct ggccgacgag ctgttcttca ccggcacagc cgccgaggtg
      841 tcgccgatcc gctcggtcga caggatcacg atcggcgcgg gcaagcgcgg gccgatcacc
      901 acggcgatcc agcaggcctt cttcgggctg ttcagcggcg agaccgagga tcgctggggc
      961 tggctggagt acgtttagca gtcagcagtc agcagccagc agccaccgac gaatttcaat
     1021 gcaattcagc gacgcctgcc gactgccgac tgcctgctgc ggttcatgga gcgaaggatc
     1081 aatgaccaca ccaaagactc tgttcgagaa gatctgggcc aaccacatcg tccggcccga
     1141 gacgcccgag acgccggcgg tgctgtatat cgacctgcac ctgatccacg aggtcacgtc
     1201 gccgcaggcg ttcaccgagc tgcgccagcg cggcctcaag gtgcgccggc cggagcggac
     1261 cctggcgacc atggaccact cgacgcccac cacgccgcgc ggccgcgacg ggatcatccc
     1321 ggtgctcgac gcgcaggccg ccgcccagct aacgcagctc gagcgcaact gcgccgattt
     1381 cggcatcccg ctgttcaagc tcggcgacca ccgccagggt atcgtccatg tgatcggccc
     1441 cgagcagggc ctgacccagc caggcatgac cgtggtctgc ggcgacagcc acaccagcac
     1501 ccacggcgcg tttggcgcgc tggccttcgg catcggcacc tccgaggtcg cgcatgtgct
     1561 ggccagccag tgcctgatcc agaaccgccc caagactatg gaggtgcgcg tggacggccg
     1621 gctcgggccg ggcgtcaccg ccaaggatat catcctggcg atcatcgccc agaacggcgt
     1681 cggcggcggc accggctatg tgttcgagta caccggcgag gccatccgcg cgctcagcat
     1741 ggaagagcgc atgacgatct gcaatatgtc gatcgagggc ggcgcacgcg ctggtatgat
     1801 cgcgcccgac gagacgacct tccagtatgt cgccgggcgg ccctacgccc ccaagggcgc
     1861 ggattgggat gcggcgctgg cggcatggcg cacgctgccc ggcgacgacg gcgcggccta
     1921 cgacaaggtc gtgacgctgg acgccgatgc gctgacgccc atgatcacct acggcaccaa
     1981 ccccggcatg ggcatgccga tcgacggccg catcccgaca cccaacgagc tggccgaccc
     2041 cagccagcgc accgcgctcg acaaggcgct gcgctacatg gacctgcgcc cgggccagcc
     2101 gctgctgggc cagaagatcg acatggtctt cctgggcagc tgcactaact cgcggatctc
     2161 cgacctgcgc ctggcggcca gcctgatcaa gggccgcacg gtggcccccg gcgtgcgcgt
     2221 gatggtcgtg cccggcagcc agcaggtcaa aatgcaggcc gaggccgagg ggctgcacga
     2281 ggtcttcaag gccgccggcg ccgagtggcg cgaggcgggg tgcagcgcct gcctggccat
     2341 gaacgacgac aaggtgcccg ccggcaagta cgcggtcagc accagcaacc gcaacttcga
     2401 gggccggcag ggcgcgggcg gccggacgca cctgctctcg ccgccgatgg cggccgcggc
     2461 ggcgctgacc ggccacctgg tcgacgtgcg cgaggtcatg gctcagg
//
LOCUS       DASSVL010000173         2605 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_922241, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000173 DASSVL010000000
VERSION     DASSVL010000173.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2605)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2605)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2605
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_922241"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2605
                     /gene="gcvP"
                     /locus_tag="VFM52_02970"
     CDS             <1..>2605
                     /gene="gcvP"
                     /locus_tag="VFM52_02970"
                     /EC_number="1.4.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017172050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004375 - glycine dehydrogenase
                     (decarboxylating) activity [Evidence IEA];
                     GO_process: GO:0019464 - glycine decarboxylation via
                     glycine cleavage system [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="aminomethyl-transferring glycine dehydrogenase"
                     /protein_id="HET8764159.1"
                     /translation="QGYYGTHTPNVILRNILENPAWYTAYTPYQAEISQGRMEALINF
                     QTMCADLTGMEIANASLLDEATAAAEAMTLAKRSAKAKGNTIVVFGDTHPQTIEVMRT
                     RAEPLGLAITLANSAEEWDAAIAADDYFAALIQYPASSGWLLDWSGEVAKIHAKGALA
                     IFATDLLALTLLKPPGEMGADIVVGNTQRFGVPFGFGGPHAAFMACRDTYKRHMPGRL
                     IGVSIDAEGNPAYRLTLQTREQHIRREKATSNICTAQVLLAVMASMYAVYHGPEGLVR
                     IASRVARLTAILKAGLQQLGFDQFHHDSAFDTLSLKTGERTDAIAARAVALGANLRKA
                     WGEYLCISLDETTTRADIELLWRIFGGDDAKLPSVDALDANTPSLIPPALQRTSAFLT
                     HPVFNTYHSESELMRYLRALADKDLALDRTMIPLGSCTMKLNATAEMIPITWPEFANI
                     HPLAPAAQTQGYAELIDGLEKMLVEITGYDAVSLQPNAGAQGEYTGLLAIRAYHHSRG
                     EDHRDVCLIPESAHGTNPASAHMCGMRVVVTKCDANGNVELDDIRAQAEKYSANLAAI
                     MLTYPSTHGVFEEDVVEICKIVHAHGGQVYTDGANMNALVGLAKPGKWGSDVSHLNLH
                     KTFCIPHGGGGPGVGPCAVKAHLAPFLPRTLGGEGAVGMVAAASYGSASILPISWMYI
                     TLMGQQGLRRATQVALLNANYIAKRLEAHYPTLYTGRNGLVAHECILDLRPIKDATGI
                     GAEDVAKRLIDFGFHAPTLSFPVAGTLMVEPTESESRYELDRFIDAMIQIRDEIRAIE
                     EGKLDREDNPLKNAPHTATMVSASEWTHAYPRELAAFPLASLKLQKYWPPVARVDNVY
                     GDKHIMCACIPV"
BASE COUNT          469 a          953 c          834 g          349 t
ORIGIN      
        1 ccagggctac tacggcacgc acacgccgaa cgtgatcctg cgcaacatcc tcgagaaccc
       61 ggcctggtac acggcgtaca cgccctacca ggcggagatc tcgcagggcc gcatggaagc
      121 gctgatcaac ttccagacca tgtgcgccga cctcaccggc atggagatcg ccaacgcctc
      181 gctgctggac gaagccaccg cggcggccga ggcgatgacc ctggccaagc gttcggcgaa
      241 ggcgaagggc aacaccatcg tcgtgttcgg cgacacgcat ccgcagacca tcgaggtgat
      301 gcgcacgcgc gccgagccgc tgggcctggc gatcacgctg gccaactccg ccgaggaatg
      361 ggatgccgcg atcgccgccg acgactactt cgccgcgctg atccagtacc ccgccagcag
      421 cggctggctg ctcgactgga gcggggaagt cgcgaagatc cacgcgaagg gcgcgctggc
      481 gatcttcgcc accgacctgc tcgcgctgac cctgctcaag ccgccgggcg agatgggcgc
      541 cgacatcgtc gtcggcaaca cccagcgctt cggcgtgccg ttcggtttcg gcggcccgca
      601 cgccgcgttc atggcctgcc gcgacaccta caagcggcac atgccggggc gcctgatcgg
      661 cgtgtcgatc gacgccgagg gcaaccccgc ctaccgcctc acgctgcaga cgcgcgagca
      721 gcacatccgc cgcgagaagg ccaccagcaa catctgcacc gcgcaggtgc tgctcgccgt
      781 gatggcctcg atgtacgccg tctaccacgg cccggaaggc ctggtgcgca ttgcctcgcg
      841 cgtggcgcgg ctcaccgcga tcctcaaggc cggcctgcag cagctcggct tcgaccagtt
      901 ccaccacgac agcgcgttcg acacgctgag cctcaagacc ggcgagcgca ccgacgccat
      961 cgcggcacgc gccgtggcgc tgggcgccaa cctgcgcaag gcgtggggcg aatacctgtg
     1021 catctcgctg gacgagacca ccacgcgcgc ggacatcgag ctgctgtggc gcatcttcgg
     1081 cggcgacgac gccaagctgc cgagcgtcga cgcgctggat gccaacacgc cgtcgctgat
     1141 cccgccggcg ctgcagcgca cctcggcgtt cctcacccac ccggtgttca acacctacca
     1201 cagcgaaagc gagctgatgc gctacctgcg cgcgctggcc gacaaggatc tcgcgctcga
     1261 ccgcacgatg atcccgctcg gctcgtgcac gatgaagctc aacgccactg cggagatgat
     1321 cccgataacc tggcccgagt tcgccaacat ccacccgctc gcaccggccg cgcagacaca
     1381 gggctacgcc gagctgatcg acgggctgga aaagatgctg gtggagatca ccggctacga
     1441 cgcggtgagc ctgcaaccga acgccggcgc gcagggcgaa tacaccggcc tgctcgcgat
     1501 ccgcgcgtat caccactcgc gcggcgagga tcaccgcgac gtgtgcctga tccccgagtc
     1561 cgcgcacggc accaacccgg cctccgcgca catgtgcggc atgcgggtgg tggtgaccaa
     1621 gtgcgacgcg aacggcaacg tggaactgga cgacatccgc gcgcaggccg agaaatactc
     1681 ggcgaatctc gccgcgatca tgctcaccta cccgtccacg cacggcgtgt tcgaggagga
     1741 cgtggtcgag atctgcaaga tcgtccacgc ccacggcggt caggtgtaca ccgacggcgc
     1801 caacatgaac gcgctggtgg gcctcgccaa gccgggcaag tggggctcgg acgtgtcgca
     1861 cctgaacctg cacaagacct tctgcatccc gcacggcggc ggcggcccgg gcgtcggccc
     1921 gtgcgcggtg aaggcgcacc tcgcgccatt cctgccgcgc acgctgggcg gcgagggcgc
     1981 ggtcggcatg gtggcggcgg ccagctacgg ctcggcgtcg atcctgccga tctcgtggat
     2041 gtacatcacg ctgatgggcc agcagggcct gcgccgcgcg acccaggtcg cgctgctcaa
     2101 cgccaactac atcgccaagc ggctcgaagc gcactacccc accctgtaca ccggccgcaa
     2161 cgggctggtg gcgcacgagt gcatcctcga cctgcgcccg atcaaggacg ccaccggcat
     2221 cggcgccgag gacgtggcca agcggctgat cgatttcggc ttccatgcgc ccacgctgag
     2281 cttcccggtc gccggcacct tgatggtgga gccgaccgag agcgaatcgc gctacgaact
     2341 ggaccgtttc atcgacgcga tgatccagat ccgcgacgag atccgcgcga tcgaggaggg
     2401 caagctcgac cgcgaggaca acccgctgaa gaacgccccg cacaccgcca ccatggtcag
     2461 cgccagcgag tggacccacg cctacccgcg cgaactggcc gccttcccgc tggccagcct
     2521 gaagctgcag aagtactggc cgccggtcgc ccgcgtcgac aacgtctacg gcgacaagca
     2581 catcatgtgc gcctgcatcc cggtg
//
LOCUS       DASSVL010000174         3134 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_540693, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000174 DASSVL010000000
VERSION     DASSVL010000174.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3134)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3134)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3134
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_540693"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(48..1148)
                     /locus_tag="VFM52_02975"
     CDS             complement(48..1148)
                     /locus_tag="VFM52_02975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019466610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P) transhydrogenase subunit alpha"
                     /protein_id="HET8764160.1"
                     /translation="MPITVAALRETAAAERRVAITPEVAKKLAAKDVRVMLEHGAGAA
                     AGFPDAAYPQATFASADDVLAHADLLACVLPPEDAVFGRLREGALVVGQLRPYGAAGR
                     IAALAARKLTAFALELLPRTTRGQAMDVLSSQAAVAGYRAMLIAAESCPKFFPMLTTA
                     AGTIRPSKVLVIGAGVAGLQAIATARRLGAQVEGYDVRPETREQVESLGAKFLDLGVS
                     AAGSGGYARELSAEEKAAQQQALAEHLKVFDVVVSTAAVPGRPAPKILSTAMIEGMKP
                     GALVVDLAAESGGNCALTRPGERVEHGGVTVLGPLNLPAGAPLHASEMYARNVLHFVE
                     LLLKDGALAPDFDDELVAKSCLVRAGEVLFKA"
     gene            1272..1688
                     /locus_tag="VFM52_02980"
     CDS             1272..1688
                     /locus_tag="VFM52_02980"
                     /EC_number="3.5.4.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007080037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004126 - cytidine deaminase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0009972 - cytidine deamination [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytidine deaminase"
                     /protein_id="HET8764161.1"
                     /translation="MAVITPHAELLDLARAARRHAHAPYSGFAVGAAVLTRDGRHFLG
                     CNVENAAYGLCNCAERTALFAAVAAGCKPGDFAALAVVADTSEPVSPCGACRQVMSEL
                     CAADMPVILGNLGVASQETSVAALLPGAFALPPPVR"
     gene            1739..2308
                     /locus_tag="VFM52_02985"
     CDS             1739..2308
                     /locus_tag="VFM52_02985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004091174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase"
                     /protein_id="HET8764162.1"
                     /translation="MSNPLQFLLDRHSVPSRQLIEPAPDDTTLRELLAAAIRVPDHGT
                     LVPFRLIRLEGEAKLRFGERLADIALRKTPDLPEPKLDKERKRYTHAPLVIAVIARLD
                     TSGRIPEIEQRMSAGCVAHNLLLGAQALGFGAQWLTSWAAYDRDAAAVLGLADNEHVV
                     GFVHIGTPKIAVPNRKRPVLDDVLATWTP"
     gene            2305..>3134
                     /locus_tag="VFM52_02990"
     CDS             2305..>3134
                     /locus_tag="VFM52_02990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007809491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5'-3' exonuclease H3TH domain-containing
                     protein"
                     /protein_id="HET8764163.1"
                     /translation="MSAPGAYLVDGSLYVFRAWHSLPDDFRDTDDRPVNAVHGFTRFL
                     CELLEKANPQRIAVAFDASLTSSFRNAIYPPYKANRELPPPDLEHQFVLCRAITAALG
                     ITVLIDHQYEADDLIGSALWNLRGHGEASVIVSADKDFGQLLGAHDLQWDYARNHRWG
                     PDGVMEKLGVRPEQVADYLALCGDAVDNIPGVPGIGAKTAAALLTRFGTLDDLLARID
                     EIPFLRLRGAASIAAKLREHGEDARLFRRITRIALDAPVPTDIDALRRHAADGDQLHA
                     L"
BASE COUNT          460 a         1209 c         1022 g          443 t
ORIGIN      
        1 tcaccaggca acccaccggc cgccatgatc cgcggcgcat ggctgactca agccttgaac
       61 agcacctcgc cagcccgcac gaggcagctc ttcgccacca gctcgtcgtc gaaatcgggc
      121 gcgagcgcgc catccttcag caacagctcg acgaagtgca gcacgttgcg ggcatacatt
      181 tccgaggcgt gcagcggcgc gccggcggga aggttcagtg gcccgagcac ggtgacgccg
      241 ccgtgctcga cgcgttcgcc cggccgggtc agcgcgcagt tgccgccgct ctccgcggca
      301 aggtcgacga ccagcgcgcc cggcttcatg ccttcgatca tcgcggtgga gaggatcttt
      361 ggcgccggtc gccccggcac cgcagcggtc gacaccacca cgtcgaatac cttgaggtgc
      421 tcggccagcg cctgctgctg ggcggccttc tcctcggccg acagctcgcg cgcatagccg
      481 ccgctgccag cggcactgac gccgagatcg aggaatttcg cgccgagcga ttccacctgc
      541 tcgcgggttt ccgggcgcac gtcgtagcct tcgacctggg cgcccagccg gcgcgcggtg
      601 gcgatcgcct gcagcccggc gacgccggcg ccgatcacca gcactttgga cggccggatg
      661 gtgccggcgg cggtggtcag catcggaaag aacttggggc aggactcggc ggcgatcagc
      721 atcgcacggt agccggccac cgccgcctgc gagctgagca cgtccatcgc ctgcccgcgg
      781 gtggtgcgcg gcaggagctc cagcgcgaac gcggtgagct tgcgcgccgc cagcgccgcg
      841 atgcgccccg ccgcgccata ggggcgcagc tggccgacga ccagcgcgcc ctcgcgcagc
      901 ctgccgaata cggcatcctc gggcggcagc acgcaggcca ggaggtcggc gtgggccagt
      961 acgtcgtcgg cgctggcgaa cgtcgcctgc ggatacgccg cgtcagggaa cccggcggcc
     1021 gcaccggcgc cgtgttcgag catgacccgc acgtcttttg ccgcgagctt cttcgccacc
     1081 tcgggcgtga tcgccacgcg gcgctcggcc gcagccgttt cccgcaaggc agctaccgtg
     1141 atcggcattg cgcatcccct cgtcgatgac cctgcgcatc ttatcggctc cgccgccgct
     1201 gccaccagcg cgccacccac cttgccgtgc gctaatctgg cctgccacct tcggtgacca
     1261 tgaggaacgc gatggccgtc atcactccgc atgccgagtt gctcgacctt gcccgcgccg
     1321 cgcggaggca tgcccacgcg ccctactccg gctttgccgt gggcgccgcc gtgctcaccc
     1381 gcgacggccg ccacttcctc ggttgcaacg tcgagaacgc cgcctatggc ctgtgcaact
     1441 gcgccgagcg cacggcgctg ttcgctgccg tcgccgccgg ctgcaagccg ggggatttcg
     1501 ccgcgctcgc ggtggtggcc gacacctccg agccggtcag cccgtgcggc gcctgccggc
     1561 aggtgatgag cgagctgtgc gccgccgaca tgccggtgat cctcggcaac ctcggcgtcg
     1621 ccagccaaga gaccagcgtc gccgccctgc tgccgggcgc cttcgccctg ccgccaccgg
     1681 tgcgctgaag cgacaccgcg cgccggttac catgcaggtt taccgtcgcg gcccacccat
     1741 gtccaacccg ctgcaattcc tgctcgaccg ccactccgtc ccgtcgcgcc agctgatcga
     1801 gcccgcgccc gacgacacca cgctgcgcga gctgctggcc gcggcgatcc gggtgcccga
     1861 ccacggcacg ctggtgccgt tccggctgat ccgcctcgag ggcgaggcca agttgcgctt
     1921 cggcgagcgc ctggccgaca tcgcgttgcg caagacaccc gacctgcccg agcccaagct
     1981 cgacaaggaa cgcaagcgct acacccacgc gccgctggtg atcgcggtga tcgcgcggct
     2041 cgacacctcg ggccgcatcc cggaaatcga gcagcgcatg agcgccggct gcgtcgcgca
     2101 caacctgctg ctcggcgccc aggcactggg cttcggcgcg caatggctca ccagctgggc
     2161 cgcctacgac cgcgatgcgg cggcagtgct cggactcgcg gacaacgagc acgtggtcgg
     2221 cttcgtgcac atcggcacgc cgaagatcgc ggtgcccaac cgcaagcgcc cggtgctcga
     2281 cgacgtgctc gccacgtgga cgccatgagc gcgccggggg cgtatctcgt cgacggcagc
     2341 ctgtacgtgt tccgcgcctg gcattcgctg ccggacgatt tccgcgacac cgacgaccgc
     2401 ccggtcaacg ccgtgcacgg cttcacgcgg ttcctgtgcg aactgctgga aaaggccaac
     2461 ccgcaacgca tcgcggtcgc gttcgacgcc tcgctcacca gttcgttccg caacgcgatc
     2521 tacccgccgt acaaggccaa ccgcgaactg ccgccgcccg atctcgaaca ccagttcgtg
     2581 ctgtgccgcg cgatcaccgc cgcgctcggc atcaccgtgc tgatcgacca ccagtacgaa
     2641 gccgacgacc tgatcggcag cgcgctgtgg aacctccgag gccacggcga ggcgagcgtg
     2701 atcgtgtccg ccgacaagga tttcggccag ctgctcggcg cgcacgacct gcagtgggac
     2761 tacgcgcgca accaccgctg gggcccggat ggcgtgatgg aaaagctcgg cgtgcgcccc
     2821 gaacaggtgg ccgactacct cgcgctgtgc ggcgacgcgg tggacaacat ccccggcgtg
     2881 cccggcatcg gcgcgaagac cgccgccgcc ctgctcaccc gcttcggcac gctcgacgac
     2941 ctcctggccc gcatcgacga gattccgttc ctgcgcctgc gcggcgccgc cagcatcgcc
     3001 gcgaagctgc gcgagcacgg cgaggacgcc cgcctgttcc gccgcatcac ccgcatcgcg
     3061 ctcgacgccc cggtgcccac ggacatcgac gcgctgcgcc gccatgccgc cgacggcgac
     3121 cagctgcacg cgct
//
LOCUS       DASSVL010000175         2849 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_964410, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000175 DASSVL010000000
VERSION     DASSVL010000175.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2849)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2849)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2849
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_964410"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..673)
                     /locus_tag="VFM52_02995"
     CDS             complement(<1..673)
                     /locus_tag="VFM52_02995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004341258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HET8764164.1"
                     /translation="MRTPDDGTSAVTWRTHISLVLLSLVYIFSYIDRQVIAVVIEPIE
                     REFGLDDAAMGVLSGLAFGVMYAGLGIPVGRYADHHPRNKVVAICGALWSLATMACGL
                     ATQFWQLLVARMSVAVGEAGGMAPSISLISDLYPKKNRALAISVFMMGPQLGLLIGLA
                     FGAWIAQTYGWRHAFIWFGAPGIVLGLLVWIFVREPQRGRFDADGKAGAEEIKEPLFV
                     PLVRLL"
     gene            781..2220
                     /locus_tag="VFM52_03000"
     CDS             781..2220
                     /locus_tag="VFM52_03000"
                     /EC_number="1.2.1.68"
                     /inference="COORDINATES: protein motif:HMM:NF012398.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050269 - coniferyl-aldehyde dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006081 - cellular aldehyde metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="coniferyl aldehyde dehydrogenase"
                     /protein_id="HET8764165.1"
                     /translation="MPTVPSGTTATAPGAASLLAAQRAAFRAEGPVLASVRRARLQRA
                     IDMLVKFADPLCAAMGADFGGRAVAFSLMNDVLGSLATLKDARDHFETWMADQPRASV
                     APFDQFGATAWVKYQPKGVVGIIGTWNAPVFTLFAPLASVFAAGNRAVLKPSEVDPHT
                     ADVVARMVAESFDPAELAVVTGGPEVAADFSAQPWDHLVFTGSTVVGRKVMQAAAANL
                     VPVTLELGGKSPVLVGESADVANAAERIAVGKAQNSGQLCVAPDTVYVHASRADALVA
                     ALQQVYARLYPSNAGNGDVTPVVNAQHFARVEGYVADAAARGAKVVSAGAAPATAERR
                     MPLRIVIDPPADSAIAQHEIFGPALVLRTYGRIDEAIAAINAGERPLALYYFGSDEAE
                     QAKVLDNTLSGGVAINDVLMHAALEDAPFGGVGASGMGHYHGREGFLEFSHTRSVYQA
                     GTRDPRAEWGMLPPYTAQFEAMLRQGLTP"
     gene            2217..>2849
                     /locus_tag="VFM52_03005"
     CDS             2217..>2849
                     /locus_tag="VFM52_03005"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HET8764166.1"
                     /translation="MSADASALFSLAGRVAIVTGAGRGIGHACALMLARAGADVVLAA
                     RTATDLDAAAAEICALGRRALAVPTDVNDDAALDQLVARAMAEFGCLDIVVNNAGGTG
                     PNNPLKMPGAEFGGVLAWNVVPAYALTQKAMPYLRASGGGAVVNISSVAARYAQKNFS
                     AYGAAKAALNQMTRNLAQDYGPAVRVNAVEPGTIETEALAPYLTPERRERM"
BASE COUNT          452 a         1006 c          999 g          392 t
ORIGIN      
        1 tcagcaggcg cactagtggc acgaacagcg gctccttgat ttcctccgcg cccgccttgc
       61 cgtcggcgtc gaaacgcccg cgctgaggct cgcgcacgaa gatccacacc aggaggccta
      121 gcacgatgcc cggcgcgcca aaccagatga aggcgtggcg ccagccgtag gtctgcgcga
      181 tccacgcgcc gaacgcgagc ccgatcagca gcccaagctg cggtcccatc atgaacacgc
      241 tgattgccag cgcgcggttc ttcttcgggt acaggtcgga gatcagcgag atcgacggcg
      301 ccatgccgcc ggcctcgccg accgccaccg acatgcgcgc caccagcagt tgccagaact
      361 gggtggccag cccgcacgcc atcgtcgcca ggctccacag cgcgccgcag atcgccacca
      421 ccttgttgcg cgggtggtgg tcggcgtagc gccccaccgg gatgccgagg ccggcgtaca
      481 tcacgccgaa cgcgagcccg ctgagcacgc ccatcgccgc atcatccagc ccgaactcgc
      541 gttcgatcgg ctcgatcacc accgcgatca cctggcggtc gatgtaggaa aagatgtaga
      601 ccagcgacag cagcaccagg ctgatgtgcg tgcgccacgt gaccgcggaa gtgccgtcgt
      661 cgggagttct catgctggca tcgtgggcgt gcgggcgcgg acgaagcatc gtccttttgg
      721 acgacgagct ggcagcgggg caaagttagc gtcaaggcct tgaaacgagg gagttgcgcg
      781 atgccgaccg tgccatccgg aaccaccgca accgcgccgg gcgcggccag cctgctcgcc
      841 gcgcaacgcg ccgcgtttcg cgccgaaggg ccggtgctgg ccagcgtgcg ccgcgcgcgg
      901 ctgcaacgcg ccatcgacat gctggtcaag tttgccgacc cgctgtgcgc ggcgatgggc
      961 gcggatttcg gcgggcgcgc cgtggcgttc tcgctgatga acgacgtgct cggctcgctc
     1021 gccacgctga aagatgcgcg cgatcatttc gagacctgga tggccgacca gccgcgcgcc
     1081 agcgtcgcgc cgttcgacca gttcggcgcc accgcgtggg tgaaatacca gcccaagggc
     1141 gtggtcggca tcatcggcac ctggaacgcg ccggtgttca ccctgttcgc gccgctggcc
     1201 agcgtgtttg ccgccggcaa ccgcgcggtg ctgaagccgt ccgaggtcga tccgcacacc
     1261 gccgacgtcg tggcgcgcat ggtggcggaa agcttcgacc cggccgagct ggcggtggtc
     1321 accggcggcc ccgaggtcgc tgccgatttc agcgcgcagc cgtgggacca tctcgtgttc
     1381 accggcagca ccgtggtcgg ccgcaaggtg atgcaggccg ccgccgcgaa cctggtgccg
     1441 gtcaccctgg agctgggcgg caagtcaccg gtgctggtgg gcgagagcgc cgacgtcgcg
     1501 aacgctgccg agcgcatcgc cgtgggcaag gcgcaaaaca gcggccagct gtgcgtggcg
     1561 ccggacaccg tgtacgtgca cgcgagtcgc gccgacgcgc tggtggccgc gttgcagcag
     1621 gtctacgcgc gcctttatcc aagcaatgcc ggcaacggcg acgtcacccc ggtggtgaac
     1681 gcgcagcact tcgcgcgcgt cgaaggctac gtggccgacg ccgccgcgcg cggcgccaag
     1741 gtggtgagcg ccggcgcggc gccggcaacc gccgagcggc gcatgccgct gcgcatcgtc
     1801 atcgacccgc cggccgacag cgcgatcgcg cagcacgaaa tcttcggccc ggcgctggtg
     1861 ctgcgtacct acggccggat cgacgaagcc atcgccgcga tcaacgccgg tgagcggccg
     1921 ctggcgctgt actacttcgg cagcgacgag gccgagcagg cgaaggtgct ggacaacaca
     1981 ctttccggcg gcgtcgcgat caacgacgtg ctgatgcacg cggcgctgga agacgcgccg
     2041 ttcggcggcg tcggcgcctc cggcatgggc cattaccacg gccgcgaagg cttcctcgaa
     2101 ttcagccaca cgcgctcggt gtaccaggcc ggcacgcgcg acccgcgcgc ggagtggggc
     2161 atgctgccgc cgtacaccgc gcagttcgag gcgatgctgc gccaggggct gacaccgtga
     2221 gcgcggacgc ctccgcgttg ttctcgcttg ccggccgcgt cgccatcgtc accggcgccg
     2281 ggcgcggcat cggccatgcg tgcgcgctga tgctggcgcg cgccggcgcc gacgtggtgc
     2341 tggcagcacg caccgcgacg gatctcgacg cggcggcagc ggagatctgc gccctggggc
     2401 gccgcgcgct ggcggtgccg accgatgtca acgacgacgc ggcgctcgat caactggtgg
     2461 cgcgcgcgat ggccgagttc gggtgcctcg acatcgtggt gaacaatgcc ggcggcaccg
     2521 ggccgaacaa cccgctcaag atgcccggcg cagagttcgg cggcgtgctg gcgtggaacg
     2581 tggtgccggc gtacgcgctg acccagaaag ccatgccgta cctgcgcgca tccggcggcg
     2641 gcgcggtggt caacatctcc tccgtcgccg cgcgctacgc gcaaaaaaac ttcagcgcct
     2701 acggtgcggc caaggccgcg ctcaaccaga tgacgcgcaa cctggcccag gattacggtc
     2761 cggcggtgcg cgtcaatgcg gtggagccgg gcaccatcga gaccgaggcg ctcgcgccgt
     2821 acctcacgcc cgaacgccgc gaacgcatg
//
LOCUS       DASSVL010000176         2573 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_992718, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000176 DASSVL010000000
VERSION     DASSVL010000176.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2573)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2573)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2573
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_992718"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2573
                     /locus_tag="VFM52_03010"
     CDS             <1..>2573
                     /locus_tag="VFM52_03010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007809618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="Hpt domain-containing protein"
                     /protein_id="HET8764167.1"
                     /translation="DDLLRVKEALDLFQRQPGADPASLAPQCDVLARLGDTLGMLALA
                     VPRRVVEEQRRVLDDLVNHQRPADESTLLDVAGALLYVEASLDDHIESLGADDGVPGG
                     EGPSGLPRSEAQGVIATVMQEAIRNIEKVKEAIVGFVESGWDHAGLTAAPALMAEVAG
                     AARMLSAERPAELADGVGRFIHNELLVDQRVPGSAQMDHLADALAALEYYLEAVREHR
                     GGLAHIVDVAEHSLGELGYWPLSSARPLQAVPVPVPEPAAAAAPAPDAAVNDVPLSET
                     VSLYPGSDAADLLAVPETPSPMPTHDVDGLRYAETVADMVPAAVAAGDDADWIEIEEE
                     VEEQVPVAGAPGNAFRFDQSAEDIDDDIREIFLEEMQEEIDNLRAGVGAWLAEPERLD
                     TLTPIRRSFHTLKGSGRLVGIAALGEFAWRVEDMLNRVLDHTIEPHSGVQALVQHAIA
                     ALPQLLASLKGEGAPTAPIDAIMQTASKLAAGAAAARIEDCPPPMLETVRRKVRRRVP
                     RAAAAAIPTAAVTDAQSAAAAVPAAPAEMLPVSPLPAVDPVLLEILRSEVGQYLQAIR
                     AALAGQAGELTVDEPLLRAVHTMHGAIAMVDIPFLTRLLSPSESLLKRLRAADLPLPP
                     EGVALLARAADAVEQTLAQFDAAVPALPEVDALAAEVAALRDRYPEAKAPHFAVEPPA
                     GDAETQVPDHAAEDATPPPPVVPERLPESAEHDDYTRELIAALGAFEPDAPAPIEPAT
                     TEPAAQSAGAEPAAAERAAAEQAAAERAETERVAAEQAEAERLAAEQAQAEQEAAERE
                     AAERREAERAQAEQERARQAQLAEERAAREAAELQMRAAAEQAAAEQARRAAEQAAAT
                     D"
BASE COUNT          392 a          908 c          945 g          328 t
ORIGIN      
        1 aggacgacct gttgcgggtc aaggaagcgc tcgacctgtt ccagcgccag cccggtgccg
       61 atccggcctc gctggcgccg caatgcgacg tgctggcgcg cctgggcgat accctgggca
      121 tgctggcgct ggcggtgccg cgccgcgtcg tcgaggagca gcggcgcgtg ctcgacgacc
      181 tggtgaatca ccagcggccg gccgacgaat cgactttgct cgacgttgcc ggtgcgctgc
      241 tgtacgtcga ggcatcgctc gacgatcaca tcgaaagcct gggggccgac gacggcgtac
      301 cgggtggcga aggccccagc ggcctgccgc gcagcgaggc gcagggcgtg atcgccacgg
      361 tgatgcagga agcgatccgc aacatcgaaa aggtgaagga ggccatcgtc ggcttcgtcg
      421 aatccggctg ggatcacgct ggactcaccg ccgccccggc gctgatggcc gaagtggccg
      481 gtgccgcgcg catgctgtcc gccgaacgcc cggccgagct ggccgatggc gtcggccgtt
      541 tcatccacaa tgagctgctg gtcgaccagc gggttccggg cagcgcccag atggaccatc
      601 tggccgacgc actggcggcg ctggagtact acctcgaggc ggtgcgcgag caccgcggtg
      661 gcctggccca tatcgtcgac gttgccgagc acagcctggg cgaactcggc tactggccgc
      721 tgtccagcgc gcgaccgctg caggcagtgc cggttccggt gccggaaccg gccgcggctg
      781 cggcgcccgc gccggacgcc gcggtgaacg acgtgccgtt gtcggaaacc gtcagcctgt
      841 accccggcag cgatgcggcc gacctgctgg cggtaccgga gaccccgtcg ccgatgccga
      901 cccacgacgt cgacggcctg cgctatgccg aaaccgtggc ggacatggtg ccggcggcgg
      961 ttgccgctgg cgacgacgcc gactggatcg agatcgagga ggaggtcgag gaacaggtgc
     1021 cggtggctgg cgcgccgggc aacgcgttcc gcttcgacca gtccgccgag gacatcgacg
     1081 acgacatccg cgagatcttc ctcgaagaga tgcaggagga gatcgacaac ctgcgcgcgg
     1141 gggtcggcgc gtggctggcc gagccggaac ggctcgacac gctcaccccg atccggcggt
     1201 cgttccacac cctgaagggt tccggccggc tggtcggcat cgccgcgctc ggtgagttcg
     1261 cctggcgcgt cgaggacatg ctgaaccgcg tgctcgacca cacgatcgag ccgcattccg
     1321 gcgtgcaggc gctggtgcag cacgcgattg ccgccctgcc gcaactgctc gcctcgctca
     1381 agggtgaggg tgcgccgacc gcgccgatcg acgcgatcat gcagaccgcg agcaagctcg
     1441 ccgcgggcgc cgccgccgca cgcatcgagg attgcccgcc accgatgctg gaaaccgtgc
     1501 gccgcaaggt gcgtcgtcgc gtaccgcgcg ccgctgccgc cgcgatcccg acggccgcgg
     1561 tcaccgatgc acagagtgcg gccgccgccg ttcctgcggc gccggccgag atgctgccgg
     1621 tttcgccgtt gccggcggtc gatcccgtgc tgctggaaat cctgcgcagc gaggtcggcc
     1681 agtacctgca agccatccgt gcggcgctgg ccggacaggc cggcgagctg acggtggatg
     1741 agccgctgtt gcgcgccgtg cacaccatgc atggcgcgat cgcgatggtc gatatcccgt
     1801 tcctgaccag gctgctgtcg ccgagcgaga gcctgctcaa gcgcctgcgt gccgccgacc
     1861 tgccgctgcc gccggaaggc gtggcgctgc ttgcgcgcgc cgccgatgcg gtcgagcaga
     1921 ccctggccca gttcgatgct gctgtgcccg cgctgccgga agtggatgcg ctggccgccg
     1981 aggttgcggc gctgcgcgac cgctaccccg aggccaaggc gccgcacttt gccgtcgagc
     2041 caccggccgg cgatgccgaa acccaggtgc ccgaccacgc ggcggaggac gccaccccac
     2101 cgccgccggt ggtaccggag cgtctgccgg aaagcgccga gcacgacgac tacacccgcg
     2161 aactgatcgc ggcgctcggc gcgttcgagc ccgatgcgcc ggcgccgatc gagccggcaa
     2221 caaccgaacc cgctgcgcag tcggccggtg cggagcctgc cgctgccgag cgggctgcgg
     2281 cggaacaggc tgccgccgag cgggcggaaa ccgagcgtgt tgccgccgag caggccgaag
     2341 ccgaacggct ggcggccgag caagcacagg cggaacagga ggctgccgag cgggaagcgg
     2401 ccgaacggcg cgaagccgaa cgtgcacagg ccgaacagga gcgcgcccgc caggcgcagc
     2461 ttgccgagga acgtgccgcc cgcgaggctg ccgagttgca gatgcgcgcg gccgccgagc
     2521 aggccgccgc cgaacaggcg cggcgtgccg cggaacaggc ggccgcgacc gat
//
LOCUS       DASSVL010000177         2858 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_992821, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000177 DASSVL010000000
VERSION     DASSVL010000177.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2858)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2858)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2858
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_992821"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..248
                     /locus_tag="VFM52_03015"
     CDS             <1..248
                     /locus_tag="VFM52_03015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007804588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="secretion protein HlyD"
                     /protein_id="HET8764168.1"
                     /translation="FVGTIKPGMAAEVVANDDAENGHWRAHVLRVGEVYGPATLENDP
                     QIRANARTVECVLAFDRPEQQLRIGQRVIVRFLRAKS"
     gene            416..1252
                     /locus_tag="VFM52_03020"
     CDS             416..1252
                     /locus_tag="VFM52_03020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008434338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HET8764169.1"
                     /translation="MIQPTEFFFEGGASGVLLIHGLTGTPMEMKLLGKGLNHAGFTVD
                     GMQLAGHCGNVEDLLATGWHDWYASVERAADALRAKVDHLFVGGLSMGALLALKLAAD
                     HPDYVAGVGGYGATFRYDGWSIPRLARLSFMLPLLKQLGIGRNRSFMEQPPYGIQDER
                     LRAQVSSAMLGGDSAAAGLPGNPWYSLAELHSLASTVRRQLPQVTSPCLVAHASEDDV
                     ASLRNAELVMREVSAPAELLLLDHSYHMITIDRDRRTLIERSAAFFDRIAAADTRQCV
                     AA"
     gene            1254..1628
                     /locus_tag="VFM52_03025"
     CDS             1254..1628
                     /locus_tag="VFM52_03025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008210923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HET8764170.1"
                     /translation="MPTGGISPLVVLLWVLNILFDTTGQLAFKAAAGDERAGDGIARW
                     KYMASRPWLWLGIGCYVFEFLVWIAFLSLVPLSEGVLLGSINIVAIMVAGRFLFAERL
                     TRLRVTGIALVTLGVAVVGLAG"
     gene            1625..2041
                     /locus_tag="VFM52_03030"
     CDS             1625..2041
                     /locus_tag="VFM52_03030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007804583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HET8764171.1"
                     /translation="MKHGWFYLIGFALLMSFDTLAQVSFKYAGDRALPVSADIAWLLR
                     VFGAPWIYGAIIGYIGSFFTWMSLLKYAPIGPAFAASHLEVVSVMLLSVWLFNEHLTP
                     ARLIGAALIIAGIICLGFAESREAPVETEPVDPNPA"
     gene            2052..>2858
                     /locus_tag="VFM52_03035"
     CDS             2052..>2858
                     /locus_tag="VFM52_03035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008434334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DegT/DnrJ/EryC1/StrS family aminotransferase"
                     /protein_id="HET8764172.1"
                     /translation="MLPRRRYELPPTAGLPPRWRDLRPGPAALAETLAAQLRTPPLIA
                     TCSGSAALMIALATLAERQPMRKRVVIPAYTCPLVPLAIHQIGLTPVACDVRYGHFDF
                     DPHALRAACDERTLAVLPTHLGGRIADVDDALAAANNVGAFVIEDAAQAVGAQRHGES
                     VGLAGDLGFFSLAVGKGLTTYEGGLLATPDPDLHERLARTAARIAPFKLGWELRRSLE
                     LIGYTALYRPRGLRLAYRNPLRRALRAGDPVAAVGDDFAPPLPLHTLGRWR"
BASE COUNT          400 a         1045 c          956 g          457 t
ORIGIN      
        1 gcttcgtcgg cacgatcaag cccggcatgg cggccgaagt cgtcgccaac gacgacgccg
       61 aaaacggcca ctggcgtgca cacgtgctgc gcgtcggcga ggtgtatggc ccggccacgc
      121 tggaaaacga cccgcagatc cgcgccaatg cacgcacggt cgaatgcgtg ctcgccttcg
      181 accgacccga gcagcagttg cgcatcggcc agcgggtgat cgtgcggttc ctgcgcgcca
      241 aatcgtaacg gcgtgtcagg ccgaagccgg gcccacgagc gcgcggcatt tgcggggcgg
      301 gtttcaaccc ggcgcacagg ccgcgcccgc cacgcgaaag ggtgacgaaa ccgcttgctg
      361 cgaggcttgc gtggatggcc ggcacgccgg cagccacggt tatgcgacaa gcctcgtgat
      421 ccagcccacc gagttctttt tcgaaggcgg cgccagcggc gtgctgctga tccacggcct
      481 gaccggcacc ccgatggaaa tgaagctgct cggcaagggc ctgaaccatg ccggcttcac
      541 cgtcgacggc atgcagcttg ccggccactg cggcaacgtc gaggacctgc tcgcgaccgg
      601 ctggcacgac tggtacgcca gcgtcgagcg tgccgccgac gccctgcgcg ccaaggtcga
      661 tcacctcttc gtcggcggtc tgtcgatggg cgcattgctc gcgctcaagc ttgccgccga
      721 ccacccggat tacgtggccg gcgtcggcgg gtacggcgcc acgttccgct acgacggctg
      781 gagcattccg cgcctggcgc ggctctcgtt catgctgcca ctgctgaagc agctcggcat
      841 cggccgcaac cgaagcttca tggaacagcc gccgtacggc atccaggacg agcgcctgcg
      901 cgcgcaggtc agcagcgcga tgctcggcgg cgacagcgcg gccgccggcc tgcccggcaa
      961 cccgtggtac tcgctggccg aactgcactc gctggccagc accgtgcgcc ggcagctgcc
     1021 gcaggtcacc tcgccctgcc tggtcgcgca cgccagcgag gacgacgtcg ccagcctgcg
     1081 caacgccgag ctggtgatgc gcgaggtcag cgcaccggcg gagctgctgc tgctcgacca
     1141 cagctatcac atgatcacga ttgaccgcga ccggcgcacg ctgatcgaac gctcggccgc
     1201 cttcttcgat cgcatcgccg cggcggacac ccgccagtgc gtggccgcct gacatgccca
     1261 ccggcggcat ttccccgctc gtcgtcctgc tctgggtgct gaacatcctg ttcgacacca
     1321 ccggccagct cgccttcaag gcagccgccg gcgacgagcg tgccggcgac ggcattgcgc
     1381 gctggaagta catggccagc cgcccgtggt tgtggcttgg catcggctgc tacgtgttcg
     1441 agttcctggt gtggatcgcg ttcctgtcac tggtgccgct gtccgaaggc gtgctgctcg
     1501 gctcaatcaa catcgtcgcg atcatggtcg ccgggcgttt cctgttcgcg gaaaggctca
     1561 cccgcctgcg cgtcaccggc atcgcgctgg tcacgctcgg cgtcgccgtc gtggggctgg
     1621 ccggatgaag cacggttggt tctacctgat cggtttcgcg ctgctgatga gcttcgacac
     1681 gctcgcgcag gtcagtttca aatacgctgg cgaccgcgcg ctgccggtca gcgcggatat
     1741 cgcctggctg ctgcgggtgt tcggtgcgcc gtggatctac ggcgcgatca tcggctacat
     1801 cggttcgttc ttcacctgga tgagcctgct gaaatacgcg ccgatcggcc cggccttcgc
     1861 cgcctcgcac ctggaagtgg tgtcggtgat gctgctcagc gtgtggctgt tcaacgagca
     1921 cctgacgccg gcgcgcctga tcggtgccgc gctcatcatc gccggcatca tctgcctggg
     1981 cttcgcggaa agccgcgagg cgccggtcga aaccgagccc gtcgatccca acccggcctg
     2041 acgccgcccg catgctgccg cgccgccgct acgaattgcc gccgaccgcc gggttgccgc
     2101 cgcgctggcg cgatctccgg cccggcccgg cggcgctcgc cgaaacgctg gccgcccagt
     2161 tgcgcacgcc gccgttgatc gccacctgtt ccggcagcgc ggcgctgatg atcgcgctcg
     2221 ccacgctggc cgagcgccag ccaatgcgca agcgcgtggt gatcccggcg tatacctgcc
     2281 cgctggtgcc gctggcgatc caccagatcg ggttgacgcc ggtggcgtgc gacgtgcgtt
     2341 acggccactt cgatttcgat ccgcacgcgc tgcgcgccgc ctgcgacgag cgcacgctgg
     2401 ccgtgctgcc gacgcacctc ggcggccgca tcgccgacgt cgatgacgcg ctcgccgcgg
     2461 ccaacaacgt cggcgcgttc gtcatcgagg acgcggcgca ggccgtcggc gcgcagcgcc
     2521 acggcgaaag cgtcgggctg gctggcgacc tcggcttctt cagcctcgcc gtcggcaagg
     2581 ggctgacaac gtacgaaggc ggcctgctgg ccacgcccga ccctgacctg cacgagcgcc
     2641 tcgcgcgcac cgccgcgcgc atcgcgccgt tcaagctcgg gtgggagctg cgccgcagct
     2701 tggaactcat cggctacacc gcgctgtacc gcccgcgcgg cctgcgcctc gcctaccgca
     2761 acccgctgcg ccgcgcactg cgcgctggcg acccggttgc cgccgtgggc gacgatttcg
     2821 cgccgccgct gccgctgcac acgctcggcc gctggcgg
//
LOCUS       DASSVL010000178         3077 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_851780, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000178 DASSVL010000000
VERSION     DASSVL010000178.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3077)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3077)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3077
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_851780"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..965)
                     /locus_tag="VFM52_03040"
     CDS             complement(<1..965)
                     /locus_tag="VFM52_03040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017463949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HET8764173.1"
                     /translation="MRVRLEDVARATGVSPKTVSRVLNEEPSVSAATRQRVLAAMKSM
                     NYRPSPAARGLAGNRSFLIAMLYDNSNNPASTYLAEIQNGVLDACEANRYSMMACPLR
                     TLGKDFIRRLDALVVDHHIDGVVLTPPLTDGRKLLARLREHKVAFASISPLHGKGTLG
                     VCMDETRAASDLVAHLIGLGHRRIAHICGTASHGASRWRRVGYESALVAAGLAVDPQY
                     VVPGEFTFGSGVTAARQLFALPQRPSAIFAANDDMAAGVMWAANAAGFAVPRDLSVCG
                     FDDTPMATQLWPPLTTVHQPSREMGRIATLQLLGQLRGLDQGQLV"
     gene            complement(1034..1717)
                     /locus_tag="VFM52_03045"
     CDS             complement(1034..1717)
                     /locus_tag="VFM52_03045"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007810337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HET8764174.1"
                     /translation="MPRRDTAFLFDLDGTLVDSVYQHVLAWKQALDAEGVDLPVWRIH
                     RRVGMSGGLFTHILLRETGQEIDEARRARLYEAHAAAFNRLHAQGAIKPLPGARELLA
                     ALTARDIPWAIATSGQLRTAIHNLEALGVDPAKVPVVTRDDVRHAKPDPDLFLAAAAR
                     LGFDIQRALVVGDSVWDMLAASRARALGIGLLSGGYGEAELERAGALRVYEDPSDLLR
                     HIDEVASRN"
     gene            complement(1780..2793)
                     /gene="glk"
                     /locus_tag="VFM52_03050"
     CDS             complement(1780..2793)
                     /gene="glk"
                     /locus_tag="VFM52_03050"
                     /EC_number="2.7.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007513773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004340 - glucokinase activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucokinase"
                     /protein_id="HET8764175.1"
                     /translation="MSHGHSPILLADLGGTNVRFAIAGPNTATPLVMDSIRRYRVAEF
                     PSLGDAAQQYFSDTGCTATQAVIAAAGRIAGGETVKVTNNPWAIAAHVLRAKLGMTTV
                     QLVNDFAAQSMSVPLLASGALTPVGNVPAPRLGLPQPQTFVVMGPGTGLGVAGLLWRD
                     ERWIVLESEGGHAGFAAHTTEDVEILHRLNARFGRVSNERMICGNGLVNLYLALADIA
                     GQPAEDYTPPDITARAENGSDPLCVRTVETLAGIFGSVAGDLVLSLGGWDGVYLTGGV
                     LPFLLPWLHRGGFRERFEAKGRFRETMERVPTLAIVHPEPGLLGAAAIALRNAGCSLT
                     PPY"
BASE COUNT          451 a         1039 c         1140 g          447 t
ORIGIN      
        1 tgcaccagct ggccctggtc gaggccgcgt agttgcccga gcagctgcag ggtcgcgatg
       61 cggcccattt cgcggctggg ctggtggacg gtggtgagcg gcggccacag ctgggtcgcc
      121 atcggcgtgt cgtcgaagcc gcagaccgac agatcgcggg gcaccgcaaa gccggctgcg
      181 ttggccgccc acatgacgcc ggcggccata tcgtcgttgg cggcgaagat cgcgctggga
      241 cgctgcggca gggcgaacag ctggcgcgcc gcggtaaccc ccgagccgaa ggtgaactca
      301 cccggcacga cgtactgcgg gtcgaccgcc agtcccgcgg cgaccagcgc ggattcgtag
      361 ccgacccgcc gccagcggct ggcgccgtgg ctggcggtgc cacagatgtg ggcgatgcgc
      421 cgatggccga ggccgatgag gtgggccacc aggtccgacg cggcgcgggt ctcgtccatg
      481 cagacgccca gcgtgccctt gccgtgcagc ggggagatgc tggcgaacgc caccttgtgc
      541 tcgcgcagcc gggccagcag cttgcggcca tcggtgagcg gcggggtcag caccacgccg
      601 tcgatgtggt ggtcgaccac cagcgcatcg agacggcgga tgaagtcctt gccgagggtg
      661 cgcagcggac aggccatcat gctgtagcgg ttcgcctcgc acgcatcgag cacgccgttc
      721 tggatctcgg ccaggtaggt cgaggccggg ttgttgctgt tgtcgtagag catcgcgatc
      781 aggaacgacc ggttgccggc caggccgcgc gcggcggggc tggggcggta gttcatcgac
      841 ttcatcgccg cgagcacccg ctggcgcgtg gcggcgctga ccgagggctc ctcgttgagc
      901 acgcgggata ccgtcttggg cgagaccccc gtcgcccgcg ccacatcttc cagccgcacc
      961 cgcatgatgg ttcccgtgtc cgtatcgcgt gtcgggacta tgcaggcgcc cggcccttgg
     1021 tgacaagcgc ggctcagttg cgcgacgcca cctcgtcgat gtgcctgagc aggtcggacg
     1081 ggtcttcgta cacgcgcagc gcgccggcgc gttcgagttc cgcctcgccg tagccgccgg
     1141 agagcaggcc gatgccgagc gcgcgggcgc ggctggccgc cagcatgtcc catacgctgt
     1201 cgccaacgac cagcgcgcgc tggatgtcga aacccagccg cgcggcggcg gcaaggaaca
     1261 ggtcggggtc gggcttggcg tggcgcacgt cgtcgcgggt caccaccggc actttcgccg
     1321 gatcgacgcc gagcgcttcg aggttgtgga tcgccgtgcg cagctggccg ctggtggcga
     1381 tcgcccacgg gatgtcgcgc gcggtgagcg cggccagcag ctcgcgcgcg ccgggcagcg
     1441 gcttgatcgc gccctgcgca tgcaggcggt tgaacgctgc ggcgtgcgcc tcgtacaggc
     1501 gcgcgcggcg cgcctcgtcg atctcctgcc cggtttcgcg caggaggata tgggtgaaca
     1561 gcccgccgct catgcccacc cgccggtgga tgcgccacac cggcagatcc acgccctcgg
     1621 catccagcgc ctgcttccag gccagcacgt gctggtagac gctgtcgacc agcgtgccgt
     1681 cgagatcgaa caggaaagcg gtatcgcgac gtggcatggc ggctccggct ggaaacgggt
     1741 cagggatggt gacgcacacg gtgtggcgcg tgcgtgacct cagtacggcg gcgtcaggct
     1801 gcaaccggcg ttgcgcaacg cgatggcggc ggcaccgagc aggccgggct cggggtgcac
     1861 gatggcaagc gtgggcacgc gctccatggt ttcgcggaag cggcccttgg cctcgaagcg
     1921 ttcgcggaac ccgccgcggt gcagccacgg cagcaggaat gggagcacac cgccggtcag
     1981 gtacacgccg tcccagccgc cgagcgagag caccaggtcg ccggcgacgc tgccgaagat
     2041 gccggccagg gtctccaccg tgcgcacgca cagcggatcg ctgccgttct cggcgcgcgc
     2101 ggtgatgtcg ggcggggtgt aatcctcggc cggctggccg gcgatgtcgg ccagcgcgag
     2161 gtacaggttc accaggccgt tgccgcagat catgcgctcg ttcgacaccc ggccgaagcg
     2221 cgcgttgagg cggtgcagga tctccacgtc ctcggtggtg tgcgcggcga agccggcgtg
     2281 gccgccttcg ctttccagca cgatccagcg ctcgtcgcgc cacagcaggc cggctacgcc
     2341 gagcccggtg cccggaccca tcaccacgaa ggtttgcggc tgcggcaagc cgagccgcgg
     2401 tgccggcacg ttgcccaccg gcgtcagcgc accggacgcc aagagtggca ctgacatgct
     2461 ttgcgcggcg aagtcattga ccagttgcac ggtggtcatg ccaagtttcg cgcgcagcac
     2521 gtgcgccgcg atcgcccacg gattgttggt gactttcacc gtctcgccac cggcgatgcg
     2581 cccggcggcc gcgatgacgg cctgcgtggc cgtgcagccg gtgtcggaaa agtactgctg
     2641 cgcggcgtcc cccagcgagg gaaattccgc cacccggtaa cggcggatgc tgtccatcac
     2701 cagcggcgtc gcggtgttcg ggccggcgat ggcgaaacgc acgttggtgc cgccgaggtc
     2761 ggcaagcagg atgggggaat gaccgtggga catcgggggg aacctgggag gcggcgcacg
     2821 agcacaagcg gtaagcgtgc ctcgtcaggc cggtgcgcgt ccactatgga tgcgaaagac
     2881 gggcgtccga acgggcggcg gcaatgccgt cctggccggc ctgcgcggcg cttttcagcc
     2941 gctgcggccg tgccaggcga atgtggaacc actggtcggc acgatgcggc gcactggtct
     3001 gcatcgcatg cacgagcgac tgcacgcggc gcgccggcag ccggcacaac cccgttcacc
     3061 ggctgccgcc ccatcgg
//
LOCUS       DASSVL010000179         2056 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_145470, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000179 DASSVL010000000
VERSION     DASSVL010000179.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2056)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2056)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2056
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_145470"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..939
                     /locus_tag="VFM52_03055"
     CDS             <1..939
                     /locus_tag="VFM52_03055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014161878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="COX15/CtaA family protein"
                     /protein_id="HET8764176.1"
                     /translation="ARRRRHGIVRVAVAALAVAASIPLYMRGEHVAAVLCAAAGELLL
                     LGNALQWSFAQGGAAASGAGTGAGTDAGIGATAADGPVRASPLPAIASLTLAVIVFQA
                     LLGMWTVTWLLKPIVVMGHLLGGLATFALLAWLAWRATDRPVRVPDSALLRRLLAIGL
                     VLLVVQIALGGWTSSNYAALSCGTDFPKCVGQWWPPHDFREGFVLWRGIGVDYEGGVL
                     DGAARIAIHMAHRMMAVVVFLYLGWLAIRLLRSPGLRGFGGLLGVLLLAQVSLGIANV
                     KLALPLKVAVMHNAGAALLLFVLVTLLARVRAPVQG"
     gene            945..1883
                     /locus_tag="VFM52_03060"
     CDS             945..1883
                     /locus_tag="VFM52_03060"
                     /EC_number="2.5.1.141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007514054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008495 - protoheme IX farnesyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0048034 - heme O biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heme o synthase"
                     /protein_id="HET8764177.1"
                     /translation="MAARPSTARKPDSVLRQYWSLTKPRVVALIVFTAAIGMFLAVPG
                     LPPLRESVLGFLGIWLAASSAAAINQLLDSRIDAKMARTSWRPLVSGTLTSRQALVFA
                     LVLAAISMAVLVLWVNLLTAVLTFLSLIGYAVVYTVFLKRATPQNIVIGGIAGAAPPA
                     LGWAAVTGELHHHALLLVLIIFVWTPPHFWALAIFRRDDYARAMVPTLPVTHGVEYTR
                     WQILLYTVLLVIVTVLPWATGMSGLFYLGGALVLGAVFLWYAWKLLDPPDEFYAMRVF
                     NYSIVYLMALFAFLLVDHWLLPLLQPAAGLEFVPAG"
BASE COUNT          214 a          704 c          757 g          381 t
ORIGIN      
        1 gcgcggcgac gccggcacgg catcgtgcgc gtggcggtgg ccgcgctggc ggtggcggcc
       61 tcgatcccgc tgtacatgcg tggcgagcac gtcgcggccg tgctgtgcgc ggcggcgggc
      121 gaactgctgt tgctgggcaa cgcgctgcag tggtcgttcg cgcagggtgg tgcggcggcc
      181 agcggcgcgg gcacgggcgc gggcacggac gcgggcattg gcgcgacggc tgccgacggc
      241 ccggttcgcg cctcgccgct gccggccatc gcatcgctga cgctggcggt gatcgtgttc
      301 caggcgctgc tcggcatgtg gaccgtgacc tggctgctca aacccatcgt cgtgatgggc
      361 cacctgctcg gcggcctcgc gacgttcgcg ctgctcgcgt ggctggcgtg gcgcgcgacc
      421 gaccgtccgg tacgcgttcc ggattcggcg ctgctgcggc gcctgctcgc gatcggcctc
      481 gtgctgctcg tggtgcagat cgcgctcggc ggctggactt cgtcgaacta cgcggcgctg
      541 tcctgcggca ccgacttccc gaagtgcgtg ggccagtggt ggccgccgca cgacttccgc
      601 gagggcttcg tcctgtggcg cggcatcggc gtcgactacg aaggcggcgt gctcgacggc
      661 gccgcgcgca tcgccatcca catggcccac cggatgatgg cggtcgtcgt gttcctctat
      721 ctcggctggc tcgcgatccg cctgctgcgc tcgccgggcc tgcgcggctt cggcgggctg
      781 ctcggcgtgc tgctgctggc gcaggtgtcg ctgggcatcg ccaacgtcaa gctcgcgctg
      841 ccgctgaagg tggcggtgat gcacaacgcg ggcgccgcgc tgctgctgtt cgtgctggtg
      901 acgctgctcg cgcgcgtgcg cgcgccggtg cagggctgac gcgcatggcc gcgcgcccgt
      961 ccaccgcccg caagccggac tccgtgctgc gccagtactg gagcctgacg aagccgcgcg
     1021 tggtcgcgct gatcgtgttc accgccgcca tcggcatgtt cctggcggtg ccggggctgc
     1081 cgccgttgcg ggaatcggtg ctcggcttcc tcggcatctg gctggcggcc tcgagcgcgg
     1141 ccgcgatcaa ccagctgctg gactcgcgca tcgacgcgaa gatggcgcgc acgtcgtggc
     1201 gcccgctggt ctcgggcacg ctgacctcgc gccaggcgct ggtgttcgcc ctggtgctgg
     1261 cggcgatctc gatggcggtg ctggtgctgt gggtgaacct gctgaccgcg gtgctcacgt
     1321 tcctgtcgct gatcggctat gcggtggtct acaccgtgtt cctcaagcgc gcgacgcccc
     1381 agaacatcgt gatcggcggc atcgccggcg ccgcgccgcc cgcgctgggc tgggccgccg
     1441 tcaccggcga actgcaccac catgcgctgc tgctggtgct gatcatcttc gtgtggacgc
     1501 cgccgcattt ctgggcgctc gccatcttcc gccgcgacga ctacgcccgc gcgatggtgc
     1561 cgacgctgcc cgtgacgcac ggcgtcgagt acacgcgctg gcagatcctg ctgtacacgg
     1621 tgctgctggt catcgtgacc gtgctgccct gggccacggg catgagcggc ctgttctacc
     1681 tcggcggcgc gctggtgctc ggcgcggtgt tcctctggta cgcgtggaag ctgctcgatc
     1741 cgccggacga gttctacgcg atgcgggtgt tcaactactc gatcgtgtac ctgatggcgc
     1801 tgttcgcctt cctgctggtg gaccactggc tgctgccgct gttgcagccg gccgcagggc
     1861 tggagttcgt gccggcgggg tagtgcctgc ttcgccgttt cgatgggcgg ggacgctgca
     1921 gcgccgccga tttcctcgtt cattcaggca aggccgcgca ctggcgcgga atccggccgt
     1981 gcatatccgc gaatccgcgc cgccagcagg tgcttatcgt ggaatccgcg gtgtcgaacc
     2041 ggcaaatgcc gtggat
//
LOCUS       DASSVL010000180         2129 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_314446, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000180 DASSVL010000000
VERSION     DASSVL010000180.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2129)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2129)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2129
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_314446"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..579)
                     /locus_tag="VFM52_03065"
     CDS             complement(<1..579)
                     /locus_tag="VFM52_03065"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019464478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HET8764178.1"
                     /translation="MVQRFGSLRALSFRLLAGHALLVLGASALAQAPATQQLPPPVST
                     GDIVQPLLPAQLQDFDAYMADTLKTFEVPGIAVAIVKNGKVVMERGFGVKELGKPDPV
                     DAHTLFAIASNTKAFTAAALQQLADAGKLDMDDRVIDHLPWFRMSDPYVTHEMRIRDL
                     LAHRSGLSLGAGDLLYWPPSSYTTREVVERLDK"
     gene            714..1505
                     /locus_tag="VFM52_03070"
     CDS             714..1505
                     /locus_tag="VFM52_03070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007513061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HET8764179.1"
                     /translation="MNTLAEWIALHSLLLWALLLLLALLAGDLAWRRNARWQRRAALL
                     GQAPTMLRWRTGLLLCMVLGLFFGGLALAISGQPTTGLDGFDASLAASLRAHVPVPAL
                     RVIAAITHLGDTLWVASAAAVVLLILLLRRQWTLAASWSVALLGILPINGGLKALFRR
                     ARPMHDHGFIVEPGWSFPSGHAFGAMVFYGMLAYVLLRLTPRFHRAVIAGAVLMVGVI
                     GVSRILLQVHYLSDVMAGYAIGAAWLVLCMGTSEWLRHQPGGATP"
     gene            1502..>2129
                     /locus_tag="VFM52_03075"
     CDS             1502..>2129
                     /locus_tag="VFM52_03075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007082257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF72 domain-containing protein"
                     /protein_id="HET8764180.1"
                     /translation="MNKHGTIRVGIGGWTYAPWRNNFYPTKLVQRRELEYASRQLRAI
                     EINGTFYGAQKPATYAKWAAETPDGFVFSLKAPRYITEGKRLADTGKGIGGFIHGGLV
                     EMGDRLGPILWQLPPSRRFDANDVAAFLDALPRELNGHPLRHVLEVRHPSFACAPYVE
                     LARARGVPTVFTDSTEYPSLADLTGDFAYARLMRSVDGIPTGYAPDALD"
BASE COUNT          318 a          753 c          721 g          337 t
ORIGIN      
        1 cttgtccaac cgctccacca cttccctggt ggtgtacgag gacggcggcc agtacagcag
       61 atcacccgcg cccagactca ggccactgcg gtgcgccagc aggtcgcgaa tgcgcatctc
      121 gtgcgtcacg tacggatcgg acatgcggaa ccagggcagg tggtcgatca cgcggtcgtc
      181 catgtccagc ttgcccgcgt cggccagctg ctgcagcgcc gcggcagtga aggccttggt
      241 gttggaggcg atcgcgaaca gcgtgtgcgc gtcgaccggg tccggcttgc ccagctcctt
      301 cacgccgaag ccgcgctcca tcaccacctt gccgttcttg acgatggcca ccgcgatgcc
      361 gggcacctcg aaggtcttca gcgtatccgc catgtaggcg tcgaaatcct gcagctgcgc
      421 cggcagcagc ggctgcacga tgtcgccggt cgataccggc ggcggcagct gctgcgtggc
      481 cggagcctgc gccagcgccg acgcgccgag gaccagcaag gcatggccgg ccaacagccg
      541 gaacgacagc gcacgcaagg acccgaatcg ctggaccatc gaagttctcc cccagggcga
      601 cgacccgcgc actatcgcga gaaatcgccc gcaaggccag cccggcatcc aactcgacgc
      661 cggccgcgca agccgcgatc atgcgcggat cggcaagcga aacgaggatc gcaatgaaca
      721 cgctggcgga atggattgcg ctgcactccc tgctgctgtg ggcgctgctg ttgctgctgg
      781 ccttgctggc cggcgacctg gcctggcggc gcaacgcgcg ctggcagcgg cgcgctgcgc
      841 tgctgggcca ggcgccgacg atgctgcgct ggcgcacggg cctgctgctg tgcatggtgc
      901 tggggttgtt cttcggcggc ctcgcgctgg cgatttccgg ccagccgacg accggcctgg
      961 acggcttcga cgccagcctc gccgccagcc tccgtgccca tgtgccggtg ccggcgctgc
     1021 gcgtgatcgc cgccatcacc catctgggcg acaccttgtg ggtcgccagc gcggcggccg
     1081 tggtgttgct catcctgctg ctgcgccgcc agtggacgct ggcggcgagc tggagcgtgg
     1141 ccctgctcgg catcctgccg atcaacggcg ggctgaaggc gctgttccgc cgtgcccgcc
     1201 cgatgcacga ccacggtttc atcgtcgagc cgggctggag tttccccagc gggcacgcgt
     1261 tcggcgcgat ggtgttctac ggcatgctgg cctacgtgct gctgcggctg acgccgcgct
     1321 tccatcgcgc ggtcatcgcc ggcgccgtgc tgatggtcgg ggtgatcggc gtcagccgga
     1381 tcctgctgca ggtgcattac ctcagtgacg tgatggccgg ttatgccatc ggcgcggcgt
     1441 ggctggtgct gtgcatgggc acctccgaat ggctgcgcca ccagcccggc ggggccacgc
     1501 catgaacaag cacggcacga tccgcgtcgg catcggcggc tggacctacg caccgtggcg
     1561 caacaacttc tacccgacga aactcgtgca acggcgcgag ctggaatacg ccagccgcca
     1621 gctgcgcgcg atcgagatca acggcacctt ctacggcgcg cagaaaccgg ccacgtacgc
     1681 gaagtgggcg gcggaaacgc cggacggttt cgtcttctcg ctgaaggcgc cgcgctacat
     1741 caccgaaggc aagcggctgg ccgacaccgg caagggcatc ggcggattca tccacggcgg
     1801 cctcgtcgag atgggcgacc ggctggggcc gatcctgtgg cagctgccgc cgtcgcgacg
     1861 gttcgatgcc aatgacgtgg cggccttcct ggacgccctg ccgcgcgaat tgaacgggca
     1921 ccctctgcgc cacgtgctgg aagtgcgcca ccccagcttc gcctgcgcgc cgtacgtgga
     1981 actggcccgc gcacgaggcg tgcccaccgt gttcaccgac tcgaccgagt acccgtcgct
     2041 ggccgatctc accggcgact tcgcttatgc gcgcttgatg cgcagcgtcg acggcatccc
     2101 gaccggctac gcccccgacg cgctcgacc
//
LOCUS       DASSVL010000181         3558 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1374403,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000181 DASSVL010000000
VERSION     DASSVL010000181.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3558)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3558)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3558
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1374403"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..732
                     /locus_tag="VFM52_03080"
     CDS             <1..732
                     /locus_tag="VFM52_03080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013536182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxo acid dehydrogenase subunit E2"
                     /protein_id="HET8764181.1"
                     /translation="GAMPAPMAAPQRSTVSQSGRPMRTTPPTVAATGQPEQLKGVRRN
                     MARVMADARDRVVQTTLVDDADLHAWLGKQDITARTIRAIVTACKAEPGLNAWFDDAN
                     LTVTKHPQVDLGIAVDTPDGLFVPALRNAHLLDARGVREGINRLRAQVEDRSIPASEL
                     SGYTISLSNFGMFAGRYGTVVVVPPCVAIVGVGKLSHDVVAVMGGIEVHRRLPISLTF
                     DHRACTGGEAARFLKALLDDLALPN"
     gene            complement(880..1212)
                     /locus_tag="VFM52_03085"
     CDS             complement(880..1212)
                     /locus_tag="VFM52_03085"
                     /inference="COORDINATES: protein motif:HMM:NF017355.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HicB family
                     antitoxin"
                     /protein_id="HET8764182.1"
                     /translation="MNTMTCKGFTARIEFDERGAIFVGRLLGVSDMVSFHGEAVNELR
                     GAFEEAVDDYIETCRKIGKKPEKPVSGNMMLRVPPEVHLGALTVAEARGQSLNQWAAE
                     VLREAAHV"
     gene            complement(1209..1463)
                     /locus_tag="VFM52_03090"
     CDS             complement(1209..1463)
                     /locus_tag="VFM52_03090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0003729 - mRNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HicA family
                     toxin"
                     /protein_id="HET8764183.1"
                     /translation="MNSKQRGTLAAVFATPTHKDVEWPVVESPFKAAGCAVVEGDGSR
                     VRFVFAQHVATSHRPHPATEAKAYQVEQAREFLMLIGATP"
     gene            1571..2032
                     /locus_tag="VFM52_03095"
     CDS             1571..2032
                     /locus_tag="VFM52_03095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014159732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1456 family protein"
                     /protein_id="HET8764184.1"
                     /translation="MINNDILRNVRYMLDLPDGRLGAITALAGLEVAQADFDAYLKRD
                     DEPGYRDCPDTVMAHFLDGLIVYRRGRDEHRPAPPVAKRVGNNLVLKKLRVAFELRDE
                     DLHAILEADDFPLSKSELSALFRKPDHPNYRPCGDQLLRHFLRGLTRRLRP"
     gene            2089..2577
                     /locus_tag="VFM52_03100"
     CDS             2089..2577
                     /locus_tag="VFM52_03100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018971835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF456 domain-containing protein"
                     /protein_id="HET8764185.1"
                     /translation="MLFDVAFYTLGALLIVGGLAGTILPALPGIPMVFGGIWLIAAVD
                     NYQHLGLGWLVFIGALGALGVLVDFVAATLGAKRVGASRRALWGASLGTVVGMFFGIP
                     GILVGPFAGALIGELSSGTSVLRSTHVGVATWLGLLAGALVKLVISLVMVGLFGVAML
                     LG"
     gene            2717..3160
                     /locus_tag="VFM52_03105"
     CDS             2717..3160
                     /locus_tag="VFM52_03105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014160164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YeeE/YedE thiosulfate transporter family
                     protein"
                     /protein_id="HET8764186.1"
                     /translation="MTSFTPVEGLVGGALIGLAVVMWLALYGRVTGISGILGDALFTH
                     EADGHGWRSLYLVGLVIGAGVFLAIRGHLPGTYFGVDLQDGWPLMLAAGLLVGFGTRL
                     GHGCTSGHGVCGLARLSKRSLVATLTFMAFGFLAASWLRGVLGPA"
     gene            3157..>3558
                     /locus_tag="VFM52_03110"
     CDS             3157..>3558
                     /locus_tag="VFM52_03110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018973052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YeeE/YedE family protein"
                     /protein_id="HET8764187.1"
                     /translation="MRNLVALLAGTLFGIGLGVSGMLDPGKVLGFLDLSAHWDPTLAF
                     VMGGAVLVALPAFRWARRAPRPLLTNAFCLPHRHVIDRRLVIGAAIFGVGWGLSGLCP
                     GPAVAALATLQWPVFGFVAAMIAGQWLADRVP"
BASE COUNT          505 a         1206 c         1208 g          639 t
ORIGIN      
        1 ggcgcgatgc cggccccgat ggcggcaccg caacgcagca ccgtctccca atccggcagg
       61 ccgatgcgca cgacgccgcc gacggtcgcg gcgaccggcc aacccgagca gttgaagggc
      121 gtgcgccgca acatggcccg cgtcatggcc gatgcgcgcg atcgcgtggt gcagaccacc
      181 ctcgtcgacg atgcggacct gcacgcctgg ctcggcaagc aggacatcac cgcgcgcacc
      241 atccgtgcca tcgtcaccgc gtgcaaggcg gagccggggc tcaacgcgtg gttcgacgac
      301 gccaacctca ccgtcaccaa gcacccgcag gtcgatctcg gcatcgccgt ggacaccccg
      361 gacggcctgt tcgtgccggc gctgcgcaac gcgcacctgc tcgacgcgcg cggcgtgcgc
      421 gagggcatca accgcctgcg cgcgcaggtg gaagatcgct cgatcccggc cagcgagctc
      481 agcggctaca ccatcagcct gtccaacttc ggcatgttcg ccggccgcta cggcaccgtc
      541 gtggtggtgc ccccgtgcgt cgccatcgtc ggcgtcggca agctcagcca cgacgtggtc
      601 gcggtgatgg gcggcatcga agtccaccgc cgcctgccga tcagcctcac cttcgaccac
      661 cgcgcctgca ccggcggcga agccgcccgg ttcctcaagg cgctgctgga tgatttggcg
      721 ctgccgaact gaaacacggc tgcgggtttc atgctgaaac aaacggggcg ccatttggcg
      781 ccccgttcta tttcactttg ccagacgcgc ccgcatcgga tcgggcccaa cgagcggcac
      841 gcgagcatgc gttgccctgc ccgcgccagc acattgcact caaacgtgag cggcttcgcg
      901 cagcacttcg gcagcccatt ggttcaggct ctgaccacgg gcctctgcga cggtcagggc
      961 gccaagatgc acctctggcg gaacgcgaag catcatgttg ccactgacgg gcttctccgg
     1021 ctttttgccg attttccggc acgtctcgat gtagtcgtcc actgcctctt caaacgcacc
     1081 acgcaattca ttcacggcct cgccatggaa cgaaaccatg tcgctgacgc caagcaggcg
     1141 gccaacgaaa atcgcgccgc gttcgtcgaa ttcaatgcgg gccgtaaagc ccttgcaggt
     1201 catcgtattc atggggttgc tccgatcagc atcaggaatt cgcgggcctg ttccacctgg
     1261 tatgccttcg cttccgttgc cggatgcggc cggtgggacg tcgctacatg ttgtgcaaac
     1321 acgaagcgga cgcgcgaacc gtcgccttcc accaccgcgc accccgcggc tttgaacggc
     1381 gactcaacga ccggccactc gacatccttg tgcgtcggcg ttgcaaatac agccgccaac
     1441 gtcccgcgct gtttgctgtt cacacttggc acaacggcgc ggcgtgcaat cgcgtgcgat
     1501 cataagttgc aatcatccag agcggaaagg ccgtcggcga gtgcgtggcc acgcccgata
     1561 caatccccac atgatcaaca acgacatcct gcgcaatgtg cgctacatgc tcgacctgcc
     1621 ggatggccgg ttgggggcga tcacggcatt ggcggggctg gaggtggcgc aggcggattt
     1681 cgatgcgtac ctcaagcggg acgacgagcc tggctaccgg gattgcccgg acacggtgat
     1741 ggcgcatttc ctggatggcc tcatcgtcta ccgacgcggg cgcgacgagc accgcccggc
     1801 gccgccggtg gcgaagcgcg tgggcaacaa cctggtgctg aagaagctgc gcgtggcgtt
     1861 cgagctgcgc gacgaggacc tgcacgccat cctcgaagcc gatgatttcc cgctgtcgaa
     1921 atcggaactt tcggcgctgt tccgcaagcc ggatcacccc aactaccgcc cgtgcggcga
     1981 ccagttgctg cggcatttcc tgcgcgggct gacacggcgg ctgcgcccgt gaagcgacgc
     2041 ctgcgcacgg gcatctgagc ggccacccac taccggcgag gacgaggcat gttgttcgac
     2101 gtggcgttct acacgctggg cgcgctgctg atcgtcggcg gcctggccgg caccatcctg
     2161 ccggcgctgc ccggcatccc catggtgttc ggcggcatct ggctgattgc cgcggtggac
     2221 aactaccagc acctgggcct ggggtggctg gtgttcatcg gcgcgctggg ggcgctcggc
     2281 gtgctggtgg atttcgtcgc ggcgacgctt ggcgccaagc gcgtcggggc cagccggcgg
     2341 gcgctgtggg gggcgtcgct cggcaccgtg gtcggcatgt tcttcggcat ccccggcatc
     2401 ctggtcgggc cgttcgccgg cgcgctgatc ggcgagttgt cctccggcac cagcgtgctg
     2461 cgcagcaccc acgtcggcgt cgcgacctgg ctcggcctgc tcgccggcgc gctggtgaag
     2521 ctggtgatct cgctggtgat ggtcggcctg ttcggcgtgg ccatgctgct cggttgagcc
     2581 ggcccatatg cgcgcacggc atataggcgt gcgctttatt cctttccggc cagccccctg
     2641 ccgacgcagc atgctgggtc agcggttcgc cagtcatggc gcggccgcgg cgacggcata
     2701 tgggcatgag caggacatga cgagttttac cccggtggaa ggcctggtcg gcggcgcgct
     2761 gatcgggttg gcagtggtga tgtggctggc gttgtacggc cgggtgaccg gcatcagcgg
     2821 catccttggc gatgcgctgt tcacgcacga ggcggacggg catggctggc gctcgctgta
     2881 tctcgttggc ttggtgatcg gcgccggcgt ttttctggcg attcgcggac acttgcccgg
     2941 cacgtatttc ggcgtggacc tgcaggacgg atggccgctg atgcttgcgg ccgggctgct
     3001 ggtgggtttt ggcacgcggc tcggccacgg ctgcacatcg gggcacggcg tgtgcgggct
     3061 cgcacggctc tccaagcgtt cgctggtggc gacgctgacc ttcatggcgt tcggctttct
     3121 cgctgcatcg tggctgcgcg gcgtgctggg gccggcatga gaaacctcgt cgcgctcctc
     3181 gccggcacgc tgttcggaat cgggctcggc gtctccggca tgctcgaccc cggcaaggtg
     3241 ctgggcttcc tcgacctttc ggcgcactgg gatccgacgc tggccttcgt gatgggcggc
     3301 gcggtgctgg tggcgctgcc cgcattccgc tgggcgcggc gcgcaccgcg tccgctcctg
     3361 accaacgcgt tctgcctgcc gcaccggcat gtgatcgacc gccgcctggt gatcggcgcc
     3421 gcgatcttcg gcgtgggctg ggggctgtcc ggcctgtgtc cgggcccggc ggtcgccgcg
     3481 ctggcaacgc tgcagtggcc ggtcttcggc ttcgtggccg cgatgatcgc cggccagtgg
     3541 ctggccgacc gcgtcccg
//
LOCUS       DASSVL010000182         9146 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_456138, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000182 DASSVL010000000
VERSION     DASSVL010000182.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 9146)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9146)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9146
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_456138"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..113)
                     /gene="rpmB"
                     /locus_tag="VFM52_03115"
     CDS             complement(<1..113)
                     /gene="rpmB"
                     /locus_tag="VFM52_03115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004631999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L28"
                     /protein_id="HET8764188.1"
                     /translation="MARICQVTGKGVQTGNNVSHANNRTRRRWLPNLHERR"
     gene            406..918
                     /gene="secB"
                     /locus_tag="VFM52_03120"
     CDS             406..918
                     /gene="secB"
                     /locus_tag="VFM52_03120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007810352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051082 - unfolded protein binding
                     [Evidence IEA];
                     GO_process: GO:0015031 - protein transport [Evidence IEA];
                     GO_process: GO:0051262 - protein tetramerization [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein-export chaperone SecB"
                     /protein_id="HET8764189.1"
                     /translation="MAEVATNGQANAQGTAPQLVLQKIYVKDVSFEVPGAPKIFQEFT
                     GDNGQPAPQVQLNLGHKAMDLGNDLYEVVLSVTLTCTLGEHTAYLAEVEQAGLFGIAG
                     FSEEDRAGVIGSYCPNLLFPYARQIISSMVLEGGFPPFLLQPINFDALYAEQMRRMTS
                     GGDAPATLNS"
     gene            928..1953
                     /locus_tag="VFM52_03125"
     CDS             928..1953
                     /locus_tag="VFM52_03125"
                     /EC_number="1.1.1.94"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008438520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009331 - glycerol-3-phosphate
                     dehydrogenase complex [Evidence IEA];
                     GO_function: GO:0047952 - glycerol-3-phosphate
                     dehydrogenase [NAD(P)+] activity [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0046167 - glycerol-3-phosphate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent glycerol-3-phosphate
                     dehydrogenase"
                     /protein_id="HET8764190.1"
                     /translation="MAEKTRLAVLGAGSWGTALAALTARNGVATTLWGRDPKALAAMA
                     ASRRNVRYLPDIELPATLAYEADLVAAVHGADVVLLVVPSHAFAAMLDEVAPLLAADA
                     VLAWATKGFEPGTGRFLHELVAHRLPGHPAAVITGPSFAREVAAGLPSAVTVHSEDAD
                     CAQRLAGLLHAPNLRAYTGGDMLGAELGGAMKNVLAVATGIADGMQLGLNARAGLITR
                     GMNEMLRLGMAIGARPETLIGLSGLGDLVLTCTGDLSRNRRLGLALGRGVAIDDAVRE
                     IGQVVESVLAADEVARLAAKHGLDLPISASVRAVLHGEVTPVEGLRALMARERKPEYP
                     HGLFGNA"
     gene            2035..5034
                     /locus_tag="VFM52_03130"
     CDS             2035..5034
                     /locus_tag="VFM52_03130"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008438521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HET8764191.1"
                     /translation="MSQPEGKQHAYDARLPVAWRRVLTPPSPPADTAAGVLGFFFEVL
                     PEDGAAWAHLDAAPILLDVGEHGRPLHPVPLDSHTLAQAPLPAHEQRLAATVLGLPQS
                     QRKGRSYARLTGRLGGSLLTELLDTAPCFLGGLAGLRLSRGKAYPLAWHWKLEADGSQ
                     RLLPQLPHNQRLLRVDALWYLDAEHATLGHLDAAAAETAWLDLPPLRHEDSTGFAAAI
                     AASPLAARIAPPQVFAHLQRADLAPKPVLTLQALTRHARLAGGAAPLAWARLAFDYGG
                     ERLPGRGGDPLVRRVRGGQLVEIVRRRAEELATMEQLERIGLTPGVDTEGLPWDIADT
                     LPDDAWLFPGTGHAGALEVNTPARWLALRPRLEAEGFTLDYAPSFPFEVLEGPVRWYG
                     RAQEDTDDHAFDLEIGIELDGKRCNLLPAVAQALAEHQLNLSPVPNEPDDAVWYAPVD
                     ERRRVPVRLKELRGLLAPLAEYLEKPRQQLHLPRVQAGRLDELAAVLPTGGTLEAPEN
                     LRGFTARLRDAAERASDAIPAGLTVELRPYQREGLRWLNALAAAGVGGVLADDMGLGK
                     TLQLITHLLALKEAGALETPALIVVPTSLIPNWQAEIARFAPALRVLTLHGPARAEAF
                     AQLGAQDIVLTSYALLPRDVVPLRRQAFALIALDEAQQVKNPRTQARRALLTLRTRRF
                     VCLTGTPLENHLGELWSQIDLAVPGLLGDEHAFRRFYRIPIERQHDEECQQRLNRRLA
                     PFILRRTKGQVAAELPPKTEITRHVMLEGRQRELYDSLRLALAEELREVIAQRGIAHS
                     GIVVLDALLKLRQVCCDPRLVKLEAARGVQNSAKFDLLMEMLPPLLDEGRKVLLFSQF
                     TSMLRLIASELDRRHIRYVTLTGETRDRAAPVEAFQHGEVPLFLLSLKAGGVGLNLTA
                     ADTVIHYDPWWNPAAEAQASDRAHRIGQDKPVFVFRLITSGTVEERIEEMKARKAELA
                     EAVLDGGGSRTRLSFDQGDLDMLLAPS"
     gene            5108..5518
                     /locus_tag="VFM52_03135"
     CDS             5108..5518
                     /locus_tag="VFM52_03135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019399064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043169 - cation binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hemerythrin domain-containing protein"
                     /protein_id="HET8764192.1"
                     /translation="MHVERYLQDHRHIAQQIAAMRSLSRDGIPAHAHDIAEQLATMAA
                     QIKLHLALEDQVLYPELARVADTALAALATRYQGEMAALTEAFAEFVAHWRVAAHIEA
                     DPEGFRHAANVVLKALHERLQREEAEFFPAVARL"
     gene            complement(5705..8116)
                     /locus_tag="VFM52_03140"
     CDS             complement(5705..8116)
                     /locus_tag="VFM52_03140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019465148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HET8764193.1"
                     /translation="MKTRYSALYVAMSLALAPCLAQAAQQDAASPAHAPAEKVKQLDT
                     VTVSAVKHETPLQKTPVAVSVIAADTIEQQRVMTVQDLTKLVPGLQGTSQGDHGVVTL
                     TLRGIGNDSAKTEYADPEVAVFVDGVYDPRAEAAAGLLLDIDNVQVMRGPQGTLWGRN
                     STAGAISFETIKPDIDSDFSGNAQIEAGNYHQMGTRAAVNLPISSTFAMRVAVAHEQH
                     DGYVDYQSPAGQLPSVAQQQATYLATGADPVKFIAIDPNQYEHNGAKYNAQDQTAARV
                     SALWRPSDAFQWNLSYEYFIDRGTLGMNLMQTPRPGQKFWSALIDRPPYLHRNSGTWR
                     SRMTWDISDAVEATYVAGYSKFFGASEFDQDAGVGVPTSFTTGATYQDDRTNYSNYKS
                     YSHEIDLKSRGAQVVDWVVGAYYSHEDNDMRFDIPQMHGTQYGSVSWQGSFIQPKELV
                     NSSAVFAQATWNLSDTWHLTGGARWSNDEKRNIGGRGWGWAYDPDLTQLPIAPSTIPG
                     PANNFAISTINDAKYQKGQLTWLGRVAADLGRNAMVYASVSTGYKSGGTQDAGSLYKP
                     EKLTNYEVGAKFTFLDGHLTWNNAAYYEDFKDFQLAAPVTFPNGNLGLAFSNVGGSTK
                     VAGFESELALLEPDDRANLTLSYIPKKTLGSLPYAGSNDYQGLPACPPASGIASCMDI
                     TGNDLAHAPTLALSALYEHDFHLPNGGRLTPRFSGQYQTAQWLSPFNLGDGDKQKAYF
                     RGDFALRYTEPQGRWWVSVYAQNFNNVRVRTNAMRFVMPDGSLQYVSQYLAPRTYGAT
                     VGMSF"
     gene            complement(8402..>9146)
                     /locus_tag="VFM52_03145"
     CDS             complement(8402..>9146)
                     /locus_tag="VFM52_03145"
                     /inference="COORDINATES: protein motif:HMM:NF037461.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="putative glycoside hydrolase"
                     /protein_id="HET8764194.1"
                     /translation="EGGGVADVLLRKPDGQVDFDFHGKLAFAWPSTALPAKGAPAFPL
                     GYGLTYADHVTVPALSEQSGVTGTTVRVDDYLEKGAAATGYTLNLTGADGRRSTVLAT
                     PAASADGNLRMTAVDYRAQEDARSLDWIGDSATLSVDAGKPLDLDRQANGDVMLVTTL
                     RLAAPTGGPVWIGMGCGHDCRGRVALKPLPPARWLRVGVPLKCLAAAGASMRHIVQPL
                     VLEAGRGTRLAVSGAALGTNADQVVDCAR"
BASE COUNT         1325 a         3070 c         3276 g         1475 t
ORIGIN      
        1 aagcgacgct cgtgcaggtt gggcaaccag cggcgacggg tacggttgtt ggcgtgcgag
       61 acattgttgc cggtctgcac accctttccg gtgacttggc aaatgcgggc catgatgagc
      121 tccgtagtat tcgttgaccg cccgttggcc agggcgacat cggcccagcg gcgccatgcg
      181 ccacgcagtg ctggagggag tgaagcagcc tggcatcgca agtccgcacc gcgtggcgga
      241 agccccggga accccgggtc gacgtcgacg agctgcgtat tgtcccctga aaacagccgg
      301 ctgcgcaatc ccgagtggcg cggcgccggc ttgcgcaggt gcggcacgcc ggcaggtatg
      361 aaacaatcag gctcttttga cgccattccc aaccgaggca tacccatggc agaagtcgcc
      421 accaacggcc aggccaacgc gcagggcacc gcgccgcaac tggtgctgca gaagatctac
      481 gtgaaggacg tttccttcga agtaccgggc gccccgaaga ttttccagga attcaccggc
      541 gataacggcc agcccgcgcc gcaggtgcag ttgaatctgg gccacaaggc gatggatctg
      601 ggcaacgacc tctacgaggt ggtgctcagt gtcacgctca cctgcacgct cggcgagcac
      661 acggcgtacc tggccgaagt ggagcaggcc gggttgttcg gcattgccgg tttcagcgag
      721 gaagaccgtg ccggcgtgat cggcagctac tgccccaacc tgttgttccc gtatgcgcgc
      781 cagatcatct cctcgatggt gctggaaggc ggcttcccgc cgttcctgct gcagccgatc
      841 aacttcgatg ccctgtacgc cgaacagatg cgccgcatga ccagcggtgg cgacgcgccg
      901 gcgacgctca acagctgagc cggtcggatg gccgagaaaa cccgtctcgc ggtgctcggt
      961 gccggctcct ggggcaccgc gctggcggcg ctgaccgcgc gcaatggcgt cgccaccacc
     1021 ttgtggggac gtgatccgaa agccttggca gcgatggcgg cgagccgccg caacgtgcgt
     1081 tacctgccgg acatcgagtt gccggccacg ctggcctacg aggccgatct cgtcgccgcg
     1141 gtgcacggcg ccgacgtcgt gctgctggtg gtgcccagcc atgcgtttgc ggcgatgctg
     1201 gacgaggtcg cgccgctgct ggccgccgac gccgtgctgg cgtgggcgac caagggcttc
     1261 gagcccggca ccggacgctt cctgcacgaa ctggtcgcgc atcgcctgcc gggacatccg
     1321 gcggcggtta tcaccgggcc gtcgttcgcc cgcgaagtgg cggccgggct gcccagcgcg
     1381 gtcaccgtgc actccgagga cgccgactgt gcgcagcgtc tcgccggcct gttgcatgcg
     1441 cccaacctgc gcgcctacac cggcggcgac atgctcggtg ccgagctggg cggcgcgatg
     1501 aagaacgtgc tggcggtggc caccggcatc gccgacggca tgcagctcgg cctcaacgcg
     1561 cgcgccggcc tgatcacccg tggcatgaac gagatgctgc gtctcggcat ggccatcggc
     1621 gcgcggccgg aaaccctgat cggcctgtct ggcctgggcg acctcgtgct gacctgcacc
     1681 ggtgacctgt cccgcaaccg ccggctcggg ctggcgcttg gccgcggcgt ggcgatcgac
     1741 gacgccgtgc gcgagatcgg ccaggtggtg gaaagcgtgc tggccgccga cgaggtggcg
     1801 cggctggccg ccaagcacgg gctcgacctg ccgatcagcg ccagcgtgcg cgccgtgctc
     1861 cacggcgagg tgacgccggt cgaggggctc agggcgctga tggcgcgcga gcgcaagccc
     1921 gagtatccgc acggcctgtt cggcaacgcc tgaccaccgc ggccgtgacc acgcggaccc
     1981 gccgccaagc ctgctaagct cgggcttttg gtcgcggcca cgaggcgcat acggatgtcg
     2041 cagccggagg ggaaacagca tgcctacgat gcgcgcctgc cggtggcgtg gcggcgcgtg
     2101 ctgaccccgc cgagccctcc ggcggacact gcggcgggcg tgctcggctt cttcttcgag
     2161 gtgctgcccg aggacggtgc cgcgtgggcg cacctggatg ccgcgccgat cctgctcgac
     2221 gtcggcgagc atggccgccc cctgcacccg gtgccgctcg acagccatac gcttgcccag
     2281 gcgccactgc cggcccacga gcaacgcctg gccgccaccg tgctcggcct gccgcaaagc
     2341 cagcgcaagg gccgcagcta tgcgcgactc accggccggc tcggtggcag cctgctgacc
     2401 gagttgctgg ataccgcccc gtgtttcctc ggcggcctcg ccggcctgcg gctgtcgcgc
     2461 ggcaaggcgt atccgctggc gtggcactgg aaactggaag ccgacggcag ccagcgcctg
     2521 ttgccccagc tgccgcacaa ccagcgcctg ctgcgtgtcg atgccttgtg gtacctcgat
     2581 gccgagcacg ccacgctcgg tcatctcgac gccgcggcgg cggaaaccgc gtggctcgac
     2641 ctgccgccgc tgcgccatga ggacagcacc ggctttgccg cggccatcgc cgccagcccg
     2701 ctcgccgcgc gcatcgcgcc gccgcaggtg ttcgcgcacc tgcagcgtgc cgacctggcg
     2761 ccgaaaccgg tgctcacgct gcaggcgctg acccgtcacg cgcgactggc cggcggcgcg
     2821 gcgccgctgg cctgggcgcg gctggcgttc gactatggcg gcgagcggct gccgggccgt
     2881 ggcggcgatc cgctggtgcg ccgcgtgcgc ggcggccagc tggtggagat cgtccgccgc
     2941 cgcgccgagg agctcgcgac gatggagcag ctcgaacgca tcggcctgac cccgggggtg
     3001 gataccgaag gcctgccgtg ggacatcgcc gacaccttgc ccgacgatgc ctggttgttt
     3061 cccggcaccg gccacgccgg cgcgctggag gtcaacacgc cggcacgctg gctggcgctg
     3121 cgcccgcggc tcgaagccga gggtttcacg ctcgactacg cgccaagctt cccgttcgag
     3181 gtgctcgagg gtccggtgcg ctggtacggc agggcgcagg aggataccga cgaccacgca
     3241 ttcgacctgg aaatcggcat tgaactcgac ggcaagcgct gcaacctgct gccggcggtg
     3301 gcgcaggcgc tggccgagca ccagttgaac ctgagcccgg tgccgaacga gccggatgat
     3361 gcggtttggt atgccccggt ggatgagcgc cgccgcgtgc cggtgcgcct caaggagctg
     3421 cgcggcctgc tggcgccgct ggccgaatat ctggagaagc cgcgccagca gctgcacttg
     3481 ccgcgcgtgc aggccgggcg gctcgatgaa ctggctgccg tactgccgac gggcggcacg
     3541 ctggaggcgc cggaaaacct gcgcggcttc accgcgcgcc tgcgcgacgc cgccgagcgc
     3601 gcgagcgacg cgattccggc cgggctcacg gtcgagctgc gcccgtacca gcgcgagggc
     3661 ctgcgctggc tcaacgcgct ggccgcggcc ggcgtcggcg gcgtgctggc ggacgacatg
     3721 gggctgggca agacgctgca gctcatcacc catctcttgg cgctgaagga agccggtgcg
     3781 ctggaaaccc cggcgctgat cgtggtgccg accagcctga tcccgaactg gcaggccgag
     3841 atcgcgcgct tcgcgccggc gctgcgcgtg ctcacgctgc acggtccggc gcgggcggaa
     3901 gccttcgccc agctcggcgc gcaggacatc gtgctgacca gctacgcgct gttgccgcgc
     3961 gacgtcgtgc cgctgcgccg gcaggcgttc gcgctgatcg cgctggacga ggcgcagcag
     4021 gtcaagaatc cgcgcaccca ggcacggcgc gcgctgctca cgctgcgcac gcggcgcttc
     4081 gtatgcctga ccggcacgcc gctggaaaac cacctcggcg agctgtggtc gcagatcgac
     4141 ctggcggtgc ccggcctgct cggtgacgaa cacgcgttcc gccgcttcta ccgcatcccg
     4201 atcgagcgcc agcacgacga ggaatgccag cagcgcctga accgccggct ggcgccgttc
     4261 atcctgcgcc gcaccaaggg ccaggtcgcc gccgagctgc cgccgaagac cgagatcacc
     4321 cgccacgtca tgctggaagg ccgccagcgc gagctgtacg acagcctgcg cctggcgctg
     4381 gcggaggaac tgcgcgaggt gatcgcccag cgcggcatcg cgcactccgg catcgtcgtg
     4441 ctcgatgcgc tgctcaagct gcgccaggtg tgctgcgacc cgcgcctggt caagctcgaa
     4501 gccgcgcgcg gggtgcagaa ctcggccaag ttcgacctgt tgatggaaat gctgccgccg
     4561 ctgctggacg aaggccgcaa ggtgctgctg ttctcgcagt tcaccagcat gctgcggctg
     4621 atcgccagcg agctggatcg acggcacatc cgctacgtca ccctcaccgg cgaaacccgg
     4681 gaccgcgcgg cgccggtcga ggcattccag cacggcgagg tgccgctgtt cctgctctcg
     4741 ctcaaggctg gcggcgtggg cctgaacctc accgctgccg acaccgtcat ccactacgac
     4801 ccgtggtgga accccgcggc cgaggcgcag gcttccgacc gcgcgcatcg catcggccag
     4861 gacaagccgg tattcgtgtt ccgcctgatt accagcggta ccgtcgagga gcgcatcgag
     4921 gagatgaagg cgcgcaaggc ggaactggcc gaggccgtgc tcgacggcgg tggcagccgc
     4981 acgcggctga gcttcgacca gggcgacctg gacatgctgc tggcccccag ctgagcaggc
     5041 cctaaagtcc gccgcagaca agtcgatcat ccactggtgc gttcacgcct atgcgggggg
     5101 agccgccatg catgtcgagc gttatctgca ggaccaccgg cacatcgcgc agcagatcgc
     5161 ggcgatgcga tcactcagcc gggacggcat tccggcccac gcccacgata tcgccgagca
     5221 gctcgccacc atggcggcgc agatcaagct gcacctggca ctggaagacc aggtgctgta
     5281 tccggaactg gcgcgggtgg cggatacggc gctggcggcg ctggccacgc gctaccaggg
     5341 cgagatggcc gcgttgaccg aagcgttcgc ggagttcgtc gcgcactggc gcgtggctgc
     5401 gcacatcgag gccgacccgg agggcttccg ccatgccgcc aacgtggtgc tgaaggcctt
     5461 gcacgagcgc ttgcagcgcg aggaggccga gttctttccc gccgtcgcca ggctgtaggc
     5521 acgccgccgc ccaggactcc cgcgcggcgt tcgctgcagc cgcggtggga aaagaggcgc
     5581 cggacccttg cgggcccggc gcagctgcca tgccggggga ggggtgtgcc ggaaacggcg
     5641 gcggcacctt gttggcggca tggcaaaacg gtggtggcac cggccggcga ccggtgccgc
     5701 cgattcagaa cgacatgcct acggtggcgc cgtaggtgcg tggcgccagg tactgggaaa
     5761 catactgcag gctgccgtcg ggcatcacga agcgcatcgc attggtgcgt acccggacgt
     5821 tgttgaagtt ctgcgcgtac acgctgaccc accagcggcc ctgcggttcg gtgtagcgca
     5881 gcgcgaagtc accgcggaag tacgccttct gcttgtcgcc gtcgccgagg ttgaacgggc
     5941 tgagccactg cgcggtctgg tactggccgc tgaagcgcgg ggtcaggcga ccgccgttgg
     6001 gcaggtggaa atcgtgctcg tagagggcgg acagcgcgag cgtcggcgcg tgggccaggt
     6061 cgttgccggt gatgtccatg caactggcga tacccgaggc cggcgggcag gccggcagcc
     6121 cctggtagtc gttgctgccc gcgtagggca ggctgccaag cgttttcttg gggatgtacg
     6181 acagcgtcag gttggcgcga tcgtcgggtt cgagcagcgc gagttccgac tcgaagccgg
     6241 ccaccttggt gctgccgccc acgttggaga acgccaggcc gaggttgccg ttcgggaagg
     6301 tgaccggtgc ggcgagctgg aagtccttga agtcctcgta gtacgccgcg ttgttccagg
     6361 tcaggtggcc gtcgaggaag gtgaacttgg cgccgacctc gtagttggtc agcttctcgg
     6421 gcttgtacag cgagccggcg tcctgggtgc cgccggactt gtagccggtg gagacgctgg
     6481 cgtagaccat ggcgttgcgg ccgaggtcgg cggcgacgcg gccgagccag gtcagctggc
     6541 ccttctggta cttggcgtcg ttgatggtgg agatggcgaa gttgttcgcc gggcccggga
     6601 tcgtgctggg cgcgatcggc agctgggtca ggtcggggtc gtaggcccag ccccagccgc
     6661 ggccgccgat gttgcgcttc tcgtcgttgg accagcgcgc gccgccggtc aggtgccagg
     6721 tgtcggaaag gttccaggtc gcctgggcga acacggcgct ggagttgacc agctccttgg
     6781 gctggatgaa cgacccctgc cagctcaccg aaccgtactg ggtgccgtgc atctgcggga
     6841 tgtcgaaccg catgtcgttg tcttcgtggc tgtagtaggc gccgacgacc cagtcgacca
     6901 cctgcgcgcc gcgcgacttc aggtcgatct cgtggctgta gctcttgtag ttggagtagt
     6961 tggtgcggtc gtcctggtag gtcgccccgg tagtgaagct ggtgggcacg ccgacgccgg
     7021 catcctggtc gaactcactg gcgccgaaga acttgctgta gccggcgacg taggttgcct
     7081 ccaccgcgtc gctgatatcc caggtcatgc ggctgcgcca ggtgccggag ttgcggtgca
     7141 ggtagggcgg cctgtcgatc agcgccgacc agaacttctg gccggggcgc ggcgtctgca
     7201 tcaggttcat gccgagcgtg ccgcggtcga tgaagtactc gtaggagagg ttccactgga
     7261 acgcgtcgct cggccgccac agcgcgctca cccgggccgc ggtctggtcc tgcgcgttgt
     7321 acttggcgcc gttgtgctcg tactggttcg ggtcgatcgc gatgaacttc accgggtcgg
     7381 cgccggtggc caggtaggtg gcctgctgct gcgccacgct gggcaactgg ccggcggggc
     7441 tctggtagtc gacgtatccg tcgtgctgct cgtgcgccac ggccacgcgc atcgcgaacg
     7501 tgctgctgat cggcaggttc actgccgcgc gggtgcccat ctggtggtag ttgccggcct
     7561 cgatctgcgc attgccggag aaatcgctgt cgatgtcggg cttgatggtt tcgaagctga
     7621 tcgcgccggc agtggagttg cgcccccaca gggtgccctg cgggccgcgc atcacctgca
     7681 cgttgtcgat gtccagcagc aggccggccg ccgcttcggc gcgcgggtcg tagacgccgt
     7741 cgacgaacac cgccacttcg ggatcggcat actcggtctt ggcgctgtcg ttgccgatgc
     7801 cgcgcaaggt cagcgtgacc acgccgtggt cgccctgcga agtgccttgc aggccgggca
     7861 ccagtttggt caggtcctgc accgtcatca cccgctgctg ctcgatggtg tcggcggcga
     7921 tgacgctgac cgccaccggt gtcttctgca gcggggtttc gtgcttgacg gcggaaaccg
     7981 tgacggtgtc gagctgcttg accttttcgg ccggggcgtg ggctggcgat gccgcatcct
     8041 gctgagccgc ttgcgccagg cagggcgcga gcgcgagcga catggcgacg tacagcgccg
     8101 agtaacgcgt tttcatgtgg tgtcccctct tctgtcttgt tgtggctgac gggtggtacc
     8161 ggtggtaccg atggcgtaac gattactccc caattgacag cgtaagattg tctatgtacg
     8221 acagcgctgt cgtaaaactc taactccatt ccgggcgcga gtgcatccgg tcatgcgtgg
     8281 cggcaaatga cttctgggca tttgcggagg cgtgctgggc atatggcgtg gttttcggct
     8341 tgccggcgtg gcttgcgtcg cggctggcgg ctgccgcggc gtgaccatcg gcgtcgcctg
     8401 cctatctcgc gcaatccacc acctggtcgg cattggtgcc cagcgcggcg ccggataccg
     8461 ccaaccgcgt tccgcggccg gcttcgagca ccagcggctg cacgatgtgg cgcatgctgg
     8521 cgccggccgc cgccagacac ttcagcggca cgcccacgcg cagccagcgc gccggcggga
     8581 gcggtttcag cgccacgcga ccgcggcagt cgtggccgca gcccatgccg atccacaccg
     8641 gcccgccagt cggtgcggcg aggcgcaggg tggtcaccaa catcacgtcg ccattggcct
     8701 ggcggtcgag gtcgagcggc ttgccggcgt ccacgctcag cgtggcggaa tcgccgatcc
     8761 agtcgaggct gcgcgcatct tcctgggcgc ggtagtccac ggcagtcatg cgcaggttgc
     8821 cgtcggcgct ggccgccggg gtggcgagca ccgtgctgcg gcgaccatcg gccccggtga
     8881 gattgagcgt gtagccggtg gcggcggcgc ccttttccag gtagtcgtcc acgcgtacgg
     8941 tggtgcccgt gacgccggat tgttcggaca acgccggtac cgtcacgtgg tcggcgtagg
     9001 tgagcccgta gcccagtggg aacgcgggcg cgcccttggc gggcagggca gtggacggcc
     9061 aggcgaaggc cagcttgccg tggaagtcga aatccacctg gccgtccggc ttgcgcagca
     9121 gcacgtcggc cacgccgccg ccctcg
//
LOCUS       DASSVL010000183         4593 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_978994, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000183 DASSVL010000000
VERSION     DASSVL010000183.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 4593)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4593)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4593
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_978994"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..578
                     /locus_tag="VFM52_03150"
     CDS             <1..578
                     /locus_tag="VFM52_03150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007080874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HET8764195.1"
                     /translation="RAPFDGVVTKRYVQVGEAVAGPPFPQQLIAIAALAQLRVEATLP
                     QAVAELLRQGGRAEVLADGGRQRVAVTRVTVFPVADPATHTVNVRFELPAGVAGLYPG
                     MTVKLALGSGASAAPAVLAVPRSALVQRGELAGVYVVTAHAASLRQLRIGETQGERVT
                     VLAGLAAGERVATDPAAAARWLVAQRAEHAR"
     gene            575..3805
                     /locus_tag="VFM52_03155"
     CDS             575..3805
                     /locus_tag="VFM52_03155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007510325.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HET8764196.1"
                     /translation="MSAPRLSIAGRIARAFQASPLTPVLALAALLLGLTAMLITPREE
                     EPQIDVTMADVTVPFPGASARDVENLVTFPLERRLDEMQGVKHVFSVSRPGVAVLTVQ
                     FDVGVPRQAALVRLYNQVLQNRDFVPPNLGVGQPVVRAMGIDDVPAMALTLWSDRADA
                     TPEQLAEVARTLEVQLKRIPGTRDVSLIGAPQRAVLVELDPGKLAAYGLDARQLAASL
                     KAANVVAQAGDQVSGNRDTPVTAGSFLASAGDVASLVIGLKDGAPVHLSDVATIRRGA
                     DVATSYAWYGAPPGKSAPATGSAPAVTIAIAKKAGSNASDITAAVRARLAALRGIDIP
                     AGMHVAVTRDYGHTASAKADELLLHLLLATAAVVLLVVFALGWREGIVVGAAVVITLM
                     LMLFASWAMGFTINRVSLFALIFSIGILVDDAIVVVENVHRHMALGGRTLREAIPEAV
                     SEVGGPTILATFTVIAALLPMAFVSGLMGPYMRPIPINASAGMLLSLMVALAVTPWLA
                     LHVMRHDAGEATDGAAHEAADGRVARLFQRLMRPFVSGPRAARRRHVLFGAMGALVIA
                     SAGLVVVKTVVLKMLPFDNKSEFQLVVDMPAGSTLESTNALLQALAAQVATIPEVKDW
                     QGYAGTAAPTTFNGLVRQYYLRQGPLVGDLQVNLVDKADRKRQSHAIALAARPALAAI
                     AQRYGAALKVVEVPPGPPVLAPIVAEVYGPDARAIRTAALQLETMFRAQPGVVDVDTS
                     EEAAAPRAVVTIDRERVARLGLSQADVVHALRTALSGDDATYLMDGHARAAIPVRLRL
                     PVADQASMERLLSLRVRTQGGALVPLSAVATVRQAGWDDAIYHKDLQPYATVTGDDAG
                     RTDSPLYGMFGLVGKLAHARLDGLPVTQDFIRAPEASTGIAVKWDGEWQVTYETFRDM
                     GIAYLGGLVLIYLLVVGEFKSYLVPLIIMAPIPLTVIGVLPGHALLGAQFTATSMIGM
                     IALAGIIVRNSILLIDFINHALAAGRPLADAVIDAAAVRAKPIALTALAAMLGGFFIL
                     DDPIFQGLAVSLIFGVLVSTVLTLVVIPLLYYAWLARGRAGLPGHA"
     gene            3854..>4593
                     /locus_tag="VFM52_03160"
     CDS             3854..>4593
                     /locus_tag="VFM52_03160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015446769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S1/P1 nuclease"
                     /protein_id="HET8764197.1"
                     /translation="MPLRRRLLAALLVATVVVPAAQAWGPLGHSVVAALAQRQLDPAA
                     AAEVKHLLAADHTDRLADVAAWPDQLRDDPALDGLWKRTRKLHYVNFRGGPACDYVPP
                     RDCRDGECVVAGLAHYVAILGDTSRSDADRLQALIFVTHFVGDIHQPLHDGYRDDQGG
                     NTYQVRFEGAGSNLHKVWDSGLLETRGLAWPAYAALLAAEGPVTLPPPIAPLDNPYAQ
                     WAEASCRLTAAPGFYPDGHRIEPAYVEA"
BASE COUNT          595 a         1650 c         1649 g          699 t
ORIGIN      
        1 tgcgcgcgcc gttcgacggc gtggtgacga agcgttacgt gcaggtgggc gaagccgttg
       61 ccggcccgcc gtttccgcag cagctcatcg cgattgccgc gctcgcgcag ctgcgcgtgg
      121 aggcgaccct gccgcaggcg gtggccgagc tgctgcgcca gggtggtcgc gccgaagtgc
      181 tggccgatgg tggccggcag cgcgtggcgg tgacgcgggt caccgtgttt ccggtcgccg
      241 acccggcgac gcacacggtg aatgtccgct tcgagctgcc ggccggcgtg gccggcctgt
      301 accccggcat gacggtgaaa ctcgcgctgg gcagcggcgc gtcggccgcg cccgccgtgc
      361 ttgcggtgcc gcgcagcgcc ctcgtgcagc gcggcgagct ggccggcgtg tacgtggtca
      421 ccgcgcatgc ggcgagcctg cgccagttgc gcattggcga gacgcagggc gagcgggtga
      481 cggtgctcgc cgggctcgcg gccggcgagc gcgtggccac cgatcccgct gccgccgcgc
      541 gctggctcgt ggcgcaacgc gccgagcacg cacgatgagc gcgccacgct tgtccattgc
      601 cgggcgtatc gcgcgcgcct tccaggcctc gccgctgacg ccggtgctcg cgctggccgc
      661 gctcttgctc ggcctgaccg cgatgctgat cacgccgcgc gaggaagagc cgcagatcga
      721 cgtgaccatg gcggatgtca ccgtgccgtt tcccggcgcc tcggcacgcg acgtcgagaa
      781 cctcgtcacc ttcccgctcg aacgccggct ggatgaaatg cagggcgtga agcacgtgtt
      841 ctcggtgagc cgccccggcg ttgccgtgct caccgtgcag ttcgacgtcg gcgtgccgcg
      901 ccaggcggcg ctggtgcggt tgtacaacca ggtgctgcag aaccgcgatt tcgtgccgcc
      961 gaacctcggc gtcggccagc cggtggtgcg cgcgatgggc atcgacgacg tgccggcgat
     1021 ggcgctcacg ctgtggagcg accgcgccga cgccacgccg gagcagctcg ccgaggtcgc
     1081 gcgcacgctg gaagtgcagc tcaagcgcat ccccggcacg cgcgacgtga gcctgatcgg
     1141 cgcgccgcag cgcgcggtgc tggtcgagct cgatcccggc aagctcgccg cctatggcct
     1201 cgacgcgcgg cagcttgccg cgtcgctgaa agccgcaaac gtcgtcgccc aggctggcga
     1261 ccaggtgagc ggcaaccgcg acacgccggt caccgccggc agctttcttg ccagcgccgg
     1321 cgacgtcgcg agcctcgtga tcggcctcaa ggacggcgcg ccggtgcacc tgtccgacgt
     1381 cgcgacgatc cgccgcggcg ccgacgtggc gacgagctac gcgtggtacg gcgcgccgcc
     1441 cggcaagtcg gcgccggcca ccggcagcgc gccggcggtg accatcgcca tcgcgaagaa
     1501 ggctggcagc aatgcttccg acatcaccgc cgccgtgcgc gcgcggctcg cggccttgcg
     1561 cggcatcgac atccccgccg gcatgcacgt ggcggtcacc cgcgattacg gccataccgc
     1621 cagcgcaaag gcggacgagc tcctgctgca tctgctgctg gccaccgccg ccgtggtgct
     1681 gctggtggtg ttcgcgctcg gctggcgcga gggcatcgtg gtcggcgcgg cggtggtcat
     1741 cacgctgatg ctgatgctgt tcgcgtcgtg ggcgatgggc ttcaccatca accgcgtgtc
     1801 gttgtttgcg ctgatcttct ccatcggcat ccttgtcgac gacgccatcg tggtggtgga
     1861 aaacgtgcac cgccacatgg cgcttggcgg gcgcacgctg cgcgaggcga tccccgaggc
     1921 ggtgagcgaa gtcggcgggc cgaccatcct cgcgaccttc accgtgatcg ccgcgctgct
     1981 gccgatggcg ttcgtctccg gcctgatggg gccgtacatg cggccgatcc cgatcaatgc
     2041 ctcggccggc atgctgcttt cgctgatggt cgcgctggcg gtgacgccat ggctcgcgct
     2101 gcacgtgatg cggcacgacg cgggcgaggc cacggacggc gctgcgcacg aagctgccga
     2161 cggccgcgtg gcgcggctgt tccagcgcct gatgcggccc ttcgtcagcg ggccgcgcgc
     2221 ggcgcgccgg cggcatgtgc tgttcggcgc gatgggcgcg ctggtgatcg cctcggcggg
     2281 cctcgtcgtg gtcaagaccg tggtgctcaa gatgctgccg ttcgacaaca agagcgagtt
     2341 ccagctggtg gtggacatgc ccgccggcag cacgcttgaa tccaccaacg cgctgctgca
     2401 ggcgctggcc gcgcaggtgg cgacgatccc cgaggtgaag gactggcaag gctacgccgg
     2461 caccgccgcg ccgaccacgt tcaacggcct ggtgcgccag tactacctgc ggcaaggccc
     2521 gctggtcggc gacctgcagg tgaacctggt ggacaaggcc gaccgcaagc gccagagcca
     2581 cgcgatcgcg ctggccgcgc ggccggcgct ggcggcgatt gcccagcgct acggcgccgc
     2641 gctcaaggtg gtggaagtgc cgcccggccc gccggtgctg gcgccgatcg tggccgaggt
     2701 ctacggcccg gacgcacgcg cgatccgcac cgccgcgctg caactggaaa ccatgttccg
     2761 cgcccagccg ggcgtggtcg acgtcgacac cagcgaggag gccgccgcgc cgcgcgcggt
     2821 ggtgaccatt gatcgcgagc gcgtcgcgcg gctcggcctg agccaggccg acgtggtgca
     2881 cgcgctgcgc acggcgctgt ccggcgatga tgcgacctac ctgatggatg gccatgcgcg
     2941 cgcggcgatc ccggtgcggc tgcgcctgcc ggtcgccgac caggccagca tggagcgctt
     3001 gctctcgctg cgcgtgcgca cgcagggcgg cgcgctggtg ccgctgtccg ctgtcgccac
     3061 ggtgcgccag gccggctggg acgacgcgat ctaccacaag gacctgcaac cctacgccac
     3121 cgtcaccggc gacgatgccg ggcgcaccga cagcccgctg tacggcatgt tcgggctggt
     3181 cggcaagctc gcgcacgcca ggctcgacgg gctgccggtg acccaggatt tcatccgcgc
     3241 gccggaggct tccaccggca ttgcggtgaa gtgggacggc gagtggcagg tgacctacga
     3301 aaccttccgc gacatgggca tcgcctatct cggcggcctg gtgctgatct acctgctcgt
     3361 ggtcggcgag ttcaagagtt atctcgtgcc gctcatcatc atggcgccga ttccgctcac
     3421 cgtgatcggc gtgctgccgg gccacgcgct gctcggcgcg cagttcaccg ccacctcgat
     3481 gatcggcatg atcgcgctgg ccggcatcat cgtgcgcaac tccatcctgc tgatcgactt
     3541 catcaaccac gcgctggccg ccggccggcc gctggccgat gcggtgatcg acgcggcggc
     3601 ggtgcgcgcc aagccgatcg cgctgaccgc gctggcggcg atgctgggcg ggttcttcat
     3661 cctcgacgat ccgatcttcc aggggctcgc ggtgtcgctg atcttcggcg tgctggtgtc
     3721 gaccgtgctc accctggtgg tgatcccgct cttgtactac gcctggctgg cgcgcgggcg
     3781 ggcaggactt ccgggccatg cgtgaggcgc ggatgatggc aggataggcg gcttcgtcgt
     3841 tcgggataaa cccatgccgc tccgtcgccg cctgcttgcc gccctcctgg tcgccaccgt
     3901 tgtcgtgccc gccgcgcagg cctgggggcc gctgggccac agcgtggtgg cggcgctcgc
     3961 gcagcggcag ctcgatccgg cggccgccgc cgaggtgaag cacctgctgg ccgccgacca
     4021 caccgaccgg ctggcggacg tcgccgcctg gcccgaccag ctccgcgacg atcccgcgct
     4081 cgacggcttg tggaagcgca cgcgcaagct gcactatgtc aacttccgcg gcggtccggc
     4141 ctgcgactac gtgccgccgc gcgactgccg cgacggcgag tgcgtcgtcg ccggcctcgc
     4201 gcactacgtc gccatcctcg gcgatacctc gcgcagcgat gccgaccgcc tgcaggcgct
     4261 gatcttcgtc acgcatttcg tcggcgacat ccaccagccg ctgcacgacg gctaccgcga
     4321 cgaccagggc ggcaacacct accaggtgcg tttcgagggc gcgggcagca acctgcacaa
     4381 ggtgtgggat tcgggcctgc tggaaacccg cggcctggcc tggccggcct acgcggccct
     4441 gcttgccgcc gaaggcccgg tgacgctgcc gccgcccatc gcgccgctgg acaaccccta
     4501 cgcgcaatgg gcggaggcct cctgccggct caccgccgca ccgggcttct accccgatgg
     4561 ccaccggatc gagccggctt acgtcgaggc cga
//
LOCUS       DASSVL010000184         6080 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_752748, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000184 DASSVL010000000
VERSION     DASSVL010000184.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 6080)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6080)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6080
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_752748"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(545..1726)
                     /locus_tag="VFM52_03165"
     CDS             complement(545..1726)
                     /locus_tag="VFM52_03165"
                     /EC_number="2.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005911622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003985 - acetyl-CoA C-acetyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA C-acyltransferase"
                     /protein_id="HET8764198.1"
                     /translation="MSDSSIVIAGAKRTAIGSFLGQFTGVPTPTLGAAAIRAALAQSG
                     VAPADVSEVIMGCVLPANLGQAPARQASFGAGLPPSAGCTTINKVCGSGMKAIMLGND
                     LIRAGSASIVVAGGMESMTNAPHMVQARTGIRYGDGKLVDHMAWDGLTNPYDGKAMGV
                     FGESCADKYHFTREAQDAFAIESVKRSKAAQASGAFADEIVPVTVSGRKGDVVIDTDE
                     QPGRSNIEKIPTLKPAFRKENGTITAASSSSISDGAAAVILLAADDAKARGIQPLARI
                     VAHATHSQEPQWFTTAPVGAIQKVLAKAGWKVGDVDLFEINEAFAVVTMAAMTELDIP
                     HAKVNVNGGACALGHPIGCSGARLVVTLLNAMKLRGARRGVASLCIGGGEATAIAVEL
                     A"
     gene            1956..4853
                     /locus_tag="VFM52_03170"
     CDS             1956..4853
                     /locus_tag="VFM52_03170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007511921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S8 family serine peptidase"
                     /protein_id="HET8764199.1"
                     /translation="METRWNINLRHLPCGRLACAIGLALSLAACGGGGGGGLKPTPLS
                     PTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPAPPPPPPLDAQLGLTNTYAAHSQGFTG
                     SGVTIGIVDSGIMRNNPTVAGRVVQPEQIYVSSPPNNTGIDDVVGHGTWVAGIAAGAP
                     FAKFPGGIAPGASLVSARIISDTPPADDGSGQGNPVTASDALFFAQTLNPALISAGVQ
                     VMNNSWGGIYWDNSNTSISQAFGQAYVPFVVQHGGLVVFAAGNSSAANPSDIASLPTL
                     APNLGLDKGWLVATAADSNNPTQLASYSNQCGRAMNYCLTAPGDVIVLDKDTLASTTA
                     PTYWQVGGTSFAAPMVSGAAALVWQAYPYFNNDLVRQTLLGTATDLGTPGPDPVFGYG
                     MLNVGRAVNGPMQFNWGDVTVAFTGSSSWNNPISGAGGLVKQGSGTLNLTQPSTYTGL
                     TQVQGGTLMAKALAGAATISSGATLGGMTAIGGNVTNGGTLALGTSSVNVGGNYTEQA
                     GSTLSLSVGSTLNVAGAATLAGNLLVTGVNSGYTPNSHTNVVVTQGGLTGTFSGVTAA
                     TNVLLVATPGYDTKSAWLNVSSVSATAVQGASYTAASYGAAQRVDAAFGQLDAQLGSG
                     AGAAAVGSGFLGAAGQLQHTATVAALQSSLESLSGQLHAASAAMTFEAIDAGTRALSQ
                     RFEQLLAAPQPGAWAQSLGYHGDMSRSGYGGVGYDLSGWLVGRDFRAGNGVAGFALSR
                     SQGLGRLEESADQGYSHAVEGMVYGGVTRDAWYAMGRFGIGDYQQTMRRQLQLGAVAD
                     GVVSANRGRYGVAYGESGYRVMLDGTDVTPYACMEYAQIRRDGFDELGGGGFGLKSAA
                     LTTSRWQACLGVRASRSWQLPRGGSLTLQGRADWQQSFGLHGEVFDASFTGLNQWAPL
                     GGVGLSRYGGHVGAALNWDITSRSNLALGYDQYSGQREQARMATLAYRWSF"
     gene            complement(4896..5696)
                     /locus_tag="VFM52_03175"
     CDS             complement(4896..5696)
                     /locus_tag="VFM52_03175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007806087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR family DNA-binding transcription
                     regulator"
                     /protein_id="HET8764200.1"
                     /translation="MSKSPERPRPHLLPDERRRLIAEYVDQHGRATVQELARQFGTSA
                     VTIRGDLDVLANAAAIVRSHGGALPRLPVSNDAPVTIKETRHQAQKQRIGAAAARLIR
                     DGETIILDSGSTTMEIARQIRQRKFDSLTVITNALNIALELSGQPGVRVMMLGGMLRA
                     TSYSLVGPDAQQALSKLSADRLFLGVDGLDPEIGVTTPDPLESALNALMIRVARRTIA
                     VMDASKLGQRSLSVIAPVHQLHKVITDKQAAPELVEALRGAGIEVELA"
     gene            complement(5693..>6080)
                     /locus_tag="VFM52_03180"
     CDS             complement(5693..>6080)
                     /locus_tag="VFM52_03180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007806085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HET8764201.1"
                     /translation="NAENLAAVAACLDRFPNTLVDISARVGELGRQPRLAQKFFDRYQ
                     DRILFGTDAVPSPWGDDVPQQLFGDELYEIYYRFLETEDEYFDYAPAETPPQGRWAIY
                     GLRLDEQVLRKVYHANAARLFHLPEP"
BASE COUNT          947 a         2026 c         2115 g          992 t
ORIGIN      
        1 aacccgggat gatagccgtt gggttcacgc aacgaatgtt gcacctgcga actgcagaca
       61 agaaaacggc cgcgcaaggc ggccgttttc cagcaaccac cgaagtggat tacttggcgt
      121 cgccagccgg agcagcagcg gtcgaagccg gcgcagcagc ggcggtcgaa gccggagcag
      181 ccgcgggagc cgcggcggtc gaagccggag cagcctcggg ggcagcagcc ggagcagcag
      241 cggtcgaagc cgcagcctgt tgagcctggt cagcggactg ctgagtctgg tcagcggact
      301 gctgggcgtt ctgcgcggaa tcctgcgcgc cgttgctgca agccgccagc agcgcgacga
      361 gcgcggaggc gagtagggta cgcgtaaact tcatggtaaa tctcctatgc cgtggaatgc
      421 cgtggtatgg ccggctatta atagcgcttt cgcgctgttc gcgccatatc tttcggcggg
      481 aaacttcaga attcgttgtt gggcggttca acctgctttc agtgtgcggc agcctggcct
      541 gccatcacgc cagctcgacg gcgatggcgg tggcttcccc gccgccgatg cacaggctgg
      601 ccacgccgcg tcttgcgccg cgcagtttca tcgcgttgag cagcgtcacc acgaggcgcg
      661 cgccgctgca gccgatcgga tggccaagcg cgcacgcgcc gccgttgacg ttgaccttgg
      721 cgtgcggaat gtccagctcc gtcatcgccg ccatggtcac caccgcgaac gcttcgttga
      781 tctcgaacag gtccacgtcg ccgaccttcc agccagcctt ggccagcact ttctggatcg
      841 caccgaccgg cgcggtggtg aaccactgcg gctcctgcga gtgggtggcg tgggcgacga
      901 tgcgcgcgag tggctggatg ccgcgcgcct tcgcgtcgtc cgctgccagc aggatcaccg
      961 cggccgcgcc gtcggagatg cttgacgagc tggccgccgt gatcgtgccg ttttccttgc
     1021 ggaacgccgg cttcagcgtc gggatcttct cgatgttgga gcgcccgggc tgctcgtcgg
     1081 tgtcgatgac gacgtcgccc ttgcggccgg acaccgtcac cggcacgatt tcatcggcga
     1141 acgcgccgga ggcctgtgcg gccttggagc gcttgaccga ttcgatcgcg aatgcgtcct
     1201 gcgcttcgcg cgtgaagtgg tacttgtcgg cgcaggattc gccgaacacg cccatcgcct
     1261 tgccgtcgta cgggttggtc aggccgtccc aggccatgtg gtcgaccagc ttgccgtcgc
     1321 cgtagcggat gccggtacgt gcctgcacca tgtgcggggc gttggtcatc gactccatgc
     1381 cgccggcgac gacgatgctg gccgagccgg cacggatcag gtcgttgccg agcatgatcg
     1441 ccttcatgcc cgagccgcac accttgttga tggtggtgca accggcactc ggcggcagcc
     1501 cggcgccgaa cgatgcctgg cgcgccggcg cctgcccgag gttggcgggc agcacgcagc
     1561 ccatgatgac ctcgctgacg tcggccggcg ctacgccgga ttgcgccagc gccgcgcgga
     1621 tggccgcggc tcccagcgtg ggcgtcggca cgccggtgaa ctggccgagg aaggagccga
     1681 tggcggtgcg cttggcaccg gcgatgacaa tgctggaatc cgacatgaga gtctccgctt
     1741 gacgcaagct gttggaggtg gcgcggcgcg ccgatccgtc ctgcggatta tcgcagcgca
     1801 ccggaagggc ggcaaaccgc gccccgcacc cggcggtagc ttgcttgtgt cacacttcgc
     1861 gcgcagctgg tgggaggctg cgtccgcgct catgatccac cgcctgcgtt gcggtcgtga
     1921 gcgtcatcca agcagagcgc gatcggggat agatcatgga aactcgctgg aatatcaacc
     1981 tgcggcattt gccctgcggt cgcctggctt gcgccatcgg cctggcattg agtttggccg
     2041 cttgcggcgg tggcggcggt ggcggcctga aaccgacgcc cctgagtccg acaccgacac
     2101 cgactcccac cccgacgccc accccaacac cgactccgac gcccacccca acaccgactc
     2161 caacgcccac gcccaccccg gcgccaccac cgccaccgcc gctggatgcc cagctgggcc
     2221 tgaccaatac ctacgctgcc cacagccagg gcttcaccgg cagtggcgtc acgatcggca
     2281 tcgtcgacag cggcatcatg cgcaacaacc cgaccgtggc cggtcgagtg gtgcagcccg
     2341 aacagatcta cgtttcctcg ccgccaaaca acaccggcat cgacgacgtg gtgggccacg
     2401 gcacctgggt cgcgggcatc gcggcgggtg ctccgtttgc gaagttcccg ggcggcatcg
     2461 cgccaggcgc gagcctggtg tcggcacgca tcatcagcga cacgccgccc gccgacgatg
     2521 gttccggcca gggcaatccg gttacggcgt ccgatgcgct cttctttgcg caaacgctca
     2581 atccggcact catcagcgct ggcgtgcagg tgatgaacaa ctcctggggt ggcatttact
     2641 gggacaacag caatacctcg atcagccagg cgtttggcca ggcctatgtg ccgttcgtcg
     2701 tgcagcacgg cgggctggtg gtgtttgccg cgggcaactc gtcggccgcg aaccccagcg
     2761 atatcgcaag cctgccgacg ctggcgccga acctcgggct ggacaagggc tggctggtgg
     2821 cgaccgccgc cgacagcaac aacccgaccc agttggccag ctactcgaac cagtgcggcc
     2881 gggcgatgaa ttactgcctc accgctcccg gtgacgtcat cgtgctggac aaggacacgc
     2941 tggcgagcac cactgcgccg acttactggc aggtgggtgg cacctcgttt gcggcgccga
     3001 tggtttccgg cgccgcggcc ctggtgtggc aggcgtatcc gtatttcaac aacgacctcg
     3061 tgcgccagac cctgctcggt accgcgaccg acctcggtac ccccggcccg gatccggttt
     3121 tcggctacgg catgttgaac gtggggcgcg cggtgaatgg cccgatgcag ttcaactggg
     3181 gcgacgtgac ggtcgccttc accggctcgt cgagctggaa caacccgatt tccggcgcgg
     3241 gtgggctggt caagcaaggc agtggcacgc tcaacctgac ccagccttcg acctataccg
     3301 gcttgaccca ggtgcagggc ggcacgctca tggcgaaggc gctggctggc gcggcgacga
     3361 tcagcagtgg agcgacgctg ggcgggatga ccgccatcgg cggcaacgtc accaacggcg
     3421 gcacgctggc gctgggcacg tcgagcgtca acgtgggcgg caactacacc gagcaagccg
     3481 gcagcaccct gtcgctttcc gtcggctcga cgctcaacgt ggcgggtgcg gcgacgctgg
     3541 ccggcaacct gctggtgact ggcgtgaaca gcggctacac cccgaactcg cacaccaacg
     3601 tggtggtgac gcaagggggg ctgaccggca cgttcagcgg cgtcaccgcc gcgaccaacg
     3661 tgctgctggt ggcgacgccg ggatatgaca cgaagagcgc ctggctcaac gtcagcagcg
     3721 tcagcgccac cgcggtgcag ggcgcgagct acaccgcggc gtcctacggc gcggcgcagc
     3781 gcgtggacgc cgcattcggc cagctcgatg cgcaattggg cagcggcgcc ggtgcggccg
     3841 cggttggcag cgggttcctc ggcgcggcgg ggcaactgca gcacacggcc accgtggcgg
     3901 cgctgcaaag ctcgctggaa agcctgtccg gccagctgca cgcggccagc gcggcgatga
     3961 cgttcgaggc catcgacgct ggtacccgtg cgctgtcgca acgtttcgag caattgctgg
     4021 ctgcgccgca gccaggcgcg tgggcacaga gcctcggcta ccacggcgac atgtcccgca
     4081 gcggctatgg cggcgtgggc tatgacctgt ccggctggct ggtcggccgc gatttccgcg
     4141 ccggcaacgg cgtggctggc tttgccttga gccgcagcca gggcctgggc cggctggagg
     4201 aaagcgccga ccagggctac agccatgccg tcgagggcat ggtctacggc ggcgtcaccc
     4261 gcgatgcgtg gtatgcgatg ggccggttcg gcatcggcga ctaccagcag accatgcgcc
     4321 gccagctgca gctgggtgct gtcgccgatg gcgtggtcag cgccaaccgc gggcgctatg
     4381 gcgtggcata tggcgaaagc ggctaccggg tgatgctgga tggtaccgac gtgacgccgt
     4441 acgcctgcat ggagtacgcg cagatccgcc gtgacggctt cgacgagctg ggcggtggcg
     4501 gtttcgggct gaagtcggcg gcgctgacca cctcgcgctg gcaggcctgc ctcggcgtgc
     4561 gcgccagccg cagctggcaa ctgccgcgcg gcggcagcct caccctgcag ggccgggccg
     4621 attggcagca gtccttcggc ctgcacggcg aggtgttcga cgccagcttc accggcctca
     4681 accagtgggc accgctgggt ggcgtcggcc tgtcgcgcta cggcggccac gtcggcgccg
     4741 cgctcaactg ggacatcacc tcgcgcagca acctcgcgct gggctacgac cagtacagcg
     4801 gccagcgcga gcaggcgcgc atggcgacgc tggcgtaccg ctggtcgttc tgagtggcgg
     4861 gcggcgcggc gccggttcgt cgacgccgcg aggcatcacg ccaactccac ctcgataccg
     4921 gcgccgcgca gcgcctcgac cagttccggt gccgcctgct tgtcggtgat gaccttgtgc
     4981 agctggtgca ccggggcaat caccgacagg ctgcgctggc cgagcttgct ggcatccatt
     5041 accgcgatcg tgcgccgggc gacgcggatc attagcgcgt tgagcgccga ttcgagcgga
     5101 tccggcgtgg tcacgccgat ctccgggtcg aggccgtcca caccgaggaa cagtcggtcg
     5161 gcggacagct tcgacaacgc ttgctgcgcg tccgggccaa ccagggaata cgaggtggcg
     5221 cgcagcatgc cgcccagcat catcacgcgc acgccgggtt ggcccgacag ctccagcgcg
     5281 atgttgagcg cgttggtgat gacggtgagc gagtcgaact tgcgctggcg gatttgccgc
     5341 gcgatttcca tcgtggtcga accggagtcg aggatgatgg tctcgccatc gcggatgagt
     5401 cgggcggcgg ccgcaccaat gcgctgcttc tgcgcctgat gccgggtttc cttgatcgtg
     5461 accggagcgt cgttgctgac cggcaggcgc ggcagcgcgc cgccatgcga gcgcacgatg
     5521 gcggctgcgt tggccagcac atcgagatcg ccgcggatgg tgaccgccga ggtgccgaac
     5581 tgcctggcca gttcctgcac cgtggcacgg ccgtgctggt cgacgtactc ggcaatcagt
     5641 cggcggcgtt catcgggcaa caggtgcggg cgcggacgtt cgggtgattt gctcatggct
     5701 cgggcagatg aaaaaggcgg gcggcgttgg catggtaaac cttgcgcagc acctgttcgt
     5761 ccagccgcag gccatagatc gcccagcgcc cctgcggtgg cgtctccgcc ggggcgtagt
     5821 cgaagtattc gtcctcggtt tcgaggaacc ggtagtagat ctcgtacaac tcgtcgccaa
     5881 acagctgctg tggcacgtcg tccccccatg gcgacggcac ggcatcggtg ccgaacagga
     5941 tgcggtcctg gtagcggtcg aagaacttct gcgccagccg tggctggcgg cccagctcgc
     6001 cgacgcgcgc gctgatgtcc accagtgtgt tcgggaaccg atccaggcag gcggcgaccg
     6061 cggcgaggtt ttccgcgttg
//
LOCUS       DASSVL010000185         2100 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_654281, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000185 DASSVL010000000
VERSION     DASSVL010000185.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2100)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2100)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2100
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_654281"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1757
                     /locus_tag="VFM52_03185"
     CDS             <1..1757
                     /locus_tag="VFM52_03185"
                     /inference="COORDINATES: protein motif:HMM:NF012973.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009306 - protein secretion [Evidence IEA];
                     GO_process: GO:0044780 - bacterial-type flagellum assembly
                     [Evidence IEA];
                     GO_process: GO:0071978 - bacterial-type
                     flagellum-dependent swarming motility [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="flagellar biosynthesis protein FlhA"
                     /protein_id="HET8764202.1"
                     /translation="IEAFGHFIVGGNFAVGLVVFMILVVINFMVITKGAGRIAEVGAR
                     FMLDAMPGKQMAIDADLNAGLIKEDEARRRRAEVATEADFYGSMDGASKFVRGDAVAG
                     LVIMGVNIVGGLLVGMLQHGMSFAEAGHTYTLLTIGDGLVAQIPALVISTAAGVTVSR
                     VNTNQDVGEQVVDQLLSKPRVLWLAAGVLGLLGLVPGMPNAIFLFFTVSLAGLAWFLA
                     RREGRKTAEAQMQEKPAVAPEAPEASWEDVRLIDVLGLEVGHRLIPLVDYNQQGELLG
                     RIKGVRKKFAQEMGFLPPVVHIRDNLEINPNRYVVTLKGARVGGGEAYPGKWLAIDPG
                     QVTGELEGAATTDPAFGLPAKWIEADKREEAQILGYTVVDASTVVATHLNHLLHLHAG
                     EMLGRQEVQQLLDKVGAEHKALVEDVVPKTVSLAVLQKLLQNLLDESVSIRDMRTILD
                     TLAAQGGEQTNPAELTARVRVALGRAITDQWFGAERELRVIGLDTQLEQVLDQAIHGG
                     GAMEPGLADTLMQETAKALARQESSGEPSVLVVAPALRPLLARFLRRRLSQLAVLSQA
                     EIPDERGLRVTTLVGAMH"
     gene            complement(1900..>2100)
                     /locus_tag="VFM52_03190"
     CDS             complement(1900..>2100)
                     /locus_tag="VFM52_03190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8764203.1"
                     /translation="RNSSGVSAGSPASASLAPRLPFTGTQRRSMHNSAARVRPGGSAT
                     RHLTLRIIAPFAAAGAVNGALT"
BASE COUNT          329 a          676 c          761 g          334 t
ORIGIN      
        1 tgatcgaggc gttcggccat ttcatcgtcg gtggcaactt cgcggtcggc ctggtggtgt
       61 tcatgatcct ggtggtgatc aacttcatgg tcatcaccaa gggcgcgggg cgcatcgcgg
      121 aagtcggcgc acgcttcatg ctggacgcga tgcccggcaa gcagatggcg atcgacgccg
      181 acctcaatgc cggcctgatc aaggaagacg aagcccgccg ccgccgcgcc gaagtcgcga
      241 ctgaagcgga tttctacggc tcgatggacg gcgccagcaa gttcgtgcgt ggcgacgcgg
      301 tcgcgggtct cgtgatcatg ggcgtcaaca tcgtgggcgg cctgctggtc ggcatgctgc
      361 agcatgggat gtcgttcgcg gaagccgggc atacctacac gctgctgacc atcggcgacg
      421 gcctggtcgc acagattccg gcgctggtga tttccaccgc ggccggcgtc accgtgtcgc
      481 gcgtcaacac caaccaggac gtcggcgagc aggtggtcga ccagttgctc tccaagccgc
      541 gcgtgctgtg gctggcggcg ggcgtgctgg gcctgctggg cctcgtcccc ggcatgccga
      601 atgcgatttt cctgttcttc accgtgtcgc tggccgggct ggcgtggttc ctcgcgcgcc
      661 gcgaaggtcg caagaccgcc gaagcgcaga tgcaggaaaa acccgcggtg gcgccggaag
      721 cccccgaagc gagctgggag gatgtgcgcc tgatcgacgt gctgggcctc gaggtcggtc
      781 accgcctgat cccgctggtg gactacaacc agcagggcga actgctcggc cgcatcaagg
      841 gcgtgcgcaa gaagttcgcg caggaaatgg gcttcctgcc gccggtggtg cacatccgcg
      901 acaacctcga aatcaacccc aatcgctacg tcgtcacctt gaagggcgcg cgcgtcggtg
      961 gcggcgaggc gtatcccggc aagtggctgg cgatcgatcc gggccaggtg accggcgaac
     1021 tcgaaggtgc cgccaccacc gatcccgctt tcgggctgcc cgccaagtgg atcgaagccg
     1081 acaagcgcga ggaagcccag atcctcggct acaccgtggt cgacgccagc accgtggtcg
     1141 cgacgcacct caatcacctg ctgcacctgc acgccggcga gatgctgggg cgccaggaag
     1201 tgcagcaatt gctcgacaag gtcggcgcgg aacacaaggc gctggtcgag gacgtggtgc
     1261 ccaagacggt gtcgctggcg gtgttgcaga aactcctgca gaacctgctg gacgagtccg
     1321 tgtcgatccg cgacatgcgc acgattctcg acacgctggc cgcgcagggc ggcgagcaga
     1381 ccaacccggc cgagctgacc gcgcgggtgc gcgtggcgct gggtcgcgcg atcaccgacc
     1441 aatggttcgg cgccgagcgc gagttgcgcg tgatcgggct ggacacgcag ctcgaacagg
     1501 tgctcgatca ggcgatccac ggcgggggcg cgatggagcc gggcctcgcc gacacgctga
     1561 tgcaggaaac cgccaaggcg ctggcccgcc aggaatcctc gggcgagccg tcggtgctgg
     1621 tggtcgcgcc ggcattgcgg ccgctgctgg cgcgcttcct gcgccgccgg ctgtcgcaac
     1681 tcgcggtgct gtcgcaggcg gaaattccgg acgagcgcgg gttgcgcgtc accacgctcg
     1741 tcggggcgat gcattgagca ggcaagacgt gcgccttcgt cgatgcgtcg gcgccatctt
     1801 ggcttgcgtc gtggcgctgt ggtcgtgcac ggcgctggcc gcagccggaa gctggagcgc
     1861 cacggtggcg ggtccgcgcg tggcgggttc cggcaggctc tacgtgagcg cgccattgac
     1921 ggcaccggcc gcggcgaacg gtgcgatgat ccgcagcgta aggtggcgcg ttgcgctgcc
     1981 gcccggccgc accctcgccg ccgagttgtg catggaccgg cgttgcgtgc cggtgaaggg
     2041 aagccgtggc gccagcgatg cgctggctgg cgagcccgcg gatacgccgc tcgaattccg
//
LOCUS       DASSVL010000186         2901 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_611647, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000186 DASSVL010000000
VERSION     DASSVL010000186.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2901)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2901)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2901
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_611647"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1076)
                     /gene="mnmA"
                     /locus_tag="VFM52_03195"
     CDS             complement(<1..1076)
                     /gene="mnmA"
                     /locus_tag="VFM52_03195"
                     /EC_number="2.8.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015447509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_function: GO:0016783 - sulfurtransferase activity
                     [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiouridine(34) synthase MnmA"
                     /protein_id="HET8764204.1"
                     /translation="MRVMLGISGGVDSSVAALLLQQAGHAVEGLFMQNWEDDGRDGPC
                     TTDADRKDAVAVCGRLGIPFHARNFAREYWDGVFAHFLDEYRAGRTPNPDVLCNREIK
                     FKTFLDEARALGAEKIATGHYAQVDCVNGEYRLLRAVDQAKDQTYFLHTLGQTQLAAT
                     LFPIGALAKPRVRELARAAGLPTSAKKDSTGICFIGERDFRRFLARYLPGQPGEIRTP
                     DGKLVGEHQGAMYYTLGQRNGLGIGGRHGAGGAPWYVVGKDVAANQLIVAQGNANHWL
                     DSRRLRSEAPSWVAGRAPAARFRCSAKTRYRQPDQACEVTVAGNALEVRFDAPQRAVT
                     PGQSLVLYAGEVCLGGAVIAATDAP"
     gene            complement(1067..1558)
                     /locus_tag="VFM52_03200"
     CDS             complement(1067..1558)
                     /locus_tag="VFM52_03200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015447510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HET8764205.1"
                     /translation="MSPTASTAAIWRPHVAVACVVSDGARYLMVEEEAYGRLGYNQPA
                     GHLEDHEQLVDAARRETLEETGWTVEPTHLVGVYQWHSTEHGEGVVRFCFAARALSHD
                     PARPLDSGIRRALWLTRAEIAALGPRLRSPLILTSIDDWLAGARLPLDTLHWWPEPTA
                     SCG"
     gene            1675..2001
                     /gene="clpS"
                     /locus_tag="VFM52_03205"
     CDS             1675..2001
                     /gene="clpS"
                     /locus_tag="VFM52_03205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008209752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease adapter ClpS"
                     /protein_id="HET8764206.1"
                     /translation="MANQPENEQDGGRGLAVQTAKPEVARPPMFQVLLLNDDFTPMDF
                     VVEVLRGFFAMEQERAVQVMLHVHTRGKGVCGVFTREVAETKVSQVNEYSRAHQHPLL
                     CTMEKV"
     gene            2065..>2901
                     /locus_tag="VFM52_03210"
     CDS             2065..>2901
                     /locus_tag="VFM52_03210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016901749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Clp protease N-terminal domain-containing
                     protein"
                     /protein_id="HET8764207.1"
                     /translation="MFSKDLEVTIGQCYKQAREQRHEFMTVEHLLLALTSNQSALSAL
                     RACGIDLPRLTHELEKIIAETVPVLPHGDERDTQPTLGFQRVLQRAVYHVQSSGRKEV
                     TGANVLVAIFGEKDSHAVYLLQQQDITRLDVVNYLSHGIAKVGDGGEAKAQPEEKPEA
                     EGGEDAKGNPLHEFASNLNELAREGKIDPLIGREDEVERTIQVLCRRRKNNPLYVGDA
                     GVGKTALAEGLAKRIVEGQVPEVLSDAVIYSLDLGALVAGTKYRGDFEKRLKGVLAAL
                     KKV"
BASE COUNT          473 a          954 c         1028 g          446 t
ORIGIN      
        1 ggcgcgtcgg tggcggcgat caccgcgccg cccaggcaca cctcgccagc gtagagcacc
       61 agcgactggc cgggcgtgac ggcgcgctgg ggcgcgtcga aacgcacttc cagcgcgttg
      121 ccggcgaccg tgacttcgca cgcctggtcg ggctggcggt aacgcgtctt cgcgctgcag
      181 cggaaccggg cagccggcgc gcggccggcg acccagcttg gcgcctcgct gcgcaggcgg
      241 cgggaatcca gccagtggtt cgcgttgccc tgggcgacga tcaactggtt cgccgcgacg
      301 tccttgccca ccacgtacca cggcgcgccg cccgcgccgt ggcggccgcc gatgcccaga
      361 ccgttgcgct ggccgagcgt gtagtacatc gcgccctggt gctcgcccac cagcttgccg
      421 tcaggcgtgc ggatctcgcc cggctggccg ggcaggtagc gggcaaggaa gcggcggaaa
      481 tcgcgttcgc cgatgaaaca gatgccggtg gaatccttct tcgccgaggt cggcaggccg
      541 gccgcccgcg ccagttcgcg cacgcggggc ttcgccagcg cgccgatcgg gaacagtgtc
      601 gcggccaact gcgtttgccc cagcgtgtgc aggaaatagg tctggtcctt ggcctggtcg
      661 accgcacgca gcagccggta ctcgccattc acgcagtcga cctgcgcgta gtggccggtg
      721 gcgatctttt ccgcgccgag cgcgcgcgcc tcgtccagga aggtcttgaa cttgatctcg
      781 cggttgcaca gcacgtcggg gttcggcgtg cgcccggcgc ggtactcgtc gaggaagtgg
      841 gcgaacacgc cgtcccagta ttcgcgggcg aaattgcgcg cgtggaacgg aatgccgagc
      901 cggccgcaca ccgccacggc gtccttgcgg tcggcgtcgg tagtgcacgg gccgtcgcgg
      961 ccgtcgtcct cccagttctg catgaacagg ccttcgaccg cgtgtccggc ctgctggagc
     1021 agcaacgcgg cgaccgagga atcgacgccg ccggaaatac ccagcatcac ccgcatgatg
     1081 cggtgggttc cggccaccag tgcagggtgt cgagcggcag ccgcgcgccg gcgagccagt
     1141 cgtcgatgct ggtgaggatc agcgggctgc gcagacgcgg cccgagcgcg gcgatctcgg
     1201 cgcgcgtcag ccacaacgcg cgccggatgc cgctgtccag cggacgcgcc gggtcgtgcg
     1261 acagcgcgcg cgcggcgaag cagaagcgca ccacgccctc gccatgctcg gtgctgtgcc
     1321 actggtagac gccgacgagg tgggtcggtt cgaccgtcca gccggtttcc tccagcgttt
     1381 cgcgacgggc ggcgtcgacc agctgttcgt gatcttcgag gtggcctgcc ggctggttgt
     1441 agccgagccg gccatacgct tcctcctcga ccatgaggta gcgcgcgccg tcgctgacca
     1501 cgcaggcgac ggcaacgtgc gggcgccaga tggcggcagt ggaagcggtg ggagacatgg
     1561 cgtgcgcgac ttggaaagac gccattgtgc catcacctgt atcgcgggcc tgcagcgcgg
     1621 tcgggatcga cgcgctgcgt ataattgcag tcgttgcagg agtgcgtcgg atccatggcc
     1681 aatcaacccg aaaacgagca ggacggcggc cggggcctcg ccgtccagac ggcgaagccg
     1741 gaggtcgcgc ggccgccgat gtttcaagtt ctgctgctca atgacgattt cactcccatg
     1801 gacttcgtgg tcgaggtgct gcgcggcttt tttgccatgg agcaggagcg agcggtgcag
     1861 gtgatgttgc acgtgcatac ccgcggcaag ggggtgtgcg gggtgttcac gcgcgaggtg
     1921 gcggagacca aggtgagcca ggtcaatgag tattcacgcg cccatcaaca ccctttgttg
     1981 tgcactatgg aaaaggtcta ggcgccctta ctttgtagcc attgcggctt agccgcccac
     2041 gccacttgaa cggagacggt ccggatgttc agcaaggatc tcgaagtcac catcggccag
     2101 tgctacaagc aggcccgcga gcagcgccac gagttcatga ccgtggagca cctgctgctg
     2161 gcgctcacca gcaaccagtc cgcactcagc gccttgcgcg cctgcggcat cgacctgccg
     2221 cggctcaccc acgagctgga aaagatcatc gccgagacgg tgccggtgct gccgcatggc
     2281 gacgagcgcg acacccagcc cacgctcggc ttccagcgcg tgctgcagcg cgcggtgtac
     2341 cacgtgcaat cctccgggcg gaaggaggtc accggcgcca acgtgctggt ggcgatcttc
     2401 ggcgagaagg attcgcatgc ggtctacctg ctgcagcagc aggacatcac ccgcctggac
     2461 gtggtcaatt acctctcgca cggcatcgcc aaggtcggtg atggcggcga ggccaaggcg
     2521 cagccggagg agaagccgga agccgagggt ggcgaggatg ccaagggcaa cccgctgcac
     2581 gagttcgcca gcaacctcaa cgaactggcc cgcgagggca agatcgaccc gctgatcggc
     2641 cgcgaggacg aggtcgagcg caccatccaa gtgctctgcc gccggcgcaa gaacaacccg
     2701 ctttacgtgg gcgacgcggg cgtgggcaag accgcgctgg ccgagggcct ggccaagcgc
     2761 atcgtcgagg gccaggtgcc cgaggtcctg tccgacgcgg tgatctactc gctggacctg
     2821 ggcgcgctgg tcgccggcac caagtatcgc ggcgatttcg agaagcggct caagggcgtg
     2881 ctggcggcgc tgaagaaggt g
//
LOCUS       DASSVL010000187         2980 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_512839, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000187 DASSVL010000000
VERSION     DASSVL010000187.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2980)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2980)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2980
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_512839"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..584
                     /locus_tag="VFM52_03215"
     CDS             <1..584
                     /locus_tag="VFM52_03215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015446629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HET8764208.1"
                     /translation="NIRGGGEYGPAWHQAALKANRPKAYQDFAAVAKDLVRRGVTSAA
                     HLGAEGGSNGGLLMGNMLTQYPQLYGAIACEVPLLDMKRYIHLDAGASWMAEYGNPDD
                     PAQWQFIQTFSPYQNLYQGTHYPPVLFYTTTSDDRVGPAQARKMAAKMEGMGIPNVWF
                     YENLEGGHGAGADNKQSAHMHAMVYDFLWDKLK"
     gene            845..2053
                     /locus_tag="VFM52_03220"
     CDS             845..2053
                     /locus_tag="VFM52_03220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007082008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HET8764209.1"
                     /translation="MLSLLLLGAFLATPALAATATKKKAVHHTTTHKTEKSSRSKAPT
                     LVWRGDVTTARAVMDDMSREWQSSGHGRIELQPFNTASGIDAVASGSADLAGSARASD
                     GSAEDNQLTFTPVAWDALVMITNPANPVRNLTLRQLHEIYLGRITNWSQVGGHSAPID
                     LYAVISPNDGVEYSLRDLLFGRGTQQISAPRLYLNTKALEEGIALNPNGLGVSTLAAV
                     HTNPKLRTIPIEGVAPTVANIADGSYLLYTPLYLVTNPNSPKASEVKAFIDFLDTDKA
                     KKVLRDHSVLPYQDGIALAAQQAARRDKVYAAATASNAKPPLAAPGASYAAAAAIAPT
                     SERALAARKALDARNEAKATGSYTVADGDTLESIALDNHVSRANLQRWNHLKKGATLK
                     PGQVLRLSDK"
     gene            2058..2756
                     /locus_tag="VFM52_03225"
     CDS             2058..2756
                     /locus_tag="VFM52_03225"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019465914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HET8764210.1"
                     /translation="MRIRALTLDLDDTLWPVAPALERADHAVDDYLRAHWPQVAQAWP
                     IPAMRALRMQVAQAHPELAHDFTAQRQLTLREAFSRCGIAAAPIDTLWEIYFAQRNTV
                     TLYPDSLPALARLAARWPLASLTNGNADITRVGVQAHFRYAIAAREVGVGKPDPRIFQ
                     VAAQRLDVAATELLHVGDDPELDVLGARRAGLRTAWINRGNAAWPEALGAAPDITVRD
                     LGELVQQLEPFATA"
BASE COUNT          528 a         1107 c          948 g          397 t
ORIGIN      
        1 ccaacatccg cggcggcggc gaatacggcc cggcgtggca ccaggccgcg ctcaaggcca
       61 accggccgaa ggcgtaccag gactttgccg cggtggcgaa ggatctggtc aggcgcggcg
      121 tcacctcggc cgcgcacctc ggcgccgaag gcggctcgaa cggcggcttg ctgatgggca
      181 acatgctgac gcagtacccg cagctctacg gcgccatcgc ctgcgaggtg ccgctgctcg
      241 acatgaagcg ctacatccac ctcgacgccg gcgcctcgtg gatggccgaa tacggcaacc
      301 ccgacgatcc ggcccagtgg cagttcatcc agaccttctc gccgtaccag aacctgtacc
      361 agggcacgca ttacccgccg gtgctgttct acacgacgac cagcgacgac cgcgtcggcc
      421 cggcgcaggc gcgcaagatg gcggcgaaaa tggaaggcat gggcatcccc aacgtgtggt
      481 tctacgagaa cctcgagggc ggccacggcg ccggtgcgga caacaagcaa tccgcgcaca
      541 tgcacgccat ggtgtacgac ttcctgtggg acaagctgaa gtaaggccgg gctggggggg
      601 cgatgcacag cgcccgccgc gcgctgccgg tggcagcttc gttcaggcgg ccgcgcacac
      661 aatcgacgat ggtggcgccg acttcgcgac ccagtcggca tttgccgatg ccgcacgctt
      721 gaagtttgtt gccagtgccg atgaaatagc cggccaagca tgcgcccgcg gtggcatcgg
      781 cgggctgccc cctttcctcg accttcgcag gtttctcccc gccatgtccg ctcgtgtcgt
      841 tcgcttgctg tccctcctcc tgctcggcgc cttccttgcc acgccggcgc tcgccgccac
      901 cgccaccaag aaaaaggccg tccaccacac cacgacgcac aagacggaaa aaagcagcag
      961 gagcaaggcg ccgacactgg tctggcgcgg cgacgtcacc accgcgcggg cggtgatgga
     1021 cgacatgtcc cgcgaatggc agagcagcgg ccacgggcgc atcgagctgc agccgttcaa
     1081 caccgcctcc ggcatcgatg ccgtggccag cggcagcgcc gatctcgccg gcagcgcgcg
     1141 cgccagcgac ggcagcgccg aggacaacca gctgaccttc accccggtcg cctgggacgc
     1201 gctggtgatg atcaccaacc cggccaaccc ggtgcgcaac ctcaccctgc gccagctgca
     1261 cgagatctac ctcgggcgca tcaccaactg gagccaggtc ggcggccaca gcgcgccgat
     1321 cgacctgtac gccgtcatca gccccaacga tggcgtcgaa tacagcctgc gcgacctgct
     1381 gttcggccgc ggcacccagc agatttccgc gccgcgcctg tacctcaaca ccaaggcgct
     1441 ggaggaaggc atcgcgctca acccgaacgg cctcggcgtc tccaccctgg ccgcggtgca
     1501 caccaacccg aagctgcgca cgattccgat cgagggtgtc gcgccgacgg tcgccaacat
     1561 cgccgatggc agctacctgc tgtacacgcc gctgtacctg gtgaccaacc cgaacagccc
     1621 gaaggccagc gaggtcaagg cgttcatcga cttcctggac accgacaagg cgaagaaggt
     1681 gctgcgcgac cactcggtgc tgccgtacca agacggcatc gcgctggcgg cgcagcaagc
     1741 cgcgcgccgt gacaaggtgt acgccgcagc gaccgccagc aatgccaagc cgccgctggc
     1801 ggcaccgggc gccagctacg cggcggccgc agccatcgcg ccgacctccg agcgcgcgct
     1861 ggccgcgcgc aaggcgctcg atgcgcgcaa cgaggccaag gcaaccggca gctacaccgt
     1921 ggccgacggc gacacgctgg aaagcatcgc gctcgacaac cacgtcagcc gggcaaacct
     1981 gcagcgctgg aaccacctaa agaagggcgc cacgctcaag ccgggccagg tgctgcggct
     2041 cagcgacaag taagccggtg cgcatccgcg cactcacgct cgacctggac gacacgctgt
     2101 ggccggtcgc cccggcgctg gaacgcgccg accatgcggt ggacgactac ctgcgcgccc
     2161 attggccgca ggtggcgcag gcatggccga taccggccat gcgcgcgctg cgcatgcagg
     2221 tggcgcaagc ccatcccgaa ctcgctcatg atttcaccgc gcaacgccag ctgacgctgc
     2281 gcgaggcgtt cagccgctgc ggcatcgccg ccgcgccgat cgacaccctg tgggaaatct
     2341 atttcgcgca acgcaacacg gtgacgctgt atcccgacag cctgcccgcg ctggcgcgac
     2401 tcgccgcgcg ctggccgctg gcaagcctga ccaacggcaa tgccgacatc acgcgcgtcg
     2461 gcgtgcaggc gcatttccgc tatgccatcg cggcacgcga ggtgggtgtc ggcaagcctg
     2521 atccgcgtat tttccaggtc gcggcgcagc gcctcgacgt ggctgcgacc gagctgctgc
     2581 acgtgggcga cgatcccgag ctggacgtgc tcggtgcccg tcgcgccggc ctgcgcacgg
     2641 cctggatcaa tcgcggcaac gccgcatggc cggaagcgct cggcgccgcc ccggacatca
     2701 ccgtgcgcga tctcggcgag ctggtgcagc aactggagcc gttcgccacc gcgtgacccg
     2761 ctgcgcgcat cccgtcatca tggcggtttt cccacgtcat gaacgccatg cccagcctga
     2821 tcaaccgcac caccgcacca cgccgccgcg tcctcatcga aacggtcgac gcggcgcatc
     2881 tcgccgccac ccgcaagcgc ctcgacgccg cgcaacggcg ctggttcgac gccaatggct
     2941 tcgacgcccg gccgggcagc acgttgcgcc tcgcggatgc
//
LOCUS       DASSVL010000188         3441 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1318170,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000188 DASSVL010000000
VERSION     DASSVL010000188.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3441)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3441)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3441
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1318170"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            251..1135
                     /locus_tag="VFM52_03230"
     CDS             251..1135
                     /locus_tag="VFM52_03230"
                     /inference="COORDINATES: protein motif:HMM:NF015431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /protein_id="HET8764211.1"
                     /translation="MDYRALRYFVEVVRAGGFARASARAHASQPTLSKAIAQLEEECG
                     ARLLERGRRGVRLTAAGTLVHRHALAALADSERLRAELDALRGLKRGTLSLGLPPMGS
                     SVLFAPLLAHFRQQHPEIDIHLMEHGSRRLEQAVLDGELDVAATLLPVGAGFAYQAVR
                     DEPMLALLPQAHPRAGAKRFRFAWLAESPLILFEEGFALNRLIAAACEANGIVPRETV
                     RSSQVDFILALVAAGGGIALLPRLTVESRKLRGVVAVPLAGRDLRWRMVLAWRKGAQL
                     SPAAQAWLALVAKTTPDL"
     gene            1243..3375
                     /locus_tag="VFM52_03235"
     CDS             1243..3375
                     /locus_tag="VFM52_03235"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007513288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M13 family metallopeptidase"
                     /protein_id="HET8764212.1"
                     /translation="MSHPLLKPLALATAVALALTGCGKQEQAAAPAPASAKTAPAPAA
                     TVASATPSKDVFNVDELGASDEACKNFDNFVNAKWVAANPIPADHTSWGAFAELAEKS
                     LNTQHEIVEAAAKDANSAKAGSVAQKIGWLYASGMNDAAIEKAGFEPIKPQLTAIDGL
                     KNTADIVTYLDQVAAEGDGQVFGFSSGADFHDATMQIGYAMQGGLGLPTRDYYFKPEF
                     KAIRDAYVAYIAKTLELTGVSAADAAKQAGAVMKFETELAKASLAPTELRNLDNQYHF
                     VSVKEADKLTPHFNWEQFFKAQGVTIDKGFSLSQPKFFVEFDKLLASAPAAQWQAYLR
                     FHTIDDASSSLSKAFRDNKFDFYGKTLSGQPEQLPRWKQVLGGVNRAMGMGLGELYVA
                     KVFTPETKQRAEVLVTNVRDALKNRIEHLDWMSEATKAKAVDKWNKFLPKIGYPDEGE
                     WRDWSGLTISPDNWYANLEAAHKYNYQYDLAHIGKKTDRKEWGMTPQTVNAYYDPTTN
                     TINFPAAILQPPFFYAHGDDAINYGGIGAVIGHEASHGFDDQGSQFDGDGNRVDWWTP
                     ADKKAFDERTALLVKQFDAYAPIKDKPDLHVNGKLTLGENIADLGGLNIAYDALQTAL
                     KKDPAEADQKIDGYTQDQRFFLNWARVWRGNIREKQAELYLNVDPHSPASIRAIAAPS
                     DMSAFAKAFQCKTTDPMVRSGDKQVKIW"
BASE COUNT          634 a         1213 c         1118 g          476 t
ORIGIN      
        1 cacgagcagc acgccgagcg ccagtacgct gcccggcagc ggcaagttcg cggcatgcgc
       61 caggcgatcg cagcccaggc acaacgcggt gagcgcgacc acctgcagca ccagcgccag
      121 gcgcggctgg cgcatggaaa acaggcggat gcgggcgtgc agcgggttca tggctgggca
      181 gcctacgcag ccacgacgta tcatggaaat gaattgtttc catcctatct attcgaccaa
      241 ggcatacgtc atggattacc gcgccctgcg ctatttcgtc gaagtggtcc gcgccggcgg
      301 ctttgcccgc gccagcgccc gcgcccacgc cagccagccg acgctgagca aggcgatcgc
      361 ccagctggag gaggaatgcg gcgcgcgcct gctcgaacgc ggccgccgcg gcgtgcggct
      421 caccgcggcg ggcacgctgg tgcaccgcca cgcgctggcc gcgctggccg acagcgagcg
      481 cctgcgcgcc gagctggacg cattgcgcgg cctgaagcgc ggcacgctca gcctcggctt
      541 gccgccgatg ggatcgagcg tgctgttcgc gccgctgctg gcgcatttcc gccagcagca
      601 tccggagatc gacatccacc tcatggaaca cggcagccgc cggctcgaac aggcggtgct
      661 ggacggcgag ctggacgtgg ccgccaccct gctcccggtc ggcgccgggt ttgcctacca
      721 ggcggtgcgc gacgagccga tgctggcgct gctgccgcag gcgcatccgc gcgccggagc
      781 caagcggttt cgtttcgcct ggctggcgga gtcgccgctg atcctgttcg aggaaggctt
      841 cgcactgaac cggctgatcg ccgccgcgtg cgaggccaac ggcatcgtgc cgcgcgaaac
      901 cgtgcgcagc tcgcaggtgg acttcatcct ggcgctggtc gcggccggcg gcggcatcgc
      961 cctgttgccg cggctgacgg tggaatcgcg caagctgcgc ggcgtggtgg cggtgccgct
     1021 ggccgggcgc gatttgcgct ggcgcatggt gctggcgtgg cgcaagggcg cgcagctgtc
     1081 gcccgccgcc caggcctggc tggcgctggt ggccaagacc acccctgacc tttgacactg
     1141 ggcccgccgc atgccgcggc ctagcgtggg cggacctttg catcgggttc gcgtcgcgcg
     1201 cgcccgccct tgcgccaccc gccatccacg agagggaatt ccatgagcca cccgttgctg
     1261 aaaccgcttg cgctggccac cgccgttgcc ctggccctca ccggctgcgg caagcaggag
     1321 caggctgccg cgccggcccc ggcctccgcc aagaccgccc cggcaccggc cgccaccgtc
     1381 gccagcgcca cgccatcgaa ggacgtcttc aacgtcgacg aactgggcgc gagcgacgag
     1441 gcgtgcaaga acttcgacaa cttcgtcaac gccaagtggg tggccgccaa cccgattccg
     1501 gccgatcaca ccagctgggg cgcgttcgcc gagctggccg agaagagcct gaacacccaa
     1561 catgaaatcg tcgaggccgc cgccaaggac gccaacagcg ccaaggccgg ctcggtcgcg
     1621 cagaagatcg gctggctgta tgcgtcgggc atgaacgacg ccgccatcga gaaggccggc
     1681 ttcgagccga tcaagccgca gctcaccgcc atcgacggcc tgaagaacac cgccgacatc
     1741 gtgacctacc tcgaccaagt cgccgccgaa ggcgacggcc aggtgttcgg cttcagctct
     1801 ggcgcggatt tccacgacgc cacgatgcag atcggctacg ccatgcaggg tggcctcggc
     1861 ctgcccacca gggattacta cttcaagccc gagttcaagg cgatccgcga cgcctacgtg
     1921 gcctacatcg ccaagacgct ggaactcacc ggcgtgagcg cggcggacgc ggcgaagcag
     1981 gccggcgcgg tgatgaagtt cgagaccgag ctggccaagg cgtcgctggc gccgaccgag
     2041 ctgcgcaacc tcgacaacca gtaccacttc gtcagcgtga aggaagccga caaactcacc
     2101 ccgcatttca actgggagca gttcttcaag gcccagggcg tgaccatcga caagggcttc
     2161 tcgctgtcgc agccgaagtt cttcgtcgag ttcgacaagc tgctcgccag cgccccggcg
     2221 gcgcagtggc aggcctacct gcgcttccac accatcgacg acgcatcgag ctcgctgtcc
     2281 aaggcgttcc gcgacaacaa gttcgacttc tacggcaaga ccctttccgg ccagcccgag
     2341 caactgccgc gctggaagca ggtgctgggc ggcgtgaacc gcgcgatggg catgggcttg
     2401 ggcgagctgt acgtggccaa ggtgttcacc ccggaaacca agcagcgcgc cgaggtgctg
     2461 gtcaccaacg tgcgcgacgc gctgaagaac cgcatcgagc atctcgactg gatgagcgag
     2521 gccaccaagg ccaaggcggt cgacaagtgg aacaagttcc tgcccaagat cggctacccc
     2581 gatgaaggcg agtggcgcga ctggtccggc ctgacgattt ccccggacaa ctggtacgcc
     2641 aacctcgaag ccgcgcacaa gtacaactac cagtacgacc tggcgcacat cggcaagaag
     2701 accgaccgca aggaatgggg catgaccccg cagacggtca acgcgtacta cgaccccacc
     2761 accaacacca tcaacttccc ggccgccatc ctgcagccgc cgttcttcta cgcgcacggc
     2821 gacgacgcga tcaactacgg cggcatcggc gcggtgatcg gccacgaggc cagccacggc
     2881 ttcgacgacc agggcagcca gttcgacggc gacggcaacc gcgtcgactg gtggacgccg
     2941 gccgacaaga aggcgttcga cgagcgcact gcgctgctgg tcaagcagtt cgacgcctac
     3001 gcgccgatca aggacaagcc cgacctgcac gtcaacggca agctgacgct gggcgagaac
     3061 atcgccgacc tcggcggcct caacatcgcc tatgacgcgt tgcagaccgc gctgaagaag
     3121 gacccggccg aggccgacca gaagatcgac ggctacaccc aggaccagcg cttcttcctc
     3181 aactgggccc gcgtgtggcg cggcaacatc cgcgagaagc aggccgagct gtacctcaat
     3241 gtcgacccgc attcgccggc atcgatccgc gccattgccg ctccgtcgga catgagcgca
     3301 ttcgccaagg cgttccagtg caagaccacc gatccgatgg ttcgctctgg cgacaagcag
     3361 gtgaagatct ggtaagtcgc tccggccaag ccacgccagt cgcggcttga ccagaccaaa
     3421 ggccccgcac gcgagtgcgg g
//
LOCUS       DASSVL010000189         4285 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1021882,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000189 DASSVL010000000
VERSION     DASSVL010000189.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 4285)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4285)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4285
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1021882"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..898
                     /gene="rlmJ"
                     /locus_tag="VFM52_03240"
     CDS             <1..898
                     /gene="rlmJ"
                     /locus_tag="VFM52_03240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017462540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008649 - rRNA methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0070475 - rRNA base methylation [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="23S rRNA (adenine(2030)-N(6))-methyltransferase
                     RlmJ"
                     /protein_id="HET8764213.1"
                     /translation="GNFADVLKHAVLLALVEALKQKPAPFCVIDTHAGSGCYALGGVE
                     AGKTGEYKDGIARLMYPDLHTDHATAPALPPLLRRWLDGILALPGNEQGLALYPGSPL
                     QAAAALRPGDSAQLCELQPEEAARLRSVLHHDRRLHVHARDGYAALKALLPPPERRGL
                     VLIDPPYEAQEAEFDLVARALKEALARWPTGIYAVWYPIKRRSQVQPFLRWLGHCSAK
                     RVLCVELLVHPDDTPLRLNGSGMAILNAPWRLDEALREPLQALARLLGQGRPATTTLD
                     WLRSEADAAAPPAPLSRTPRRR"
     gene            931..1440
                     /locus_tag="VFM52_03245"
     CDS             931..1440
                     /locus_tag="VFM52_03245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007082635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Slp family lipoprotein"
                     /protein_id="HET8764214.1"
                     /translation="MHLAALPLRLALPALLLGLAACAPAPIYKATAATLVATPAQVAQ
                     TPERYAHAPVIWGGRIVGVKNFSDHSEIEVLAYPLDGSQRPKFSAPGNGRFIATVRGY
                     IEPMNYPAGAPITVDGQLAGTRGGKVGDADYLFPLVELAQSHVWSAEEMRGGHPNVHF
                     GVGLGVGIR"
     gene            complement(1457..2365)
                     /locus_tag="VFM52_03250"
     CDS             complement(1457..2365)
                     /locus_tag="VFM52_03250"
                     /inference="COORDINATES: protein motif:HMM:NF015651.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lysylphosphatidylglycerol synthase transmembrane
                     domain-containing protein"
                     /protein_id="HET8764215.1"
                     /translation="MNPLPSRWWRRARLGAGIGLLAFIVDRLGTGPFVAGVRALGPLP
                     IVVALAITAFTTALCAWRWRRLVMALGGELAWPAAIGAYYRSQFLDAILPGGILGDVH
                     RGLRRGRATGNLPRALQAVLLERLLGQAVQVLLALAALFACPLAVQRLLWPWVVAGML
                     VLLALWWARRTRRHVGRGRGFDLPAGWRQIGWCAWAAGAVASALAVGGYVALFFVAGV
                     AVGGRPAVGMWLPLALVVLAAAALPLNVAGFGPREGAAGWLFAMTGLGAANGVAVATA
                     YGLLSLVACSPGGVLLLADAWRARHA"
     gene            complement(2362..3420)
                     /locus_tag="VFM52_03255"
     CDS             complement(2362..3420)
                     /locus_tag="VFM52_03255"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF045194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HET8764216.1"
                     /translation="MSELAFVVPAGIDDAQRPSGGNLYDQHVRDGLRERGWQVREIAC
                     PGDWPAPDAAARAWLACGLAELAPGTTVLMDGLIACCVPAVLAAHASRLPIIVLLHMP
                     LGVPPTAGDAAIVAERERQALACARRVIVTSAWTGQWARAAGGVAGERIVVALPGVDA
                     APRAAPGMDGTRLLCVAAITLLKGHDVLLDALAMLRDATWQLACVGSAAVEPGFAQAL
                     RRRAADACIADRIVWHGVLHGAALERVWARSDLLVLASRKESYGMVVAEALVHGMPVI
                     ACGVGGVPEALGRAIDGALPGMLVPPNAPGPLAQALRQWLADPALRERWRMAASSRSA
                     GLPRWRDTLAAIEAALPA"
     gene            complement(3417..3815)
                     /locus_tag="VFM52_03260"
     CDS             complement(3417..3815)
                     /locus_tag="VFM52_03260"
                     /EC_number="4.1.2.50"
                     /inference="COORDINATES: protein motif:HMM:NF013411.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0070497 -
                     6-carboxy-5,6,7,8-tetrahydropterin synthase activity
                     [Evidence IEA];
                     GO_process: GO:0008616 - queuosine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="6-carboxytetrahydropterin synthase"
                     /protein_id="HET8764217.1"
                     /translation="MFSVTVRDHMMIAHSLHGAVFGPARQLHGATFVVDAGFRRAELD
                     ADGLVVDIGRAGEALRAVLAEFNFHNLDELPELAGRNTTTEALAQLVADRLAARIAAG
                     ELGAGASGLAGLVVTLHESHVAWASYERPL"
     gene            complement(3825..>4285)
                     /locus_tag="VFM52_03265"
     CDS             complement(3825..>4285)
                     /locus_tag="VFM52_03265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8764218.1"
                     /translation="VTLVDVDPSRAAVALALGVGFALPADAPRECATVFHASASATGL
                     QTALGLLGFEGRVVELSWYGDRRVELALGGAFHSRRLGIVASQVGHVAPARRGRCSRH
                     ERLALALAILRDPAFDVLLTGTSPFDALPDVMPRLADRSQPALCHVIAYP"
BASE COUNT          693 a         1641 c         1461 g          490 t
ORIGIN      
        1 gggcaacttc gccgacgtac tcaagcacgc cgtgctgctg gcgctggtcg aagcgctcaa
       61 gcagaaaccc gcgccgttct gcgtgatcga cacccacgcc ggcagcggct gctacgcgct
      121 cggcggcgtg gaggccggca agaccggcga gtacaaggac ggcatcgccc gcctgatgta
      181 tcccgacctg cacaccgacc acgcaacggc gccggccttg ccgccgctgc tgcgacgctg
      241 gctggacggc atcctcgcgc tgcccggcaa cgagcagggg ttggcgctgt atcccggctc
      301 gccgctgcag gccgcggccg cgctgcggcc cggcgacagc gcgcagctgt gcgaactgca
      361 gccggaggaa gccgcgcgcc tgcgcagcgt gctgcatcac gatcgccggc tgcacgtgca
      421 tgcgcgcgac ggctacgccg cgctcaaggc gctgctgccg ccgccggaac gccgcgggct
      481 ggtgctgatc gacccgccct acgaggcgca ggaagccgaa ttcgatctcg tcgcccgcgc
      541 gctgaaggaa gcgctcgcgc gctggccgac cggcatctat gccgtttggt atccgatcaa
      601 gcggcgcagc caggtgcaac cgttcctgcg ctggctcggt cactgcagcg cgaaacgcgt
      661 gctgtgcgtc gagctgctgg tgcacccgga cgacacgccg ctgcgcctga acggttcggg
      721 catggccatc ctcaatgcac cgtggagact ggacgaagcc ctgcgcgaac cgctgcaggc
      781 gctggcccgg ctgctgggcc aggggcgccc cgccaccacc acgctcgact ggctgcgcag
      841 cgaagccgac gccgccgcgc cgcctgcgcc gctgtcgcgc accccgcgcc gccgctaagc
      901 tggttggcac cgcgccaccg gagcctcgcc atgcatcttg ccgccctgcc gctacgcctc
      961 gccctgcccg cgctgttgct cggcctcgcc gcctgcgcgc cggcaccgat ctacaaggcc
     1021 actgcggcca ccctcgtcgc cacgccggcg caggtcgcgc agacgccgga gcgctacgcc
     1081 catgcgccgg tcatctgggg cgggcgcatc gtcggcgtga aaaacttctc cgaccacagc
     1141 gagatcgagg tgctggccta cccgctggat ggttcccagc ggccgaaatt cagcgccccg
     1201 ggcaacggcc gcttcatcgc caccgtgcgc ggctacatcg agccgatgaa ttacccggcc
     1261 ggcgcgccga tcaccgtcga cggccagctc gccggcaccc gtggcggcaa ggtcggcgac
     1321 gccgactacc tgttcccgct ggtcgagctt gcgcaatcgc acgtgtggag cgccgaggaa
     1381 atgcgcggcg gccacccgaa tgtgcacttc ggcgtcggcc tgggcgtcgg catccgctga
     1441 atcgcgtagg caccgctcag gcgtggcgtg cgcgccacgc gtcggccagc agcaacacgc
     1501 cacccggcga gcaggcaacc aggctgagca ggccgtaagc cgtcgcgacg gccacgccgt
     1561 ttgccgcgcc cagtcccgtc atcgcgaaca accagccggc ggccccttcc cgcggtccga
     1621 agccggcgac gttgagtggc agcgcggcgg ccgccagcac caccagggcg agcggcaacc
     1681 acataccaac cgcaggccgc cccccaacgg cgacacccgc cacgaagaag agcgccacgt
     1741 agccgccgac ggccagcgcc gaggccaccg caccggcggc ccaggcgcac cagccaatct
     1801 gtcgccaacc ggcgggcagg tcgaacccgc gtccgcgacc aacgtgccgg cgtgtacgac
     1861 gtgcccacca cagcgccagc agcaccagca tgccggcgac gacccatggc cacagcaggc
     1921 gctgcacggc gagcgggcag gcgaacagtg cggccaacgc cagcagcact tgcacggcct
     1981 gccccagcag gcgttccagc agcacggcct gcagcgcgcg cggcaggttg ccggtggcac
     2041 gcccacggcg caggccacga tggacgtcgc ccagtatgcc gcccggcaag atggcgtcga
     2101 ggaattggga acggtaatag gcgccgatcg ccgccggcca cgccagctcg ccaccgagtg
     2161 ccatcaccag tcgacgccag cgccaggcac acaaggccgt ggtgaacgcg gtgatggcca
     2221 gcgccacgac gatgggcagc gggccgagcg cacgcacgcc ggcgacaaac ggcccggtgc
     2281 cgagacggtc gacgatgaac gcaagcaggc cgatgccggc gcccaggcgc gcgcgacgcc
     2341 accagcgcga cggcagcgga ttcatgccgg caacgccgcc tcgatcgccg ccagcgtgtc
     2401 gcgccagcgt ggcaacccgg cgctgcgcga ggatgccgcc atgcgccagc gctcgcgcag
     2461 tgcgggatcg gcaagccatt ggcgcagggc ttgcgcgagt gggccggggg cgttgggcgg
     2521 taccagcatg ccgggcagcg cgccgtcgat cgcgcggccc agtgcttcgg gcacgccgcc
     2581 gacgccgcag gcgatcaccg gcattccgtg caccagcgcc tcggccacga ccatgccgta
     2641 ggactccttg cgcgaagcca gcaccagcag gtcggatcgc gcccagacac gctcgagcgc
     2701 ggcgccgtgc aaaacgccgt gccagacgat gcgatcggcg atgcaggcat ccgccgcgcg
     2761 gcgacgcagg gcctgcgcaa agccgggctc gaccgccgcg ctgccgacgc acgcaagctg
     2821 ccacgttgca tcgcgcagca tcgccagcgc gtccagcaac acgtcatgcc ccttgagcag
     2881 ggtgatcgcc gccacgcaca gcagccgcgt cccatccatt cccggcgccg cgcgcggtgc
     2941 cgcatcgacg ccgggcagcg ccacgacgat gcgctcaccc gccacgccgc ctgccgcgcg
     3001 cgcccattgt ccggtccatg cgctggtgac gatcacccgc cgcgcacacg cgagtgcctg
     3061 gcgctcgcgt tcggccacga tggccgcgtc gccggccgtc ggcggcacgc cgagcggcat
     3121 gtgcagcaac acgatgatcg gcaggcgcga tgcgtgcgcc gccagcacgg ccggcacgca
     3181 acacgcgatg agcccgtcca tcaggacggt ggtgcccggc gcgagctcgg caaggccgca
     3241 tgccagccat gcacgggcgg cggcatccgg agccggccag tcgccgggac aggcgatttc
     3301 acgcacctgc cagccgcgct cgcgcaggcc gtcgcgcacg tgctggtcgt agagattgcc
     3361 gccactcggg cgttgcgcgt cgtcgatgcc ggccggcacg acgaaggcca gctcgctcac
     3421 agcgggcgct cgtagctcgc ccacgcgacg tgggattcat gcagggtcac gaccagcccg
     3481 gcgagcccgc ttgcgccggc acccagttcg ccggcggcaa tacgcgcggc gagccggtcg
     3541 gcgacgagct gcgcgagggc ctcggtcgtg gtgttgcgcc cggccagctc cggcagctca
     3601 tcgagattgt ggaaattgaa ttcggccagc accgcgcgca gcgcttcacc cgcacgcccg
     3661 atgtcgacga cgagaccgtc ggcatccagc tcggcacggc gaaaacccgc atcgacgacg
     3721 aacgtcgccc cgtgcaactg ccgcgccggg ccaaacaccg cgccgtgcag gctgtgcgca
     3781 atcatcatgt ggtcccgtac cgtcacgctg aacatggcac ctcctcatgg gtaggcaatg
     3841 acgtggcaca gcgccggctg gctgcggtcg gcaaggcgcg gcatcacgtc cggcagcgcg
     3901 tcgaacggcg aagtgccggt gagcagcacg tcgaacgccg gatcgcgcag gatcgccagc
     3961 gccagcgcga ggcgttcgtg ccggctgcag cggccgcgcc gcgccggcgc gacgtggccg
     4021 acctggctgg cgacgatgcc gagccggcgc gaatggaacg cgccacccag cgccagctcg
     4081 acgcgccgat cgccatacca gctcagctcg acgacgcgcc cctcgaagcc aagcaggccg
     4141 agcgccgtct gcaagccggt tgcactcgca ctggcgtgga acacggtggc gcactcgcgc
     4201 ggcgcatctg ccggcaacgc aaagccgaca ccgagcgcca gcgccaccgc cgcgcgcgac
     4261 ggatcgacat ccaccagcgt cacct
//
LOCUS       DASSVL010000190         2386 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_527052, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000190 DASSVL010000000
VERSION     DASSVL010000190.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2386)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2386)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2386
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_527052"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..693)
                     /gene="gltX"
                     /locus_tag="VFM52_03270"
     CDS             complement(<1..693)
                     /gene="gltX"
                     /locus_tag="VFM52_03270"
                     /EC_number="6.1.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017460426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009332 - glutamate-tRNA ligase complex
                     [Evidence IEA];
                     GO_function: GO:0004818 - glutamate-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006424 - glutamyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--tRNA ligase"
                     /protein_id="HET8764219.1"
                     /translation="MTIRTRFAPSPTGFLHIGGARTALYCWLEARRHGGQFVLRIEDT
                     DRERSTDAAVKAILDAMAWLDLSADEAPVYQTQRLARYREVADRLLAEGKAYYAYESK
                     EEIEAMREAAMAKGEKPRYNGYYRDRNEPYRDDPNRVIRFKNPKDGVVAFEDKVKGRI
                     EIANSELDDLVIFRSDGWPTYNFAVVVDDIDMGVTEVIRGDDHVNNTPRQINIYHALG
                     APVPEFAHLPMIL"
     gene            complement(776..1978)
                     /locus_tag="VFM52_03275"
     CDS             complement(776..1978)
                     /locus_tag="VFM52_03275"
                     /inference="COORDINATES: protein motif:HMM:NF015541.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HET8764220.1"
                     /translation="MRKATVVRGVVLLVLALSTPWLALAAPPAADVAAPAPGALLSVV
                     ATAVPATLPHAATRDVIIYRSRGVQGEPIVVSGYALLPAGSPPRGGWPVLAWAHGTTG
                     IADTCAPSGDYAGGPIHAYESAMEAALDWWLARGYAVVATDYQGLGTPGGHPYMDATS
                     QLHTVDDAVRALHALRPGAFSPDWLVMGHSQGGAAALSVAAHGQADLPQFKLRGAIAI
                     APGGYRYSAILDYLKANPHPPVGVALFFPIMLEGAQAADPKLDVEQLISPDLQPLMDL
                     ARSRCLAELRTEVKQAPQAVFKPGADLAPLTAYLDRQAIEHLQPTVPVMFVQGSADQL
                     VDARGTQAYYRQICAADATAFYHGVTNGSHGDALAQSPAAAGDFLAFLAGEPGLKSCA
                     AVPAAPVP"
     gene            complement(2000..>2386)
                     /locus_tag="VFM52_03280"
     CDS             complement(2000..>2386)
                     /locus_tag="VFM52_03280"
                     /inference="COORDINATES: protein motif:HMM:NF024591.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid--CoA ligase family protein"
                     /protein_id="HET8764221.1"
                     /translation="DGWLHTGDIGFVDAEGFLHVVDRIKDVINRNGEKIASAEIESCL
                     LQHPQVQEAVVFAQPDETTGEAVVAVVVARSGASLTAEAVRAHVAARLAAYKVPRDIY
                     IHAGPLPRSPSGKLLKRAVKREYLEP"
BASE COUNT          351 a          821 c          827 g          387 t
ORIGIN      
        1 caggatcatc ggcaggtgcg cgaactccgg caccggcgca ccgagcgcgt ggtagatgtt
       61 gatctgtcgc ggcgtgttgt tgacgtggtc gtcgccgcgg atcacctcgg tgacgcccat
      121 gtcgatgtcg tccaccacca cggcgaagtt gtaggtcggc cagccgtcgg agcggaagat
      181 caccaggtcg tccagctcgc tgttggcgat ctcgatgcgg cccttcacct tgtcctcgaa
      241 cgccaccacg ccatccttcg ggttcttgaa gcggatgaca cggttcgggt cgtcgcgata
      301 cggctcgttg cgatcgcggt agtagccgtt gtagcgcggc ttttcgccct tcgccatcgc
      361 ggcctcacgc atcgcctcga tctcttcctt gctctcatag gcgtagtacg ccttgccttc
      421 ggcgagcagg cggtcggcca cctcccgata gcgcgcgagg cgctgggtct ggtacaccgg
      481 cgcctcgtcg gcggacagat ccagccacgc catcgcgtcg agaatcgcct tcaccgcggc
      541 gtcggtcgag cgctcgcggt cggtgtcctc gatgcgcagc acgaactgcc cgccgtgccg
      601 ccgcgcctcc agccagcagt acagcgcagt gcgcgcgccg ccgatgtgca ggaacccggt
      661 ggggctgggg gcgaagcggg tacggatggt catggcttgc ggttggttgc ggcaaagccg
      721 gtgattttag ccgatgcacc ggttgtcgcg cggcaaacgc agcttccccc ggcgcttatg
      781 gcacgggcgc ggccggcact gccgcacacg atttcagccc gggttcgccg gcaagaaacg
      841 caagaaagtc ccccgctgcc gccgggcttt gcgccagcgc atcgccgtgg ctgccgttcg
      901 tcacgccgtg atagaacgcg gtggcatcgg cagcgcagat ctgcctgtag taggcctgcg
      961 tgccgcgcgc atcgaccagc tggtcggcgc tgccctgcac gaacatcacc ggcaccgttg
     1021 gctgcaggtg ctcgatcgcc tggcggtcga ggtaggcggt gagcggtgcg aggtcggcgc
     1081 cgggcttgaa caccgcctgc ggtgcctgct tgacttcggt acgcaactcg gccaggcagc
     1141 ggctgcgggc gagatccatc agcggctgca ggtcagggct gatgagctgc tccacgtcga
     1201 gcttcgggtc ggcggcttgc gcgccttcga gcatgatcgg gaaaaacagc gcgacgccga
     1261 ccggcgggtg cgggtttgcc ttgaggtaat ccaggatggc cgagtagcgg tagccgcccg
     1321 gcgcgatggc gatcgccccg cgcagcttga attgcggcag gtcggcctgg ccgtgtgccg
     1381 ccaccgacag cgccgcggcg ccgccctggc tgtggcccat caccagccaa tccggactga
     1441 acgcgcccgg gcgaagggcg tgcagcgcgc gcaccgcgtc gtccaccgtg tgcagctggc
     1501 tggtggcatc catgtacgga tgcccgcccg gcgtgcccag accctggtaa tcagtggcga
     1561 ctaccgcgta gccgcgggcc agccaccagt cgagcgcggc ttccatcgca ctctcgtaag
     1621 catggatcgg gccgcccgca tagtcgccgg aaggcgcgca ggtatcggcg atgccggtgg
     1681 tgccgtgtgc ccacgccagc accggccagc cgccacgtgg cggcgagccg gccggcagca
     1741 aggcatagcc ggaaaccacg atcggctcgc cctgcacgcc gcggctgcga tagatgatga
     1801 cgtcgcgcgt ggcggcatgc ggcaaggtgg ccggcacggc agtcgccacc accgacagca
     1861 gcgcgccggg cgccggcgcg gcgacgtccg ccgccggggg ggcggccaac gccagccacg
     1921 gcgtggacaa ggccagcacc agcagcacca cgcccctcac caccgtcgct ttgcgcatcg
     1981 caggttctcc ggccgtgtct cagggttcga ggtattcgcg cttgaccgca cgcttgagca
     2041 gcttgccgct gggactgcgc ggcagcggcc cggcatggat gtagatgtcg cgtggcacct
     2101 tgtacgccgc cagccgcgcg gcgacatgcg cgcgcaccgc ctcggcggtg aggctggcgc
     2161 cgctgcgcgc aacgaccacg gccaccacgg cctcgccggt ggtttcgtcg ggctgggcga
     2221 acaccaccgc ctcctgcacc tgcggatgct gcagcaggca ggattcgatt tccgccgagg
     2281 cgatcttctc gccgttgcgg ttgatcacgt ccttgatgcg gtcgacgacg tgcaggaaac
     2341 cttcggcatc cacgaagccg atatcgccgg tatgcagcca gccgtc
//
LOCUS       DASSVL010000191         2154 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1190862,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000191 DASSVL010000000
VERSION     DASSVL010000191.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2154)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2154)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2154
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1190862"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1772
                     /locus_tag="VFM52_03285"
     CDS             <1..1772
                     /locus_tag="VFM52_03285"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HET8764222.1"
                     /translation="AVFIPIGFMGGLTGSLFTEFAFTLVATVIVSMIVALTLTPMLCS
                     KVLRRTPAHGLTHTLDAGFARLRGAYDRSLHAVLDARPAVLAAGACVLASIPFLFLGT
                     HGELAPTEDQGTVLVSGTGPATATLKYLDKYNEQIHQILAGFPETGLVWQIGGLAPSG
                     GAGNNAVFGGANLKPWGQRSRTQMQILPLIQQKLNAVTGLQTVAFARPTLPGSSGGLP
                     IQFVLMSTHGYAQMNADADNLIGAAMKTGQYTFLTKDLHYDAPTISLDVKRDVAADLG
                     LDMATIGANLGALLSENYVGRFDMSGHSYEVIPQVPDALRANANALGDYYLRTSSGKL
                     VPLTTVVDVRRGVQPEYLPQFQQQNSVTIQGTMAPGVTLGQALATLKSLAAKDLPTGY
                     AVDYASESRQFIRQGNTVIVTFGLSILLVYLLLAAQFESFRDPLIVLVAVPMSVFGAL
                     AFLFLGAATLNIYTEVGLITLIGLITKQSILIVQFANVMQEEQGLDRQTAAERASSIR
                     LRPILMTTGAMVLGVVPLLLATGPGAVSRFDMGLVIATGLTIGALISLYVVPVIYTYV
                     ATDKAAAADKLVTSNEPTQVPGL"
     gene            complement(1797..>2154)
                     /locus_tag="VFM52_03290"
     CDS             complement(1797..>2154)
                     /locus_tag="VFM52_03290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017460439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HET8764223.1"
                     /translation="VVVTGSPVLLARAVRNLLSNAVKFSPDGGSVEVGVRAVGGMAEC
                     VVRDHGPGVPGAELASLFRPFFRGTNAARADGHGLGLAIAQRVARAHGGEIVARNAAG
                     GGLEVTLRVPRAAAMA"
BASE COUNT          345 a          771 c          708 g          330 t
ORIGIN      
        1 tcgcggtgtt catcccgatc ggcttcatgg gcgggctgac cggcagcctg ttcaccgagt
       61 tcgcgttcac cctggtggcg acggtgatcg tgtcgatgat cgtcgcgctg acgctgaccc
      121 cgatgctgtg ctcgaaggtg ctgcgccgca cgccggcaca cggcctgacc cacacgctcg
      181 acgccggctt cgcgcgcctg cgcggcgcct acgaccgctc gctgcacgca gtgctcgacg
      241 cacggcctgc cgtgctggcc gccggcgcgt gcgtgctggc cagcattccg ttcctgttcc
      301 tcggcacgca cggcgagctg gcaccgaccg aggaccaggg caccgtgctg gtgtccggca
      361 ccggcccggc gacggcgacg ctgaaatacc tcgacaagta caacgagcag atccaccaga
      421 tcctcgccgg ctttccggaa accgggctgg tgtggcagat cggcggcctc gcaccgtccg
      481 gcggcgccgg caacaacgcg gtgttcggcg gcgcgaacct caagccgtgg ggccagcgct
      541 cgcgcacgca gatgcagatc ctgccgctga tccagcaaaa gttgaacgcg gtgaccgggc
      601 tgcagaccgt ggcgtttgcg cggccgacgc tgcccggctc gtccggcggc ctgccgatcc
      661 agttcgtgct gatgtcgacc cacggctacg cgcagatgaa cgccgatgcc gacaacttga
      721 tcggcgcggc gatgaagacc gggcagtaca ccttcctcac caaggacctg cactacgacg
      781 cgccgacgat ctcgctggac gtgaagcgcg acgtggccgc cgacctcggg ctggacatgg
      841 cgacgatcgg cgcgaacctc ggcgcgctgc tcagcgaaaa ctacgtcggc cgcttcgaca
      901 tgagcggaca cagttatgag gtgatcccgc aggtgcccga cgcgctgcgc gcgaacgcga
      961 acgcgctcgg cgactattac ctgcgcactt ccagcggcaa gctggtgccg ctgaccacgg
     1021 tggtcgacgt caggcgcggc gtgcagcccg aatacctgcc gcagttccag caacagaact
     1081 cggtgaccat ccagggcacg atggcccccg gcgtcacgct cggccaggca ctggcaacgc
     1141 tgaagagcct cgcggcgaag gacctgccga ccggctacgc agtcgactac gcgagcgaat
     1201 cgcggcagtt catccgccag ggcaacaccg tcatcgtgac gttcggcttg tcgatcctgc
     1261 tcgtgtacct gctgctcgcc gcgcagttcg agagcttccg cgacccgctg atcgtgctgg
     1321 tggcggtgcc gatgtcggtg ttcggcgcgc tggccttcct gttcctcggc gcggcgacgc
     1381 tcaacatcta caccgaggtt ggcctgatca cgctgatcgg gctgatcacc aagcagagca
     1441 tcctgatcgt gcagttcgcg aacgtgatgc aggaggagca aggcctcgat cgccagaccg
     1501 ccgccgagcg cgcgtccagc atccgcctgc gcccgatcct gatgaccact ggcgcgatgg
     1561 tgctcggcgt ggtgccgctg ctgctcgcca ccgggccggg cgcagtgagc cgcttcgaca
     1621 tgggcctggt gatcgccacc ggcctcacca tcggcgcact gatctcgctc tacgtggtgc
     1681 cggtgatcta cacctacgtc gccaccgaca aggctgccgc agccgacaag ctggtgacat
     1741 cgaacgagcc gacccaggtg cctggcttgt aggtcgggtt tcatccctcc aggtaatcac
     1801 gccatggcgg ctgcccgcgg cacgcgcagg gtgacttcga ggccgccgcc cgcggcattg
     1861 cgggcgacga tctcgccgcc gtgtgcgcgc gccacgcgct gcgcgatggc caaccccagc
     1921 ccgtggccat cggcgcgcgc cgcattggtg ccgcggaaaa acggccggaa caacgaagcc
     1981 agctcggccc cgggcacgcc ggggccgtga tcgcgcacga cacattcggc catgccgccg
     2041 acggcgcgca cgccgacctc gacgctgccg ccgtcgggac tgaacttgac cgcgttggac
     2101 aacaggttgc gcactgcgcg cgccagcagc accgggctgc cggtcaccac cacc
//
LOCUS       DASSVL010000192         3153 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1233557,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000192 DASSVL010000000
VERSION     DASSVL010000192.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3153)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3153)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3153
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1233557"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..422)
                     /locus_tag="VFM52_03295"
     CDS             complement(<1..422)
                     /locus_tag="VFM52_03295"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HET8764224.1"
                     /translation="MAISQPSTPPLVSREATQAKLDRRSAAAAHYRASQTDCIAECLE
                     AGARAHRDRPALQYGGSALSYAELNAAANRAAHALHAQGVRRGEVVALCLENRPAFFE
                     VWLGLMKLGAIAVFLNTNVRGKPLAHELTTTGVRRVVVG"
     gene            complement(444..1625)
                     /locus_tag="VFM52_03300"
     CDS             complement(444..1625)
                     /locus_tag="VFM52_03300"
                     /inference="COORDINATES: protein motif:HMM:NF012656.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HET8764225.1"
                     /translation="MFVDLTPEQHALRRRVRDYFNALMTPDLRASLRGAEGGDTFRRV
                     VRQMGQDGWLAVGWPKEYGGQGYAATEQLIFFEEANIAGAPLPFVTISTVGPALMLHG
                     SAAQKARFLPGIAAGEIVFAIGYSEPAAGSNLAALKTQAQLVGDLETGHFTVNGSKLW
                     TSGAESADFIWLAARTSTELPRHKGISILIVDTHARGFSTTPIATVGNLTAATYYDNV
                     EVPADQLVGALHGGWKLITAQLNHERLGLGAWSDKVFGPFSRVLAWAKAPDEDGRRAI
                     DAPWVRRAFAECYQRLEAMRITNFRIAAGLEAGEVDVALASITKVYGTESVLEILRRL
                     QEIVGAGALVRVDSSAAFLAGELEYEIRANTINTFGGGANEIQRELIAQFGLGLPRVQ
                     H"
     gene            complement(1635..2813)
                     /locus_tag="VFM52_03305"
     CDS             complement(1635..2813)
                     /locus_tag="VFM52_03305"
                     /inference="COORDINATES: protein motif:HMM:NF005892.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid-transfer protein"
                     /protein_id="HET8764226.1"
                     /translation="MTNHGIADRAAIVGLGATEFSKNSGRTEIRLAMEATLAALADAG
                     IDPADVDGFCSYTIDKVPEYEIARLLGARNVTFFSQIPHGGGAACAPVLHAAMAVATG
                     VAKTVVVYRAMNERSWYRFGSGSYGFAATPTVENVNYGWYMPSGLHTPASWVAMAAQR
                     YMYRYGATSEDFGRVAVAVRDFAATNPAAFFYQKPITLADHQHSKWICEPLHLLDCCQ
                     ESDGAVAMVITSLDRARDLRQKPVVVKAAAQGIHEGQQIMTSFYRDDITGLPEMGLVA
                     NQLWAQSGLTPADIQTAVIYDHFTPFVLLQLEEFGFAGRGEAKDFIRAGHHARGGKLP
                     INPHGGQLGEAYIHGMNGVAEGVRQVRGSAVNQVANVEHVLVTAGTGVPTSGLILGTA
                     "
     gene            complement(2810..>3153)
                     /locus_tag="VFM52_03310"
     CDS             complement(2810..>3153)
                     /locus_tag="VFM52_03310"
                     /inference="COORDINATES: protein motif:HMM:NF013722.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="MaoC/PaaZ C-terminal domain-containing protein"
                     /protein_id="HET8764227.1"
                     /translation="VPLIAGGAIATRDYFPGHHDAEAARALGSPHIFMNILTTNGLVE
                     RFVEGWAGPACRLASVKIKLGAPNYPGDTLTFSGAVTGRDEAGHSVEVTLKGANSMGP
                     HVTGTVRVKLP"
BASE COUNT          449 a         1091 c         1118 g          495 t
ORIGIN      
        1 cccaccacca cgcggcgcac gccggtggtg gtcaactcat gcgccagcgg cttgccgcgc
       61 acgttggtgt tgaggaacac ggcaatggcg ccgagcttca tcagccccag ccacacctcg
      121 aagaacgccg gccgattctc caggcacagc gccaccacct cgccgcgccg cacgccctgc
      181 gcgtgcagcg catgcgcggc gcgattcgcc gccgcgttca actcggcata gctcaacgcc
      241 gacccgccat actgcaaggc ggggcgatca cggtgcgctc gcgcgccggc ttcgagacat
      301 tcggcgatgc agtcggtctg cgaggcgcga tagtgcgccg ccgccgcgct gcgccggtcg
      361 agcttggcct gggtggcctc gcgcgaaacc aggggcggcg tggatggttg cgaaatggcc
      421 atgcgttctg ccatgcgtgg tcctcagtgc tgcacgcgcg gcaggccgag accgaactgc
      481 gcgatcagtt cgcgctggat ttcgttggcc ccgccgccaa aggtgttgat cgtgttggcg
      541 cggatctcgt attccagctc gcccgccagg aacgccgcgc tggagtccac gcgcaccagc
      601 gcgccggcgc cgacgatctc ctgcagccgg cgcaggatct ccagcacgct ctcggtgccg
      661 tagaccttgg tgatcgaggc gagcgcgacg tccacctcgc ccgcctcgag cccggcggcg
      721 atgcggaagt tggtgatgcg catcgcctcc aggcgctggt agcactccgc gaacgcgcgg
      781 cgcacccacg gcgcgtcgat cgcgcggcgg ccgtcctcgt ccggcgcctt ggcccaggcc
      841 agcacgcggc tgaacgggcc gaacaccttg tccgaccacg cacccagccc gagccgctcg
      901 tggttgagct gcgcggtgat gagcttccag ccgccgtgca gcgcgcccac cagctggtcg
      961 gccggcacct cgacgttgtc gtagtacgtg gccgcggtga ggttgcccac ggtggcgatc
     1021 ggcgtggtgg aaaacccgcg cgcgtgggtg tcgacgatca ggatcgagat gcccttgtgg
     1081 cgcggcagct cggtgctggt gcgcgcggcc agccagatga aatccgcgct ctccgcgccg
     1141 gaggtccaca gcttggagcc gttcaccgtg aagtgcccgg tttcgaggtc accgacgagc
     1201 tgcgcctggg tcttcagcgc ggcgaggttg gaacccgcgg ccggctcgga gtagccgatc
     1261 gcgaacacga tctcgccggc ggcgatgccg ggcaggaagc gcgccttctg cgcggcgctg
     1321 ccgtgcagca tcaatgccgg gccgacggtg ctgatggtga cgaacggcag cggcgcgccg
     1381 gcgatattcg cctcctcgaa aaagatcagc tgctcggtgg cggcatagcc ctgcccgccg
     1441 tattcctttg gccagccgac cgcgagccag ccgtcctggc ccatctggcg caccacgcgg
     1501 cggaacgtgt cgccgccctc ggcgccgcgc aggctcgcgc gcagatccgg cgtcatcagc
     1561 gcgttgaagt aatcgcgcac gcggcggcgc agcgcgtgct gctcgggggt gaggtcaacg
     1621 aacatgcgcg gtcctcatgc cgtgcccagg atcaggccgc tggtcggcac gccggtgccg
     1681 gcggtgacca gcacgtgctc gacgttggcc acctggttca ccgcgctgcc gcgcacctgg
     1741 cgcacgccct cggcgacgcc gttcatgccg tggatgtagg cctcgccgag ctggccgccg
     1801 tgcgggttga tcggtagctt gccgccgcgc gcatggtgcc cggcgcggat gaaatccttc
     1861 gcctcgccgc gcccggcgaa accgaactcc tccagctgca gcagcacgaa cggggtgaag
     1921 tggtcgtaga tcaccgcggt ctggatgtcg gccggggtga gcccgctctg cgcccacagc
     1981 tggttggcga ccaggcccat ctccggcagg ccggtgatgt cgtcgcggta gaacgaggtc
     2041 atgatctgct ggccctcgtg gatgccctgc gccgcggcct tcaccaccac cggcttctgg
     2101 cgcaggtcgc gcgcgcggtc gagcgaggtg atgaccatcg ccaccgcgcc gtcgctttcc
     2161 tggcagcagt cgagcaggtg cagcggctcg cagatccact tgctgtgctg gtggtcggcg
     2221 agcgtgatcg gcttctggta gaagaacgcg gctgggttgg tggcggcgaa atcgcgcacc
     2281 gcgacggcga cgcggccgaa gtcctcgctg gtcgcgccat agcggtacat gtagcgctgc
     2341 gcggccatcg ccacccacga cgccggggtg tgcaggcccg agggcatgta ccagccgtag
     2401 ttgacgttct ccaccgtggg cgtggcggcg aagccgtagc tgccgctgcc gaagcggtac
     2461 cagctgcgct cgttcatcgc gcggtacacc accacggtct tggcgacgcc ggtggccacc
     2521 gccatcgccg cgtgcagcac cggcgcgcag gcggcgccgc cgccgtgcgg gatctgcgag
     2581 aagaaggtga cgttcctggc gccgagcagg cgcgcgatct cgtactcggg caccttgtcg
     2641 atggtgtacg agcagaagcc gtccacgtcg gccgggtcga tgccggcgtc ggcaagcgcg
     2701 gcgagcgtcg cttccatcgc caggcggatc tcggtgcgcc cggagttctt gctgaattcg
     2761 gtggcgccga ggccgacgat cgcggcgcgg tcggcaatgc cgtgattggt catggcagct
     2821 tcaccctcac ggttccggtg acgtgcgggc ccatcgaatt ggcgcccttg agcgtgactt
     2881 ccacgctgtg gccggcctca tcacggccgg tgaccgcgcc gctgaaggtc agcgtgtcgc
     2941 cggggtagtt cggcgcaccg agcttgatct tcaccgaagc cagccggcac gccggcccgg
     3001 cccagccctc gacgaaacgc tcgaccaggc cgttggtggt gaggatgttc atgaagatgt
     3061 gcggcgagcc cagcgcacgt gcggcctcgg catcgtggtg gccggggaaa taatcgcggg
     3121 tggcgatcgc gccgccggcg atcagcggca cgg
//
LOCUS       DASSVL010000193         2254 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_654486, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000193 DASSVL010000000
VERSION     DASSVL010000193.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2254)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2254)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2254
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_654486"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..416)
                     /locus_tag="VFM52_03315"
     CDS             complement(<1..416)
                     /locus_tag="VFM52_03315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008436227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyl transferase family 4"
                     /protein_id="HET8764228.1"
                     /translation="MYTTIGWLLASLSITLLLVRGAIGYAQRRGMLDQPGQRRSHRLP
                     TPRGGGIGLVVAMLACLPGVLWHAPAAWPTSVIASLLAALALVALAGWWDDHRSLPIL
                     PRLGVQLLAVGLFSLSLLSTGLSAWWMPLLLIAGAW"
     gene            complement(452..1624)
                     /gene="lapB"
                     /locus_tag="VFM52_03320"
     CDS             complement(452..1624)
                     /gene="lapB"
                     /locus_tag="VFM52_03320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007508282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide assembly protein LapB"
                     /protein_id="HET8764229.1"
                     /translation="MNPLYVLAALLPVAFVLGWWASRLVVARRAGVDVSTLSSDYFRG
                     LNYLLNEEQDKAIEVFLKLAEYNRDTVETHLALGNLFRRRGEVDRAIRLHQHLVSRPG
                     LSDAMKTVALLELGEDYMRSGLLDRAEALFADLVAMNSHAPSALRHLISIYQHERDWH
                     KAIEHARRLEVMTGDDEAPMIAQFYCELAERARQHGARAEAREYLRQAFECQPDCVRA
                     FMLTGRLLSEDGQHAEAVAAYEAAIKADIAFTPDILPPLLNSYARSQQMERAERFLHD
                     KLARYHGVSPVLALTHLYRQRDGERAAIDFLTSQLRQRPSVRGLMALIDATMDKIEGE
                     ARENFLILRDLTRKLLEGQAMYRCSRCGFGAKAHHWQCPSCKSWSTIRPIHGVASE"
     gene            complement(1621..1869)
                     /locus_tag="VFM52_03325"
     CDS             complement(1621..1869)
                     /locus_tag="VFM52_03325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015447681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LapA family protein"
                     /protein_id="HET8764230.1"
                     /translation="MRLLALIILAIFVAAGIVLGALNAEMVAYDFGFAQVQLPKGAAL
                     LGALVVGWLLGGVTAWLGVRPRRSRRTTGADRKPPAKP"
     gene            complement(1991..>2254)
                     /locus_tag="VFM52_03330"
     CDS             complement(1991..>2254)
                     /locus_tag="VFM52_03330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017460805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005694 - chromosome [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="integration host factor subunit beta"
                     /protein_id="HET8764231.1"
                     /translation="RQTHLAFADVEMAVKSVIEQMSLALAQGERIEVRGFGSFALHYR
                     PPRMGRNPKTGEAVALPGKHVPHFKPGKELRERVNLDLENSAG"
BASE COUNT          388 a          782 c          750 g          334 t
ORIGIN      
        1 ctccaggcgc cggcgatcag cagcagcggc atccaccacg ccgacaagcc ggtgctcaac
       61 aggctcaacg aaaacaggcc taccgccagc agctggacgc ccagccgcgg caggatcggc
      121 agcgagcggt ggtcgtccca ccagccggcc agcgccacca gcgccagcgc ggcgagcagg
      181 ctggcgatca cgcttgtcgg ccaggccgcc ggcgcatgcc acaacacacc cggcaggcac
      241 gccagcatcg ccacgacgag gccgatgccg ccgccgcgcg gagtgggcag gcgatgcgaa
      301 cggcgttgcc cgggctggtc cagcatgccg cgccgctgcg catagccgat cgcgccgcgc
      361 accagcaaca gggtgatcga caagctggcc agcaaccatc cgatggtcgt gtacatgctc
      421 acttgacggg gctcacttca cggggctcgg ttcactcgct ggcgacgccg tggatcggcc
      481 ggatcgtgct ccagctcttg cagctcgggc actgccagtg atgcgccttg gcgccgaaac
      541 cgcagcggct gcagcggtac atcgcctggc cctccagcag cttgcgggtc agatcgcgca
      601 ggatcaggaa attctcgcgc gcctcgcctt cgatcttgtc catggtggcg tcgatcaggg
      661 ccatcagtcc gcgcaccgac ggccgctggc gcaattgcga ggtcaggaag tcgatcgccg
      721 cccgctcgcc gtcgcgctgg cggtacaggt gggtcagcgc cagcaccggc gagacgccgt
      781 ggtagcgcgc gagcttgtca tgcaggaaac gttcggcgcg ctccatctgc tgcgagcggg
      841 cgtagctgtt gagcagcggc gggaggatgt ccggggtgaa ggcgatatcg gccttgatcg
      901 ccgcctcgta ggccgcgacc gcctcggcgt gctggccatc ttcggacagc aggcggccgg
      961 tcagcatgaa ggcgcgcacg caatcgggct ggcattcgaa cgcctggcgc aggtattccc
     1021 gcgcctcggc acgggcgcca tgctgacgcg cgcgctcggc gagctcacag tagaactggg
     1081 cgatcatcgg cgcctcgtcg tcgccggtca tcacctccag ccgccgcgcg tgctcgatcg
     1141 ccttgtgcca gtcgcgctcg tgctggtaga tcgagatcag atggcgcagc gccgagggcg
     1201 cgtgcgagtt catcgccacc aggtcggcga acaaggcctc ggcacgatcg agcaggcccg
     1261 agcgcatgta gtcctcgccg agctccagca gggccacggt cttcattgcg tcggacaggc
     1321 ccggtcgcga gaccaggtgc tggtgcagcc ggatcgcccg atccacctcg ccgcgacggc
     1381 gaaacaggtt gcccagggcg aggtgcgtct ccaccgtgtc gcggttgtat tcggcgagtt
     1441 tcaggaagac ttcgatggcc ttgtcctgct cctcgttgag caggtagttc aggccgcgga
     1501 aataatccga cgacaaggtg ctgacgtcga cgccagcccg ccgcgcaacc accaggcgcg
     1561 aagcccacca acccagcacg aaggcgacag ggagcagtgc ggccagcaca tacaggggat
     1621 tcatggcttg gccggcggct tcctgtccgc gcccgtagtg cgtcgcgaac gccgtggccg
     1681 cacaccgagc cacgcggtca ccccgcccag caaccagccc accaccaggg cgcccagcag
     1741 cgcggccccc ttgggcaact gcacctgggc aaagccgaag tcgtaagcga ccatttccgc
     1801 attcaacgcg cccagcacga tgccggcggc gacgaaaatg gccagaatga tgagggcaag
     1861 caatcgcatg ctcgaacttt acccgattgg cgcagtcggg cacaggcgct gccgccgcca
     1921 gccgtcctgc aggcaaaaag aaggcaggac cggctcgcgc cgcctgcctc gcattctccg
     1981 gtcgatggac tcaaccggca ctgttctcca ggtcaagatt gacgcgctcg cgcaattcct
     2041 tgcccggctt gaaatgggga acgtgcttgc ctggcagggc cacggcttcg ccggtcttgg
     2101 ggttgcgccc catccgcggc ggccggtagt gcaacgcaaa gctgccgaag ccgcgcacct
     2161 cgatgcgttc gccctgggcc agcgccaggc tcatctgttc gatgacgctc ttgacggcca
     2221 tctcgacgtc ggcgaacgcg aggtgggtct ggcg
//
LOCUS       DASSVL010000194         2054 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_993273, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000194 DASSVL010000000
VERSION     DASSVL010000194.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2054)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2054)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2054
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_993273"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(79..1479)
                     /locus_tag="VFM52_03335"
                     /pseudo
     CDS             complement(79..1479)
                     /locus_tag="VFM52_03335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008209653.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="NERD domain-containing protein/DEAD/DEAH box
                     helicase"
     gene            1857..>2054
                     /locus_tag="VFM52_03340"
     CDS             1857..>2054
                     /locus_tag="VFM52_03340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007079855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase"
                     /protein_id="HET8764232.1"
                     /translation="MFQPVTDDLRIREITPLATPLEVLAECPATPAALATVGATRTAL
                     HHIIDGSDDRLAVVIGPCSIHD"
BASE COUNT          310 a          712 c          668 g          364 t
ORIGIN      
        1 gcatcttgcg gcaccacttg tggaagttgt agacctgtac tttttcactc agaccgcgtt
       61 cgccgatcag ctgttccacc cgcgccgccc cgcgctttcc ggtgcgacga gcggcacgcc
      121 gtcatcgtcg tccgcgcgcg gcgccagcag ctcgctggcg aacgcgcgcg ccacggccag
      181 ggtttccagc gtgttgcggt agttgagctt caagatggtg gtgcgcccct gcgcctgcac
      241 gccgaggctt ttccagctga tcctgcgccg gttcggcttg ccgtagatgt tctgcgcgtc
      301 gtcgtacagc accaagagcg aattggtggc cgggtcgatc atctgcacga tcagcttgta
      361 ccagtccggg tcgaagtcgt ggccttcgtc gaccagcacc gcgccgtact ggaagcgcgg
      421 gatctgcccc ttgtccacgc cggcgatcac gcgctcgacc atcgcctcga agaaatgctc
      481 gcccttgggc ggcagctcga cgtgatagct ggtgagcatg cgccggcacc agcggtggaa
      541 gttgtagacc tgcaccttgt cggccaagcc gcgctcgccg agcagttgtt cgagccgcgc
      601 cgccagcacc ttgttgtagc agagcaccag gatcggccgg ctcgtcgcgc gcgcgagctg
      661 catcgcgcgg aagccgagga tcatcgtctt gcccgagccg gcgacgccgt ggatgacgcg
      721 gtgctcggcg ccgagcgaac gcgcgagctg ctcctgctgg gcgtccatca cctgcaccag
      781 gtcgggcacc tccagcgtat gcacgtcgtg gtcggccgtg gcgaacaggc cgaactgccc
      841 gctgcccggt tcgagccgga tctcggggaa caggtgccag cgcacgcggt cgagctgcgg
      901 cagcgtcagc gccaccgggt acacctgtgg aaacatcgcc cacaggcgct cctggaaggc
      961 ctcggcgtcg acgttctcga acatctcgtc gcggcagatc gcgaggtgcg gcgggatcac
     1021 cgcggccagc ccgccgtcga caaactgctt gcgcgtgatg ttcgccagca ccgtgccgta
     1081 cgcccacggc atcagcagct tgccggcgtg gcggtggccg ggcggatggc gcagcgccgg
     1141 gtcgcgttcc agcaccacgc cgacttccag cgcgtatgcg cgcgcctgca gcagcggatt
     1201 cacctctttc accagcccgc ggtcggtgac cagggtgaac tgggtcttgt ccgcctggcg
     1261 gatggtctcc gccttccagt ccttcacctc cagcaccagc aggccgcgac gcggatgcac
     1321 cacgacgaaa tccggccggc gctgcttgag cccgatcggc acgtcgtacc acagcaggta
     1381 gtcgtcctcg agtttctgtt cgagccgctc ggagacccgc ttctcgccac tggtcatgcg
     1441 cggcaggcag ctgttgcggg tcgggatcag ggtcgccatc gcgtcattcc gtggatgccc
     1501 tccggaaatt agccgatcgg ccccggctgt caacggtgcg gaggcaccga tggggagggc
     1561 cgggtggcag ccccgttcgg ccgcgcccgg cagggcgctg cgccggtcga tcccgcagtg
     1621 gatacgcgcg acaggcgaat cgatcatttg cgccggcggg aacttggtgc tatttctgct
     1681 cgggatgaat cactccgccc gccagtactt ttggttttat ggctactcgc taccgctggc
     1741 ggaggcgtgg gtgtgatctt gtcgcaagtc tgaaacccca tcctgaaaag ccgccagcac
     1801 caaggcggct tttttcatgg ccgccgctgg cacatccatc gaggagagct gctgccatgt
     1861 tccaacccgt caccgacgat ctgcgcatcc gcgagatcac gccgctcgcc acgccactcg
     1921 aggtgctggc cgaatgcccg gccacgcctg ctgcgctggc cacggtcggc gccacgcgca
     1981 ccgcgttgca ccacatcatc gacggcagcg acgaccgcct cgccgtggtg atcggcccgt
     2041 gctcgatcca cgac
//
LOCUS       DASSVL010000195         2286 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1303873,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000195 DASSVL010000000
VERSION     DASSVL010000195.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2286)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2286)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2286
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1303873"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..280)
                     /locus_tag="VFM52_03345"
     CDS             complement(<1..280)
                     /locus_tag="VFM52_03345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008215550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RES domain-containing protein"
                     /protein_id="HET8764233.1"
                     /translation="MPATLPPVRLVRWNHAYRIVPSRFPPAGLFDRIADPADLDAVFA
                     IEALTNPRLREEAGALALVPAAHRVSGPGSTPVMAAFTHLNPEGSRFSD"
     gene            complement(346..759)
                     /locus_tag="VFM52_03350"
     CDS             complement(346..759)
                     /locus_tag="VFM52_03350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015446362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MbcA/ParS/Xre antitoxin family protein"
                     /protein_id="HET8764234.1"
                     /translation="MNTRSQRIADTAASYAPPSEALGAPALRSFFRLAEHWDLRVAEQ
                     RKLLGDPPESTFYKWKRERDGALSRDTLERISYLLGIWKSLQILFPDPAQADAWLRKP
                     NAATPFGSQPALARMLSGNVADLYVVRQYLDAQRG"
     gene            complement(855..>2286)
                     /locus_tag="VFM52_03355"
     CDS             complement(855..>2286)
                     /locus_tag="VFM52_03355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017461633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF885 family protein"
                     /protein_id="HET8764235.1"
                     /translation="YEMPFNADSAFWSNLDFMARADLRDAAAYRAYAARLRDVPRYFD
                     QQIANMKLGLARGFSVPRAVLAGRDKSIAAVAQLADPTTSSFYAPFQHLPATIPADQA
                     QALRGEAMQKIRDQVIPAYAKLLKFFDDEYVPHARTTLAAEALPDGKAYYRQQIRAYT
                     TLDLTPDQIHQIGLEQVAKIHAQMLGVMRQTGFKGSFPEFLQFLRSDPRFYAKTPQEL
                     LDRTAWVAKEVDGQMARFFGHLPRARFTIKPVPAAIAPYYTSGRGGADVYLVNTYDLK
                     SRALYNMPALTLHESYPGHSLQLELAREQHGFPAFRRNGYISAYGEGWGLYSEYLGNE
                     MGIYQTPYQQFGYLTYQMWRACRLVVDTGIHHLGWSRQQAIDYLTDNTALSPLEIANE
                     VDRYISWPGQADSYELGYLKIRELRAKAETALGEKFDLRAFHDTVLSTGSVPLPVLAA
                     RIDRFIADGGPEPDAACGCRPGDAPR"
BASE COUNT          340 a          705 c          847 g          394 t
ORIGIN      
        1 cgtcggaaaa ccggctgcct tccgggttca ggtgcgtaaa ggcggccatc accggcgtcg
       61 agccggggcc gctgacccgg tgtgccgccg gtaccagtgc cagtgcgccg gcttcctcgc
      121 gcaggcgcgg gttggtcagc gcctcgatgg cgaacacggc atcgagatcg gctggatcgg
      181 cgatgcggtc gaacaacccc gctggcggaa accggctggg cacgatgcgg taggcatggt
      241 tccagcgcac gaggcgaacg ggcggcaggg tggcgggcat ggaggcgatc cggggcaggg
      301 tgccgccagc gtgcgggtgc ggcgtcgcgc tggctgcgac gcggctcagc cgcgctgcgc
      361 gtcgaggtac tgccgcacca cgtagaggtc ggccacgttg ccgctcagca tgcgcgccag
      421 cgccggctgg ctgccgaacg gcgtggcggc atttggcttg cgcagccagg cgtcggcctg
      481 cgccgggtcg ggaaacagga tctgcagcga tttccagatg ccgagcaggt agctgatgcg
      541 ctccagcgtg tcgcgcgaaa gcgcgccgtc gcgctcgcgc ttccacttgt agaacgtgga
      601 ctccggtgga tcgccgagga gcttgcgctg ctcggcgaca cgcaggtccc aatgctcggc
      661 cagccggaaa aagctgcgca gggccggtgc gccgagcgct tcgctgggcg gcgcgtatga
      721 cgcggcggtg tcggcgatgc gctggctgcg ggtgttcatg ggttgactct cactatgaac
      781 ccgcaagcaa acctactaca tgtatgaacc ttctgccagt gcccgcgcgg ggctggcgtg
      841 gttcgtggca atggtcatcg tggcgcgtcg ccaggacggc acccgcaggc ggcatccggt
      901 tcggggccac catcggcaat gaagcggtcg atgcgtgccg ccagcaccgg cagcggcacc
      961 gagccggtgg agagcacggt gtcgtggaag gcgcgcaggt cgaatttttc gccgagcgcg
     1021 gtttccgcct tcgcgcgcag ctcgcggatt ttcaggtaac ccaactcgta gctgtcggcc
     1081 tggcccggcc agctgatgta gcggtcgacc tcgttggcga tttccagcgg actgagcgcg
     1141 gtgttgtcgg tgaggtagtc gatcgcctgc tggcgactcc agccgaggtg gtggatgccg
     1201 gtgtcgacga cgaggcggca cgcgcgccac atctggtagg tgagatagcc gaactgctgg
     1261 tacggcgtct ggtagatgcc catctcgttg ccgaggtatt cggagtacag cccccagcct
     1321 tcgccgtagg cggagatgta gccgttgcgg cggaacgcgg gaaagccgtg ctgctccctg
     1381 gccagttcca gctgcagcga gtggccggga tagctttcgt gcagggtcag cgcaggcatg
     1441 ttgtacagcg cgcgcgattt caggtcgtag gtgttgacca ggtacacgtc cgcgccgccg
     1501 cggcccgagg tgtagtacgg cgcgatcgcg gccggaaccg gcttgatggt gaagcgtgca
     1561 cgcggcaggt ggccgaagaa tctggccatc tggccgtcca cttccttggc gacccaggcg
     1621 gtccggtcca gcagctcctg cggcgtcttc gcgtagaacc gcgggtcgct gcgcaggaat
     1681 tgcaggaact cggggaagct gcccttgaag ccggtctgcc gcatcacgcc aagcatctgc
     1741 gcgtggatct tcgccacctg ctccaggccg atctggtgaa tctggtcggg cgtcaggtcc
     1801 agcgtggtgt atgcgcggat ctgctggcgg tagtacgcct tgccgtcggg cagcgcctcg
     1861 gcggccagcg tggtgcgcgc gtgcggcacg tactcgtcgt cgaagaactt gagcagcttc
     1921 gcgtaggcgg gaatcacctg gtcgcgaatc ttctgcattg cttcgccgcg cagggcctgc
     1981 gcctggtcgg ccgggatcgt ggccggcagg tgctggaatg gcgcatagaa gctcgatgtc
     2041 gtcgggtcgg cgagttgcgc caccgccgca atcgacttgt cgcgcccggc gagcaccgcg
     2101 cgcggcacgc tgaagccgcg cgccagcccg agtttcatgt tggcgatctg ctggtcgaaa
     2161 tagcgcggca cgtcgcgcag gcgcgccgcg taggcgcggt aggcggcggc atcgcgcagg
     2221 tcggcgcggg ccatgaagtc caggttcgac cagaacgcgc tgtccgcgtt gaacggcatt
     2281 tcgtag
//
LOCUS       DASSVL010000196         3785 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1134673,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000196 DASSVL010000000
VERSION     DASSVL010000196.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3785)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3785)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3785
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1134673"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..711
                     /locus_tag="VFM52_03360"
     CDS             <1..711
                     /locus_tag="VFM52_03360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003468828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OB-fold nucleic acid binding domain-containing
                     protein"
                     /protein_id="HET8764236.1"
                     /translation="GHALRMGLRMVRGFGADDARRIEQARTVCPFADVADLCERAALD
                     ARSRERLADAGTLRGLAGHRHRVRWAVAGVEAARPLLDAATQPRESRVVLPLPSLGED
                     LQADYATLGTTLQRHPLALLRAQLRARHCRSSKELAGIPSGRNLAAAGLVVGRQRPGT
                     AGGVTFVTLEDEHGMINVVVWRQLAERQRHALLASRLLMVEGRLEVESDVRHLIARRL
                     HDLTPLLSNLAVRSRDFK"
     gene            1050..3446
                     /locus_tag="VFM52_03365"
     CDS             1050..3446
                     /locus_tag="VFM52_03365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015447935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoketolase family protein"
                     /protein_id="HET8764237.1"
                     /translation="MKTGLRRDAIDPQDLQGVDAWWRAANYLSVGQIYLRANPLLREP
                     LRLEHVKHTLVGHWGTTPGQNFIYAHLNRVIRRHGLDMIYLSGPGHGGPAVVANAYLD
                     GTYSELYPEITQDEAGLQRLFKQFSFPGGIASHASPECPGSIHEGGELGYSLSHAFGA
                     VFDNPELIAACVIGDGEAETGALATAWHGNKFLDPASDGAVLPILHLNGYKIANPTVL
                     ARIPRRELSQFLRGCGWKPYFVRGHHPATMHRTMAATLDAVCADIRQIRHQARAGRAG
                     SRPAWPMIVLESPKGWTGPGSVDGKPVEGTFRAHQVPLPVSAAAPQHLAVLEAWMRSY
                     RPQELFDAHGRLRIELRALAPDGERRMSANPHANGGLLLRDLRMPDFRRHAVALAGPG
                     ATGIGDTRVLGGFLREVVRANRDQRNFRIFGPDETISNGLGAVFEATNRQWEAATRPT
                     DEFLARDGRVLEMLSEHQCQGWLEGYLLTGRHGVFNCYEAFIHIVDSMFNQHAKWLKM
                     TAGIPWRRPIASLNYLLASHVWRQDHNGFTHQDPGFIDHVVNKKAEVVRVYLPPDANC
                     LLSVMDHCLRSRHYVNVVVAGKHPAPQWLDIDAAAAHCARGIDIWPWAGSDRNGEPDV
                     VMACAGDVPTLETLAAVSILRHYLPDLKVRVVNVVDLMKLQPDSVHPHGLGDDDFDRL
                     FTLDRPVIFAYHGYPTLIHRLTYRRRNHDNFHVHGYKEEGTITTPFDMTVLNGLDRFH
                     LALDVIGRVPGLAAKTISLKQKLEDKLAEHWCYIRAEGVDLPEVREWSWSAADAGVLR
                     "
     gene            complement(3460..>3785)
                     /locus_tag="VFM52_03370"
     CDS             complement(3460..>3785)
                     /locus_tag="VFM52_03370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8764238.1"
                     /translation="PLRGKDHAHVIVASNGHRTLRSSGYALNILHAWGRKPDDASAPA
                     RPSWRAQIAMRAALQPWMDEPIAYPLLATDDLDDAQRLEARKLAAFHGLGEPVWRDEA
                     ALQPP"
BASE COUNT          600 a         1306 c         1303 g          576 t
ORIGIN      
        1 ggacacgcgc tgcgcatggg cctgcgcatg gtgcgcggat tcggcgcgga cgacgcacgg
       61 cgcatcgagc aggcgaggac agtgtgtccg ttcgccgacg tggccgacct gtgcgaacgg
      121 gcggcgctcg atgcccgttc gcgcgagcgc ctggccgatg ccggcacgct gcgtggcctg
      181 gctggccacc ggcatcgggt gcgctgggcc gtggccgggg tggaggccgc gcggccgctg
      241 ctcgacgccg ccacgcagcc gcgcgagtcg cgggtcgtcc tgccgctgcc cagcctcggc
      301 gaggatctcc aagccgacta cgccacgctc ggcaccacgc tgcagcgcca cccgctggcc
      361 ctgctgcgcg cgcaactgcg ggcgcggcac tgccgcagtt cgaaggagct ggcgggcatc
      421 ccctccgggc gcaacctcgc cgcggccggc ctggtcgtcg gccgccagcg ccccgggact
      481 gccggtggcg tcaccttcgt cacgctggaa gacgaacacg gcatgatcaa cgtggtggtc
      541 tggcgccagc tggcggagcg gcaacgccac gccctgctgg catcgcggct gctgatggtg
      601 gaaggcaggc tggaagtcga gagcgacgtg cgccacctga tcgcccgccg cctgcacgac
      661 ctgacgccac tgctgagcaa cctggcggtg cggagccgcg acttcaaatg accgcggttg
      721 cgcgtggccg gctggaggaa atcccggata cccgctcgaa tcgcgacggg attcccgcgg
      781 cggttccgtg ccgcgcgaaa ccggtggcgt cgcgtctgcg ccggcgttga tgaagatcaa
      841 ctgggtggcg gcggccacat gctgacatcg gtccaccgcc ggccagtcgg gcgggaaaag
      901 gtgtgccgtg gatatccggg aaaccatgcg tgcggccacc gtccgggctt tcgggcggcc
      961 gtggtcgact ggcgggatgg cggttcccgg acccgtcccc ggcgaggcgc cacgcggcat
     1021 cccggcaatt tctcgaagcg agccatggca tgaaaaccgg actccgtcgt gacgcgatcg
     1081 atccgcagga cctgcaaggc gtcgatgcct ggtggcgcgc ggccaactac ctctcggtcg
     1141 gccagatcta cctgcgggcc aatcccctgt tgcgcgagcc gctgaggctg gagcacgtca
     1201 agcacacgct ggtcggccac tgggggacga cgcccgggca gaacttcatc tacgcgcacc
     1261 tcaaccgggt gatccggcgg catggcctcg acatgatcta tctctctggc ccgggacatg
     1321 gcgggccggc ggtggtcgcc aacgcgtacc tggacggcac ctacagcgag ttgtatccgg
     1381 agatcaccca ggacgaggcc ggcctgcagc gcctgttcaa gcagttctcg tttcccggcg
     1441 gcatcgccag ccatgcgtcg cccgaatgtc ccgggtcgat ccacgagggc ggcgaactcg
     1501 gctattcgtt gagccatgcc ttcggcgcgg tgttcgacaa ccccgagctg atcgccgcct
     1561 gcgtgatcgg cgacggcgag gccgagaccg gcgcgctggc cacggcctgg catggcaaca
     1621 agttcctgga ccccgccagc gatggcgcgg tgctgccgat cctgcacctc aacggctaca
     1681 agatcgccaa tcccaccgtg ctggcgcgca ttccgcgccg cgaactgtca cagtttctgc
     1741 gcggctgcgg atggaaaccg tatttcgtgc gcggccacca tccagcgacc atgcaccgca
     1801 cgatggcggc aacgctcgat gcggtgtgcg ccgacatccg gcagatccgg caccaggcgc
     1861 gcgcgggccg agccggctcc cggccggcgt ggcccatgat cgtgctcgaa tcgccgaagg
     1921 gatggacagg gcccggcagc gtcgacggca agccggtcga gggtacgttc cgcgcgcacc
     1981 aggtgccgtt gccggtatcc gccgccgccc cgcagcacct cgcggtcctg gaggcctgga
     2041 tgcggagcta ccggccgcag gagctgttcg atgcccacgg ccggctgcgg atcgagctgc
     2101 gcgcgctcgc accggacggg gagcgacgca tgagcgccaa cccgcatgcc aacggcggcc
     2161 tgctgctgcg cgacctgcgc atgcccgatt tccgcaggca cgccgtggcc ctggccgggc
     2221 caggcgcgac cggcatcggc gacacccgcg tgctcggcgg cttcctgcgc gaggtggtcc
     2281 gcgccaaccg cgaccagcgc aatttccgga tcttcggccc cgacgaaacg atctcgaacg
     2341 gcctgggggc ggtgttcgaa gcgacgaatc gccaatggga ggccgcgacc cggccgaccg
     2401 acgaattcct cgctcgcgac ggccgcgtgc tggagatgct gagcgaacac cagtgccagg
     2461 gctggctgga gggctacctg ctgactggcc gccatggcgt gttcaactgc tacgaggcgt
     2521 tcatccacat cgtggattcg atgttcaacc agcacgccaa gtggctgaag atgaccgcgg
     2581 ggattccgtg gcggcgcccg atcgcctcgc tcaactacct gctcgcctcg cacgtgtggc
     2641 ggcaggacca caacgggttc acccaccagg accccggctt catcgaccac gtggtcaaca
     2701 agaaggcgga ggtcgtgcgg gtctacctgc cgccggacgc caactgcctg ctctcggtga
     2761 tggaccactg cctgcgcagc cgccactacg tcaacgtggt ggtggccggc aagcatcccg
     2821 cgccgcagtg gctggacatc gatgccgccg ctgcgcactg tgcgcgcggg atcgacatct
     2881 ggccgtgggc cggcagcgac cggaacggcg aaccggatgt ggtcatggcc tgcgcgggcg
     2941 atgtgcccac gctggaaacc ctggcagccg tttcgatcct tcgccactac ctgccggacc
     3001 tgaaggtgcg cgtggtcaac gtggtggacc tgatgaagct gcaaccggac agcgtgcatc
     3061 cgcacggcct gggcgacgac gacttcgatc gcctgttcac gctggatcgt cccgtgatat
     3121 tcgcgtacca cggttatcca accctcatcc accgcctgac ctaccggcgc cgcaaccacg
     3181 acaatttcca cgtgcacggc tacaaggagg agggcacgat caccacgccg ttcgacatga
     3241 cggtgttgaa cggccttgat cgcttccacc tcgcgctgga cgtgatcggg cgcgtgccgg
     3301 gactggctgc gaaaacgatt agcctgaagc agaagctcga ggacaagctc gccgagcatt
     3361 ggtgctacat ccgcgcggaa ggcgtggacc tccccgaagt acgcgagtgg tcgtggtcgg
     3421 cggcggatgc cggcgtgctc cgttgagcac gcgggtcgat cacggtggct gcagcgcggc
     3481 ctcgtcacgc cagaccggct ctcccaaacc atggaacgcg gcgagttttc gcgcttcaag
     3541 ccgttgcgcg tcatccaggt catccgtcgc cagcaacggg taggcgatgg gctcgtccat
     3601 ccatggctgg agggcggcgc gcatggcgat ctgcgccctc catgacggac gcgccggcgc
     3661 ggaggcatcg tcaggtttgc gtccccacgc gtgcaggatg ttcagcgcgt acccggagga
     3721 acgcagggtg cgatgcccat tcgaagcgac gatcacgtgc gcatgatcct tcccgcgcag
     3781 cggat
//
LOCUS       DASSVL010000197         2012 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_484838, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000197 DASSVL010000000
VERSION     DASSVL010000197.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2012)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2012)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2012
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_484838"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..382)
                     /locus_tag="VFM52_03375"
     CDS             complement(<1..382)
                     /locus_tag="VFM52_03375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8764239.1"
                     /translation="MEESRAVTGRCAGHRLHHWLASVTLCLAAAYASAATGPPPAADG
                     GLPLVSNFTPSEYGGAAQNWAVAQDRDGIIYVGNVESGVLVFDGARWSAIPVPNHATV
                     RSLALGADGRIYVGTVGDLGYLKRE"
     gene            604..1668
                     /locus_tag="VFM52_03380"
     CDS             604..1668
                     /locus_tag="VFM52_03380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007806424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005384 - manganese ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0030026 - intracellular manganese ion
                     homeostasis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="VIT1/CCC1 transporter family protein"
                     /protein_id="HET8764240.1"
                     /translation="MGDPRTRRIRINLRIERANAELYARLATLAGDEQQARVYRRIAA
                     GEEANAAFWEARLRALGATVPPRRTGLRVRVLGWFARRFGTEFVMPTVVRRAHADYLA
                     TPVDRSGHRDHFALPGLLGGAGRRHRAQSGNTLRAAVLGANDGLVSNVSLVMGMAGAA
                     TGDRAVLLAGLAGLVAGACSMALGEWLSVNSSREFYQAQITERAERLAAVPEAGLANI
                     ADIYRDKGLDPAAAEHLAGHVTASPRATLDMLVREELGVDPAELGGSAWSAAISSFFL
                     FACGALFPVAPYFFTGGNTALAASAVTTAAGLSLIGVGTALFTGRGVLFSIARQFGIT
                     LGAAAVTYGVGHLLGVALAG"
     gene            1719..>2012
                     /locus_tag="VFM52_03385"
     CDS             1719..>2012
                     /locus_tag="VFM52_03385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007079929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HET8764241.1"
                     /translation="MSAVVELTRELIARRSVTPEDAGCQALLAERLARAGFRIEHHRF
                     GAVDNLWTVHGERGPTLVFLGHTDVVPSGPEAAWHSPPFTPSVRDGRLYGRGAA"
BASE COUNT          266 a          702 c          725 g          319 t
ORIGIN      
        1 cctcgcgctt caggtatccg aggtcgccca cggtgccgac gtagatgcgt ccatcggcgc
       61 cgagtgccag cgagcgcacg gtggcgtggt tcggtaccgg gatggcgctc cagcgcgcgc
      121 cgtcgaacac cagcacgccg ctttcgacgt tgccgacgta gatgatgccg tcgcgatcct
      181 gggcaacggc ccagttttgc gccgcgccgc cgtactcgga cggcgtgaag ttgcttacca
      241 ggggcaggcc gccatcggcg gcaggcggtg gcccggtggc cgccgacgcg tacgccgcag
      301 ccaggcacaa agtgacgctg gcgagccagt ggtgcaggcg gtgtccggcg caacggccgg
      361 taacagctcg cgattcctcc atggcgtcct cgacagcagc ggcaagccga cgtggccggc
      421 ctcacggatt ggcaagcaaa cggcctgcca acctgtgatc ggccagtacc ggcaaagctt
      481 gagtggttgc catcatcgcc gttccggagt cgcttgccag cctgcgccgc cccgcaggag
      541 gcgcggcgca tcgtaagctc gccggcacgg caacccgccg tcgccaccga ccgaaccacc
      601 accatgggcg atccccgcac ccgacgtatc cgcatcaatc tgcgcatcga gcgcgccaat
      661 gccgagcttt acgcgcgcct ggccacactg gccggcgacg agcagcaggc gcgggtgtat
      721 cggcgcatcg ccgcaggcga ggaagccaat gccgcgttct gggaggctcg cctgcgtgcg
      781 ctgggggcca cggtgccgcc gcggcgcacc ggcctgcgcg tgcgcgtgct cggctggttt
      841 gcgcgccgct tcggtaccga gttcgtgatg ccgaccgtgg tgcgccgcgc ccacgcggac
      901 tacctcgcca caccggtgga ccgcagtggc catcgtgacc acttcgcctt gcccggcctg
      961 ctcggcggtg ctggtcgacg gcaccgcgcg cagagcggca acaccctgcg tgccgcggtg
     1021 ctcggtgcga acgacgggct ggtttccaac gtgtcactgg tgatgggcat ggccggtgcc
     1081 gccaccggcg accgcgcggt gctgcttgcc ggcctggccg ggctggtggc cggcgcctgc
     1141 tcgatggcgc taggcgaatg gctcagcgtc aacagctcgc gcgagttcta ccaggcgcag
     1201 atcaccgagc gtgccgagcg tctggccgcg gtacccgagg ccgggctggc gaacattgcc
     1261 gacatctatc gcgacaaggg gctcgacccg gccgctgccg agcacctcgc cggccacgtc
     1321 accgcctcgc cgcgtgcgac gctggacatg ctggtgcgcg aggagctggg cgtcgacccg
     1381 gccgaactgg gcggctcggc atggagtgcg gcgatttcgt cgttcttcct gttcgcgtgc
     1441 ggtgcgttgt ttccggtggc gccgtatttc ttcactggcg gcaataccgc gctcgccgcc
     1501 agcgcagtca ccacggcggc cgggctcagc ctgatcggcg tcggcacggc gctgttcacc
     1561 ggccgcggcg tgctgttttc gatcgcgcgc cagttcggca tcacgcttgg tgccgccgcg
     1621 gtgacctacg gggtcggcca cctgctgggc gtggcgctcg cgggctgaac gcgcgcgctt
     1681 gctatgctgc agcctgccgc gagcaacggg gtgggtggat gtccgcagtg gtcgagttga
     1741 cgcgtgagtt gatcgcccgc cggtcggtga cgccggagga tgccggctgc caggcgctgc
     1801 tggccgagcg cctcgcgcgc gccggttttc gcatcgagca tcatcgcttc ggcgcggtcg
     1861 acaacctgtg gacggtgcat ggcgagcgag gcccgacgct ggtctttctc ggccacaccg
     1921 acgtggtgcc gagcgggccg gaagcggcgt ggcacagccc gccgttcacg ccgagcgtgc
     1981 gcgatggacg tctatatggc cgcggcgcgg cc
//
LOCUS       DASSVL010000198         2271 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_314832, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000198 DASSVL010000000
VERSION     DASSVL010000198.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2271)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2271)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2271
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_314832"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            54..824
                     /locus_tag="VFM52_03390"
     CDS             54..824
                     /locus_tag="VFM52_03390"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HET8764242.1"
                     /translation="MIEVDGLCKQYDRLAAVRDLSFAVRPGEIMGLVGPNGAGKTTTL
                     RCVTGIIPATSGTVRVNGVDLAQDPAGAKRQLAFMPDEPRLFEHLTVMQHLNFVARLY
                     GVADFEARALPILSELEMADKRDLLPGELSRGMKQKLVIACGLLHGPKVVIFDEPLTG
                     LDPGGIRRMKQVMKRLAADGAAVILSSHMLGLIQEVCTHLLILKNGMKVADGSVAEIQ
                     ARYLGDGGGSLEEVFFRATGDVDGDGHAAPASAAARDA"
     gene            821..>2271
                     /locus_tag="VFM52_03395"
     CDS             821..>2271
                     /locus_tag="VFM52_03395"
                     /inference="COORDINATES: protein motif:HMM:NF028272.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative ABC exporter domain-containing protein"
                     /protein_id="HET8764243.1"
                     /translation="MNAAAAAIARGAGSPWSACVYQQAMSIRNAVVRRVLRLKQPKYL
                     AGAVAGALYFYFFLFRHAFRGHGRDGGPGLERAVGWLHDPAIAPLVLGIAALALLVAM
                     LATWLLPGERTALAFSEAEVAFLFPAPMTRSQLVRYKLLRSQLAILVSSVLLTVVLRR
                     GGALGGSPWLHAIGWWVVLSTVRMHFIGASFARERLRGEGRLAWLRGTGAGALVLAAA
                     IALFWWVRTHVPPPDADALLPWARQVLALPVLAWLLWPLKLVVAPVLAPDAMAFWRAA
                     PAALAVMALHFFWIVRADASFEEAAIAQSRKRARMVEAKREGRLGFRAPGPARKRPAP
                     FRLAPTGFPPVAMLWRNLIALGTNRLRIYAAIAAIVLAGEVWIAGDAQLRPLLKLFFG
                     FGLGVGGWLLVVGPMFVQRSLHRVLAHMDLLKAAPLPGWQLALGELLMPILLLAVAEW
                     LLLAMALLSVLLGGMPMVPTGAAVAAAIGAALLV"
BASE COUNT          262 a          757 c          877 g          375 t
ORIGIN      
        1 gtgccgggga accatgcgag cataggcgcc atggcgtgcc ggggggatgc ccgatgatcg
       61 aagtcgatgg actgtgcaag cagtacgacc gcctggcggc cgtgcgcgat ctctcgttcg
      121 cggtgcggcc gggcgagatc atgggattgg tcgggccgaa cggcgccggc aagaccacga
      181 cgctgcgctg cgtcaccggc atcatcccgg cgacgtcggg cacggtgcgc gtgaacggcg
      241 tggacctcgc gcaggatccc gccggcgcca agcgccagct cgccttcatg cccgacgagc
      301 cgcggctgtt cgagcacctc accgtgatgc agcacctgaa cttcgtcgcg cgcctctacg
      361 gcgtggcgga tttcgaggcg cgcgcgctgc cgatcctgtc cgagctggag atggcggaca
      421 agcgggacct gctgcccggc gaactctcgc gcggcatgaa gcagaagctg gtgatcgcct
      481 gcgggttgct gcacgggccg aaggtggtga tcttcgacga accgctcacc ggcctcgacc
      541 cgggcggcat ccgccgcatg aagcaggtga tgaagcggct ggccgcggac ggcgcggcgg
      601 tgatcctgag ctcgcacatg ctcgggctga tccaggaggt gtgcacgcac ctgctgatcc
      661 tcaagaacgg catgaaggtc gccgacggca gcgtcgcgga gatccaggcg cgttatctcg
      721 gcgacggcgg cgggagcctc gaggaggtct tcttccgcgc cacgggcgac gtggacgggg
      781 acggccacgc cgcgcctgcg tccgcggcgg cgcgcgacgc atgaacgcgg cggccgcggc
      841 catcgcgcgc ggcgccggtt cgccgtggag cgcctgcgtc taccagcagg ccatgtcgat
      901 ccgcaacgcg gtcgtgcgcc gcgtgctgcg gctgaagcag ccgaaatacc tggcgggcgc
      961 ggtcgcaggt gcgctgtact tctatttctt cctgttccgg cacgcgttcc gcggtcatgg
     1021 acgcgacggc gggccgggcc tcgagcgcgc ggtcggctgg ctgcacgatc cggcgatcgc
     1081 gccgctggtg ctcggcatcg cggcgctggc gctgctggtg gcgatgctgg cgacgtggct
     1141 gttgccgggc gaacgcaccg cgctggcctt cagcgaagcg gaagtcgcct tcctgttccc
     1201 cgcgccgatg acgcgctcgc agctggtgcg ctacaagctg ctgcgttcgc aactcgcgat
     1261 cctggtgtcg tcggtgctgc tgaccgtggt gctgcggcgc ggcggcgcgc tcggcggcag
     1321 tccgtggctg cacgcgatcg gctggtgggt cgtgctgtcg acggtgcgca tgcatttcat
     1381 cggtgcgtcg ttcgcgcgcg agcgcctgcg cggcgaaggg cgcctggcgt ggctgcgcgg
     1441 caccggcgcc ggcgcgctgg tgctggcggc cgccatcgcg ctgttctggt gggtgcgcac
     1501 gcacgtgccg ccgccggatg ccgacgccct gctgccgtgg gcgcggcagg tgctggcgct
     1561 gccggtgctc gcctggttgc tgtggccgct gaagctggtc gtcgcgccgg tgctggcgcc
     1621 ggacgccatg gcgttctggc gcgcggcgcc cgccgcgctg gcggtgatgg cgttgcattt
     1681 cttctggatc gtgcgcgccg acgcaagctt cgaggaagcg gcgatcgcgc agtcgcggaa
     1741 gcgggcgcgc atggtcgaag cgaagcgcga gggacgcctg ggcttccgcg cgccggggcc
     1801 ggccaggaag cggccggcgc cgttccggct cgcgcccacg ggattcccgc cggtggcgat
     1861 gctgtggcgc aacctgatcg cgctcggcac gaaccgcctg cgcatctacg ccgcgatcgc
     1921 cgcgatcgtt ctggcgggcg aggtctggat cgcgggcgat gcacagttgc ggccgctgct
     1981 caagctgttc ttcggtttcg gcctgggcgt cggcggctgg ctgctggtgg tcgggccgat
     2041 gttcgtgcag cgctcgctgc atcgcgtgct cgcgcacatg gacctgctga aggcggcgcc
     2101 actgccggga tggcagctcg cgctcggcga actgctcatg ccgatcctgc tgctcgcggt
     2161 cgcggagtgg ctgctgctgg cgatggcctt gctctcggtc ctgctcggcg gcatgccgat
     2221 ggtgccgacc ggggccgccg tcgccgctgc gatcggcgcg gcgctgctgg t
//
LOCUS       DASSVL010000199         2752 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_258598, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000199 DASSVL010000000
VERSION     DASSVL010000199.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2752)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2752)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2752
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_258598"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..217)
                     /locus_tag="VFM52_03400"
     CDS             complement(<1..217)
                     /locus_tag="VFM52_03400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003476444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylpyruvate dioxygenase"
                     /protein_id="HET8764244.1"
                     /translation="MNAQLKYGMQVTTFENPMGIDGFEFVEFAAPAGRAHELHDLFKL
                     MGFTAVLKHKRRAITVYRQGGVNFLINE"
     gene            336..782
                     /locus_tag="VFM52_03405"
     CDS             336..782
                     /locus_tag="VFM52_03405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008213529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family winged helix-turn-helix
                     transcriptional regulator"
                     /protein_id="HET8764245.1"
                     /translation="MPVANQVDHAPLELERFIPYQLSIVSNTVSQAIADDYEARHDLS
                     VTEWRVMAVLARFDGLSAREVAERTAMDKVAVSRALSRLVAAGRVRRHMHENDKRRSV
                     LGLTPAGWLIHDDVAPMARQRERELLARLSPDEQEWLGRILDKLMP"
     gene            complement(987..2483)
                     /locus_tag="VFM52_03410"
     CDS             complement(987..2483)
                     /locus_tag="VFM52_03410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019467030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015333 - peptide:proton symporter
                     activity [Evidence IEA];
                     GO_process: GO:0015833 - peptide transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide:H+ symporter"
                     /protein_id="HET8764246.1"
                     /translation="MNAPATAVPAYPQLFGHPRPLWMLFMTEFWERFAFYSVSWALAL
                     YVVAEFYHGDATGQAWASAIFGSYTALIYGTGIFGGWVADKLIGYQRTILLGAAVMAA
                     GLFVLAVPTRVMLLAGLALVIVGDGLFKPNISSIVGQLYGRDDPRRDRGFTLFYMGIN
                     AGALVAPLLTGWMAGYFTATPMQQNYRLVFLTAGVGMLLSLVWFWFGRRSLHGVGRPA
                     PGAEGRGRVLAVAVGALVAVPVVYWLLEGVGASGLQWILGALFVVVAVLLLAEAARSG
                     AVSVQRVVAMLIIFAFNVLFWMFYYQLGTTFNFLAENLVDRQMFGGWTFPVGWFQSVS
                     PLAIIVFAPLVALTWSALDKRHREPSIPRKFGFGLVFNALGFLVLVYALSRLLGANGL
                     IPFWPLVLCYVMQTLGELCLSPIGLSMVTKLAPPKLVGFAMGGWFLSLAVGGNLSGLF
                     ASRITGAHGLTAQAALSGFTFSFWLLLGAGVLLLAIAPLVNRLMHGVK"
     gene            complement(2553..>2752)
                     /locus_tag="VFM52_03415"
     CDS             complement(2553..>2752)
                     /locus_tag="VFM52_03415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006448742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8764247.1"
                     /translation="HVSGETGMTVDSALSGYTTGFWILLGGGIADYAGVYGRVFGYGL
                     AVAVAFALARPRGRRLMHGVH"
BASE COUNT          509 a          965 c          910 g          368 t
ORIGIN      
        1 cctcgttgat gaggaaattc acgccgccct ggcgatacac cgtgatcgcg cgacgcttgt
       61 gcttgagcac cgcggtgaag cccatcagct tgaacaggtc gtgcagctca tgtgcccgcc
      121 cggccggcgc agcgaattcg acgaattcga aaccgtcgat ccccatcggg ttctcgaagg
      181 tggtgacctg catgccgtac ttcagctggg cgttcatggc ttggctcctg ggttcgatgc
      241 gcgatggcgt gcacggactg acgcgaaggt gcaaccattc cggtaacccg actttatagt
      301 ttcacctgta accacttgca aggaacgttg caccaatgcc ggttgccaac caagtcgacc
      361 atgcaccgct cgaactggag cggttcatcc cctaccagct ctccatcgtg tccaacaccg
      421 tcagccaggc gatcgccgac gactacgagg cgcgccacga cctgagcgtc accgagtggc
      481 gcgtgatggc cgtgctggcg cgcttcgacg gcctttccgc gcgcgaggtc gccgaacgca
      541 ccgcgatgga caaggtggcc gtgagccgcg cgctgtcgcg cctggtcgcc gccggccgcg
      601 tgcgccggca catgcacgag aacgacaagc ggcgctcggt gctcggcctg accccggccg
      661 gctggctgat ccacgatgac gtggcgccga tggcgcgcca gcgggagcgg gagttgctgg
      721 cgcgattgtc gcccgacgag caggagtggc tggggcggat actggacaag ttgatgccgt
      781 gagggggttg ggggcctgaa gttcgcgcgg cgcggcgttt tcgccgggtt tccgatcttg
      841 tttctcgcat ccggcatcgg aaccagggcc gttgcccaag tcccgggaca gggcttctgc
      901 cctgcccggg gctcgccttg atcgggcgca gcccgatcaa ggctccgtcc ggcgcggagc
      961 gccggacgag gggccatcca tggcccctat ttcaccccgt gcatcaggcg gttcaccagc
     1021 ggggcaatcg cgagcagcag cacgccggcg ccgagcagca gccagaaact gaaggtgaac
     1081 ccgctcagcg ccgcctgcgc ggtgagcccg tgcgcgccgg tgatgcggct cgcgaacagg
     1141 ccggaaaggt tgccgcccac cgcgagtgac aggaaccagc cgcccatcgc gaagccgacc
     1201 agcttcggcg gcgccagctt ggtcaccatc gacaggccga tcggcgacag gcacagctcg
     1261 cccagcgtct gcatcacgta gcacagcacc agcggccaga acgggatcag gccgttcgcg
     1321 cccaggagcc gcgacagcgc gtacaccagc accaggaaac caagcgcgtt gaacaccagc
     1381 ccgaatccga acttgcgcgg tatcgacggc tcgcggtggc gcttgtcgag cgcgctccag
     1441 gtgagcgcga cgagcggcgc gaacacgatg atcgcgagcg ggctgaccga ctggaaccag
     1501 ccgaccggga acgtccagcc gccgaacatc tgccggtcga cgaggttctc ggcgaggaaa
     1561 ttgaacgtgg tgccgagctg gtaatagaac atccagaaca gcacgttgaa cgcgaagatg
     1621 atcagcatcg cgaccacgcg ctgcaccgac accgcgccgc tgcgcgcggc ctcggccagc
     1681 agcagcacgg ccaccaccac gaacagcgcg ccgaggatcc actgcaggcc actcgcgccg
     1741 acaccttcga gcagccagta caccaccggc accgccacca gcgcaccgac cgccaccgcc
     1801 agcacgcgcc ccctgccttc cgcgcccggc gccgggcggc cgacgccgtg gagcgaacgc
     1861 cggccaaacc agaaccacac caggctgagc agcatgccga cgccggcagt gaggaacacc
     1921 agccggtagt tctgctgcat cggcgtcgcg gtgaagtacc ccgccatcca gccggtcagc
     1981 agcggcgcga ccagcgcgcc ggcgttgatg cccatgtaga acaacgtgaa gccgcggtcg
     2041 cggcgcgggt cgtcgcggcc gtagagctgg ccgacgatgg aggagatgtt cggcttgaac
     2101 agtccgtcgc cgacgatcac cagcgccagg ccggccagca gcatcacacg cgtgggcacc
     2161 gccagcacga acaacccggc cgccatcacc gccgcgccga gcaggatggt gcgctggtag
     2221 ccgatcagct tgtcggccac ccagccaccg aagatgccgg tgccgtagat cagcgcggtg
     2281 tagctgccga agatcgcgct ggcccacgct tgcccggtcg catcgccgtg atagaactcg
     2341 gccaccacgt acagcgccag cgcccagctc acgctgtaga acgcaaagcg ctcccagaac
     2401 tcggtcatga acagcatcca cagcgggcgc ggatggccga acagttgcgg gtaggccggc
     2461 acggccgtgg caggtgcgtt cacgcgagtt ccgtcggggg caacaggggc gcaggtgtag
     2521 cggccggcgc gcccgccgtc aaacgcaccg cgtcaatgca caccgtgcat caggcgccgg
     2581 ccccgtggcc gcgccagcgc aaacgccacg gccacggcga gcccgtagcc gaacacgcgc
     2641 ccgtacacgc cggcgtagtc ggcgatgccg ccgccgagca ggatccagaa gccggtggtg
     2701 tagccggaca gcgccgagtc cacggtcatg ccggtctcgc cgctgacgtg ac
//
LOCUS       DASSVL010000200         2368 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1304012,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000200 DASSVL010000000
VERSION     DASSVL010000200.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2368)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2368)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2368
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1304012"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..283
                     /locus_tag="VFM52_03420"
     CDS             <1..283
                     /locus_tag="VFM52_03420"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8764248.1"
                     /translation="LTLQSVSLRSQAAVPLRFNGAAGSWRVVGRATGPHAIAASLGSD
                     EAALSHILVLLSGGLLDVGEPATTVATLDISPSDRNGQVWFDCARGKIL"
     gene            505..>2368
                     /locus_tag="VFM52_03425"
     CDS             505..>2368
                     /locus_tag="VFM52_03425"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HET8764249.1"
                     /translation="MARDTLNSLTVAAGAVAASIDIPLEHFADMSDSIRASDLQGDKI
                     ALTSRLLRLQAAVPPSAAAFAVNASGQLLASSSPFAAADASVGDTDWFRRATADNGMA
                     LSLQRSDSWLRGGMSLLLTKIVRDAAGKPAGLVGALFRFDDLARMIGHTWLGPGVSIE
                     LRGVDGPLLLSAQPATGPSPATESRSDTDWGSELLAIANRVLGVPVQLTVAAPLHSVD
                     ATVSASIGTDVALKTHWLGTRAVSILGAYLLAVWLSCIALAVSVRAKGEGSVPSPIGF
                     GADWEVELDRRGCVRTVHGFAPDQLRDAVGQPLLTALGLVPSQAAGQRVAEAMDAHSF
                     QDNIQVALSGEEGADRVHRLRIEPLPDGRYVCAGRDVTLEVELLAKLQSATSDCAAAQ
                     EQAAMVARDRDRVLAALGHDVRTPMNSVMGICSLLLDSELEQEQRLWLERIRASCDAL
                     LAMLNGLLEIASGEVGGAGLQTDEVDVIGLVREVTDTLQPQARDKGLELKTRYDDLLR
                     GHWLIDPARMRQVLFNLVGNAIKFTHHGHVEVRASAVAGSSDTPCIKLAVSDTGPGIA
                     PEDRDLIFERFRRGHDQENGAHPGLGLGLALCRENAILMGGTLTVESALGVGSEF"
BASE COUNT          380 a          718 c          807 g          463 t
ORIGIN      
        1 cctgacgctc cagtctgtct cgctgcggtc ccaggctgct gttcccctgc gtttcaacgg
       61 ggcggcgggc tcgtggcgtg tagtgggccg cgcgacgggg ccgcacgcga tcgccgcgtc
      121 ccttggttcc gatgaggctg cgctcagcca tattctggtg ctgctcagcg gagggctgct
      181 cgatgtaggt gagccggcga cgacggtcgc tacgttggac ataagtcctt cggacaggaa
      241 cgggcaagtc tggttcgact gtgctcgcgg caagatatta tgacccgtta gctcaagttg
      301 tgcctcccgt gcgacgggct gaaaccaaat cgtaggcttc gacggatagg tttcggccca
      361 taatcatggg aggtcgcggt gaagcgcgtg gtcaacatcc tcgtcgcgcc gcttcggctg
      421 atttcgcgcc ccgtcgccct tttggctgtg gcgtagctgc tggttggcgc agggggtctc
      481 acagcattca tccagaccgc gcaggtggcg cgcgacacgc tcaacagcct cacggttgcg
      541 gcgggtgcgg tggcggcttc aatcgacata ccgctcgagc actttgccga catgagcgac
      601 agcatccggg ccagcgatct ccagggcgat aagattgcgc tgaccagccg gcttctgcgt
      661 ctccaggctg cggtgccgcc ttctgctgcc gcgtttgcag tgaatgcctc ggggcagttg
      721 ctggcctcct cgtcaccctt cgcggctgcc gacgcgtcgg tgggagacac tgactggttc
      781 cggcgtgcca ctgcagacaa tggtatggcg ctgtccctgc agcgcagcga ttcgtggctt
      841 cggggcggga tgtcgctcct gctgaccaag atcgtacgcg atgcggcggg caaaccggcc
      901 ggcttggtcg gcgccctgtt ccggttcgat gatcttgccc ggatgatcgg gcatacatgg
      961 ctcgggcccg gtgtctcgat cgagctccgt ggcgtcgatg gtccgctgct gttgtctgct
     1021 cagcccgcga caggcccgtc tccggctacc gagagccgat cggataccga ctggggcagc
     1081 gaattgctgg cgatcgcgaa ccgggtgctg ggtgttccag ttcagctaac ggtagcggcg
     1141 ccgctgcata gcgtggatgc aaccgtcagc gccagcatcg gcactgatgt cgcgctgaag
     1201 acccattggc tggggacgcg cgcagtatcc atccttggtg cctacctgct ggcagtttgg
     1261 ctttcctgca tagccctcgc tgtctcggta cgcgccaagg gcgaaggttc ggttccatca
     1321 ccgatcggtt ttggagctga ctgggaggtt gagctcgatc gtcgcggctg tgtcaggacg
     1381 gttcacggct tcgcgcccga ccagctgcgg gatgcagtcg gccaaccgct gctgacggcg
     1441 cttggattgg taccatcgca ggctgcaggc caacgcgtcg ccgaggcgat ggatgcgcac
     1501 tcgtttcagg acaacatcca ggtcgcgttg tccggtgagg agggcgcaga ccgcgttcac
     1561 cgattgcgga tcgaaccgct gccggacggc aggtatgtct gtgccggccg cgacgtgacg
     1621 ctcgaggtcg agctgctcgc aaagctgcag tccgcaacaa gtgactgcgc cgcggcgcag
     1681 gaacaggcag ctatggtggc gcgtgaccgc gaccgggtcc tggcggcgct gggtcacgac
     1741 gtgcgcacgc cgatgaactc ggtcatgggc atctgttcgc tgctgctcga cagtgaactg
     1801 gaacaggagc agcgactttg gctggagcgc atcagggcga gctgcgacgc attgctcgcg
     1861 atgctgaacg ggctgttgga gatcgccagc ggcgaggtcg gcggcgcagg attgcagact
     1921 gacgaagtgg atgtgatcgg ccttgtgcgt gaggtcaccg atacgctgca accacaagcg
     1981 cgcgacaagg gcctcgaact gaaaacacgc tacgacgacc tgctgcgcgg tcactggctg
     2041 attgatccgg cccgcatgcg ccaagtgttg ttcaacctgg tcggcaacgc catcaagttc
     2101 acccaccacg gacacgttga ggtgcgggcc tccgccgttg ccggttcatc ggacacaccc
     2161 tgcatcaagc tcgcagtctc ggacaccgga ccaggcatcg cgccggaaga tcgtgacctg
     2221 atcttcgagc ggttccgccg cggccacgat caggagaacg gcgcgcatcc aggtcttggt
     2281 ctcggcttgg cactgtgccg cgagaacgcg atattgatgg gtggcacgct gacggtggaa
     2341 agcgcgctgg gcgtcggcag cgagttta
//
LOCUS       DASSVL010000201         2455 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_725289, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000201 DASSVL010000000
VERSION     DASSVL010000201.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2455)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2455)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2455
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_725289"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..446)
                     /locus_tag="VFM52_03430"
     CDS             complement(<1..446)
                     /locus_tag="VFM52_03430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017460597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HET8764250.1"
                     /translation="MKKTLLALALATTGMLVIPASFAQSAPADNAGWFINGNVGRTSL
                     NHGPYDNHDTGYALNGGYRWSLAPNFALGAEVGYNDLGNIRAKNIFHSAPIMAPGRSQ
                     LHGWTAGANARLGLSDSWYLSGRAGVYSWTGHGLSNDVNPVRKSLD"
     gene            677..>2455
                     /gene="tkt"
                     /locus_tag="VFM52_03435"
     CDS             677..>2455
                     /gene="tkt"
                     /locus_tag="VFM52_03435"
                     /EC_number="2.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008207533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004802 - transketolase activity [Evidence
                     IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HET8764251.1"
                     /translation="MRLSAAIRSSSMTTRRQLANAVRALAMDAVEAANSGHPGMPMGM
                     ADIAEVLWNDFYQHNPANPHWFNRDRFLLSNGHGSMLQYALLHLTGYDLPIAELKRFR
                     QLHSKTPGHPEYNETPGVETTTGPLGQGIANGVGFALAERLLAERFNRPGFDVVDHHT
                     WVFCGDGCLMEGISQEAISLAGKWRLGKLTLIYDDNNISIDGQVPGWFADDTAGRFEA
                     CGWRVLRGVDGHDPAQIKAALAAAKDDVGKPTLVMCKTIIGFGAPHKEGTAASHGAAL
                     GKDEVAAARDMLDWHYAPFEIPAEIYAGWDAKAAGAKREAAWNELFAAYAKANPAPAA
                     ELERRLAGKLPEDWAATSQAYIAKLQAEGPDLASRKASQNTLNAFGPLLPELIGGSAD
                     LASSNLTMWKGSVSVTESSPDANYMHYGVREFGMTAIGTGIALHGGFVPYDATFLVFS
                     DYARNAVRMSALIGAHSIHVYTHDSIGLGEDGPTHQPIEQMATLRYIPGLDMWRPCDA
                     VESAVAWKAAIERKSGPSGLVFSRQTLKHQQRTPQQVTDIARGAYVLLDPADTKFKAI
                     LIATGSEVELAMEAARTLAQQGVPVRV"
BASE COUNT          415 a          822 c          828 g          390 t
ORIGIN      
        1 tcgtcgaggc tcttgcggac cgggttgacg tcgttgctga ggccgtggcc ggtccagctg
       61 tagacaccgg cgcggccgga caggtaccag ctgtcactca gcccgagccg ggcgttggcg
      121 ccagcggtcc agccgtgcag ctgcgagcgg ccgggagcca tgatcggcgc gctgtggaag
      181 atgttcttcg cgcggatgtt gcccaggtcg ttgtagccga cctcggcgcc cagcgcgaaa
      241 ttcggcgcca gcgaccagcg gtagccgcca ttcagcgcgt aaccggtgtc gtggttgtca
      301 tacgggccgt ggttgagcga ggtgcggccg acgttgccgt tgatgaacca gcctgcgttg
      361 tcggccggtg cgctttgcgc gaacgaagcc gggatcacca gcatgccggt cgtggcaagg
      421 gcaagggcga gcagggtctt tttcatggag agtctcctgt tattggggaa atcggcgtgc
      481 gtccgtgggg aaagggccgt gcgccgcatg cccgatgtcg ttcaatcacc gaacacgtcc
      541 ccttggatat ggccaagccg gaaagattca ataccgggtg gtttactatt aattcggcgt
      601 taacgttgct gactggaagc cgcggcttgc gtgcctgcgc tgctgcaccg cgacaggact
      661 ccgtgattgc gccaaaatga ggctttcggc cgctatccgg agctcatcga tgactacccg
      721 ccgccaactt gccaacgctg tacgcgcact cgcgatggat gctgtggagg cggcaaattc
      781 cgggcatccg ggcatgccga tgggcatggc cgacatcgcc gaggtgctgt ggaacgactt
      841 ctaccagcac aacccggcca acccgcactg gttcaaccgc gaccgtttcc tgctgtcgaa
      901 cggccatggc tcgatgctgc agtacgcctt gctgcacctg accggctacg acctgccgat
      961 cgccgagctc aagcgcttcc gccagctgca ttcgaagacg ccgggccatc ccgagtacaa
     1021 cgaaaccccg ggggtcgaga ccaccaccgg cccgctcggg cagggcatcg ccaatggcgt
     1081 cggcttcgcg ctcgccgagc gcctgctggc tgaacgcttc aaccgccccg gcttcgacgt
     1141 cgtcgaccac cacacctggg tgttctgcgg cgacggctgc ctgatggaag gcatctcgca
     1201 ggaggcgatc tcgctcgccg gcaagtggcg gctcggcaag ctcacgctga tctacgacga
     1261 caacaacatc tcgatcgacg gccaggtgcc cggctggttc gccgacgaca ccgccggccg
     1321 cttcgaggcg tgcggctggc gcgtgctgcg cggcgtcgac ggccacgacc ccgcgcagat
     1381 caaggcggcg ctggcggcgg cgaaggacga cgtcggcaag cccacgctgg tgatgtgcaa
     1441 gaccatcatc ggcttcggcg cgccgcacaa ggaaggcacg gcggcaagcc atggcgccgc
     1501 gctgggcaag gacgaggtgg ctgccgcgcg cgacatgctc gactggcact acgcgccgtt
     1561 cgagatcccg gccgagatct acgccggctg ggatgcgaag gccgccggcg ccaagcgcga
     1621 ggccgcgtgg aacgagctgt tcgctgccta cgccaaggcc aacccggcgc ccgccgccga
     1681 actcgagcgc cgtctcgccg gcaagctgcc ggaagactgg gccgcaacct cgcaggcgta
     1741 catcgccaag ctgcaggcgg aaggcccgga tctcgccagc cgcaaggcgt cgcagaacac
     1801 gctcaacgcg ttcggcccgc tgctgcccga gctgatcggc ggttcggccg acctcgccag
     1861 ttcgaacctc accatgtgga agggttcggt gagcgtcacc gaatccagcc cggatgccaa
     1921 ctacatgcat tacggcgtgc gcgagttcgg catgaccgcg atcggcaccg gcattgcgct
     1981 gcacggcggc tttgtgccgt acgacgccac cttcctggtg ttttccgact acgcgcgcaa
     2041 cgcggtgcgc atgagcgcgc tgatcggcgc ccactcgatc cacgtctaca cccacgactc
     2101 gatcggcctg ggcgaggatg gcccgaccca ccagccgatt gagcagatgg cgacgctgcg
     2161 ctacattccc ggcctcgaca tgtggcgccc atgcgacgcg gtcgaatccg cggtggcgtg
     2221 gaaggcggcg atcgagcgca agagcggccc gagcgggctg gtgttctcgc gccagacgct
     2281 caagcaccag cagcgcacgc cgcagcaggt caccgacatt gcgcgcggcg cctacgtgct
     2341 gctcgatccg gcggacacca agttcaaggc gatcctgatc gccaccggct ccgaggtgga
     2401 gctggcgatg gaagccgcgc gcacgctggc gcagcagggc gtgccggtgc gcgtg
//
LOCUS       DASSVL010000202         6184 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1332560,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000202 DASSVL010000000
VERSION     DASSVL010000202.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 6184)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6184)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6184
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1332560"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1990)
                     /locus_tag="VFM52_03440"
     CDS             complement(<1..1990)
                     /locus_tag="VFM52_03440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007512765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0008663 - 2',3'-cyclic-nucleotide
                     2'-phosphodiesterase activity [Evidence IEA];
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA];
                     GO_process: GO:0009166 - nucleotide catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 2',3'-cyclic-nucleotide
                     2'-phosphodiesterase/3'-nucleotidase"
                     /protein_id="HET8764252.1"
                     /translation="MSIRPVAWLLPALLLAACAHAPFVSSTLPDGTRATVAILETTDI
                     HANVLGYDYYQGKTDPTLGFERTATLIAQARREFPNHFLFDSGDTIQGTALADYQAQV
                     QKPACNQELAVYRAMDAVGYDGGTAGNHEFNYGLDYLSQVTGTPMDVDAGTRRRCAGP
                     RFPMVLANVDGVRGGKPIFPPWTLVTKPVTVRRPDGSQARVPLRVAIIGFTPPPIMQW
                     DRANLAGKVTVDGVVEAARKYLPQIRAAHPDLVVALVHGGLDTAAYTPQMENAGWHLA
                     GVPGIDVLLLGHSHTSFPGPRFAHMPEVDDVRGFVRGKPAVMGGFFGKDLGVVALALD
                     RRDGRWVIDPAHTHSEVRPICREAGNPATCVAPDPAIAPLVAAVQAATVAHLDTPIGR
                     STIRLSSYFADVGDMSALAVVNAAQRDYVRTALPRTHPELAGVPVLSAAAAFRTGFGG
                     ADDYTDVAPGALTVRNAADLYYYPNTLAAVLTDGAGVKAWLEQSAERFNRIDPVRRDA
                     QALINPRFPGFNFDQIQGGLSYVIDVSKPVGARIVDLRYDGRPVTPAQRFVVATNNYR
                     ASGGGDFPGLDGKTIVLATTEGARDIVARWIAAHGTLDRTTLPPASWHFAPLRAAGPV
                     TFTSAAGKAPIARADDLPGVRQLRDHGDGTATYAIDFAR"
     gene            2146..4083
                     /locus_tag="VFM52_03445"
     CDS             2146..4083
                     /locus_tag="VFM52_03445"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009975 - cyclase activity [Evidence IEA];
                     GO_process: GO:0009966 - regulation of signal transduction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HET8764253.1"
                     /translation="MRVRAWWLGSWLGLAAALAPGVLSARAGPASTAAAFDRLADRLD
                     RGEIVFTSHDDMARLLDQLQRDVPPDDVRRELRYQYLYCVIGMADDPHAGIAYANRGL
                     AAARRIGYADAEINFLFCRGGNEEGLPDPAAAMADYDAAIAIARKVENHQLLADALTW
                     RGRLQSHNGEYARAVVDLLEAQRYYASVGGTKQEEDNLLNVAAAYRRLGEYAKARGFL
                     DQVLAAGVAEHDVGRQMTAHMELGFIDLEADPPRLDRARAHFEAALPLARQAQGASTV
                     ASVQLGLAQVDNQGGRWRDALAKLDAASAGMASLHNHWNDDMVALQRGIAHAGLGQLA
                     QALTDFDLAEQLLRKSGNLRYYRLLLQRRSQVYEAQGNAKLALADLQHAIKVQATLDH
                     RARSDTATLMRYQFDTAQREAENRRLLATQRVQAQQLISLQHARRWQQLALSFGALLI
                     ALLSWLAIRQIRMARRLRKIAATDPLTGIANRRSIEWRGQRLLDWAQAEGQPFAVALL
                     DVDHFKLVNDQHGHQAGDAVLVRLAAVCRDALRQGDVIGRIGGEEFVLLLPGAGSEPA
                     RDVAERLRLAVAALKLDDVAPGLAVTISLGVTVSHAGDGEFGALVERADRALYRAKAA
                     GRDRVAVADSQEPGGQGPGMR"
     gene            complement(4149..4790)
                     /gene="rpiA"
                     /locus_tag="VFM52_03450"
     CDS             complement(4149..4790)
                     /gene="rpiA"
                     /locus_tag="VFM52_03450"
                     /EC_number="5.3.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007807292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004751 - ribose-5-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0009052 - pentose-phosphate shunt,
                     non-oxidative branch [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-5-phosphate isomerase RpiA"
                     /protein_id="HET8764254.1"
                     /translation="MGNANEKQAAGMAALRYVEDGAIVGVGTGSTVGYFIDALGGIKN
                     RIRGAVSSSEQSSAKLKALGIEVLDLNAVGPLALYIDGADECDPFKRLIKGGGAALTR
                     EKIVAAAAQKFVCIIDSSKRVDILGKFPLPIEVIPMARSLVAREIVKLGGQPVWREGV
                     VTDNGNWILDVHNWRITDPVGLERQLNQLAGVVTVGLFAQRPADVVLIGDRVM"
     gene            5021..>6184
                     /gene="kch"
                     /locus_tag="VFM52_03455"
     CDS             5021..>6184
                     /gene="kch"
                     /locus_tag="VFM52_03455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008208947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="voltage-gated potassium channel protein"
                     /protein_id="HET8764255.1"
                     /translation="MRRWRTAVAALAHHLHARGWFPHVPLAILLVLGAAWLLRLDLGA
                     GWPGQLQRLLHGEFNLAPRALPALLISLGLLTMGVGLLLRSRLAWLMAVLLALTALVN
                     LLVGQAHAHVLLGYFIVLLLALLSAWRQFGRSSVAASTLFALTSIAMLLLYATFGAFY
                     LGGDFRPPIADLLTALYYAMVTMSTVGYGDIVPVTPQAKLFAVSVIVLGVAVFATSLT
                     AVIAPMVSRSLQRIVQRKGTGMKRENHFVVIGNTALAINTWRELARRGQPVTRLLYDP
                     NNATGAGADTVVGDPSDLAVLREAGADRARAVLAMLGDDSENAFIVLAVKELGGAART
                     VAAVNDANHLSRVRLVQPDVLIAPQVLGGELTAMLLSGEQVTGDFVLKRVFQQA"
BASE COUNT          876 a         2059 c         2266 g          983 t
ORIGIN      
        1 agcgcgcgaa atcgatcgcg taggtcgccg tgccgtcgcc gtggtcgcgc agttggcgca
       61 cgccgggcag gtcgtcggcg cgggcgatcg gcgccttgcc ggcggcgctg gtgaaagtca
      121 ccgggccggc ggcccgcagc ggcgcgaagt gccacgaggc cggtggcagc gtggtgcggt
      181 cgagcgtgcc gtgggccgca atccagcgcg cgacgatgtc gcgcgcgcct tccgtcgtgg
      241 ccagcacgat ggtcttgccg tcgagccccg ggaaatcgcc gccgccgctg gcgcggtagt
      301 tgttggtggc gaccacgaag cgttgcgccg gcgtcaccgg cctgccgtcg tagcggagat
      361 ccacgatgcg cgcgccaacc ggcttggaga cgtcgatgac gtagctgagg ccaccctgga
      421 tctggtcgaa gttgaagccc ggaaagcgtg ggttgatcag tgcctgggcg tcgcgccgca
      481 cggggtcgat ccggttgaaa cgttccgccg attgctccag ccacgccttg acgccggcgc
      541 catcggtgag cacggcggca agcgtgttcg ggtagtagta gagatccgcg gcgttgcgca
      601 cggtgagggc gcccggcgcc acgtcggtgt agtcgtcggc gccgccgaag ccggtgcgga
      661 acgcggctgc cgccgagagc accggcactc cggccagttc cgggtgcgtg cgcggcaatg
      721 cggtgcgcac gtagtcgcgt tgtgcggcgt tgaccaccgc cagcgcgctc atgtcgccga
      781 cgtccgcaaa gtagctggaa agccggatcg tgctgcgccc gatcggggtg tcgagatggg
      841 ccacggtggc ggcctgcacc gccgccacca gcggcgcgat ggccgggtcc ggcgcgacgc
      901 aggtggcggg gttgcctgct tcgcggcaga tcgggcgcac ctcgctgtgg gtgtgcgcgg
      961 ggtcgatcac ccagcggccg tcacggcggt cgagcgccag cgcgaccacg ccgagatcct
     1021 tgccgaagaa gccgcccatc accgccggct tgccgcgcac gaagccgcgc acgtcgtcca
     1081 cctcgggcat gtgcgcaaag cgcgggccgg ggaaactggt gtgcgaatgg ccgagcagca
     1141 gcacgtcgat gccgggcacg ccggcgagat gccagccggc gttttccatc tgcggcgtgt
     1201 acgccgcggt gtcgagcccg ccgtgcacca gtgcgacgac gaggtcggga tgcgcggcgc
     1261 ggatctgcgg caggtacttg cgcgcggcct cgaccacgcc gtcgacggtg accttgccgg
     1321 ccaggttggc gcggtcccac tgcatgatcg gcggcggcgt gaagccgatg atcgcgacgc
     1381 gcagcggcac gcgggcctgg ctgccgtccg gacggcgcac ggtgaccggc ttggtcacca
     1441 gcgtccacgg cggaaagatc ggcttgccgc cgcgcacgcc atcgacgttg gccagcacca
     1501 ttggaaagcg cgggccggcg cagcggcgtc gggtgccggc atccacgtcc atcggcgtgc
     1561 cggtcacctg ggaaaggtag tccagcccgt agttgaactc gtggttgccg gcggtgccgc
     1621 cgtcgtaacc gacggcgtcc attgcgcggt acaccgccag ctcctggttg cacgccggct
     1681 tctgcacctg cgcctggtag tcggccagcg ccgtgccctg gatggtgtcg ccgctgtcga
     1741 acaggaaatg gttcgggaac tcccggcgcg cctgggcgat cagcgtcgcc gtgcgctcga
     1801 agcccagcgt cgggtcggtc ttgccctggt agtagtcgta gccgagcacg ttggcgtgga
     1861 tgtcggtggt ttcgaggatc gccaccgtgg cgcgcgtgcc gtcgggaagc gtggatgaga
     1921 cgaacggggc atgggcgcag gccgccagca gcagcgcggg cagcaaccag gcaacgggac
     1981 ggatcgacat ggcgacgaca acgggcatgc aaagcggcaa cgctagcaga tcgcggccgc
     2041 acgccgccgg cgcgggaggt tcaagggcgc tgtcatggtg ccgataccta gcttgtggtc
     2101 ccgaaattgc atggcatgag ccggttcctt ccttggagga ttcgcgtgcg cgtgcgggct
     2161 tggtggcttg gatcgtggtt ggggctggcg gcagcgctgg cgcccggcgt gctgtccgca
     2221 cgcgccggac cggcgagtac ggccgccgcg ttcgaccgcc tggccgatcg tctcgaccgc
     2281 ggcgagatcg tgttcacgtc gcacgacgac atggcccgcc tgctcgacca gctgcaacgc
     2341 gacgtgccac cggacgatgt ccgccgcgag ttgcgctacc agtatctgta ttgcgtgatc
     2401 ggcatggccg acgacccgca cgccggcatt gcctatgcca atcggggact ggcggcggcc
     2461 cggcgcatcg gctatgccga tgccgagatc aatttcctgt tctgccgggg cggcaacgag
     2521 gaaggcctgc ccgaccccgc tgccgcgatg gctgactacg acgccgcgat tgcgatcgcg
     2581 cgcaaggtgg agaaccacca gttgctggcg gacgcgctga cctggcgcgg ccggctgcaa
     2641 tcgcacaatg gcgaatatgc ccgggccgtc gtcgacctgc tcgaggccca gcgctactac
     2701 gccagcgtgg gcggcaccaa gcaggaggag gacaacctgc tcaacgtcgc ggccgcctac
     2761 cggcgcctcg gcgaatacgc gaaagcgcgc ggcttcctcg accaggtgct ggcggccggg
     2821 gtggcggaac acgacgtggg acggcagatg accgcccaca tggaactcgg cttcatcgac
     2881 ctcgaggccg atccgccgcg gctcgaccgg gcacgtgcgc acttcgaggc ggcgctgccg
     2941 ctggcacgcc aggcgcaagg ggcatccacc gtggcatcgg tgcaactcgg gctggcgcag
     3001 gtggacaacc agggcggacg ctggcgcgat gccctggcca agctggacgc ggcgagcgcc
     3061 ggcatggcgt cgctgcacaa tcactggaac gacgacatgg tcgcgctgca gcgcggcatc
     3121 gcgcatgccg gattggggca gttggcgcag gcgctcaccg atttcgacct ggccgagcaa
     3181 ctcctgcgca agagcggcaa cttgcgctat taccgcctgc tgctgcagcg gcggtcgcag
     3241 gtctacgagg cacaaggcaa cgcgaagctc gcattggccg acctgcagca cgcgatcaag
     3301 gtgcaggcca cgcttgacca tcgtgcgcgc tcggacaccg ccacgctgat gcgctaccag
     3361 ttcgacaccg cgcagcgcga ggcggaaaac cggcgcctgc ttgccaccca gcgggtgcag
     3421 gcacagcaat tgatttcgct gcagcacgcg cggcgctggc agcagctggc gctgtcattc
     3481 ggcgccttgc tgatcgcgct gctgagctgg ctcgcgatcc gccagatccg catggcgcgg
     3541 cggttgcgca agatcgccgc caccgacccg ctgaccggta ttgccaaccg gcgcagcatc
     3601 gaatggcggg gccagcgtct gctggattgg gcgcaggcgg agggccagcc gtttgccgtt
     3661 gccttgctcg acgtcgacca tttcaagctg gtcaacgacc agcacggtca ccaggccggc
     3721 gatgccgtgc tggtgcggct ggcggcggtg tgccgcgatg cgctgcgcca gggtgacgtg
     3781 atcggccgca tcggcggtga ggaattcgtg ctgctgctgc cgggcgcggg gagcgagccg
     3841 gcacgcgacg tcgccgagcg cctgcgcctg gcggttgccg cgctgaagct cgatgacgtt
     3901 gcgccgggac tcgcggtgac catcagcctt ggcgtcaccg tgagccacgc cggcgacggc
     3961 gaattcggcg ccctggtgga acgcgccgac cgcgcgctgt atcgcgccaa ggccgccggg
     4021 cgcgaccggg tggcggtggc ggacagccag gagccgggcg gacagggccc cgggatgcga
     4081 taggccgggc ttcccgcccg gctttcccgt gccggcccgg gatccgccgc gtcgggcttc
     4141 ggcccgacct acatcacccg atcgcctatc agcaccacgt cggccgggcg ttgcgcgaac
     4201 aggccgacgg tgaccacgcc ggcgagctgg ttgagctggc gttcgaggcc gaccgggtcg
     4261 gtgatccgcc agttgtgcac gtcgaggatc cagttgccgt tgtcggtcac cacgccctcg
     4321 cgccacaccg gctggccgcc gagcttgacg atctcgcgcg ccaccaggct gcgcgccatc
     4381 gggatcacct cgatcggcaa cgggaatttg ccgaggatgt ccacccgctt gctcgaatcg
     4441 atgatgcaca cgaatttttg cgccgcggcg gcgacgatct tctcgcgcgt cagcgccgcg
     4501 ccgccgccct tgatcaggcg cttgaatgga tcgcactcgt cggcgccgtc gatgtacagc
     4561 gccagcggcc cgacggcgtt gaggtcgagc acctcgatgc cgagcgcctt gagttttgcg
     4621 ctggattgct ccgaactgga caccgcgccc cggatgcggt tcttgatgcc gcccagcgcg
     4681 tcgatgaaat aacccaccgt gctgccggtg ccgacgccga cgatcgcgcc gtcctcgacg
     4741 tagcgcagcg cggccatgcc tgccgcctgt ttctcgtttg cgttgcccat gctcgcgtgc
     4801 cggtgatgag ggggcgtcat gatccccgat tccgcgctgt cgtgcacttt ccggtcgatg
     4861 gcggccgcac ggcgcggtcg ctatcgtggg gcggctggaa gcctgggcgt aaaccattcc
     4921 gggcgggagg ccgggcccgc gtggcgggct tcgcggcccg gatgattccc gcggccacgg
     4981 cttccgggca ctgatcatca acgagggagc gatcgggccg atgcgacgtt ggcgaacggc
     5041 ggtggcggca ctggcgcatc acctccacgc gcgtggctgg tttccgcacg tgccgctggc
     5101 gattctgctt gtgctcggcg cggcatggct gctgcggctc gatctcgggg ccggctggcc
     5161 aggccagctg caacgcctgc tgcacggcga attcaatctc gcgccgcgcg cgctgccggc
     5221 gctgctgatc agtctcgggc tgctcaccat gggcgtcggc ctgctgctgc gctcgcgcct
     5281 ggcgtggctc atggccgtgc tgctggcgct gacggcgctg gtcaatctgc tggtggggca
     5341 ggcgcacgcg cacgtgctgc tggggtattt catcgtcctg ctgctggcgt tgctgtccgc
     5401 atggcggcag ttcgggcggt cgagcgtggc ggccagcacg ctgttcgcgc tgacctccat
     5461 cgcgatgctg ttgctgtacg ccacctttgg cgccttttac cttggcggcg atttccgccc
     5521 gccgatcgcg gacctgctca ccgcgctgta ctacgcgatg gtgaccatga gtaccgtggg
     5581 ttacggggat atcgtgccgg tgacgccgca ggcgaagctg tttgccgtct cggtgatcgt
     5641 gctcggcgtc gcggtgttcg ccacttcgct gacggcggtc atcgcgccga tggtgagccg
     5701 ttcgctgcag cgcatcgtgc aacggaaggg aaccggcatg aaacgcgaaa atcattttgt
     5761 cgtgatcggc aacaccgcgc tggcgatcaa tacctggcgc gagctggcgc ggcgcgggca
     5821 gccggtgacc aggctgctgt acgacccgaa caacgcgacg ggggccggcg cggataccgt
     5881 ggtcggcgac cccagcgacc tcgccgtgct gcgcgaggcc ggggccgacc gcgcccgcgc
     5941 cgtgctggcg atgctgggcg acgactccga gaacgcgttc atcgtgctgg cggtgaagga
     6001 gctgggcggc gccgcgcgca ccgtcgcggc ggtcaacgat gcgaaccacc tgagccgggt
     6061 gcggctggtg cagcccgacg tgctgatcgc gccgcaggtg ctgggtggcg agctgaccgc
     6121 gatgctgctg tccggcgagc aggtgaccgg ggatttcgtg ctgaagcgcg tgttccagca
     6181 ggcc
//
LOCUS       DASSVL010000203         3927 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1022220,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000203 DASSVL010000000
VERSION     DASSVL010000203.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3927)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3927)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3927
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1022220"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(4..894)
                     /locus_tag="VFM52_03460"
     CDS             complement(4..894)
                     /locus_tag="VFM52_03460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007513253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="J domain-containing protein"
                     /protein_id="HET8764256.1"
                     /translation="MEFKDYYQILGVKPDASDAEIKTAYRKLARQYHPDRNKQAGAEE
                     KFKAINEAHEVLHDAEKRRAYDQVRAGGYRGGEQFRPPPGWGQQGQGFDFGGNDGEFS
                     DFFESLFNRGGGRGQARARRGGDVQAHVDIDLHTAFAGGRTRLNLQDGKGERVLEVKI
                     PAGIQAGQVIRLAGQGRPGSSGAPSGDLLLEVGIRDDARFQLDGRDVRHVLAIAPWEA
                     ALGATIAVPTLAGQVELRIPPGSQSGRKLRLKGRGMPGTPPGDQLVELSIRAPTAATD
                     KQRAAYEALHKQFADFDPRG"
     gene            complement(1034..1477)
                     /locus_tag="VFM52_03465"
     CDS             complement(1034..1477)
                     /locus_tag="VFM52_03465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014402572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp20/alpha crystallin family protein"
                     /protein_id="HET8764257.1"
                     /translation="MTITRHVAWGIPNDMQSFRQAFERFLGQDDGDQSNVVTSQWAPQ
                     VDIKEEEKRFVILADVPGVDPAQIEVSMDKGILTIKGERAADGDLSRYTRQERVHGTF
                     HRRFSLPDSADAEGITASGKFGVLEISIPKKAETTPRRISISTTE"
     gene            1603..2091
                     /locus_tag="VFM52_03470"
     CDS             1603..2091
                     /locus_tag="VFM52_03470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008211776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin"
                     /protein_id="HET8764258.1"
                     /translation="MSIQIGQPLPDVAIRLVEDGIHEQRTGELFAHGKTVLFGVPGAF
                     TPTCSEKHLPGYVAAFDAFRERGIAVHCLAVNDAYVMQAWAANRKVPQGLKMLADGNA
                     DFTRALGLELDGSAYGMGLRARRFALYAADGVVKLLHVEAPGELRVSTATAMLAAIDA
                     LR"
     gene            complement(2273..>3927)
                     /locus_tag="VFM52_03475"
     CDS             complement(2273..>3927)
                     /locus_tag="VFM52_03475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017462230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="DNA gyrase C-terminal beta-propeller
                     domain-containing protein"
                     /protein_id="HET8764259.1"
                     /translation="VVLNNLFQQTQLQVTFGINMVALVDGQPRTLSLKEILEAFIRHR
                     REVVTRRTIFDLRKARARAHILEGLTVALANIDEMIELIKTSPSPQEARERMLARKWQ
                     PGVVGALLAAAGAEASRPEDLDPREGLKPDGYQLSDVQAQEILAMRLHRLTGLEQEKL
                     SDEYKAILETIRGLIEILEDPDRLLAVIRGELEAIRTEFGDARRTEIQHSKEDLNVLD
                     LIAPEDMVVTLSHTGYIKRQPASTYRAQKRGGKGRSASALKDEDVVEQLWVVNTHDTL
                     LTFTSTGRVYWLNVYEIPEAGPGARGKPIINLLSLAEGEKVQAVLTVREYDENHFVFF
                     ATRQGTVKKTPLTEFAFQLQKGKQAINLAEGDALVDVELTDGNSDILLFAANGKVNRF
                     DENTVRAVGRTATGVRGMRLADGIDVVSLIVAAEGDILTATERGYGKRTPLAEFPKKG
                     RGTQGVIGIQCSERNGNLVAAVQVTEAHELMLISNQGTLVRTRVGEISQLGRNTQGVT
                     LMRLPADESLVSVVRLDAEEEDDGDDGETPPVAGTDEPGTEA"
BASE COUNT          564 a         1365 c         1301 g          697 t
ORIGIN      
        1 gcgtcagccg cgcggatcga aatccgcaaa ctgcttgtgc agggcctcgt acgctgcgcg
       61 ctgcttgtcg gtcgccgccg tgggcgcgcg gatcgacagc tccaccagtt gatcgcccgg
      121 tggcgtgccc ggcatgccac gtcccttcaa ccgcagcttg cgccccgact gcgaaccggg
      181 cgggatgcgc agctcgacct gcccggccag ggtgggcacc gcgatcgtcg cgccgagcgc
      241 cgcctcccac ggcgcgatcg ccagcacgtg ccgcacgtcg cggccgtcga gctggaagcg
      301 cgcgtcatcg cggatgccga cctcaagcag caggtcgcca ctcggcgcgc cgctggaccc
      361 cgggcgcccc tgtccggcca gccggatcac ctggccggcc tggatgccgg cgggaatctt
      421 cacctccagc acgcgttcgc ccttgccgtc ctgcaggttg agccgcgtgc ggccgccggc
      481 aaacgcggtg tgcaggtcga tgtcgacgtg cgcctgcacg tcgccgccgc ggcgcgcacg
      541 cgcctggccg cgcccaccgc cgcgattgaa caggctctcg aagaaatcgc tgaactcgcc
      601 gtcgttgccg ccgaagtcga agccctggcc ctgctggccc cagcccggcg gcgggcggaa
      661 ctgctcgccg ccgcggtagc cgccggcgcg cacctggtcg taggcacgcc gcttttccgc
      721 gtcgtgcagc acctcgtgcg cctcgttgat cgccttgaac ttctcctcgg cgccggcctg
      781 cttgttgcgg tccgggtggt attgccgggc gagcttgcgg tacgcggtct tgatctccgc
      841 atcactcgcg tcgggcttga cgccgaggat ctggtaatag tctttgaatt ccaccgttgc
      901 tccacgctgg tcggtatgcg ctggtcggta ccttccccac aagaaacgcg cgcgacgttc
      961 gccgcgcgcg ttccgcgatg gccggatgga tcatcgtccg ccgccggtca tcggtgcaac
     1021 cgcagccgcc ggcttactcc gtcgtgctga tgctgatccg tcgcggcgtg gtttccgcct
     1081 tcttcgggat cgagatttcc agcacgccga acttgccgct ggcggtgatg ccctcggcat
     1141 ccgcgctgtc gggcaggctg aaacggcgat ggaaggtgcc gtgtacccgc tcctggcggg
     1201 tgtagcggct caggtcgccg tccgctgcac gctctccctt gatggtgagg atacccttgt
     1261 ccatgctcac ctcgatctgc gccgggtcca cgccggggac gtcggcaagg atcacgaagc
     1321 gcttctcctc ctccttgatg tccacctgcg gcgcccattg gctggtcacc acgttggatt
     1381 ggtcgccgtc gtcctggccg agaaaccgct cgaatgcctg gcggaacgac tgcatgtcat
     1441 tgggaatgcc ccacgccacg tgccgggtaa tggtcatcgg attgcctcga aagtattgcg
     1501 gcgccaccgc cgcctgcacc aagagataag tgcggcacgc gaggattcaa gcctgcgtgg
     1561 cgcctcggca gcagctacga tgaaagcccc acggagatcc ccatgtccat ccaaatcggc
     1621 cagccgctgc cggacgtcgc catccgtctg gtcgaagacg gcatccacga acagcgcacc
     1681 ggcgaactgt tcgcgcacgg caagaccgtg ctgttcggcg tgcccggcgc gttcacgccg
     1741 acctgctcgg aaaagcatct gcccggctac gtcgccgcct tcgacgcgtt tcgagaacgc
     1801 ggtattgccg tgcattgcct ggcggtcaac gacgcctacg tgatgcaggc atgggccgcc
     1861 aaccgcaagg tgccgcaagg cctcaagatg cttgccgacg gcaacgccga cttcacccgt
     1921 gccctcggct tggagctgga cggcagcgcc tacggcatgg gcctgcgcgc gcgccgcttc
     1981 gcgctgtatg cggcagacgg tgtggtgaag ctgctgcacg tcgaggcgcc cggcgaactg
     2041 cgcgtgtcca ccgccacggc gatgctcgct gccatcgacg cgctgcgctg aggcgcctgg
     2101 cattcggcat gcgcgccagg gtcggggcgc gatacggcgt ctggacggcc attttccgtc
     2161 atgtcgccgg gaatccagcc gcggtaatcc cgacaaccaa accacggccc gaccaggaaa
     2221 cacgaagccc cggcaaaacc ggggcttcgt gtcaattacc gcgaatgacc gatcaggctt
     2281 cggtgccggg ctcgtccgtg ccggcaaccg gcggcgtctc gccgtcgtca ccatcgtcct
     2341 cctcctcggc gtccagccgc accacgctca ccagcgactc gtcggccggc aggcgcatca
     2401 gggtgacgcc ctgggtgttg cggccgagct gggagatttc accgacgcgc gtgcgcacca
     2461 gcgtgccctg gttggagatc agcatcagct cgtgggcctc ggtgacctgc accgcagcca
     2521 ccaggttgcc gttgcgctcg gagcactgga tgccgattac gccctgcgtg ccgcggcctt
     2581 tcttcgggaa ctcggcgagc ggcgtgcgct tgccgtagcc acgctcggtc gcggtgagga
     2641 tgtcgccctc ggcggcgacg atcagcgaca ccacgtcgat gccgtcggcc aggcgcatgc
     2701 cgcgtacgcc ggtcgcggtg cggcccaccg cacgcacggt gttctcgtcg aagcggttga
     2761 ccttgccgtt ggccgcaaac agcaggatgt cgctgttgcc gtcggtgagc tcgacgtcga
     2821 ccagcgcatc gccctcggcg aggttgatcg cctgcttgcc cttctgcagc tggaacgcga
     2881 actcggtgag cggagtcttc ttcaccgtgc cctgcctggt ggcaaagaac acgaagtggt
     2941 tctcgtcgta ctcgcgcacg gtcagcaccg cctgcacctt ctcgccctcg gcaagcgaca
     3001 gcaggttgat gatcggcttg ccgcgcgcgc cggggccggc ctcggggatt tcgtacacgt
     3061 tgagccagta cacgcggccg gtgctggtga acgtgagcag ggtgtcgtgg gtgttcacca
     3121 cccacagctg ctccaccacg tcctcgtcct tcagcgccga cgccgagcgg cccttgccgc
     3181 cacgcttctg cgcgcgatag gtgctggccg gctggcgctt gatgtagccg gtgtgcgaca
     3241 gcgtgacgac catgtcctcc ggcgcgatca ggtcgaggac gttgaggtct tccttggaat
     3301 gctggatctc ggtgcgccgc gcgtcgccga actcggtgcg gatcgcttcg agctcgccac
     3361 ggatcaccgc aagcaggcga tccgggtctt cgaggatctc gatcaggccg cgaatggttt
     3421 cgaggatcgc cttgtattcg tcggagagct tctcctgctc caggccggtc aggcgatgca
     3481 ggcgcatcgc gaggatctcc tgcgcctgca cgtcggaaag ctgatagcca tccggcttga
     3541 ggccctcgcg cgggtcgagg tcctctgggc gcgaggcttc ggcgccagcc gcggccagca
     3601 gggcgcccac cacgccaggc tgccacttgc gcgccagcat ccgctcgcgc gcttcctgcg
     3661 gcgacggcga agtcttgatc agctcgatca tctcgtcgat gttggcgagc gcgacggtga
     3721 ggccctcgag gatatgggcg cgcgcgcggg ccttgcgcag gtcgaagatc gtgcgccggg
     3781 tgaccacctc gcggcggtgg cggatgaacg cctcgaggat ttccttgagg ctcagcgtgc
     3841 gcggctggcc gtcgaccagc gccaccatgt tgatgccgaa ggtgacctgc agctgggtct
     3901 gctggaacag gttgttcagc accacgt
//
LOCUS       DASSVL010000204         2613 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_951210, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000204 DASSVL010000000
VERSION     DASSVL010000204.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2613)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2613)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2613
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_951210"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..187
                     /locus_tag="VFM52_03480"
     CDS             <1..187
                     /locus_tag="VFM52_03480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8764260.1"
                     /translation="NVFDAGLLYASHWNTHALTWRLSVDNLFDHFYWRDTGISGGDSY
                     LFPSAPRLARLSLTVAL"
     gene            232..837
                     /gene="pnuC"
                     /locus_tag="VFM52_03485"
     CDS             232..837
                     /gene="pnuC"
                     /locus_tag="VFM52_03485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014160154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015663 - nicotinamide mononucleotide
                     transmembrane transporter activity [Evidence IEA];
                     GO_process: GO:0015890 - nicotinamide mononucleotide
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinamide riboside transporter PnuC"
                     /protein_id="HET8764261.1"
                     /translation="MTWVELVAALVSTWAVWLTTRRVVWSCPIGLISVLLYAWVFVVA
                     KLYSDALLQGLFGVMILYGWWHWTRHLDATGKVEPTPLPVARGARHLALGALGAVALG
                     ATMHYGTDAALPWLDAALTAASLVGQWWQSRRHIAAWWLWIVVDVVYVGEYVYKDLRI
                     TAVLYVLFVALAVLGLRNWQRARGPRTTAGGAGTGRARVRE"
     gene            834..1145
                     /locus_tag="VFM52_03490"
     CDS             834..1145
                     /locus_tag="VFM52_03490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007511496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-hydroxyacyl-CoA dehydratase"
                     /protein_id="HET8764262.1"
                     /translation="MTAFPYVAVFMLSKPYDFRQFQNELSALDAASSEPPAHSAAPVT
                     TPASRLARAKAEFLALRDRYQLSVADVVAFFPEEEGIVYLQSLIAASAAKPGRRRTKA
                     G"
     gene            1197..1853
                     /locus_tag="VFM52_03495"
     CDS             1197..1853
                     /locus_tag="VFM52_03495"
                     /inference="COORDINATES: protein motif:HMM:NF024901.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4124 domain-containing protein"
                     /protein_id="HET8764263.1"
                     /translation="MNSPIRRACCLIAVPLAAWSFSASAQNIYKCVTGGQVTYTDQPC
                     AAGKGEVLHQASAAETIDHYLRLGQPQLAAAWAKARHLDSLYTARLALYDAAQDAKAK
                     QAEADTIAAQTAAAEAKAQQQQAMATARVAAQTAETDRLAAENTQLRAQNAAYQSELT
                     QPTYYPAYFGGWNPGYYRPPFDHGHVHRPPPVEHKPPPVQGYTVLQACGSLKGGSARC
                     "
     gene            1905..2468
                     /locus_tag="VFM52_03500"
     CDS             1905..2468
                     /locus_tag="VFM52_03500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007806247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8764264.1"
                     /translation="MPRLLATTVTLALLTATGAAMAANDSMSLTHFTPHVEPVLVQVD
                     AQGKVTSASPAYALPPKIDRLLRANLAEMIRKPATDKHGKPIASQFVMNLALEAVPND
                     AGTYDTSFHYVSAQPVPAGSWFWSLEDGHRLALVNRNDRYRGLPRLHRGFPPVRRAPE
                     TGRNWQPAAQPAMQPMPRPASPPSPAR"
BASE COUNT          422 a          948 c          844 g          399 t
ORIGIN      
        1 caacgtgttc gatgcggggc tgctgtatgc cagccactgg aacacgcatg cgctcacctg
       61 gcggctctcg gtggacaacc tgttcgacca cttctactgg cgcgacaccg gcatctccgg
      121 cggcgacagc tacctgttcc ccagtgcgcc gcgcctggcg cggctctcgc tcacggtggc
      181 gttgtaaccg tgatcgagga aatcatccac gccatcgcgg gcatgggtgg catgacgtgg
      241 gtggaactgg ttgccgccct cgtcagcacc tgggcggtat ggctcacgac ccggcgcgtg
      301 gtgtggagct gcccgatcgg gctgatttcc gtactgctct acgcctgggt cttcgtggtg
      361 gccaagctct actccgacgc gctgctgcaa ggcctgttcg gcgtgatgat cctctacggc
      421 tggtggcact ggacgcggca cctggacgcc accggcaagg tggaaccgac cccgctgccg
      481 gtcgctcgcg gcgccaggca cctggcgttg ggtgcacttg gcgccgtcgc gctcggcgcc
      541 acgatgcact acggcacgga cgccgccctg ccgtggctgg acgccgcact caccgccgcc
      601 agcctcgtcg gccaatggtg gcaatccagg cgccacatcg ccgcatggtg gttgtggatc
      661 gtggtggatg tggtctacgt gggcgaatac gtctacaagg acctgcgcat caccgccgtg
      721 ttgtacgtgc tgttcgtggc gctggccgtg cttgggctgc gcaactggca acgtgcacgc
      781 gggccacgga caaccgccgg cggcgccggc acggggcgcg cccgcgtgcg agaatgacgg
      841 cgtttccgta cgttgccgtg ttcatgctct ccaagcctta cgactttcgc cagttccaga
      901 acgaactctc cgcgctggac gccgcctctt ccgagccgcc ggctcacagc gcggcccccg
      961 tcaccacacc ggcatcccgc ctggcacgtg ccaaggccga gttcctcgcc ttgcgcgatc
     1021 gctaccaatt gagcgtggcc gacgtggtgg ccttctttcc ggaggaggaa ggcatcgtct
     1081 acctgcagtc gctgatcgcg gcaagcgcgg ccaagccagg tcggcggcgt accaaggccg
     1141 gctgaaccct ccgcccctca cacgacaacc actgccggca cgcgcataat cgcggcatga
     1201 acagcccgat ccgccgcgcc tgctgtctca tcgccgtgcc gcttgcggca tggtcgtttt
     1261 cggccagcgc gcagaacatc tacaaatgcg tgaccggcgg ccaggtgacc tacaccgacc
     1321 agccgtgcgc cgcgggcaag ggcgaagtgc tgcaccaggc gagcgccgcc gagaccatcg
     1381 accactacct gcgtctcggc cagccgcaac ttgccgcggc atgggccaag gcgcgccacc
     1441 tggattcgct ctatacggca cgcctggcgt tgtacgacgc ggcgcaggac gccaaggcca
     1501 agcaggccga agcagacacc atcgcggcgc aaaccgctgc cgccgaggcc aaagcccagc
     1561 aacagcaagc catggcgacg gcacgggtcg ctgcgcagac ggcggaaacc gaccggctgg
     1621 cggcggagaa cacgcagttg cgggcacaga acgcggccta tcaaagcgag ctgacgcaac
     1681 cgacctacta cccggcctat ttcggtggct ggaaccccgg ctactaccgc ccaccgttcg
     1741 accacgggca cgtgcatcgc ccgccccccg tcgagcacaa gccgccgccg gtccagggct
     1801 acaccgtgct gcaggcctgc ggctcgctca agggcggcag tgcgcgttgc tgagcggcac
     1861 ccggcggcac accgcggtac cggattcgct gcatggaggt gaacatgccc cgcttgcttg
     1921 ccacgaccgt cacgctggcc ttgctcaccg ccaccggcgc cgcgatggcg gccaatgact
     1981 ccatgtcgct cacgcacttc accccacacg ttgagccggt gctggtgcag gtcgacgccc
     2041 agggcaaggt gacctcggcc tcgccggcct acgcgttgcc gccgaagatc gaccgcctgc
     2101 tgcgggcgaa cctcgcggag atgatccgca agccggcgac cgacaagcac ggcaagccga
     2161 tcgccagcca gttcgtgatg aacctggcgc ttgaggcggt acccaatgac gccggcacct
     2221 acgacacgtc gttccactac gtctccgcgc agccggtgcc ggccgggtcg tggttctggt
     2281 cgctcgagga cggtcatcgc ctggcgctgg tcaaccggaa cgaccgctac cgcggactgc
     2341 ccaggttgca ccgcgggttc ccgccggtgc ggcgggcacc ggagaccggc cgcaactggc
     2401 aaccggcggc gcaacccgcg atgcagccga tgccgcgtcc cgccagccca ccgtcaccgg
     2461 cccgctaatt tcgacgccgc aacacacgaa gcccgccatg atggcgggct tcgtcgatcg
     2521 gatcgcagcg tggctcaacc gcccagcagc acgcggttca ggcgctccac gaacgcggcc
     2581 gggtcggcca gttgcgcgcc ggcggcgatc tcc
//
LOCUS       DASSVL010000205         3436 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_174521, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000205 DASSVL010000000
VERSION     DASSVL010000205.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3436)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3436)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3436
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_174521"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..830)
                     /locus_tag="VFM52_03505"
     CDS             complement(<1..830)
                     /locus_tag="VFM52_03505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017460441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ectonucleotide
                     pyrophosphatase/phosphodiesterase"
                     /protein_id="HET8764265.1"
                     /translation="MTAAEAAPRGSVPLRGRGVVALDRILLVGGVAGLLGAVGLLQRL
                     LRGRSLRQHLARHVADVLLLLCLLLALLQLVTDLSLLHGLLELRGRRRRLLRKAGERR
                     EQHAHGTGKCQVSTRPLRDDARHRHVDSAIMGNVLQGRHVRMKFPFRYGFVALLALVA
                     GCATQPATPIGQAPAARPDPVLLVSIDGFRADYFDRGLTPTLAKLAQTGVHAAAMQPS
                     FPSLTFPNHYTLVTGLYPEHHGIVGNSFYDPSRKERYTFTDPKSAGDGSWYGGTPLWS
                     L"
     gene            complement(827..1354)
                     /locus_tag="VFM52_03510"
     CDS             complement(827..1354)
                     /locus_tag="VFM52_03510"
                     /EC_number="2.1.1.63"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007511048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003908 -
                     methylated-DNA-[protein]-cysteine S-methyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylated-DNA--[protein]-cysteine
                     S-methyltransferase"
                     /protein_id="HET8764266.1"
                     /translation="MTTSRETLYYDIMPSPLGPLTLVADADGLREICFESEQRPNAED
                     AWQRDAGRLANARTQLAEYFAGRRTRFDLPLHPRGTPFQREVWDELVRIPFGITISYG
                     ELAQRIGKPKAVRAVGAANGRNPIPIIIPCHRVIGADHSLTGYGGGLWIKRALLGLEG
                     RSMHGDLFVEALETA"
     gene            complement(1405..2892)
                     /locus_tag="VFM52_03515"
     CDS             complement(1405..2892)
                     /locus_tag="VFM52_03515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019397976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AlkA N-terminal domain-containing protein"
                     /protein_id="HET8764267.1"
                     /translation="MSDALATTLPDPRTCEQARLSRDARFDGLFFTAVASTGIYCRPV
                     CPAPPAKRGNVRYFASAAAAEAAGFRPCLRCRPELAPSNPLWQRGDHVVARALQLIEG
                     GALEDGSLDDLATQLDLGARQLRRLFVDRLGVPPISVHTTRRLLFARQLLTETALPIT
                     DVALASGFRSLRRFNAAFALANRMAPRELRRAPRTVSGAALVLRLAYRPPCDFAALLA
                     FLRGRALPGIEQVDERRYARVFGPAEAPGWLRVSAGARGSHALKLELHAPQPAQLLDL
                     VARVRRLFDLDADPRAIAAALRGDPLLCPLLRKHPGQRLPSSWDGFEIAVRAVLGQQV
                     SVAAARTLAARVVQRHGTVLDPAPLPGLDRLFPTPAVLAAADLRALGVTTARAATIRS
                     IARALLDGRVDFNPGQSLPTFVARWTALPGIGDWTAQYIALRVLGHPDAFPAADLILR
                     RAAASGGPTPSASALTARAEAWRPWRAYAVMHLWRSAQPPARSGA"
     gene            3143..>3436
                     /locus_tag="VFM52_03520"
     CDS             3143..>3436
                     /locus_tag="VFM52_03520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007081236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDSL family lipase"
                     /protein_id="HET8764268.1"
                     /translation="MLAALVASWSVFPACADSAGAAAQGWVATWGQAMTSQYVQVAGH
                     DGKPERDAYGQPLDRAPTVEHLTLRQSVNVSAGGKRVRIRLSNYYGRAPLTVSS"
BASE COUNT          543 a         1170 c         1261 g          462 t
ORIGIN      
        1 agcgaccaca gcggcgtgcc gccataccag gagccatcac cggcgctttt gggatcagtg
       61 aaggtgtacc gctccttccg gctgggatcg tagaagctgt tcccgacaat gccgtgatgc
      121 tccggataga gcccggtcac cagcgtgtag tggttgggga aggtgagcga cggaaacgac
      181 ggctgcatcg ccgcggcatg cacgccggtc tgcgccagct tcgccagcgt cggggtcagg
      241 ccgcggtcga aataatcggc acggaagccg tcgatcgaca ccagcagcac cgggtcgggc
      301 cgcgcggcag gcgcctggcc gatcggcgtg gcgggttgtg tcgcgcaacc ggcgaccagc
      361 gcgagcagtg cgacgaaccc atatcggaac ggaaatttca tgcggacgtg cctaccctgc
      421 aaaacgtttc ccatgatggc cgaatcgaca tgccgatgcc gagcatcatc gcgaagaggt
      481 cgcgtcgata cctggcactt gccggtgcca tgggcatgtt gctcgcgccg ctcgccggcc
      541 ttgcgcagca gacgccgccg gcggccgcgc agttccagca gaccatgcag cagcgacagg
      601 tcagtgacca gctgcagaag agccagcagc aggcacagca gcaacagaac gtccgcaacg
      661 tggcgggcaa ggtgctgccg cagggatcga ccgcgcagca ggcgttgcaa caggccgacc
      721 gcgcccagca ggccggcgac gccgcccacc agcaggatac ggtcaagcgc tacgacgccg
      781 cggccgcgca ggggcactga accgcgcggc gccgcctcgg cggcagtcac gcggtttcga
      841 gcgcctcgac gaacaggtcg ccgtgcatgc tgcggccttc gagcccaagc agtgcgcgct
      901 tgatccacaa cccgccgccg tagccggtga ggctgtggtc ggcgccgatc acgcgatggc
      961 aggggatgat gatcgggatc gggttgcgcc cgttcgcggc accgacggca cgcaccgcct
     1021 tcggcttgcc gatgcgctgc gcgagctcgc catagctgat ggtgatgccg aacggaatgc
     1081 gtaccagctc gtcccacacc tcgcgctgga acggcgtgcc gcgcggatgc agtggcaggt
     1141 cgaacctggt gcgccggccg gcaaagtatt cggccagttg cgtgcgggcg ttggcgaggc
     1201 gcccggcgtc gcgttgccag gcgtcctccg cgttcgggcg ctgctcgctc tcgaagcaga
     1261 tttcgcgcag gccgtcggcg tcggccacca gcgtcagcgg gccgagcggg ctcggcatga
     1321 tgtcgtagta cagggtttct cgggatgtcg tcatgggttt gccgctcatg gtcggggacg
     1381 ggtggagatc tggcgccggg ttcatcacgc accgctgcgt gcagggggct gggcactgcg
     1441 ccacaggtgc atcacggcgt aggcgcgcca tggccgccat gcctcggcgc gcgcggtcaa
     1501 cgcgctggcg ctcggggtcg ggccgccgga cgcggcggcg cggcgcagga tcaggtcggc
     1561 agccggaaac gcatcgggat ggccgagcac gcgcaaggcg atgtattgcg cggtccagtc
     1621 gccgatgccg ggcagggcgg tccagcgcgc gacgaaggtc ggcagcgact ggccggggtt
     1681 gaaatccacc cggccgtcga gcagcgcgcg ggcgatgctg cggatcgtcg ccgcgcgcgc
     1741 cgtggtgacg cccagcgcgc gcaggtcggc cgcggccagc acggcgggcg tggggaacag
     1801 gcgatcgagc cccggcagcg gcgccgggtc cagcaccgtg ccgtggcgct gcacgacgcg
     1861 cgcggccagc gtgcgggccg ccgccacgct cacctgctgg ccgagcacgg cgcgcaccgc
     1921 gatctcgaag ccgtcccaac tgctcggcag gcgctggccg ggatgcttgc gcagcagcgg
     1981 gcacagcaag gggtcgccgc gcagcgcggc ggcaatcgcc cgcgggtcgg catcgagatc
     2041 gaacaggcgc cgtacccgcg ccaccaggtc cagcaactgc gcgggctgcg gcgcgtgcaa
     2101 ttccagtttc agcgcgtgcg agccgcgcgc accggcggat acccgcagcc accccggcgc
     2161 ttccgcaggg ccgaacacac gcgcgtagcg acgctcgtcc acctgctcga tgcctggcag
     2221 cgcacggcca cgcaggaatg ccagcagcgc cgcgaaatcg cagggcggac ggtaggccag
     2281 gcgcagtacc agcgcagcgc cggaaaccgt acgcggcgcg cggcgcaact cgcgcggcgc
     2341 catccggttg gccagcgcga acgcggcgtt gaaccggcgc aggctgcgga agccggacgc
     2401 cagcgccacg tcggtgatcg gcagcgcggt ctcggtaagc aactgcctgg cgaacagcag
     2461 gcggcgcgtg gtgtgcacgc tgatcggcgg cacgcccagc cgatccacga acagccggcg
     2521 caactgccgc gcacccaggt cgagctgcgt cgccaggtca tccagcgaac cgtcttccag
     2581 cgcgccgcct tcgatcaact gcagcgcacg cgccaccacg tggtcgccgc gttgccacag
     2641 cgggttgctc ggcgccagct ccgggcggca gcgcaggcag ggccggaaac cggccgcttc
     2701 cgccgccgcg gcactggcga agtagcgcac gttcccgcgt ttggccggcg gcgccgggca
     2761 caccggccgg cagtagatgc cggtgctggc caccgcggtg aagaacagcc cgtcgaaccg
     2821 cgcgtcgcgg ctgagccgcg cctgctcgca ggtgcgcgga tcgggcaggg tggtggcaag
     2881 ggcgtcggac atgccggcag gctagcaccg gtggcgtgag gggactcgcc gttttcggac
     2941 atggatgatg cgggcttcaa gcatggagcg acgctcggca ccagcgccca tcgcttgcag
     3001 gccgttggcg ttgccggctt cgcggcggat ttccggttgc gttgacaatc cgctgcggac
     3061 tgccgaacga tccgaggcgg caatcctctg gcttccaagg caggcacaca tggcacacgc
     3121 acgttccctg gttcgtttgt ggttgctcgc cgcgttggtg gcgtcgtggt cggtgttccc
     3181 ggcatgcgcc gacagtgcgg gagccgcggc gcaagggtgg gtcgccacct ggggccaggc
     3241 gatgacctcg caatatgtgc aggttgccgg ccacgacggc aagccggaac gggacgcgta
     3301 cgggcagccg ctcgatcgcg cgcccacggt cgaacacctg accctgcgcc agagcgtgaa
     3361 tgtcagtgcc ggcggcaagc gcgtgcgcat ccggctgtcg aactattacg gtcgcgcgcc
     3421 gctcaccgtg agcagc
//
LOCUS       DASSVL010000206         3797 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_75374, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000206 DASSVL010000000
VERSION     DASSVL010000206.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3797)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3797)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3797
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_75374"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            182..892
                     /gene="trmB"
                     /locus_tag="VFM52_03525"
     CDS             182..892
                     /gene="trmB"
                     /locus_tag="VFM52_03525"
                     /EC_number="2.1.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007809330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008176 - tRNA
                     (guanine(46)-N7)-methyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(46)-N7)-methyltransferase TrmB"
                     /protein_id="HET8764269.1"
                     /translation="MTDDHTAPEHLRRIRSFVLREGRMTPAQERAFTTQWPRYGIDYT
                     GTQQDFAARFGRTAPLVLEIGFGNGEALAWASEHDGARDYLGIEVHGPGVGRLMNALA
                     ARDASNVRLYRHDAVEVLEHEIAPGTLAEVRIWFPDPWHKARHHKRRLIQPAFVALLA
                     TRVAPGGLLHLATDWEPYAEHMLETLEAAPDWRNAVGPGEYADKPDWRIETHFERRGL
                     NLGHGVRDLLYRRVEPAT"
     gene            1131..2948
                     /locus_tag="VFM52_03530"
     CDS             1131..2948
                     /locus_tag="VFM52_03530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007809326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SLC13 family permease"
                     /protein_id="HET8764270.1"
                     /translation="MMLVLGLVGFTMLMLVLEWIRADLVGLLIVVVIGLTGVIPADKV
                     FNGFAGNAVIAIIAIMIMGEGLDRAGVLAAAARLVMRMAKGMESRLGVVINLMASVFS
                     AIIPSQALAALMIPITSRLSARTGVPISRLLLPMAFCILTGTNTTLIANSPLIVLNDL
                     IVSANANLPAGAHTIPKFGLFSITPAGLLLAAVGIAYFYFFGNRLLPAREDARLKVTP
                     GRTESYFADTYGIVGGTAELTVTAESPLVGMSIGEAEQLHGAPLILAIKSGNDERMAP
                     PADHVIWVGSVLGVLGPREQLDRFANNQLCRLSTRMSQLGELFNPSRAGISEVVIPPV
                     SRFVKHTVGALHLRKRFGISVLAVTHGDKVVRDDVRASTLRAGDTVVVHSTWKNLAMA
                     AEDRDFVVVTDIPKETQRPGKVWQAIGFFVMAKCLALFTDLDLSVAMMCGAVGMLLTG
                     VLNMDEAYKGINWKTIFVTACLIPLGWSMDATGTAAWLAQYVLHYLGDASPWVLQGTL
                     AVLTLLFSQVMSNVGATVMMVPIAISVAIATGGNPSAYAMIVAVSSSNTFLLSSGHPA
                     LMMVTGPGGYRGPDFLRVGIPLTLLMLVVTLVSINLLFR"
     gene            complement(2929..3306)
                     /locus_tag="VFM52_03535"
     CDS             complement(2929..3306)
                     /locus_tag="VFM52_03535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008212514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rieske 2Fe-2S domain-containing protein"
                     /protein_id="HET8764271.1"
                     /translation="MDTRATQTPLCRLADVPDGGTTAIEDVAAVDGESVIVQRRGDTV
                     TAWLNVCPHAGRRLDYAPGQFLRKGEILICAVHGASFNCADGVCVGGPCRGEQLHALP
                     VRVDADGGVWLVSAPALVSGTAG"
     gene            3383..3655
                     /locus_tag="VFM52_03540"
     CDS             3383..3655
                     /locus_tag="VFM52_03540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008212513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8764272.1"
                     /translation="MIFQLPAPRRSRHPLVRALSLLLGLAMVGLLLVFGLVVAGILMV
                     GGAVFLGWRQWRQRHAPAVASRPRPTAANVLEGEFVVIHDKPAAQH"
BASE COUNT          560 a         1359 c         1272 g          606 t
ORIGIN      
        1 gagccatgga tggccctgat ttgaggagcg aggaagaggg gttgggggag agggttcagt
       61 cgaagcgaaa cctcgaccct ccgtgcaagc ttccatctac ctgctccgcc cgcaccctct
      121 cccgcctgcc ggcaccctct cccgagggga gagggattca ctcgacagcc ttccgccagc
      181 catgactgac gaccacaccg cccccgaaca cctccgccgc atccgcagct tcgtgctgcg
      241 cgagggccgc atgacgcccg cgcaggagcg cgcgttcacc acccaatggc cgcgctacgg
      301 catcgactac accggcacgc agcaggattt cgccgcccgt ttcgggcgta ccgcaccgct
      361 ggtgctggag atcggcttcg gcaacggcga ggcactggcc tgggcgagcg agcacgacgg
      421 cgcgcgcgac tacctcggca tcgaggtgca cggccccggc gtgggccggc tgatgaacgc
      481 gctggccgcg cgcgacgcca gcaacgtgcg gctgtaccgg cacgacgcgg tggaggtgct
      541 ggagcacgag atcgcgccgg gcacgctcgc cgaggtgcgc atctggttcc ccgacccgtg
      601 gcacaaggcg cgccaccaca agcggcggct gatccagccg gcattcgtcg cactgctcgc
      661 cacccgcgtc gcccccggcg gcctgctgca cctggccacc gactgggaac cgtacgccga
      721 gcacatgctg gaaacgctcg aagccgcgcc ggactggcgc aacgccgtcg gccccggcga
      781 gtacgccgac aagccggact ggcggatcga aacccatttc gaacgtcgcg gcctgaacct
      841 cggccacggc gtgcgcgacc tgctgtaccg gcgcgtcgag cccgcgacgt gatcgctggg
      901 cggcctttgc cggtatccgg gtcggcctga agcccgaccc gggaaggcag cttcgcggtt
      961 cgcgtggatc gaatgccccg gttcaccagc ccttgcggca cgccgcttat actggcgcgc
     1021 accctctcca gacaggcgcc ctgcgtgacc cggccatcgt cgccacctgc gcacgcctgc
     1081 cgccagcccg cccaggacgc gtgttcgtga cgctttcgct cacccccgaa atgatgctgg
     1141 tgctcgggct ggtgggcttc accatgctga tgctggtgct ggagtggatc cgcgccgacc
     1201 tcgtcgggct gctgatcgtg gtggtgatcg gcctcaccgg cgtgatcccc gccgacaagg
     1261 tcttcaatgg tttcgccggc aacgcggtga tcgcgatcat cgcgatcatg atcatgggcg
     1321 aaggcctgga ccgcgccggc gtgctggccg ccgcggcgcg gctggtgatg cgtatggcca
     1381 agggcatgga gtcgcgcctg ggcgtggtga tcaacctgat ggccagcgtg ttcagcgcga
     1441 tcatcccgag ccaggcgctg gcggcactga tgatcccgat caccagccgg ctgtcggcgc
     1501 gcaccggcgt gccgatctcg cgcctgctgc tgccgatggc gttctgcatc ctcaccggca
     1561 ccaacaccac gctgatcgcc aactcgccgc tgatcgtgct gaacgacttg atcgtcagcg
     1621 ccaacgcgaa cctgccggcc ggcgcgcaca cgatcccgaa gttcggcctg ttcagcatca
     1681 ccccggccgg cctgctgctg gccgcggtcg gcatcgcgta tttctacttc ttcggcaacc
     1741 ggctgctgcc ggcgcgcgag gacgcgcggc tgaaggtgac gccgggccgt accgagagtt
     1801 acttcgccga cacctacggc atcgtcggcg gcaccgcgga gctgacggtc accgccgaaa
     1861 gcccgctggt cggcatgagc atcggcgagg ccgagcagct gcacggcgcg ccgctgatcc
     1921 tcgcgatcaa gagcggcaac gacgagcgca tggcgccgcc ggccgaccac gtgatctggg
     1981 tcggctcggt gctcggcgtg ctcggcccgc gcgagcagct cgaccgcttc gcgaacaacc
     2041 agctgtgccg gctgtcgacg cggatgagcc agctcggcga actgttcaac ccgagccgcg
     2101 ccggcatttc cgaggtggtg attccgccgg tgtcgcgctt cgtcaagcac accgtcggcg
     2161 ccctgcacct gcgcaagcgc ttcggcatct cggtgctggc ggtgacccac ggcgacaagg
     2221 tggtgcgcga cgacgtgcgc gcctcgacgc tgcgcgccgg cgacaccgtg gtggtgcaca
     2281 gcacgtggaa gaacctggcg atggcggcgg aagaccgcga cttcgtcgtg gtcaccgaca
     2341 tcccgaagga aacccagcgc cccggcaagg tgtggcaggc gatcggcttc ttcgtgatgg
     2401 cgaagtgcct ggcgctgttc accgacctgg atctctcggt ggcgatgatg tgcggcgcgg
     2461 tcggcatgct gctgaccggc gtgctgaaca tggacgaggc gtacaagggc atcaactgga
     2521 agacgatctt cgtcaccgcg tgcctgattc cgctcggctg gtcgatggac gccaccggca
     2581 ccgccgcgtg gctcgcgcag tacgtgctgc attacctggg cgacgcctcg ccgtgggtcc
     2641 tgcagggcac gctcgcggtg ctcacgctcc tgttctcgca ggtgatgtcg aacgtcggcg
     2701 cgacggtgat gatggtgccg atcgcgatca gcgtcgcgat cgcgaccggc ggcaacccgt
     2761 ccgcctacgc gatgatcgtc gcggtgtcgt cgtcgaacac cttcctgctc agcagcggcc
     2821 acccggcgct gatgatggtg accggtcccg gcggctaccg cggcccggac ttcctgcgcg
     2881 tcggcatccc gctgaccctg ctgatgctgg tggtcaccct ggtctcgatc aacctgctgt
     2941 tccgctgacc agcgccggcg cactgaccag ccacacgccg ccgtccgcgt cgacccgcac
     3001 cggcagcgcg tgcagctgct cgccgcggca cgggccgccc acgcacacgc cgtcggcgca
     3061 gttgaagctc gccccgtgca cggcgcagat caggatctcg cccttgcgca ggaactggcc
     3121 cggcgcgtag tcgagccggc gcccggcgtg cgggcacaca ttgagccacg cggtcacggt
     3181 gtcgccgcgg cgctgcacga tcacgctttc gccatcgacc gccgccacgt cctcgatcgc
     3241 ggtggtgccg ccgtcgggaa cgtcggcaag ccggcacagc ggcgtctggg tggcccgggt
     3301 atccatcggc acttgtctcg aacgtggaat gcccccatcg taacgcgtcc aagtgcttga
     3361 ttttgcacaa caggttttta acatgatctt ccaactgccc gccccacgcc gctcccgcca
     3421 cccgctcgtg cgtgcgctgt cgctgctgct cggcctcgcg atggtcggcc tgctgctggt
     3481 gttcgggctg gtggtggccg gcatcctgat ggtcggcggc gccgttttcc tggggtggcg
     3541 gcaatggcgc cagcgccacg caccggccgt cgcatcacgg ccgaggccaa ccgccgccaa
     3601 tgtgctcgaa ggcgagttcg tggtcatcca cgacaagccc gccgcccagc actgatcgcg
     3661 tagccgttcc ggcgcggggg ctgcccgcgc ctggcttgcg ggccggtttg tgggccggcg
     3721 aacattccgc cagagccgcg ccaggatgaa tcccggtcca cgaaggccat cgcgcggcaa
     3781 cccatgccgg cgataat
//
LOCUS       DASSVL010000207         3139 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1318492,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000207 DASSVL010000000
VERSION     DASSVL010000207.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3139)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3139)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3139
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1318492"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            74..1375
                     /locus_tag="VFM52_03545"
     CDS             74..1375
                     /locus_tag="VFM52_03545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019465749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008519 - ammonium transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0072488 - ammonium transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ammonium transporter"
                     /protein_id="HET8764273.1"
                     /translation="MVSAAACGLVATPAFAQGAPRLDRGDTAWMLVACVLVLMMTLPG
                     IALFYGGMVRAKNLLSVMMQCFACMVLATLVWVVCGYSLAFSTLGMHAGITGWHSFVG
                     GWDRALLAGLTPASLHGSVPDSVFVLFQLGFAAITPALIVGAWVGRMKFSAMLWFTAS
                     WLLLAYVPLAHMVWGGPGALLADSGVIDFAGGTVVHINAGVAGLVACLVIGKRHGWPR
                     THMPPHNLGYTVIGASLLWLGWFGFNAGSAIAADGSAGMAMLTTQIAAAAAAFGWTTA
                     EWLTHRRASVLGTASGVVAGLVAVTPAAGTCGPGGALVIGLVTGATCFFTATRLKYRL
                     GYDDTLDVFGVHAIAGILGALLTGPFAARALGGFGNVDSAWWQLWVQAKGVAFTIAWS
                     ALASWLILQAIDRTLGLRVDAEQEQEGLDLAQHEEQAYNLS"
     gene            complement(1377..2273)
                     /locus_tag="VFM52_03550"
     CDS             complement(1377..2273)
                     /locus_tag="VFM52_03550"
                     /inference="COORDINATES: protein motif:HMM:NF018431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HET8764274.1"
                     /translation="MSTDLVSILNRHLDAGGGDGDGPVATAIEGLYLMRAHGPTLPVP
                     HVYQPALCVVVQGAKRVLVGETAFDYRAGQALVISLDLPVIGRVTQASSERPFLGFNL
                     DLDTGVLREVVTALGAPPSPAAETSGVSIGALDASLADAMLRLLRLLDTPAAIPVLLP
                     GLLREIGYWLLTGPHADVAYRLALPNGPTRRIAEAIRLLRADIAHPVRVGQLADAANM
                     SPSSFHHHFKLLTTMTPVQYQKQLRLLEARRLMLAGEANASAAAYRVGYESASQFSRE
                     YARMFGAPPRRDVAEARTTVGA"
     gene            2444..>3139
                     /locus_tag="VFM52_03555"
     CDS             2444..>3139
                     /locus_tag="VFM52_03555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003546554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HET8764275.1"
                     /translation="MTAENPTPKIALITGGSRGLGRNTAIALARRGVDVILTYRTRRA
                     EADAAVAEIEAQGRRAAALQLDTGEVAGFANFAGAVRQTLRDQWHAERFDYLVNNAGG
                     GHYASFAETAEADFDALCNVHFKGVFFLTQTLLPQLHDGGRIVNISSGLARFALPGHA
                     AYAAMKGAIEVLTRYLAKELGPRGISVNAVAPGAIETDFGGGNVRDNAEVNQFVASVT
                     AMGRAGVPDDIGPM"
BASE COUNT          440 a         1139 c         1085 g          475 t
ORIGIN      
        1 tttgggatcc gggacggcag cccgctgccg gcgtggtggc tggtggcgtg cgcgtcgcat
       61 cccgtggcgg cggatggttt ccgccgcggc gtgcggcctg gttgcgacgc cggcgttcgc
      121 acagggcgcg ccgcgcctcg accgcggcga caccgcgtgg atgctggtgg catgcgtgct
      181 ggtgctgatg atgacgctgc ccggcatcgc gctgttctac ggcggcatgg tgcgcgcgaa
      241 gaacctgctg tcggtgatga tgcaatgctt cgcgtgcatg gtgctggcga cgctggtgtg
      301 ggtggtgtgc ggttactcgc tggcgttcag cacgctcggc atgcacgcag gcatcaccgg
      361 ctggcactcg ttcgtcggcg gctgggatcg cgcgctgctg gccgggctta cgccggcctc
      421 gctgcacggc agcgtgccgg acagcgtgtt cgtgctgttc cagctcggct tcgcggcgat
      481 caccccggcg ctgatcgtcg gcgcctgggt cggacgcatg aagttcagcg ccatgctgtg
      541 gttcaccgca tcgtggctgc tgctggccta cgtgccgctg gcgcacatgg tgtggggcgg
      601 ccccggcgcg ctgctcgccg actcgggggt gatcgatttt gccggcggca ccgtggtgca
      661 catcaacgcc ggcgtggccg ggctggtcgc ctgcctcgtc atcggcaagc gtcatggctg
      721 gccacgcacg cacatgccgc cgcacaacct cggctacacg gtgatcggcg cgagcctgtt
      781 gtggctcggc tggttcggct tcaacgccgg ttcggcgatc gcggccgacg gcagcgccgg
      841 catggccatg ctcaccacgc agatcgcggc ggccgccgcg gcattcggct ggaccaccgc
      901 cgaatggctc acccaccggc gcgccagtgt gctcggcacc gcgtccggcg tcgtcgccgg
      961 actggtcgcg gtcaccccgg ccgccggcac ctgcgggccg ggcggcgcgc tggtgatcgg
     1021 cctggtcacc ggcgccacgt gcttcttcac cgccacccgg ctcaagtacc ggctcggcta
     1081 cgacgacacg ctcgacgtgt tcggcgtgca cgccatcgcc ggcatcctcg gcgccctgct
     1141 caccggcccg ttcgcggcac gcgcgctggg cggtttcggc aacgtggatt cggcgtggtg
     1201 gcagctgtgg gtgcaggcca agggcgtcgc cttcaccatc gcctggagcg cgctcgcgag
     1261 ctggctcatc ctccaggcca tcgaccgcac gctcggcctg cgcgtggatg ccgagcagga
     1321 acaggaaggc ctcgacctcg cccagcacga ggagcaggcg tacaacctgt cgtgaatcag
     1381 gcgccgacgg tggtgcgcgc ctccgccacg tcgcgccgcg gcggggcgcc gaacatgcgc
     1441 gcgtattcgc ggctgaattg cgacgcgctt tcgtagccga cccggtacgc cgccgcggac
     1501 gcgttggcct cgccggcaag catcagccgc cgcgcctcca gcaggcgcag ctgcttctgg
     1561 tactgcaccg gcgtcatcgt ggtcagcagc ttgaagtggt ggtggaacga cgacggactc
     1621 atgttggcgg cgtcggccag ttgcccgacg cgcaccgggt gcgcaatgtc cgcgcgcagc
     1681 aggcggatgg cctcggcgat gcgccgggtc ggcccattgg gcaacgcaag ccggtacgcg
     1741 acatcggcat gcgggccggt caacagccag tagccgatct cgcgcagcag ccccggcagc
     1801 agcaccggaa tggcggccgg ggtgtccagc aaccgcagca gtcgcagcat ggcgtcggcc
     1861 agcgacgcgt cgagcgcgcc gatggacacg ccgctggttt ccgcggcggg cgacggcggc
     1921 gcgcctagcg cggtcaccac ctcgcgcagc acgcccgtat ccaggtcgag attgaaaccg
     1981 agaaacggcc gctcgctgct ggcctgcgtc acccggccga tcaccggcag atccaggctg
     2041 atcaccagcg cctggcccgc gcggtaatca aacgccgtct cgcccaccaa cacccgcttc
     2101 gccccctgca ccacgacgca cagcgccggc tggtagacgt gcggcaccgg cagcgtcggg
     2161 ccatgggcgc gcatcaggta caggccctcg atggccgtgg ccaccgggcc gtcaccatcg
     2221 ccgccgccgg catcgaggtg gcgattcagg atcgacacga ggtccgttga catgaaaacc
     2281 ctccgcaacc gatggcgctt gcgcagcagg cattgtgcgc ccgcgggcag gttccacccg
     2341 cggctgttgc aggatcaggc aagaatcccg gcgcttgcgg cattcggtgc gccgcgtggc
     2401 gcgcccagaa tgcaggccgt tcccccaccc cacggagcgc gccatgaccg ctgaaaaccc
     2461 gacaccgaaa atcgccctga tcaccggcgg cagccgcggc ctcggccgca acaccgccat
     2521 cgccctcgcc cgtcgcggcg tcgatgtcat cctcacctat cgcacccgtc gcgccgaggc
     2581 cgacgccgcc gtggcggaaa tcgaggccca gggccgccgc gccgccgcct tgcagctcga
     2641 caccggcgag gttgccggtt tcgccaattt cgccggcgcc gtgcggcaga cgctgcgcga
     2701 ccagtggcac gccgagcgct tcgactacct cgtcaacaac gccggcggcg ggcactacgc
     2761 cagctttgcg gaaaccgccg aggccgattt cgacgcgctg tgcaacgtgc atttcaaggg
     2821 cgtgttcttc ctcacccaga cgctgctgcc gcagctgcac gatggcggcc gcatcgtgaa
     2881 catctccagc ggcctggccc gcttcgccct gcccggccac gccgcctacg cagccatgaa
     2941 aggcgccatc gaagtgctca cccgctacct ggccaaggaa ctcggcccgc gcggcatcag
     3001 cgtgaatgcc gtggcgcccg gcgccatcga aaccgacttc ggtggcggca acgtgcgcga
     3061 caacgccgag gtcaaccagt tcgtcgcctc ggtgacggcc atgggccgcg ccggcgtccc
     3121 cgacgacatc ggcccgatg
//
LOCUS       DASSVL010000208         3220 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1262015,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000208 DASSVL010000000
VERSION     DASSVL010000208.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3220)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3220)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3220
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1262015"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2465)
                     /locus_tag="VFM52_03560"
     CDS             complement(<1..2465)
                     /locus_tag="VFM52_03560"
                     /inference="COORDINATES: protein motif:HMM:NF024516.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3971 domain-containing protein"
                     /protein_id="HET8764276.1"
                     /translation="MKAPWHRPLQHGARALGWVAGVAVIALAVLVALAQALLPLVAQH
                     PQWVARELSTRLARPVSFAALDGRWTPAGPLFELRDVVVGVPPGGSGQPIRVPRAELR
                     LDLGGWLLPSRHLVNLRASGLQLDLTRDRDGGWHVNGIGNEAGSQPADFGRLSVALWL
                     DHLKLVITDARHDRHYRLTADQLRLSRQGHEIRVGVLVHRDDVAGVVRGAGRFREDGS
                     AGRLWLAGQGVDWPALLAGVDLGGPTVRSGRGDAAVWLDWKAGKVVRSFARIDLAAVR
                     LATADGAQVVVPGIRGEADLRRTGDGYVLRWAGPGDGALAAWVHAPGTPQLHLEAAAQ
                     GLQLAPLVPWLGALPKLPPALAAWVGEGHPRGRLDTVSLAWSKAAGLTRLVADFSGLG
                     IDHSAAIPGATGLRGSVRGDGEALALSLPAQAATIDARPTFRTPFVLSRLAGTLAAWQ
                     AAGDWHLGIDTLGFEGAGYGGQLRGEVRLPAAGGPPFLDLYAHISHAEVPAAKLFWPV
                     SVMPASTVDWLDHALLGGRIDGADVAVRGDLKDWPFHHHEGRFEARAEISDLRFHYAP
                     DWPDATGVHAIANFINSGMLVEADGGQALGVQVDKAVGLFPDFADATLDLNVDGHGSA
                     ASLLDFVRKSPIASDQAKTLAKLKLGGTGSFGFHLSLPLGDPATALLAGTAKLAGVDV
                     DEPDWTLRLDQLTGPATFDTKGFHAAPLEGGFHGQPAVLDLAIAGATGDPAIAVAADL
                     RGAFRFSDLTLGYPALDWLNPLGSGRSLYDIGYRLARSANGGEPTQTLTLDSTLVGTT
                     LETPVPLAKSATSALPLHVSLHLP"
     gene            complement(2490..>3220)
                     /locus_tag="VFM52_03565"
     CDS             complement(2490..>3220)
                     /locus_tag="VFM52_03565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003479481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ribonuclease E/G"
                     /protein_id="HET8764277.1"
                     /translation="KFMPNLDDRVEHYDGERPIFDLYSVEDEIQHALKKEVPLKSGGY
                     LVVDQTEAMTTIDVNTGAYLGTRNLEETVYRTNLEAAQAAARQLRLRNLGGIIIIDFI
                     DMIDEEHRRQVLRMLAKGLARDHAKTTVYPMSSLGLVEMTRKRTTDSLERQLCEPCPA
                     CGGRGTLKTAETVTYEIFREITRAVRQFDAEKLLVMASPDVVNRILEEESAAVAELEE
                     FISKSIRFQAEEHYSQEQFDVVLL"
BASE COUNT          456 a         1174 c         1139 g          451 t
ORIGIN      
        1 ggcaggtgca ggctgacgtg cagcggcagc gcactggtgg cggacttggc gagcggcacc
       61 ggcgtctcca gcgtggtgcc gacgagggtg gagtccagcg tgagcgtctg cgtgggctcg
      121 ccgccattgg ccgaccgcgc cagccggtaa ccgatgtcgt acaggctgcg gccgctgccc
      181 agcgggttca gccagtcgag cgccggatac cccagcgtga ggtcgctgaa gcggaacgca
      241 ccgcgcaggt cggcggcgac cgcaattgcc gggtcgccgg tggcgccggc gatggcgagg
      301 tcgagcaccg ccggctggcc gtggaagccg ccttcgagcg gggcggcatg gaagcccttg
      361 gtatcgaacg tggccgggcc ggtcagctgg tcgagcctca gcgtccagtc cggctcgtcg
      421 acgtcgaccc cggccagctt cgcggtgccc gcgagcagtg cggtcgccgg atctcccagc
      481 ggcaacgaca agtggaagcc gaagctgccg gtaccgccca gcttgagctt ggccagggtc
      541 tttgcctggt cgctcgcgat cgggctcttg cgcacgaaat ccagcaggct ggcggcgctg
      601 ccgtggccgt cgacgttcag gtccaacgtg gcgtcggcga agtcggggaa cagccccacc
      661 gccttgtcga cctgcacgcc gagcgcctgc ccgccatcgg cctcgaccag catgccgctg
      721 ttgatgaagt tggcgatcgc gtgcacgccg gtcgcgtccg gccaatccgg cgcgtagtgg
      781 aagcgcaggt cgctgatttc cgcgcgcgcc tcgaagcggc cctcgtggtg atggaacggc
      841 cagtccttga ggtcgccgcg caccgcgacg tcggcgccgt cgatgcgccc gccgagcagc
      901 gcgtggtcga gccagtccac ggtgctggcc ggcatcacgc tgaccggcca gaacagcttc
      961 gccgccggca cctcggcgtg gctgatgtgc gcatacaagt cgaggaacgg cggaccgccg
     1021 gccgcaggca ggcgaacttc gccgcgcaat tgcccgccgt agccggcgcc ctcgaagccg
     1081 agggtatcga tgccgaggtg ccaatcgcca gcggcctgcc acgccgccag cgtgccggcc
     1141 agccgggaca gcacgaacgg cgtgcggaac gtgggccgcg catcgatcgt cgccgcctgc
     1201 gccggcaggc tgagcgccag cgcctcgcca tcgccgcgca cgctgccacg caggccggtg
     1261 gcaccgggga tcgcggcgga gtggtcgatg cccaggccac tgaagtcggc aacgaggcgg
     1321 gtcaggcccg ccgccttgct ccacgccagg ctcaccgtat ccagccggcc gcggggatgg
     1381 ccctcgccga cccaggcggc gagcgcgggc ggcaacttcg gcagggcgcc cagccacggc
     1441 accagcggtg caagctgcag gccttgcgcc gccgcttcca gatgcagctg cggcgtgccg
     1501 ggcgcgtgca cccacgcggc cagcgcgcca tcgcccgggc cggcccagcg cagcacgtag
     1561 ccgtcgccgg tgcgccgcag gtcggcctcg ccgcggatgc ccggcaccac gacctgcgcg
     1621 ccatcggccg tggccagccg caccgcggcc aggtcgatgc gcgcgaagct gcgcaccacc
     1681 ttgcccgcct tccagtccag ccacaccgcg gcgtcgccac ggccgctgcg caccgtcggg
     1741 ccgccgaggt cgaccccggc cagcagcgcc ggccagtcga cgccctgccc ggccagccac
     1801 agccgcccgg cgctgccgtc ctcgcggaag cgcccggcgc cgcgcaccac gccggcgacg
     1861 tcgtcgcggt gcaccagcac gccgacgcgg atctcgtgcc cctgccggct caggcgcaac
     1921 tgatcggcgg tcaggcgata gtggcggtcg tgccgcgcat cggtaatgac gagcttgagg
     1981 tgatccagcc acagcgcgac cgagagccgg ccgaaatccg ccggctgcga ccccgcctcg
     2041 ttgccgatgc cgttgacatg ccagccgccg tcgcggtcgc gcgtcagatc cagttgcagg
     2101 ccgctggcgc gcaggttcac caggtgccgc gacggcagca gccaaccgcc gagatcgagg
     2161 cgcagctcgg cgcgcggcac gcggatcggc tgcccgctgc cgccgggcgg cacgccgacc
     2221 accacgtcgc gcagctcgaa caacggcccg gcgggcgtcc agcgcccatc cagcgccgcg
     2281 aagctcaccg ggcgcgccag ccgtgtcgac aattcccgcg ccacccattg cgggtgctgc
     2341 gccaccagcg gcaacaaggc ctgcgccagc gccaccagca ccgcgagcgc aatcaccgcg
     2401 acgccggcga cccagcccag cgcgcgggcg ccgtgctgca gggggcgatg ccagggagcc
     2461 ttcatgcgcg cgctgcgcgg caggcaggtt tacagcagca ccacatcgaa ctgttcctgc
     2521 gaataatgtt cctcggcttg gaagcgtatg ctcttggaga tgaactcctc cagttcggcc
     2581 accgcggcgg attcctcttc gaggatgcgg ttgaccacgt cggggctggc catcaccagc
     2641 agtttctcgg cgtcgaactg gcgcaccgcg cgggtgatct cgcggaagat ctcgtaggtc
     2701 acggtttccg ccgtcttcag cgtgccgcgc ccgccgcagg ccgggcacgg ctcgcacagc
     2761 tggcgttcga ggctgtcggt ggtgcgcttg cgggtcatct cgaccaggcc cagcgaggac
     2821 atcggataca ccgtggtttt cgcgtggtcg cgcgccagcc ccttggccag catgcgcagc
     2881 acctggcgcc ggtgctcctc gtcgatcatg tcgatgaagt cgatgatgat gatgccgccc
     2941 aggttgcgca ggcgcagctg gcgcgccgcc gcctgcgcgg cttcgaggtt ggtgcggtag
     3001 acggtctcct cgaggttgcg cgtgccgaga taggcgccgg tgttgacgtc gatggtggtc
     3061 atcgcctcgg tctggtcgac caccaggtag ccgccggatt tcagcggcac ctccttcttc
     3121 agcgcgtgct ggatctcgtc ctccacgctg tacaggtcga agatcgggcg ctcgccgtcg
     3181 tagtgctcga cgcggtcgtc caggttcggc atgaacttgt
//
LOCUS       DASSVL010000209         2665 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1092657,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000209 DASSVL010000000
VERSION     DASSVL010000209.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2665)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2665)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2665
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1092657"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..652)
                     /locus_tag="VFM52_03570"
     CDS             complement(<1..652)
                     /locus_tag="VFM52_03570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007805997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor plug domain-containing
                     protein"
                     /protein_id="HET8764278.1"
                     /translation="MISRSLRPIHAPQARSFRRQTLAAACTAALFGLAFCGAAAAQDT
                     SPQTTTPTTSEPAKAKTPATKTKQDKKLADQQGAQNLNAVIVTGIAGSIANAIDTKRN
                     SNEIVEAISAVDIGKLPDASIAESLSRLPGLATQRLDGRANMISIRGFSPDFSGTLLN
                     GREQATVGENRGVDFDQYPSELISGAVVYKTPDASLIGQGLSGTVDLHTIRPLDQPG"
     gene            complement(809..1525)
                     /locus_tag="VFM52_03575"
     CDS             complement(809..1525)
                     /locus_tag="VFM52_03575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007510792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2OG-Fe dioxygenase family protein"
                     /protein_id="HET8764279.1"
                     /translation="MTTTPLDLRTTIARDGYAFADAETMRALLDADTLADWPAFVASW
                     DRLGDDRYLAAKGRHRRRRHAVFAADPAGAFKRLPNQPHYQSLAYNNLQGGIERWFEP
                     VEPAIAAGTSLARILAFCRAQFGALAPATAHWHIEVHQFRIEARAAEAGEPTPEGVHR
                     DGVDFVLVFMIDRTNIERGVTTIHAPDGHELGHFTLAHPFEAELIDDHRVFHGVTPVL
                     PKVPGHDAHRDVLVVTFRAA"
     gene            complement(1592..2635)
                     /locus_tag="VFM52_03580"
     CDS             complement(1592..2635)
                     /locus_tag="VFM52_03580"
                     /EC_number="2.5.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007510777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine synthase A"
                     /protein_id="HET8764280.1"
                     /translation="MSIQPDLSAAVGHTPLIRLRHASELTGCEVLGKAELLNPGGSIK
                     DRTALGLILDAERRGQLVPGGVIVEGTAGNTGIGLALIGASRGHRTVIFMPNTQSAEK
                     IAALKMAGAEVHLVPAVPYKDPNHYSHHARRYAEEQNAAHPGSAWFANQFDNTANRDY
                     HAATTAVEIWEQTGGAIDGFTCSAGTGGTLAGVALGLKARKAGTRIALADPAGSALAS
                     YILHGELAASGNSISEGIGSSRITANFDGAPIDTAYSIPDDESVPLLHRLLSEEGWNV
                     GGSSGVNIAGAIRLARELGPGHTVVTILADAGTRYQAKLFNPSFLREKGIPVPAWLDR
                     AFPARPAAHAPAA"
BASE COUNT          360 a          847 c         1005 g          453 t
ORIGIN      
        1 ggccgggttg atccagcggt ctgatcgtgt gcaggtccac ggtgcccgac agcccctggc
       61 cgatcaggct ggcatccggg gttttgtaga cgacggcgcc gctgatcagc tcggagggat
      121 attggtcgaa gtccacgcca cggttttcgc ccacggtggc ctgctcacga ccgttcagca
      181 gtgtgccgga gaagtcgggc gagaaaccgc ggatcgagat catgttggcg cggccgtcca
      241 gacgctgggt ggccaggccg ggcaggcgcg acaggctttc ggcgatgctg gcatcgggca
      301 gcttgccgat gtctacggcc gagatggcct cgacgatttc attcgaattg cgcttggtgt
      361 ctatcgcgtt ggcgatgctg ccggcgatgc cggtgacgat cacggcgttg agattttgcg
      421 cgccctgctg atcggccagc ttcttgtcct gcttggtctt ggtggctggt gtcttggcct
      481 tggctggttc gctggtggtc ggcgtggtgg tttgcggcga ggtgtcctgg gcggcggcag
      541 ccccacagaa tgccaagccg aacagtgctg ccgtgcaggc cgcggccagg gtctggcggc
      601 ggaacgagcg ggcctgtggc gcgtgaatgg gtcgcaacga acgagagatc atgggatgcc
      661 tcgacaggat aaggcgccac tcctcggcgc cgggtggcgc gtaagacccc ctgttccgcc
      721 gcgcgggcga atgttactgc gccgttatgt gacgggcgcg tggcgcgttt ttcctgcgta
      781 cagccacgca ggagtttgcg ggtggcggtc aggcggcccg gaacgtcacc accagcacgt
      841 cgcggtgcgc gtcgtggccc ggcaccttgg gcagcaccgg cgttaccccg tggaacacgc
      901 ggtgatcgtc gatcagctcg gcctcgaacg ggtgggcgag ggtgaagtgc ccgagctcgt
      961 ggccgtccgg cgcgtggatg gtggtgacgc cgcgctcgat gttggtgcgg tcgatcatga
     1021 acaccagcac gaaatccacg ccgtcgcggt gcacgccctc cggcgtcggc tcgccggcct
     1081 cggcggcgcg cgcctcgatg cggaactggt gcacctcgat gtgccagtgc gccgtcgccg
     1141 gcgccagtgc gccgaattgc gcacggcaga acgccaggat gcgcgcaaga ctggtgccgg
     1201 cggcaatcgc tggctcgact ggctcgaacc agcgctcgat accgccctgc aggttgttgt
     1261 aggccaggct ctggtagtgc ggctggttcg gcaggcgctt gaacgcgccc gcgggatcgg
     1321 cggcgaacac ggcatgccgc cggcgccggt ggcgaccctt ggcggccagg tagcgatcgt
     1381 cgcccagccg gtcccagctc gcgacgaacg ccggccagtc ggcgagcgtg tcggcgtcga
     1441 gcagggcgcg catggtctcg gcatccgcga aggcgtagcc gtcacgcgca atagtggtgc
     1501 gcaggtcgag gggcgtggtc gtcatgcgcg cacgctagca gcatgcatat gaagcggcgc
     1561 tggattggcg ccagcggcgc cgccgcgccg ctcaggccgc cggagcgtgt gccgcgggcc
     1621 gggccggaaa cgcccggtcg agccacgccg gcaccgggat gcctttttcg cgcaggaacg
     1681 acgggttgaa cagcttggcc tggtagcgcg tgccggcgtc ggcaaggatg gtgaccacgg
     1741 tgtggccggg gccgagttcg cgggcgaggc ggatcgcgcc ggcgatgttg acgccgctcg
     1801 acccgcccac gttccagcct tcctcgctca gcaggcggtg cagcaatggc accgattcgt
     1861 cgtccgggat cgagtacgcg gtgtcgatcg gcgcgccgtc gaagttggcg gtgatgcggc
     1921 tcgacccgat gccctcgctg atcgagttgc cgctggcggc gagctcgccg tgcaggatgt
     1981 agctggccag cgccgagccg gccgggtcgg ccagcgcgat gcgcgtgccg gctttgcgcg
     2041 ccttgagccc gagcgccacg ccggccagcg tgccgccagt gccggcggag caggtgaagc
     2101 cgtcgatggc gccgccggtc tgctcccaga tttccaccgc cgtggtcgcg gcgtggtagt
     2161 cgcggttggc agtgttgtcg aactggttgg cgaaccacgc gctgcccggg tgcgcggcgt
     2221 tctgctcctc ggcgtagcgg cgcgcgtggt gcgaatagtg gttcgggtcc ttgtacggca
     2281 ccgccggcac caggtgcacc tcggcgccgg ccatcttcag cgcggcgatc ttctcggcgc
     2341 tctgcgtgtt cggcatgaag atcaccgtgc gatggccgcg gctggcgccg atcaaggcga
     2401 ggccgatgcc ggtgttgccg gccgtaccct cgacgatcac gccaccgggc acgagctggc
     2461 cgcgccgctc ggcgtcgagg atcaggccga gcgcggtgcg gtccttgatc gaaccgccgg
     2521 ggttcagcag ctccgccttg cccagcacct cgcagccggt cagctcgctg gcgtggcgca
     2581 aacggatcaa cggggtgtgg ccgacggccg cggaaagatc gggttggatg ctcatgctgg
     2641 aagactcgcg aatcggggcg tgccc
//
LOCUS       DASSVL010000210         3990 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_809927, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000210 DASSVL010000000
VERSION     DASSVL010000210.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3990)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3990)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3990
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_809927"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..507
                     /locus_tag="VFM52_03585"
     CDS             <1..507
                     /locus_tag="VFM52_03585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015446711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin--NADP reductase"
                     /protein_id="HET8764281.1"
                     /translation="MSRKPTGTLVLSDLRPGRRLYLFGTGTVLAPFMSVIRDPETYER
                     FDRIVLAHGVRRVADLAYADYLEHELPQHEYLGELVREKLLYYPTVTREPFRHHGRIT
                     DAIVDGSLAAATGLPPLDPAHDRVMLCGSPGMLEDLSALLDGRGFRASPRTREPGDYV
                     IERAFVEK"
     gene            634..1395
                     /locus_tag="VFM52_03590"
     CDS             634..1395
                     /locus_tag="VFM52_03590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008437885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HET8764282.1"
                     /translation="MPTTQTTRRVRPTPQPITDDGDAAHFCSSCAFAESCAAVGYGKT
                     DLAALHCLVEHVGPFRAGEHVFRTGDPFRAIYAVRTGSVKTRLFDRDGNEQVLGFYLP
                     GEVVGLNAIYPEHFPCDAVALEDTQFCRFSFPAMSALAARQPNVQQHLFRLISKELGA
                     VSLLAGDHSADERMAAFLIDLSNRYASRGYSGTRFHLSMSRGDIANYLRLAAETVSRV
                     LGRFRSQGLIALEGRELVLLDEDGLCEMGASLLPE"
     gene            1580..2839
                     /locus_tag="VFM52_03595"
     CDS             1580..2839
                     /locus_tag="VFM52_03595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007512552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NnrS family protein"
                     /protein_id="HET8764283.1"
                     /translation="MPKVTMDASTSPAAFAGPAALLAAAPHRPLFLAGTIAVLLSMAW
                     WTAELVSLRFGWAAWPQPTIPPVWGHAMLIQYGLFPLFMFGFLLTTFPRWMNGPIVPP
                     RRYLPVAGGVLGGYIVGTVGLLGMPTVLKIGVAMMLAGYLIGVGTLAGVLRASADRNK
                     HGWSTLAAFCVGTVGLALFLAWLLFPDSLSPDLPWVAVRMGTFTFLLPIYFTVTHRML
                     PFFSRNLVPGYEMWRPNWSLPVAWALLIAHVVLVSLGLAQWLWIADVPLALVFGAHWL
                     MWKPWRCMHPGLLAVLHIAFAWLPIGFVLFSAQDIVYATSGAHILGLAPLHAIAIGFF
                     GSMLVAMVTRVTHGHSGRPLQMHPIPWLCFGLLQVVALVRIGAELGGDHYLWLVVAGA
                     GWLVAFLPWVLRSAWIYLTPRADGRPG"
     gene            2851..3306
                     /locus_tag="VFM52_03600"
     CDS             2851..3306
                     /locus_tag="VFM52_03600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008216939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8764284.1"
                     /translation="MHVWFAENLQWVVLVHLTCAILFVGAAAFEVFVLEGLHKRFDAA
                     TMSQLETAVMARVRHYMPVVVTLLFLSGFVLFDQYCNGIQCIGDGRHFGWLLLTKVTL
                     AFAVLGVFANAIWSGFRGRMTVCRFRYTHRIVLTLMAGIVFLAKAMFIL"
     gene            3327..3827
                     /gene="tpx"
                     /locus_tag="VFM52_03605"
     CDS             3327..3827
                     /gene="tpx"
                     /locus_tag="VFM52_03605"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007080293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008379 - thioredoxin peroxidase activity
                     [Evidence IEA];
                     GO_function: GO:0016684 - oxidoreductase activity, acting
                     on peroxide as acceptor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiol peroxidase"
                     /protein_id="HET8764285.1"
                     /translation="MSTVKFHDNPVRVDGSFPAVGSQAPAFHLVGGDLADVTLASLAG
                     KRKVLNIFPSIDTPVCAASVRRFNELAAKMKDTVVLCISADLPFAQGRFCGAEGLKNV
                     KTLSAMRGREFLRDYGVAIADGPLAGVAARAVVVLDAHDKVVHAELVGEITHEPNYDA
                     ALKALA"
BASE COUNT          523 a         1320 c         1397 g          750 t
ORIGIN      
        1 atgtcgcgca agccgaccgg cacgctggtg ctgtccgacc tgaggcctgg caggcgcctg
       61 tacctgttcg gcaccggcac cgtgctggcg ccgttcatga gcgtcatccg cgacccggag
      121 acctatgaac ggttcgaccg catcgtgctc gcgcatggcg tgcgccgggt ggccgacctc
      181 gcctacgcgg attacctcga gcacgagctg ccgcagcacg aatacctggg cgagctggtg
      241 cgggagaaac tgctgtatta cccgaccgtg acgcgcgaac cgttccgcca ccacggccgc
      301 atcaccgacg cgatcgtcga cggttcgctg gccgcggcca ccggcctgcc gccgctcgac
      361 ccggcgcacg accgggtgat gctgtgtggc agcccgggca tgctggagga tctttccgcg
      421 ctgctcgatg gccgcggttt ccgcgcctcg ccgcgcacgc gcgagccagg cgactacgtg
      481 atcgagcgcg ctttcgtcga aaaatgagcg cgccggcaac gtccggtccg cgtggtcgac
      541 cgggcgctgc gtcgctgcac gaactcgcgg gcacgggacg gcttgcgtat catgcgagga
      601 atcgaccaca ccgaccccac ggtgcctgcc gccatgccaa ccacccagac aacccgacga
      661 gtgcgcccga cgccgcagcc gatcacggac gacggcgacg cggcgcactt ctgctcctcc
      721 tgcgcgtttg cggaatcgtg cgcagccgtg gggtacggca agaccgacct ggcggcgctg
      781 cattgcctgg tcgagcacgt ggggccgttc cgtgccggcg agcacgtgtt ccgtaccggc
      841 gacccgttcc gcgcgatcta tgcagtgcgt accggttcgg tgaagacccg gctgttcgac
      901 cgcgacggca acgagcaggt gctcgggttc tacctgccgg gcgaagtcgt gggcttgaac
      961 gcgatctacc ccgagcactt cccgtgtgac gcggtggcgc tcgaggacac ccagttctgc
     1021 cgcttctcgt tccccgcgat gagtgcgctt gcggcgcgcc agccgaacgt gcagcagcac
     1081 ctgttccggc tgatcagcaa ggagctcggt gcggtgtcgc tcctggccgg cgaccacagc
     1141 gcggacgagc gcatggcggc gttcctgatc gatctttcga accgctacgc ctcgcgcggg
     1201 tattccggca cgcgcttcca cctcagcatg tcgcgcggcg acatcgccaa ttacctgcgc
     1261 ctggcggcgg aaaccgtcag ccgcgtgctc gggcgcttcc gcagccaggg cttgatcgcg
     1321 ctcgagggcc gcgagctggt gctgctggac gaggatggcc tgtgcgagat gggcgccagc
     1381 ctgttgccgg agtgatcctt gcgcggcgcg cgggcgctgc cggcctgccg gcggcgccgt
     1441 ttcgcgtgta gggtgtcgca tgcgcgtggg ccggctcgta tagcccgcgt catgcgcgga
     1501 cgcgcggcac ggccgggaat tggcgctgat ccatatcagg actgcgccgc cggcaagctg
     1561 cgaacatgag aagcattcaa tgcccaaggt aaccatggac gcatcgactt ctccggcggc
     1621 tttcgccggc ccggccgcgt tgctcgcggc tgctccgcat cggccgctgt tcctcgccgg
     1681 cacgattgcg gtcttgctca gcatggcgtg gtggacggcg gagctggtgt cgctgcgctt
     1741 cggctgggcg gcatggccgc agccgacgat ccccccggtc tgggggcatg ccatgctgat
     1801 ccagtacggc ctgtttcctc tgttcatgtt cggcttcctg ctgaccacgt tcccgcgctg
     1861 gatgaacggg ccgatcgtgc cgccgcggcg ctacctgccg gtggccggcg gcgtgctggg
     1921 cggctacatc gtcggcaccg tcggcctgct cggcatgccg acggtgctga agatcggcgt
     1981 ggcgatgatg ctggccggtt acctcattgg cgtgggcacg ctggccggcg tgctgcgcgc
     2041 ctcggccgac cgcaacaagc atggctggtc gacgctggcg gcgttctgcg tgggcaccgt
     2101 gggtctggcg ctgttcctcg cctggctgct gttccccgac agcctgtcgc cggatttgcc
     2161 gtgggtggcg gtgcgcatgg gcacgttcac cttcctgctg ccgatctatt tcaccgtgac
     2221 ccaccgcatg ctgccgttct tcagccgcaa cctggtgccg ggctacgaga tgtggcggcc
     2281 gaactggagc ctgccggtgg cgtgggcgct gctgatcgcg cacgtggtgc tggtatcgct
     2341 cggtctcgcg cagtggctgt ggattgccga cgtgccgctc gcgctggtgt tcggcgcgca
     2401 ttggctgatg tggaagccgt ggcgctgcat gcatccgggc ctgctggcgg tgttgcatat
     2461 tgcctttgcg tggctgccga tcgggttcgt gctgttctcg gcgcaggaca tcgtctacgc
     2521 gacgagcggc gcgcacattc tcggcctcgc gccgctgcat gcgatcgcga tcggcttctt
     2581 cggttcgatg ctggtggcga tggtgacccg cgtgacccac ggccactccg ggcgaccgct
     2641 gcagatgcac ccgatcccgt ggctgtgctt cggcttgctg caggtcgtgg cgctggtgcg
     2701 catcggtgcc gagctgggcg gggatcacta cctgtggctg gtggtggccg gcgccggctg
     2761 gctggtggcg ttcctgccgt gggtgctgcg ctcggcgtgg atctatctca cgccacgcgc
     2821 ggatggccgg ccgggctgag gggaacatcc atgcacgtct ggtttgcgga aaacctgcag
     2881 tgggtggtgc tggtccacct cacctgcgcc atcctcttcg tcggcgcggc ggcgttcgag
     2941 gtgttcgtgc tcgaaggcct gcacaagcgc ttcgacgcgg ccacgatgag ccagctcgag
     3001 actgcggtga tggcgcgtgt gcgccactac atgccggtgg tggtgacgct gctgttcctg
     3061 agcggtttcg tgctgttcga ccagtattgc aacggcatcc agtgcatcgg cgacggccgg
     3121 catttcggct ggttgctgct gaccaaggta accttggcgt ttgcggtgct cggcgtgttc
     3181 gccaacgcga tctggtcggg ctttcgcggc cgcatgacgg tgtgccggtt tcgctacacg
     3241 caccgcatcg tgctgacgct catggccggc atcgtgtttc tggccaaggc catgttcatc
     3301 ctgtaaccgt ttcaaggaga tctgcgatgt ctacagtgaa gttccatgac aacccggtgc
     3361 gcgtcgacgg cagcttccct gcggtcggca gccaggcacc ggcgttccac ctagtcggcg
     3421 gcgacctggc cgacgtgacg ctggcgagct tggccggcaa gcgcaaggtg ctcaacatct
     3481 tcccgagcat cgacaccccg gtgtgcgcgg cctcggtgcg ccgcttcaac gagctggcgg
     3541 caaagatgaa ggacaccgtg gtgctgtgca tttcggccga cctgccgttc gcgcagggcc
     3601 gtttctgcgg tgccgagggc ctgaagaacg tcaagacgct gtcggcgatg cgtggccgtg
     3661 aattcctgcg cgactacggc gtggcgatcg ccgatggccc gctggctggc gtcgccgcgc
     3721 gtgcggtggt ggtgctcgat gcgcacgaca aggtggtgca cgccgagctg gtcggcgaga
     3781 tcacccacga gccgaactac gacgcggcgc tcaaggcact cgcctgaacc ccgcgttcat
     3841 ggcgtgaaaa agcccgcggt gcgaaccgcg ggctttttgt tcatcgggtg ccgcgatcag
     3901 gcctgcgtgg tgcgcatcac cggcaggccg aatggctgcc gggcgtcgcg cggcgccgcg
     3961 agccccatgc ccatgctcat gccgcgcccg
//
LOCUS       DASSVL010000211         2222 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1149187,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000211 DASSVL010000000
VERSION     DASSVL010000211.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2222)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2222)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2222
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1149187"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..224
                     /locus_tag="VFM52_03610"
     CDS             <1..224
                     /locus_tag="VFM52_03610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8764286.1"
                     /translation="GPLAGDALASIGIRAEASPANGPLPFFPARLVAPECASAAGASL
                     RRNAFPPIASMRLAPRCARPHAGAPFSMM"
     gene            232..2070
                     /locus_tag="VFM52_03615"
     CDS             232..2070
                     /locus_tag="VFM52_03615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007513074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HET8764287.1"
                     /translation="MFRWFESLIDAFKEPGEGMPPTSVGRFYLFYLRQVWPVFAATVF
                     VGFFVAGIEVALFGFIGRVVDLAKEIPAPGFFRRHGHELGFMAFVVVVARPFFNAVHD
                     LLVNQAITPNLTNRIRWQNHRYVIRQSLAFFQNDYAGRIANRIMQTGTALRQSAVQIV
                     DALWYVIVYVGSAVALFAHEDWRLALPLVGWVVLYVAALAVFIPRLKQRSWRASAAGS
                     KLMGRVVDGYSNVLTLKLFAHGRREEAYVADAMAEQTTKIARMTRVTTALDASITAMN
                     GLLIAGTSGLALLLWSQGKVSVGAIALATGLAIRISNLSGWIMWVVNGIFEDVGTVQD
                     GITTIAQPRAVQDGKAAPALAITHGAVRFDHVRFHYGHHGRVIDDLDLVVRGGEKIGI
                     VGPSGAGKTTLMNLLLRLYDLESGRITIDGQDVSRVTQESLRAHVGVVTQDTSLLHRS
                     IRDNILYGRPDADDAAIMDAVRKARADSFIPGLSDNEGRTGFDALVGERGVKLSGGQR
                     QRIAIARVFLKDAPILVLDEATSALDSEVEAAIQDSLDALMHGKTVIAIAHRLSTIAR
                     MDRLVVLDQGRIVETGTHAELVAQGGLYARLWQRQTGGFVGVEDAR"
BASE COUNT          319 a          762 c          763 g          378 t
ORIGIN      
        1 agggcccgct tgcgggcgat gccctggctt cgatcggcat cagggcggaa gcatcgcccg
       61 cgaacgggcc cctgccgttt ttccccgcgc gccttgtcgc gcccgagtgc gcttccgcgg
      121 caggtgcctc gctgcgcagg aatgcgttcc cgccgatcgc gtcgatgcgg cttgcgccgc
      181 gttgcgcgag gccgcacgct ggtgcgcctt tctccatgat gtgacgccgt gatctttcgc
      241 tggttcgaat cgctgatcga tgccttcaag gagccgggcg agggcatgcc gccgacttcg
      301 gtcgggcgct tctacctgtt ctacctgcgc caggtgtggc cggtgttcgc ggcgacggtg
      361 ttcgtcggtt tcttcgttgc cggcatcgag gtggcgctgt tcggtttcat cgggcgcgtg
      421 gtcgacctgg cgaaggagat cccggcgccg gggttcttcc ggcgccacgg gcacgagctg
      481 gggttcatgg cgttcgtggt cgtcgtcgcg cggccgttct tcaacgccgt gcacgatctc
      541 ctggtcaacc aggcgatcac gccgaacctc accaaccgca tccgctggca gaaccaccgc
      601 tacgtgatcc gccagagcct cgcgttcttc cagaacgact atgccggccg catcgccaac
      661 cgcatcatgc agaccggcac cgcgctgcgg cagtcggcgg tgcagatcgt cgacgcgctg
      721 tggtacgtga tcgtctacgt cggcagtgcc gtggcgttgt tcgcgcacga ggattggcgc
      781 ctcgcgctgc cgctggtcgg ctgggtggtg ctgtatgtcg ccgcactggc ggttttcatc
      841 ccgcgcctca agcagcgctc gtggcgtgcg tcggcggccg gctccaagct gatggggcgc
      901 gtggtggacg gctacagcaa cgtgctcacg ctgaaactgt tcgcccatgg ccggcgcgag
      961 gaggcctacg tggccgacgc gatggccgag cagaccacga agatcgcgcg catgacgcgc
     1021 gtcaccaccg cgctcgacgc cagcatcacc gcgatgaacg ggctgctgat cgccggcact
     1081 tccggcctcg cgctgctgct gtggagccag ggcaaggtca gcgtcggcgc gatcgcgctc
     1141 gcgaccgggc tggcgatccg catcagcaac ctgtccggct ggatcatgtg ggtggtcaac
     1201 ggcatcttcg aggatgtcgg caccgtgcag gacggcatca ccaccatcgc ccagccgcgc
     1261 gccgtgcagg atggcaaggc cgcgccggcg ctcgcgatca cccacggcgc ggtgcgcttc
     1321 gaccacgtgc gcttccacta cggccaccac ggccgcgtca tcgacgatct cgatctcgtc
     1381 gtgcgcggcg gcgagaagat cggcatcgtc ggcccgtcgg gcgccggcaa gaccacgctg
     1441 atgaacctgc tgctgcgcct gtacgacctc gaatcggggc gcatcacgat cgacggccag
     1501 gacgtctcgc gcgtgaccca ggagagcctg cgcgcgcatg tgggcgtggt cacccaggac
     1561 acctcgctgc tgcatcgctc gatccgcgac aacatcctct acggtcgccc cgatgcggac
     1621 gatgcggcga tcatggacgc cgtgcgtaag gcgcgcgccg acagcttcat cccgggtctc
     1681 agcgacaacg aaggccgcac cggcttcgac gcgctggtcg gcgagcgcgg cgtgaagctc
     1741 tccggcggcc agcgccagcg catcgccatt gcgcgcgtgt tcctcaagga cgcgccgatc
     1801 ctcgtgctgg acgaagccac cagcgcgctc gactccgaag tcgaagccgc gatccaggac
     1861 agcctggatg cgctgatgca cggcaagacg gtcatcgcca tcgcgcaccg gctctccacc
     1921 atcgcccgca tggaccgcct cgtcgtgctc gaccagggcc gcatcgtcga aaccggcacg
     1981 cacgccgagc tggtcgcgca aggcgggctc tacgcgcggc tgtggcagcg gcagacgggt
     2041 gggtttgtag gcgtggaaga cgcgcggtag tgctgttgct tgcccgcgcc gtgaggcgcg
     2101 ggtggaagca gtcatgccgg ttggctttcg ggaaaacccg acgcggcgcg cagcagtcgg
     2161 ccattcgcct gtggagcgcg cgttgacgga caagaccccc ctggtgccga ccggtcgtgt
     2221 cg
//
LOCUS       DASSVL010000212         2121 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_725517, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000212 DASSVL010000000
VERSION     DASSVL010000212.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2121)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2121)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2121
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_725517"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1185)
                     /locus_tag="VFM52_03620"
     CDS             complement(<1..1185)
                     /locus_tag="VFM52_03620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8764288.1"
                     /translation="MAVAYAIAAWLLVQIATQVFPFFNIPNWVVRVVVLLLVLGFPVV
                     AALAWVYEVTPEGIRRTEPAGSPEARPAHEHRSVGQKLNAIIVTVLVLAVAVTSWRLY
                     IVRHESNAAATAVPAMGSPDEAQRNPGTAGVQPAQAIPAKSIAVLPFENLSTDKTNAY
                     FADGMQDLILTKLADVGDLKVISRTSTMQYGSRPQNLKQIGQQLGVATILEGSVQKAA
                     NEVLINVQLINARTDGHIWAQSYTRTLDNIFGVEGEVATQIAGTLSAKLSPAQSAQLT
                     AVPTRNPAAYDAFLRAEYQANKGLINYDTASWKAALPLYHEAVQADPDFALAWARLSF
                     NESQLAWFGGGGQNVKQLNQQARADAEQALKLAADLAASQLAIGFTEYWGRQDYDAAL
                     KAF"
     gene            complement(1368..>2121)
                     /locus_tag="VFM52_03625"
     CDS             complement(1368..>2121)
                     /locus_tag="VFM52_03625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007510771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="homoserine dehydrogenase"
                     /protein_id="HET8764289.1"
                     /translation="WHPEWLARGCHVVTANKALAGGHLSGWRALQAGRARGTGYGDSA
                     TVGAGLPALATLRRLHACGDKVTRIEGVFSGSFSYLFNHYDARQAFSTLLREACALGY
                     TEPDPRADLSGEDVARKLLILARAAGIPLQRSDVEVENLVPEKLRDVPRPEFLDRLDE
                     LDGPIAARHAAAVSRDCVLRYLARFDAGGTARVGLVEVPPGHPATHLQGADNLFAFTT
                     SRYAQRPLVIQGAGAGPEVTAQALLGDILALA"
BASE COUNT          350 a          720 c          707 g          344 t
ORIGIN      
        1 aaaagctttc aatgcggcgt cgtagtcctg gcgaccccag tactcagtga aaccgatcgc
       61 gagttgcgaa gcagcaagat ccgccgccag cttcaaagcc tgttcggcat cggcgcgcgc
      121 ctgctggttc agttgcttga cgttctgccc gccgccgccg aaccaggcga gctggctttc
      181 gttgaacgac aagcgcgccc acgccagggc gaaatccgga tcggcctgga ccgcctcgtg
      241 gtacaacggg agcgccgcct tccagcttgc ggtgtcgtaa ttgatcagtc ctttgttggc
      301 ctgatactcg gcacgcagga acgcatcgta ggccgccggg ttccgggtgg gcacggcggt
      361 caactgcgcc gactgggccg gcgagagttt cgcgctcagg gtgccggcga tctgcgtcgc
      421 cacctcgccc tcgacgccga agatgttgtc cagcgtgcgc gtgtaggact gcgcccagat
      481 gtgcccatcg gtgcgggcgt tgatcaactg cacgttgatc agcacctcgt tggccgcctt
      541 ctgcacgctg ccctcgagga tggtcgcaac gccgagctgc tgcccgatct gcttcaggtt
      601 ctggggacgg ctgccgtact gcatcgtcga ggtgcgcgag atcaccttca ggtcaccgac
      661 gtcggcgagc ttggtgagga tcaggtcctg catgccatcg gcgaaatagg cgttggtctt
      721 gtcggtcgaa agattttcga acggcagcac cgcgatggat ttggcgggaa tcgcttgcgc
      781 cggctgcacg ccggcggttc ccggattgcg ctgcgcttca tccgggctgc ccattgcagg
      841 cacggccgtc gccgcggcgt tgctttcgtg ccgcacgatg tacaagcgcc agctggtgac
      901 cgcgaccgcc agcaccagca cggtgacgat gattgcgttg agcttctgcc cgaccgagcg
      961 atgttcgtgc gcggggcgcg cttccggcga accggccggc tcggtgcggc ggatgccctc
     1021 cggcgtcacc tcgtacaccc acgccaatgc agctacaacg gggaatccca ataccagcag
     1081 cagcacgacg acgcgcacca cccaattggg aatgttgaag aacgggaaga cttgcgtggc
     1141 gatctgcacc agcagccagg ccgcgatcgc gtaagcgacg gccacccgcc acacgtgacg
     1201 ccgcttcagc tcttcgaaaa ggccgcgacc gtccgccacc tggtgcccca cgggtcccgc
     1261 cggcaacagg ccggcctccg acggcggcga gtgtatcgcc gttcaaggcc acggggtgga
     1321 ttcggcgtgg ccgcctgcgc agcgcatcga ggaaccgccc cgcacggtca agccaatgcc
     1381 aggatgtctc ccaacagcgc ctgcgccgtg acttccggcc ccgcgcccgc gccctggatc
     1441 accagcgggc gttgcgcgta gcgcgacgtg gtgaaggcga acaggttgtc cgcaccctgc
     1501 aggtgtgtcg ccgggtgacc gggcggcact tcgaccaggc cgacgcgcgc ggtgccgccg
     1561 gcgtcgaagc gcgcgaggta gcgcagcacg caatcgcgcg aaacggcagc ggcatggcgt
     1621 gccgcgatcg gcccatcgag ttcatcgagg cgatccagga attcgggccg cggtacgtcg
     1681 cgcaattttt ccggcaccag gttttcgact tcgacatcgc tgcgctgcaa cggaatgccc
     1741 gcggcgcgcg cgaggatcag cagcttgcgc gcgacgtcct cgccggaaag atcggcacgc
     1801 ggatcgggtt cggtgtagcc gagcgcgcac gcctcgcgca gcagcgtcga gaacgcctgc
     1861 cgcgcgtcgt agtggttgaa caggtacgag aacgaacccg agaacacgcc ctcgatgcgc
     1921 gtgactttgt cgccacaggc gtgcagccgg cgcaaggtgg ccagcgccgg caagcccgcg
     1981 ccgacggtgg cgctgtcgcc gtaaccggtg ccacgcgcgc gccctgcctg caaggcgcgc
     2041 cacccggaga ggtggccgcc cgccagcgcc ttgttcgcgg tcaccacgtg gcaaccacgc
     2101 gccagccatt ccggatgcca t
//
LOCUS       DASSVL010000213         2446 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_245121, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000213 DASSVL010000000
VERSION     DASSVL010000213.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2446)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2446)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2446
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_245121"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1270
                     /locus_tag="VFM52_03630"
     CDS             <1..1270
                     /locus_tag="VFM52_03630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008212854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glycoside hydrolase family 2 protein"
                     /protein_id="HET8764290.1"
                     /translation="RDHPSIVLWAGNNEVETAWESWGTSLDFQKAQGKTESARVEQGM
                     RELFDHTLRDVVASQSPGTPYWPSTPSSDYDTKANVLDDGDYHYWDVWSGKALPPSAY
                     LDVTPRFQSEYGLQSFPSMATLRSALEPSDLSIDSPVLRAHQKYDKGKGNQRLLMYVE
                     RGYGKPKNFAALVYLSQVMQAEGIQLAAEHLRASRPQSMGSLYWQLNDVWPGVTWSSV
                     DYDGRWKALQYHAKRFYAPLRVVAIRKDGKTHVSLVSDRTAPLDAELRVRMLGMDGKP
                     LWEHAQPVHVAALASTPAGDYTDAQLLHGADPRRTVAVFELLDHGKPVSRHLLYFDDA
                     KHLALPDPGLKAQLSADGRSLTVSARRLAREVWVDFGDTDPDARLSDNAFDLLPGESV
                     ILHVDSTADAAALRRALTIRSLYGATVTTP"
     gene            1273..>2446
                     /locus_tag="VFM52_03635"
     CDS             1273..>2446
                     /locus_tag="VFM52_03635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005918986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 125 protein"
                     /protein_id="HET8764291.1"
                     /translation="MHAFSRRDVLKLIGSSAAALALPRLALAGTASALPSRRPPPARR
                     KFSSPVVEAEIARVQAKIGDPELAWMFGNCYPNTLDTTVQMDTLHGKPDTFVITGDID
                     AMWLRDSSAQVWPYLPLAAKDASLRRLYRGLIRRQALCISIDPYANAFLPDPRGKTTL
                     DWAQHDLTDMKPGVAERKWEIDSLCWTIRIAHGYWKATGDRAPFDDDWRAAMHLVLAT
                     FRAQQRKHGPGPYHFQRASAIPTDTVPLGGYGNPAQPVGLIYSMFRPSDDACIYPLFV
                     PANAFAVVSLRQLAEMSRALHGDAAFAADCEALAAEVQAALERHAVMTEAGADFWAYE
                     VDGYGNQLFMDDANVPSLLALPYLGFCARDDARYRRTRARAWGERNPYFFRGKAAEG"
BASE COUNT          392 a          849 c          834 g          371 t
ORIGIN      
        1 gcgcgaccac ccgtccatcg tgctgtgggc cggcaacaac gaggtcgaga cggcgtggga
       61 atcgtggggc accagcctgg atttccagaa ggcgcagggc aagaccgaga gcgcgcgcgt
      121 cgaacagggc atgcgcgagc tgttcgacca cacgctgcgc gacgtggtcg cgtcgcagtc
      181 gcccgggacg ccgtactggc cgagcacgcc gagcagcgac tacgacacca aggccaacgt
      241 gctggacgat ggcgactacc actactggga cgtgtggtcg ggcaaggcgc tgccgccgag
      301 cgcctatctc gacgtcacgc cgcgcttcca gtccgaatac ggcctgcagt ctttcccgtc
      361 gatggcgacg ctgcgcagtg cgctcgagcc gtccgacctc tccattgact cgccggtgct
      421 gcgcgcgcac cagaagtacg acaagggcaa gggcaaccag cgcctgctga tgtacgtgga
      481 gcgcggctac ggcaagccga agaacttcgc cgcgctggtg tacctcagcc aggtgatgca
      541 ggccgagggt attcagctgg ctgccgagca cctgcgcgcc tcacgcccgc agagcatggg
      601 ctcgctgtac tggcagctca acgacgtgtg gcccggcgtc acctggtcga gcgtggacta
      661 cgacggccgc tggaaggcgc tgcagtatca cgccaagcgt ttctacgcgc cgctgcgcgt
      721 ggtggccatc cgcaaggacg gcaagaccca cgtgtcgctg gtgtccgacc gcaccgcgcc
      781 gctcgatgcc gagctgcgcg tgcgcatgct cggcatggat ggcaagccgt tgtgggagca
      841 cgcccagccc gtgcacgtgg cggcgctggc cagcacgccg gccggcgact acacggatgc
      901 acaactgcta catggcgccg atccgcgccg cacggtggcg gtgttcgaat tgctcgacca
      961 cggcaagccg gtctcgcgcc acctgctgta cttcgacgac gcgaagcacc tggcgctgcc
     1021 cgatcccggc ctgaaggcgc agctttctgc cgatggacgc agcctcacgg tgagcgccag
     1081 gcgtcttgcg cgcgaagtgt gggtggattt cggcgacacc gatccggatg cgcgcctgtc
     1141 cgacaacgcg ttcgacctgc tgcccggcga gtcggtgatc ttgcacgtcg acagcaccgc
     1201 cgatgcggcg gcgctgcggc gtgccctgac gatacgcagc ctgtacggcg ccacggtgac
     1261 cacgccatga ccatgcatgc cttttcccgc cgcgacgtgc tcaagctgat cggcagcagt
     1321 gccgccgcgc tggccctgcc gcgcctggcg ctggccggca cggcgtcagc gttgcccagc
     1381 cggcgcccgc cgccggccag gcgcaagttc agcagcccgg tggtggaggc ggaaattgcc
     1441 cgcgtgcagg cgaagatcgg cgaccccgaa ctggcgtgga tgttcggcaa ctgctacccg
     1501 aacacgctgg ataccacggt gcagatggac accctgcacg gcaagccgga caccttcgtc
     1561 atcaccggcg acatcgacgc gatgtggctg cgtgactcct ccgcgcaggt gtggccgtac
     1621 ctgccgctgg ccgcgaagga tgcgtcgctg cgccggctgt accgcggcct gatccgccgc
     1681 caggcgctgt gcatttcgat tgacccgtac gcgaatgcct tcctgcctga tccgcgcggc
     1741 aagaccacgc tggactgggc gcagcacgat ctcaccgaca tgaagcccgg cgtggccgaa
     1801 cgcaaatggg agatcgactc gctgtgctgg acgatacgca tcgcccacgg ctactggaaa
     1861 gccaccggcg accgtgcacc gttcgacgac gactggcgcg ccgcgatgca cctggtgctg
     1921 gcgacgttcc gcgcgcagca gcgcaagcac gggccggggc cgtaccactt ccagcgcgcc
     1981 tccgcgatcc ccaccgacac cgtgccgctg ggcggctacg gcaatccggc gcagccggtg
     2041 gggctgatct actcgatgtt ccggccctcg gacgatgcat gcatctatcc gctgttcgtg
     2101 ccggccaatg cgtttgccgt ggtgtcgctg cgccagctgg cggagatgtc gcgcgcgctg
     2161 cacggcgacg cggcgttcgc cgccgactgc gaggcgctgg ctgccgaggt gcaggcggcg
     2221 ctggaaaggc atgccgtgat gaccgaggcc ggcgcggatt tctgggccta cgaggtcgac
     2281 ggctacggca accagctgtt catggacgac gccaacgtgc ccagcctgct ggccttgccc
     2341 tacctcggtt tctgcgcgcg cgacgacgcg cgttaccggc gcacccgcgc ccgggcatgg
     2401 ggcgaacgca acccgtactt cttccgcggc aaggcggcgg aaggga
//
LOCUS       DASSVL010000214         4421 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_725534, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000214 DASSVL010000000
VERSION     DASSVL010000214.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 4421)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4421)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4421
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_725534"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..767)
                     /locus_tag="VFM52_03640"
     CDS             complement(<1..767)
                     /locus_tag="VFM52_03640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017461062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate and iron-dependent oxygenase
                     domain-containing protein"
                     /protein_id="HET8764292.1"
                     /translation="MKSVPTLDIRRYETDRDAFVAELGSAYREFGFCCISGHGIPAAL
                     IDNAYEAFRRFFALPAETKMKYHVPGAGGARGYTPFKVETAKDSQYPDLKEFWHVGRE
                     LPGDSKFAALMPPNLWPAEVPEFRRHASELYQALDTLGTRVLRALALHIHLPEHYFDD
                     KTDQGNSILRPIHYPPITDGSVPNVRSGAHEDINFITLLVGASAEGLEVLTREGEWLP
                     ITTEGDAIVVNIGDMLQRLTNHVYPSTSHRVVNPQND"
     gene            complement(892..2238)
                     /gene="glmM"
                     /locus_tag="VFM52_03645"
     CDS             complement(892..2238)
                     /gene="glmM"
                     /locus_tag="VFM52_03645"
                     /EC_number="5.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007508193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0008966 - phosphoglucosamine mutase
                     activity [Evidence IEA];
                     GO_function: GO:0016868 - intramolecular
                     phosphotransferase activity [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglucosamine mutase"
                     /protein_id="HET8764293.1"
                     /translation="MAQRRYFGTDGIRGKVGVWPINAEFMLRLGRAAGAVLKRQGNAR
                     RGVLIGKDTRVSGYMFEAALEAGLVSAGVDVRLLGPIPTPAIAFLTRSLRAEAGIVIS
                     ASHNPHYDNGIKFFSAQGEKLSDEMEDAIEAEIDATFLTVPSEELGKATRINDATTRY
                     VEFCKATVPEDFNLSGMKIVLDCANGATYQVAPKVFAELGAEVIALGDKPDGFNINRN
                     IGSTHPETLQRTVVEQHADLGIAFDGDGDRVQMVDRNGVLADGDDLLFVIARAWKARG
                     LLKGPVVGTLMSNYGLELALQALDIPLVRAKVGDRYVLQQLKEHAGVLGGETSGHILC
                     LDRVTTGDGICSALATLEALGGADFTAARRDLHKLPQVMINVRADGARAALTDVAVRG
                     ALAATEATLRGRGRVVLRASGTEPLVRVTVEGADAGEVQRLAQNLADIVKSAAERS"
     gene            complement(2285..3199)
                     /gene="folP"
                     /locus_tag="VFM52_03650"
     CDS             complement(2285..3199)
                     /gene="folP"
                     /locus_tag="VFM52_03650"
                     /EC_number="2.5.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007508190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004156 - dihydropteroate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009396 - folic acid-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydropteroate synthase"
                     /protein_id="HET8764294.1"
                     /translation="MSTLDAMFAPTLDCAGRVLVFDRPRIAGIINVTPDSFSDGGMYA
                     DTAHAVEHGLQLAAEGADMLDVGGESTRPGAADVPVDEELRRVVPVIEALAKQTSLPI
                     AVDTSKPEVMQAAVAAGAGMVNDICALRRDGALDVTARLGVAVCLMHMQGEPRSMQAD
                     PHYDDVVGEVHRFLADRLLACELAGIDRRKVMVDPGFGFGKNLEHNLALLRALGRFAD
                     LGGGVYVGLSRKSMLGELTGRKVPAERVAASTAAALIAAQRGARLVRVHDVAATVDAL
                     AVWHGVHAGDAEPVRDTRPPAPRWPDED"
     gene            complement(3196..3762)
                     /gene="orn"
                     /locus_tag="VFM52_03655"
     CDS             complement(3196..3762)
                     /gene="orn"
                     /locus_tag="VFM52_03655"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007081889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000175 - 3'-5'-RNA exonuclease activity
                     [Evidence IEA];
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oligoribonuclease"
                     /protein_id="HET8764295.1"
                     /translation="MSQVNDDNLIWIDLEMTGLDTDRDSILEIATIVTDKELTVLAEG
                     PVFAMRHALDQLEAMDSWNRNQHGKSGLWQRVLASATDHADAEAATLEFLHQWVPAGK
                     SPMCGNSICQDRRFLHRQMPRLERFFHYRNLDVSTLKELARRWVPEIAKGFGKESAHT
                     ALSDIHDSIAELRYYRHFMGPLGGQDHP"
     gene            3816..>4421
                     /gene="sbcB"
                     /locus_tag="VFM52_03660"
     CDS             3816..>4421
                     /gene="sbcB"
                     /locus_tag="VFM52_03660"
                     /EC_number="3.1.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007508186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000175 - 3'-5'-RNA exonuclease activity
                     [Evidence IEA];
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0008310 - single-stranded DNA 3'-5' DNA
                     exonuclease activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease I"
                     /protein_id="HET8764296.1"
                     /translation="MQTLFWHDYETFGADPRRDRPVQFAGIRTTLDLEIVGTPVMVFA
                     QPPRDCLPHPEACLITGITPQQAEREGVVEVDFAAQVHEALAPPGTCGVGYNSLRFDD
                     EVTRQLLYRNFFEPYAREWDHGNSRWDLIDLVRMCEALRPEGIAWPLRDDGSPSFKLE
                     HLARANHLQQEHAHDALSDVHALIDLARLLRTRQPKLWDWHY"
BASE COUNT          683 a         1510 c         1502 g          726 t
ORIGIN      
        1 ttgtcgttct gcgggttcac cacgcggtgg ctggtggacg gatacacgtg gttggtcagg
       61 cgctgcagca tgtcgccgat gttcaccacg atggcatcgc cctcggtggt gatcggcagc
      121 cactcgccct cgcgagtgag cacttccaag ccttcggcgc tggcgcccac cagcagggtg
      181 atgaagttga tgtcctcgtg cgccccggag cgtacgttgg gcacgctgcc gtcggtgatc
      241 ggcgggtaat ggatcggacg caggatcgag ttgccctggt cggtcttgtc gtcgaagtag
      301 tgttccggca ggtggatgtg cagcgccagt gcgcgcagca cgcgggtgcc cagcgtatcc
      361 agcgcctggt acagctcgct cgcgtggcgg cggaactccg gcacctcggc cggccacagg
      421 ttcggcggca tcagcgcggc gaacttcgag tcgccgggca gctcgcgacc gacgtgccag
      481 aactccttca agtcggggta ttggctgtcc ttcgccgtct ccaccttgaa cggcgtgtag
      541 ccacgcgcgc cgccggcacc gggcacgtgg tacttcatct tggtttccgc cggcagggca
      601 aagaaccggc ggaacgcctc gtaggcgttg tcgatcagcg cggcgggaat gccgtgtccg
      661 ctgatgcagc agaaaccgaa ctcgcggtag gccgaaccca gttccgcgac gaaggcgtcg
      721 cggtcggttt cgtaacggcg gatgtcgagg gtgggaacgc ttttcatgga tggtgtccgt
      781 gcaggcctgc ggtcgatggg tgtcccgcca ccgcaggggc gggtcacgtc gggccattcc
      841 agggcgaccg gatccagagg agcctgagca aggcgcgcgg cgcttgccgg ttcacgagcg
      901 ttcggctgcg gattttacga tgtcggcgag gttctgcgcc aaccgctgca cctcgccggc
      961 atcggcgcct tccaccgtga cgcgcaccag cggctcggtg ccggacgcgc gcagcaccac
     1021 gcggccacgg ccgcgcaacg tggcctcggt cgccgccagc gcgccgcgta cggcgacgtc
     1081 ggtgagcgcc gcgcgggcgc catcggcgcg cacgttgatc atcacctgcg gcagcttgtg
     1141 cagatcccga cgggccgcgg tgaaatccgc gccgccgagc gcttcgagcg tagccagtgc
     1201 cgaacagatg ccgtcgccgg tggtgacgcg atcaaggcac aggatgtggc cggaggtttc
     1261 gccgccgagg acgcccgcgt gctccttgag ctgctgcagg acgtagcggt cgccgacctt
     1321 ggcacgcacc agcggaatgt ccagcgcctg caacgcgagc tcgagcccgt agttgctcat
     1381 caaggtgccg acgaccggcc ccttcagcag gccgcgcgcc ttccacgcgc gggcaatgac
     1441 gaacagcagg tcgtcgccgt cggcaagcac gccattgcga tccaccatct gcacgcgatc
     1501 gccgtcgccg tcgaaggcga tgccgaggtc ggcatgctgc tcgaccacgg tgcgctgcag
     1561 ggtttccggg tgggtcgagc cgatgttgcg gttgatgttg aagccgtccg gcttgtcgcc
     1621 gagcgcaatc acttcggcac cgagctcggc gaacaccttg ggcgcgacct ggtacgtcgc
     1681 gccgttcgcg caatcgagca cgatcttcat gccggaaagg ttgaaatcct ccggcacggt
     1741 cgccttgcag aactcgacgt agcgggtggt ggcgtcgttg atgcgcgtgg ccttgccgag
     1801 ctcctcggaa ggcacggtga ggaacgtggc atcgatctcg gcctcgatcg cgtcctccat
     1861 ctcgtcgctg agcttctcgc cctgcgccga gaagaacttg atgccgttgt cgtagtgcgg
     1921 gttgtgcgag gcgctgatga cgatgccggc ctcggcgcgc agcgagcggg tgaggaaggc
     1981 gattgccggc gtcgggatcg gtccgagcag gcgcacgtcg acgccggccg acaccaggcc
     2041 ggcttccagc gcagcctcga acatgtagcc ggaaacccgg gtgtccttgc cgatcagcac
     2101 gccgcgccgc gcgttgccct ggcgcttgag caccgcgccg gcggcacgcc cgaggcgcag
     2161 catgaactcg gcgttgatcg gccatacgcc gaccttgccg cggatgccgt cggtgccgaa
     2221 atacctgcgc tgcgccatat gccgcctctc cagatgaatg ccctgcccgc gcggttggtt
     2281 ccgctcaatc ctcgtctggc cagcgcggcg ccggcgggcg cgtgtcgcgc accggttccg
     2341 cgtcgccggc atgcacgccg tgccacaccg ccagcgcgtc gacggtggcg gcgacgtcgt
     2401 gcacgcgcac caggcgcgcg ccgcgctgcg cggcgatcag ggccgccgcg gtcgatgccg
     2461 cgacgcgttc ggccggcacc ttgcggccag tcagctcgcc cagcatcgac ttgcgcgaca
     2521 ggcccacgta cacgccgccg ccgaggtcgg caaaacgccc gagcgcgcgc agcaaggcga
     2581 gattgtgttc gaggttcttg ccgaagccaa agcccggatc gaccatcacc ttgcgacggt
     2641 cgatgccggc cagctcgcag gccagcaggc ggtcggcgag gaagcggtgc acttcgccga
     2701 ccacatcgtc gtagtgcgga tcggcctgca tgctgcgcgg ctcgccctgc atgtgcatca
     2761 ggcacaccgc gacgccgagg cgcgcggtca cgtcgagcgc gccgtcgcga cgcaacgcac
     2821 agatgtcgtt caccatgcca gcgccggcag ccaccgccgc ctgcatcact tccggcttgg
     2881 aagtgtcgac cgcgatcggc aggctggtct gcttcgccag cgcctcgatc accggaacca
     2941 cccggcgcag ctcttcgtcc accggcacgt ccgccgcacc ggggcgggtg gattcaccgc
     3001 cgacatcgag catgtcggcg ccttcggcgg cgagctgcaa gccatgctcg acggcatgcg
     3061 ccgtatccgc atacatcccg ccatcggaga acgaatccgg ggtgacgttg atgatgccgg
     3121 cgatgcgcgg acggtcgaac accagcacgc ggccggcaca atccagcgtc ggcgcgaaca
     3181 tcgcgtccag cgtgctcatg ggtgatcctg gccgcccagc gggcccatga agtggcggta
     3241 atagcgcagc tccgcgatcg aatcgtggat gtcggacagc gcggtgtgcg ccgactcctt
     3301 gccgaagccc ttggcgatct ccggcaccca gcgccgggcc agctccttga gcgtggagac
     3361 gtccaggtta cggtagtgga agaagcgttc gagccgcggc atctgccggt gcaggaagcg
     3421 tcggtcctgg cagatcgagt tgccgcacat cggcgacttg ccggccggca cccactggtg
     3481 caggaattcc agcgtcgccg cctcggcgtc ggcatggtcg gtggcggatg ccagcacgcg
     3541 ctgccacagg ccggacttgc cgtgctggtt gcggttccag ctgtccatcg cctccagctg
     3601 gtccagcgcg tggcgcatgg cgaacaccgg gccttccgcc agcaccgtca actccttgtc
     3661 ggtgacgatg gtggcgatct ccaggatcga atcacgatcg gtatcgaggc cagtcatctc
     3721 cagatcgatc cagatcaggt tgtcgtcgtt cacttggctc atgatcgctc cttggaaggg
     3781 cgcagtttac cagccccgca tgcgatcatc gcccgatgca aaccctcttc tggcacgact
     3841 acgagacctt cggcgccgac ccgcggcgcg atcgtccggt gcagtttgcc ggcatccgca
     3901 ccacgctcga cctggagatc gtcggcacgc cggtgatggt gttcgcgcag ccgccacgcg
     3961 actgcctgcc gcacccggag gcttgcctca tcaccggcat cacgccgcaa caggccgagc
     4021 gcgagggtgt cgtcgaagtc gacttcgcgg cgcaggtcca cgaggcgctc gcaccgccgg
     4081 gcacctgcgg cgtgggctac aactcgctgc gcttcgacga cgaggtgacg cgccagctgc
     4141 tgtaccgcaa ttttttcgag ccgtacgcgc gcgagtggga ccacggcaat tcgcgctggg
     4201 acctgatcga cctggtgcgc atgtgcgagg cgctgcgccc ggaaggcatc gcctggccgc
     4261 tgcgcgacga cggcagcccg agcttcaagc tcgaacacct cgcgcgcgcc aaccacctgc
     4321 agcaggagca cgcgcacgat gcgctttccg acgtgcacgc gctgatcgac ctcgcgcgcc
     4381 tgcttcgcac gcgccagccg aaactgtggg attggcatta c
//
LOCUS       DASSVL010000215         3370 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_400469, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000215 DASSVL010000000
VERSION     DASSVL010000215.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3370)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3370)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3370
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_400469"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..612)
                     /locus_tag="VFM52_03665"
     CDS             complement(<1..612)
                     /locus_tag="VFM52_03665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010485695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_function: GO:0016773 - phosphotransferase activity,
                     alcohol group as acceptor [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FGGY family carbohydrate kinase"
                     /protein_id="HET8764297.1"
                     /translation="MSQVAGLDLGTQSVKLLVYDPAARRRVALHSRHLALSSGEDGTR
                     EQLAADWVDAIRACFAELEPKLRAGIAAIGVSGQQHGFVPLDADGRVLAPVKLWCDTS
                     SQRECAEITAAAGGEQACIDLAGNPVLVGYTASKLPWTRRHRPDAYAALAGIALPHDY
                     VNFWLTGERWMECGDASGTGWLDVRTRRWSAPMLAATDAQRDLA"
     gene            946..2115
                     /locus_tag="VFM52_03670"
     CDS             946..2115
                     /locus_tag="VFM52_03670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007080280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator"
                     /protein_id="HET8764298.1"
                     /translation="MSSPHRIALLFNANKVYDRQVIAGIGQYLKSTRVEWDLFMEEDF
                     RCRTLGIHHWRGDGIIADFDDPAVAETLADMPLPVVAVGGSYANEAQYPVHTPYVATD
                     NAKLVRLAYDHLIEQGLQRFAFYGLPPTPGNRWAQEREDAFCRMLAADHMEGLVYRGS
                     PTSAGGWGRAQKAMADWVLALPKPIGIIAVTDARARQLLQSCVVADVPVPEQIAVVGI
                     DNDPIAQILGRIALTSVIQGAEGMGHAAAQLLHKMLHGQVAPNTRIVVPPVGINVQAS
                     SLHQPVKSPHVMRARHYIRQYACLGIKADQVADYVGISRTLLEEHFKRELRQTVHQAI
                     MTHKLTIARGLLADTAVPLADVAVPSGFTSLQYMYAVFRREFNCTPRQYVKRSLS"
     gene            complement(2126..3256)
                     /locus_tag="VFM52_03675"
     CDS             complement(2126..3256)
                     /locus_tag="VFM52_03675"
                     /inference="COORDINATES: protein motif:HMM:NF012863.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SGNH/GDSL hydrolase family protein"
                     /protein_id="HET8764299.1"
                     /translation="MAAWTAAPDTVGPVLDGQTVRQVVRTSVAGTQLRIRLSNLFGAT
                     AVTLGPVRVARSAGGADTVPGTDHALLFGGKPTVTIAKGESVLSDPVPMDIAALQELA
                     VSLYVPAAAAYHPATVHNAGMATAYITEKGDATAAAHFPREETSGARFYLAGVEVAGA
                     ATRATLVAFGDSITDGVGSRPDANERWPDYLAARLQADPKLAHIGVADEGIGGNRILH
                     DNYGPSALNRFDRDVLDQPNVRWVVLLEGINDIGGSGYAWDAKDKVSAQQLIDGMKAL
                     VARAHARHVKVYGATLTPYGGNGWPYHSVAGEQTREAVNAWIRHSGVFDGVVDFDQAV
                     RDPAAPKKLLPAYDSGDHLHPNSAGYRAMADAVDLRLFAGQR"
BASE COUNT          512 a         1202 c         1129 g          527 t
ORIGIN      
        1 ggcgagatcg cgctgcgcgt cggtcgcggc cagcatcggc gcggaccatc gccgcgtgcg
       61 cacgtcgagc cagccggtgc ccgaggcgtc gccgcattcc atccaccgtt cgccggtcag
      121 ccagaagttc acgtagtcgt ggggcaacgc gatgccggcc agcgcggcgt acgcatcggg
      181 gcgatggcgc cgggtccacg gcagcttcga cgcggtatag ccgaccagca ccgggttgcc
      241 ggccaggtcg atgcaagcct gttcgccgcc ggcggcggcg gtgatctccg cacactcgcg
      301 ctggctgctg gtgtcgcacc acaacttgac cggcgccagc acgcgtccat ccgcatccag
      361 cggcacgaag ccgtgttgct ggccggagac gccgatcgct gcgatgccgg cgcgcagctt
      421 cggttccagc tcggcaaagc acgcgcggat ggcgtcgacc cagtccgccg caagctgttc
      481 gcgcgtgccg tcctcgccac tgctcagcgc caggtggcgg ctgtgcagcg cgacacggcg
      541 gcgcgcggcc gggtcgtaga ccagcagctt gacgctctgg gtgcccaggt cgaggccggc
      601 cacctggctc acgcggcagc ctcaaggcga ccgtcgaatg ccgcatccgc aaaccggcat
      661 gcctggcggc aggcactcga tggtggcagc gacgtttcca tgcaggcgtg atctcccctt
      721 gcgatgcgag ccgatggcgc agcacacgcg cgcagtggaa tcgatcgacc gcgcgtctcg
      781 tgatgcactt cgatgctgca tgccggccgc cagccgtcgc aattgcgaaa tccaccagtg
      841 cggcactttt ttttgcctgc cgcgtcgcgt catgtccgcc ggcgtcgaaa ctgttagcgt
      901 ctagactgca tggacggcca atcgacaagc tgacaccggt gtgccatgtc atcacctcat
      961 cgcattgcgt tgctgttcaa cgcgaacaag gtctatgacc ggcaggtcat cgcgggcata
     1021 ggccagtacc tgaaatccac gcgcgtggag tgggacctct tcatggagga ggatttccgc
     1081 tgccgcacgc tcggcatcca ccactggcgc ggcgacggca tcattgccga cttcgacgac
     1141 ccggccgtcg cggaaaccct ggccgacatg ccgctgccgg tggtcgcggt cggcggctcc
     1201 tacgccaacg aagcgcaata tccggtgcac acgccctacg tggcgaccga caacgcgaag
     1261 ctggtgcgcc tcgcctacga ccacctgatc gaacaaggct tgcagcgctt cgccttctac
     1321 ggcttgccgc ccacgcccgg caaccgctgg gcacaggagc gcgaggacgc gttctgccgc
     1381 atgctggcgg ccgaccacat ggaggggctg gtctaccgcg gctcgccaac cagcgccggc
     1441 ggctgggggc gcgcgcagaa ggcaatggcc gactgggtgc tcgccctgcc caagccgatc
     1501 ggcatcattg cggtgaccga cgcccgcgcc cgccagctgc tgcaatcctg cgtggtggcg
     1561 gatgtgccgg tgcccgagca gatcgcggtg gtcggcatcg acaatgaccc gatcgcgcag
     1621 atcctcggcc gcatcgcgtt gacctcggtg atccagggcg ccgagggcat gggccacgcg
     1681 gcggcccagc tgctgcacaa gatgctgcac ggccaggtgg cgccgaatac gcgcatcgtc
     1741 gtgccgccgg tcggcatcaa cgtgcaggcc agcagcctgc accagccggt gaagagcccg
     1801 cacgtgatgc gcgcacggca ctacatccgg cagtacgcct gcctcggcat caaggccgac
     1861 caggtcgccg attacgtcgg catctcgcgc accctgctcg aagagcactt caagcgcgag
     1921 ctgcgccaga ccgtgcacca ggcgatcatg acgcacaagc tgacgatcgc ccgcggactg
     1981 ctggccgaca ccgcggtgcc gctcgccgac gtcgccgtac ccagcggctt cacctcgctg
     2041 cagtacatgt atgcggtgtt ccgccgcgag ttcaactgca ccccgcggca gtacgtgaag
     2101 cgctcgctgt cgtgacccgc cgcgctcagc gctggcccgc aaacaggcgc agatccaccg
     2161 catcggccat cgcgcggtag cccgcgctgt tcgggtgcag gtggtcgccg ctgtcgtacg
     2221 caggcagcag tttcttcggc gcggcgggat cgcgcacggc ctggtcgaaa tccaccacgc
     2281 cgtcgaacac gccggagtgg cgtatccacg cgttgaccgc ctcgcgggtc tgttcgccgg
     2341 caacgctgtg atacggccag ccattgccgc cgtacggcgt cagcgtcgcg ccgtagacct
     2401 tgacgtgccg cgcgtgcgca cgtgccacca gcgctttcat gccgtcgatc agctgctgcg
     2461 ccgacacctt gtccttggcg tcccacgcat accccgagcc gccgatgtcg ttgatgcctt
     2521 ccagcagcac gacccagcgc acgttcggct ggtcgagcac gtcgcgatcg aagcggttca
     2581 acgcgctggg gccgtagttg tcgtgcagga tgcggttgcc gccgatgccc tcgtcggcga
     2641 cgccgatgtg tgccagcttc ggatcggcct gcaggcgtgc tgcgaggtag tccggccagc
     2701 gctcgttcgc atccggcctg gagcccacgc cgtcggtgat ggagtcgccg aaggcgacca
     2761 gcgtggcgcg ggtcgcggca ccggccacct cgaccccggc gagatagaac cgggcgccgc
     2821 tggtttcctc gcgcggaaaa tgcgcggcag cggtggcgtc gcccttttcg gtgatgtacg
     2881 cggtggccat gccggcgttg tgcacggtcg ccgggtgata cgccgcggca gccggcacgt
     2941 agaggctcac cgccagctcc tgcaacgctg cgatgtccat cggcaccgga tcgctgagca
     3001 cgctttcgcc cttggcgatg gtcaccgtcg gcttgccgcc gaacagcagc gcgtggtcgg
     3061 tgccgggcac ggtatccgcc ccgccggcgc tgcgcgccac gcgtaccggc cccagcgtga
     3121 ccgcggtggc gccgaacagg ttggacaggc ggatgcgcag ctgcgtgccg gccacgctgg
     3181 tgcgcacgac ctggcgcacg gtctgcccgt ccagcaccgg gccgacggta tccggcgccg
     3241 cggtccaggc ggccacccac gcgggctgcc tatcggcacc gcccgcccaa gcgcccagcg
     3301 ccgtcaggca cagtgcgccg gcggctaccc atgcaagttt gcgtcgaagt tggtgcatgt
     3361 cgtctgacct
//
LOCUS       DASSVL010000216         2959 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_117718, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000216 DASSVL010000000
VERSION     DASSVL010000216.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2959)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2959)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2959
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_117718"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..436
                     /locus_tag="VFM52_03680"
     CDS             <1..436
                     /locus_tag="VFM52_03680"
                     /EC_number="2.1.1.67"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008212858.1"
                     /note="catalyzes the S-adenosylmethionine-dependent
                     transmethylation of thiopurine compounds; may be involved
                     in selenium cycling by forming dimethylselenide and/or
                     dimethyldiselenide; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="thiopurine S-methyltransferase"
                     /protein_id="HET8764300.1"
                     /translation="LGLLPERRVTPAGVHSSSGRIVIIQGDVFALDAATLADCVGVYD
                     RAAIVALPTDLRRRYAHEVYGKLPAGCRGLMVTLEYPQREMDGPPFSVEEGDVEALLG
                     HAWDTSVLDRRDLLASEPDFRARGLSAFHTAVYRLSRRSTSP"
     gene            542..2674
                     /gene="ovoA"
                     /locus_tag="VFM52_03685"
     CDS             542..2674
                     /gene="ovoA"
                     /locus_tag="VFM52_03685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008208957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-histidylcysteine sulfoxide synthase"
                     /protein_id="HET8764301.1"
                     /translation="MKLSVQADDSGTTTLPLAASPNLHESDPERLRKTLRDYFTSTFD
                     RYESLFETLATDAAYYEPSITLRHPLIFYFGHTATFFVNKLLLTHMIEERIDPHLESV
                     FAVGVDEMSWDDLDDAHYDWPSVADVRAYRNKVRALVTHLIDTAPLTLPLGWDNPWWA
                     IIMGVEHERIHVETSSVLIRQHQLKYVKPHPAWQPCHDTGPAPANALVKVEAGHVKLG
                     RDITSALYGWDNEYGHHEADVPAFEAARYMVSNQEFLAFVEAGGYTLAEYWDEEGNGW
                     RQFAKATHPTFWRRSAEGWKLRLMTEEVAMPWDWPVEVNYHEAKAFCRWKSARDGQPV
                     RLPTEDEWYRLYDESRHGDAAPDANINLAHWASSCPVNHFRQGDFYDVTGNAWQWTET
                     PIYPFEGFQVHPIYDDFTTPCFDGRHNLMKGGSWIATGNEAEPVSRYAFRRHFFQHAG
                     FRYVVSKNMKPAPASHYETDKLLSEYAEFHYGDTYFGVPNFSKALVDLALTKLGDAPR
                     RTALDLGCASGRATFELARHFEHVTGVDFSARFIGQGVALARGDSLRYLLQDEGELVE
                     YKSHSLAELGLADTAAKVEFWQGDACNLKPTFAEYDFVLAANLIDRLYNPTQFLEAIH
                     ERMNLGGLLMITSPYTWLAEHTPRPEWLGGFKKDGESFTTLNGLDAVLGKHFERLGEP
                     QAVPFVIRETRRKFQHTLSEVTFWRRRS"
BASE COUNT          510 a         1053 c          919 g          477 t
ORIGIN      
        1 gctcggcctg ctgccggagc gtcgggtcac gcccgccggc gtgcactcca gctcggggcg
       61 catcgtcatc atccagggcg acgtgttcgc gctcgatgcc gcaacgctcg cggattgtgt
      121 cggcgtctac gaccgtgcgg ccatcgtcgc cctgcccacc gacctgcgcc ggcgctatgc
      181 gcacgaggtg tacggcaagc tgccggccgg ctgccgcggc ctgatggtca ccctcgaata
      241 cccgcagcgc gaaatggacg gcccgccgtt ctcggtggag gagggcgacg tcgaggcgct
      301 gctcggccat gcctgggata ccagcgtgct cgaccggcgc gacctgctcg cctccgaacc
      361 cgacttccgc gcgcgcggcc tgagcgcgtt ccacaccgcg gtgtaccgcc tgtcgcgccg
      421 gtcgacgtcg ccgtgagcgt cccgtcttct tgccgccgcc ccgatccgct gcgctctgcg
      481 tgaacacgcg tgccagccgc tgcgcctatc cttgtttctt cacgatcgcg aggttcatgc
      541 cgtgaaactt tccgtccagg ctgatgattc cggtaccacc acgctcccgc ttgccgccag
      601 ccccaacttg catgagagcg accccgagcg cttgcgcaag acgttgcgcg actacttcac
      661 cagcaccttc gatcgctacg agtcgctgtt cgagacgctg gcgaccgatg ccgcctacta
      721 cgagccgtcg atcacgctgc gccacccgct gattttctac ttcggccaca ccgcgacgtt
      781 cttcgtcaac aagctgctgc tgacacacat gatcgaggag cgcatcgacc cgcacctcga
      841 atcggtgttt gccgtcggcg tggacgagat gagctgggac gacttggacg atgcgcacta
      901 cgactggccg agcgtcgccg acgtgcgcgc ctaccgcaac aaggtgcgcg cgctggtcac
      961 gcacctgatc gacaccgcgc cgctgacgct gccgctgggt tgggacaacc cgtggtgggc
     1021 gatcatcatg ggcgtcgagc acgagcgcat ccacgtcgag acttcgtcgg tgctgatccg
     1081 ccagcaccag ctcaagtacg tgaagccgca tccggcgtgg caaccgtgcc atgacaccgg
     1141 cccggcaccg gccaatgcgc tggtcaaggt cgaggccggc cacgtcaagc tcggccgcga
     1201 catcaccagc gcgctgtacg gctgggacaa cgaatacggc caccacgagg ccgatgtgcc
     1261 ggctttcgag gctgcgcgct acatggtcag caaccaggag ttcctcgcct tcgtcgaggc
     1321 cggcggttac acgctggcgg agtactggga cgaggaaggc aacggctggc gccagttcgc
     1381 caaggccacg cacccgacct tctggcgacg ctcggccgaa ggctggaagc tgcggctgat
     1441 gaccgaggaa gtggcgatgc cgtgggactg gccggtggaa gtgaactacc acgaggccaa
     1501 ggcgttctgc cgctggaaat ccgcgcgcga cggccagccc gtgcgcctgc ccaccgagga
     1561 cgagtggtat cggctgtacg acgagagccg ccacggcgac gccgcgccgg acgccaacat
     1621 caacctcgca cactgggcct cgtcgtgccc ggtgaaccat ttccgccagg gcgatttcta
     1681 cgacgtcacc ggcaacgcct ggcaatggac ggaaaccccg atctatccgt tcgagggctt
     1741 ccaggtgcac ccgatctacg acgacttcac cacgccatgc ttcgacggcc gccacaacct
     1801 gatgaagggc ggttcgtgga tcgccaccgg caacgaagcc gagcccgtgt cgcgctacgc
     1861 gttccggcgg cacttcttcc agcacgccgg gttccgctac gtggtgtcga agaacatgaa
     1921 gccggcgccg gcgtcgcact acgaaaccga caagctgctc tccgagtacg ccgagttcca
     1981 ctacggcgac acctacttcg gcgtgccgaa cttctccaag gcgctggtcg acttggcgct
     2041 gaccaagctc ggtgatgccc cgcggcgcac cgcgctggat ctcggctgcg cgtcgggccg
     2101 cgccacgttc gagctggcgc gtcatttcga gcacgtcacc ggcgtcgact tctccgcgcg
     2161 cttcatcggc cagggcgtcg cgctcgcacg cggcgacagc ctgcgctacc tgctgcagga
     2221 cgaaggcgaa ctggtcgaat acaagtcgca cagcctcgcc gagctggggc tcgccgacac
     2281 cgccgccaag gtcgagttct ggcaaggcga cgcgtgcaac ctcaagccca cgtttgccga
     2341 gtacgacttc gtgctcgcgg ccaacctgat cgaccgcctg tacaacccga cccagttcct
     2401 cgaagccatc cacgagcgga tgaacctcgg cggcctgctg atgattacct cgccgtacac
     2461 ctggctcgcc gagcacacgc cgcgtccgga atggcttggc gggttcaaga aggacggcga
     2521 aagcttcacc acgctcaacg ggctggacgc cgtgctcggc aagcacttcg agcggctggg
     2581 cgagccgcag gcagtaccgt tcgtgatccg cgaaacccgg cgcaagttcc agcacacgtt
     2641 gtcggaagtg acgttctggc ggcggcgcag ctgagcgtcg catgcatccc cacccgcttg
     2701 ccggcgggtg gggccgtgct cgtgaatcca gcccgagtcc ggccacaacc ccactccctg
     2761 caggtcggga tccatcccga caccgccctt cgcgacaacg tcgaagctca ccgtgtcgag
     2821 ttggagcccg acccgcaacg cttgcctcag cacgcgctgg catccagctc tgcaaggaca
     2881 aaacagcaac atgaccttcg acttcgatac ccccatcgac cgcagcggca cccacacggt
     2941 gaaatgggat ggcgtggcg
//
LOCUS       DASSVL010000217         3464 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_358327, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000217 DASSVL010000000
VERSION     DASSVL010000217.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3464)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3464)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3464
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_358327"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..624
                     /locus_tag="VFM52_03690"
     CDS             <1..624
                     /locus_tag="VFM52_03690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011407835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016881 - acid-amino acid ligase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RimK family alpha-L-glutamate ligase"
                     /protein_id="HET8764302.1"
                     /translation="RAHQLLAAHGIGLPATVFGDNPDDTTDLLAMLGPPPHVIKLNEG
                     SQGTGVVLAEKRAASQSVIEAFRGLYANFLVQQFIAEANGCDLRCLVVGGRVVAAMQR
                     EASAGDFRANLHRGGSAVAVTLDANEADMAVRAAGALGLGVAGVDLLRSAHGPLVLEV
                     NASPGLEGIETVTGVDVAGAVIELLESSVAPAASPRRRGRDTRLTHV"
     gene            850..1536
                     /locus_tag="VFM52_03695"
     CDS             850..1536
                     /locus_tag="VFM52_03695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018972795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HET8764303.1"
                     /translation="MRVLVIEDNSDIATNIGDYLEDRGSVVDFAGDGVTGLHLAVVND
                     FDVIVLDLTLPGMDGIEVAKKLRHEAHKQTPILMLTARDALEQKLTGFESGADDYMTK
                     PFALAELSARLEVLARRGKGPQSRVLKVADLTFNLDTLTVNRAGKAIQLNPIGLKLLQ
                     ALMEASPSVVTRQDLEQKVWGEELPDSDSLRVHIHGLRAAIDKPFDKPLIHTRHGIGY
                     RMVDPDAAQV"
     gene            1536..2819
                     /locus_tag="VFM52_03700"
     CDS             1536..2819
                     /locus_tag="VFM52_03700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007509414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HET8764304.1"
                     /translation="MQSRRKLRFRLVLSFALFGLGLSVLFASASLYVRAKVENQLVVT
                     ALQHDVDQAVDKVIKQPGQPATSELIDAWMWSDRTIYKAPLAWQNLATGVYDMHDVDA
                     NGRPRHYKLAVRRKDGIIGFVRYDISREDLGKRQLIASLVFSVLLFSLLSLAIGLWLS
                     RKVLKPVTLLAQRIRDFRKAGKAEPLAQNFADDEVGELAHALDEYSVRLTAMVEHDRE
                     FNSDVSHELRTPLAVIASTTELLQGSPDLTPKLAERLKRIERASRQATELIEALLLLS
                     RAERRGPTRGETTEVAKVAADVIESQRPQVRGKPLDVELEARAPLSVNAPASVLSVAL
                     TNLIGNAIKYTLEGSVRVEITADRIEVVDTGPGIKPEDAERLFQRGVRGEGAGGSGAG
                     LGLAIVRRLCDLYGWHVSMRPRVGTNGAIASIVFA"
     gene            complement(2900..3337)
                     /locus_tag="VFM52_03705"
     CDS             complement(2900..3337)
                     /locus_tag="VFM52_03705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015446591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8764305.1"
                     /translation="MRLVLIRLIAILEIAGGFYGFVRRLQPLLASGLTQGSIAAVLAL
                     AAYAFVLVAGVLLLENSERGVRFSRWAQLMQLPLIATPVLSYAVHCGGYFNVFAALHL
                     PLRAGLDWHFGSEGFVLAVGGPAASRLGINLLALLSWLVLKLR"
BASE COUNT          564 a         1202 c         1188 g          510 t
ORIGIN      
        1 cgcgcgcacc agctgctcgc cgcgcacggc atcggcctgc cggcaacggt gttcggcgac
       61 aatccggacg acaccaccga cctgctggcg atgctcgggc cgccgccgca cgtcatcaag
      121 ctcaacgagg gcagccaggg caccggcgtg gtgctggccg agaagcgcgc ggcctcgcag
      181 agcgtgatcg aggcgttccg cggcctgtat gccaacttcc tcgtgcagca gttcatcgcc
      241 gaggcgaacg gctgcgacct gcgctgcctg gtcgtcggcg ggcgcgtggt ggcggcgatg
      301 cagcgcgagg ccagcgccgg cgatttccgc gccaacctgc accgcggcgg cagcgcggtg
      361 gcggtgacgc tggacgcgaa cgaggcggac atggcggtgc gcgccgccgg cgccctcggc
      421 ctcggcgtcg ccggcgtcga tctgctgcgc tcggcgcatg ggccgctggt gctcgaggtg
      481 aatgcctcgc cggggctcga aggcatcgag acggtcaccg gggtggacgt ggccggcgcc
      541 gtgatcgagc tgctggagtc gtccgtggcg cccgcggcat cgccgcgccg gcgcggccgc
      601 gatacccggt taacccacgt gtaacccgcc gccccgtata agaaccgcgg tgtcctttcc
      661 gtggcgtgcc gcaaggccgg tgacggtgga tgacggtgac gggtggcaac tgcaacccgg
      721 atgcggcggc tggtgtccgt cgcatccggg ttttttcttg tgtcgcctgc gggacggcgg
      781 tggccacggc aaatgttaag cttgccaagg tggccggccc gtatcgccgg cggcatcgcg
      841 gagcggcgca tgcgcgtact ggtgatcgaa gacaacagcg atatcgccac caacatcggc
      901 gactatctcg aggaccgcgg cagcgtggtg gatttcgccg gcgacggcgt gaccggcctg
      961 catctcgcgg tggtgaacga tttcgacgtg atcgtgctcg acctcacctt gcccggcatg
     1021 gacggcatcg aggtggcgaa gaagctgcgc cacgaggcgc acaagcagac gccgatcctg
     1081 atgctcaccg cgcgcgacgc gctggagcag aagctgaccg gtttcgagtc cggcgccgac
     1141 gactacatga ccaagccgtt cgcgctggcc gagctttccg cccggctcga agtgctggcg
     1201 cgccgcggca agggcccgca gagccgcgtg ctcaaggtgg ccgacctcac cttcaacctc
     1261 gacacgctca ccgtgaaccg cgccggcaag gcgatccagc tcaacccgat cggcttgaaa
     1321 ctcttgcagg cgctgatgga agccagcccg tcggtggtga cccggcagga cctggagcag
     1381 aaggtgtggg gcgaggagct gcccgattcc gactcgctgc gcgtgcatat ccacggcctg
     1441 cgcgccgcca tcgacaagcc gttcgacaag ccgctgatcc atacccggca cggcattggc
     1501 taccgcatgg tcgatcctga cgctgcccaa gtttgatgca gtcccgccgc aaactccgct
     1561 tccgcctcgt tctctccttc gcgctgttcg gcctcggcct cagcgtgctg tttgcgtcgg
     1621 cgtcgttgta cgtgcgcgcc aaggtggaaa accaactggt ggtgaccgcg ctgcagcacg
     1681 acgtcgacca ggcggtggac aaggtcatca agcagcccgg ccagccggcc acgtccgagc
     1741 tgatcgatgc ctggatgtgg agcgaccgca cgatctacaa ggcgccgctc gcctggcaga
     1801 atctcgccac cggcgtgtac gacatgcacg acgtggacgc caacggccgc ccgcgccact
     1861 acaagctcgc ggtgcggcgc aaggacggca tcatcggctt cgtgcgctac gacatcagcc
     1921 gcgaggatct cggcaagcgc cagctcatcg cctcgctggt gttctcggtg ctgctgttca
     1981 gcctgctctc gctggcgatc ggcctgtggc tgtcgcgcaa ggtgctgaag ccggtgacgc
     2041 tcttggcgca gcgcatccgc gatttccgca aggccggcaa ggccgagccg ctggcgcaga
     2101 acttcgccga cgacgaggtc ggcgagctgg cgcatgcgct ggacgaatac tcggtgcggc
     2161 tcaccgcgat ggtcgagcac gaccgcgagt tcaactccga cgtgagccac gagctgcgca
     2221 cgccgctcgc cgtcatcgcc agcaccaccg agctgttgca aggttcgccc gacctcacgc
     2281 cgaaactcgc cgaacggctc aagcgcatcg agcgcgcctc gcgccaggcc accgagctga
     2341 tcgaggcgct gctgctcttg tcgcgtgccg agcgccgagg tcccacgcgc ggcgaaacca
     2401 cggaggtggc caaggtcgcc gccgacgtga tcgaaagcca gcgcccgcag gtgcgcggca
     2461 agccgctgga cgtggagctc gaagcgcgcg cgccgctcag cgtcaacgcg ccggcctcgg
     2521 tgctgtcggt ggcgctcacc aacctcatcg gcaacgcgat caagtacacg ctcgaaggca
     2581 gcgtgcgggt ggagatcacc gccgaccgca tcgaggtggt cgacaccggc cccggcatca
     2641 agccggagga tgcggagcgc ctgttccagc gcggcgtgcg cggcgaaggc gccggtggca
     2701 gcggcgccgg cctcggcctc gccatcgtgc gccggctgtg cgacctctac ggctggcacg
     2761 tgtcgatgcg tccgcgcgtg ggcaccaacg gcgccatcgc cagcatcgtg tttgcgtgat
     2821 cgtttgtggc tgcggtagca gggcggcgga cgtcacccgg cgcatcggac tgcgacacag
     2881 gtgacttcgc ggtcgccgac taccgcagct tcagcaccag ccacgacagc agcgccagca
     2941 ggttgatgcc cagccgcgac gccgccgggc cgcccaccgc cagcacgaaa ccctcgctgc
     3001 cgaagtgcca gtccagcccc gcgcgcagcg gcaggtgcag cgccgcaaat acgttgaaat
     3061 agccgccgca atgcaccgcg tagctcagca ccggcgtcgc gatcagcggc aattgcatga
     3121 gctgcgccca gcgcgaaaac cgcacgccac gctcgctgtt ttccagcagc agcacgccgg
     3181 ccaccagcac gaacgcatac gccgccagcg ccagtaccgc cgcgatcgat ccctgcgtca
     3241 ggccggatgc cagcaagggc tgcaggcggc ggacgaagcc gtagaagccg ccggcgattt
     3301 cgaggatggc gatcaggcga atgaggacga ggcgcatgtg ggctcccttg aacgaggtcg
     3361 gcattgtagg cgctgcgctt atgcgccgcc gctgtgggac ggcctcaccc tcgtgcccaa
     3421 cggcaacctc gccgggaagt gggtcgatgc gaacggctcc gcgc
//
LOCUS       DASSVL010000218         3421 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1007982,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000218 DASSVL010000000
VERSION     DASSVL010000218.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3421)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3421)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3421
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1007982"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..269
                     /locus_tag="VFM52_03710"
     CDS             <1..269
                     /locus_tag="VFM52_03710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008438557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8764306.1"
                     /translation="GVPIAFIAIKPSIARQALLPQIREANDLVRAYAATQKQVAYLDV
                     FTPMLGQDGQPQAKWFIQDGLHMNRTGYALWTSIVQPWVDAHGR"
     gene            complement(285..496)
                     /locus_tag="VFM52_03715"
                     /pseudo
     CDS             complement(285..496)
                     /locus_tag="VFM52_03715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007965281.1"
                     /note="frameshifted; internal stop; incomplete; partial in
                     the middle of a contig; missing N-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="EamA/RhaT family transporter"
     gene            complement(883..1779)
                     /gene="phhA"
                     /locus_tag="VFM52_03720"
     CDS             complement(883..1779)
                     /gene="phhA"
                     /locus_tag="VFM52_03720"
                     /EC_number="1.14.16.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019397421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004505 - phenylalanine 4-monooxygenase
                     activity [Evidence IEA];
                     GO_process: GO:0006559 - L-phenylalanine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine 4-monooxygenase"
                     /protein_id="HET8764307.1"
                     /translation="MATASAPRKIESQHTDRGTIPVYATGVVEQPWASYSRTDHDVWN
                     ALYKRQRALLPGRACAEFLDGVARLGLGENGIPKFADLNQVLRKATGWELIGVEGLLP
                     EQVFFDHLANRRFPVTWWIRKPEQMDYLSEPDLFHDLFGHVPLLLNPIFADYMQAYGR
                     GGMKAFGIGPEALANLTRLYWYTVEFGLINTAEGRRIYGAGILSSKGESVYCLDSPAP
                     NRIGFDLERIMRARYRIDTYQQTYFVIEDFEQLFDATKPDFAPIYARLRDLPALAAAE
                     IADGDKVFNRGTREGFATDADV"
     gene            1917..2432
                     /locus_tag="VFM52_03725"
     CDS             1917..2432
                     /locus_tag="VFM52_03725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015446366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC family transcriptional regulator"
                     /protein_id="HET8764308.1"
                     /translation="MATLDRIDLRLLATVQAEGRITNAELAERVNLSPSACLRRLQHL
                     EAGGVITGYAAQVDPQAVGLGLQAFVRVQLEKHEAAMIERFVERVASWDEVVACHALT
                     GDMDYLLHVYVADLADFSRFLLDHLLNAAGVADVNSSFVLRTVKRSPSLPLSRAGQAP
                     PQPQNSAGNRR"
     gene            2609..3409
                     /locus_tag="VFM52_03730"
     CDS             2609..3409
                     /locus_tag="VFM52_03730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017461621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HET8764309.1"
                     /translation="MDTATSSPPVHARLQPWRCLWRVPLLAGHIVLAILLAGLVMSWN
                     QNRVMRNGREPLPHRLIRWWAAGLLRIFGLRTLRIGEPLHDPVLFVANHTSWIDIVLL
                     HSQRAVCFVAKAEIAHWPLVGWLAASGGTIFHRRGSNYSLTAVMQVMVMRLRAERSVG
                     VFPEGGTSHHGELKVFHARLFQAALDAPAAVQPVALRFVRDGRRELDAGFRDGESFIG
                     NFLRLLAGEPMTVEVHFLPPVPPSPHARRQMAELARERIGAALEDHAA"
BASE COUNT          548 a         1161 c         1159 g          553 t
ORIGIN      
        1 ctggcgtgcc gatcgccttc atcgcgatca agcccagcat cgcgcgccag gccctgctgc
       61 cgcagatccg cgaggcgaac gacctggtgc gtgcctacgc ggccacgcag aaacaggtgg
      121 cgtacctgga cgtcttcacg ccgatgctgg gccaggatgg ccagccgcaa gccaaatggt
      181 tcatccagga tggcctgcac atgaaccgca ccggctacgc gctgtggaca agcatcgtgc
      241 agccatgggt ggatgcacac ggacgttgat gcgcacttgg ccggctacgc ggccggccgc
      301 tcacgcctga cgcggtgggc gttgaggcaa ctcagcacgc tcaacacgaa gcaagccagc
      361 gcggcgattt cgagtggcgc cggccagcgt cgttcccaca gtcagccgta cagcagggca
      421 aacggcgtct cgaacaggat catctggcca accaggtcag cagcaggcgg ctcatccggt
      481 tccacagggc ggtgccggtg tcgacgccag caccgccacg accgcgccat ctggatatcc
      541 cgcagcgcga cacggacgcc gcggcgggcg gcggttggcc tgtccacgac catgatgcag
      601 tgccaggtgg cggcgctgca ccccatgcca tccgtggtag cctccctccc gcgcggtagt
      661 ttccaacggg aacggttgag gggccttcgg cccgtcatga tccggttcga gtccggcgcc
      721 gcgcacctct ttcattccag cgtgccggtg cgcgctaatc gcgccccttc gcgcgacggc
      781 ggagggccgc cgtcgcgctg ccttgaacag cccggcgcaa cctcgacgcc cgggcgccga
      841 atcggggcct gatccgccct tcccgcacgc cgatccggac gctcacacgt ccgcgtcagt
      901 cgcaaatccc tcgcgcgtgc cgcgattgaa caccttgtcg ccgtcggcaa tctcggccgc
      961 cgcgagcgcc ggcaggtcgc gcagcctggc gtagatcggc gcgaagtccg gcttggtcgc
     1021 gtcgaacagc tgctcgaagt cctcgatgac gaaataggtc tgctggtagg tgtcgatgcg
     1081 gtagcgcgca cgcatgatgc gttcgaggtc gaagccgatg cggttcggcg ccggcgagtc
     1141 gaggcagtac accgactcgc ccttggagct gaggatgccg gcgccgtaga tgcgccggcc
     1201 ttcggcggtg ttgatgaggc cgaattccac cgtgtaccag tacagccggg tcaggttggc
     1261 aagcgcttcc gggccgatgc cgaacgcctt catgccgccg cggccgtagg cctgcatgta
     1321 gtcggcgaag atcgggttga gcagcagcgg cacgtggccg aacaggtcgt ggaacaggtc
     1381 cggctcggag aggtagtcca tctgttccgg cttgcggatc caccaggtca ccggaaaccg
     1441 ccggttcgcc aggtggtcga agaacacctg ctcgggcagc agcccttcga ccccgatcag
     1501 ctcccagccg gtggccttgc gcagcacctg gttcaggtcg gcgaacttcg ggatgccgtt
     1561 ttcgcccagg cccaggcgcg cgacgccgtc gagaaactcc gcgcaggcac gccccggcag
     1621 cagcgcgcgc tggcgcttgt acaacgcgtt ccacacgtcg tggtcggtgc ggctgtagct
     1681 cgcccacggc tgctcgacga cgccggtggc atagaccggg atggtgccgc ggtcggtgtg
     1741 ctggctctcg atcttgcgcg gggcgctggc ggtggccatg ggaaactccg gaggacgctc
     1801 gatggatgtt tcgagcatac ggcgaaaatc gcgcagcagg cttgcttcgt tgcgtatcgg
     1861 cgcggtagat atgcaacaaa cgtgcgcgat cgacgcacat cagaaaggtt tcgtgcatgg
     1921 ccacgctgga tcgcatcgac ctgcgcctgc tcgccacggt gcaggccgaa gggcgcatca
     1981 ccaatgccga gctggccgag cgggtgaacc tctcgccctc ggcgtgcctg cgtcgcctgc
     2041 aacacctcga agccggcggc gtcatcaccg gctacgcggc gcaggtcgat ccgcaggcgg
     2101 tcggcctcgg cttgcaggcg ttcgtgcgcg tgcagctgga gaagcacgag gcggcgatga
     2161 tcgaacgctt cgtcgaacgc gtcgccagct gggacgaagt ggtggcctgt catgcgctca
     2221 ccggcgacat ggactacctg ctgcacgtct acgtggccga cctcgccgac ttctcgcgct
     2281 tcctgctcga ccacttgttg aacgccgcgg gcgtcgccga cgtcaattcg agcttcgtgc
     2341 tgcgcaccgt caaacgctcg ccgtcgctgc cgttgtcgcg cgccggacag gcgccgccac
     2401 aaccgcaaaa cagtgcgggc aacagacgct agcagcctgc cgggccttgg tggtcgaggc
     2461 gaaagtttgg ttgtgtgagg acagattttc ggcgattcgc cgccccatgg tggttctatg
     2521 gggcaagaaa cgacggaaat atggaccaca cagccaaatt tgcagcccgg ccagccaagg
     2581 cccgacaggt tgctagacta ggcggccgat ggataccgcg acatcctccc cgcccgtcca
     2641 cgcgcgcctg caaccgtggc gctgcctgtg gcgcgtgccg ctgctggcgg gacacatcgt
     2701 gctggcgatc ctgctggccg ggctggtgat gagctggaac cagaaccggg tcatgcgcaa
     2761 cggtcgcgag ccgctgccgc accgcctgat ccgctggtgg gccgccggcc tgctgcgcat
     2821 cttcgggctg cgcacgctgc gcatcggcga accgctgcac gacccggtgc tgttcgtcgc
     2881 caaccacacc tcgtggatcg acatcgtgct gctgcacagc cagcgcgcgg tgtgcttcgt
     2941 ggccaaggcc gagatcgcgc actggccgct ggtcggctgg ctcgccgcga gcggcggcac
     3001 gatcttccac cgccgcggca gcaactactc gctgaccgcg gtgatgcagg tcatggtcat
     3061 gcgcctgcgc gccgaacgct cggtcggcgt gtttcccgag ggcggcacca gccaccacgg
     3121 cgagctgaag gtgttccatg cgcggttgtt ccaggcggcg ctcgacgcgc cggccgcggt
     3181 gcagccggtg gcgctgcggt tcgtgcgcga cggccggcgc gagctggatg ccggcttccg
     3241 cgacggcgaa agcttcatcg gcaatttcct gcgcctgctg gcaggcgaac cgatgacggt
     3301 ggaagtgcac ttcctgccac cggtgccgcc gtcgccacac gcccgccgac agatggccga
     3361 actggcgcgc gaacgcatcg gcgcggcatt ggaagaccac gccgcatgag cccgacgcgc
     3421 g
//
LOCUS       DASSVL010000219         2895 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_965277, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000219 DASSVL010000000
VERSION     DASSVL010000219.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2895)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2895)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2895
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_965277"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..188
                     /locus_tag="VFM52_03735"
     CDS             <1..188
                     /locus_tag="VFM52_03735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007081140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HET8764310.1"
                     /translation="GLGAGASSRHPLGLAVVGGLLVSQVLTLYLTPVIYLYMDRLRAR
                     LARPKPANTAALPGGEG"
     gene            complement(246..1685)
                     /locus_tag="VFM52_03740"
     CDS             complement(246..1685)
                     /locus_tag="VFM52_03740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015448744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HET8764311.1"
                     /translation="MRRLIPTLLAGALLAASGLAGAADTHIPDAAVKTATQLRDQALH
                     DGTAMALLTSLTTEVGPRLAGSDGDRRGVEWAVAKFKALGFDKVYTEPATYPKWVRRH
                     ESGAIVAPFPQPFVLTALGYSPGTPRGGLTAAVIGFPTLAALKAADPATIKGKIVYVG
                     YRMQRRRDGHDYGMGSAVRVAGPVIAAEKGAAGYLLRSAGTDAHQRIAHTGVTGFKPD
                     DPHAIPAAALSNPDADQLERVLAYGKPVTVKLDLDCGFEGDYTGANVIGEITGAKHPD
                     QVVALGGHLDSWDPGTGAIDDGAGIAISMAAAKLIKALPRRPDRTIRVIAFANEEMGL
                     WGARAYADRHAKDVGKFLLGTDSDLGAGKVYRLSASVKPEARHAIEQIANVLQPLGIE
                     YDATRPGGGGSDLGSMHAKGMAALTLSQDATHYFDWHHTANDTLDKVDPAELAQNVAA
                     YATWVYMAAQADGDFGSAPGAFAKDGSEE"
     gene            complement(1775..2188)
                     /gene="mscL"
                     /locus_tag="VFM52_03745"
     CDS             complement(1775..2188)
                     /gene="mscL"
                     /locus_tag="VFM52_03745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015379263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008381 - mechanosensitive monoatomic ion
                     channel activity [Evidence IEA];
                     GO_process: GO:0034220 - monoatomic ion transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="large-conductance mechanosensitive channel
                     protein MscL"
                     /protein_id="HET8764312.1"
                     /translation="MSMLQEFKAFAMRGNVMDMAVGIVIGAAFGKIVSSLVSDVIMPP
                     IGWLTGGIDFSAMKWVIKPADDSDPKHKIAEVAINYGTFINTIITFIIVAFAIFMVIK
                     VMNRMQKKQEAAPAAPPADVQLLTEIRDLLKEQKK"
     gene            complement(2221..>2895)
                     /locus_tag="VFM52_03750"
     CDS             complement(2221..>2895)
                     /locus_tag="VFM52_03750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008433686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HET8764313.1"
                     /translation="VEPPAIPSLPIQGSPQRFPVRRIFCIGRNYAEHAKEMGAAIEPG
                     RPLFFMKPADGIVADGADVPYPSLTHELHHEVEMVVALGAGGRDVPAERAARLVWGVG
                     VGLDLTRRDLQAQAKAKGHPWDAAKGFDHCAPVSALHRVDGALPAADTTLRLAVNGTE
                     RQHVQLGAMLHDVPHMLAFLSELFELHAGDLVFTGTPSGVAPLVRGDRFHAELAGYAT
                     LDGRVV"
BASE COUNT          387 a          968 c         1065 g          475 t
ORIGIN      
        1 tcggcctcgg cgccggcgcg tcgtcgcggc acccgctcgg ccttgccgtg gtcggcggcc
       61 tgctggtgtc gcaggtgctc accctgtacc tgacgccggt gatctatctc tacatggatc
      121 ggctgcgcgc gcgccttgcg cgcccgaagc ccgcgaatac cgcggcgttg ccgggcggcg
      181 agggctgagg cggcggcgcg ccggggcgat tcgccgcccc ggtgcggctc agcccttcgt
      241 cgacctcatt cctcgctgcc gtccttcgcg aaggcgccgg gcgccgaacc gaagtcgcca
      301 tccgcctgtg ccgccatgta gacccacgtg gcatacgcgg cgacgttctg cgccagctcc
      361 gcggggtcga ccttgtccag cgtgtcgttc gcggtgtggt gccagtcgaa gtagtgcgtg
      421 gcgtcctggc tcagcgtgag cgcagccatg ccttttgcgt gcatcgagcc gaggtcggag
      481 ccgccgccgc cgggacgcgt cgcgtcatat tcgatgccca gcggctggag cacattggcg
      541 atctgctcga tggcgtggcg cgcctcgggc ttcacgctgg cgctcaggcg gtacaccttg
      601 ccggcgccga ggtcggagtc ggtgccgagc aggaacttgc ccacgtcctt cgcatgccgg
      661 tccgcgtagg cgcgcgcgcc ccacaggccc atctcctcgt tggcgaaggc gatcacgcgg
      721 atggtgcggt cggggcgccg cggcagagcc ttgatgagct tcgcggcggc catcgagatg
      781 gcgatgccag cgccgtcgtc gatcgcgccg gtgcccgggt cccatgaatc caggtgcccg
      841 ccgagggcga cgacctggtc ggggtgcttc gcgccggtga tctcgccgat cacgttggcg
      901 ccggtgtagt cgccctcgaa gccgcaatcc agatccagct tcaccgtcac cggcttgccg
      961 taggccagca cgcgttcgag ctggtcggcg tcggggttgg acagcgcggc ggcgggaatc
     1021 gcgtgtgggt catccggctt gaagccggtg acgccggtgt gcgcgatgcg ctggtgcgcg
     1081 tcggtgccgg ccgagcgcag caggtaaccc gccgcgcctt tctccgcggc gatcacgggg
     1141 ccggccacgc gcaccgccga gcccatgccg tagtcgtggc cgtcgcggcg gcgctgcatg
     1201 cgatagccga cgtagacgat cttgcccttg atcgtcgccg ggtcggcggc cttcaacgcg
     1261 gccagggtcg ggaagccgat gaccgctgcg gtgaggccgc cccgcggcgt gcccggcgag
     1321 tagcccagcg cggtcaacac gaagggctgc gggaacggcg ccacgatggc gccgctttcg
     1381 tgccggcgta cccacttggg gtaggtcgcc ggctcggtgt agaccttgtc gaagccgagc
     1441 gccttgaact tggccactgc ccactcgacg ccgcggcggt cgccgtcgct gccggccagg
     1501 cgcgggccga cctcggtggt gagcgaggtg agcagcgcca tcgcggtgcc gtcgtgcagc
     1561 gcctggtcgc gcaactgggt ggcggtcttc actgctgcat cgggaatgtg cgtatcggcg
     1621 gcaccggcca ggccggatgc cgcgagcaat gcgccggcga gcagggtggg gatcaggcga
     1681 cgcatggcgg ctcctcgtgg tgggaagccg tgattatgcg ggcggcgcgc acgcacgccg
     1741 cccgccgaaa gtcacgcggc gggtgccgcg gtcatcactt tttctgttcc ttcaacaggt
     1801 cgcggatctc ggtcagcagc tgcacgtcgg ccgggggcgc ggcgggcgcg gcttcctgtt
     1861 tcttctgcat gcggttcatc accttgatga ccatgaagat cgcgaaggcg acgatgatga
     1921 aggtgatgat ggtgttgatg aaggtgccgt agttgatcgc gacctcggcg atcttgtgct
     1981 tgggatcgct gtcgtcggcc ggcttgatga cccacttcat ggcggagaag tcgatgccgc
     2041 cggtgagcca gccgatcggc ggcatgatca cgtcgctcac cagcgagctg acgatcttgc
     2101 cgaacgcggc gccgatcacg ataccgacgg ccatgtccat cacgttgccg cgcatggcga
     2161 acgccttgaa ctcctgcagc atgctcatgg tgcgatctcc ctgggtgaaa ggcgggtggg
     2221 tcagacgacg cgaccgtcga gcgtggcgta gccggccagc tcggcgtgga aacggtcgcc
     2281 gcgcacgagt ggcgcaacgc cggacggggt gccggtgaac acgaggtcgc cggcgtgcag
     2341 ctcgaacaat tcggacagga acgccagcat gtgcggcacg tcgtgcagca tcgcgccgag
     2401 ctgcacgtgc tggcgctcgg tgccgttcac cgcgagccgc agcgtggtgt cggccgccgg
     2461 caacgcgccg tcgacgcgat gcagtgcgga aaccggcgcg cagtggtcga agcccttcgc
     2521 cgcgtcccac gggtggccct tggccttggc ctgcgcctgc aggtcgcggc gggtcaggtc
     2581 gaggcccacg ccgacgcccc acaccagccg cgcggcgcgt tccgccggca cgtcgcggcc
     2641 accggcgccg agcgcgacga ccatctccac ctcgtggtgc agctcgtgcg tgagggaggg
     2701 gtacggcacg tcggcaccgt cggcgacgat gccgtcggcc ggcttcatga agaacagcgg
     2761 acgcccgggc tcgatcgccg cgcccatctc cttcgcgtgc tcggcatagt tgcggccgat
     2821 gcagaagatg cggcgtaccg gaaagcgttg cgggctgccc tggatcggca ggctggggat
     2881 ggcgggcggt tcgac
//
LOCUS       DASSVL010000220         2052 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_541635, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000220 DASSVL010000000
VERSION     DASSVL010000220.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2052)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2052)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2052
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_541635"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..927)
                     /locus_tag="VFM52_03755"
     CDS             complement(<1..927)
                     /locus_tag="VFM52_03755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019465816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HET8764314.1"
                     /translation="MANTIEVKVPDIGGHDGVPVIEVMVKVGDTVAKEQSLVTLESDK
                     ATMEVPSTAAGVVKAMKLKVGDEVSEGDVILVLEVAGAAAVPTPAPAPASASAPAPAA
                     PRPAPVPAASAPAPQAATASGRKADIECALVVLGSGPGGYSAAFRAADLGLDTVLVER
                     YGTLGGVCLNVGCIPSKALLHAAAVIDEAEAMAAHGVTFGKPKLDIDKLRDFKNKVVG
                     QLTGGLGSMAKQRKVRTVQGTGAFVSPHEMEVQTAEGTRLIRFEQAIIAAGSQSVKLP
                     AFPWDNPRVVDSTGALELKDVPGKLLVVGGGII"
     gene            complement(1031..>2052)
                     /locus_tag="VFM52_03760"
     CDS             complement(1031..>2052)
                     /locus_tag="VFM52_03760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008438043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="2-oxo acid dehydrogenase subunit E2"
                     /protein_id="HET8764315.1"
                     /translation="VEAPAPRHAEPGHSPEGDAGPHARPPFDAHLVMPGDTPYASPAV
                     RAFARELGGDVGQVTGSGRGGRVVREDVQSYVKHALASGARPVAGPAAGVGGLSLLPW
                     PKVDFAKFGPIEEHPLSRIQKISGANLARNWAMIPHVTQHEDADITELEAFRKQLGAE
                     HKDLRITPLVFQMKAVVAALKEYPKFNASLDETGEKLIMKKYFHIGIAVDTPDGLVVP
                     VIRDVDQKGVLDLARELAEISVKAREKKLGPADMSGGCFSISSLGGIGGTKVTPIINA
                     PEVAILGVSRSRMQPVWNGKEFAPRLMLPLSLSYDHRVIDGALAARFAVFLAKTLGDI
                     RRLLL"
BASE COUNT          294 a          733 c          702 g          323 t
ORIGIN      
        1 gatgatgccg ccgccgacca ccagcagctt gccgggcacg tccttcagtt ccagcgcgcc
       61 ggtggaatcc accacgcgcg ggttgtccca cgggaacgcg ggcagcttca ccgactgcga
      121 gccggcggcg atgatcgcct gctcgaagcg gatgagcctg gtgccttcgg ccgtctggac
      181 ttccatctcg tgcggcgaca cgaacgcgcc ggtgccctgc acggtgcgca ccttgcgctg
      241 tttcgccatg ctgcccagac caccggtgag ctggccaacc accttgttct tgaagtcgcg
      301 cagcttgtcg atgtcgagct tcggcttgcc gaaagtgacg ccgtgcgcgg ccatcgcctc
      361 ggcctcgtcg atcaccgccg ccgcatgcag cagcgccttg gacggaatgc aaccgacgtt
      421 caggcacacg ccaccgagcg tgccgtagcg ctcgaccagc acggtatcca ggccgaggtc
      481 ggcggcgcgg aacgcggcgg aataaccgcc ggggccggag ccgaggacga cgagcgcgca
      541 ttcgatgtcg gccttgcggc cggaagcggt ggccgcctgc ggcgccggtg cgctggccgc
      601 cggaaccggt gcaggacgcg gcgcggctgg cgccggcgcc gaagcacttg cgggagccgg
      661 cgccggagtc gggaccgccg cagcgcccgc cacttccagc accaggatca cgtcgccctc
      721 ggacacctcg tcgcccacct tgagcttcat cgccttgacc acgccggccg cggtcgacgg
      781 cacttccatc gtcgccttgt ccgattcgag cgtgaccagg ctctgctcct tggccaccgt
      841 gtcgcccacc ttgaccatca cctcgatcac cggcacgcca tcgtggccgc cgatgtcggg
      901 gacttttact tcgatcgtgt ttgccatggg tgttccttga acttggagac cggggtgaca
      961 gcgccaggag cgccccctca ccccagccct ctcccccatc gctgcgcgat gggggagagg
     1021 gcgacagaag tcagagcagc aggcggcgga tgtcgcccag cgtcttggcg aggaacaccg
     1081 cgaagcgcgc ggcgagcgcg ccgtcgatca cgcggtggtc gtagctgagc gacagcggca
     1141 gcatcaggcg cggggcgaac tccttgccgt tccacaccgg ctgcatgcgc gagcgcgaca
     1201 cgccgaggat ggccacttcc ggcgcgttga tgatcggcgt gaccttggtg ccgccgatgc
     1261 cgcccagcga ggagatcgag aagcagccgc cggacatgtc ggccggcccg agcttcttct
     1321 cgcgcgcctt gaccgagatt tccgccagct cgcgcgcgag gtcgagcacg cccttctggt
     1381 ccacgtcgcg gatcaccggc acgacgaggc cgtccggcgt gtcgaccgcg atgccgatgt
     1441 ggaagtattt cttcatgatc agcttctcgc cggtctcatc cagcgaggcg ttgaacttgg
     1501 ggtattcctt gagcgccgcg accacggcct tcatctggaa caccagcggg gtgatgcgca
     1561 ggtccttgtg ctcggcgcca agctgcttgc ggaacgcctc cagctcggtg atgtcggcgt
     1621 cttcgtgctg ggtgacgtgc gggatcatcg cccagttgcg cgcgaggttg gcgccggaaa
     1681 tcttctggat gcggctgagc gggtgctcct cgatcggccc gaacttggcg aagtcgacct
     1741 tgggccacgg cagcaggctg agcccgccga cgccggccgc cggccccgcg accgggcgcg
     1801 cgcccgacgc cagcgcgtgc ttgacgtagg actgcacgtc ctcgcgcacc acgcggccgc
     1861 cgcggccgct gcccgtgacc tggcccacgt cgccgccgag ctcgcgggcg aacgcgcgta
     1921 ccgccgggct ggcatacggg gtgtcgcccg gcatcaccag atgcgcgtcg aacggcgggc
     1981 gcgcgtgcgg gccggcatcg ccttccggcg aatggcccgg ctcggcatgc cgcggcgccg
     2041 gcgcttccac cg
//
LOCUS       DASSVL010000221         2185 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1360771,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000221 DASSVL010000000
VERSION     DASSVL010000221.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2185)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2185)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2185
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1360771"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(36..419)
                     /gene="apaG"
                     /locus_tag="VFM52_03765"
     CDS             complement(36..419)
                     /gene="apaG"
                     /locus_tag="VFM52_03765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008433781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Co2+/Mg2+ efflux protein ApaG"
                     /protein_id="HET8764316.1"
                     /translation="MKRKDSYTIDVQVQTRFVSEQSRPHDNRYVFAYTITLRNEGSVP
                     AQLLARHWVITDANGKIEEVHGDGVVGEQPWMRPGDDFEYTSGAVLETPVGTMGGSYQ
                     MLADDGTRFDAQIPRFTLSIPRTLH"
     gene            complement(465..1259)
                     /gene="rsmA"
                     /locus_tag="VFM52_03770"
     CDS             complement(465..1259)
                     /gene="rsmA"
                     /locus_tag="VFM52_03770"
                     /EC_number="2.1.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003481579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000179 - rRNA
                     (adenine-N6,N6-)-dimethyltransferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (adenine(1518)-N(6)/adenine(1519)-N(6))-
                     dimethyltransferase RsmA"
                     /protein_id="HET8764317.1"
                     /translation="MSARPKKSFGQHFLHDTRYVDDIVRAIAPRPGDVLIEIGPGEGA
                     LTQPLLAAAGTLTAIELDTDLIPALTARAAAVGALTIIQADVLKVDFGALARERGGAR
                     LRIAGNLPYYISSPILFHCIAHAAAIHDMHFMLQKEVVDRMAAAPGSKVYGRLSVMLQ
                     LACHVVPLFEVPPAAFRPPPKVDSAVVRLVPRAAHELPDVDADALQQVVKAAFGQRRK
                     TLANALRGVLDAGAIRAVGIDPQARAETLAPADFVRLARHSAATSS"
     gene            complement(1256..>2185)
                     /gene="pdxA"
                     /locus_tag="VFM52_03775"
     CDS             complement(1256..>2185)
                     /gene="pdxA"
                     /locus_tag="VFM52_03775"
                     /EC_number="1.1.1.262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017460204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050570 - 4-hydroxythreonine-4-phosphate
                     dehydrogenase activity [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxythreonine-4-phosphate dehydrogenase
                     PdxA"
                     /protein_id="HET8764318.1"
                     /translation="TDRDLLARAAARCGLHLDLHDDDGRTLARRPPGTLRVHHVPLGA
                     TETPGHPDARNGAHVIATLAAAADGCMAGRYAAVVTAPLQKATVIEAGFGDFTGHTEF
                     FAHRAQCDVVMMLASPELRVTLATTHLPLREVPAAITRPVLERCLRIVHHALRVQFGI
                     AAPRIAVLGLNPHAGENGHLGREELDLVIPLLDTLRTEGMQLIGPLPADTAFVPAQRA
                     RYDAVLAMYHDQALPVLKSEAFDRTVNVTLGLPFIRTSVDHGTALDLAGTGSADPASL
                     LAATHMAMELVARRAAGSPGEDPGATPAPRTAP"
BASE COUNT          296 a          708 c          844 g          337 t
ORIGIN      
        1 tcgccgattg cgtaagtggc catgcgcgcg gcgtcctagt gcagcgtgcg cgggatggac
       61 agggtgaagc gcgggatctg cgcgtcgaac cgcgtgccgt cgtcggccag catctggtag
      121 ctgccgccca tcgtgcccac cggcgtctcc agcactgcgc cggaggtgta ctcgaaatcg
      181 tcgcccggcc gcatccacgg ctgctcgccg accacgccgt cgccgtgcac ttcctcgatc
      241 ttgccgttgg cgtcggtgat gacccagtgc cgtgcgagga gctgcgccgg aacgctgccc
      301 tcgttgcgca gcgtgatggt gtaggcaaac acgtaacggt tgtcgtgtgg ccgcgattgt
      361 tcggacacga agcgggtttg tacctgcacg tcgatcgtgt aggagtcttt gcgtttcatg
      421 ccgacgattg tacggcctgc gccgcacgaa acggcgcttg caggtcagga gctggtcgca
      481 gcggagtggc gcgcgaggcg cacgaagtcc gctggcgcga gcgtctcggc gcgtgcctgc
      541 gggtcgatgc cgacggcacg gatggcgccc gcgtcgagca cgccgcgcag cgcgttggcg
      601 agcgtcttgc ggcgttggcc gaacgcggcc ttgaccactt gctgcagggc gtcggcatcg
      661 acgtcgggca gttcgtgcgc ggcgcgcggc accagccgca ccaccgcgga atccaccttc
      721 ggcggcgggc ggaacgccgc cggcggcacc tcgaacaacg gcaccacgtg gcaggcgagc
      781 tgcagcatca ccgacaaccg cccgtacacc ttgctgcccg gtgccgcggc catgcggtcg
      841 acgacctctt tctgcagcat gaaatgcatg tcgtggatgg cggcggcgtg cgcgatgcaa
      901 tggaacagga tcgggctgga gatgtagtac ggcaggttgc cggcaatgcg cagccgcgcg
      961 ccgccgcgct cgcgggccag cgcgccgaag tcgaccttga gcacgtcggc ctggatgatg
     1021 gtgagcgcac cgaccgccgc ggcgcgtgcc gtcagcgcgg ggatcaggtc ggtgtccagc
     1081 tcgatcgcgg tgagcgtgcc ggcggcggcg agcagcggct gggtcagcgc gccttcgccg
     1141 ggtccgatct cgatcagcac gtcgccgggc cggggtgcga tcgcgcgcac gatgtcgtcg
     1201 acgtagcggg tgtcgtgcag gaaatgctgg ccgaagcttt ttttcggacg ggcgctcacg
     1261 gggctgtccg tggcgccgga gtcgcgcccg ggtcttcgcc tggcgaaccc gcggcgcggc
     1321 gcgccaccag ttccatcgcc atgtgcgtcg ccgcgagcag gctcgccgga tcggcgctgc
     1381 cggtgccggc gaggtcgagc gcggtgccgt ggtcgaccga ggtgcggatg aacggcaggc
     1441 cgagggtgac gttcaccgtg cggtcgaacg cctcgctctt cagcactggc agcgcctggt
     1501 cgtggtacat cgcgagcacg gcgtcgtagc gcgcgcgttg cgcgggcacg aaggcggtgt
     1561 cggccggcag cgggccgatg agctgcatgc cctcggtgcg cagcgtgtcg agcagcggga
     1621 tgacgaggtc gagttcctcg cggccgaggt ggccgttctc acccgcgtgc gggttcaggc
     1681 cgagcaccgc gatgcgcggt gcggcgatgc cgaactgcac gcgcagcgcg tggtggacga
     1741 tgcgcaggca gcgttcgagc acgggccggg tgatcgcagc tggcacctcg cgcagcggca
     1801 ggtgggtggt ggccagcgtg acgcgaagct cggggctcgc cagcatcatc accacgtcgc
     1861 actgcgcgcg gtgggcgaag aattcggtat ggccggtgaa gtcgccgaag ccggcctcga
     1921 tgacggtcgc cttctgcagc ggcgcggtga ccacggcggc gtagcggccg gccatgcagc
     1981 cgtcggcggc ggcggcgagc gtggcgatga cgtgggcgcc attgcgggcg tccgggtggc
     2041 cgggagtttc cgtcgcgccg agcggcacgt ggtgcacgcg caatgtgccg ggcggacgcc
     2101 gggcaagcgt gcgtccgtcg tcgtcatgca ggtcgagatg cagcccgcac cgcgccgccg
     2161 cgcgcgcgag caggtcgcga tcggt
//
LOCUS       DASSVL010000222         2723 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1092845,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000222 DASSVL010000000
VERSION     DASSVL010000222.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2723)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2723)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2723
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1092845"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..272)
                     /locus_tag="VFM52_03780"
     CDS             complement(<1..272)
                     /locus_tag="VFM52_03780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015448727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HET8764319.1"
                     /translation="MAVPGAAAAAEPAGQATGQSAPQTTPQQAAAAKKPKTTTLSEVT
                     VTAQKRVENLQKVPISINVLENDQLQALHVQSFEDYVQYLPSVDFQ"
     gene            complement(379..2406)
                     /locus_tag="VFM52_03785"
     CDS             complement(379..2406)
                     /locus_tag="VFM52_03785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007807551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfotransferase"
                     /protein_id="HET8764320.1"
                     /translation="MTSAPATGNLQQALAHAARLLGRDPTLAIEQLGEILQACGPQPV
                     ALRMLAQAKALQGDAPGALEILAPLARDYPDWAPAQLDLGLALGQVGRGQEAIAALRR
                     AVALQPELPQAWRALGDRLMESGDQAAAEAAYASHVRHSTHDPRLLAPAVALTEGRLP
                     EAEALLRAHLKQAPTDVAAIRMFAEVAARLDRNEDARHLLERCLELAPGFREARLNYA
                     LVLHRSNRPELALAQIDRLLADDPHHAACRNLQAAVLCRVGDYDRAIRIYAELVRSYP
                     DNPKLWLSHGHALKTAGHLDAAIAAYRRSLALRPSFGEVWWSLANLKTFHFGADELAV
                     MRDQLARTDLEDDDRLHLEFAMGKALEDAHEYASSFGHYARANAIRHRQLQYRADETH
                     ERMAYVRQHYTREFFAARAGAGCAAPDPIFVVGLPRSGSTLIEQILASHSQVEGTMEL
                     PEVASITRELRQQGGADGVMPYHRALAALDADRLRALGERYLARTRIQRKTAAPFFVD
                     KMPNNFAHIGLIQLMLPNAKIIDARRHPMACGFSVFKQHFARGQGFGYDLRDIGRYYL
                     DYVALMAHFDAVLPGRIHRVHYERVVEDTEGEVRRLLDYCGLPFEAGCLRFFENVRPV
                     RTASSEQVRQPIYRTGMEHWRHYAPWLGPLAEALGPALGGYPAAPVEGVRV"
BASE COUNT          421 a          951 c          929 g          422 t
ORIGIN      
        1 tgctggaagt cgacgctggg caggtactgt acgtaatcct cgaagctctg cacatgcagg
       61 gcctgcagct ggtcgttctc cagcacgttg atgctgatcg gcaccttctg caggttctcg
      121 acacgcttct gcgcggtcac ggtgacctcg gagagcgtgg tggtcttggg tttcttcgct
      181 gcagcagcct gctgcggcgt ggtttgcggc gcggattgcc ccgtcgcctg ccccgccggt
      241 tccgccgcgg ccgccgcgcc aggcacggcc atggccaagc cgatcgccac taccagcggc
      301 aaccgggccg gcctcgcatt tcgcttgatg tcttcgactc gcatgatgcc tcccccgaag
      361 tcgtgaaact gtctggattt acaccctgac tccctcgacg ggcgccgcgg gataaccccc
      421 cagcgccggt cccaacgctt ccgccagcgg ccccagccac ggcgcgtagt gccgccagtg
      481 ctccatgccg gtacggtaga tcggctggcg cacctgctcc gagctggccg tacgcaccgg
      541 ccgcacgttc tcgaagaacc gcaggcagcc tgcctcgaac ggcaggccgc aataatccag
      601 caggcgccgc acctcgcctt cggtgtcctc caccacgcgc tcgtagtgca cgcgatggat
      661 gcgccccggc agcacggcgt cgaaatgcgc catcagcgca acgtagtcga ggtagtagcg
      721 cccgatgtcg cggaggtcgt agccaaagcc ctgcccgcgc gcgaaatgtt gcttgaacac
      781 cgagaaaccg caggccatgg gatgccggcg tgcgtcgatg atcttcgcgt tcggcagcat
      841 caactggatc aggccgatgt gcgcgaagtt gttcggcatc ttgtccacga agaacggcgc
      901 cgccgtcttg cgctggatgc gggtgcgcgc caggtagcgc tcgcccagcg cacgcaggcg
      961 gtcggcatcg agcgcggcca gcgcccggtg gtagggcatc acgccatcgg cgccgccctg
     1021 ctggcgcaac tcgcgcgtga tcgaggcgac ctcgggcagc tccatcgtgc cttcgacctg
     1081 gctgtggctg gcgaggatct gctcgatcaa ggtggaaccc gaacgcggca ggccgaccac
     1141 gaagatgggg tcgggcgcgg cgcagccggc accggcgcgc gcggcgaaaa actcgcgcgt
     1201 gtagtgctgg cgcacgtatg ccatgcgctc gtgggtctcg tccgcgcggt actgcagctg
     1261 ccggtggcgg atggcgttgg cgcgggcgta gtggccgaag gacgatgcat attcgtgcgc
     1321 atcctcgagc gccttgccca tcgcaaactc gagatgcagg cgatcgtcgt cctcaaggtc
     1381 cgtgcgggcc agctggtcgc gcatgaccgc cagctcgtcc gcaccgaagt ggaaggtctt
     1441 gaggttggcg aggctccacc agacctcgcc gaacgaggga cgcagcgcaa ggctgcgccg
     1501 gtaggctgca atcgccgcgt ccaggtgccc cgcggtcttc agtgcatggc cgtggctcag
     1561 ccacagcttg gggttgtccg ggtagctgcg caccagctcg gcgtaaatgc ggatggcgcg
     1621 gtcgtagtcg ccgacgcgac acagcacggc ggcctgcaga ttgcggcagg ccgcgtgatg
     1681 ggggtcgtcc gccagcaacc ggtcgatctg cgccagcgcc agttccgggc ggttgctgcg
     1741 atgcaggacc agtgcatagt tcaggcgcgc ctcgcggaaa ccgggggcca gttccaggca
     1801 gcgctccagc agatgccggg cgtcctcgtt gcgatccagc cgagccgcca cctcggcgaa
     1861 catgcggatc gccgccacgt cggtgggcgc ctgcttcagg tgcgcacgca gcaacgcctc
     1921 ggcttcgggc aggcgcccct cagtcagcgc cacggcaggc gccagcaggc gcggatcgtg
     1981 cgtggaatgg cgcacgtggc tggcgtaggc cgcctccgcc gccgcttggt cgcccgactc
     2041 catcaggcga tcgcccagcg cgcgccacgc ttgcggcagt tccggctgca gcgccaccgc
     2101 ccggcgcaag gccgcgatgg cctcctgccc gcggccgacc tgccccagcg ccagcccgag
     2161 gtcgagctgg gccggcgccc aatcgggata atcgcgtgcc agcggcgcca ggatttcaag
     2221 cgcgccgggc gcgtccccct gcaaggcctt cgcttgcgcc agcatgcgca aggcaaccgg
     2281 ctgcggcccg caagcttgca ggatctcgcc gagttgttcg atggccagcg tcggatcgcg
     2341 tcccagcaac cgtgcggcat gcgccagggc ctgctgcagg ttgccggtgg cgggcgcgct
     2401 cgtcatgcac ctggccgtcg tggacacggc tcacgcggca ggcgcggcga caactcgacc
     2461 gttgacatag acgacaggta cccccgaggc ggcggcgaca atctacaacc gttttccgtc
     2521 atcgtgatag gcggagtcga ccaaggtcga ccggcaaccc gcactcgtcg accagcgcac
     2581 ggcaaccggc atacactcgg gcgcacgccg gctgcgcgcc gaggggagcc caccgtgtcc
     2641 agcgatacca cgatcgagga gttgccgcgc gcgcatgcgc tcgcggcccg ctactacagc
     2701 ggcaccgcca cgctggcgat gga
//
LOCUS       DASSVL010000223         2584 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_640554, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000223 DASSVL010000000
VERSION     DASSVL010000223.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2584)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2584)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2584
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_640554"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..258)
                     /locus_tag="VFM52_03790"
     CDS             complement(<1..258)
                     /locus_tag="VFM52_03790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007808060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EmrA/EmrK family multidrug efflux transporter
                     periplasmic adaptor subunit"
                     /protein_id="HET8764321.1"
                     /translation="MSEALTPTDTRDSGLAAKDPPKRRRALLIVASVFLLIALAWFLL
                     WLFVFSVREQTDNAYVGGNVVAISAQVPGTVVAVLADDTQHV"
     gene            complement(255..1748)
                     /locus_tag="VFM52_03795"
     CDS             complement(255..1748)
                     /locus_tag="VFM52_03795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017461225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux transporter outer membrane subunit"
                     /protein_id="HET8764322.1"
                     /translation="MTSLRSRLLAAPTLALLVAGCAMAPPKVAPPQLQQEAPLAGLAA
                     PAGSQWPAPDWWRAYADPQLDDLMAIALRQSPDLAEARARVTGAEQSVRLAAAQAGLR
                     IDGSAQVSRQRVSEHGLMPPQLLGFSWYNQADLGVQFRYDFDWWGKQRAAVASAVDQA
                     RAAEAQRSAAALAIQHAVADTYFGWLADEARLALAAQGVATQQQLLKLTELRVAQGVD
                     LPDTATEARSRVAMARQAETALQSSARIRQLGLATLLGVTPATLPPLAPRPLPTINAQ
                     LPADARIDLAARRPDIAASRWQVEAALRQTDVARARFFPDFSITALAGLSSTNQGTPP
                     LFGGDGGGSLANVFKAGSRVFGITPALHLPIFEGGQLKAAHGISQAQLDAAVAQYDAA
                     VFHAAREAGSQALAAQQLAAQREQQHTQVAASERLYASAEARLRQGVRDARESLASHA
                     QLLQQQDQAVALHAQALTTDLALIQALGGGYRMPPIAAPHPARSQQP"
     gene            complement(1759..2283)
                     /locus_tag="VFM52_03800"
     CDS             complement(1759..2283)
                     /locus_tag="VFM52_03800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008434614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HET8764323.1"
                     /translation="MAGLVEHIARMDEGIAHTHAAIPDFPVGPASLYRLLLMVGERMD
                     AALADELKPHRLNHSEFLTLMILYSCPDGCSTPGELCDFTSQGTTNMTRIGNALVGRG
                     LVSRGTSRTDRRRVVIRITAAGRRFVSKLLPPMFPRVEAMFAGFSATERRSFDRLLRK
                     LAGNLDRGEPGDTP"
     gene            complement(2346..>2584)
                     /locus_tag="VFM52_03805"
     CDS             complement(2346..>2584)
                     /locus_tag="VFM52_03805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013535418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="TatD family hydrolase"
                     /protein_id="HET8764324.1"
                     /translation="RARRLRRIVAQMPIEHLLLESDAPDQPGVNHRGERNEPAFVAEV
                     LRAVAELRGEPAAAIAAATSANTRQLFALPVADA"
BASE COUNT          368 a          839 c          977 g          400 t
ORIGIN      
        1 gacgtgctgg gtgtcgtcgg cgagcacggc caccaccgtg ccgggcactt gcgccgagat
       61 ggcgacgacg ttgccgccga cgtaggcgtt gtcggtctgc tcgcgcacgg agaacacgaa
      121 caaccacaac aggaaccacg ccagcgcgat gagcaggaag acgctggcga cgatcaacag
      181 cgcgcggcgc cgcttcggcg ggtctttcgc cgccagtccg ctgtcacggg tgtcggtggg
      241 ggtgagggct tcgctcatgg ctgttggctc cgggccggat gcggggcggc gatcggcggc
      301 atgcggtagc cgccgccgag ggcctggatg agggcaagat cggtggtcag cgcctgcgcg
      361 tgcagggcaa cggcctgatc ctgttgctgc agcagttgcg catggctggc aaggctttcg
      421 cgggcatcgc gcacaccctg gcgcaggcgc gcttcggcgc tggcgtacaa ccgctcactg
      481 gcggcgacct gggtatgttg ctgttcgcgc tgcgcggcca gctgttgcgc ggccagtgcc
      541 tggctgccgg cctcgcgggc ggcgtggaac acggcggcgt cgtactgcgc caccgcggca
      601 tcgagctgcg cctggctgat gccgtgcgcg gccttgagtt gcccgccttc gaagatcggc
      661 aggtgcaagg ccggggtgat gccgaacacg cggctgccag ccttgaatac gttggcgagg
      721 ctgccgccgc catcgccacc gaacagcggt ggcgtgccct ggttggtgct cgacaggccg
      781 gccagcgcgg tgatgctgaa atccgggaag aagcgggcac gggcgacgtc ggtctggcgc
      841 aacgcggctt cgacctgcca gcggctggcg gcgatgtccg gccggcgtgc ggcgagatcg
      901 atgcgggcgt ccgccggcaa ctgggcgttg atggtcggca gcgggcgcgg tgcgagcggc
      961 ggcagcgtcg ccggcgtcac gccaagcagg gtggcgaggc cgagctgacg gatacgcgcc
     1021 gaactttgca gtgcggtttc cgcctggcgc gccatggcca cccgggaacg tgcttccgta
     1081 gccgtatccg gcagatcaac gccctgcgcc acgcgcagtt cggtgagctt cagcaactgc
     1141 tgctgggtgg cgacgccctg cgcggccagg gccagccggg cctcgtccgc aagccagccg
     1201 aaataggtgt cggcgacggc atgctggatc gccagtgcgg cggcgctgcg ctgggcttcg
     1261 gcagcccgcg cctggtcgac cgcgctggcg acggcggcgc gctgcttgcc ccaccagtcg
     1321 aagtcgtatc ggaactgcac gccgaggtcg gcctggttgt accagctgaa gccgagcagt
     1381 tgcggcggca tcaggccgtg ttcgctcacg cgctgacggc tcacctgggc gctgccgtcg
     1441 atgcgcaggc cggcttgcgc cgccgccagc cgcaccgatt gctcggcgcc ggtaacgcgc
     1501 gcgcgggctt cggccagatc tggcgattgg cgcaaggcga tggccatcag gtcgtcgagt
     1561 tgcgggtcgg cataggcgcg ccaccagtct ggtgccggcc actggctgcc ggccggcgcc
     1621 gcgaggccgg ccaggggtgc ctcctgttgc agctgcggtg gcgcgacttt cggcggggcc
     1681 atggcacagc cggcaaccag cagggccagc gtcggggcgg cgaggagccg tgagcggagg
     1741 gaggtcatcg ggagtccttc aaggcgtgtc gccgggttcg ccccggtcga gattgccggc
     1801 cagcttgcgc agcaggcggt cgaagctgcg ccgttcggtc gcactgaagc cggcaaacat
     1861 ggcttcgacg cgcggaaaca tcggtggcag cagcttgctt acgaaacggc gaccggccgc
     1921 agtgatgcgg atcaccaccc gccggcgatc ggtgcggctg gtcccgcgcg agaccagccc
     1981 gcgtcccacc agcgcattgc cgatgcgggt catgttggtc gtgccctgcg aggtgaagtc
     2041 gcacaactcg ccaggtgtcg agcagccgtc ggggcagctg tacaggatca tcagcgtgag
     2101 gaactcgctg tggttcagcc ggtgcggctt gagctcgtcc gccagcgccg cgtccatgcg
     2161 ctcgccaacc atcagcagca ggcggtacag gctggccggc ccgaccggaa aatcggggat
     2221 ggccgcatgc gtgtgcgcga tgccttcgtc catgcgggcg atgtgctcga ccaggccagc
     2281 catttcatca accaatagtt cagtgatgaa agagtgtgcc ggtgcgaagc ggcgttgcgc
     2341 aagtgtcagg cgtcggcgac gggcagggcg aacaactggc gtgtgttggc gctggtggca
     2401 gcggcgatgg ccgctgccgg ctcgccgcga agttcggcga ccgcccgcag cacctcggcg
     2461 acgaacgccg gctcattgcg ctcgccgcga tggttcacgc cgggctggtc cggtgcgtcg
     2521 ctttccagca gcaggtgttc gatcggcatc tgcgccacga tgcggcgcaa ccgccgcgcg
     2581 cgtg
//
LOCUS       DASSVL010000224         2505 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_555984, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000224 DASSVL010000000
VERSION     DASSVL010000224.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2505)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2505)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2505
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_555984"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1202)
                     /gene="glmU"
                     /locus_tag="VFM52_03810"
     CDS             complement(<1..1202)
                     /gene="glmU"
                     /locus_tag="VFM52_03810"
                     /EC_number="2.3.1.157"
                     /EC_number="2.7.7.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019397989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003977 - UDP-N-acetylglucosamine
                     diphosphorylase activity [Evidence IEA];
                     GO_function: GO:0019134 - glucosamine-1-phosphate
                     N-acetyltransferase activity [Evidence IEA];
                     GO_process: GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional UDP-N-acetylglucosamine
                     diphosphorylase/glucosamine-1-phosphate
                     N-acetyltransferase GlmU"
                     /protein_id="HET8764325.1"
                     /translation="MPAPLHIVVLAAGAGTRMKSARPKVLMPLAGRPLLAHVLDAARA
                     LRPAAIHVVYGHGGDQVRAAFAADADLAWVEQTERLGTGHAVQQALPAVPDDARVLVL
                     YGDVPLIRAETLRALVAVDGGFGLLAIQLADPHGYGRVESDAAGCVRGVVEEKDATAA
                     QRAITLVNTGILVAPAGALRRWIAGLGCDNAQHEYYLTDIFGMAARAGQAARAVVCAD
                     PVEAAGANDAIQLAELEAAYRKRTAQALQRAGVRLADPARFDARGTVAAGRDVEIDVD
                     VILEGEVRLGDEVRIGPFTRLRNVDLAAGTVVHAHCDLEGVVTRGPCLIGPFARLRPG
                     TELAAGVHVGNFVETKKTRIGEGSKANHLSYLGDTVIGRGVNVGAGTITCNYDGVNKF
                     ATHIGDGA"
     gene            complement(1435..1857)
                     /locus_tag="VFM52_03815"
     CDS             complement(1435..1857)
                     /locus_tag="VFM52_03815"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019398223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit epsilon"
                     /protein_id="HET8764326.1"
                     /translation="MTTIRVDIVSAEAQIFSGEATMVVATGEVGELGITPRHAPLITR
                     LKPGHVDVLQEGGERAQFYVSGGILEVQPQVVTVLADTAMRAADLDETEAQKAKKEAE
                     DAIANRTEEMDVSEAQRRLAQAQAQLQALERLRKNLKH"
     gene            complement(1969..>2505)
                     /locus_tag="VFM52_03820"
     CDS             complement(1969..>2505)
                     /locus_tag="VFM52_03820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014401705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit beta"
                     /protein_id="HET8764327.1"
                     /translation="GSITSIQAVYVPADDLTDPSPATTFAHLDSTVTLSRQIASLGIY
                     PAVDPLDSTSRQLDPQVVGQEHYDIARRVQGTLQRYKELKDIIAILGMDELSEEDKQV
                     VARARKCERFFSQPFHVAEVFTGSPGKYVPLKETIRGFKMIVDGEVDYLPEQAFYMVG
                     GIDEAIKKGEEMGAKKAA"
BASE COUNT          362 a          863 c          879 g          401 t
ORIGIN      
        1 aaggcgccgt ccccgatgtg cgtggcgaac ttgttcacgc cgtcgtagtt gcaggtgatg
       61 gtgcccgcgc ccacgttgac gccgcggccg atcacggtgt cgccgagata actgaggtgg
      121 ttcgccttgc tgccttcgcc gatgcgcgtc ttcttggtct cgacgaagtt gccgacgtgc
      181 acgccggccg ccagctcggt gccgggacgc aggcgcgcga acgggccgat caggcacggg
      241 ccgcgggtga ccacgccttc gagatcgcag tgcgcgtgca cgacggtgcc ggcggcgagg
      301 tcgacattcc tgaggcgcgt gaacgggccg atgcgcacct cgtcgccaag ccgcacctcg
      361 ccttcgagga tgacgtcgac gtcgatctcg acgtcgcgcc cggcggcgac cgtgccgcgc
      421 gcatcgaagc gcgccgggtc ggcgaggcgc acgccggcgc gctgcagcgc ctgcgcggtg
      481 cgcttgcggt acgcggcttc gagctcggcc agctggatcg cgtcattcgc acccgcggcc
      541 tcgaccggat ccgcgcagac cacggcacgc gccgcctgtc cggcccgcgc ggccatgccg
      601 aagatgtcgg tcaggtagta ctcgtgctgc gcgttgtcgc agccgaggcc cgcgatccag
      661 cggcgcagcg cgcccgccgg ggcgacgagg atgccggtgt tgaccagggt gatcgcgcgc
      721 tgcgccgcgg tcgcgtcctt ttcctcgacc acgccccgca cgcatccggc cgcatcgctc
      781 tcgacccggc catagccgtg cggatcggcc aactggatcg cgagcaggcc gaagccgcca
      841 tcgaccgcga ccagcgcacg cagggtttcc gcgcggatca gcggcacgtc gccgtagagc
      901 accagcacgc gcgcgtcatc cggcaccgcc ggcagcgcct gttgcacggc atgcccggtg
      961 ccgaggcgct cggtctgttc cacccacgcg aggtcggcgt ccgcggcaaa cgccgcgcgc
     1021 acctggtcgc cgccatgccc atacaccacg tggatcgcgg ccggccgcag cgcccgcgcc
     1081 gcatccagca cgtgcgccag cagggggcgt ccagcaagcg gcatcagcac cttcggccgc
     1141 gccgacttca tgcgggtgcc ggcgccggcg gcgagaacga cgatgtgcaa gggggcaggc
     1201 atgacgggcg atccttcaag acatgggcga aacaatgccg gaagccgcaa gtgttggccg
     1261 acgccggcgc cgacacaagc cacacggcgt gccgcaacgg caacggatca cgcgcggcgt
     1321 gccaatcacc gtggtgtcgg gatttgtccc gacggccacc gggcacattg cagcaatcca
     1381 gacgcaagac gccggcactc gggccggcgt cccaatgcgc gagagcggat ggcctcagtg
     1441 cttgaggttc ttgcgcagcc gttccagcgc ctgcagctgg gcctgggcct gggcgagccg
     1501 gcgctgcgct tcgctgacat ccatttcctc ggtgcggttg gcgatcgcgt cctcggcttc
     1561 cttcttggcc ttctgcgctt ccgtctcgtc gagatcggcg gcgcgcatcg cggtgtcggc
     1621 gagcacggtg acgacctgcg gctgcacttc gagaatgcca ccggagacgt agaactgcgc
     1681 tcgctcgccg ccctcctgca gcacgtcgac gtggccgggc ttgaggcgcg tgatgagcgg
     1741 cgcgtggcgc ggcgtgatgc cgagctcgcc cacttcgccg gtggcgacca ccatcgtggc
     1801 ttcgccggag aagatctgcg cctcggcgct gacgatgtcg actcggatgg tggtcatggc
     1861 tggtctcgct gtactcgacg gggttgggga tgcggaatgc gggaacgcgg aaaccggcgg
     1921 ccttggtgaa ccccgaaccc cgtcttgcgc atcccggaag gctatggctt acgccgcctt
     1981 cttggccccc atttcctcgc ccttcttgat cgcctcgtcg atgccgccga ccatgtagaa
     2041 cgcctgctcg ggcaggtagt ccacttcgcc gtcgacgatc atcttgaagc cgcggatggt
     2101 ttccttgagc ggcacgtact tgcccggcga gccggtgaac acttcggcca cgtggaacgg
     2161 ctggctgaag aagcgctcgc acttgcgcgc gcgggcgacg acctgcttgt cctcttcgga
     2221 gagctcgtcc atgccgagaa tggcgatgat gtccttgagc tccttgtagc gctgcaacgt
     2281 gccctgcacg cggcgggcga tgtcgtagtg ctcctggccg acgacctgcg ggtcgagctg
     2341 gcggctggtc gagtcgagcg gatccacggc cgggtagatg cccagcgagg cgatctggcg
     2401 cgacagggtc accgtggaat ccaggtgggc gaaggtggtg gccggcgacg ggtcggtcaa
     2461 gtcgtccgcg ggcacgtaca cggcctggat cgaggtgatc gaacc
//
LOCUS       DASSVL010000225         2799 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_202934, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000225 DASSVL010000000
VERSION     DASSVL010000225.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2799)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2799)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2799
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_202934"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1107
                     /locus_tag="VFM52_03825"
     CDS             <1..1107
                     /locus_tag="VFM52_03825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019463525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein GspD"
                     /protein_id="HET8764328.1"
                     /translation="ASPGGLGGVAGGPVSGTSYGNADAASRDQQFVSADGSIRISSVD
                     ANNQLMVRARPSQWAEIEAAVKRLDTIPLQVQIETRILEVNLTGEFQFGVQWYLQGLA
                     GSTSTTNSSGQTVFTPGHPSNPRQGAIGGGGNTYGGEPFFYSFLNNRMQVAVRAMEDN
                     GNTKTLSAPSLVVMNNQPAQIQVGNQVPINQNYITTGIGTGTSGFGAVGQVQYLNTGV
                     ILKVVPRVNPGGLVYLDISQEVSNPTTQDKNGNYTIADRSMQTQVAVQSGQTVLLGGL
                     IQQNEGIDDTGVPGLNRIPFLGRLFGTTSRSRSRTELIVLITPRVIRNSEEARQITDD
                     YQRGFESLRPLREGRATAPAAAPAGATQAVPLQH"
     gene            1285..>2799
                     /locus_tag="VFM52_03830"
     CDS             1285..>2799
                     /locus_tag="VFM52_03830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017463836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helicase-related protein"
                     /protein_id="HET8764329.1"
                     /translation="MSSTVPTFPITPLLPDILAALAAAPRLVLEAPPGAGKTTQVPLA
                     LLSAPWLAGKKIVVLEPRRIAARAAAQFMARQLGEDVGATVGYRIRFESRVSAATRVE
                     VVTEGILTRMLQDDPELPGVGAVLFDEFHERHLAGDLGAALALDVQAGLRGDLRLVVM
                     SATLDGERIARWFDAPRLTSPGRSYPVRIAWPPARAQETLDQHLLRTVRLALTENPGD
                     VLVFLPGRREIARAQALLEGTVAGDAEAVGRASARPLPDAGLKPDPQLRIEVVPLHGE
                     LSLAEQQAALSPAEPGTRRIVLATNVAESSVTAPGIRAVIDSGLAREPRFDPNSGFTR
                     LETVAIAQASADQRAGRAGRVAAGTAYRLWPQSKRLEPARTPEIAQVELSGLALELAA
                     WGSATLPWLDAPPSGALAQARELLGDLGALDLDGHITPLGRRMLALGATPRLAAAALR
                     APDNLQPLVADLLALMEARSPLRGEAARNDDFRVRVAALHAWRDRRAHGGSHGAL"
BASE COUNT          416 a          991 c         1022 g          370 t
ORIGIN      
        1 gccagcccgg gcggcctcgg cggcgtggcc ggcgggccgg tatcgggcac gagctacggc
       61 aacgcggacg cggccagccg ggatcagcag ttcgtctccg ccgacggcag catccgcatc
      121 agctcggtgg atgcgaacaa ccagctcatg gtgcgcgcgc gcccctcgca gtgggccgag
      181 atcgaggccg cggtgaagcg cctggacacc atcccgctgc aggtgcagat cgagacccgc
      241 atcctcgagg tgaacctcac cggcgagttc cagttcggcg tgcagtggta cctgcagggg
      301 ctggccggct ccaccagcac gaccaacagc agcggccaga cggtgttcac gccggggcac
      361 ccgtccaacc cgcgccaggg cgcgatcggt ggcggcggca atacctacgg cggcgagccg
      421 ttcttctact cgttcctcaa caaccgcatg caggtcgcgg tgcgcgcgat ggaggacaac
      481 ggcaacacca agacgctgtc ggcgccgtcg ctggtggtga tgaacaacca gccggcgcaa
      541 atccaggtcg gcaaccaggt gccgatcaac cagaactaca tcaccaccgg catcggcacc
      601 ggcaccagcg gcttcggcgc cgtgggccag gtgcagtacc tcaacaccgg cgtgatcctc
      661 aaggtcgtgc cgcgggtcaa cccgggcggc ctggtctacc tcgacatcag ccaggaagtg
      721 agcaacccga ccacccagga caagaacggc aactacacca tcgccgaccg cagcatgcag
      781 acccaggtgg cggtgcaaag cgggcagacc gtgctgctcg gcggcctgat ccagcagaac
      841 gagggcatcg acgacaccgg cgtgccgggc ctcaaccgca ttcctttcct cggccgcctg
      901 ttcggcacca ccagccgcag ccgcagccgc accgagctga tcgtgctgat caccccgcgc
      961 gtcatccgca acagcgagga agcccggcag atcaccgacg actaccagcg cgggtttgaa
     1021 tcgctgcggc cgctgcggga ggggcgggcg acggcaccgg ccgccgcgcc ggcgggcgcg
     1081 acgcaggcgg tgcccttgca gcattgagcg tgacgtgaaa accgcgcggt gatcgagacc
     1141 ggcaagggcg ctggcgcggg ccaatgcacc ggatgtggcc ggtgggtcgg gatccacttc
     1201 gactctccgc ccatatccgt ttcgggatgg atcccgaccc atgaagccag gctggcgcat
     1261 ggcggccggt atcatcggcg cgccatgagt tccactgtgc cgactttccc gattaccccg
     1321 ctgttgcccg acatcctggc cgcgctggcg gcggccccgc ggctggtgct ggaggcgccg
     1381 ccgggcgcgg gcaagaccac gcaggtgccg ctggcgttgc tcagcgcgcc gtggctcgcg
     1441 gggaagaaga tcgtggtgct ggagccgcgt cggatcgcgg cgcgcgcggc ggcgcagttc
     1501 atggcgcgcc agctcggcga agacgtcggt gcgacggtgg gctaccgcat ccgcttcgag
     1561 tcgcgggtga gcgcggcaac gcgggtcgag gtggtgaccg agggcatcct gacccgcatg
     1621 ctgcaggacg atcccgagct gccgggcgtg ggcgcggtgc tgttcgacga gttccacgag
     1681 cgccaccttg ccggcgacct tggcgcggca ttggcgctgg atgtgcaggc cggcctgcgc
     1741 ggcgatctgc gcctggtggt gatgtcggcg acgctggacg gcgaacgcat cgcacgatgg
     1801 ttcgatgcgc cgcggctcac cagccccggc cgcagctacc cggtgcgcat cgcctggccg
     1861 ccggcgcgcg cgcaggaaac cctcgaccag cacctgctgc gcacggtgcg cctggcgctc
     1921 accgagaacc ccggcgacgt gctggtgttc ctgccgggcc ggcgcgagat cgcgcgggcg
     1981 caggcgctgc tcgaaggcac cgtggcgggg gacgcggagg ctgtgggccg ggcttcggcc
     2041 cgaccgctgc cggatgccgg gctgaagccc gacccgcagc tgcgcatcga ggtcgtgccg
     2101 ctgcatggcg agctgtcgct ggccgaacag caggcggcct tgtcgcccgc ggagccgggc
     2161 acgcggcgca tcgtgctggc gaccaatgtc gccgagtcca gcgtgaccgc gccgggcatc
     2221 cgcgcggtga tcgacagcgg actcgcgcgc gagccgcggt tcgatcccaa ctcgggcttc
     2281 acccggctgg aaaccgtggc gatcgcgcag gcctcggccg accagcgcgc cggccgcgcg
     2341 ggacgcgtcg ccgccggcac ggcgtatcgc ctgtggccgc agagcaagcg cctggaaccc
     2401 gcgcgcacgc cggaaatcgc ccaggtggaa ctctcggggc tggcgctcga actcgcggcc
     2461 tggggcagcg caacgctgcc gtggctggac gcgccgccca gtggtgccct ggcgcaggca
     2521 cgcgagctgc tgggcgatct tggcgcgctg gatctggatg gccatatcac gccgctcggc
     2581 cggcgcatgc tggcgctggg cgcgacgccg cgcctggccg ctgccgcgtt gcgcgcgccg
     2641 gacaacctgc agccgctggt cgccgatctg ctggcgctga tggaggcgcg ctcgccgctg
     2701 cgtggcgagg cggcgcgcaa cgacgatttc cgcgttcgcg tggccgcgct gcacgcctgg
     2761 cgcgaccgtc gcgcgcatgg cggcagccac ggcgcgctg
//
LOCUS       DASSVL010000226         2678 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_499277, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000226 DASSVL010000000
VERSION     DASSVL010000226.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2678)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2678)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2678
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_499277"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..869
                     /locus_tag="VFM52_03835"
     CDS             <1..869
                     /locus_tag="VFM52_03835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HET8764330.1"
                     /translation="QSSLCMYPIYAYGSEEQRQRWLPDMAAGKVIGCFGLTEPHGGSD
                     PANMKTQAKRDGADWVLNGSKMWITNGNVADIAIVWAQTDDGIQGFVLEKGMTGFTAQ
                     EIKHKMSLRASVTSALFFDNVRVPDGNRLPNVKGLKGPLGCLTQARYGITWGPVGAAI
                     ACLDEALNYSKERILFDRPVAATQSAQLKLADMARRITTAQLLVLQLGRLKDAGKMQP
                     QQVSLAKWNNCRMAIDIARQCRDLLGGAGITTEHAAIRHALNLESVITYEGTETVHQL
                     VIGRELTGINAF"
     gene            881..1423
                     /locus_tag="VFM52_03840"
     CDS             881..1423
                     /locus_tag="VFM52_03840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007512833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HET8764331.1"
                     /translation="MDVRLETERLLLRIPEAGDFDRYAETLADPEAARYIGGQLTRAA
                     AWRRFLQMPGAWQVQGFGMFAIVEKSSGRWLGQAGPWKPVGWPGNEVGWSFHPDAWGR
                     GYATEAATAAIDWAFGNLGWDRVIHCIHPENTSSQKLAARLGSRNSGPAPLPEPYQDS
                     PNEIWTQTREEWRARRAGAA"
     gene            1420..2067
                     /locus_tag="VFM52_03845"
     CDS             1420..2067
                     /locus_tag="VFM52_03845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005911813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HET8764332.1"
                     /translation="MSMPTLYGFSPSGNCHKVRLLLEQLGRPYRWVETDSSRGATRTP
                     EFLALNPNGKVPLLALDDGRTLAESNAMLCWLAEGTDYLPADAWERAQALSWMFFEQY
                     SHEPYVAVARFIRGWTPADSPRRAELPRLRERGHQALAVMERHLLASPWFTGPRYGIA
                     DIALFAYTDVAGEGGFDLAPYPALRDWLARVRATPGFVPMAPPSAEAAALLALPD"
     gene            2094..>2678
                     /locus_tag="VFM52_03850"
     CDS             2094..>2678
                     /locus_tag="VFM52_03850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015447270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HET8764333.1"
                     /translation="MAVPNPIPARMKGLNRAEICDVNFQEYVRGFDGAAPRAKPAAGD
                     AILPGSALDARGFRELFESQLVSRHLDLMARVLRVQNKVFYTIGSSGHEGNAMVARLA
                     RHTDPAFLHYRSGGFMAERFRKLPGMDPVMDSALSFAASKDDPASGGRHKVWGSKPLW
                     VLPQTSTIASHLPKAFGTAVAIEQARRIGHALPIP"
BASE COUNT          414 a          971 c          916 g          377 t
ORIGIN      
        1 tgcagagctc gctgtgcatg tatcccatct acgcctacgg cagcgaggag cagcgccagc
       61 gctggctgcc cgacatggcc gcgggcaagg tcatcggctg cttcggcctg accgagccgc
      121 acggcggttc cgaccccgcc aacatgaaga cccaggcgaa gcgcgacggc gccgactggg
      181 tgctcaacgg ctccaagatg tggatcacca acggcaacgt ggccgatatc gcgatcgtct
      241 gggcgcagac cgacgacggc atccagggct tcgtgctcga gaaggggatg accggcttca
      301 ccgcccagga gatcaagcac aagatgtcgc tgcgcgcctc ggtcaccagc gcgctgttct
      361 tcgacaacgt gcgcgtgccg gacggcaacc gcctgccgaa cgtgaagggc ctgaaggggc
      421 cgctgggctg cctcacgcag gcccgctacg gcatcacctg gggtcccgtc ggcgcggcga
      481 tcgcctgcct cgacgaggcg ctgaactatt ccaaggaacg catcctgttc gaccgcccgg
      541 tcgccgcgac gcagagcgcg cagctcaagc tcgccgacat ggcccgccgc atcaccaccg
      601 cgcagctgct cgtgctgcag ctcggccgcc tcaaggacgc cgggaagatg cagccgcagc
      661 aggtgtcgct ggcgaagtgg aacaactgcc gcatggccat cgacatcgcg cggcagtgcc
      721 gcgacctgct cggcggcgcc ggcatcacca ccgagcacgc cgcgatccgc cacgcgctga
      781 acctcgagtc ggtgatcacc tacgagggca ccgagaccgt gcaccagctg gtcatcggtc
      841 gcgaactgac cggcatcaac gcgttctgag cggcgcgcgc atggacgtcc gcctcgaaac
      901 cgagcggttg ctgctgcgca tcccggaagc cggcgacttc gaccgctacg ccgaaacgct
      961 ggccgacccg gaagccgcgc gctacatcgg cggccagctc acccgcgccg ccgcctggcg
     1021 gcgcttcctg cagatgccgg gcgcgtggca ggtgcagggc ttcggcatgt tcgccatcgt
     1081 cgagaagtcc agcggccgct ggctcggcca ggccgggccg tggaagcctg tgggctggcc
     1141 gggcaacgag gtgggctggt cgttccatcc cgacgcatgg ggccggggct acgcgaccga
     1201 ggcggcgacg gcggcgatcg actgggcgtt cgggaatctc ggctgggacc gcgtcatcca
     1261 ctgcatccat ccggagaaca cgagctcgca gaagctcgcc gcgcggctgg gctcgcgcaa
     1321 cagcggcccc gcgccgctgc cggagccgta ccaggattcg ccgaacgaaa tctggacgca
     1381 gacccgggag gaatggcgcg cccgtcgcgc cggcgccgca tgagcatgcc gacgctttac
     1441 ggcttctcgc cgtcgggcaa ctgccacaag gtgcgcctgc tgctcgagca gctcgggcgc
     1501 ccctatcgct gggtcgagac cgacagcagc cgcggcgcca cgcgcacgcc ggaattcctc
     1561 gccctcaacc cgaacggcaa ggtgccgctg ctcgcgctgg acgacgggcg cacgctcgcc
     1621 gaatccaacg cgatgctgtg ctggctggcc gaaggcacgg attacctgcc ggccgacgca
     1681 tgggagcgcg cgcaggcgct gagctggatg ttcttcgagc agtacagcca tgaaccgtac
     1741 gtcgcggtcg cgcggttcat ccgcggctgg acgcccgccg attcgccgcg ccgggccgag
     1801 ttgccgcggc tgcgcgagcg cgggcaccag gcgctggcgg tgatggagcg gcacctgctc
     1861 gcgtcgccgt ggttcaccgg cccgcgctac ggcatcgccg acatcgcgct gttcgcctac
     1921 accgacgtgg cgggcgaggg cggcttcgat ctcgcgccgt accccgcgct ccgcgactgg
     1981 ctggcgcgcg tgcgcgcgac gccggggttc gtgccgatgg cgccgccgtc ggccgaagcg
     2041 gctgccctgc tcgcattgcc cgattgaccc actcacctcg agtccgattc gccatggccg
     2101 ttcccaatcc cattcccgcg cgcatgaaag gcctgaaccg ggccgagatc tgcgacgtca
     2161 acttccagga atacgtgcgc ggcttcgacg gcgcggcgcc gcgcgcgaag ccggcggcgg
     2221 gcgatgcgat cctgccgggc agcgcgctcg acgcgcgcgg cttccgcgag ctgttcgaat
     2281 cgcagctggt cagccgccac ctcgacctga tggcgcgcgt gctgcgcgtg cagaacaagg
     2341 tcttctacac gatcggctcg agcggccacg aaggcaacgc gatggtcgcg cgcctggccc
     2401 gccacaccga tcccgcgttc ctgcactacc gttctggcgg cttcatggcg gagcgcttcc
     2461 gcaagctgcc gggcatggac ccggtcatgg attcggcgct gtcgttcgcc gcgtcgaagg
     2521 acgatccggc ctccggcggc cggcacaagg tgtggggcag caaaccgttg tgggtcctgc
     2581 cgcagacgtc caccatcgcc tcgcacctgc ccaaggcctt cggcaccgcc gtggcgatcg
     2641 agcaggcgcg ccgcatcggc cacgcgctgc cgatcccc
//
LOCUS       DASSVL010000227         9251 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_174931, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000227 DASSVL010000000
VERSION     DASSVL010000227.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 9251)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9251)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9251
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_174931"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..667)
                     /locus_tag="VFM52_03855"
     CDS             complement(<1..667)
                     /locus_tag="VFM52_03855"
                     /inference="COORDINATES: protein motif:HMM:NF016101.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase family protein"
                     /protein_id="HET8764334.1"
                     /translation="MIDSPADPVQPTRRRFLGLAAATAAASLMPPALQRALAAPRPRG
                     GSLRDIRHVVLLMQENRSFDHYFGTLAGVRGFDDPDAPRLAAGRSVFHQPDPANPRGY
                     LLPFHLDTLATNAQRIPSNSHAWPVQHAAWHGGHMDGFVTAHRVQQNANAPYVMGYYQ
                     RADIPFHYALADLFTVCDAYHCSVLGPTWPNRMLWMTGTLDPDGVAGGPITSNVKARG
                     GYRW"
     gene            complement(789..1604)
                     /locus_tag="VFM52_03860"
     CDS             complement(789..1604)
                     /locus_tag="VFM52_03860"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017463219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HET8764335.1"
                     /translation="MPSLPITLAVIARNEAAVIARCLDSVPFAAEKLVVDSGSTDDTV
                     AVAQAHGARVVHQDWLGFGPQRNFATTQCGTDWILVLDADEWLSPELAAELERELPRL
                     MAGAAPAAYLRRNTVYMGAPLRWYRPGVGEKLARVYHRGRARWSDARVHESLQFAGRA
                     PVCKAPFNHANNPTLVHKQLKVLRYAELKCRDWLDKGKGARMWQAPFVYVLAFLKDYL
                     ARLAFLDGWRGFLIAQTAASYALYKRMRYYEMVKNPASVAQADAALRRHGLGD"
     gene            1784..3025
                     /locus_tag="VFM52_03865"
     CDS             1784..3025
                     /locus_tag="VFM52_03865"
                     /inference="COORDINATES: protein motif:HMM:NF016800.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-antigen ligase family protein"
                     /protein_id="HET8764336.1"
                     /translation="MDPVSALPASPPSPPPTPPLASAPRPLAFWRGVIGVGLGWMMLG
                     LVAMPAGISLNPGKAYQASLIALLYLPAWCMALTGRAATWRDLLPSWTFRLFLLLVGW
                     AAISLAWTTSGHLGDAASRLLSVVAFVLAWPIWIGTDERRVQRVLLGAGLAMALLAGW
                     YCLRYLWQPPADGRIVGDGVTATANYAAAVMGAAALWLSLLTPADWRVRAGRWLAVGV
                     LLVFVALTGSRSVWLALTLCALLAPFWHPGRPAWWLAGLTLLGGILCSLWPAQALVER
                     GASLRPQLLTESLQLIARHPWLGLGQGSDFTLIIDGIAYTHSHNVLTQTMIELGAPGL
                     VLLVALWCAVAWRGWRARTRTTGKLVLAVWLYASVVLQFDMPQLLDSPRPGWLLVWLP
                     LALALWLELDARRGRANAPLH"
     gene            3054..3992
                     /locus_tag="VFM52_03870"
     CDS             3054..3992
                     /locus_tag="VFM52_03870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008214024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucuronic acid decarboxylase family
                     protein"
                     /protein_id="HET8764337.1"
                     /translation="MSKVLVTGGAGFLGSHLCDRLVADGHDVLCVDNFFTGSKRNLAH
                     LIGRPYFELLRHDVTFPLYVEVERIFNLACPASPVHYQHDPVQTTKTSVHGAINMLGL
                     AKRVKARILQASTSEVYGDPEVHPQREEYWGRVNPIGLRSCYDEGKRCAETLFFDYHR
                     QHDLDIKVVRIFNTYGPRMHPNDGRVVSNFIVQALKGEDITLYGDGSQTRSFCYVDDL
                     IEAMVRMMETPAGFTGPVNIGNPGEYTMLELAETVLRLVGGHSQLVHQPLPADDPKRR
                     RPDITLAREKLGWEPKVALEDGLKETIAYFRKLLAG"
     gene            3995..4909
                     /locus_tag="VFM52_03875"
     CDS             3995..4909
                     /locus_tag="VFM52_03875"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008214022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HET8764338.1"
                     /translation="MADLPAFSVVVTNYNYREFVAEAVDGALAQTHAPREVIVVDDGS
                     TDGSPDYLRERYGADARVKLLCGENGGQLAAFQRGLAKAGGDVVCFLDADDRWGPDYL
                     RQVGAVFAARKDVDFVFSDVRLVGNEAGTRGYAKAAMDLGHTVLGTWVFARWYGAPTS
                     ALALRRTLAGRVLDLPPEFTANWRISADNCLVFGASVLGARKYFLPTGNVDYRIHGRN
                     GWWHEQARMREFPAQFRIRCLINFYAQRMHLDAHVLDLARAEFKTRERPDWAEARRYA
                     GIALRGPSPWWKRVERALSILGHGLRGS"
     gene            4917..5762
                     /locus_tag="VFM52_03880"
     CDS             4917..5762
                     /locus_tag="VFM52_03880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008214021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HET8764339.1"
                     /translation="MQVSVVVLTYNWPGALERLLASLAAQTRRPDEVIVADDGSGEAT
                     HALVERMARGFPVPLRHVWQEDRGFRAARARNRGIAASRGDYVILVDGDLLLHPYFVA
                     DHLMLAERGYFLQGGRIKATRAESARLLAGGTPVFAPWSRADFHEFDGTRRLYAFRQP
                     WLARWKSHSRSGGRVMSCNMSFWRDDLVRVNGFDERMEGYGAEDRELVARLENAGLRR
                     RALKWAALAVHLWHTSRAQPDVDDMSLPNNRLFHATRTQGITRCEQGIDGHLAEFPDS
                     RRKDV"
     gene            complement(5759..6724)
                     /locus_tag="VFM52_03885"
     CDS             complement(5759..6724)
                     /locus_tag="VFM52_03885"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015449017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HET8764340.1"
                     /translation="MSRPPRIQILARDNGAGLSRDLALLADALAETGADVQRTPLPHR
                     GRLAAWLTRLRLAGASPLYDWNLMLERVRPEFRNAATRNVLVPNPEYFRAQDRAALAA
                     IDQVWVKTRHAQRLFAALGKPVRYIGFTSPDRRDLSVPRTPTFFHGPGRSANKGTTAL
                     IALWARHPEWPLLTVAWRRKHVEPGALSANVRVIREHLDDAAYRALQNAHRFHLCPSQ
                     TEGFGHYLVEAMSCGAVVVTLDAEPMNELVTPARGVLVPARPAGTQDLATLYGFDDAD
                     MERAIARCVAMPADEAKALGAAARAWYEAGQEAFPRRLRAAFEDV"
     gene            complement(6721..8469)
                     /locus_tag="VFM52_03890"
     CDS             complement(6721..8469)
                     /locus_tag="VFM52_03890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008214019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HET8764341.1"
                     /translation="MLAFTAATPRERRDFWLFLLLALVILGAGIGLRDPWPSDEPRFA
                     LAAWQMVESGNWLFPHRGSELYADKPPMLMWLEAASFELTRIWRLAFMLPSLLASLGT
                     LVLVYDLGRRLWSRRTGLYAAGGLLLAFQFVYQGQRAQIDPLVVFFITAANWGLLRHL
                     LAPPGRATHWPAFWFGCFCAGLGVITKGVGFIALFMLVPYAWAALRGWDGVTHPGRGA
                     WWRWLLGLAAVLAAIALWLVPMLLVATARDADPTYAAYVHDILFKQTAKRYADAWHHL
                     HAWWYYLPILLFSWLPFSLLYPGCVPRWWCALKARDARVLLPLAWVVLVLAFFSASPG
                     KRDVYILPALPMLALACAPFVGELLPQRWLRAAGLVFIALLGALMLGAGWYALHGHAP
                     RVARFATDYGLTDGGAALWWMAIVLGVVQLALVAVLRLRHALLAVAAGMAALWLAWGF
                     WAVPQLNAASSSGALMAKVRSHLAPGDELGLVAWKEQNLLMLGRPAVDFGFKVPWHLQ
                     FARAVQWQAQAPATRWLFVQQPAMGRCVDRARAVDLGYANRREWWMFRADALVPGCLP
                     PASVDEAPDGETGAGL"
     gene            complement(8476..>9251)
                     /locus_tag="VFM52_03895"
     CDS             complement(8476..>9251)
                     /locus_tag="VFM52_03895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007808655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="16S rRNA (cytosine(967)-C(5))-methyltransferase
                     RsmB"
                     /protein_id="HET8764342.1"
                     /translation="LRVNRRRTTRAALIEQLHLDGQTAESHAWLADAIRLPHSVDVTR
                     LPGFADGLFAVQDGAAQVAADLVDAPAGARVLDACAAPGGKACHLLERADVELTALEF
                     DPQRVDRIRDNLRRLRLDARLLTGDAGEPKRWWDHQVFDRILIDAPCSATGVLRRRPD
                     VRLHRRAGDIAAMNAQQARILTALWPLLAPGGRLVYATCSLLRTENEGIVGPFLAAHA
                     DAEAVPFTLPVGQAAAVGWQILPGDGDLDGMYYAVLAKR"
BASE COUNT         1417 a         3316 c         3221 g         1297 t
ORIGIN      
        1 tccagcggta accgccgcgc gccttgacgt tgctggtgat cgggccaccg gccacgccgt
       61 cgggatcgag cgtgccggtc atccacagca tgcggttggg ccaggtcggc ccgagcaccg
      121 agcagtggta ggcgtcgcac acggtgaaca ggtcggccag cgcgtaatgg aacggaatgt
      181 cggcgcgctg gtagtagccc atcacgtacg gcgcgttggc gttctgctgc acgcggtgcg
      241 cggtgacgaa gccgtccatg tgcccgccgt gccacgccgc gtgctgcacc ggccaggcgt
      301 ggctgttcga cgggatgcgc tgcgcgttgg ttgccagcgt gtcgagatgg aacggcagca
      361 gatacccgcg cgggttggcc ggatcgggct ggtggaacac gctgcggccg gcggcgaggc
      421 gcggcgcatc ggggtcgtcg aacccgcgca cacccgccag cgtgccgaag taatggtcga
      481 aggaacggtt ctcctgcatc agcagcacga cgtggcggat gtcgcgcaac gagccgccgc
      541 gggggcgcgg cgcagccagc gcgcgctgca gcgccggcgg catcaggctg gccgctgcgg
      601 tggcggccgc caggccgaga aatcgccggc gggtcggttg tacggggtcg gcgggggaat
      661 cgatcacggc ggcatgcctg gggacgaacg gccgcagcct actcgcggat cacgccggca
      721 gcgcggccat ttccagacgg cttgcgcagc ggtccatcgt tgcctgcgcc gcgggcgacg
      781 gactgccgtc aatcgcccaa cccgtgccgg cgcagcgcgg catccgcctg cgcgaccgac
      841 gccgggttct tcaccatctc gtagtagcgc atgcgcttgt acagcgcgta gctcgccgcc
      901 gtctgcgcga tcaggaaccc gcgccagccg tcgaggaacg cgagtcgcgc gaggtaatcc
      961 ttgaggaacg ccagcacgta cacgaacggc gcctgccaca tgcgcgcgcc cttgcccttg
     1021 tccagccagt cacggcattt gagctcggca tagcgcagca ccttgagctg cttgtgcacc
     1081 agcgtggggt tgttggcgtg gttgaacggc gccttgcaca ccggcgcgcg gcccgcgaac
     1141 tgcagcgatt cgtgcacccg cgcgtcgctc cagcgcgcgc gcccacggtg gtagacgcgc
     1201 gccagcttct cgcccacgcc aggccggtac cagcgcagcg gcgcgcccat gtacaccgtg
     1261 ttgcggcgca ggtacgccgc cggcgccgcg ccggccatca ggcgcggcaa ttcgcgttcc
     1321 agctcggccg caagttccgg cgacagccat tcgtcggcat ccagcacgag gatccagtcg
     1381 gtgccgcact gcgtcgtcgc aaaattgcgc tgcgggccaa aacccagcca gtcctggtgc
     1441 accacgcgcg cgccatgcgc ctgcgccact gcgacggtgt cgtcggtcga acccgaatcc
     1501 accaccagct tctccgccgc gaacggcacg ctgtccaggc agcgcgcgat gacggccgcc
     1561 tcgttgcggg cgatgacggc gagggtgatg ggaagggagg gcatgccggg attctagcgg
     1621 cgcagccaac gcccacgaca cccggttccg aagcacgcgc ccgcgccagc ccaggcccgc
     1681 cccttggcga atccgcgacg tgcattcatc ctgtcgttgc cgcgcgtcgg ataccctgcc
     1741 tgccccaatg gaagtgcaac agatacctgt ccccgtgcgt atcatggacc ccgtttcagc
     1801 attgccggcc tcaccgccct cgcccccccc cacgccgcca ctggccagtg cgccgcgccc
     1861 gcttgcgttc tggcgcggcg tcatcggcgt cgggctcggg tggatgatgc tgggcctggt
     1921 cgccatgccg gccggcatct cgctcaatcc cggcaaggcc taccaggcca gcttgatcgc
     1981 gctgctctac ctgccggcct ggtgcatggc gctgaccgga cgcgccgcca cgtggcgcga
     2041 cctgctgcca agctggacgt tccggctgtt cctgctgctg gtcggctggg ccgcgatctc
     2101 gctcgcatgg accacgagcg gccaccttgg cgacgcggcg agccgcctgc tcagtgtggt
     2161 ggcgttcgtg ctggcctggc cgatctggat cggcaccgac gagcgccgcg tgcaacgcgt
     2221 gctgctgggc gccggactgg cgatggcgct gctcgccggc tggtactgcc tccgctacct
     2281 gtggcagccg ccggcggacg gccgcatcgt cggcgacggg gtcaccgcaa cggccaacta
     2341 tgccgcagcg gtgatgggcg ccgcggcgct gtggctgagc ctgctcacgc ccgccgactg
     2401 gcgcgtccgg gccggtcgct ggctcgccgt cggcgtgctg ctggtgttcg tcgcgctgac
     2461 cggctcgcgc agcgtctggc tggcgctcac cttgtgcgcc ttgctcgcgc cgttctggca
     2521 cccgggtcgc ccggcgtggt ggctggccgg gctgaccttg ctcggcggca tcctctgcag
     2581 cctgtggccg gcgcaggcgc tggtcgagcg tggcgcctcg ctgcgaccgc agttgctgac
     2641 tgaatcactg caattgatcg cccggcatcc gtggctgggg ctggggcagg gttccgattt
     2701 cacgctgatc atcgacggca tcgcctacac gcacagccac aacgtgctga cccagaccat
     2761 gatcgagctc ggcgcgccgg ggctggtgtt gctggtggcg ctgtggtgcg ccgtggcgtg
     2821 gcgcgggtgg cgcgcacgga cgcggaccac cggcaagctg gtcctcgccg tgtggctgta
     2881 cgccagcgtc gtgctgcagt tcgacatgcc gcaactgctc gacagcccgc gtcctggctg
     2941 gctgctggtg tggctgccgc tggcgcttgc gttgtggctg gagctcgacg cgcgccgcgg
     3001 ccgtgccaac gctcccttac actagccacc tcgcgtcccg ggacgacaac gcaatgtcca
     3061 aggtactggt gaccggcggt gccggttttc tcggttcgca cctgtgcgat cgcctcgtgg
     3121 ccgacggcca cgacgtgctg tgcgtggaca acttcttcac cggcagcaag cgcaacctcg
     3181 cgcacctgat cgggcgcccg tatttcgagc tgctgcgcca cgacgtcacg tttccgctgt
     3241 acgtggaggt ggaacgcatc ttcaacctcg cctgtccggc ctcgccggtg cactaccagc
     3301 acgacccggt gcaaaccacc aagacgtcgg tgcacggcgc gatcaacatg cttggcctgg
     3361 cgaaaagggt gaaggcgcgc atcctgcagg cctccaccag cgaggtgtac ggcgaccccg
     3421 aggtgcatcc gcagcgcgag gaatactggg gccgggtgaa cccgatcggg ctgcgcagct
     3481 gctacgacga gggcaagcgc tgcgccgaga cgctgttctt cgactaccac cgccagcacg
     3541 acctggacat caaggtggtg cgcatcttca acacctacgg cccgcgcatg catcccaacg
     3601 acggccgcgt ggtgagcaac ttcatcgtgc aggcgctgaa gggcgaggac atcaccctct
     3661 acggcgacgg cagccagacg cgcagcttct gctacgtgga cgacctgatc gaagcgatgg
     3721 tgcgcatgat ggaaaccccg gccggcttca ccggcccggt gaacatcggc aaccccggcg
     3781 agtacaccat gctggaactg gccgagaccg tgctgcgcct ggtcggcggc cactcgcaac
     3841 tggtgcacca gccgctgccg gcggacgacc cgaagcggcg gcggcccgac atcacgctgg
     3901 cccgcgaaaa actcggctgg gaaccgaagg tggcgctcga agacggcctc aaggagacca
     3961 tcgcctactt ccgcaagctg ctcgcgggct gaccatggcc gacctacccg cgttctcggt
     4021 cgtcgtcacc aactacaact accgcgaatt cgtcgccgag gcggtggatg gcgcgctggc
     4081 gcagacgcat gcgccgcggg aagtgatcgt ggtggacgac ggctcgaccg acggctcgcc
     4141 ggattacctg cgcgagcgct atggcgccga cgcgcgcgtg aagctgctgt gcggcgaaaa
     4201 cggcgggcag cttgcggcgt tccagcgcgg gctggcgaag gccggcggcg acgtcgtgtg
     4261 ctttctcgac gccgacgacc gctgggggcc ggactaccta cgccaggtcg gcgccgtgtt
     4321 cgccgcgcgc aaggacgtgg atttcgtgtt ctccgacgtg cgcctggtcg gcaacgaagc
     4381 gggcacccgg ggctacgcga aggcggcgat ggatctcggc cacaccgtgc tcggcacctg
     4441 ggtcttcgcg cgctggtacg gcgcacccac ctcggcgctg gcgctgcgcc gcacactggc
     4501 cggacgtgtg ctcgacctgc caccggagtt caccgccaac tggcgcatca gcgccgacaa
     4561 ctgcctggtg ttcggcgcca gcgtgctcgg cgcgcgcaag tatttcctgc ccaccggcaa
     4621 cgtcgattac cgcatccacg gtcgcaacgg ctggtggcac gaacaggcgc gcatgcgcga
     4681 gttccccgcc cagttccgca tccgctgcct gatcaacttc tacgcgcagc gcatgcacct
     4741 ggatgcgcac gtgctcgacc tggcacgcgc cgaattcaag acccgcgaac gccccgactg
     4801 ggccgaggcg cgccgctacg ccggcatcgc cctgcgcggg ccctcgccgt ggtggaagcg
     4861 cgtcgagcgc gcgttgtcca tcctgggtca cggcctgcgc ggaagctgag cccgtcatgc
     4921 aggtcagcgt cgtcgtgctc acctacaact ggcccggggc gctggaacgc ctgctggcca
     4981 gcctcgcggc acagacgcgg cggccggacg aggtgatcgt cgccgacgac ggttccggcg
     5041 aggccacgca cgcgctggtc gagcgcatgg cgcgcggctt cccggtgccg ctgcgccacg
     5101 tctggcagga ggatcgtggt ttccgcgccg cgcgcgcgcg caatcgcggc atcgcggcga
     5161 gccgcggcga ttacgtgatc ctcgtcgacg gcgacctgct gctgcacccg tatttcgtcg
     5221 ccgatcacct gatgctggcc gagcgcggct attttctgca gggcgggcgg atcaaggcca
     5281 cgcgcgcgga aagcgcgcgc ctgctggccg gcggtacgcc ggtattcgcg ccgtggtcgc
     5341 gcgccgattt ccacgagttc gacggcacca ggcggttgta cgcgttccgc cagccgtggc
     5401 tggcgcgctg gaaatcccac tcgcgcagcg gcggccgggt gatgagctgc aacatgagct
     5461 tctggcgcga cgacctggtg cgcgtgaacg gcttcgacga gcgcatggaa ggctacggtg
     5521 ccgaggatcg cgagctggtc gcgcggctgg aaaacgccgg cctgcgccgg cgcgcgctga
     5581 agtgggccgc gctcgcggtg cacctgtggc acacctcgcg cgcgcagccg gacgtggacg
     5641 acatgagcct gccgaacaac cgcctgttcc acgccacgcg cacgcagggc atcacgcgct
     5701 gcgagcaggg catcgacggc catctcgccg agtttccgga ttcccgacgg aaagacgtct
     5761 agacgtcctc aaatgctgcc cgcaagcgcc gtggaaaggc ctcctgcccg gcctcgtacc
     5821 acgcgcgcgc cgccgcaccc agcgccttgg cctcgtcggc cggcatggcc acgcaacgcg
     5881 cgatcgcgcg ctccatgtcg gcgtcatcaa agccgtaaag cgtggccagg tcctgcgtgc
     5941 cggccggacg cgccggcacc agcacgccac gcgcgggcgt caccagttcg ttcatcggct
     6001 cggcgtccag cgtcaccacc acggcgccgc agctcatcgc ctcgaccagg taatgaccga
     6061 aaccctcggt ctgcgacggg cacaggtgga agcggtgcgc gttctgcagc gcgcggtacg
     6121 ccgcgtcgtc gaggtgctca cggatcacgc gcacgttcgc cgacagcgcg ccgggctcca
     6181 catgcttgcg ccgccacgcg acggtaagca gcggccattc gggatgccgc gcccacagcg
     6241 cgatcagcgc cgtcgtgccc ttgttcgcgc tgcgcccggg gccatggaag aacgtcggcg
     6301 tgcgcggcac cgagagatca cgtcgatcgg ggctggtgaa gccgatgtag cgcaccggct
     6361 tgccgagcgc cgcgaacagg cgctgcgcgt ggcgggtctt cacccacacc tggtcgatcg
     6421 cggcgagcgc cgcgcgatcc tgcgcgcgga aatactccgg gttcggcacc agcacgttgc
     6481 gcgtggccgc gttgcggaat tccgggcgca cgcgctccag catcaggttc cagtcgtaca
     6541 gcggcgaggc accggcgagg cgcaggcggg tcagccatgc ggccagccgg ccacgatgcg
     6601 gcagcggcgt gcgctgcacg tccgcgccgg tttccgccag cgcgtcggcc agcagtgcga
     6661 gatcgcgcga aaggccggcg ccgttgtcgc gcgcgaggat ctggatgcgc ggcggccggc
     6721 tcacagcccg gcgccggttt cgccgtccgg cgcttcgtcc acggaggccg gcggcaggca
     6781 gcccggcacc agcgcatcgg cccggaacat ccaccactcg cggcggttcg cgtagccgag
     6841 gtcgaccgcc ctggcgcgat ccacgcaccg ccccatcgcc ggttgctgga cgaacagcca
     6901 gcgcgtggcc ggcgcctgcg cctgccattg cacggctcgg gcgaattgca ggtgccacgg
     6961 caccttgaag ccgaaatcca ccgccgggcg gcccagcatc aggaggttct gctccttcca
     7021 cgccacgagg ccgagttcgt cgcccggcgc gagatggctg cgcaccttcg ccatcagcgc
     7081 gccggacgag ctggccgcgt tgagctgcgg caccgcccag aagccccagg ccagccacag
     7141 tgcggccatg ccggcggcga cggccagcag cgcatggcgc aggcgcagca cggccaccag
     7201 cgcgagctgc acgacgccga gcacgatggc catccaccac agcgcggcgc cgccgtcggt
     7261 cagcccatag tcggtggcga accgcgccac cctgggcgca tgcccgtgca gcgcatacca
     7321 tccggccccc agcatcagcg cgcccagcaa ggcgatgaac acgagcccgg ccgcgcgcag
     7381 ccaacgctgc ggcaggagct cgccgacgaa cggcgcgcag gccagcgcaa gcatcggcaa
     7441 cgcgggcagg atgtacacat cgcgcttgcc cggcgaggcg ctgaagaacg ccagcaccag
     7501 caccacccac gccagcggca gcagcacgcg cgcgtcgcgc gccttcaatg cgcaccacca
     7561 gcgcggcacg cagccggggt agagcagcga gaacggcagc cagctgaaca acaggatcgg
     7621 caggtagtac caccacgcgt gaaggtggtg ccaggcatcg gcgtagcgct tcgcggtctg
     7681 cttgaacagg atgtcatgca cgtaggcggc ataggtcgga tcggcgtcgc gcgcggtcgc
     7741 gaccagcagc atcggcacca gccacaacgc gatcgccgcc agcaccgccg ccaggccgag
     7801 cagccagcgc caccacgcgc cacgccccgg atgcgtcacg ccatcccagc cgcgcagcgc
     7861 cgcccacgcg tagggcacca gcatgaacag cgcgatgaag cccacgccct tggtgatcac
     7921 gcccagcccg gcgcagaagc agccgaacca gaacgccggc cagtgcgtcg cgcgcccggg
     7981 cggcgccagc agatggcgca gcaggcccca gttcgccgcg gtgatgaaga acaccaccag
     8041 cggatcgatc tgcgcgcgct ggccctggta gacgaactgg aacgccagca gcaggccgcc
     8101 ggccgcatac aggccggtgc gccggctcca caaccgccgg ccgaggtcgt acaccagcac
     8161 cagggtgccg agcgacgcca gcagcgacgg cagcatgaag gcgaggcgcc aaatgcgggt
     8221 cagctcgaag ctcgccgctt cgagccacat cagcatcggc ggcttgtcgg cgtacagctc
     8281 gctgccgcgg tgcggaaaca gccagttgcc gctctctacc atctgccagg cggccagcgc
     8341 gaagcgcggc tcgtccgacg gccaggggtc gcgcaggcca atgccggcgc cgaggatgac
     8401 cagcgccagc agcaggaaca gccagaaatc gcgccgttcc cggggcgtgg cggcggtgaa
     8461 tgcgagcatg gtcagtcagc gcttggcgag caccgcatag tacatgccgt cgaggtcgcc
     8521 atcgccaggc aggatctgcc agccgaccgc ggcggcctgg ccgacgggca gcgtgaacgg
     8581 caccgcttcg gcatccgcgt gcgcggcgag gaacggcccg acgatgccct cgttctccgt
     8641 gcgcagcagc gagcaggtgg cgtagacgag cctgccgccc ggcgcaagca gcggccacag
     8701 tgcggtgagg atgcgcgcct gctgcgcgtt catcgcggca atgtcgcccg cacgccgatg
     8761 caggcgcacg tccggacggc ggcgcagcac gccggtggcc gagcacggcg cgtcgatcag
     8821 gatgcggtcg aacacctgat ggtcccacca gcgcttcggc tcgccggcat cgccggtgag
     8881 cagccgcgca tcgagccgca gccggcgcag gttgtcgcgg atgcggtcga cgcgctgcgg
     8941 gtcgaattcc agcgcggtca gttcgacgtc ggcacgttcg agcaggtgac aggccttgcc
     9001 gccgggcgcg gcgcaggcat ccagcacgcg cgcgccggcc ggcgcgtcga cgaggtcggc
     9061 ggcgacctgc gcggcgccgt cctgcaccgc gaacaggcca tcggcaaagc cgggcaggcg
     9121 ggtcacgtcc acgctgtgcg gcagccggat ggcgtcggcc agccacgcat gcgattcggc
     9181 cgtctggccg tccagatgca actgctcgat caacgccgcg cgcgtggtgc ggcgccgatt
     9241 cacgcgcagc a
//
LOCUS       DASSVL010000228         2642 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_626766, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000228 DASSVL010000000
VERSION     DASSVL010000228.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2642)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2642)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2642
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_626766"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..488
                     /locus_tag="VFM52_03900"
     CDS             <1..488
                     /locus_tag="VFM52_03900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008436535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HET8764343.1"
                     /translation="AIAALLHDAIEDGGAAQVEAIRGAFGERVLAIVLGCTDGTAESK
                     AAQHGAEAKRRNWLARKQAYLAHLAGAADDVLLVSGCDKLHNARAVVGDLDDPAVGAA
                     VFGRFTGGRDGTLVYYRLLADLFTQRKAPMARALEIAVDRMYRLAGEPVPPADLALAA
                     A"
     gene            571..960
                     /gene="rsfS"
                     /locus_tag="VFM52_03905"
     CDS             571..960
                     /gene="rsfS"
                     /locus_tag="VFM52_03905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007804683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0017148 - negative regulation of
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome silencing factor"
                     /protein_id="HET8764344.1"
                     /translation="MSTSRKTKTDPVAILRKAVVAALEELKAKDVREIDVRGRTSIAD
                     FLVFASGTSARHVKSIADEVVKYAKRAGMPPLGVEGEESAEWVLVDLGDVIVHVMLPR
                     VREFYGLERFWSLGGDREPDADAAQAG"
     gene            976..1446
                     /gene="rlmH"
                     /locus_tag="VFM52_03910"
     CDS             976..1446
                     /gene="rlmH"
                     /locus_tag="VFM52_03910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014161074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (pseudouridine(1915)-N(3))-methyltransferase RlmH"
                     /protein_id="HET8764345.1"
                     /translation="MHARLIAVGERMPAWVADGFAEYRKRLSHDLPLDLVELKPGTRG
                     KGRDDVRAIHDEGVEMLAALPRDAHVVALDGRGKTWSSEELAAQLKGWRMAGRDLAFL
                     IGGPDGHAPAVLARADQRWSLGPLTLPHMLVRLVLAEQLYRAVTILAGHPYHRG"
     gene            1514..2083
                     /locus_tag="VFM52_03915"
     CDS             1514..2083
                     /locus_tag="VFM52_03915"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008214897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Maf family protein"
                     /protein_id="HET8764346.1"
                     /translation="MLYLASQSPRRRELLVQLGVPFEIVTVAVPEVPQVKESPREYVS
                     RVARDKARAGLAACKGIADAVVLGADTEVVLDDEVFGKPRDAHDAAAMLHRLSGRVHE
                     VVSTLWLLKGRRERTATCVSQVRFAELDPATIAAYVATGESLGKAGAYAIQGRGAALI
                     EHLDGSYSGVMGLPLFETAALLREARVIA"
     gene            2093..2383
                     /locus_tag="VFM52_03920"
     CDS             2093..2383
                     /locus_tag="VFM52_03920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019300778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-hairpin-helix domain-containing protein"
                     /protein_id="HET8764347.1"
                     /translation="MHPSRVVRENLRRFTDLPNIGPSLARDFALLGYDEPGQLAGIDP
                     LALYHALCAATGVRQDPCVLDVFMAVADFLDGGAPQPWWHFTAERKRRHGQL"
     gene            complement(2405..>2642)
                     /locus_tag="VFM52_03925"
     CDS             complement(2405..>2642)
                     /locus_tag="VFM52_03925"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007082861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0071586 - CAAX-box protein processing
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="CPBP family intramembrane glutamic
                     endopeptidase"
                     /protein_id="HET8764348.1"
                     /translation="ALLRRMRPLAAVLVSALVFAAAHLPDLHWLWYGVPNLALLGIAF
                     AWLRLRSGSLWPAIVAHACNNLLVMATLFTANGG"
BASE COUNT          376 a          919 c          952 g          395 t
ORIGIN      
        1 aggcgattgc cgcgctgctg cacgatgcca tcgaggacgg cggcgcggcg caggtggagg
       61 cgatccgcgg cgcattcggc gaacgcgtgc tggccatcgt gctcggctgc accgatggca
      121 cggcggagag caaggccgcg cagcacggcg cggaggcgaa gcggcgcaac tggctcgccc
      181 gcaagcaggc gtacctcgcc catctcgcgg gcgccgcgga tgacgtgctg ctggtttccg
      241 gctgcgacaa gctgcacaac gcgcgtgcgg tcgtcggcga cctggacgat cccgccgtgg
      301 gtgctgccgt gttcggccgc ttcaccggtg ggcgcgacgg cacgctggtg tattaccggc
      361 tgctggcgga tctgttcacc cagcgcaagg caccgatggc gcgcgcactc gaaatcgcgg
      421 tggaccgcat gtaccggctc gccggcgaac cggtgccgcc cgccgacctg gcgctggcgg
      481 cggcctgacg cggcggttga tccgcgatca cgggggcgac ggtatacttt ggctcgccgt
      541 ccgccctgag ctcgcccgag gcagccccat ttgagcacta gccgcaagac caagaccgac
      601 ccggtggcca tcctgcgcaa ggcggtcgtc gccgcactgg aagaactgaa ggccaaggac
      661 gtccgcgaga tcgacgtgcg cggccgcacc tcgatcgccg atttcctggt gttcgcctcc
      721 ggcacctcgg cgcggcacgt caagtccatc gccgacgaag tggtgaagta cgccaagcgc
      781 gcaggcatgc cgccgctcgg cgtcgaaggc gaggagtccg cggagtgggt gctggtcgat
      841 ctcggcgacg tgatcgtgca cgtcatgctg ccgcgcgtgc gcgagttcta cggcctcgaa
      901 cgcttctggt cgctgggcgg tgaccgcgag cccgatgcgg atgccgcaca ggccggctga
      961 gcgcacgccg gcaccatgca cgcgcgcctg atcgccgtcg gcgaacgcat gccggcgtgg
     1021 gtcgccgatg gtttcgccga gtaccgcaag cggctgtcgc acgacctgcc tctggacctg
     1081 gtcgagctca agcccggcac ccgcggcaag ggccgcgacg atgtgcgcgc gatccacgac
     1141 gaaggcgtgg agatgctggc ggcgttgccg cgcgacgcgc acgtcgtcgc cctcgatggc
     1201 cgcggcaaga cctggtcgag cgaggaactg gccgcgcagc tcaagggctg gcgcatggcc
     1261 ggccgcgacc tggcctttct catcggtggg ccggatggcc acgcgcccgc ggtgcttgca
     1321 cgcgccgacc agcgctggtc gctcggccca ctgacgctgc cgcacatgct ggtgcgcctg
     1381 gtgctggcgg aacagctgta tcgcgccgtc accatcctcg ccgggcatcc ctaccaccgc
     1441 ggttgacggc cttgcgcgcg gcgccgtgcg gccgcatgtt gcacgctgtc catcgatccg
     1501 gcaggacgct tgcatgctct atctcgcttc ccagtcgccg cgccgccgcg agctgctcgt
     1561 gcagctgggc gtgccgttcg agatcgtcac cgtcgcggtg cccgaggtgc cgcaggtgaa
     1621 ggagtcgccg cgcgaatacg tgagccgcgt ggcgcgcgac aaggcgcgcg ccgggctggc
     1681 cgcctgcaag ggcatcgccg atgccgtggt gctcggcgcc gataccgagg tggtgctcga
     1741 tgacgaggtg ttcggcaagc cgcgcgacgc gcacgatgcg gcagccatgc tgcaccggct
     1801 atccggccgc gtgcacgagg tcgtttccac gctgtggctg ctcaagggcc ggcgcgagcg
     1861 taccgcgacc tgcgtgtcgc aggtgcgctt tgccgagctc gacccggcca cgatcgcggc
     1921 ctacgtcgcc accggcgaat cgctgggcaa ggccggcgcg tatgcgatcc agggccgcgg
     1981 cgcggcgctg atcgagcatc tcgacggcag ctattccggg gtgatgggcc tgccgctgtt
     2041 cgagaccgcg gcgctgctgc gcgaggcgcg cgtgatcgcg tagcatcgcg cgatgcatcc
     2101 ctcccgcgtc gtgcgcgaaa acctccgccg cttcaccgac ctgccgaaca tcggcccgtc
     2161 gttggcgcgc gatttcgcct tgcttggtta tgacgagccc ggccaattgg cgggcatcga
     2221 tccgctcgcg ctgtaccacg cgctgtgtgc cgccaccggt gtgcgccagg atccgtgcgt
     2281 gctcgatgtg ttcatggcgg tcgcggattt cctcgatggc ggcgcaccgc agccgtggtg
     2341 gcatttcacc gccgagcgca agcgaaggca cgggcagttg taggccgcgc ggcctgctgc
     2401 gcactcaacc gccgttggcg gtgaacagcg tcgccatcac cagcaggttg ttgcaggcgt
     2461 gggcgacgat cgccggccac agcgagcccg agcgcagccg cagccaagcg aaggcgatac
     2521 cgagcagggc gaggttcggc accccgtacc acaaccagtg caggtcgggc aggtgcgccg
     2581 ccgcaaacac cagcgcgctc accagcacgg cggcgagcgg gcgcatccgg cgcagcagcg
     2641 cg
//
LOCUS       DASSVL010000229         2568 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_527809, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000229 DASSVL010000000
VERSION     DASSVL010000229.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2568)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2568)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2568
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_527809"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..492
                     /locus_tag="VFM52_03930"
     CDS             <1..492
                     /locus_tag="VFM52_03930"
                     /EC_number="6.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019465827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004639 -
                     phosphoribosylaminoimidazolesuccinocarboxamide synthase
                     activity [Evidence IEA];
                     GO_process: GO:0006164 - purine nucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylaminoimidazolesuccinocarboxamide
                     synthase"
                     /protein_id="HET8764349.1"
                     /translation="RLPAGLNQAQQLPEPIFTPSTKEEVGTHDQNVSFEAMANKVGRE
                     LAGKVREATLAIYTWAAAYAAERGILIADTKFEFGTDEDGKLYVMDEMLTPDSSRFWP
                     AESYRTGISPPSYDKQFVRDWLETQPWNKTAPGPVIPDEIIARTAAKYAEALERLAGI
                     RLG"
     gene            497..802
                     /locus_tag="VFM52_03935"
     CDS             497..802
                     /locus_tag="VFM52_03935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007081251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux SMR transporter"
                     /protein_id="HET8764350.1"
                     /translation="MNAWLPPGAAIVAEATGASALKASAGFSRPPSGVAVRLGCGAAF
                     HFPGLALRQIPVGIACAVWSGTGTVLITFIGVFVARQKIDATGVPALNQRSPSGVRG"
     gene            799..1290
                     /locus_tag="VFM52_03940"
     CDS             799..1290
                     /locus_tag="VFM52_03940"
                     /inference="COORDINATES: protein motif:HMM:NF017897.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mpo1-like protein"
                     /protein_id="HET8764351.1"
                     /translation="MTLPPPPDAQRLQAWLDQYGRDHVHPANRALHALCVPLATWSLI
                     AMLWTLPVPQRWLQPGAWAVLAIVLTFYWYWKRSRTLAAALLAGFGGLALASRGAAQV
                     LGNQRLFVLAAVVLVLAGFAQLIGQRLKGRRLRLPTQPAQLLIGPAWWMAALLHRLGI
                     RSP"
     gene            1287..1691
                     /locus_tag="VFM52_03945"
     CDS             1287..1691
                     /locus_tag="VFM52_03945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007807369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8764352.1"
                     /translation="MNLLALASSLVWWILFGSIAAAAVALVAWLVLRWSERGNVVFNR
                     VYLASLVWTLLGGVLFAAVAAHEGRLQPPYRPLLGTPLLQWTLVLDMLVGATLIWRLT
                     PRVDAHRIRLGSACLAAAVVVAIGFGVATTLL"
     gene            complement(1852..1926)
                     /locus_tag="VFM52_03950"
     tRNA            complement(1852..1926)
                     /locus_tag="VFM52_03950"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1892..1894),aa:Gln,seq:ctg)
     gene            complement(1938..2330)
                     /gene="rpsI"
                     /locus_tag="VFM52_03955"
     CDS             complement(1938..2330)
                     /gene="rpsI"
                     /locus_tag="VFM52_03955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020292946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S9"
                     /protein_id="HET8764353.1"
                     /translation="MAIQQQYGTGRRKTSAARVFLRKGTGAIEVNGKPLDQFFGRETS
                     RMIVRQPLALTENTDKFDIKVTVEGGGITGQAGAIRLGIARALVEYDESLKVALRKAG
                     FVTRDARAVERKKVGLHKARRATQFSKR"
     gene            complement(2340..>2568)
                     /locus_tag="VFM52_03960"
     CDS             complement(2340..>2568)
                     /locus_tag="VFM52_03960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006451009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="uL13 family ribosomal protein"
                     /protein_id="HET8764354.1"
                     /translation="KLQDKQYHRFTGYVGNLKTTNLEDLLATHPERAIEFAVKGMLPK
                     NPLGRAMYRKLKVYGGAEHPHAAQQPQALEI"
BASE COUNT          363 a          901 c          864 g          440 t
ORIGIN      
        1 aggcttcccg ccggtctgaa ccaggcgcag caactgccgg aaccgatctt caccccgtcc
       61 accaaggaag aggtcggcac ccacgaccag aacgtcagct tcgaggccat ggcgaacaag
      121 gtcggccgcg agctggccgg caaggtgcgc gaggccacgc tcgccatcta cacctgggcc
      181 gcggcgtatg cggccgaacg cggcatcctc atcgccgaca ccaagttcga gttcggcacc
      241 gacgaggacg gcaagctgta cgtgatggac gagatgctca cccccgattc ctcgcggttc
      301 tggccggcgg agagctaccg caccggcatc agcccgccga gctacgacaa gcagtttgtg
      361 cgcgactggc tggaaaccca gccgtggaac aagaccgcgc ccggtccggt gatcccggac
      421 gagatcattg cccgcacggc agccaagtac gccgaggcgc tggagcggct ggccggcatc
      481 cgcctcggct gaacgcgtga acgcgtggct gccgccgggc gcggcgatcg tcgcggaagc
      541 gaccggcgcc agcgcgctca aggccagcgc gggcttcagt cgcccgccgt ctggcgtcgc
      601 ggtgcggctc ggctgcggcg cggcgttcca tttcccgggc ctcgccctgc ggcagatccc
      661 ggtcggcatc gcctgtgccg tgtggtcggg caccggcacg gtgctcatca ccttcatcgg
      721 cgtcttcgta gcccggcaga agatcgacgc gaccggcgtg ccggcactca accagcggtc
      781 cccaagcggc gtacgcggat gacgctgccg ccgcccccgg acgcgcaacg cctgcaggcc
      841 tggctcgacc agtacggtcg cgaccacgtc cacccggcca accgcgcgct gcacgcgctc
      901 tgcgtgccgc tcgccacgtg gtcgctcatc gcgatgctgt ggacgctccc ggtaccgcaa
      961 cgctggctgc aacccggcgc gtgggcggtg cttgcgatcg tgctgacgtt ctactggtac
     1021 tggaagcgct cgcgcacgct ggcggcggcg ctgctcgccg gctttggcgg gctggcgctg
     1081 gccagccgcg gtgcggccca agtacttggc aatcagcgct tgttcgtcct cgccgccgtt
     1141 gtcctcgtgc tggccggatt cgcccagctc attggccagc gactgaaagg ccggcggcta
     1201 cgcctgccaa cccagcccgc acagctcctg attggccccg cctggtggat ggccgcgctg
     1261 ctgcaccgcc ttggaatccg cagcccatga acctcctcgc cctcgccagc agcctcgtct
     1321 ggtggatcct gttcggcagc atcgccgccg ccgcggtggc gctcgtcgcc tggcttgtat
     1381 tgcgctggtc cgaacgcggc aacgtggtgt tcaaccgggt ctacctggcg agtctggtgt
     1441 ggacgctgct cggtggcgtg ctgtttgccg ccgtcgcggc gcacgaaggc cgcctgcaac
     1501 cgccgtatcg cccgctcctc ggcacgccgc tgctgcaatg gacgctggtg ctcgacatgc
     1561 tggtcggcgc cacgctcatc tggcgcctga ccccgcgcgt ggacgcgcat cgcattcgcc
     1621 tgggcagcgc gtgtctggcc gccgccgtgg tggtggccat cggtttcggc gtggccacca
     1681 cgttgctcta gtgcccagcc ggcacgacca acgagcggag caaaccgccc tcgcacccgc
     1741 catcgcacgg cccctcgccg tcaccaccgt tccgccgagc cagcccctga ttcggcgtcc
     1801 tggcggtggc acacgcaaaa agcccgcctt gcggcgggct ttttgcgtgg ctggcagccc
     1861 cggaaggatt cgaacctccg aatgcctgag tcagagtcag gtgccttacc gcttggcgac
     1921 ggggctgtat gtgaagctta gcgcttggag aactgggtgg cgcggcgggc cttgtgcaga
     1981 ccgaccttct tgcgctcgac ggcgcgggcg tcacgggtga cgaaaccggc cttgcgcagg
     2041 gcgaccttga ggctctcgtc gtattcgacc agggcacggg caatgccgag gcggatcgcg
     2101 ccggcctggc cggtgatgcc accgccctcg accgtgacct tgatgtcgaa cttgtcggtg
     2161 ttctcggtca gcgccagcgg ctggcgcacg atcatgcgcg aggtctcgcg gccgaagaac
     2221 tggtcgagcg gcttgccgtt cacctcgatt gcgccagtgc ccttgcgcag gaacacgcgg
     2281 gcggcggagg tcttgcggcg gccggtgccg tattgctgct gaatcgccat gatggttcct
     2341 taaatctcca gcgcttgcgg ctgctgagcg gcgtgcggat gctccgcacc accgtacacc
     2401 ttgagcttgc ggtacatcgc acggcccagc gggttcttcg gcagcatgcc cttgacggcg
     2461 aattcgatcg cgcgctcggg atgggtcgcc agcagatcct cgaggttggt ggtcttcagg
     2521 ttgccgacgt agccggtgaa gcgatggtac tgcttgtcct gaagcttg
//
LOCUS       DASSVL010000230         3914 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_118061, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000230 DASSVL010000000
VERSION     DASSVL010000230.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3914)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3914)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3914
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_118061"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            40..396
                     /locus_tag="VFM52_03965"
     CDS             40..396
                     /locus_tag="VFM52_03965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017460227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004518 - nuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YraN family protein"
                     /protein_id="HET8764355.1"
                     /translation="MRERGARFERRAAAELERAGLKTLARNYTTRHGELDLVMLDGAT
                     IAFVEVRQRAHAGHGDALASITRSKRDKLIRTAQLWLAANPSHAHRTCRFDVVTFDGG
                     GDDANAHWLRGAFEAD"
     gene            422..1795
                     /locus_tag="VFM52_03970"
     CDS             422..1795
                     /locus_tag="VFM52_03970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012479147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-linked oxidase C-terminal domain-containing
                     protein"
                     /protein_id="HET8764356.1"
                     /translation="MALTVPALAALRDLFPAPRLVTDADQRAAFGHDHSRCVGTPDAV
                     VLPTTHAEVEALVRLCRTHRIALTARGGGTSSTGAAVPLAGGIVASFEHMQRVLRIDP
                     DNRLAVVEPGVTNGTLQQALAPHGFFWAPDPGSAPWCTVGGNLACNAGGPHAVKYGTT
                     RDNVLGLRAVAGTGAGFRCGTQTTKDSTGYDLTRLLVGSEGTLAVITEATLKLTPKPP
                     AVRSLRASYASPDAAAQAVARIMAQATTPCALEFMDALALRLARDTHPDAGVPDAEAL
                     LIIEVDGEDATIDVAAAAVARAARGAGLEALHVARDAGENAALWAARKALSQAQQQVT
                     THKINEDGVVPVSRLPELVRGVHALAQRHTVPVVSFGHAGNGNLHVNFLPRDEAEIAR
                     AETALPELFQLVVALDGTLSGEHGIGRVKRDYLPLAVDAGALGLMHAVKAAFDPDGIL
                     NPGKVLP"
     gene            1792..2430
                     /locus_tag="VFM52_03975"
     CDS             1792..2430
                     /locus_tag="VFM52_03975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007509368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase family protein"
                     /protein_id="HET8764357.1"
                     /translation="MNHAEPFDRLMARIRACTICAAHLPLGSRPVLQASPTSRLLVTS
                     QAPGRKVHETGIPFNDISGNRLREWMGIDRETFYDPAQVAIIPMGFCYPGTGKGGDLP
                     PRPECAPTWHPQLLPRLTQLQLTLAIGQFALTGMLGREHCAKKLTDTVRAWRDHLERA
                     RVLPLPHPSPRNKLWMKRNPWFEAELLPVLRARVAAALAPAPAPRKHPVHRS"
     gene            complement(2443..3024)
                     /locus_tag="VFM52_03980"
     CDS             complement(2443..3024)
                     /locus_tag="VFM52_03980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020456025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysE family transporter"
                     /protein_id="HET8764358.1"
                     /translation="MSPGPDFFYVSQTAASRSRRDALAGVAGIALGVAIWAALALAGL
                     TWLFARASVLAQVVAVAGGAYLVWMGAHLLRAGLQPAPAAGNGAPVPAANARQALRAG
                     LATNLSNPKVVVYFGSIFAAFIRTPLAVGARWGLWLMIVAETLAWFALVASVFALPRV
                     RAGYLRARRFVDGGAGLVFIGFGLELVATRGAF"
     gene            3185..>3914
                     /locus_tag="VFM52_03985"
     CDS             3185..>3914
                     /locus_tag="VFM52_03985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007509370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HET8764359.1"
                     /translation="MSLKLRLIVMNFLQFYIWGAWLLTIGTWWFHTQHWSGTSFGAIF
                     STMGIASLFMPSIAGIIADKWINAERLYGLFQILGALVLLALPLVGDPRLMFWVMLLN
                     MCFYMPTIALSIAVAYNALKQDGLDVVVAYPPIRVWGTVGFIAATWTVSLLGFEASAT
                     QFHVAAGASLLLGLYAFTLPKCPPKLDAAHSRTLVDRLGLTSFVLFKNRNMAVFFIFA
                     MLLGAALQLTNAYGDTFLKDFAKVP"
BASE COUNT          599 a         1475 c         1296 g          544 t
ORIGIN      
        1 ggcgccggcc agcagcaccg tcccggcgaa cgccggctga tgcgcgagcg cggcgcccgc
       61 ttcgaacgtc gcgccgccgc cgaactggag cgtgccgggc tgaagacgct ggcgcgcaac
      121 tacaccaccc gccacggcga actcgacctg gtgatgctcg acggcgccac catcgccttc
      181 gtcgaagtgc gccagcgcgc gcatgccggg cacggcgacg cgctcgcctc gatcacccgc
      241 agcaagcgcg acaagctgat ccgcaccgcg caactgtggc tggccgccaa cccgtcccac
      301 gcgcaccgca cctgccggtt cgacgtggtg accttcgacg gcggcggcga cgacgccaac
      361 gcgcactggc tgcgcggcgc gttcgaggcc gactgaggcg gcggcgcatt atcctgtacg
      421 catggccctg accgtccctg cactcgccgc cctgcgcgac cttttccccg ccccccgcct
      481 cgtcaccgat gccgaccagc gcgccgcctt cggccatgac cactcgcgct gcgtcggcac
      541 gccggacgcg gtggtcctgc cgaccacgca cgccgaggtc gaagcgctgg tgcggctgtg
      601 ccgcacgcac cgcatcgcac tcaccgcgcg cggcggcggc accagttcca ccggcgccgc
      661 ggtaccgctc gccggcggca tcgtcgccag tttcgagcac atgcagcggg tgttgcgcat
      721 cgacccggac aaccgcctcg cggtggtcga gccgggggtg acgaacggga cgctgcagca
      781 ggcgctggca ccacacgggt tcttctgggc gcccgatccc ggctcggcgc catggtgcac
      841 ggtgggcggc aacctcgcgt gcaacgccgg cgggccgcac gccgtgaagt acggcaccac
      901 gcgcgacaac gtgctcggcc tgcgtgcggt ggccggcacc ggcgcgggtt tccgctgcgg
      961 cacgcagacc acgaaggact cgaccggcta cgacctgacc cgtctcctgg tcggttcgga
     1021 aggcacgctg gcggtcatca ccgaggccac gctcaagctc acgccgaaac cacccgcggt
     1081 gcgcagcctg cgcgccagct acgccagccc ggatgcggcg gcgcaggcgg tggcgcggat
     1141 catggcgcag gccaccacgc cgtgcgcgct cgaattcatg gacgcgctgg cgctgcggct
     1201 cgcgcgcgac acccatcccg atgccggcgt gccggatgcc gaggcgttgc tgatcatcga
     1261 ggtggacggt gaagacgcca ccatcgacgt cgccgccgcc gcggtcgcgc gtgcggcgcg
     1321 cggcgccggc ctcgaggcgc tgcacgtggc ccgcgacgcg ggcgagaacg cggcgttgtg
     1381 ggccgcgcgc aaggcgctgt cgcaagccca gcagcaagtc accacgcaca agatcaacga
     1441 ggacggggtg gtgccggtca gccgcctgcc cgaactggtg cgcggcgtgc acgcgctggc
     1501 gcagcgccac accgtgccgg tggtgagttt cggtcacgcc ggcaacggca acctgcacgt
     1561 gaatttcctg ccgcgcgacg aagcggaaat cgcgcgcgcg gaaaccgcgt tgccggagct
     1621 gttccagctg gtcgtggcgc tggacggcac gctctccggc gagcacggca tcggccgggt
     1681 caagcgtgac tacctgccgc ttgccgtcga tgccggcgcc ctgggattga tgcacgcggt
     1741 gaaggccgcg ttcgatcccg acggcatcct caatccgggc aaggttttgc cgtgaaccac
     1801 gccgaaccct tcgatcgcct catggcgcgc atccgcgcct gcacgatctg cgcggcacac
     1861 ctgccgctcg ggtcgcgccc ggtgctgcag gcgtcaccca cctcgcggct gctggtcacc
     1921 agccaggcac cggggcgcaa ggtgcacgag accggcatcc cgttcaacga catttccggc
     1981 aaccgcctgc gcgagtggat gggcatcgac cgcgagacct tctacgaccc cgcgcaggtc
     2041 gccatcatcc cgatgggctt ctgctacccc ggcaccggca agggcggcga cctgccgccg
     2101 cgcccggagt gcgcgccgac gtggcatccg caactgctgc cgcggctgac ccaattgcag
     2161 ctcacgctcg ccatcggcca gttcgcattg accggcatgc tgggcaggga acactgcgcg
     2221 aagaaactca ccgacaccgt ccgcgcgtgg cgcgaccacc tcgagcgagc ccgcgtgctg
     2281 ccgctgccgc accccagccc gcgcaacaag ctgtggatga agcgcaaccc atggttcgag
     2341 gcggagctcc tgccggtgct gcgcgcacgc gtggccgccg cactcgcacc ggcacccgcc
     2401 ccgcgcaagc accctgtcca ccggtcgtag gagcccgcga gatcagaatg cgccgcgcgt
     2461 ggcgacgagt tccagcccga agccgatgaa caccaggccg gcgccgccgt cgacgaaccg
     2521 ccgcgcacgc aggtagccgg cgcgcacgcg tggcagcgcg aacacgctgg cgaccagcgc
     2581 gaaccacgcg agcgtctcgg ccacgatcat cagccacagc ccccagcgcg ccccgacggc
     2641 gagcggcgtg cggatgaagg ccgcgaagat gctgccgaaa tacacgacga ccttggggtt
     2701 ggagagattg gtggcgagcc cggcccgcaa cgcctggcgc gcgttggcgg caggcaccgg
     2761 ggcgccgttc cccgcggccg gtgccggctg cagccctgcg cgcagcaggt gcgcgcccat
     2821 ccagacgagg tacgcaccgc cggccaccgc caccacctgc gccagcacgc tggcgcgcgc
     2881 gaacagccag gtaagcccgg ccagcgcgag cgccgcccag atcgcgacgc ccagggcaat
     2941 gccggccacg cccgccagtg cgtcgcgtcg cgagcggctg gccgcggtct gcgacacata
     3001 gaagaaatcc ggccccggac tcatcagcgc cacccattgc accagcgcca gcgtcaacca
     3061 ttgccccaca cgcttctcct tcctgcacca cggcttgccg cgtcggcaag ccatcttcta
     3121 cgctgcgccg agtccagcac catggccacg ggatcgttcc cggccacacc ggggagccgt
     3181 atccatgagt ctcaagctgc gcctgatcgt gatgaatttc ctccagttct acatctgggg
     3241 ggcgtggctg ctcacgatcg gcacctggtg gttccacacc cagcactggt cgggcaccag
     3301 cttcggcgcg atcttctcga cgatgggcat cgcctcgctg ttcatgccct cgatcgccgg
     3361 catcatcgcc gacaagtgga tcaatgccga gcgcctgtac ggcctgttcc agatcctcgg
     3421 cgcgctggtg ctgctggcgc tgccgctggt cggcgacccg cggctgatgt tctgggtgat
     3481 gctgctgaac atgtgcttct acatgccgac gatcgcgctg tcgatcgcgg ttgcgtacaa
     3541 cgcgctcaag caggacggac tggacgtggt cgtcgcctac ccgccgatcc gcgtgtgggg
     3601 cacggtcggg ttcatcgccg cgacgtggac ggtgagcctg ctcggtttcg aggcctcggc
     3661 cacgcagttc cacgtcgccg ccggcgcctc gctgctgctc ggcctgtacg cgttcacgct
     3721 gccgaagtgc ccgccgaaac tggacgccgc gcacagccgc acgctggtcg accggctggg
     3781 actcacctcg ttcgtgctgt tcaagaaccg caacatggcg gtgttcttca tcttcgccat
     3841 gctgctcggc gccgcgctgc aactgaccaa cgcctacggc gacaccttcc tcaaggattt
     3901 cgccaaggtc cccg
//
LOCUS       DASSVL010000231         2053 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_923632, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000231 DASSVL010000000
VERSION     DASSVL010000231.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2053)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2053)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2053
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_923632"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(348..>2053)
                     /locus_tag="VFM52_03990"
     CDS             complement(348..>2053)
                     /locus_tag="VFM52_03990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007808558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="family 20 glycosylhydrolase"
                     /protein_id="HET8764360.1"
                     /translation="LTDDQGWRIEIKRYPELTKIGAWRTPPDAGKYGEPQRYGGFYTQ
                     EQIRAVVAYAAARHVTIVPELDMPGHAQAAVASYPQLGVTGKRPAVSVDWGVNPYLYN
                     VNDDTFTFIDNVLDEVMALFPSKYIHVGGDEAIKDQWRASPAVQAKMRQLGITSEDAL
                     QGWFIGRVGQYLEQHGRKLIGWDEILDGDNLPKDATVMSWRGIDGAIKAALTGHDVVM
                     SPAPALYLDNLQSTLPDEFAGRAGPETLQDVYAFQPIPSVLDAAQAKHVLGIQANIWT
                     EHMPTMVHVDHAAFPRLDALSEVAWSPAASNDWKGFLARLPAQLARYRAQDIPYADSA
                     FAVVADVDRNVALATGKATLTLANQADFGTIHYTLDGSTPTATSPRYAGPINVKLPTT
                     VRAASFADGSELAAPRERVLSHPALLSLPGTALANCPGSNFRLRVQPLPDAASTQPTY
                     AVNVFDTCQVYPPTVMDGVSTIHVDAARLPRNFALAHEQKLVVSRPHTTRYGELVVHV
                     DRCDGAVLATMPLPDPTRSGRQFELSAKLPAPSGEHALCLIYTAPIDGPLYAIGRVAL
                     K"
BASE COUNT          274 a          664 c          778 g          337 t
ORIGIN      
        1 ccgccatgcc gaaccgggtg atgccgcggc gtatcgccgt atgccaagcg tgcatggaag
       61 tcctttgcgg aggttggccg acgcggtccc ctgtggacgc gagccagcgc gcatcttggc
      121 atgcggccag ggcgggtggc agccggggag atcgccgtcg agccatccat cgctcatgcg
      181 cgcatcgaca gttgcgacgg cacgggactg gctaggcttg cttgctcgcg cggcgtattg
      241 ctcgtggtgg ggcgggcttc agcccaccgc accacgctgg cgacggcgaa tgcaagcgag
      301 gcgaacttgg cgccgccgcc gtggacggcg cccggatgcc gcgtgcctta cttcagcgcc
      361 acccggccga tggcgtacag cgggccgtcg atcggggcgg tgtagatcag gcacaacgca
      421 tgttcgccgg agggtgccgg cagcttggcg ctgagctcga actggcggcc gctgcgcgtg
      481 gggtcgggca gcggcatggt cgccagcacc gcgccgtcgc agcggtcgac atgcaccacc
      541 agctcgccgt agcgggtcgt gtgcgggcgc gacaccacca gcttctgctc gtgcgcgagc
      601 gcgaagttgc gcggcaggcg cgccgcatcc acgtggatcg tgctgacgcc gtccatcacc
      661 gtgggcggat acacctggca ggtgtcgaac acgttgaccg cgtacgtcgg ctgggtgctg
      721 gcggcgtcgg gcagcggctg cacgcgcagg cggaagttgc tgccggggca gttcgccagc
      781 gcggtgccgg gcaggctgag cagcgcaggg tggctcagca cgcgctcgcg cggcgcggcc
      841 agctcgctgc cgtcggcaaa gctcgcggcg cgcacggtgg tcggcagctt cacgttgatc
      901 gggccggcgt agcgcggcga ggtcgcggtg ggggtggagc cgtcgagggt gtagtggatg
      961 gtgccgaaat cggcctggtt ggcgagcgtc agcgtggcct tgccggtggc cagcgccacg
     1021 ttgcggtcga cgtcggccac cacggcgaac gcgctgtccg catacgggat gtcctgcgcg
     1081 cggtagcgcg cgagctgcgc cggcaggcgg gcgaggaaac ccttccagtc gttgctggcg
     1141 gccggcgacc aggccacctc gctgagcgcg tccaggcgcg ggaaggcggc gtggtcgacg
     1201 tgcaccatgg tcggcatgtg ctcggtccag atgttggcct ggatgccgag cacgtgcttc
     1261 gcctgcgccg cgtcgagcac gctgggaatg ggctggaagg cgtacacgtc ctgcagcgtt
     1321 tccggccccg cgcggccggc gaattcgtcc ggcagggtgc tttgcagatt gtcgagatac
     1381 agcgccggcg cgggcgacat caccacgtcg tggccggtca gcgcggcctt gatcgcgccg
     1441 tcgatgccgc gccacgacat cacggtggcg tccttcggca ggttgtcgcc gtcgaggatc
     1501 tcgtcccagc cgatcagctt gcgcccgtgc tgttcgaggt actggccgac gcggccgatg
     1561 aaccagcctt gcagcgcgtc ctcgctggtg atgccgagct ggcgcatctt cgcctgtacc
     1621 gccggggacg cccgccactg gtccttgatc gcctcgtcgc cgccgacgtg gatgtacttc
     1681 gacgggaaca gcgccatcac ctcgtcgagc acgttgtcga tgaaggtgaa ggtgtcgtcg
     1741 ttgacgttgt acaggtatgg gttgacgccc cagtcgacgg acaccgcggg acgcttgccg
     1801 gtgacgccga gctgcggata cgaggccacc gcggcctgcg cgtggccggg catgtccagc
     1861 tccggcacga tggtgacgtg gcgcgcggcg gcgtaggcca ccacggcgcg gatctgctcc
     1921 tgcgtgtaga aaccgccgta gcgctggggc tcgccgtact tgccggcatc cggcggcgtg
     1981 cgccaggcgc cgatcttcgt gagttcggga tagcgcttga tctcgatgcg ccagccctgg
     2041 tcgtcggtga ggt
//
LOCUS       DASSVL010000232         2410 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1290774,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000232 DASSVL010000000
VERSION     DASSVL010000232.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2410)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2410)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2410
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1290774"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..635
                     /locus_tag="VFM52_03995"
     CDS             <1..635
                     /locus_tag="VFM52_03995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014402220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tRNA threonylcarbamoyladenosine dehydratase"
                     /protein_id="HET8764361.1"
                     /translation="HLTLIDADEVCVSNTNRQLHALDGEYGKSKVAVMAARLRAINPA
                     LVIDTIERFLTTGTLDELLDRSYDAVLDACDAFRVKLEMIAWCRRRKLTIVSVGSAGG
                     RTDPTEIRVRDLSRTEHDAMFSLIRRKLRTDFNFPRNPQRYFGVSAVYSLQNVQYPQP
                     DGTVCGNRPPEGESMNLACGGGLGAATHVTGAFAFAAVGKVIEKLLASPL"
     gene            complement(721..1461)
                     /locus_tag="VFM52_04000"
     CDS             complement(721..1461)
                     /locus_tag="VFM52_04000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014090372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP reductase"
                     /protein_id="HET8764362.1"
                     /translation="MTQRTALVTGGTGGIGSAIVRYLAHKGYRVATNYRNAEKAEAWR
                     KAMAADGIEVHMASGDVSDPEACAAMIRTLEADCGPVDILVNNAGITRDATFHKMSYQ
                     QWVDVVNTNLNACFNVTRPIIEGMRARKWGRIVQISSINGQKGQYGQANYAAAKAGMH
                     GFTISLAQENAKFGITVNTVSPGYVATDMVMAVPEEVRAKIVAQIPAGRLGKPEEIAY
                     AVAFLVGEEAAWITGANLAINGGHYMGW"
     gene            complement(1522..2385)
                     /gene="gluQRS"
                     /locus_tag="VFM52_04005"
     CDS             complement(1522..2385)
                     /gene="gluQRS"
                     /locus_tag="VFM52_04005"
                     /EC_number="6.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007806260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0043039 - tRNA aminoacylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA glutamyl-Q(34) synthetase GluQRS"
                     /protein_id="HET8764363.1"
                     /translation="MIDDGRFAPSPTGALHFGSLVAALGSWLHVRAAGGRWVVRVEDI
                     DPPRVVPGSAAAILAALHAFGMPPDGAVIHQSQRRAAYDAAFEQLRRIDAVFPCWCSR
                     SELAMLGHHRDGHCVSRAVPGREPAWRLRAPDREIAFDDALQGPQHQNLRDAVGDFVV
                     RRAEGIYSYQLACVVDDAFQGVTEVVRGCDLLDSTPRQIWLQRLLGLPTPSYLHLPLA
                     LDALGHKLSKSTQAWPVTPADPLPALRRALAFLGQLASPSVDDAGALLAAALRRFDAR
                     RLPQRSGCFAG"
BASE COUNT          372 a          783 c          857 g          398 t
ORIGIN      
        1 ggcacctgac cctgatcgat gccgacgagg tgtgcgtgtc caacaccaac cggcagctgc
       61 atgcgctgga tggcgaatac ggcaagtcga aggtcgcggt gatggccgcg cggctgcgtg
      121 cgatcaaccc ggcgttggtg atcgacacga tcgagcggtt cctgacgacc ggcacgctgg
      181 acgagctgct ggatcgcagc tacgacgcgg tgctggatgc atgcgacgcg ttccgcgtga
      241 agctggaaat gatcgcgtgg tgccggcgcc gcaagctgac tatcgtcagc gtcggctcgg
      301 ccggcgggcg caccgatccc accgagatcc gcgtgcgcga cctgtcgcgc accgagcacg
      361 acgcgatgtt cagcctgatc cggcgcaagc tgcgtacgga cttcaacttc ccgcgcaacc
      421 cgcaacgcta ctttggcgtt tcagccgtct attcgctgca gaacgtgcag tacccgcagc
      481 cggacggcac ggtatgcggc aaccggccgc cggaagggga atccatgaac ctcgcctgcg
      541 gcggcgggct cggcgccgcc acccacgtca ccggcgcatt cgcgtttgcg gcggtgggca
      601 aggtgatcga gaagctgctt gcctctcctt tgtaggagtc cgcccgcggg cgacgctcct
      661 gctctggtgc cgattgacga agggcatcgc ccgccagcgg gttcccgcga tttcaggtcg
      721 ttaccaaccc atgtagtgcc cgccgttgat ggcgaggttg gcgccggtga tccaggcggc
      781 ttcctcgccg acgaggaagg cgacggcgta ggcgatttcc tccggcttgc cgaggcgacc
      841 ggcgggaatc tgggcgacga tcttggcgcg cacttcctcg ggcacggcca tcaccatgtc
      901 ggtggcgacg tagccggggg aaacggtgtt gacggtgatg ccgaatttcg cgttttcctg
      961 ggcgagcgaa atggtgaagc cgtgcatgcc ggccttggcg gcggcgtagt tggcctggcc
     1021 gtactggccc ttctggccgt tgatcgagct gatctgcacg atgcggcccc atttgcgcgc
     1081 gcgcatgccc tcgatgatcg ggcgggtgac gttgaagcag gcgttgagat tggtgttcac
     1141 cacgtccacc cattgctggt agctcatctt gtggaaggtg gcgtcgcggg tgatgccggc
     1201 gttgttgacc aggatgtcga ccgggccgca atcggcttcg agggtacgga tcatcgccgc
     1261 gcaggcttcg gggtcggaga cgtcgcccga cgccatgtgc acttcgatgc cgtcggcggc
     1321 catcgccttg cgccacgcct cggccttctc ggcgttgcgg tagttggtgg ccacccggta
     1381 ccccttgtgc gcaaggtagc ggacgatcgc actgccgatg ccgccggtgc cacccgttac
     1441 caaagccgta cgctgcgtca tgtcagtctc cctgggtcgg ttgccgggct gggccagccc
     1501 gacaaggaga tttatagcgg gtcagccggc aaagcaaccg ctgcgctgcg gcaaccgacg
     1561 ggcgtcgaag cggcgcaatg ccgcggccag cagggcgccc gcgtcgtcga ccgacggcga
     1621 tgccagctgg ccgaggaacg ccagcgcgcg gcgcagtgcc ggcagcgggt ctgcaggggt
     1681 gaccggccag gcctgggtcg acttggaaag tttgtgtccg agcgcatcca gcgccagcgg
     1741 cagatgcagg tagcttggcg tgggcagccc cagcagtcgc tgtagccaga tctggcgcgg
     1801 cgtggagtcg agcaggtcgc agccgcgcac cacttcggtc acgccctgga acgcatcgtc
     1861 gacgacgcac gccagttggt aggagtagat gccttcggcc cggcggacga cgaagtcgcc
     1921 gacggcgtcg cgcagattct ggtgctgcgg tccttgcagc gcgtcgtcga aggcgatctc
     1981 cctgtccggt gcgcgcagcc gccacgcggg ttcgcggccc ggtaccgcgc ggctgacgca
     2041 gtggccatcg cgatggtggc caagcatcgc cagctcgctg cggctgcacc agcagggaaa
     2101 caccgcgtcg atccggcgca gttgctcgaa cgcggcgtcg taggccgcac gccgctgcga
     2161 ttggtggatc accgcaccgt ccggcggcat gccgaacgca tgcagcgcgg cgaggatggc
     2221 cgcggcggaa ccaggcacca cgcgcggggg gtcgatgtct tccacccgca ccacccagcg
     2281 gccgcccgcg gcacgcacgt gcagccagct gccgagcgcg gccaccagcg agccgaaatg
     2341 cagcgcgccg gtgggtgagg gggcgaagcg tccgtcgtcg atcatcggcc tagtgtgcat
     2401 gcctgggcca
//
LOCUS       DASSVL010000233         3027 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_33540, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000233 DASSVL010000000
VERSION     DASSVL010000233.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3027)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3027)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3027
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_33540"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1602)
                     /locus_tag="VFM52_04010"
     CDS             complement(<1..1602)
                     /locus_tag="VFM52_04010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007080270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIM-barrel domain-containing protein"
                     /protein_id="HET8764364.1"
                     /translation="MNRIRLSAAGLLALGLCVGSAYAASAPPAGHVQSLRDGAVVSVE
                     GSTQKVRLQVVSDHIIHVTAVPKGDFNLPASLMALKTGGDTHFTVGERAGAVTLDTSA
                     IEARVSPRDGAVSFFDHAGKPLLAEQPNGRSFTPVTVDGKPFYAIRQQFASPADEAFY
                     GLGQHQEGVMNYKGKDVELAQHNMDIGIPFVVSSRHYGVLWDNNSITRFGDPRPYRMI
                     DQGLKLFDANGKPGGLTASYYVDGKLKLRRDESSIDYQYLHDLKRWPAALTDAKGITG
                     GPGQTVEWKGALASDVAGAHKFRLYASGYFKLYVDNELVLDDWRQNWNPWYRDFSVAM
                     KPGEKHAIRIEWTPQSGYIALDHLDPLPPSEQNELSLYSELGHAVDYYFIAGSSLDDV
                     IAGYREVTGKAVMLPRWAYGFWQSRDHYETQDQLLDTVARYRKLGLPLDNIVQDWRYW
                     KDDAWGSHQFDKTRYPDPRGMIATVHDEHAHFMISVWPKFYPTTKNYKELEAGGHIYQ
                     RNIEEGVKDWVGPGYLSSFYDPYSAD"
     gene            complement(1599..>3027)
                     /locus_tag="VFM52_04015"
     CDS             complement(1599..>3027)
                     /locus_tag="VFM52_04015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007508407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="glycoside hydrolase family 3 C-terminal
                     domain-containing protein"
                     /protein_id="HET8764365.1"
                     /translation="YPGYATAGGSSHVEPFRNESILAGIVDQVGTHVRVLYDRGLPTP
                     DAVFKRAGFTTAGGQPGLQRQTFDNPDFHGTPASSGVDAQVDQWKPELWTNPATQRRS
                     IRWSGRYVAPRAGRYLFLTAAASADTYTLYVDGKALIAQPKREGQAPLYATLELKAGQ
                     AVAVRLDYRPDVDYSRMGLGVVPVDELISPAALKMAAMADAVVVAAGFDPTSESEAYD
                     RTFVLPWGQEALIEAVAKANPKTVVTVTSGGGYATQGWLGRVPALLQNWYPGQEGGRA
                     VAEVLFGARAPEGKLPISFEREPQDNPTYHYYDAPPHAPGTHPTVAYGEGLFVGYRWY
                     TSHPDQPQPLFPFGYGLSYTTFAFSGLKVQPAVGHAGDAVQVSFEVRNTGKRAGAEVA
                     QVYVSDPSATVVRPERELKAFEKVRLAPGQSRRVTLTLDRRAFAYYDPGHNDWKVDPG
                     RFVIRVGDASNHTPLTADLTLEKTP"
BASE COUNT          445 a         1019 c         1047 g          516 t
ORIGIN      
        1 gtcagcggaa tacgggtcgt agaacgagct gagataaccc ggccccaccc agtccttgac
       61 gccttcctcg atgttgcgtt ggtagatgtg gccgcccgcc tccagctcct tgtagttctt
      121 ggtggtgggg tagaacttcg gccacaccga gatcatgaag tgcgcgtgct cgtcgtgcac
      181 ggtggcgatc atgcccctgg ggtcgggata gcgcgtcttg tcgaactggt gcgagcccca
      241 ggcgtcgtcc ttccagtagc gccagtcttg cacgatgttg tccagcggca ggccgagttt
      301 gcggtagcgc gccacggtgt cgagcagctg gtcctgcgtc tcgtagtggt cgcggctctg
      361 ccagaagcca taggcccagc gcggcagcat caccgccttg ccggtgacct cgcggtagcc
      421 ggcgatcacg tcgtcgaggc tgctgccggc gatgaagtag tagtccaccg cgtggccgag
      481 ctcggagtac agcgagagct cgttctgctc ggacggcggg agcgggtcga gatggtcgag
      541 cgcgatgtag cccgactgcg gcgtccactc gatgcggatg gcgtgcttct cgccgggctt
      601 catcgccacg ctgaagtcgc ggtaccacgg gttccagttc tgccgccagt cgtccagcac
      661 cagctcgttg tcgacgtaga gcttgaaata gccgctggca tagagccgga acttgtgcgc
      721 gccggccacg tcggaggcca gcgcgccctt ccactccacc gtctggccgg ggccgccggt
      781 gatgcctttc gcgtcggtca acgcggcagg ccagcgcttg aggtcgtgaa ggtactggta
      841 gtcgatgctc gattcgtcgc gacgcagctt gagcttgccg tccacgtagt agctggcggt
      901 gaggccgccg ggcttgccgt tggcgtcgaa cagcttgagg ccttggtcga tcatccggta
      961 cgggcgcggg tcgccgaagc gggtgatcga gttgttgtcc cacagcacgc cgtagtggcg
     1021 cgaggacacc acgaacggaa tgccgatatc catgttgtgc tgggcaagct cgacgtcctt
     1081 gcccttgtag ttcatcaccc cttcctggtg ctggcccagg ccgtagaacg cctcgtcggc
     1141 aggcgaggcg aactgctggc ggatcgcgta gaacggcttg ccgtccaccg tcaccggggt
     1201 gaagctgcgg ccgttcggct gctcggcgag cagcggcttg ccggcgtggt cgaaaaagct
     1261 caccgcacca tcgcgcggcg acacgcgggc ctcgatggcc gaggtgtcca gcgtcaccgc
     1321 gccggccctc tcgccgaccg taaagtgggt gtcgccgccg gtcttcagcg ccatcaggct
     1381 ggccggcagg ttgaagtcgc ccttgggcac ggcggtgacg tggatgatgt ggtcggacac
     1441 cacctgcagg cgcaccttct gcgtggagcc ttcgacgctg accaccgcgc catcacgcaa
     1501 ggactggaca tggccggcgg gcggcgccga cgcagcgtac gcgctaccga cacacaggcc
     1561 gagggcgagc aaaccggcgg cagacaggcg gatgcgattc atggcgtctt ctccagcgtc
     1621 aaatcagcgg tcagcggcgt gtggttggaa gcgtcgccca cacggatcac gaagcggccc
     1681 gggtcgacct tccagtcgtt gtgcccgggg tcgtagtagg caaaggcgcg gcgatcgagc
     1741 gtgagcgtga cacgtcggct ctgccccggc gcgaggcgca ctttctcgaa cgccttcagc
     1801 tcgcgctcgg ggcgcacgac ggtcgccgac gggtcgctca cgtacacctg cgccacctcg
     1861 gcgcccgcgc gcttgccggt gttgcgcacc tcgaacgaaa cctgcaccgc atcgcccgcg
     1921 tgccccacgg ccggctgcac cttgagcccg gagaacgcga acgtggtgta cgacagcccg
     1981 tagccgaacg ggaacagcgg ctgcggctgg tcggggtggc tggtgtacca gcggtagccg
     2041 acgaacaggc cctcgccgta tgccaccgtg ggatgcgtgc caggcgcgtg cggcggcgcg
     2101 tcgtaatagt ggtaggtcgg gttgtcctgc ggctcgcgct cgaaactgat cggcagcttg
     2161 ccttccggcg cgcgcgcgcc gaacagcacc tcggccacgg cgcggccgcc ctcctgcccc
     2221 ggataccagt tctgcagcag tgccggcacc cggccgagcc agccttgcgt ggcgtagccg
     2281 ccacccgagg tcaccgtcac caccgtcttc gggttcgcct tcgccaccgc ttcgatcaag
     2341 gcttcctggc cccagggcag gacgaaggtg cggtcgtagg cttcgctctc cgaggtcggg
     2401 tcgaagccgg ccgccaccac cacggcatcg gccatcgccg ccatcttcag cgccgccggc
     2461 gagatcagct cgtcgaccgg caccacgccc aggcccatgc ggctgtagtc cacgtcgggc
     2521 cggtaatcga ggcgcaccgc caccgcctgc ccggccttga gctccagcgt ggcgtacagc
     2581 ggcgcctggc cctcgcgctt gggctgcgcg atcagcgcct tgccgtccac gtacagcgta
     2641 taggtgtcgg cgctcgcggc cgcggtcagg aacaggtagc ggccggcgcg cggcgccacg
     2701 tagcggccgc tccagcggat gctcctgcgc tgcgtggccg ggttggtcca cagctccggc
     2761 ttccactggt cgacctgcgc atccacgccg ctcgatgcgg gcgtgccgtg gaaatccggg
     2821 ttgtcgaacg tctgccgctg caggcctggc tggccgcctg cggtggtgaa gccggcgcgc
     2881 ttgaataccg cgtccggcgt cggcaggccg cggtcgtaca gcacgcgcac gtgagtgccg
     2941 acctggtcga cgatgccggc caaaatgctt tcgttgcgga acggctccac gtgcgagctg
     3001 ccgccggcgg tggcgtaacc cggatac
//
LOCUS       DASSVL010000234         2099 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_89997, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000234 DASSVL010000000
VERSION     DASSVL010000234.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2099)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2099)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2099
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_89997"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..252
                     /locus_tag="VFM52_04020"
     CDS             <1..252
                     /locus_tag="VFM52_04020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007809483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8764366.1"
                     /translation="QAPAHRAVRWLIPTGAFAVIALAAVMAWRPLPPHAPATPNVAGS
                     LDEVDTELPPDADKADPNLYQNLDFYGWLAANDSQPATR"
     gene            257..754
                     /locus_tag="VFM52_04025"
     CDS             257..754
                     /locus_tag="VFM52_04025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008435551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3106 domain-containing protein"
                     /protein_id="HET8764367.1"
                     /translation="MPAATRTLLILLLAATLGGFAAPALHAQSAPPPTAWSQLSPAQQ
                     DVLAPLQAKWNTMPPQRQARLLEKSRQWVDLPPEKRAEVRQRIAHWQAMTPAERAQAR
                     ENHKLFRELTPAQRAQLHAAYRQFQQLPPERRAQLRQQWHAMPPAQRMQWLQHGEGRL
                     HPPHR"
     gene            complement(1082..>2099)
                     /locus_tag="VFM52_04030"
     CDS             complement(1082..>2099)
                     /locus_tag="VFM52_04030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019466610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="NAD(P) transhydrogenase subunit alpha"
                     /protein_id="HET8764368.1"
                     /translation="SGRGLRVLLEHGAGAAAGFPDAAYAQAEFADAAGVLAQADVLAC
                     VLPPADAVYAQLREGAVVLGQLRPHGAPARLAALAARRLTAFALELLPRTTRAQAMDV
                     LSSQAAVAGYRAMLIAAEACPKFFPMLTTAAGTIRPSKVLVIGAGVAGLQAIATARRL
                     GAQVEGYDVRPETREQVESLGAKFLELGVSAAGSGGYARELSAEERAAQQQALAERLA
                     GFDVVVSTAAVPGRPAPKILTGAMVAGMKPGALIVDLAAESGGNCELTRPGERVEQGG
                     VAVLGPLNLPAGAPLHASEMYARNVANFAELLVKDGALAPDFADELVARSCVVRAGEV
                     LLKA"
BASE COUNT          320 a          846 c          690 g          243 t
ORIGIN      
        1 caggccccgg cgcatcgcgc cgtgcgctgg ctgatcccca ccggtgcgtt cgccgtgatc
       61 gcgctggccg cggtgatggc gtggcggccc ttgccgccgc atgctcctgc cacgccgaac
      121 gtcgccggca gcctcgacga agtggacacc gaactgccgc ccgacgccga caaggccgac
      181 ccgaacctct accagaacct cgatttctac ggctggctgg ccgccaacga cagccagccg
      241 gccacccgct gaagccatgc ccgccgccac ccgcaccctg ctgatactgc tcctcgccgc
      301 caccctcggc ggcttcgccg cgcccgcgct gcacgcccag agcgcaccgc cgcctaccgc
      361 ctggagccag ctgtcgccgg cccagcagga cgtgttggca ccgctgcaag ccaaatggaa
      421 caccatgcca ccgcagcgac aggcccgcct cctggaaaaa agccggcagt gggtggatct
      481 gccgccggag aagcgcgcgg aagtccgcca gcgcatcgcg cactggcagg cgatgacccc
      541 ggccgagcgg gcacaggcgc gcgagaacca caagctgttc cgcgagctca cgcccgcgca
      601 gcgcgcgcaa ctgcacgccg cctacaggca gttccagcaa ttgccgcccg aacgccgcgc
      661 gcaactgcgc cagcagtggc acgccatgcc gccggcacag cgcatgcaat ggctgcagca
      721 cggcgagggt cgtctgcatc cgccgcaccg ctgaaacccg gccacggaat atgcgcaccc
      781 ccgcatgatc ccctcgccgc tgccttggcg ttcttgacga cgcgcgcggc atcgtcgctt
      841 tcgacggatg gcgcccagag gtcgcctgca cggtcaggcc gcacagcaac ctggccgccg
      901 gcgcgcaagg catgggcaca tgcgccggaa acaacggatt ccttgatccg cggcaggcgg
      961 ccgcgcgcgg gctggtcgtg gtggggaccg aggtgacctg caccggcaac gccccggatc
     1021 gcctccgcca tcgtccgcgt cgaagctccc gaccctcccg ttcaagcggg acggcggcgc
     1081 gtcacgcctt gagcaacacc tcgcccgcgc gcaccacgca gctcctggcc accagctcgt
     1141 cggcgaagtc gggcgccagc gcaccgtcct tcaccagcag ctcggcaaaa ttcgccacgt
     1201 tgcgggcgta catctccgag gcatgcagcg gcgcgccggc gggcaggttc aacgggccga
     1261 gcacggccac gccaccctgc tcgacgcgct cgcccggccg ggtcagctcg cagttgccgc
     1321 cgctctcggc ggcgaggtcg acgatcagcg caccgggctt catgccggcc accatcgcgc
     1381 cggtgaggat cttcggcgcc ggccgccccg gcacggcggc ggtggacacc accacgtcga
     1441 agccggcgag gcgctcggcc agcgcctgct gctgcgcggc gcgttcttcc gccgacaact
     1501 cgcgcgcata gccgccgctg ccggcggcgc tcacccccag ctccaggaat ttcgcgccca
     1561 gcgactccac ctgctcgcgc gtctccgggc gcacgtcgta gccctccacc tgcgcgccca
     1621 gccggcgcgc ggtggcgatg gcctgcaggc ccgccacgcc cgcgccgatc accagcactt
     1681 tggacggccg gatggtgccg gccgccgtgg tgagcatggg aaagaacttg gggcaggcct
     1741 cggccgcgat cagcatggcg cggtaaccgg ccaccgccgc ctgcgagctc aggacgtcca
     1801 tcgcctgcgc gcgggtggtg cgcggcaaca gctccagcgc gaaggcggtg agtcggcgcg
     1861 ccgccagcgc ggcgaggcgc gcgggcgcgc catggggccg caactggccc agcaccaccg
     1921 cgccctcgcg caactgcgcg tacacggcgt ccgccggcgg cagcacgcag gccagcacgt
     1981 cggcctgcgc cagcacgcca gcggcatcgg caaactccgc ctgcgcatag gccgcatcgg
     2041 gaaaacccgc cgccgcgccc gcgccgtgct ccagcagcac gcgcaagccc ctgccgctg
//
LOCUS       DASSVL010000235         2314 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_753822, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000235 DASSVL010000000
VERSION     DASSVL010000235.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2314)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2314)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2314
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_753822"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            118..807
                     /locus_tag="VFM52_04035"
     CDS             118..807
                     /locus_tag="VFM52_04035"
                     /inference="COORDINATES: protein motif:HMM:NF013989.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008703 -
                     5-amino-6-(5-phosphoribosylamino)uracil reductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrofolate reductase family protein"
                     /protein_id="HET8764369.1"
                     /translation="MANRPYILLSGAVSLDGYLDDAGPHRLLLSNAADLDRVDALRAQ
                     CDAILVGANTLRRDDPHLQLRDGARRDARVASGRRASPLRVTVTRGGVLPVGAHFFAS
                     SGEPALVYAAHAAAAALCSALVARAVVVDLGEQPTLDAVVADLHARGVGRLLVEGGGR
                     VFTQFLQGGLVDELRIAVAPIFVGNARAPRFVGDGAFPWCPGCRARLIDVAALGDVAV
                     LRYALSARCTD"
     gene            complement(777..>2314)
                     /locus_tag="VFM52_04040"
     CDS             complement(777..>2314)
                     /locus_tag="VFM52_04040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8764370.1"
                     /translation="VALAVLALVLPRRTHGWLATWFGLVLALLVWLKLLDLGFQLAFE
                     RPFDPLADGAYLAPAFGVLVDTFGRLAAVAITGLVALVVLVIPLGLVRAARRMFAGMQ
                     QGNRPVVARTVGALATLWGVLAVAGVALPAAPGPVAATDTAALAVRHVRGVLGGLADH
                     RDFARRIASDRFATTPATCLLAGLRGKDVLLVFVESYGRVAVTGTPFARGVDTALRAG
                     NQSLAAHGYAARSGFLVSPTFGGGSWLAHATLQSGLWIDDQRRYDQLMASQRLTLARA
                     FRQAGWRTVADAPADTGRWPQGRLFYRWDAFYNGKDVGYRGPAFSYAPMPDQYTLLRL
                     RDSELAKAPRKPVFAEIDFVSSHHPWTPLPRIVPWSAVGDGSVFDPMPAQGLTPEAAF
                     RDPATVQRLYGESIQYSMDALVSYLTHWPDPNLVVIALGDHQPWGIVSGPHPGHAVPI
                     TVIAQDPAIMAALDGWHWTPGLLPAPEVPAWRMSAFRDRFFAAFSGSCRVPAQSVQRA
                     DKA"
BASE COUNT          368 a          777 c          840 g          329 t
ORIGIN      
        1 acgaaaggca aggacgacgc gctttcctca tcgcgacgcg cggcgctgcc gcatgcgtaa
       61 cggggcgacg tggtgaaatg ccggcaacgg tgcatccagg ccgacttcgg ggagatcgtg
      121 gcgaaccgac cctacatcct gctcagtggc gcggtgtcgc tcgacggcta tctcgacgat
      181 gccgggccgc atcggttgtt gttgtcgaac gcggccgacc ttgatcgcgt ggacgcgttg
      241 cgtgcgcaat gcgatgcgat cctcgtcggc gccaatacgc tgcgccggga cgatccgcac
      301 ctgcagttgc gcgacggtgc gcgccgcgat gcccgcgtgg caagcgggcg gcgcgcctcg
      361 ccactgcgcg tgacggtgac ccgcggcggc gtgctgccgg tgggggcaca tttctttgcg
      421 tccagcggcg aaccggcgct ggtctacgct gcccacgccg cggccgccgc cttgtgctcg
      481 gcgctcgttg cccgtgccgt ggtggtggac ctcggcgagc agccgacgtt ggacgcagtg
      541 gttgccgacc tgcatgcgcg cggcgtgggg cgcctgctgg tcgaaggcgg cgggcgggta
      601 ttcacccagt tcctgcaagg tgggctggtc gacgagttgc gcatcgcggt ggcgccgatc
      661 ttcgtcggca atgcgcgggc gccgcggttc gtcggggacg gtgcattccc gtggtgcccc
      721 ggctgccgcg cacggctgat cgacgtggcc gcgctcggcg acgtcgcggt gctgcgctac
      781 gccttgtcgg cgcgctgcac cgactgagct ggcacccggc atgaaccgct gaacgcagcg
      841 aagaagcgat cgcggaatgc gctcatgcgc catgccggca cctccggtgc aggcagcagg
      901 ccaggtgtcc aatgccagcc gtccagggcc gccatgatgg ccgggtcctg ggcgatgacg
      961 gtgatcggca ccgcatggcc gggatggggg cccgaaacga tgccccacgg ctggtggtcg
     1021 cccagcgcga tcaccaccag attcgggtcc ggccagtggg tgagatagga aaccagcgca
     1081 tccatgctgt actggatgct ttcaccgtac agccgctgca ccgttgccgg gtcgcggaac
     1141 gcggcttcgg gcgtcagccc ctgtgccggc atcggatcaa agacgctgcc gtcgcccacg
     1201 gcggaccacg gcacgatccg cggcagtggc gtccatgggt ggtggctgga cacgaaatcg
     1261 atctcggcaa agaccggctt gcgcggtgcc ttcgccagct cgctgtcgcg cagcctgagc
     1321 agcgtgtact ggtccggcat cggcgcgtag ctgaaagccg gaccgcggta gccgacgtcc
     1381 ttgccgttgt agaacgcgtc ccagcgatag aacagcctgc cttgcggcca gcgcccggtg
     1441 tctgccggcg catcggccac ggtgcgccag ccggcctgcc ggaacgcgcg tgcgagggtc
     1501 agacgctggc tggccatgag ctggtcatag cggcgctggt cgtcgatcca caatccggat
     1561 tgcaaggtcg cgtgcgcgag ccagctgccg ccgccgaacg tcggcgaaac gaggaaaccc
     1621 gaacgcgccg catagccatg tgcggccagt gactggttgc cggcgcgcaa tgccgtgtcg
     1681 acgccgcgcg cgaacggcgt gccggtgacg gcgacgcggc cgtagctttc gacgaacacc
     1741 agcagcacgt ccttgccgcg caagccggcg aggaggcagg tggcgggtgt cgtggcaaat
     1801 cgatcggaag cgatccggcg ggcgaagtca cgatgatcgg cgaggccgcc cagcacgccg
     1861 cgaacgtgac gaacggcgag cgccgcggtg tccgtcgctg ccaccggtcc cggcgccgcc
     1921 ggcagcgcga cgccggccac cgcaagtaca ccccacaacg tggcgagggc gccgacggtg
     1981 cgggcgacga ccggtcgatt cccttgttgc atgccggcaa acatgcgacg tgcggcgcgc
     2041 accaggccga gcggaatcac gagcacgacc agcgcgacga ggccggtgat cgcgacggcg
     2101 gcgaggcggc cgaaggtatc caccagcacg ccgaatgccg gcgcaaggta cgcgccgtct
     2161 gccaatgggt cgaacggtcg ctcgaatgcc agctggaaac cgaggtcgag cagcttcagc
     2221 caaaccagca gcgccagcac caggccgaac catgtcgcga gccaaccgtg cgtgcggcgc
     2281 ggcagcacca gcgcaaggac ggccagcgcg acca
//
LOCUS       DASSVL010000236         2018 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_853099, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000236 DASSVL010000000
VERSION     DASSVL010000236.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2018)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2018)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2018
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_853099"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1459)
                     /locus_tag="VFM52_04045"
     CDS             complement(<1..1459)
                     /locus_tag="VFM52_04045"
                     /inference="COORDINATES: protein motif:HMM:NF024642.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UvrD-helicase domain-containing protein"
                     /protein_id="HET8764371.1"
                     /translation="MSALQPLNVLGMPLAGTQLIEASAGTGKTWTIAALYVRLVLGHG
                     RDAPLLPNQILVMTFTKAATAELRERIRSRLTEAAAAFRSDGTGDDFLRDLVAHYPAG
                     NARAGAARRLDLAAQWMDEAAIFTIHGWCQRMLTQHAFASGDTVADGGIADAAALRIE
                     AVRDYWRCCVAPLADDGVAWVAQWWQSPDDLAAAVKPLLPLPVAGLRLGDAGIPPIAD
                     ASAFIATRAAALHAASATARTAWRDDADTIDALLTNAVQARTLSATKLPLTSLPGCLA
                     AMRDWANGADAPVELLRRFTQPAIDGAANKGKAAPGHPAFAALQRLVEAGAAGTVDYP
                     RLLAHAAHWIAAHEDAARRAQGTLGYDDMLQRLANALDDDHGEALAQRIVAQYPVALV
                     DEFQDTDPLQWHSLERVYVDRPGATLCLIGDPKQAIYGFRGADIQTYLHARERAALPW
                     WTLPVNFRSTTALVAAVNRVFLHASTQPQGAFGFDD"
     gene            complement(1456..>2018)
                     /locus_tag="VFM52_04050"
     CDS             complement(1456..>2018)
                     /locus_tag="VFM52_04050"
                     /inference="COORDINATES: protein motif:HMM:NF037683.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="exodeoxyribonuclease V subunit gamma"
                     /protein_id="HET8764372.1"
                     /translation="PPQAIRHAAAGVAIDGWLDDLRQGDAGWVRLVATASTLVDAKTD
                     VPRHDKLLDAWVVHLLANTVKATSSILIGADATLQLPPLAPDAAAAQLHALFAAVAEG
                     MCQPLPIARRTAFAWLIGPAESAPSRARARYDRGAYVGQGEVADDACLAREWPDFAAL
                     HAAGFERWLHLYAPLVAAVNKREASA"
BASE COUNT          285 a          693 c          755 g          285 t
ORIGIN      
        1 ggtcatcgaa cccgaaggca ccctggggct gcgtcgacgc atgcaggaag acgcgattca
       61 ccgcggcgac gagcgccgtg gtcgagcgga agttgaccgg cagcgtccac cacggcaatg
      121 cggcgcgctc gcgggcatgc aggtaggtct ggatgtcggc gccacggaag ccgtagatgg
      181 cctgcttggg gtcgccgatc aggcacagcg tggcgcccgg ccggtcgaca tagacgcgtt
      241 cgagactgtg ccactgcagc ggatcggtgt cctggaactc gtcgaccagc gcgaccgggt
      301 attgcgccac gatccgttgc gccagcgcct cgccgtggtc gtcgtccagt gcgttggcaa
      361 ggcgttgcag catgtcgtcg tagccgagcg tgccctgcgc acgacgcgcg gcatcctcgt
      421 gggcggcgat ccagtgcgcc gcgtgggcaa gcaggcgcgg gtaatcgacg gtgccggcgg
      481 cgccggcctc gaccaggcgc tggagcgccg cgaaggccgg atgacccggt gccgccttgc
      541 ccttgtttgc ggcgccatcg atggccggct gcgtgaaacg ccggagcaac tcgaccggtg
      601 cgtcggcacc gttggcccag tcgcgcatgg cggccaggca cccaggcagc gacgtcagcg
      661 gcagcttcgt cgcactgagc gtcctggcct gcactgcgtt ggtgagcagc gcgtcgatcg
      721 tgtcggcgtc gtcgcgccag gccgtacgcg ccgtcgccga tgccgcgtgc agcgccgcgg
      781 cccgggtggc gatgaaggcg ctggcgtcgg cgatgggcgg aatgccggca tcgccgaggc
      841 gcaacccggc gaccggcagc ggcagcagcg gcttcaccgc cgcggcaaga tcgtcgggcg
      901 actgccacca ctgcgcgacc cacgccacgc catcgtcggc cagcggcgcc acgcagcagc
      961 gccagtaatc gcggacggct tcgatgcgca atgcggcggc atcggcaatg ccgccgtcgg
     1021 ccacggtgtc gccgctggcg aacgcgtgct gggtcagcat gcgttggcac cagccgtgga
     1081 tggtgaagat cgccgcttcg tccatccatt gcgccgcaag gtcgagccgc cgcgcggcgc
     1141 cggcgcgggc attgccggcg ggatagtgcg caaccaggtc gcgcaggaaa tcgtcgccgg
     1201 tgccgtcgct gcggaacgcg gcagcagcct cggtcaggcg cgaccggatg cgctcgcgca
     1261 gctcggcggt ggcggccttg gtgaaggtca tcaccaggat ctggttgggc agcagtggcg
     1321 cgtcgcggcc gtggccgagc acgaggcgca cgtagagcgc cgcgatcgtc cacgtcttgc
     1381 cggtgccggc gctggcttcg atcagctgcg tgccggcgag cggcatgccc aggacgttca
     1441 gcggctgcag cgcactcatg ccgatgcctc gcgcttgttg acggcggcga ccagcggcgc
     1501 gtacaggtgc agccagcgct cgaagccggc ggcgtgcagc gcggcgaagt ccggccattc
     1561 gcgggccagg caggcgtcgt ccgccacttc gccctggccg acgtacgcgc cgcggtcgta
     1621 gcgcgcacgc gcacgcgacg gtgcgctttc cgctggacca atgagccatg caaaggccgt
     1681 ccggcgtgcg atgggaagcg gttggcacat gccctccgcc acggcggcga acagcgcgtg
     1741 caactgcgcg gcggccgcgt ccggggccag cggtggcagc tgcagcgtgg cgtccgcgcc
     1801 gatgaggatg ctggacgtgg ctttcaccgt gtttgcgagc aggtggacga cccaggcgtc
     1861 gagcagcttg tcgtgccgcg gaacatccgt cttcgcatcg accagcgtgc tggccgtcgc
     1921 caccaggcgc acccagccgg cgtcgccctg gcgcaggtcg tcgagccagc cgtcgatcgc
     1981 cacccccgct gccgcgtgac gaatcgcctg cggcggga
//
LOCUS       DASSVL010000237         2612 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_965806, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000237 DASSVL010000000
VERSION     DASSVL010000237.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2612)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2612)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2612
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_965806"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..138
                     /locus_tag="VFM52_04055"
     CDS             <1..138
                     /locus_tag="VFM52_04055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007507073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal-binding domain-containing protein"
                     /protein_id="HET8764373.1"
                     /translation="FEQMLEHANDLGANAIIAMRYDANEIMNGVTEVLAYGTAVQVQP
                     A"
     gene            248..451
                     /locus_tag="VFM52_04060"
     CDS             248..451
                     /locus_tag="VFM52_04060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004650632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dodecin family protein"
                     /protein_id="HET8764374.1"
                     /translation="MSVAKVIEINASSKQGIEDAVQHGLRKAGESVKKIKGAWINEIK
                     VVTADDGSVTEWRVNMKVNFVVD"
     gene            complement(491..1321)
                     /locus_tag="VFM52_04065"
     CDS             complement(491..1321)
                     /locus_tag="VFM52_04065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007810025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="kinase"
                     /protein_id="HET8764375.1"
                     /translation="MMSLAQQQNEALAGHLLDQYAGRIARSRRPYILGLSGLQGSGKS
                     TLARVMKAQAKARGWDTEVLSLDDFYYARSEREALARDVHPLLRSRGVPGTHEIELLL
                     SVLAAVPHASARLAVTHPRFDKGRDTRLPPSRWPRITKRPALVIVEGWALGIRPQPLT
                     ALARPINALERDEDPDGAWRRWVNKQLRGYQPLWRKFDALIVLQAPNWDIVRRWRGEQ
                     EEELVARHAPLAMDAASMGRFLMHFERLSRHALATLPALADTVVEYDDDRHVTGLTHG
                     "
     gene            1534..2121
                     /gene="pdxH"
                     /locus_tag="VFM52_04070"
     CDS             1534..2121
                     /gene="pdxH"
                     /locus_tag="VFM52_04070"
                     /EC_number="1.4.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015446990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004733 - pyridoxamine phosphate oxidase
                     activity [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase"
                     /protein_id="HET8764376.1"
                     /translation="MLKPEILDTFIRLLDEAKASGDPEPTAMNLATAESAGRVASRIV
                     LLKGVDERGFRFFSNYQSDKGGQLEAHAQVALCFHWKHVRQGVQVRVEGVARKLQEEE
                     SDAYFASRPRGSQIGAWASLQSQTLPDRETFERRVQHYEEEFAGRNVSRPPHWGGYLV
                     EPDMIEFWYGAEFRLHERVRWSRHGQTWTSRMLYP"
     gene            2118..2561
                     /locus_tag="VFM52_04075"
     CDS             2118..2561
                     /locus_tag="VFM52_04075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017464045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="secondary thiamine-phosphate synthase enzyme
                     YjbQ"
                     /protein_id="HET8764377.1"
                     /translation="MSASAVVVAQREFVVDTRGRGFHDITAEVADAVAASAVRIGTAL
                     VFTPHTSCSLLLGENADPAVRADLERWFARAVPDGDPLFRHDAEGPDDMPAHVRSILT
                     GVSLGVPVGNGTLTLGTWQGIYLWEHRHAAHRRRVVVTVTGMPTD"
BASE COUNT          408 a          903 c          918 g          383 t
ORIGIN      
        1 ttcgagcaga tgctcgagca cgccaacgac ctcggcgcca acgcgatcat cgccatgcgc
       61 tacgacgcca acgagatcat gaacggcgtg accgaggtcc tggcctacgg cacggcggta
      121 caggtgcagc ccgcttgagc gcatgacgcg gcgcggcttg tgccgcgtgg cgcgcgcgga
      181 ccagactcgg gcttcgggac agggagcgcc gcgtgccgct tgcacgcccg gacgggaggt
      241 tcacgccatg tcagtagcca aggtcatcga gatcaacgcg tcgtcgaagc agggcatcga
      301 ggatgccgtg cagcacgggt tgcgcaaggc cggggaatcg gtgaagaaga tcaagggagc
      361 ctggatcaac gagatcaagg tggtcaccgc cgacgacggc agcgtcaccg agtggcgcgt
      421 caacatgaag gtcaacttcg tcgtcgactg agggcgcgcg gcgtcagggc ggcgcctcga
      481 cgctgccctg tcagccgtgc gtgaggccgg tcacgtggcg gtcgtcgtcg tactccacca
      541 ccgtgtcggc cagcgccggc agcgtcgcca atgcgtggcg gctgaggcgt tcgaagtgca
      601 tcaggaagcg gcccatgctg gccgcgtcca tcgccagcgg ggcgtggcgt gcgaccagtt
      661 cctcctcctg ctcgccgcgc cagcggcgca cgatgtccca gttcggtgcc tgcagcacga
      721 tcagcgcgtc gaacttgcgc catagcggct ggtagccgcg caactgcttg ttgacccagc
      781 gccgccaggc gccgtccgga tcctcgtcgc gttccagtgc attgatcggc cgggccagcg
      841 ccgtcagcgg ctgcggccgg atgcccagcg cccaaccttc cacgatcacc agcgcgggtc
      901 gcttggtgat ccgcggccag cgcgagggcg gcaggcgcgt gtcgcggccc ttgtcgaagc
      961 gcggatgggt caccgccagc cgggcggagg cgtgcggcac cgccgccagc accgacagca
     1021 gcagctcgat ctcgtgggtg cccggcacgc cgcgcgaacg cagcagcggg tgcacgtcgc
     1081 gcgccagggc ctcgcgctcg ctgcgggcgt agtagaaatc gtccagcgag agcacctcgg
     1141 tgtcccagcc gcgcgccttg gcctgcgcct tcatgactcg cgccagggtg ctcttgccgc
     1201 tgccctgcag gcccgacagg cccaggatgt agggcctgcg cgagcgcgca atgcgcccgg
     1261 cgtactggtc cagaaggtgt ccggccagcg cctcgttctg ctgctgcgcc agcgacatca
     1321 tcggcggcga ctcccggcct ggcccgggcc ggcacgacgg caggccggcg catggccatt
     1381 gccgccattt tcaccttgcg tggagaagca tcgcgccgtt gccgccgggg gcgggatgcg
     1441 gggtgcgggg atcattgcac tatcatcgga cagtttcatt cgctccatga tggcgcgctt
     1501 tggccacgac gcaaaaggga agtttcacac atcatgctca aacctgaaat cctggacact
     1561 ttcatccggc tgctggacga ggccaaggcc agcggcgacc ccgaacccac ggcgatgaac
     1621 ctggccaccg cggaaagcgc cggccgggtc gcctcgcgca tcgtgctcct gaagggcgtc
     1681 gacgagcgcg gctttcgctt tttcagcaac taccagagcg acaagggcgg ccaattggag
     1741 gcgcacgcgc aggtcgcgct gtgcttccac tggaaacacg tgcgccaggg cgtgcaggtg
     1801 cgcgtcgagg gagtcgcgcg gaaactgcag gaggaggagt ccgacgccta cttcgccagc
     1861 cgcccgcgcg gcagccagat cggcgcctgg gcctcgctgc agtcgcagac cctgcccgac
     1921 cgcgagacct tcgagcggcg cgtgcagcac tacgaggagg agttcgccgg gcgcaacgtc
     1981 agccggccgc cgcactgggg cggttacctg gtggagccgg acatgatcga gttctggtat
     2041 ggcgccgagt tccgcctgca cgagcgcgtg cgctggagcc gccacgggca gacctggacg
     2101 tcccggatgc tgtacccgtg agcgcgtcgg cggtggtggt ggcgcagcgc gagttcgtgg
     2161 tcgacacccg cggccgcggc ttccacgaca tcaccgccga agtcgccgat gcggtcgcgg
     2221 ccagcgcggt gcgcatcggc accgcgctgg tgttcacgcc gcacaccagt tgctcgctgc
     2281 tgctcggcga gaatgccgac cccgccgtgc gcgccgacct cgagcgctgg ttcgcccgcg
     2341 cggtgccgga cggcgatccg ctcttccggc atgacgccga aggccccgac gacatgcccg
     2401 cgcacgtgcg ctcgatcctc accggggtca gcctcggcgt gccggtgggc aacggcacgc
     2461 tgaccctcgg cacctggcag ggcatctacc tgtgggaaca ccgccacgcc gcgcaccggc
     2521 gccgggtggt ggtgaccgtg acgggcatgc cgacggactg atctcgctca gagcagccgc
     2581 atcagttcct tcatcagcgg caaccggcgc ac
//
LOCUS       DASSVL010000238         2424 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1262658,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000238 DASSVL010000000
VERSION     DASSVL010000238.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2424)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2424)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2424
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1262658"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            94..1242
                     /gene="dgoD"
                     /locus_tag="VFM52_04080"
     CDS             94..1242
                     /gene="dgoD"
                     /locus_tag="VFM52_04080"
                     /EC_number="4.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020077623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008869 - galactonate dehydratase activity
                     [Evidence IEA];
                     GO_process: GO:0009063 - amino acid catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="galactonate dehydratase"
                     /protein_id="HET8764378.1"
                     /translation="MKITKLTTYVVPPRWTFLRIDTDAGISGWGEPVVEGRAHTVAAA
                     VAELADYLVGKDPRAVEDLWSVMYRGGFYRGGPVLMSAIAGVDQALWDIKGKDLGKPV
                     HELLGGPVRERIRVYSWIGGDRPADTANAAKDAVARGFTAVKMNATEEMQYIDAHAKV
                     THVLENVQAIRDAVGPDIGIALDFHGRVHKPMAKVLMRELHAFNLMFIEEPVLSDHLE
                     AIPELAAISPAPIALGERLYSRWDFKRVLTTGGVDILQPDPSHAGGITETRKIAAMAE
                     AFDVALALHCPLGPIALAANLQLDAVCHNAFIQEQSLGIHYNRGNDLLDYITDRHVFA
                     YADGYVAMPTGPGLGIEVNEAYVAERAKVGQHWHNPIWRHADGSVAEW"
     gene            1248..2015
                     /locus_tag="VFM52_04085"
     CDS             1248..2015
                     /locus_tag="VFM52_04085"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007081579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HET8764379.1"
                     /translation="MASAYARYPSLAGRTVLVSGGATGIGAAFVSHFARQGARVAFLD
                     IDDAGAAELLPTLADVQHLPQFVHCDVTDIAALQDAIATVAGRLGPITVLVNNAANDV
                     RHHLPDVDLAAYEQNLAINLRHQVFATRAVAPGMEAAGGGSIICLGSTGWMKKNADYP
                     LYATAKAAVHGFVNGMAHTLGQRNIRINALVPGWVITDKQRRLWLDADGKVEIARVQC
                     MRGYLMADDIARMALFLGSDDSHMCTGQSFVVDGGWV"
     gene            2012..>2424
                     /locus_tag="VFM52_04090"
     CDS             2012..>2424
                     /locus_tag="VFM52_04090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007081580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMP-30/gluconolactonase/LRE family protein"
                     /protein_id="HET8764380.1"
                     /translation="MNAPAQVQLAAGNMLGEGIVWCERAQALYWTDIQRGTLWRHAPA
                     SGETRQWPMPERLPSFALSEADGWLLLALASRLAFFHLEDGALHAICAIEPGLPTRCN
                     DGACDRQGRFVFGTLHEPADGGAKQALGSFWRLNT"
BASE COUNT          390 a          870 c          816 g          348 t
ORIGIN      
        1 ctcggcgctg tacgcgcccg gccgcccgct ggcagaaacc aagacccgcg ccgcggcgtt
       61 cgtcgccgcc tggcgccagc tggatacgca cgcatgaaga tcaccaagct caccacctac
      121 gtcgtcccgc cgcgctggac gttcctgcgc atcgacaccg acgccggcat cagcggctgg
      181 ggcgagccgg tggtggaagg ccgcgcgcac accgtggccg ccgccgtcgc cgaactcgcc
      241 gactacctcg tgggcaagga cccgcgcgcc gtcgaggacc tgtggtcggt gatgtaccgc
      301 ggcggcttct accgcggcgg gccggtgctg atgagcgcga tcgccggcgt cgaccaggcg
      361 ctgtgggaca tcaagggcaa ggatctcggc aagccggtgc acgaactgct cggtggcccg
      421 gtgcgcgagc gcatccgggt gtactcgtgg atcggcggcg accgcccggc ggacaccgcc
      481 aacgcggcga aggacgcggt ggcgcgcggc ttcaccgcgg tgaagatgaa tgccaccgag
      541 gaaatgcaat acatcgacgc ccacgccaag gtcacccacg tgctggaaaa cgtgcaggcg
      601 atccgcgacg cggtcggccc cgacatcggc atcgcgctgg atttccacgg ccgcgtgcac
      661 aagccgatgg ccaaggtgct gatgcgcgag ttgcacgcgt tcaacctgat gttcatcgag
      721 gagccggtgc tttccgatca cctcgaggcg atccccgagc tggcggcaat ctcgccggca
      781 ccgatcgcgc tgggcgagcg gctgtactcg cgctgggatt tcaagcgcgt gctgaccacc
      841 ggcggcgtgg acatcctgca gcccgacccg tcgcacgccg gcggcatcac cgagacgcgc
      901 aagatcgcgg cgatggcgga ggcgttcgac gtggcgctgg cgctgcactg cccgctcggg
      961 ccgatcgcgc tggccgccaa cctgcagctc gacgcggtgt gccacaacgc cttcatccag
     1021 gagcaaagcc tgggcatcca ctacaaccgc ggcaacgacc tgctcgacta catcactgac
     1081 cgccacgtgt tcgcctacgc cgacggctac gtggcgatgc cgaccggccc cggcctcggc
     1141 atcgaggtga acgaggccta cgtggccgaa cgcgccaagg taggccagca ttggcacaac
     1201 ccgatctggc gccacgccga cggcagcgtg gcggaatggt gatggccatg gcatccgctt
     1261 acgcgcgcta ccccagtctc gctggccgca ccgtgctggt ttccggcggc gccaccggca
     1321 tcggcgccgc cttcgtcagc catttcgcgc ggcagggcgc gcgggtcgcc tttctcgaca
     1381 tcgacgacgc cggcgccgcg gagctcttgc ccacgctggc cgacgtgcag cacctgccgc
     1441 agttcgtgca ttgcgacgtc accgacattg cggccttgca ggacgcgatc gcgacggtcg
     1501 ccggccggct cggcccgatc accgtgctgg tgaacaacgc cgccaacgac gtgcgccatc
     1561 acctgccgga cgtcgacctc gctgcctatg agcagaacct ggcgatcaac ctgcgccacc
     1621 aggtgtttgc cacccgcgcc gtcgcgcccg gcatggaggc cgccggcggc ggctcgatca
     1681 tctgcctggg ttccaccggc tggatgaaga aaaacgccga ctacccgctg tacgccaccg
     1741 ccaaggccgc cgtgcacggc ttcgtcaacg gcatggcgca cacgctcggc cagcgcaaca
     1801 tccgcatcaa cgcgctggtg ccgggctggg tgatcaccga caagcagcgc cggctgtggc
     1861 tggacgccga cggcaaggtc gagatcgccc gcgtgcagtg catgcgcggc tatctgatgg
     1921 ccgacgacat cgcgcgcatg gcgctgtttc tcggcagcga cgacagccac atgtgcaccg
     1981 ggcaaagctt cgtggtcgac ggcggctggg tgtgaacgcg ccggcgcagg tgcagcttgc
     2041 ggccggcaac atgctcggcg agggcatcgt ctggtgcgag cgcgcgcagg cgctgtactg
     2101 gaccgacatc cagcgcggca cgctgtggcg ccacgcgccg gccagtggcg aaacccggca
     2161 atggccaatg cccgaacgcc tgccctcgtt cgcgctctcc gaagcggacg gctggctgct
     2221 gctggcgctg gcgtcgcgac tcgcgttctt tcaccttgag gacggcgcgc tgcacgcgat
     2281 ctgcgcgatc gaacccggcc tgcccacgcg ctgcaacgac ggcgcctgcg accgccaggg
     2341 ccgcttcgtg ttcggcaccc tgcacgaacc cgccgatggc ggcgcgaagc aggcacttgg
     2401 cagcttctgg cgattgaaca ccaa
//
LOCUS       DASSVL010000239         3683 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_217227, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000239 DASSVL010000000
VERSION     DASSVL010000239.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3683)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3683)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3683
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_217227"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(79..1491)
                     /gene="flhF"
                     /locus_tag="VFM52_04095"
     CDS             complement(79..1491)
                     /gene="flhF"
                     /locus_tag="VFM52_04095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007080066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006614 - SRP-dependent cotranslational
                     protein targeting to membrane [Evidence IEA];
                     GO_process: GO:0044781 - bacterial-type flagellum
                     organization [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis protein FlhF"
                     /protein_id="HET8764381.1"
                     /translation="MKIKRFVAPDMRQAMREVRDEQGPDAVILSTRRVAEGIELIAAI
                     DYDEALVREAVRQEAPRAEAPAAVPPSPPPLPPRPMASAPEPSAPRRKSPLAGDDLET
                     GIAGAQKHRPQAGSRGERGRDAVDAVGMPCPTEAPNQQRAPAPAPLRREPAAADALLA
                     RSTRETAQLRGEIDDLRALLEVQLSSLGWNDLERRRPLHARVLRELTRLGIEPDVARQ
                     LAAELPDPLTAEQARYLPLGVLSRHLTVSGRSLCGDERGVTALVGPTGVGKTTTIAKL
                     AARAVMRHGAAQVALVSTDHYRIGAAAQLEHYGRLLGVQVYPAYDARSLRKVLDMLAG
                     RHAVLIDTAGVAASDPRLTQQLGLLSGVGALRVSLVLAAHAQVPALEEAVNAYRQLKP
                     QACILSKLDEAPALGGALSVLIRQKLALDYTTDGQRVPEDIAQADARALVCRAAQSLR
                     GNAPDDRVMAERFGLAMAEA"
     gene            complement(1622..3676)
                     /gene="flhA"
                     /locus_tag="VFM52_04100"
     CDS             complement(1622..3676)
                     /gene="flhA"
                     /locus_tag="VFM52_04100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017463597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009288 - bacterial-type flagellum
                     [Evidence IEA];
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis protein FlhA"
                     /protein_id="HET8764382.1"
                     /translation="MTRRGLGAPVAMLVMLAMMMLPLPPFLLDMLFSFNIALSLVILL
                     AVVYVMRPLEFAAFPTVVLMATLLRLALNIASTRVVLLHGHDGPGAAGKVIEAFGEFV
                     IGGNFAVGLVVFAIITIINFVVVTKGATRVSEVTARFTLDAMPGKQMAIDADLNAGLL
                     TQEQARERRQEVREEADFYGSMDGASKFVRGDAVAGILILAINIIGGFFIGVMQHGLS
                     AGDAAQTYTLLTIGDGLVAQVPALMLSVATAIIVTRVSKAQDMGRQLAGQVFGQPRAL
                     AVAAAVLGVMGLIPGMPNVAFLLLGAVCGGAAWLLFKRQRETREKLAAAPAEAATPAV
                     PPEKVELSWDDVASVDALGLEVGYRLIPLVDVNQGGELMGRIKSVRRKLSQDLGFLIP
                     AVHIRDNLDLGPNTYRIVLMGVPMGEAEVHTERLMAINPGQVHGTLAGIATKDPAFGL
                     DAVWIEPGQRELAQSYGYTVVDPATVIATHLSYILGNHAHELLGHQDAQQLLDRLAQS
                     APKLVEDLVPKRLSLGVVVKVLQNLLAEQVPIRNMRTIVESLAEHAGQSQDPGVLTAA
                     ARVALGRQIVQEIAGLGTEVPVITLAPELEQILLGSISGGGVAGAAVEPGLADRLQQS
                     VADAARKQEMSGEPAILLVAPQLRPWLARFTRHVAQNLHVLAYNEVPDNRRVRLVQAL
                     GR"
BASE COUNT          523 a         1322 c         1296 g          542 t
ORIGIN      
        1 cggcgccagg cgcggtggcc accatggcgg ccagcatctg cttcagcccg aacgcttgat
       61 ccatcatcat ctccccgctc atgcctcggc catcgccagg ccgaaccgct cggccatcac
      121 ccggtcgtcc ggcgcgttgc cccgcaacga ctgggcggcg cggcacacca gcgcccgcgc
      181 atcggcctgg gcgatgtcct cgggcacgcg ctggccgtcg gtggtgtagt ccagcgccag
      241 tttctgccgg atcagcaccg acaacgcgcc gcccagcgcc ggcgcctcgt cgagcttgga
      301 aagaatgcac gcctgcggct tgagctggcg ataggcgttc accgcctcct ccagcgccgg
      361 cacctgggca tgcgcggcca gcaccaggct gacccgcagc gcgcccacgc cggacagcaa
      421 cccgagctgc tgggtgagcc gcgggtcgct ggcggcgacg ccggcggtat cgatcagcac
      481 cgcgtggcgg ccggccagca tgtccagtac cttgcgcagg ctgcgcgcat cgtacgccgg
      541 gtacacctgc acgccgagca ggcggccgta atgttcgagc tgggcggcgg cgccgatgcg
      601 gtagtggtcg gtcgagacca gcgcgacctg ggccgcgccg tggcgcatca ccgcgcgcgc
      661 cgcgagcttg gcgatcgtcg tcgtcttgcc gacgccggtc gggccgacca gcgcggtcac
      721 cccgcgctcg tcgccgcaca ggctgcgccc gctcaccgtg agatggcggc tgagcacgcc
      781 cagcggcagg tagcgcgcct gctcggcggt gagcgggtcc ggcagctcgg cggcgagttg
      841 ccgggcgacg tccggctcga tgccgagccg ggtcagctcg cgcagcacgc gggcgtgcag
      901 cggccggcgg cgctccaggt cgttccaccc caggctggaa agctgcactt cgagcagcgc
      961 gcgcaggtcg tcgatctcgc cgcgcaactg cgcggtctcg cgcgtgctgc gcgccagcaa
     1021 tgcgtcggcg gcggcaggct cgcggcgcag cggggccggc gcgggcgcac gttgctggtt
     1081 cggtgcttcg gtggggcacg gcatgcccac ggcatccacg gcatcgcggc cccgctcgcc
     1141 gcgagagccc gcttgcgggc gatgcttttg cgcgcccgcg atcccggttt caagatcatc
     1201 gcccgcaagc gggctcttcc ggcgaggagc ggacggttca ggcgcactcg ccatcgggcg
     1261 cggcggcaac ggcggcgggg acggcggcac cgccgccggc gcctcggcac gcggtgcctc
     1321 ctggcgcacg gcctcgcgca ccagcgcctc gtcgtagtcg atcgcggcaa tcagctcgat
     1381 gccctcggcc acccgccggg tggacaggat caccgcatcc ggcccctgct cgtcccgcac
     1441 ctcgcgcatc gcctggcgca tgtcgggggc cacgaatcgc ttgatcttca tgtcttgctc
     1501 cgctgcttgc cgcgcaagcg ggaatccggc gtcgtgaatg gggcatcggc acgcagttcg
     1561 tgccggactc gcaacgcctt ggttctggcc tttcccattt ccggttccct actcccgatg
     1621 ttcatcgccc caacgcctgc accagccgca cgcggcggtt gtcggggact tcgttgtagg
     1681 ccagtacgtg caggttttgt gccacgtgcc gggtgaagcg tgcgagccag gggcgaagtt
     1741 gcggggcgac cagcagaatc gcgggttcgc cgctcatctc ctgcttgcgc gcggcgtcgg
     1801 cgacgctctg ctgcaggcgg tcggcgaggc cgggttcgac cgccgcgccg gccacgccgc
     1861 cgccggagat cgagccgagc aggatctgct ccagctccgg ggccagggtg atgaccggca
     1921 cctcggtgcc caggccggcg atctcctgca cgatctggcg gccgagcgcg acgcgcgcgg
     1981 cggcggtgag cacgccggga tcctgactct ggccggcatg ttccgccaag gattcgacga
     2041 tggtgcgcat gttgcggatc ggcacctgct cggcgagcag gttctgcagc accttcacca
     2101 ccacgccgag cgacagccgc ttgggcacca ggtcctcgac cagcttcggc gcactctgcg
     2161 caaggcggtc gagcagctgc tgggcatcct ggtggccgag cagctcgtgc gcgtggttgc
     2221 cgaggatgta ggacaggtgc gtggcgatca ccgtcgccgg gtcgaccacg gtgtagccgt
     2281 agctttgcgc cagctcgcgc tggcccggct cgatccacac cgcgtccagg ccgaacgccg
     2341 ggtccttggt ggcgatgccg gcgagcgtgc cgtgcacctg gccgggattg atcgccatca
     2401 gccgctcggt gtgcacctcg gcctcgccca tcggcacacc catcaacacg atgcggtagg
     2461 tgttggggcc gagatccagg ttgtcgcgga tgtgcaccgc ggggatcaaa aagcccaggt
     2521 cctgcgacag cttgcggcgc accgacttga tccgccccat cagctcgccg ccctggttga
     2581 cgtccaccag cgggatcagc cgatagccga cctcgagccc gagcgcgtcg acgctggcga
     2641 cgtcgtccca gctcagctcg accttttccg gtggcaccgc cggggtggcg gcttcggccg
     2701 gggcggcggc gagcttttcg cgggtctcgc gctggcgctt gaacagcagc cacgccgcgc
     2761 cgccgcacac cgcgccgagc agcaggaacg ccacgttcgg catgccggga atcagtccca
     2821 tcacgccgag caccgcggca gcgacggcca gcgcgcgcgg ctggccgaac acctggccgg
     2881 ccagctggcg gcccatgtcc tgcgccttgg acacgcgggt gacgatgatc gcggtggcca
     2941 ccgacagcat cagcgccggc acctgcgcga cgaggccgtc gccgatggtg agcagggtgt
     3001 aggtctgcgc ggcgtcgccg gcggacaggc cgtgctgcat cacgccgatg aagaagccgc
     3061 cgatgatgtt gatcgcgagg atcaggatgc cggcgaccgc gtcgccgcgc acgaacttgg
     3121 aggcgccgtc catcgaaccg tagaagtccg cctcctcgcg cacttcctgg cggcgttcgc
     3181 gcgcctgttc ctgggtgagc aggccggcgt tgaggtcggc gtcgatcgcc atctgcttgc
     3241 cgggcatcgc gtccagagtg aagcgcgcgg tcacctcgga cacgcgggtg gcgcccttgg
     3301 tcaccaccac gaagttgatg atggtgatga tggcgaacac caccaggccc accgcgaagt
     3361 tgccgccgat cacgaactcg ccgaacgcct cgatcacctt gcccgcggcg ccggggccgt
     3421 cgtggccgtg cagcagcacc acgcgggtgg aggcgatgtt gagcgcgagg cgcagcagcg
     3481 tggccatcag caccacggtg gggaacgcgg cgaactccag cgggcgcatc acgtagacca
     3541 ccgccagcag gatcaccagc gacagcgcga tgttgaagct gaacagcatg tcgagcagga
     3601 acggcggcag cggcaacatc atcattgcca gcatcaccag catcgccacc ggcgcgccaa
     3661 ggccccgccg cgtcagctgc ttg
//
LOCUS       DASSVL010000240         2053 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_288399, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000240 DASSVL010000000
VERSION     DASSVL010000240.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2053)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2053)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2053
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_288399"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..818)
                     /locus_tag="VFM52_04105"
     CDS             complement(<1..818)
                     /locus_tag="VFM52_04105"
                     /inference="COORDINATES: protein motif:HMM:NF027232.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8764383.1"
                     /translation="MDEALFRSLEWRCIGPHRGGRVVAVAGDPADPATFYFGACAGGV
                     WKTTSGGALWENVSDGYFGTSAIGALAVAQSAPNVVYAGTGEATIRGNVSHGDGVYKS
                     TDGGHSWQHVGLGDTRHIGDLLIHPTNPDIAYVAALGHAWGTNAERGVFRTRDGGKTW
                     EKVLYKSERAGAVDLALDPHHPDTLYATVWQTQRKPHALWSGGEESGLWRSTDGGDTW
                     TDLSRHKGLPASGVYGKIGVAASPAQPGRIWALVEASDAQGEDAGGLYRSDDWG"
     gene            1056..>2053
                     /locus_tag="VFM52_04110"
     CDS             1056..>2053
                     /locus_tag="VFM52_04110"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024629.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HET8764384.1"
                     /translation="MSFWTPGTTWGDAPGASAGFRSPSVAVERMPAMQTTVNPQALAA
                     RAANLRASYLTRERLTGATAILLYLAALDFVAHVVVGNNYGYFRDELYYMAAGRRLAF
                     GYVDFAPFIAWMAALLRLLTNDNLIALHVVSGAASAALVFTTGMIARELGAKRTAQVI
                     AALAALCNITFLAMGSIFSYDPFDELWWALAFYVFIRLTRRNQPRLWLVFGLLAGLDL
                     FTKATGLYFGLALVIGLLCTSAGRAQFRTRWIYLGGAIAFAFLLPYILWNAANGFVTL
                     QFWASYSQRLIGGSPLSFLAEQLYTMNPLTAPLWLTGLWWYLRAPAATPYRALGIV"
BASE COUNT          267 a          730 c          685 g          371 t
ORIGIN      
        1 tcgccccagt cgtccgagcg gtacaggccg ccggcgtcct cgccctgcgc gtcgctggcc
       61 tcgaccagcg cccagatgcg gccgggctgg gcgggcgagg cggcgacgcc gatcttgccg
      121 tagacgccgc ttgcgggcag ccccttgtgg cgcgaaaggt cggtccaggt gtcgccgccg
      181 tcggtggagc gccacaggcc ggactcctca ccgccactcc acagcgcgtg cggcttgcgc
      241 tgtgtctgcc agacggtggc gtagagcgtg tcggggtggt gtgggtccag cgccaggtca
      301 acggcgccgg cgcgctcgct cttgtagagc accttctccc aggtcttgcc gccgtcgcgc
      361 gtgcggaaga cgccgcgctc ggcgttggtg ccccaggcgt ggccgagcgc cgcgacgtag
      421 gcgatatcgg ggttggtggg gtggatcagg aggtcgccga tgtggcgcgt atcgcccagg
      481 cccacatgct gccagctatg gccgccgtcg gtggacttgt agacgccgtc gccgtgcgag
      541 acgttgccgc ggatcgtggc ctcgccggtg ccggcgtaga cgacgttggg cgccgactgc
      601 gcgacggcga gggcgccgat cgccgaggtg ccgaagtagc cgtcggagac gttctcccac
      661 agcgcgccgc cgctggtggt cttccagacg ccacccgcgc aggctccgaa gtagaaggtg
      721 gccggatcgg ccgggtcgcc cgccaccgcg accacgcgcc cgccgcgatg cgggccgatg
      781 cagcgccatt cgagcgatcg gaacaaggct tcatccatgg gtgatcttcc ccttgtgcct
      841 ctcggcgtgc tccgccgcgt cgcgcgtgct gatgagcggg ttgtacgacc gcgtgcaggc
      901 gtgacaccac ggagatcagt gtttgatggc catcatacct tccattgtgc gcatggcgtc
      961 aagctgaaac acgggccact tcttcgccgc gctgacgtgc ttcattatca ccaccgcgcg
     1021 caagcccgct tgacgcgctg tcaccgcgcg gcgtagtgtc cttctggact ccgggaacca
     1081 catggggaga cgcgcccggt gcaagcgcag gtttcagatc gccttccgtc gccgttgaga
     1141 ggatgccagc catgcaaacg accgtcaacc cacaggcgct cgccgctcgc gccgccaacc
     1201 tgcgcgcctc ttacctcacg cgcgagcggc tgacgggcgc caccgccatt ctgctctacc
     1261 tcgcggcgct cgatttcgtg gcccatgtgg tcgtcggcaa caactacggc tactttcgcg
     1321 acgagctgta ctacatggcc gccggccgcc gcctggcctt cggctacgtg gacttcgcgc
     1381 ccttcatcgc ctggatggcc gcgctgctgc gcctgctcac caacgacaac ttgatcgcgc
     1441 tgcacgtggt ctcgggcgcc gcctcggccg cgctggtctt cacgacgggc atgatcgcgc
     1501 gcgagctggg cgccaagcgc acggcgcagg tgatcgccgc gctggcggcg ctctgcaaca
     1561 tcaccttctt ggcgatggga tcgatcttct cgtatgaccc cttcgacgag ctgtggtggg
     1621 cgctggcgtt ctacgtcttc atccgcctca cgcggcgcaa tcagccgcgg ctgtggctgg
     1681 tcttcgggct gctcgccggc ctggacctgt tcaccaaggc caccggcctc tacttcggcc
     1741 tggcgctggt gatcgggctg ctgtgcacct ccgccggccg cgcgcagttt cgcacgcgct
     1801 ggatctacct cggcggcgcc atcgcgttcg ccttcctgct gccctatatc ctgtggaacg
     1861 ccgccaacgg cttcgtcacg ctgcaattct gggccagcta cagccagcgc ctgatcggcg
     1921 ggtcgccgct aagcttcctc gccgagcagc tttatacgat gaacccgctg acggcgccgc
     1981 tgtggctgac cggcctgtgg tggtatctgc gcgcgcccgc cgccacgccc tatcgcgcgc
     2041 tgggcatcgt cta
//
LOCUS       DASSVL010000241         2044 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1291099,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000241 DASSVL010000000
VERSION     DASSVL010000241.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2044)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2044)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2044
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1291099"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..618)
                     /locus_tag="VFM52_04115"
     CDS             complement(<1..618)
                     /locus_tag="VFM52_04115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012438731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaJ domain-containing protein"
                     /protein_id="HET8764385.1"
                     /translation="MSKRDYYEVLGVARTASEEDLKKAYRRWAMKHHPDRNPGDKAAE
                     AAFKEGKEAYEVLSDAAKRRAYDAHGHAAFEHGMGGGGGGGAGYADMGDIFGDIFGNI
                     FGGGTARGPRRGADIGYVMELDLEEAVAGVEKRIEVPTLAPCGPCKGSGSADGKVETC
                     ATCHGRGQVRMQRGIFTMQQPCPHCGGRGQVIVTPCKACHGNGRVE"
     gene            complement(714..>2044)
                     /gene="dnaK"
                     /locus_tag="VFM52_04120"
     CDS             complement(714..>2044)
                     /gene="dnaK"
                     /locus_tag="VFM52_04120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010380232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="molecular chaperone DnaK"
                     /protein_id="HET8764386.1"
                     /translation="IIEIASVDGEMQVEVLSTNGDTFLGGEDFDKRVIDYLVEEFQKD
                     QGIDLRKDPLALQRLKDAAERAKIELSSAQQTEVNLPYVTADASGPKHLNIKLTRAKL
                     EALVDDLVRKTIEPCRIALNDAGLRASDVTEVILVGGQTRMPKVQQAVGEFFGKEPRK
                     DVNPDEAVAIGAAIQGGVLAGDVKDVLLLDVTPLSLGIETLGGVMTKIIEKNTTIPTK
                     ASQTFSTAEDNQSAVTVHVLQGEREQARYNKSLARFDLSGIEPAPRGMPQVEVSFDID
                     ANGILHVSAKDKKTGKEQKVEIKAGSGLSDEEIQRMVQDAEAHREEDAKFHELVQARN
                     QADALVHATRSAIKDNGDKVPGDVIGRAEAAIAEVEAAIKSDDKGQIEAKSKALEEAG
                     QALFAAVAAAQQGGGAEAGGAQAGGAGGAPRNDDVVDAEFTEVKDDGKQG"
BASE COUNT          238 a          741 c          682 g          383 t
ORIGIN      
        1 ctcgacccgg ccgttgccgt ggcaggcctt gcacggggtg acgatgacct ggccgcggcc
       61 gccgcaatgc gggcacggct gctgcatcgt gaagatgccg cgctgcatgc gtacctggcc
      121 gcgaccgtgg caggtcgcgc aggtctcgac cttgccgtcc gccgagccgc tgcccttgca
      181 gggcccgcag ggcgcgagcg tgggcacctc gatgcgcttc tcgacgccgg cgacggcttc
      241 ctcgaggtcc agttccatca cgtagccgat gtccgcaccc cggcgcgggc cgcgcgcggt
      301 cccgccgccg aagatgttgc cgaagatgtc cccgaagatg tcgcccatgt cggcgtagcc
      361 cgcgccgccg ccgccaccgc cacccatgcc gtgctcgaac gcggcgtggc cgtgggcgtc
      421 gtaggcacgg cgcttcgccg cgtcggatag cacctcgtag gcttccttgc cctccttgaa
      481 cgcggcctcc gcggccttgt cgccgggatt gcggtccggg tggtgcttca tcgcccagcg
      541 ccggtaggcc ttcttcaggt cttcttcgga cgcggtgcgg gcgacgccca ggacttcgta
      601 gtaatcgcgc ttgctcatgg acgacaggcc gttcccctaa agcgacgggc aggtacgcct
      661 gcccgtcggg attgcttcat gcgctccgct cccgcggagc cctcgcgcgc aggtcagccc
      721 tgcttgccgt cgtccttgac ctcggtgaac tcggcatcca cgacgtcgtc gttgcgcggg
      781 gcgccgccgg cgccaccggc ctgggcaccg cccgcctccg cgccgccgcc ctgctgggcg
      841 gccgcgacag cggcgaacag ggcctggccc gcttcctcga gcgccttcga cttggcctcg
      901 atctggccct tgtcgtcgct cttgatcgcc gcctcgacct cggcgatggc ggcctcggcg
      961 cggccgatca cgtcgcccgg caccttgtcg ccattgtcct tgatcgcgct gcgggtcgca
     1021 tgaaccagcg cgtccgcctg gttgcgcgcc tgcaccagct cgtggaactt ggcgtcctcc
     1081 tcgcggtgcg cctcggcgtc ctgcaccatc cgctggatct cttcgtccga caggcccgag
     1141 ccggccttga tctcgacctt ctgctccttg ccggtcttct tgtccttggc gctgacgtgc
     1201 aggatgccgt tggcgtcgat gtcgaacgac acctccacct gcggcatgcc gcgcggcgcc
     1261 ggctcgatgc cggacaggtc gaagcgggcc agcgacttgt tgtagcgggc ctgctcgcgc
     1321 tcgccctgca gcacgtgcac ggtcaccgcg gactggttgt cctcggcggt gctgaaggtc
     1381 tgcgaggcct tggtcgggat cgtggtgttc ttctcgatga tcttggtcat cacgccgccg
     1441 agcgtctcga tgcccagcga cagcggggtc acgtcgagca gcagcacgtc cttgacgtcg
     1501 ccggcgagca cgccgccctg gatggccgcg ccgatcgcga cggcttcgtc gggattgacg
     1561 tccttgcgcg gctccttgcc gaagaactcg ccgaccgcct gctgcacctt cggcatgcgg
     1621 gtctggccgc cgacgaggat cacctcggtg acgtcggacg cgcgcaggcc ggcgtcgttc
     1681 agcgcgatgc ggcacggctc gatggtcttg cgcaccaggt cgtccaccag cgcctcgagc
     1741 ttggcccggg tcagcttgat gttgaggtgc ttcggacccg aggcgtcggc cgtcacgtac
     1801 ggcaggttca cttcggtctg ctgcgcggac gacagttcga tcttcgcgcg ctccgcggcg
     1861 tccttcaggc gctgcagcgc gagcgggtcc ttgcgcaggt cgatgccctg gtccttctgg
     1921 aactcctcga cgagatagtc gatgacgcgc ttgtcgaagt cctcgccgcc gaggaaggtg
     1981 tcgccgttgg tcgacagcac ctcgacctgc atctcgccgt cgaccgacgc gatctcgatg
     2041 atgg
//
LOCUS       DASSVL010000242         5407 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_796498, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000242 DASSVL010000000
VERSION     DASSVL010000242.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 5407)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5407)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5407
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_796498"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..491)
                     /locus_tag="VFM52_04125"
     CDS             complement(<1..491)
                     /locus_tag="VFM52_04125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013533753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinamidase"
                     /protein_id="HET8764387.1"
                     /translation="MPTAYPERTALIVVDVQPDFMPGGALACHEGDAIVAGIDRLLRA
                     RRFGTVVATQDWHPAGHASFASSHAGQRPFATIALHGQPQTLWPDHCVQGTPGAALHP
                     AIDWTAADLILRKGTNPLVDSYSGFRENHGPHGTRPSTGLAGWLRERGVDEVVVCGLA
                     RDV"
     gene            569..943
                     /locus_tag="VFM52_04130"
     CDS             569..943
                     /locus_tag="VFM52_04130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017460513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8764388.1"
                     /translation="MNYDQSWMAYGWLGGLEAGAISAAAAVVAYLAFHAIGRRHGWSD
                     ARQIGWAYLVALAATARMDAWNLFYFNFGQLQSLQLLKAKLAGVHDPDGMGTRVLCEL
                     AGVAVGIFLAWAAQRWFRHRAP"
     gene            complement(992..1828)
                     /gene="fetB"
                     /locus_tag="VFM52_04135"
     CDS             complement(992..1828)
                     /gene="fetB"
                     /locus_tag="VFM52_04135"
                     /inference="COORDINATES: protein motif:HMM:TIGR00245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron export ABC transporter permease subunit
                     FetB"
                     /protein_id="HET8764389.1"
                     /translation="MSAGYLDIGNWQLGFAAGLIVVNLALSTTLRLGITRGLLAASVR
                     MVVQLLLVGLVLDYVFALARPLPVVAIALVMAGFAGFTAVRRSTRRYAGIYLDNVLCV
                     LGASYVVTGAALVGIIDVTPWYRAQYAIPLLGMVLGNILNGVSLALNRFLDGAVRERA
                     LIEGRLALGATRWEAAHPLIVASLNTGMIPTINSMMVMGIVSLPGMMTGQMLAGAAPA
                     SAVRYQIVIMFMITAATALGTLGSVLLAYRALFSRAHQLRLDRLHAGAARTHHWWSRL
                     RA"
     gene            complement(1825..2496)
                     /locus_tag="VFM52_04140"
     CDS             complement(1825..2496)
                     /locus_tag="VFM52_04140"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HET8764390.1"
                     /translation="MTIQPHPGSPLLAVRGLGCTFGARTLWHGITLDVHGGERWAIVG
                     PSGSGKTVLLRTLAGLVPSQAGTLHLDGQTFAACAPPAWRARVMYLAQRPALPEGSVE
                     AALAEPFAWRVHRGKVFRRGEAARRLADVGLAADFLASETDRLSGGETQLVAVLRALL
                     LAPTLLLLDEPTASLDPARTAHVEALVAHWLAQDGARACIWTSHDAAQLARVSDHQLA
                     LEAAA"
     gene            complement(2504..3820)
                     /locus_tag="VFM52_04145"
     CDS             complement(2504..3820)
                     /locus_tag="VFM52_04145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012444892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015105 - arsenite transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0046685 - response to arsenic-containing
                     substance [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arsenic transporter"
                     /protein_id="HET8764391.1"
                     /translation="MLALAIFIVTLVLVVWQPRRLGIGWIAMGGAALALATGVVQLAD
                     VARVWHIVWDATFTFVALIIISLILDAAGFFTWAALHVARWGGGHGRRLFPLVVLLGA
                     AISACFANDGAALLLTPIVIAILLRLRWPPRAAFAFVIATGFIADTASLPLVISNLVN
                     IVSANFFGVGFDRYAAVMVPVDLVSIAATLGVLWLAFRRDVPARYPLARLDAPASAVV
                     DHQVFRAALPVLGGLLLAYFVLAPWRVPFCYATGAAALALLLVAARTGQRAAAVVPVA
                     RVLRAAPWQIVWFSLGMYLVVYGLGQAGLTRHAAAVLAWLGQRGEVTATVGTGLLSAL
                     LASVMNNLPSTLVGALAVAQAQVPAVTRELMVYANVIGNDLGPKFTPIGSLATLLWLH
                     VLAGKGQRVGWGQYMKVGLLLTPPVLLATLLALALWLPALHRLGAA"
     gene            complement(3846..5222)
                     /gene="cls"
                     /locus_tag="VFM52_04150"
     CDS             complement(3846..5222)
                     /gene="cls"
                     /locus_tag="VFM52_04150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007511648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008808 - cardiolipin synthase activity
                     [Evidence IEA];
                     GO_process: GO:0032049 - cardiolipin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cardiolipin synthase"
                     /protein_id="HET8764392.1"
                     /translation="MTLSLIGALVLLLHALGVLAAAHALMHTRTPQGTIAWVLGLLLL
                     PELTLIPYLFLGTNHFRGYLAHHRRIARRHLPQAGDDGTGRYTALVAMQGRPFRRGHA
                     LRLLVNGDAAFDAMFDAIAQARHTVLVQFFVIHDDALGHRLRQALLERTAAGVTVCVL
                     YDGIGSHDLPAHYVESLRAGGVAIHPFATHRWRNRFQLNFRNHRKIVVVDGKCAFVGG
                     LNVGEEYLGHRPPLAPWRDTHLELRGPAVADLQQLFADDWQWITGARPPLHPAPGACG
                     DARALVVAAGPADAQETGSLFFVAAINSARRRLWLTTPYFVPDTAVRAALRLAVLRGV
                     DVRVLIPARADHRVVFAASTLHAHHALRAGVRVFRYQPGFLHQKVVLVDDDAAAVGSI
                     NLDSRSFRLNFEVSALVVDRAFAAAVEAMLVADFGRAREVTPDEYLGAPYLQRVGMHV
                     ARLFDPLL"
     gene            complement(5238..>5407)
                     /locus_tag="VFM52_04155"
     CDS             complement(5238..>5407)
                     /locus_tag="VFM52_04155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019465225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="pyridine nucleotide-disulfide oxidoreductase"
                     /protein_id="HET8764393.1"
                     /translation="LGCQATPQGQLCHDGTPWPRLFAIGSLLRGTLWESTAMPEIRQQ
                     ARAVADQLLAD"
BASE COUNT          861 a         1889 c         2003 g          654 t
ORIGIN      
        1 cacacgtcgc gtgccagccc gcacaccacc acctcgtcca ccccgcgctc gcgcagccag
       61 ccggccagcc cggtcgaggg ccgggtgccg tgcgggccgt ggttctcgcg aaagccgctg
      121 taggaatcga ccagcgggtt cgtgcccttg cgcaggatga ggtcggccgc cgtccagtcg
      181 atggccgggt gcagcgcggc gcctggcgtg ccctgcacgc agtgatccgg ccacagcgtc
      241 tgcggctgcc cgtgcagggc gatggtggcg aacggccgct gcccggcgtg cgagctggcg
      301 aatgaggcgt gcccggccgg gtgccagtcc tgggtggcga ccacggtgcc gaaccgccgc
      361 gcgcgcagca ggcggtcgat gccggcgacg atcgcgtcgc cctcgtggca cgccagcgcg
      421 ccgccgggca tgaagtcggg ttgcacatcg accacgatca gcgcggtgcg ttcagggtac
      481 gcagtgggca tggcaagtca tcgcgagacg gggctttcaa gtctagcgcg ccggcataat
      541 ggcgccttgt gcaggcggga aggcgggaat gaattacgac caatcatgga tggcctatgg
      601 ctggctgggc gggctcgaag ccggcgccat cagcgccgcg gcggctgtcg tggcgtacct
      661 cgcgttccac gcgatcggcc ggcgccatgg ctggagcgat gcgcgccaga tcggctgggc
      721 ctacctcgtc gcgctggcgg cgaccgcacg catggatgcg tggaacctgt tctatttcaa
      781 cttcgggcag ctgcagtcgc tgcagctgct caaggcgaag ctcgccggcg tgcacgatcc
      841 cgatggcatg ggtacccgtg tgctgtgcga gctggccggc gtggccgtcg gcatcttcct
      901 ggcgtgggcg gcgcagcgct ggtttcggca ccgcgccccg tgatcccgtg gggcgggctc
      961 ggcccggcga ggctctcgcg cggccccgcc gttacgcgcg cagccggctc caccaatgat
     1021 gcgtccgcgc ggcgccggcg tgcaggcggt ccagccgcag ctggtgcgcg cggctgaaca
     1081 gcgcgcggta ggcgagcagc acgctgccga gcgtgcccag cgccgtcgcc gcggtgatca
     1141 tgaacatgat gacgatctgg tagcgcacgg cggacgccgg cgccgcgccg gccagcatct
     1201 ggccggtcat catgcccggc aggctgacga tgcccatcac catcatcgag ttgatggtgg
     1261 ggatcatgcc ggtgttgagg ctggcgacga tgagcgggtg cgcggcctcc cagcgtgtcg
     1321 cgccgagcgc gaggcggccc tcgatcagcg cgcgctcgcg caccgcgccg tcgaggaaac
     1381 ggttcagcgc gagcgacacg ccgttgagga tgttgccgag caccatgccg agcagcggta
     1441 tcgcgtattg cgcgcggtac cacggcgtga cgtcgatgat gccgaccagc gcggcgccgg
     1501 tgaccacgta cgaggcgccg agcacgcaca gcacgttgtc gaggtagatg ccggcgtagc
     1561 ggcgcgtgct gcgacgcacg gcggtgaagc cggcgaagcc ggccatcacc agcgcaatgg
     1621 cgacgaccgg cagcggccgc gccagtgcga acacgtagtc gagcaccagc ccgaccagca
     1681 gcagctgcac caccatgcgc acgctcgccg ccagcagccc gcgcgtgatg ccgaggcgca
     1741 gcgtcgtcga cagcgcgagg ttcaccacga tcagcccggc ggcaaagccg agctgccagt
     1801 tgccgatgtc gaggtagccg gcgctcatgc cgcggcctcc agcgccagct gatggtcgct
     1861 cacgcgcgcg agctgcgccg cgtcgtggct ggtccagatg caggcgcgcg cgccgtcctg
     1921 cgccagccag tgcgcgacca gcgcctcgac gtgcgcggtg cgcgccgggt cgagcgaggc
     1981 ggtgggctcg tcgagcagca gcagcgtcgg cgccagcagc agcgcgcgca gcaccgcgac
     2041 gagctgggtt tcgccgccgg acaggcggtc ggtttcgctg gcgaggaaat ccgcggcgag
     2101 gccgacgtcg gcgagccggc gcgcggcttc gccgcggcga aacaccttgc cgcgatgcac
     2161 gcgccaggcg aacggctcgg cgagcgcagc ctcgacgctg ccttccggca acgccggccg
     2221 ctgggccagg tacatcaccc gtgcgcgcca cgcgggcggc gcacacgccg cgaacgtttg
     2281 gccgtccaga tgcagcgtgc cggcctggct cggcaccagc ccggcgagcg tgcgcagcag
     2341 caccgtcttg ccgctgccgg aaggcccgac gatcgcccag cgctcgccgc cgtgcacgtc
     2401 gagcgtgatg ccgtgccaca gcgtgcgcgc gccgaacgtg cagcccaggc cacgcacggc
     2461 gagcaggggt gatcccggat gcggttggat ggtcatggca ggctcatgct gcaccaagtc
     2521 gatgcagcgc gggcagccaa agcgcgagcg ccagcagcgt ggccagcaat accggtggcg
     2581 tcagcaacag gccgaccttc atgtactgcc cccagcccac gcgctggccc ttgccggcaa
     2641 gcacgtgcag ccacagcagc gtggcgaggc tgccgatcgg ggtgaacttg gggccgaggt
     2701 cgttgccgat cacgttggcg tacaccatca gctcgcgcgt caccgccggc acttgcgcct
     2761 gggcgacggc gagcgcgccg accagggtcg acggcaggtt gttcatcacc gaggcgagca
     2821 gcgcggagag caagccggtg ccgacggtgg cggtgacctc gccgcgctgg ccgagccagg
     2881 cgaggaccgc ggccgcgtga cgggtgaggc cggcctggcc cagcccgtac accacgaggt
     2941 acatgcccag cgagaaccac acgatctgcc atggcgcggc gcgcagcacg cgcgcgaccg
     3001 gcaccacggc ggcggcgcgc tggccggtgc gcgcggcgac cagcagcagg gccagcgccg
     3061 cggcaccggt ggcgtagcag aacggcaccc gccacggcgc gagcacgaag taggccagca
     3121 gcagtccacc gagcaccggc agcgcggcgc ggaacacctg gtggtcgacg actgcgctcg
     3181 ccggcgcgtc cagccgcgcg agggggtagc gggccggcac gtcgcgccgg aacgccagcc
     3241 acagcacgcc gagcgtggcg gcgatcgaca ccaggtccac cggcaccatc accgccgcgt
     3301 agcggtcgaa gccgacgccg aagaaattcg cgctgacgat gttgaccagg ttggatatca
     3361 ccagcggcag gctcgcggtg tcggcgatga agccggtggc gatgacgaac gcgaaggcgg
     3421 cgcgcggcgg ccaccgcagg cgcagcagga tcgcgatcac gatcggggtc agcagcagtg
     3481 ccgcgccgtc gttggcgaag cacgccgaga tcgccgcgcc gagcagcact acaagcggaa
     3541 acagccggcg cccgtggccg ccaccccagc gcgcgacgtg cagcgcggcc caggtgaaga
     3601 acccggcggc gtcgaggatc agcgagatga tgatcagcgc gacgaaggtg aacgtcgcgt
     3661 cccacacgat gtgccacacg cgcgccacgt cggcgagctg caccacgccg gtggccagcg
     3721 ccagcgcggc gccgcccatc gcgatccagc cgatgccgag gcggcgtggc tgccagacga
     3781 cgagcacgag ggtgacgatg aagatggcga gggcaagcat gggtacggct gggcaaaaac
     3841 gtcgctcaca atagcggatc gaacaaccgc gccacatgca tgcccacgcg ctggaggtac
     3901 ggggcgccga ggtattcgtc cggcgtcacc tcgcgcgcgc ggccgaagtc ggccaccagc
     3961 atcgcctcga ccgcggcggc aaacgcccga tccaccacca gcgcgctgac ctcgaaattg
     4021 agccggaacg agcggctgtc gagattgatg ctgcccaccg ccgcggcgtc gtcgtccacc
     4081 agcaccactt tctggtgcag gaaacccggc tggtagcgga acacgcgcac gccggcgcgc
     4141 agcgcgtggt gcgcatgcag cgtggaggcg gcgaacacca cgcggtggtc ggcgcgcgcc
     4201 gggatcagca cgcgcacgtc cacgccgcgc agcacggcaa gccgcagcgc cgcgcgcacc
     4261 gcggtgtcgg gcacgaaata cggcgtggtc agccacagcc ggcggcgcgc cgagttgatc
     4321 gcggcgacga agaacagcga gccggtttcc tgcgcatccg ccggcccggc agcgaccacc
     4381 agcgcgcggg cgtcgccgca cgcgcccggc gccgggtgca gcggcggccg cgccccggtg
     4441 atccattgcc agtcgtcggc aaacaactgc tgcaggtcgg ccaccgccgg gccgcgcagt
     4501 tcgagatggg tgtcgcgcca cggcgccagc ggcgggcggt ggccgaggta ctcctcgccc
     4561 acgttgagcc cgccgacgaa ggcgcacttg ccgtccacca ccacgatctt gcggtggttg
     4621 cggaaattga gctggaagcg gttgcgccag cggtgcgtcg caaacggatg gatggcgacg
     4681 ccgccggcgc gcagcgactc cacgtagtgc gccggcaggt cgtggctgcc gatgccgtcg
     4741 tacagcacgc acacggtaac gccggcggcc gtacgttcca gcagcgcctg ccgcaggcgg
     4801 tggccgagcg cgtcgtcgtg gatcacgaag aactgcacca gcaccgtgtg ccgcgcctgc
     4861 gcgatggcgt cgaacatcgc gtcgaacgcc gcgtcgccgt tcaccagcag gcgcagcgcg
     4921 tggccgcggc ggaatggccg cccctgcatc gccaccagcg cggtgtagcg gccggtgcca
     4981 tcgtcgccgg cctgcgggag gtgcctgcgc gcgatgcggc gatgatgcgc aaggtagccg
     5041 cggaagtggt tggtgccgag gaacaggtat gggatcagcg tgagttcggg cagcagcaac
     5101 aagccgagca cccacgcgat cgtgccctgc ggcgtgcgcg tgtgcatcag cgcgtgcgcg
     5161 gcggcgagga cgccgagcgc gtgcagcagc aggacgaggg cgccgatcag gctgagggtc
     5221 atgcgatccc gggtgcgtca gtcagccagc aactggtcgg ccacggcgcg cgcctgctgg
     5281 cggatctccg gcatcgcggt ggactcccac agcgtaccgc gcaacaggct gccgatggcg
     5341 aacaggcgcg gccacggcgt gccgtcgtgg cacaactggc cttgcggcgt ggcctggcaa
     5401 cccaggc
//
LOCUS       DASSVL010000243         3093 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1403873,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000243 DASSVL010000000
VERSION     DASSVL010000243.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3093)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3093)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3093
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1403873"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            81..2111
                     /locus_tag="VFM52_04160"
     CDS             81..2111
                     /locus_tag="VFM52_04160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017462744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HET8764394.1"
                     /translation="MSTTGGVGKERGNTALIVLLLIAIAFAALDFWQLTVKNGEDRQA
                     VALTTQIQVLSQQTAKFALESADGNADSFRELEGTRNAIDAAVRRLNKGDPATGMSAY
                     ANVNHTPVGRAVDALNAAWGQLDGDIGKIVQNKAVVLDSAQRAAAVSQQMPLLNSSME
                     QVVNILQQRNGSADQMLGTSRQMLSADRIIRRVQEVLQGGENSLAAADGLQRDGQLYG
                     NVLQGLIDGAPGSGVTRIGDANAHKILTGMQENWNKLGDPLAKLVAAAGNLSAVKAAG
                     TKASVDSQSVLLRANDLADQIGKLPLRRFFPNVWWGLLGAVGAVAFALLLVVSLVRDQ
                     RKRFVESTSLNQRNQEAIMRLLDEMGALAEGDLTVKTTVTEEITGAIADSVNYAIDEL
                     RALVTTINETSEQVSTSAQESQTTARHLADAAEQQAQQINTATGAINEIASSLDHVSK
                     NSAESADVAERSVQIASRGAEVVRETISGMDSIRDQIQETSKRIKRLGESSQEIGSIV
                     ELINDIAEQTNILALNAAIQAASAGEAGRGFAVVADEVQRLAERSTSATKRIETLVQT
                     IQSDTNEAVSSMEQTTAEVVAGARKAEDAGSALGDIERVSHDLSALIQNISSAARQQS
                     AAATDISQSMNAIREITSQTSQGASRTADSIGTLAQLASDLRRSVAHFKLPG"
     gene            2185..>3093
                     /locus_tag="VFM52_04165"
     CDS             2185..>3093
                     /locus_tag="VFM52_04165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007507041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Hpt domain-containing protein"
                     /protein_id="HET8764395.1"
                     /translation="MRLQDNTEFSTLQWVHPELAQTLAKARESLEAYVDNPARDDALR
                     TCTGTLHQVQGTLRMVELQGPAGVVEEMETLVRALLDDRIAQRDEAYAVLMRGLMQLP
                     DYLERVAGGHRDVPVVLLPLLNELRACRGEPALPEAALFCPNLDAFLPPQAPAAMSEA
                     QADERRGEIAALRLQFQQYLLALFRSQSQAKPYAGMRKALLAIAARCFHVHGRRLWWI
                     AAGVLEGLEQGMLAAQASELRQLLGKVDRHIRQLIEHGEDALRGGDADELCSRLLYAV
                     AQARQFSPMMELLRRTYALDSLLPDAE"
BASE COUNT          544 a         1026 c         1073 g          450 t
ORIGIN      
        1 attcggtggg acggggtttc tgcgtcacgt gcgggttgcg gcagcgtgat cggtctggtt
       61 gaagaacggg tgaggtgaac atgagcacta cagggggcgt cggcaaggag cggggcaata
      121 ccgcgctcat tgtcctgctg ctgatcgcga tcgcgtttgc cgcgctcgat ttctggcagc
      181 tcaccgtcaa gaacggcgaa gaccgccagg cggtggcact gaccacgcag atccaggtgc
      241 tgtcgcagca gaccgcgaag ttcgcgctgg agtccgccga cggcaacgcg gattcgttcc
      301 gcgagctcga aggcacccgc aatgcgatcg acgccgcggt gcgccgcctc aacaagggcg
      361 acccggccac cggcatgagt gcctacgcca acgtcaacca cacgccggtc gggcgcgcgg
      421 tggacgcgct caacgccgcc tggggccagc tcgacggcga catcggcaag atcgtgcaga
      481 acaaggcggt ggtgctcgat tccgcgcagc gcgccgctgc cgtctcgcag cagatgccgc
      541 tgctcaactc gagcatggag caggtggtca acatcctgca gcagcgcaac ggcagcgccg
      601 accagatgct cggcacctcg cgccagatgc tgtccgccga ccgcatcatc cgccgcgtgc
      661 aggaagtgct gcagggtggc gagaattcgc tcgcggccgc cgacggcctg cagcgcgacg
      721 gccagctgta cggcaacgtg ctccagggcc tcatcgacgg tgcgccgggc agcggcgtga
      781 cccggatcgg cgacgccaac gcgcacaaga tcctgaccgg catgcaggag aactggaaca
      841 agctcggcga cccgctcgcc aagctggttg cggcggccgg caacctgtcg gcggtgaagg
      901 ccgccggcac caaggcctcg gtggattcgc agtcggtgct gctgcgcgcc aacgacctcg
      961 ccgaccagat cggcaagctg ccgctgcggc gcttcttccc gaacgtgtgg tggggcctgc
     1021 tcggcgcggt cggcgcggtg gcgttcgccc tgctgctggt ggtcagcctg gtgcgcgacc
     1081 agcgcaagcg tttcgtcgaa tccacctcgc tcaaccagcg caaccaggag gcgatcatgc
     1141 gcctgctgga cgagatgggg gcgctggccg aaggcgacct gacggtgaag accacggtga
     1201 ccgaggagat caccggcgcc atcgccgact cggtgaacta cgccatcgac gagctgcgcg
     1261 ccttggtgac cacgatcaac gagacctccg agcaggtttc cacctcggcg caggagtcgc
     1321 agaccaccgc ccgccacctg gccgatgcgg ccgagcagca ggcgcagcag atcaacaccg
     1381 ccaccggcgc catcaacgag atcgccagct cgctcgacca tgtgtcgaag aactcggccg
     1441 agtcggccga cgtggccgaa cgaagcgtgc agatcgcctc gcgcggcgcc gaggtggtgc
     1501 gcgagacgat ctccggcatg gactcgatcc gcgaccagat ccaggaaacg tccaagcgca
     1561 tcaagcggct gggcgaatcc tcgcaggaaa tcggctccat cgtggaactc atcaacgaca
     1621 tcgccgagca gaccaatatt ctggccttga acgcggcgat ccaggcggct tcggccggcg
     1681 aggcgggccg cggtttcgcc gtggtcgcgg acgaagtgca gcgcctggcc gagcgctcga
     1741 ccagcgccac caagcgcatc gagaccctgg tgcagacgat tcagtccgat accaacgaag
     1801 cggtaagctc gatggagcag accaccgccg aggtggtggc cggcgcgcgc aaggcggagg
     1861 acgccggcag cgcgctgggt gacatcgaac gcgtgtcgca cgacctgtcg gcgctgattc
     1921 agaacatctc cagtgcggcg cgccagcagt cggcggcggc caccgacatt tcgcaatcga
     1981 tgaacgcgat tcgcgaaatc acctcgcaga cctcgcaggg cgccagccgc accgctgatt
     2041 cgatcggtac gctggcccag cttgccagcg acctgcgccg gtcggtggcc cacttcaagt
     2101 tgccgggttg atggcgggca ttggcagacg gtggcagtca cggccggcga tggacgccgg
     2161 tcgcgcaacc gctgagagaa gcgcatgaga cttcaagaca ataccgagtt cagcaccttg
     2221 cagtgggtgc atccggagct ggcgcagacg ctggcgaagg cgcgcgagtc gctggaagcc
     2281 tacgtcgaca acccggcacg cgacgatgcc ctgcgcacct gcaccggcac cttgcaccag
     2341 gtgcagggca ccttgcgcat ggtcgagctg caagggccgg cgggtgtcgt cgaggagatg
     2401 gaaaccctgg tgcgggcgtt gctggacgac cgcattgccc agcgcgacga ggcctatgcc
     2461 gtgttgatgc gcggcctgat gcagttgccg gattacctcg agcgcgtggc cggcggccat
     2521 cgcgacgtgc cggtggtgct gctgccgctg ctgaacgagc tgcgcgcgtg ccgcggcgag
     2581 ccggcgctgc ccgaggcggc actgttctgt cccaatctcg acgcgttcct gccgccgcag
     2641 gcaccagccg cgatgagcga ggcgcaggcg gacgagcggc gtggcgagat cgcggcgctg
     2701 cgcctgcaat tccagcaata cctgctggcg ttgttccgca gccagtcgca ggccaagcca
     2761 tacgccggca tgcgcaaggc attgctggcg atcgccgcgc gctgcttcca cgtgcatggt
     2821 cgccgcttgt ggtggatcgc cgccggcgtg ctcgagggtc tcgaacaagg catgttggcc
     2881 gcgcaggcca gcgagttgcg ccagttgctg ggcaaggtgg atcgccatat ccgccagttg
     2941 atcgagcacg gcgaggacgc cttgcgcggc ggtgacgccg acgagctgtg cagccgcctg
     3001 ctgtacgccg tggcacaggc gcgccaattc agcccgatga tggagctcct gcgacgcacc
     3061 tacgcgctcg acagcctgct gccggacgcc gag
//
LOCUS       DASSVL010000244         4426 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_19830, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000244 DASSVL010000000
VERSION     DASSVL010000244.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 4426)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4426)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4426
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_19830"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2470
                     /locus_tag="VFM52_04170"
     CDS             <1..2470
                     /locus_tag="VFM52_04170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007513440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8764396.1"
                     /translation="PAGRLRGVVHGGAVAVLALAVLWSLPFAAGELQVALHPQLERGA
                     SGAPVQVQFVEPDAAQAPTAKRMAAMEAAQAPAAPAPSAGFALRQPHVVMMAPPPGIA
                     PARGPVEIGGVVQAGGGMPAWNQGNDYPLGWSGPVTATQAMHLVVAPRWLVRLLRVAL
                     IVLLAALLAKLALTLRPWSLRLPAWHSQAAAGLLLLAVAGMPLAAHAQSLPDQALLDQ
                     LKARLLEAPKCAPDCAQVAQANFAVNGDALDLALEIHAGADVAVPLPQPGAGLQLAGA
                     RLDGQATAVVAPDGNALVRVDRGVHRVDLHYQLTGGDSASLQFALPPQRVAFSGPGWT
                     LDGVDGDRLLGDSVTLQRTPAAGSAATAPAQAFPPYVRVARILRLGVDWQVENRVTRI
                     APAHGGFSVSVPLLPGEHPLGANAVVKDGRIDVTFNADATTVRWESRLDHAATLALTA
                     PPLGERAEVWRVEATPLWHVEASEVPPSADGAGLRFQPLPGETLHLALRQPAAVAGGS
                     LAFDRVAAQTRIGERASETTLDLAARSTRGGEHAITLPAGVELVDARRDGAPLNLVIR
                     DGKLGLPVLPGTHDYQLRLREPGGIAARIRGVALALGAPVANIGTGLDLPHDRWVLWT
                     WGPTTGPAVLYWSQLVVLLGVAWLLARYAPTPLRRRHWVLLGLGFSAFAWSAFALVAA
                     WLVLFGLRARAANPQAWRRWLFNLAQIGLAALTVLAVATLVVAVPKGLLGVPDMHVAG
                     NDSTATALRWFADRSAGTLPATGVVSVSLWWYKLAMLAWALWLAFALVDWLRWIFAAW
                     SHGGYWRRAVPPPLPPSASEAPRD"
     gene            2463..3290
                     /gene="prmC"
                     /locus_tag="VFM52_04175"
     CDS             2463..3290
                     /gene="prmC"
                     /locus_tag="VFM52_04175"
                     /EC_number="2.1.1.297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017463990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA];
                     GO_process: GO:0018364 - peptidyl-glutamine methylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor N(5)-glutamine
                     methyltransferase"
                     /protein_id="HET8764397.1"
                     /translation="MIDVRAWLANATMQLGARAEAEMLLLHVARKPRSWLFAHSGDAL
                     PVEVQAAADALVERRARGEPVAYITGRRGFWTLDLDVTPATLIPRVETELLVELALAR
                     LPINLPLRVADLGTGSGAIALSIAGERPRTHVLATDVSGDALAVARRNAQRLGFGNLR
                     FAQGDWLAPLADECFDLVVSNPPYIETGDPHLGQGDLRYEPTVALTSGADGLAAIRHI
                     VAGAGAHLVPGGWLLFEHGWQQGDVARALLDAAGFTRVFTAQDAEARDRVSGGARRA"
     gene            3420..4232
                     /locus_tag="VFM52_04180"
     CDS             3420..4232
                     /locus_tag="VFM52_04180"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HET8764398.1"
                     /translation="MHEILVHVREPGADTLAVQHALKLAATTGSALTGLYAAPLYFGS
                     AIEPALAAALIEETRRLVAAALAAKQAFVDRATTAGVPRVDWLVAEGSSSEALAQVAP
                     RHDLLVLDHAAGDTGPGSDVPGIVLRTGIACLVLPRAPAALGKPARIAIGWNGSAEAM
                     RAMHAAASLLPGAEVLLMQGEERERYPGLGWYPPFVVADWLGARGAQVTAQTITERAD
                     AAGGALLARAEAFGADLLVMGAYGRGRLSEWVLGGATRDVLRLARMPLLLHH"
BASE COUNT          525 a         1556 c         1705 g          640 t
ORIGIN      
        1 gccggcgggg cggctgcgcg gcgtagtgca tggcggcgcg gtcgcggtgc tggcgctcgc
       61 ggtgttgtgg agcctgccgt tcgcggcggg cgagctgcag gtggcgttgc atccgcagct
      121 tgagcgcggc gcgtcgggtg cgcccgtgca ggtccagttt gtcgagccgg atgcggcgca
      181 ggcgccgacc gcgaaacgca tggccgcgat ggaggccgca caggcgccgg cggcgcccgc
      241 gccgtccgcc gggttcgccc tgcgccagcc gcacgtcgtg atgatggcgc cgccacccgg
      301 catcgcgccg gcgcgcggcc cggtcgagat cggcggcgtg gtgcaggcgg gcggcggcat
      361 gccggcctgg aaccagggca acgactatcc actcggctgg tccggcccgg tcaccgcgac
      421 gcaggccatg cacctggtcg tcgcgccacg ctggctggtg cgcctgctgc gcgtggcgct
      481 gatcgtgctg ctcgcggcgc tgctcgcgaa gctggcgttg acgctgcggc cgtggtcgct
      541 gcggctgccg gcgtggcact cgcaggcggc cgccgggttg ctgctgctgg cggtcgccgg
      601 catgccgctg gccgcgcacg cgcaaagcct gcccgaccag gcgctgctcg accagctcaa
      661 ggcgcgattg ctggaagccc cgaagtgcgc gccggattgc gcgcaggtcg cgcaggcgaa
      721 cttcgcggtg aacggcgacg cgctcgacct cgcgctggaa atccacgccg gcgccgacgt
      781 ggcggtgccg ctgccgcagc ctggcgccgg cctgcaactg gccggcgcca ggctcgatgg
      841 ccaggcgacg gcggtcgtgg cgccggacgg caatgcgctg gtgcgcgtcg accgcggcgt
      901 gcatcgcgtc gacctgcatt accagctgac cggcggcgac agcgccagcc tgcagttcgc
      961 gttgccgccg cagcgcgtcg ccttcagcgg accgggctgg acgctcgacg gcgtggacgg
     1021 cgaccgcctg ctcggcgaca gcgtgacgtt gcagcggaca cctgccgccg gcagcgccgc
     1081 cacggcgccc gcgcaggcgt tcccacccta cgtgcgcgtg gctcgcatcc tgcggctggg
     1141 cgtcgactgg caggtggaaa accgggtgac gcgcatcgcg cccgcgcacg gcggcttcag
     1201 cgtgagcgtg ccgttgctgc ccggcgagca cccgctcggt gcgaatgcgg tggtgaagga
     1261 cggccgcatc gacgtcacct tcaacgccga cgcgacgacc gtgcgctggg aaagccgcct
     1321 cgaccacgcc gccacgctcg cactgacggc gccgccgctc ggcgaacgcg ccgaggtctg
     1381 gcgggtggag gcgacgccgc tgtggcatgt cgaggccagc gaagtgccgc cgagcgccga
     1441 tggcgccggc ctgcgcttcc agccgctgcc gggcgagacc ctgcacctgg cgttgcgcca
     1501 gccggcggcg gtcgctggcg gcagcctcgc gttcgatcgc gtggcggcgc agacccgcat
     1561 cggcgagcgc gccagcgaga ccacgctcga cctcgccgcg cgcagcacgc gcggcggaga
     1621 gcacgccatc accttgccgg ccggggttga actcgtcgac gcgcgccgcg acggcgcgcc
     1681 gctgaacctc gtcatccgcg acggcaagct tggtttgccg gtgctgccgg gcacgcacga
     1741 ttaccagctg cgcctgcgcg agccgggcgg catcgccgcg cggatacgcg gcgtggcgct
     1801 ggcgcttggc gcaccggtgg cgaacatcgg gaccgggctc gaccttccgc acgaccgctg
     1861 ggtgctgtgg acatgggggc cgacgaccgg gccggcggtg ctgtactggt cgcagctcgt
     1921 cgtgctgctg ggggtggcgt ggctgctcgc gcgctacgcg cccacgccgt tgcggcggcg
     1981 ccactgggtg ctgctcgggc tgggcttttc cgcgtttgca tggagcgcgt tcgcgttggt
     2041 cgcggcgtgg ctggtgctgt tcgggctgcg tgcgcgcgcg gccaacccgc aggcgtggcg
     2101 gcgctggctg ttcaacctcg cgcagattgg ccttgctgcg ctcaccgtgc tggcggtggc
     2161 gaccctggtc gtcgccgtgc cgaagggcct gctcggcgtg ccggacatgc acgtggccgg
     2221 caacgactcg acagccactg cactgcgctg gtttgccgac cgcagtgccg gcacgctgcc
     2281 ggccaccggc gtcgtgagcg tgtcgctgtg gtggtacaag ctggcgatgc tggcgtgggc
     2341 gctgtggctt gcattcgcgc tggtcgactg gttgcgctgg atcttcgcgg cgtggagcca
     2401 cggcggctac tggcgccgtg ccgtgccgcc accgctgcca ccttccgctt cggaggcacc
     2461 ccgtgattga tgtacgcgcg tggctggcga acgccaccat gcaactcggc gcgcgcgccg
     2521 aggccgaaat gctgttgctg catgtggcac gcaagccgcg cagctggctc ttcgcgcact
     2581 ccggcgacgc cttgccggtg gaggtccagg cggctgccga tgcgctggtc gagcgccgcg
     2641 cccggggcga gccggtggcc tacatcaccg gccgccgcgg attctggacg ctcgacctcg
     2701 acgtgacgcc ggccacgctg attccgcgcg tggagaccga acttctcgtc gaactcgcgc
     2761 tggcgcggtt gccgatcaac ctgccgctgc gggtggccga tctgggcacg ggcagcggcg
     2821 ccattgcgtt gtcgatcgct ggcgagcgcc cgcgcaccca cgtcctggcg accgacgtca
     2881 gcggcgacgc tctcgcggtg gcccgccgca acgcgcagcg cctcgggttc ggcaacctgc
     2941 gcttcgcgca gggcgactgg ctggcgccgc tggccgacga atgcttcgat ctcgtcgtgt
     3001 ccaacccgcc ctacatcgag actggcgatc cgcacctcgg gcagggcgac ctgcgctacg
     3061 agccgaccgt tgcgctcacc tccggcgcgg atggactggc cgccatccgc cacatcgtgg
     3121 ccggtgccgg cgcgcatctg gtgccgggcg gctggctgtt gttcgagcat ggttggcagc
     3181 agggcgacgt cgcccgggcg ctgctcgacg cggcgggttt cacccgggtg ttcaccgcgc
     3241 aggatgccga agcgcgcgat cgcgtgagcg gcggcgcgcg cagggcgtga aggcgggggg
     3301 caggcaaccg gcgcacggat gcgcccgcca cgccggaaag tgacgagaat caagcatccg
     3361 tggcgtacac ggtggaagct ggcgccacgg ttccaacccg ttcgaggagg cagcgagcca
     3421 tgcacgagat cctggtccat gtgcgtgaac ccggcgcgga tacgctggcc gtgcagcacg
     3481 ccctgaaact ggctgcgacc accggctccg cgttgaccgg cctgtacgcg gcaccgctgt
     3541 atttcggctc ggcgatcgaa ccggcgctgg cggccgcgct gatcgaggaa acccgccggc
     3601 tggtggcggc cgcgctggcc gcgaagcagg cgttcgtcga tcgcgccacc acggccggcg
     3661 tgccgcgcgt cgactggctg gtggccgagg gcagcagcag cgaggcactg gcgcaggtgg
     3721 ccccgcggca tgacctgctg gtgctcgacc acgctgccgg cgacaccggc ccgggatcgg
     3781 acgtgccggg catcgtgctg cgcaccggca ttgcctgcct ggtgctgccg cgcgcgccgg
     3841 ccgcactcgg caagccggcg cgcatcgcca tcggctggaa tggctcggcc gaagcgatgc
     3901 gcgccatgca tgcggccgcc tcgctgctgc cgggggccga ggtgttgctg atgcagggcg
     3961 aggagcgcga gcgctacccc gggcttggct ggtatccgcc gttcgtggtc gccgactggc
     4021 tgggcgcacg cggcgcgcag gtgacggcgc agaccatcac ggaacgcgcc gacgccgccg
     4081 gtggcgcgct gctggcgcgg gccgaggcat tcggcgccga cctgctggtg atgggcgcct
     4141 acgggcgcgg ccggctcagc gagtgggtgc tgggcggcgc tacccgcgat gtgctgcgcc
     4201 tggcgcgcat gcccttgctg ctgcaccact gacgacggca agcggcctgc ggcgccgggg
     4261 tgatcgggga cgagcgtccg cgagtcgcgg agatgttgaa gaccaaccgg cggtagcgct
     4321 tgagcccggg tgatcgccgc aagctgccgc cgggtcggcc ggggtgtacc ggcatcggtg
     4381 gcgcggcggc aactcgtgtg gtcgtggcgt cgaacgcgaa ccacgt
//
LOCUS       DASSVL010000245         6221 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_881457, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000245 DASSVL010000000
VERSION     DASSVL010000245.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 6221)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6221)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6221
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_881457"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..935)
                     /gene="lldD"
                     /locus_tag="VFM52_04185"
     CDS             complement(<1..935)
                     /gene="lldD"
                     /locus_tag="VFM52_04185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008573929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004457 - lactate dehydrogenase activity
                     [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_process: GO:0006089 - lactate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FMN-dependent L-lactate dehydrogenase LldD"
                     /protein_id="HET8764399.1"
                     /translation="MIISSARDYRAAAQRRLPPFLFHYIDGGAYDEATMRRNVSDLQA
                     LALRQRVLREVGDVDLATTLFGEELNLPVILGPVGLTGMYARRGEVQAARAAAGKGVP
                     FTLSSVSVCPIEEVQGQVARPIWFQLYVLKDRGFMRNALERAWAAGVRRLVFTVDMPV
                     PGARYRDAHSGMSGPFAAWRRIAQAACHPRWAWDVGLRGRPHDLGNVSAYLGHRIALE
                     DYIGWLGKNFDPAIGWKDLQWIRDAWQGSMILKGILDPEDAREAVRFGADGLIVSNHG
                     GRQLDGVLSSVRALPPIADVVQGDLTILADSGVRTG"
     gene            1140..1853
                     /locus_tag="VFM52_04190"
     CDS             1140..1853
                     /locus_tag="VFM52_04190"
                     /inference="COORDINATES: protein motif:HMM:NF012402.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HET8764400.1"
                     /translation="MAIYDTKIVGKNPVADGTMEFLLEKPAALKYRAGQFFDIILTAK
                     PGAEKSSYVHGFSFASAPCEPNLVAATRMRGTPFKNTIRDLPIGTPVKIDAVFGSFTL
                     HKDTKVPAVFIIGGVGITPVRSIIAQSTHDQSGHALTLIYANDTPARAPYVNDLKGFA
                     KANPNFRFVQTFTQAPGAAGDEHGRVDAAMIKRHVKDIMAPIYYLSGPAGMVRATRET
                     LMGMGVDEDNIRTEEFEGY"
     gene            complement(1926..2171)
                     /locus_tag="VFM52_04195"
     CDS             complement(1926..2171)
                     /locus_tag="VFM52_04195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008208458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDCCVxC domain-containing (seleno)protein"
                     /protein_id="HET8764401.1"
                     /translation="MATVVDAGFVRASTLTCPRCGHASRQAMPTDACQWFWECPACHE
                     VLRPKPGDCCVFCSYGDVPCPSVQQRRARQAAAGARA"
     gene            2238..2636
                     /locus_tag="VFM52_04200"
                     /pseudo
     CDS             2238..2636
                     /locus_tag="VFM52_04200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010960620.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family DNA-binding protein"
     gene            complement(2671..3435)
                     /locus_tag="VFM52_04205"
     CDS             complement(2671..3435)
                     /locus_tag="VFM52_04205"
                     /inference="COORDINATES: protein motif:HMM:NF013648.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helical backbone metal receptor"
                     /protein_id="HET8764402.1"
                     /translation="MRVFSHTCSNTEIVCALGCAAMLVGVDADSDYPPEAVAGLPKTG
                     RDLNLDIDAVRVLAPDLVLTSLTVPGHEKVVAALEAAGMPVLVCDPQSLDDVYGDIRR
                     IAVALGVAARGEQLVADMEAAMPAVAVAGARPRVLVEWWPKPVIAAARHSWVNALIQR
                     AGGMNPWADFDAKSVPQENADAAALAPDVVVMSWCGVKVAHYRADVVERRDGWAAVPA
                     VVQHRIVPISEEFLGRPGPRLVEGYRRLRAAIAAVV"
     gene            3488..4201
                     /locus_tag="VFM52_04210"
     CDS             3488..4201
                     /locus_tag="VFM52_04210"
                     /inference="COORDINATES: protein motif:HMM:NF015168.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin domain-containing protein"
                     /protein_id="HET8764403.1"
                     /translation="MTDFDRNTLATATSPYLRQHAGNPVHWQTWNADTLAHARETDTP
                     ILLSAGYSACHWCHVMAHECFENPVIAQAMNARFVCIKLDREERPDIDRVYQLAHQAL
                     HGRGGGWPLTAFIDPQDLAPFFTGTYFPPAPRHGLPAFGDVLVRVRDYFDTHRDALRE
                     QASALRDWLAQAETQPAAALPTAATTRALALERLGANFDAQHGGSAGAPKFPRATELE
                     WLLDVPADAARAMARTTLR"
     gene            4202..5635
                     /locus_tag="VFM52_04215"
     CDS             4202..5635
                     /locus_tag="VFM52_04215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8764404.1"
                     /translation="MARRGLQDHLGGGFFRYCVDADWTIPHFEKMLYDNAQLLPVYAR
                     AAADPAFDAGTRALAQRAASGIVDWLERDMLRADGGFASSMDADSEHEEGKFYLWTRE
                     SMATALDTRLAGLALRAYGLDRAPNFEGRAWHLVRDEPVEALAASMQRGPNEVEQDLE
                     TAREALLAARTQRTPPGRDDKALTAWNALAIAGLARSALVLDDAGCAALAQRALDSLR
                     RGAWLDGKLYANIAPPAARIPGFLDDHAFLLDALLDMLQWRFDPGDLAWAVALADALL
                     ERFSDTASGAFWFAAADHATPLARGRSFTDDALPNGNAVAIRALLRLGHLLGETRYLD
                     AAERALQAGASTLVQLPAACPTLLRAQAEAAQPRLQLVVRCTPAQAATWRMAMRGALA
                     QNRLPLGNDAIDVFVIDMPADALPGVLGARTVATPHGSAQICTGLTCQAPLTEPADLV
                     AAVREVHAPQVSWAGVQPDNAPIKPPG"
     gene            complement(5661..>6221)
                     /locus_tag="VFM52_04220"
     CDS             complement(5661..>6221)
                     /locus_tag="VFM52_04220"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008210825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase"
                     /protein_id="HET8764405.1"
                     /translation="YTEQVIEAVLPVLQASNGRAFLLFTSHRALRRAAELLQDKVPWP
                     LFVQGRAPRHQLLEEFRRSGHGVLLGAASFWEGVDVVGEALSVVVIDKLPFAAPDDPV
                     LVARLEALEEQGINPFMGWQVPAAAIALKQGAGRLIRSITDRGVLVLGDPRLTTKGYG
                     KLFLASLPPMPRTRDLVDVQAFFREG"
BASE COUNT          988 a         2308 c         2074 g          851 t
ORIGIN      
        1 ccggtgcgca cgccggaatc ggcgaggatg gtcaggtcgc cctgcaccac gtcggcgatc
       61 ggcggcaggg cgcgcacgga ggacagcacg ccgtcgagtt ggcgcccgcc gtggttggag
      121 acgatgaggc cgtcggcgcc gaagcgcacg gcctcgcgcg catcctcggg gtcgaggatg
      181 cccttgagga tcatcgagcc ctgccaggca tcgcggatcc actgcaggtc cttccagccg
      241 atcgccgggt cgaaattctt gcccagccag ccgatgtagt cctccagcgc gatgcggtgg
      301 ccgaggtagg cggacacgtt gccgaggtcg tgcggccggc cgcgcaggcc cacgtcccac
      361 gcccagcgcg gatggcacgc ggcctgcgca atgcggcgcc acgccgcgaa cgggccggac
      421 atgcccgaat gcgcgtcgcg gtagcgcgcg ccgggcaccg gcatgtccac ggtgaacacc
      481 aggcggcgca cgccggcggc ccacgcgcgt tcgagcgcgt tgcgcatgaa gccgcgatcc
      541 ttcagcacgt agagctggaa ccagatcggc cgcgccacct gcccctgcac ctcctcgatc
      601 gggcacaccg acacgctgga cagcgtgaac ggcacgccct tgccggcggc ggcgcgcgcg
      661 gcctgcacct cgccgcgccg cgcgtacatg ccggtcaggc cgaccgggcc gaggatcacc
      721 ggcaggttga gttcctcgcc gaacaaggtg gtcgccaggt cgacgtcgcc cacctcgcgc
      781 agcacgcgct ggcgcaacgc gagcgcctgc aggtcgctga cgttgcgacg catcgtcgcc
      841 tcgtcgtacg cgccgccgtc gatgtagtgg aacaggaagg gcggcaggcg tcgctgcgct
      901 gccgcgcggt aatcgcgtgc ggaggaaatg atcatggtgg cggcactctg tacccgcgca
      961 gccaccgctg caacacgcct gcgccccgca gccgcccgca atcacgcggc cttggcaggc
     1021 agcgaatcta tactggcgaa gttcggcact gacgccgcga tcgacgtatc gcccgccgtc
     1081 gccccaaccg gatcgcgcgc accgcgcccc gtttcattcg tcatcgcacg aggagcctca
     1141 tggccattta cgacaccaag atcgtcggca agaacccggt tgccgacggc acgatggagt
     1201 tcctgctgga aaaacccgcc gcactgaagt accgcgccgg gcagttcttc gacatcatcc
     1261 tcaccgccaa gccgggcgcc gagaagagca gctacgtgca cggtttctcg ttcgccagcg
     1321 cgccgtgcga acccaacctc gtcgccgcca cgcgcatgcg cggcacgccg ttcaagaaca
     1381 ccatccgcga cctgccgatc ggcacgccgg tgaagatcga cgcggtgttc ggcagtttca
     1441 cgctgcacaa ggacaccaaa gtgcccgcgg tgttcatcat cggcggcgtc ggcatcacgc
     1501 cggtgcgcag catcatcgcg cagtccaccc acgaccagtc cggccacgcg ctcaccctga
     1561 tctacgccaa cgacacgccg gcgcgcgcgc cctacgtcaa cgacctcaag ggctttgcga
     1621 aggcaaaccc gaacttccgc ttcgtgcaga ccttcaccca ggccccgggt gccgccggcg
     1681 acgagcatgg ccgcgtggac gcggcgatga tcaagcgcca tgtgaaggac atcatggcgc
     1741 cgatctacta cctctccggc cccgccggca tggtgcgcgc cacgcgcgaa acgctgatgg
     1801 gcatgggcgt ggacgaggac aacatccgca ccgaggaatt cgaggggtat tgagcccgca
     1861 cgctcgcgtt gcatggaaac gcccggtgca agccgggcgt tttcgtttgt gcggaaaccg
     1921 ccgtgctacg cgcgcgcgcc ggccgctgcc tgccgcgcac ggcgctgttg caccgacggg
     1981 cacggcacgt cgccgtacga acagaacacg cagcagtcgc cgggcttcgg cctcagcact
     2041 tcgtggcacg ccgggcattc ccagaaccac tggcaggcat ccgtcggcat cgcctgccgg
     2101 ctggcatgcc cgcaacgcgg gcaggtgagc gtggatgcgc gcacaaaccc tgcatcgaca
     2161 accgttgcca tggcgggcct ccgatttccg tggacgcact aagcttgcgt ccgtagtcga
     2221 ctacggagtc aaggcccatg cgcaacactc aacccggcct caccatcggc gccctggcga
     2281 aggcgaccgg gatcggcatc gaggccatcc gcttctacca gcaccgcggc ctgctgccca
     2341 cgccgccgcg cgaaccgggg caaatccggc gctacggcaa cgccgcggtc gaacgcctgc
     2401 atttcgtcaa gcgcgcacag cgcgccggct tcagcctcga cgaggtggcg agcctgctgc
     2461 agctggacga cggcacgcat tgcgcggaag ccgcgaagat cgccgccgca cgcctcgccg
     2521 aagtgcgcgt gcggctggcc gacctgcagc acatcgaagc cgcgctgggc gaactcgtca
     2581 cccgctgcgg cggacggcgc ggccgggtgt cctgcccgct gatcgccgcg ctgcatgcgg
     2641 acgccgtgcc ggcgcccgtc accacggcga tcaaaccacc gcggcaatcg ccgcgcgcaa
     2701 gcgccgatac ccctcgacga ggcgcgggcc ggggcggccg aggaactcct cgctgatcgg
     2761 cacgatgcgg tgctgcacga ccgccggcac cgccgcccag ccatcgcgcc gttcgaccac
     2821 gtcggcgcgg taatgcgcca ccttcacccc gcaccagctc atcaccacca cgtcgggggc
     2881 cagcgccgcc gcgtcggcgt tctcctgcgg cacgctcttg gcatcaaagt ccgcccacgg
     2941 gttcatgccg ccggcgcgct ggatcagcgc gttcacccac gagtgccgcg ccgccgcgat
     3001 caccggcttg ggccaccact ccaccagcac gcgcggccgt gcgccggcca ccgccacggc
     3061 gggcatcgcc gcctccatgt ccgcgacgag ctgctcgccg cgcgccgcga cgccaagcgc
     3121 gacggcgatg cggcggatgt cgccgtacac gtcatccagc gattgcgggt cgcagaccag
     3181 caccggcatg ccggccgctt cgagcgcggc cacgaccttc tcgtggcctg gcacggtgag
     3241 cgaggtcagc accaggtcgg gcgccagcac gcgcactgcg tcgatgtcga ggttcagatc
     3301 acggccggtc ttcggcaagc cggccacggc ttcgggcggg tagtccgaat ccgcatccac
     3361 gccgaccagc atcgccgcgc aacccagcgc gcagacgatc tcggtgttgg aacaggtgtg
     3421 agaaaagacg cgcatgggac ttccctcggg caaggtgcct agtgtgacgc cgcgctagca
     3481 tcgctgcatg accgacttcg atcgcaacac cctcgccacg gccaccagtc cctacctgcg
     3541 ccagcacgcc ggcaatccgg tgcattggca aacctggaac gcggacacgc tggcgcatgc
     3601 gcgcgagacg gatacgccga tcctgctttc cgccggctac agcgcctgcc actggtgcca
     3661 cgtgatggcg cacgagtgtt tcgagaaccc ggtcatcgcg caggcgatga acgcgcgctt
     3721 cgtgtgcatc aagctcgacc gcgaggagcg gccggacatc gaccgcgtct accagctcgc
     3781 gcatcaggcg ctgcatgggc gcggcggcgg ctggccgctc accgcgttca tcgacccgca
     3841 ggacctggcc ccgttcttca ccggcaccta tttcccgcct gcgccgcgcc acggcctgcc
     3901 cgcctttggc gacgtgctgg tgcgcgtgcg tgattacttc gacacccacc gcgacgcgct
     3961 gcgcgaacag gcatccgcgc tgcgcgactg gctggcgcag gccgagaccc agccggctgc
     4021 cgcgctgccc acggcggcca ccacgcgggc attggcactg gaacgcctcg gcgccaactt
     4081 cgacgcgcaa cacggcggca gcgccggcgc tccgaaattc ccgcgggcaa ccgagctgga
     4141 atggctgctc gacgtccccg cggatgcggc ccgcgcgatg gcccgcacca ccttgcggta
     4201 aatggcccgg cgcggcctgc aggatcacct cggcggcggc tttttccgct actgcgtgga
     4261 tgccgactgg acgatcccgc acttcgagaa aatgctgtac gacaacgcgc agctcctgcc
     4321 ggtgtatgca cgcgcggccg ctgatccggc attcgatgcc gggacgcgcg cgcttgcgca
     4381 gcgggccgcg agcggcatcg tcgactggct ggagcgcgac atgctgcgcg ccgacggcgg
     4441 cttcgccagc tcgatggacg ccgacagcga gcacgaggaa ggcaagttct acctgtggac
     4501 gcgcgagtcg atggccactg cgctggatac gcggcttgcc gggctcgcgt tgcgcgcgta
     4561 cggcctcgat cgcgcgccga atttcgaggg ccgcgcctgg cacctggtgc gcgacgagcc
     4621 cgtggaggcg ctggcggcaa gcatgcaacg tggccccaac gaggtcgagc aggacctcga
     4681 aaccgcgcgc gaggcgctgc ttgccgcacg cacccagcgc acgccgccgg gccgcgacga
     4741 caaggcgctc accgcgtgga atgcgctggc gatcgccggc ctggcgcgca gcgcgctcgt
     4801 gctggacgac gcgggttgcg cggcgcttgc gcagcgcgcg ctggacagcc tgcgccgcgg
     4861 cgcctggctg gacggcaagc tgtacgcgaa catcgcgccg ccggccgcgc gcatccccgg
     4921 tttcctcgac gaccacgcct tcctgctcga cgccctgctc gacatgctgc aatggcgctt
     4981 cgatccgggt gacctcgctt gggcggtggc gctggccgac gccctgctcg aacgcttcag
     5041 cgataccgcc agcggcgcgt tctggtttgc cgcggcggat cacgccacgc cgctcgcgcg
     5101 cggccgcagc ttcaccgacg atgcgttgcc caacggcaac gccgtggcca tccgcgcgct
     5161 gctgcgcctt gggcacctgc tcggtgaaac gcgctacctc gatgccgccg aacgcgcctt
     5221 gcaagccggc gcgagcacgc tggtccaact gcccgccgcc tgccccacct tgctgcgtgc
     5281 gcaagccgaa gcggcgcagc cacgcctgca actcgtcgtg cgctgcacgc cggcgcaggc
     5341 ggcgacctgg cgcatggcga tgcgcggagc gctggcgcaa aaccgcctgc cgctgggcaa
     5401 cgacgccatc gacgtgttcg tgatcgacat gcctgctgat gcgttgcccg gcgtgcttgg
     5461 tgcgcgcacg gtggcgacgc cgcatggcag cgcgcagatc tgcactggac tgacgtgcca
     5521 ggcgccgctc accgagccgg ctgatctcgt ggcagcagtg cgcgaagtgc acgcgccgca
     5581 ggtgtcgtgg gccggggttc agcccgacaa cgcccccatc aaaccgccgg gatgaatccc
     5641 gacctgcaac gcacccaccc tcaaccttcg cggaaaaacg cctgcacatc caccaaatcg
     5701 cgcgtgcgcg gcatcggcgg caggctggcg aggaacagct tgccgtagcc cttggtggtg
     5761 aggcgcgggt cgccgagcac cagcacgccg cggtcggtga tgctgcggat caggcgcccg
     5821 gcaccctgct tgagcgcgat cgcggcggcc ggcacctgcc agcccatgaa cgggttgatg
     5881 ccttgctcct ccagggcttc gaggcgggcg accagtaccg ggtcgtcggg cgcggcgaat
     5941 ggcagcttgt cgatcaccac cacgctgagc gcctcgccga cgacgtcgac gccctcccag
     6001 aagctcgcgg cgccgagcag cacgccatgg ccgctgcggc ggaactcctc cagcagctgg
     6061 tggcgcggcg cccggccctg cacgaacagc ggccacggca ccttgtcctg cagcagctcg
     6121 gcggcgcggc gcagtgcgcg gtgcgaggtg aacagcagga aggcacggcc gttggaggcc
     6181 tgcagcaccg gcagcaccgc ctcgatcacc tgctcggtgt a
//
LOCUS       DASSVL010000246         3673 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_132718, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000246 DASSVL010000000
VERSION     DASSVL010000246.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3673)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3673)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3673
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_132718"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            156..1523
                     /gene="pmbA"
                     /locus_tag="VFM52_04225"
     CDS             156..1523
                     /gene="pmbA"
                     /locus_tag="VFM52_04225"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014161064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloprotease PmbA"
                     /protein_id="HET8764406.1"
                     /translation="MTELVHRDDPSAAELDRLAALAEDVIRRARAAGASAAEVAASID
                     TGLNVNVRLGEVETVEHTRDRGFGLTVYFGRRKGSASTADLNPASLQATIDQACAIAR
                     FTEEDACAGLADAARMATDFPDLDLWHPWGIDTDGAIALGKEIEAAGCGYAGITQSDG
                     ASVQAGASLSVYANSHGFLGRERGTEHSISLSLIAGTGDGMQRDYWYDGARDAAAFMS
                     AQALGAKAAERTLARLGARGLGTRACPVLFVPEVARGLVGHLVGAASGGSLYRHASFL
                     VDHAGKPVMPGWLDIVERPRLPRGHGSANFDAEGVATIDSALIERGVLARYVLGSYSA
                     RKLGLASTANAGGIHNLVVAPGADDGETSDFAGMLRRLGTGLLVTEVMGQGVSLVTGD
                     YSRGAAGFWVENGAIAYPVEGITIAANLREMFAGIRAAGTDVDPRSSILCGSLLVERM
                     TVAGD"
     gene            1586..1951
                     /locus_tag="VFM52_04230"
     CDS             1586..1951
                     /locus_tag="VFM52_04230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014161063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4870 domain-containing protein"
                     /protein_id="HET8764407.1"
                     /translation="MSMPPEQMPDSPEISRDDRNIATLTHLSGFLFSILVPLIVWLVH
                     KDRADKGYLVREAKVALNFQLTVLIGYVVCWVLTFIVIGVLLGWLLWLANLVICIIAA
                     TRVSAEGSYHYPFTLDLVN"
     gene            complement(1980..2876)
                     /locus_tag="VFM52_04235"
     CDS             complement(1980..2876)
                     /locus_tag="VFM52_04235"
                     /EC_number="2.5.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011037730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004337 - geranyltranstransferase activity
                     [Evidence IEA];
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="farnesyl diphosphate synthase"
                     /protein_id="HET8764408.1"
                     /translation="MTPTAPHSAAFEALIRRTERALDAALPRADAAPTELRRAMRYAV
                     LGGGKRLRPLLVYAAAHALGHDSPALDAAACAVELIHAYSLVHDDLPAMDDDALRRGR
                     PTCHVAFGEAMAVLAGDALQALAFELLTDPSTVPNAAIGMRMLHALGCACGAEGMAGG
                     QALDLAAVGQRLSLAELEHMHACKTGALIRAAVRLGALAASADDAMLARLDRYAGAVG
                     LAFQVRDDILDVEGASTELGKTAGKDAAAHKPTFPSILGMAASRARLAELVDTAREAI
                     APLGARAALLAELADYAVHRTH"
     gene            complement(2891..3190)
                     /locus_tag="VFM52_04240"
     CDS             complement(2891..3190)
                     /locus_tag="VFM52_04240"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017461828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009318 - exodeoxyribonuclease VII
                     complex [Evidence IEA];
                     GO_function: GO:0008855 - exodeoxyribonuclease VII
                     activity [Evidence IEA];
                     GO_process: GO:0006308 - DNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII small subunit"
                     /protein_id="HET8764409.1"
                     /translation="MAKTAAPTAKTPPATDFEHSLDELEQLVAKMEEGGLNLDESLTS
                     FERGIGLYRNCQQALEKAELRVRLLLDPEAPESAQPFGKPAAGAAPSTADDDLPF"
     gene            complement(3267..>3673)
                     /gene="tilS"
                     /locus_tag="VFM52_04245"
     CDS             complement(3267..>3673)
                     /gene="tilS"
                     /locus_tag="VFM52_04245"
                     /EC_number="6.3.4.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007079953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016879 - ligase activity, forming
                     carbon-nitrogen bonds [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="tRNA lysidine(34) synthetase TilS"
                     /protein_id="HET8764410.1"
                     /translation="SIRWADTELHIWKGRLWAHRRVPPFDPQWQAPWHGEPLTLPDGG
                     MLALTDPGARLHSPLTVRLRRGGERIKPDGDAHTRELRDLFQQAALPPWQRPACPLIC
                     EGGTLIAVADRWLSARAAAVFRAAGSWPRWTP"
BASE COUNT          517 a         1198 c         1373 g          585 t
ORIGIN      
        1 gctggctgcg ggtcgggcct tcgtcgtggt cggtttcgtc ggtgtcggtg tggttcacgg
       61 cgtgtccggt ggcggcgggt ggtagccttg cgcaccccat gcgatgtcgc ggtgcgcgcg
      121 cgcattttac cggtttgccc agcgggagcg cgttcgtgac cgagcttgtc catcgtgatg
      181 accccagcgc cgcggagctg gatcggctcg ccgcgctggc cgaggacgtg atccgccgtg
      241 cccgtgcggc cggtgccagt gccgccgagg tggcggccag catcgacacc gggctcaacg
      301 tgaacgtgcg cctgggcgag gtggaaaccg tcgagcacac ccgtgaccgc ggtttcggcc
      361 tgaccgtgta tttcggccgg cgcaagggtt cggcaagcac cgccgacctc aacccggcat
      421 cgctgcaggc aaccatcgac caggcgtgcg cgatcgcgcg gttcaccgag gaagatgcct
      481 gcgccgggct tgcggacgcc gcgcgcatgg ccacggattt ccccgacctc gacctgtggc
      541 atccgtgggg tatcgacacc gatggcgcga ttgcgctcgg caaggagatc gaggccgcgg
      601 gctgcgggta cgccggcatc acccaatccg atggcgccag cgtgcaggcg ggcgccagcc
      661 tttcggtgta tgcgaactcg cacggtttcc tcggccgcga gcgcggcacc gagcattcga
      721 tttcgttgtc gctgatcgcc ggcaccggcg acggcatgca gcgcgattac tggtacgacg
      781 gcgcgcggga tgcggcggcc ttcatgagcg cgcaggcatt gggcgcgaag gccgccgagc
      841 gcacgctggc gcggctgggc gcgcgcgggc tcggcacccg cgcctgcccg gtgctgtttg
      901 tgccggaagt cgcgcgcggg ttggtcggcc acctggtggg cgcggccagc ggcggttcgc
      961 tgtaccggca cgcgagcttt ctcgtcgacc acgccggcaa gccggtgatg ccaggctggc
     1021 tcgacatcgt cgaacgcccg cgcctgccgc gcgggcatgg ttcggcgaat ttcgacgccg
     1081 aaggcgtggc cacgatcgac agcgcgctga tcgaacgcgg cgtgctggcg cgctacgtgc
     1141 tgggcagcta ttccgcgcgc aagcttgggc tggcatcgac ggcgaatgcc ggcggcatcc
     1201 acaacctcgt ggtggcgccg ggcgccgatg atggcgagac gtcggatttc gccggcatgc
     1261 tgcggcgcct gggtaccggc ctgctggtga ccgaagtgat ggggcagggc gtgagcctgg
     1321 tcaccggcga ttactcgcgc ggcgcagccg ggttctgggt cgaaaatggt gccatcgcgt
     1381 acccggtcga gggcatcacc attgccgcca acctgcgtga gatgtttgcg ggcatccggg
     1441 cggccggtac cgacgtcgat ccccgctcat ccatcctgtg cggctcgctg ctggtcgagc
     1501 gcatgacggt ggcgggcgac tagccacagg cgcatgctgt gcgcacgacg ttcacctgct
     1561 tgccacccag ccgggagaag tgccgatgag catgccgcca gaacagatgc cggattcacc
     1621 ggaaatcagc cgcgacgatc gcaacatcgc gacgttgacg cacctgtcgg gtttcctgtt
     1681 ttcgatcctc gtgccgctca tcgtgtggct ggtgcacaag gaccgcgccg acaagggtta
     1741 cctcgtgcgc gaagccaagg tggcgctgaa cttccagctc accgtgctga tcggttacgt
     1801 cgtgtgctgg gtgctcacct tcatcgtgat cggcgtgctg ctcggctggc tgttgtggct
     1861 ggccaacctg gtcatctgca tcattgcggc aaccagggtc agcgcggaag gcagctacca
     1921 ctacccgttc acgctcgacc tggtgaattg agccgcgcgt ctggcgctga ccgccgcatt
     1981 cagtgcgtgc ggtgcaccgc gtagtcggcg agttccgcca gcagtgcggc gcgcgcgccc
     2041 agcggcgcga tggcttcacg ggcggtgtcg accagctcgg caaggcgcgc gcgcgaggcc
     2101 gccatgccga ggatcgaggg gaacgtgggc ttgtgcgcgg cggcgtcctt gccggcggtc
     2161 ttgcccagct cggtggacgc gccttcgacg tcgaggatgt cgtcgcggac ctggaaggcg
     2221 aggccgaccg cgccggcata gcggtcgaga cgggcgagca tggcgtcatc ggcgctggcc
     2281 gccagcgcgc caaggcgcac cgcggcgcgg atcagcgcgc cggtcttgca ggcgtgcatg
     2341 tgttcgagtt cggccagtga caggcgctgg ccgacggcgg cgaggtcgag cgcctggcca
     2401 ccggccatgc cttcggcgcc gcatgcgcag cccagcgcgt gcagcatgcg catgccgatc
     2461 gcggcattcg gcacagtgga aggatcggtc agcaactcga acgcgagcgc ctgcagggcg
     2521 tcgccggcga gcacggccat cgcctcgcca aaggcgacgt ggcaggtcgg ccggccacga
     2581 cgcagggcgt cgtcgtccat ggccggcagg tcgtcgtgca ccagcgagta cgcatggatc
     2641 agttccaccg cgcaggcggc ggcgtccagg gcgggggagt cgtggccgag cgcatgcgcg
     2701 gccgcgtaca ccagcagcgg ccgcagacgc ttgccgccgc caagcacggc gtagcgcatg
     2761 gcgcggcgga gttcggtagg cgctgcatcg gcgcgcggca gcgcggcatc gagggcgcgt
     2821 tcagtgcggc ggatcagcgc ctcgaacgcg gcgctgtggg gagcggtcgg agtcaacggg
     2881 gcaacggata tcagaacggg aggtcgtcgt ccgcggtgga cggggccgcc cctgcggccg
     2941 gcttgccgaa cggctgcgcg gattccggcg cttcggggtc gagcagcagg cgcacgcgca
     3001 gctcggcttt ttccagcgcc tgctggcaat tgcgatacag gccgatgccg cgctcgaacg
     3061 aagtcagcga ctcgtcgagg ttcaggccac cttcctccat cttcgccacc agctgttcga
     3121 gctcgtcgag cgagtgctcg aagtcggtgg cgggcggtgt cttggcagtg ggggcggcgg
     3181 tcttggccat ggctcgcaac gctagcgcag cgcatgggtg gaatcaatcc ggcgtgcgct
     3241 tccgggctct tgcgagcggc cgggattcac ggcgtccagc gcggccagct gccggcggcg
     3301 cggaaaaccg cggcggcgcg tgcgctgagc cagcgatccg caaccgcaat caacgtgccg
     3361 ccttcgcaga tcagcgggca ggccggacgc tgccagggtg gcagggcggc ttgctggaac
     3421 aggtcgcgca gttcgcgggt gtgggcatcg ccatcgggct tgatgcgttc gccgccgcgg
     3481 cgcagacgca ccgtgagagg gctatgcagc cgcgcaccgg ggtcggtcag tgcgagcatg
     3541 ccgccgtccg gcagcgtgag cggctcgccg tgccagggcg cctgccattg gggatcgaag
     3601 ggcggcacgc gacggtgtgc ccacagccgg cctttccaga tgtgcagctc ggtatccgcc
     3661 cagcggatcg acg
//
LOCUS       DASSVL010000247         2005 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1305057,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000247 DASSVL010000000
VERSION     DASSVL010000247.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2005)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2005)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2005
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1305057"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..215)
                     /locus_tag="VFM52_04250"
     CDS             complement(<1..215)
                     /locus_tag="VFM52_04250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007082553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8764411.1"
                     /translation="MRGWHRLALAGALSLLAAAPAAANPDDAAPAADTARAQALTGFQ
                     HDLVSVLALRATPAPLLGAALLARPLA"
     gene            391..585
                     /locus_tag="VFM52_04255"
     CDS             391..585
                     /locus_tag="VFM52_04255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007514414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antitermination protein NusB"
                     /protein_id="HET8764412.1"
                     /translation="MNPFPSFADGAPWFAGWGTLALINAGLAQGKHRSGLVWFLLSLP
                     FGPLATLALVLLPTVRSKLF"
     gene            complement(659..1513)
                     /gene="speE"
                     /locus_tag="VFM52_04260"
     CDS             complement(659..1513)
                     /gene="speE"
                     /locus_tag="VFM52_04260"
                     /EC_number="2.5.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019466540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyamine aminopropyltransferase"
                     /protein_id="HET8764413.1"
                     /translation="MSQQPSWFTEAHQPSGSSIGFRTEALLHSEKTPYQTIEIHQTTD
                     WGKLMVIDGCVMLTSRDNFLYHEMMTHPALFTHARAKRVVIIGGGDCGTLHEVLKHEE
                     VEHVAQVEIDERVTRLAEEYFPELCESNADPRAELLFIDGIKYMAEAEPESIDLVIVD
                     STDPVGPAEGLFNAAFYTSCHKALRHGGILVQQSESPLAHLELIKSMRASMRTAGFAA
                     VKTLPFPQPCYPTGWWSCTMARKGGELSGFRERGALSKSFRTKYYNAEIHKAALATPE
                     FMREELGE"
     gene            1709..>2005
                     /locus_tag="VFM52_04265"
     CDS             1709..>2005
                     /locus_tag="VFM52_04265"
                     /EC_number="4.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015449141.1"
                     /note="catalyzes the formation of agmatine from arginine
                     in putrescine and spermidine biosynthesis; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine decarboxylase"
                     /protein_id="HET8764414.1"
                     /translation="MSKPWSVAAARHVYAVPHWGDGYVDVDAAGDIVLRPRGEHGPAL
                     ALPAIVERARGEGLRLPLLVRFPDILADRLARLQAAFAQAIGEADYAGHYTAIYP"
BASE COUNT          270 a          655 c          740 g          340 t
ORIGIN      
        1 ttcgccagcg gccgcgccag cagcgccgca ccgagcagcg gcgccggtgt ggcgcgcagc
       61 gcgagcacgc tgacgagatc gtgctggaaa ccggtgagcg cctgcgcgcg ggcggtgtcg
      121 gcggcgggcg ccgcgtcatc cgggttggcg gccgccgggg cggcggcgag cagcgacagg
      181 gcgccggcaa gggcgaggcg atgccatcca cgcatggggt gctccagcga tcatgaagcc
      241 gccagcttag tggccgggga ttgaggacgc tctgaatggt ggatgaggca aggggcgtcg
      301 tggcagctcc gccccgaggt gggttgttag gatgcaggtt cgtcctgcgc gcccggcgcg
      361 ctccaccaca caggggctgg aggctatgcc gtgaatccat ttcccagttt cgccgacggc
      421 gcgccgtggt ttgccggctg gggcacgctg gcgctgatca atgcgggcct ggcgcagggc
      481 aagcaccgca gcggcctggt ctggttcctg ctgtcgctgc cgttcggccc gctggcgacg
      541 ctggcgctgg tgctgctgcc gacggtgcgc agcaagttgt tctgagggcc cggaccgggg
      601 attcgaagga ggcgcggtgt cgcgggacgc ggcagtgccg catccccgat tccggcccct
      661 actcccccaa ttcctcgcgc atgaactccg gcgttgccaa cgcggccttg tggatctcgg
      721 cgttgtagta cttcgtgcgg aagctcttgc tgagcgcgcc gcgctcgcgg aagccggaca
      781 gctcgccgcc cttgcgcgcc atggtgcagc tccaccagcc ggtggggtag cacggttgcg
      841 ggaacggcag cgtcttcacc gcggcgaacc cggcggtgcg catcgaggcg cgcatcgact
      901 tgatgagctc gaggtgcgcc agcggcgatt ccgattgctg cacgaggatg ccgccgtggc
      961 gcagcgcctt gtggcagctg gtgtagaacg ccgcgttgaa cagcccctcg gcggggccga
     1021 ccggatcggt cgagtcgacg atgacgaggt cgatcgattc cggctcggcc tcggccatgt
     1081 acttgatgcc gtcgatgaac agcagctcgg cgcgcgggtc ggcgttcgac tcgcacagct
     1141 cggggaaata ctcctcggcg aggcgcgtca cgcgctcgtc gatctcgacc tgggcgacgt
     1201 gctcgacttc ctcgtgcttg agcacctcgt gcagcgtgcc gcagtcgccg ccgccgatga
     1261 tcaccacgcg cttggcgcgc gcgtgggtga acagcgccgg gtgggtcatc atctcgtggt
     1321 agaggaaatt gtcgcggctg gtcagcatca cgcagccgtc gatcaccatc agcttgcccc
     1381 agtcggtggt ctggtggatc tcgatggtct ggtacggcgt cttctcgctg tgcagcaggg
     1441 cctcggtgcg aaagccgatg gaagagccgg agggctggtg cgcttcggtg aaccagctgg
     1501 gttgctgcga catggtcgat gctcgaagtg gcgacgcgga atggcccgcc attgtatccg
     1561 gtcgctggcg accgcggctc ggcccgctac aatggacgcc tgcgcgaacg gccccgcggc
     1621 gtgcgaggct tccggccgct ggcgcgatca ccacgtcaag gctcgccgct gcgacgacat
     1681 gttcttccgt tggtacgagg agctctccat gtcgaagccc tggagcgtgg ccgctgcgcg
     1741 ccacgtgtat gccgtgcccc actggggcga tggctacgtt gatgtcgatg ctgccggcga
     1801 catcgtgctg cgcccgcgcg gcgagcacgg gccggcgctg gcgctgccgg cgatcgtcga
     1861 gcgcgcgcgc ggcgaaggcc tgcgcctgcc gctcctggtg cgctttcccg acatcctggc
     1921 cgaccgcctg gcgcgcctgc aggcggcgtt tgcgcaggcc attggcgagg cggattacgc
     1981 cggccactac accgcgatct acccg
//
LOCUS       DASSVL010000248         6976 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_245818, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000248 DASSVL010000000
VERSION     DASSVL010000248.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 6976)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6976)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6976
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_245818"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2669
                     /locus_tag="VFM52_04270"
     CDS             <1..2669
                     /locus_tag="VFM52_04270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008438856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="NahK/ErcS family hybrid sensor histidine
                     kinase/response regulator"
                     /protein_id="HET8764415.1"
                     /translation="YMLLVSVAVLPIVAAGAQLPIVRDGLADAWVLNLPLALDNHGMT
                     LLAFLGGFSAATGMVIVAAVALSTMISNDLVMPALLRLRHLQLDRRSDLSALVLRVRR
                     IAIVALVAMAYGYYRSVADAENLAATGLLVFVAVAQLAPAIIAALYWRGASRYGVAAG
                     MIAGFAVWLYTLLLPAVLHVGSWQQEGPLGLAWLKPQDLFQLGSNAAPLLHGTLWSLA
                     ANVGCLVFVSLRWRPSLEDRLHAALFVHPYAAKRGGAGDWRGRVVVADLRTIATRIVG
                     KRGTERAFANYERRRGKPLQPGESADRALIQHTERLLAGAVGAASARRILMGGLSGSG
                     LDIAEAMALMDEASQELRFNRELLSSTLENVSQGISVVDAQMHVVAWNRRYLELFGYP
                     DGMVYVGVPVAELIRWNAEHGECGPGEVDGHVQKRLAHLRAGTPHVFERVRADGSTIE
                     MRGRALPGGGYVTTYTDITAYKRAEQALIEANETLEQRVEKRTAELSEALVATAQARR
                     VAEAANVSKTRFLAAASHDLLQPLNAARLFTSALRQQPQLDADSRQLAERIDAAFRAA
                     EDLLDALLDTSRLDVGSYHPEPASFALSEMFDSLHTQFAVLAEQRGLRRTVVPTKLAV
                     RSDPQLLRRVLQNFLSNAFRYTERGGVLLGARRSGDAVRIEVWDTGPGIAADQQARIF
                     GEFQRLDRPSPWGEKGLGLGLSICDRIAAMLGHRLDLHSRPDHGSCFAVTVPRAAAAP
                     ARRQVVRRAGSDEQLPLTVLCLDDDVAILDGMRALLSRWGVDCRTASDVATAAQELKR
                     GAVDLILADYHLADDTDGLHALQALRKVRDPLPPTALITADGSTELKQRARALGYPLL
                     HKPVRPAALRALLSALARQQGAVPRAAGGQRM"
     gene            complement(2657..3997)
                     /gene="hslU"
                     /locus_tag="VFM52_04275"
     CDS             complement(2657..3997)
                     /gene="hslU"
                     /locus_tag="VFM52_04275"
                     /EC_number="3.4.25.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007082407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent protease ATPase subunit HslU"
                     /protein_id="HET8764416.1"
                     /translation="MSELTPREIVNELDRYIIGQHGAKRAVAVALRNRWRRMQLAPEM
                     RDEVTPKNILMIGPTGVGKTEIARRLATLANAPFVKVEATKFTEVGYVGKDVESIVRD
                     LADVAYKLTRAQAVTRVRSQAGDRAEDRILDALLPRRQAPADWSHDAPAAPAIDTDTR
                     QKLRKQLREGKLDDREIELDFAMNVGVEIMSPPGMEEMGAQLRQMFQNLGGAKTQSRK
                     LAIKAARPLLIDEEAGKLLNDEEVRAQAMEAAEQNGIVFIDEIDKVAQRSDYGHSGVS
                     REGVQRDLLPLIEGSTVATKYGPIKTDHMLFIASGAFSLAKPSDLIPELQGRLPIRVE
                     LSALSVDDFKRILREPHNALTKQYAALLSTEGVTLEFTDDGVDRLAEVAFQVNERTEN
                     IGARRLHTVMERLLEQISYEAADKNGETYRIDAAQVDRSLGNLSRDEDLSRYIL"
     gene            complement(4074..4628)
                     /gene="hslV"
                     /locus_tag="VFM52_04280"
     CDS             complement(4074..4628)
                     /gene="hslV"
                     /locus_tag="VFM52_04280"
                     /EC_number="3.4.25.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007510016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004298 - threonine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0051603 - proteolysis involved in protein
                     catabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent protease subunit HslV"
                     /protein_id="HET8764417.1"
                     /translation="MESFHATTILSVRRGDKVVIGGDGQVTLGNIVAKSNARKIRRLG
                     KDGAVLAGFAGATADAFTLFELFEQKLDKHGNNLTRAAVEMAKEWRTDRRLGRLEAML
                     AVADRDASLLISGNGDVLEPEHGLIAIGSGGPYAQSAALALMENTDLGARAIVERALK
                     IAGDICIYTNHSTTIEELDLGDGK"
     gene            complement(4715..5593)
                     /locus_tag="VFM52_04285"
     CDS             complement(4715..5593)
                     /locus_tag="VFM52_04285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008438918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0009037 - tyrosine-based site-specific
                     recombinase activity [Evidence IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA];
                     GO_process: GO:0007049 - cell cycle [Evidence IEA];
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine recombinase XerC"
                     /protein_id="HET8764418.1"
                     /translation="MATWLGHLAGERQASPNTIAAYRRDLAKLLAWMTAQGVADFAAL
                     EPNHMHQFVATEHRGGLAPKSLQRLLSSCRSLFHALQREGALRHDPLAGVRGPKVHRT
                     LPVVLDVDEAASLMDSGGEGALGVRDRAMLELFYSSGLRLSELVGLRWSDLDLDGGEV
                     RVLGKGRKTRIVPVGRYAVTSLRALGASEGSAAEAPVFRGRHGAAISPRTVQARLDKL
                     ALEHGFAKHVHPHLLRHTFASHLLESSGDLRAVQELLGHADIATTEIYTHLDFQHLAK
                     VYDAAHPRAKRKPGES"
     gene            complement(5613..6314)
                     /locus_tag="VFM52_04290"
     CDS             complement(5613..6314)
                     /locus_tag="VFM52_04290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019464768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF484 family protein"
                     /protein_id="HET8764419.1"
                     /translation="MNVPLSEAADAATSVDAATVAAYLRAHPDFLADTPELAAHLTLP
                     RAQGGVASFGSYRVQQLRERNAELERRLAELVAIAADNEKLMERVHTLTVALLRANTL
                     EVVTRTVMARLSADFHSERVRLLLFGHNPELPRSDWLCQVGGGASELPELADLLRRAE
                     PTSGRLGADKLACLFGAEAADIHSAAVLPLGDSGVLAIGSHDEHRFQPGMGTLFLKMI
                     AATVTAALARARDLA"
     gene            complement(6378..>6976)
                     /gene="dapF"
                     /locus_tag="VFM52_04295"
     CDS             complement(6378..>6976)
                     /gene="dapF"
                     /locus_tag="VFM52_04295"
                     /EC_number="5.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007082403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008837 - diaminopimelate epimerase
                     activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="diaminopimelate epimerase"
                     /protein_id="HET8764420.1"
                     /translation="CVAAWLHRAGALPIDHEVRLESPSGPVTVRLLAADQVTVDMGEP
                     VFDPARIPFAAAAAADRYALDVAGTRLDIGAVSMGNPHAVVMAASLPPEAIEQLGPAL
                     TAHPRFPAGANAGFVERHDRSHLGLRVHERGAGWTLACGTGACAAVAVLRRRDEVDAR
                     VRVDLPGGGLDIAWDGPGQPLWMTGPAAFAFEGQWLAH"
BASE COUNT          929 a         2385 c         2583 g         1079 t
ORIGIN      
        1 tgtacatgct gctggtgagc gtggcagtgc tgccgatcgt cgctgccggc gcgcagctgc
       61 cgatcgtgcg cgacgggctg gccgacgcct gggtgcttaa cctgccgctc gcgctggaca
      121 accacggcat gacgctgctc gcgttcctcg gcggcttctc ggcggcgacc ggcatggtga
      181 tcgtcgctgc ggtcgcgctg tcgacgatga tcagcaacga cttggtgatg ccggcgctgc
      241 tgcgcctgcg ccacctgcag ctggatcgcc gcagcgacct gtccgccctg gtgctgcgtg
      301 tgcgccgcat cgcgatcgtg gcgctggtgg cgatggcgta cggttattac cgctcggtgg
      361 cggatgccga gaacctcgcg gcaaccggcc tgctcgtctt cgtcgccgtc gcccagctcg
      421 cgccggcgat catcgccgcg ctgtactggc gcggggcgag ccggtacggg gtcgccgccg
      481 gcatgatcgc cggcttcgcg gtgtggctgt acacgctgct gctgccggcg gtgctgcacg
      541 tcggcagctg gcagcaggag ggcccgctcg ggctggcgtg gctgaagccg caggacctgt
      601 tccagctcgg cagcaatgcg gcaccgctgc tgcacggcac cttgtggtcg ctggccgcga
      661 atgtcggctg cctggtgttc gtgtcgctgc gctggcggcc gagcctcgag gatcgcctgc
      721 acgcggcgct gttcgtgcac ccgtatgcgg ccaagcgcgg cggcgccggc gactggcgcg
      781 ggcgcgtggt ggtggccgac ctgcgcacca tcgccacccg catcgtcggc aagcgcggaa
      841 ccgagcgcgc gtttgcgaat tacgagcgcc ggcgcggcaa gccgctgcag ccgggcgagt
      901 cggccgaccg cgcgctgatc cagcacaccg agcgcctgct cgccggcgcg gtgggcgcgg
      961 ccagcgcgcg gcgcatcctg atgggcgggt tgtccggctc cgggctcgac atcgccgagg
     1021 cgatggcgct gatggacgaa gcctcgcagg aactgcgctt caaccgcgag ctgctgtcca
     1081 gcacgctgga aaacgtgtcg cagggcatca gcgtggtcga cgcgcagatg cacgtggtgg
     1141 cgtggaaccg gcgctatctc gaactcttcg gctaccccga cggcatggtc tacgtcggcg
     1201 tgccggtggc cgagctgatc cgctggaatg ccgagcacgg cgagtgcggg ccgggcgaag
     1261 tcgacggcca cgtgcagaag cgcctcgcgc acctgcgcgc cggcacgccg cacgtgttcg
     1321 agcgcgtgcg cgccgatggc tcgacgatcg agatgcgcgg ccgtgcgctg cccggtggcg
     1381 gttacgtcac cacctacacc gacatcaccg cgtacaagcg cgccgagcag gccctgatcg
     1441 aggcgaacga gacgctggag cagcgcgtcg agaagcgcac ggcggagttg tccgaggcgc
     1501 tggtggctac tgcccaggcg cggcgcgtcg ccgaggcggc gaacgtgtcg aagacgcgct
     1561 ttctcgccgc cgcgagccac gacctgctgc agccgctcaa cgccgcacgg ctgttcacct
     1621 cggcgctgcg ccagcagccg caactcgatg ccgattcgcg ccagcttgcc gagcgtatcg
     1681 atgccgcgtt ccgcgccgcg gaggacctgc tcgatgcgct gctcgacacc tcgcgcctcg
     1741 acgtcggcag ttatcacccg gagccggcga gtttcgcgct gagcgaaatg ttcgattcgc
     1801 tgcacaccca atttgccgtg ctcgccgagc agcgcgggct gcgccggacc gtggtgccga
     1861 ccaagctcgc ggtgcgcagc gacccgcagt tgctgcgccg cgtgctgcag aacttcctgt
     1921 ccaacgcgtt ccgctacacc gagcgtggcg gcgtgctgct cggggcgcgg cgcagtggcg
     1981 acgcggtgcg catcgaggtg tgggataccg ggccgggcat cgccgccgac cagcaggcgc
     2041 gcatcttcgg cgaattccag cggctcgacc ggccgtcacc gtggggcgag aaggggctgg
     2101 gcctgggcct gtcgatctgc gaccgcatcg cggcaatgct cggccaccgg ctcgacctgc
     2161 actcgcgccc cgaccatggc agctgctttg cggtgaccgt gccgcgcgcg gcggccgcgc
     2221 cggcgcggcg ccaggtggtg cgccgcgccg gcagcgacga gcagttgccg ctgaccgtgc
     2281 tgtgcctgga cgacgacgtc gcgatcctcg atggcatgcg cgcgctgctc agccgctggg
     2341 gcgtggattg ccgcaccgcc agcgacgtgg ccaccgcggc gcaggagctg aaacgcgggg
     2401 cggtcgacct gatcctcgcc gactaccacc tcgccgacga caccgacggc ctgcacgcgc
     2461 tgcaggcgtt gcgcaaggtg cgcgacccgt tgccaccgac cgcgctgatc accgccgacg
     2521 gcagcaccga actcaagcag cgcgcgcgcg cgctgggcta tccgctgctg cacaagccgg
     2581 tgcgcccggc ggcgctgcgc gcgctgttgt cggcgctggc acgccagcag ggcgcggtgc
     2641 cgcgggcagc cggcggtcag aggatgtagc ggctcagatc ctcgtcgcgg ctgaggttgc
     2701 cgaggctccg gtcgacctgc gccgcgtcga tgcggtaggt ctcgccgttc ttgtcggcgg
     2761 cctcgtagga gatctgctca agcaggcgtt ccatcaccgt gtgcagccgg cgcgcgccga
     2821 tgttctcggt gcgctcgttg acctggaagg cgacctcggc gaggcggtcg acgccgtcgt
     2881 cggtgaattc cagggtcacg ccctcggtcg acagcagggc cgcgtactgc ttggtcagtg
     2941 cgttgtgcgg ctcgcgcagg atgcgcttga agtcgtcgac cgacagcgcg gagagctcca
     3001 cgcggatcgg caaccggccc tgcagctcgg gaatcaggtc cgacggcttc gccagcgaga
     3061 acgcgccgga ggcgatgaac agcatgtggt cggtcttgat cgggccgtat ttggtggcca
     3121 ccgtcgagcc ttcgatcagc ggcagcaagt cgcgctgcac gccctcgcgc gacacgccgg
     3181 aatgaccgta gtcgctgcgc tgcgcgacct tgtcgatctc gtcgatgaac acgatgccgt
     3241 tctgctcggc ggcttccatc gcctgtgcgc gcacctcctc gtcgttcagg agcttgcccg
     3301 cctcctcgtc gatcagcagc ggccgcgcgg ccttgatcgc cagcttgcgg ctctgcgtct
     3361 tcgcgccgcc gaggttctgg aacatctggc gcagctgcgc gcccatctcc tccatgcccg
     3421 gcggcgacat gatctcgacg cccacgttca tcgcgaaatc gagctcgatc tcgcgatcgt
     3481 ccagcttgcc ctcgcgcagc tgcttgcgca gcttctggcg ggtgtcggtg tcgatcgccg
     3541 gtgcggccgg cgcgtcgtgg ctccagtcgg ccggcgcctg gcgacgcggc agcagggcat
     3601 ccaggatacg gtcctcggcg cggtccccgg cctgcgagcg cacgcgggtc accgcctgcg
     3661 cgcgggtcag cttgtaggcg acgtcggcga ggtcgcgcac gatcgattcg acgtccttgc
     3721 cgacgtagcc gacctcggtg aacttggtcg cttccacctt gacgaacggc gcgttggcca
     3781 gcgtcgccag gcggcgcgcg atctcggtct tgccgacgcc ggtcgggccg atcatcagga
     3841 tgttcttcgg cgtcacctcg tcgcgcattt ccggcgccag ctgcatgcgc cgccagcgat
     3901 tgcgcagcgc caccgccacc gcacgcttcg caccgtgctg gccgatgatg tagcgatcga
     3961 gttcgttgac gatttcgcgg ggagtcagtt cagacatggc ggtgccggga atggggatgg
     4021 agtacagcag gtggacagcg tggggcggtg ggcggggcgg cggtgccgat gccctatttc
     4081 ccgtcgccga ggtccagctc ttcgatcgtc gtggagtggt tggtgtagat gcagatgtcg
     4141 ccggcgatct tcagcgcgcg ctcgacgatg gcgcgcgcgc cgaggtcggt gttctccatc
     4201 agcgcgagcg cggccgattg cgcatacggg ccgccggagc cgatcgcgat caggccgtgc
     4261 tcgggttcca gcacgtcgcc gttgccggag atcagcagcg aggcgtcgcg gtcggcgacg
     4321 gcaagcatcg cttcgagccg gccgaggcgg cggtcggtac gccattcctt ggccatctcc
     4381 actgccgcgc gggtgaggtt gttgccgtgc ttgtcgagct tctgttcgaa caactcgaac
     4441 agcgtgaacg cgtcggcggt ggcgccggcg aagccggcga gcaccgcgcc gtccttgccg
     4501 aggcggcgga tcttgcgcgc gttcgacttg gcgacaatgt tgcccagcgt gacctgcccg
     4561 tcgccgccga tcacgacctt gtcgccgcgg cgcacgctga gaatggtggt ggcgtggaag
     4621 gattccatgg aagccctgca ggaagcggtc tgagccgatg agatggggcc gcggacggtg
     4681 ggcttcaata caccaccacc cccgcgatgg gcgcctagct ctcgccgggc tttcgcttgg
     4741 cgcgcggatg cgccgcgtcg tacacctttg ccaggtgctg gaaatccagg tgggtataga
     4801 tctcggtggt ggcgatgtcg gcgtggccga ggagttcctg caccgcgcgc aggtcgccgg
     4861 aggattcgag caggtggctg gcgaaggtgt ggcgcagcag gtgcgggtgc acgtgcttgg
     4921 cgaagccgtg ctcgagcgcg agcttgtcca ggcgcgcctg caccgtgcgc gggctgatcg
     4981 ccgcgccgtg gcggccgcgg aacaccggcg cttcggcggc gctgccctcg ctggcgccga
     5041 gcgcgcgcaa cgaggtgacg gcgtagcggc cgaccggcac gatgcgcgtc ttgcggccct
     5101 tgcccagcac acgcacttcg ccgccgtcga ggtcgaggtc gctccagcgc aggccgacca
     5161 gctcggacag gcgcaggccg gaggaataga acagttccag catcgcgcgg tcgcggacgc
     5221 cgagcgcgcc ctcgccgccg ctgtccatca ggctggcggc ctcgtccacg tcgagcacga
     5281 ccggcagcgt gcggtgcacc ttcggcccgc gcacgccggc cagtggatcg tggcgcagcg
     5341 cgccttcgcg ttgcagcgcg tggaacaggc tgcggcacga ggacagcagc cgttgcaggc
     5401 ttttcggcgc gagcccgccg cgatgctcgg tggcgacgaa ctggtgcatg tggttgggtt
     5461 ccagcgcggc gaagtcggcg acgccctggg cggtcatcca cgcgagcagc ttggcgaggt
     5521 cgcggcgata ggcggcgatc gtgttgggcg acgcctggcg ttcgccggcc aggtggccga
     5581 gccaggtcgc cacttgccgg gcgggcaggg aatcaggcga ggtcgcgggc acgggcgagc
     5641 gcggcggtga cggtggccgc gatcattttc aggaacaggg tgcccatgcc gggctggaag
     5701 cggtgctcgt catggctgcc gatcgccagc acgcccgagt cgcccagcgg cagcaccgcg
     5761 gcggagtgga tgtcggcggc ttcggcgccg aacaggcagg ccagcttgtc ggcgccgagg
     5821 cggcccgagg tgggctccgc gcggcgcagc aggtcggcca gttccggcag ttcggacgcc
     5881 ccgccgccaa cctggcacag ccagtcggag cgcggcagct cggggttgtg gccgaacagc
     5941 agcaggcgca cccgctcgct gtggaaatcc gcgctcaggc gggccatcac cgtgcgcgtc
     6001 accacctcga gcgtgttcgc gcgcagcagc gccacggtca gcgtgtggac gcgctccatc
     6061 agcttttcgt tgtcggcggc aatcgccacc agttccgcca gccggcgctc gagctcggcg
     6121 ttgcgctcgc gcaactgctg cacgcggtag ctgccgaacg acgcgacgcc gccctgggcg
     6181 cgcggcagcg tgagatgcgc ggcgagctcg ggggtgtcgg cgagaaaatc gggatgcgcg
     6241 cgcaaatacg cggcgaccgt ggcggcatcg acggacgtgg ccgcgtcggc agcctcagac
     6301 agggggacgt tcatgcgcgt ggttctccgg ccgcgggctt ggtaccggcc cgagtgtgcg
     6361 atggtccggc gcgcggatca atgcgcgagc cactgcccct cgaacgcgaa cgccgccggg
     6421 ccggtcatcc acaatggttg gccgggaccg tcccaggcga tgtcgaggcc gccgccaggc
     6481 aggtcgacgc gcacccgcgc gtccacctcg tcgcggcggc gcaacacggc aaccgcggcg
     6541 caggcgccgg tgccgcaggc cagcgtccag ccggcgccgc gctcgtgcac gcgcaggccg
     6601 aggtggctgc ggtcgtggcg ttcgacgaag ccggcgttgg ccccggcggg gaaccgcggg
     6661 tgcgcggtga gcgccgggcc gagctgttcg atcgcctccg gtggcaggct ggccgccatc
     6721 accaccgcgt gcgggttgcc catggaaacc gcgccgatgt cgagccgggt gccggccacg
     6781 tcgagcgcgt agcggtcggc ggccgcggcg gcggcgaacg ggatgcgcgc gggatcgaac
     6841 accggttcgc ccatgtcgac ggtgacctgg tcggcggcca agaggcgcac ggtgaccgga
     6901 ccggacgggc tttccagccg cacctcgtgg tcgatcggca gcgcgccggc gcggtgcagc
     6961 cacgccgcga cgcagc
//
LOCUS       DASSVL010000249         2101 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_698061, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000249 DASSVL010000000
VERSION     DASSVL010000249.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2101)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2101)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2101
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_698061"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1161)
                     /gene="glnA"
                     /locus_tag="VFM52_04300"
     CDS             complement(<1..1161)
                     /gene="glnA"
                     /locus_tag="VFM52_04300"
                     /EC_number="6.3.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017157345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004356 - glutamine synthetase activity
                     [Evidence IEA];
                     GO_process: GO:0006542 - glutamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I glutamate--ammonia ligase"
                     /protein_id="HET8764421.1"
                     /translation="MTAKDVLDQIVEHDIEFVDFRFADMLGKHHHVTFPAHAIDEGTF
                     EDGKMFDGSSIVGWKGINESDMILMPDPDTAYLDPFSAHPQLVLHCDVLEPSTLQAYG
                     RDPRSIAKRAEAYLKSTGLADSAYFGPEPEFFIFDSVRWQNDMGRVFYEIESQEAAWS
                     TRFKYEDGNMGHRPGVKGGYFPVPPVDSLADLRADMCKVLESLGQTVEVHHHEVANAG
                     QCEIGVKFNTLVSKADELMTMKYVLKNVAQQNGKTVTFMPKPIVGDNGSGMHVHQSLS
                     KNGENLFAGELYGGLSQTALWYIGGIFKHAKAIHAFANSTTNSYKRLVPGFEAPVMLA
                     YSARNRSASCRIPYVASPKGRRIEVRFPDPMQSGYLVFTALMMAGLDGILNKI"
     gene            complement(1463..1765)
                     /locus_tag="VFM52_04305"
     CDS             complement(1463..1765)
                     /locus_tag="VFM52_04305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8764422.1"
                     /translation="MTLRAQCRAVHAAQAEVTLRRAALVTPAAALMTRARERPLTSLG
                     LVAGAGFVLGNLHWPLPHTFTASTLVRDGVLELAALLWRTATAPHADAGAAGPTTE"
     gene            complement(1762..>2101)
                     /locus_tag="VFM52_04310"
     CDS             complement(1762..>2101)
                     /locus_tag="VFM52_04310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007510148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HET8764423.1"
                     /translation="RALLGAHRRLLRAELGLARSAVAWLLLAALVTVALAVAFGLTVL
                     GLLGVLLAGWWHSWPLALAALAAAQLLLLILAIAAFRRCLHWLSLPASRAAWRALQHP
                     SQAAGTEEAP"
BASE COUNT          330 a          677 c          749 g          345 t
ORIGIN      
        1 gatcttgttg aggatgccat ccagcccggc catcatcagc gcggtgaaca ccaggtagcc
       61 ggactgcatc gggtcgggga agcgcacctc gatgcggcga cccttggggc tggccacata
      121 cgggatgcgg cagctcgccg agcggttgcg cgcggagtag gccagcatca ccggcgcctc
      181 gaagcccggc accaggcgct tgtagctgtt ggtggtggag ttggcgaagg cgtggatcgc
      241 cttggcatgc ttgaagatgc cgccgatgta ccacagcgcg gtctggctca ggccgccgta
      301 gagctcgccg gcgaacaggt tctcgccgtt cttgctgagc gactggtgca cgtgcatgcc
      361 gctgccgttg tcgcccacga tgggcttggg catgaaggtg acggtcttgc cgttctgctg
      421 ggcgacgttc ttcagcacgt acttcatcgt catcagctca tcggccttgg aaaccaaggt
      481 gttgaacttg acgccgatct cgcactggcc ggcgttggcc acctcgtggt ggtgcacttc
      541 cacggtctgg cccagcgact ccagcacctt gcacatgtcg gcgcgcaggt cggcgagcga
      601 atccaccggc ggcaccggga aatagccgcc cttcacgccg gggcggtggc ccatgttgcc
      661 gtcctcgtac ttgaagcgcg tgctccaggc ggcttcctga gactcgatct cgtagaacac
      721 gcggcccatg tcgttctgcc agcgcaccga gtcgaagatg aagaactccg gctccgggcc
      781 gaagtacgcg ctgtcggcga gcccggtgga tttcaggtat gcctcggcgc gcttggcgat
      841 cgagcgcggg tcgcggccgt aggcctgcag cgtcgagggc tccagcacgt cgcaatgcag
      901 caccagctgc gggtgggcac tgaacgggtc gaggtaggcg gtgtccgggt cgggcatcag
      961 gatcatgtcc gactcgttga tgcccttcca gccgacgatc gaggagccgt cgaacatctt
     1021 gccgtcctcg aacgtgccct cgtcgatcgc gtgtgccggg aaggtcacgt ggtggtgctt
     1081 gccgagcatg tcggcaaagc ggaaatcgac gaattcgatg tcgtgttcca cgatctggtc
     1141 gagcacatct ttcgcggtca ttgggttggc agccttggga tgaagtggac gggaagcgtc
     1201 gagggtcttt tggcaagtct gatgccaatg cacgcatcgt gtggaatcaa tgagttacgc
     1261 aatgcgccgt taccctgccg cacgaaaccg gtgcaccgtg atcgaacgta gcaccaacgc
     1321 ggtgcgggag taacgcggtt tccggccgct tgcgagggcg tgtgccgcgt cgagctggtc
     1381 gcggtgcgcc atgcaccacg aacgcccgtg gtctttccat cgtcccgccc gcgattggca
     1441 cgcgcgggcg cgggcgacgg atctattccg tcgtcgggcc agccgcgccg gcgtccgcgt
     1501 gcggcgcggt cgccgtgcgc cacagcaggg cggcgagttc gagcacgccg tcccgcacca
     1561 gggtgctggc ggtgaaggtg tgcggcagtg gccagtgcag gttgccaagc acgaagccgg
     1621 cgccggccac cagacccagg ctggtcaatg gacgttcgcg cgcgcgcgtc atcagcgcgg
     1681 ccgccggcgt gacgagggcc gcgcgccgca gggtgacttc ggcctgggcg gcgtgcaccg
     1741 cccggcattg cgcgcgcagc gtcatggcgc ttcctccgtg ccggcggcct gcgacgggtg
     1801 ctgcagggcg cgccacgccg cgcgtgacgc cggcaggctc agccaatgca ggcagcggcg
     1861 gaatgcggcg atcgcgagga tgagcagcag caattgcgct gccgcgagcg cggcgagcgc
     1921 cagcggccac gagtgccacc agccggccag caggacaccg agcaggccga gcacggtgag
     1981 gccgaaggcc accgccagcg ccactgtgac caatgccgcc agcagcagcc acgcgaccgc
     2041 gctgcgtgcc agcccgagct cggcgcgcag cagtcgccgg tgcgcgccca gcagggcgcg
     2101 g
//
LOCUS       DASSVL010000250         4144 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_330840, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000250 DASSVL010000000
VERSION     DASSVL010000250.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 4144)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4144)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4144
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_330840"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..443)
                     /locus_tag="VFM52_04315"
     CDS             complement(<1..443)
                     /locus_tag="VFM52_04315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017463140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease domain-containing protein"
                     /protein_id="HET8764424.1"
                     /translation="MTTTIQPRLTQVFRFLHARYADGVAELAYAFDDGEPLVERITFP
                     DAPVVPPEKQAAFDAALAMLHLIAGVSYYKAGVPHQIVVEGGALAADTADLLDALYLH
                     GLAEFAYRNNLDLRGRIHFPRKAGGDAAHAPALGLAPRTLVPIGGG"
     gene            complement(541..3156)
                     /locus_tag="VFM52_04320"
     CDS             complement(541..3156)
                     /locus_tag="VFM52_04320"
                     /EC_number="2.7.2.4"
                     /EC_number="4.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008210446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional aspartate kinase/diaminopimelate
                     decarboxylase"
                     /protein_id="HET8764425.1"
                     /translation="MTTNAPAPLAADAPWIVMKFGGTSVATLPRWQNIRELAASRRAE
                     GARVLVVVSALSGITDALKQLCAERDAGKRAAAAGAIAQRHQALLADMGLAMPATLGA
                     RLDELAKLAAQGPAHPGELAWSALIQAHGELLSSALGAAFLTHAGLPTQWVDARECLS
                     AFALPNQNGRTRLLSAMVDAKPDPALSARLAGQGDMFITQGFIARDADGHTVLLGRGG
                     SDTSAAYFGAMLRAARVETWTDVAGMFTANPRQVPTARLLQKLDYEEAQEIASTGAKV
                     LHPRCLSPLREPRVPLLIKDTNHPELEGTVIGPQVREHARSVKAISARKGITLVSMES
                     VGMWQEVGFLADVFAQFKKHGLSVDLISSAETNVTVSLDPTENLLDSDAVAALASDLA
                     KVCRVKVIAPCAAVTLVGRGMRSMLHMLSTVLAEFDQLRVHLISQSSNNLNLTFVVDE
                     DVVDTLVPHLHELLISGGALRADDDALFGPSWQTLYGAGEPVSATVWWRHAAERAQLL
                     ALAAQRTPRYVYHLPTARAQARALKALGAVDRVHYAVKANTHPAILRALAGEGLGFEC
                     VSPGELDAVIGAVPETTPLLFTPNFASRADYERGLATRATVTLDALHPMEHWGELFRG
                     REISLRLDLGRGLGHHEKVRTGGAGSKFGLPLDQLDAFLRLADTHGVIVRGLHAHLGS
                     GILKAEHWGEVHGQLASIADRIGSITYLDIGGGLGVPSHPGEAALDMAELDAVLRQVK
                     AAYPHYQVWLEPGRFLVADAGVLLTRFTQTKGKGAWRYLGVDTGMNSLIRPALYDAWH
                     EIVNLTRLDEPGTGLFQVVGPICESGDILGSDRRLPEPQEGDVVLIAQAGAYGKVMSS
                     QYNLRGDTEEVVLED"
BASE COUNT          645 a         1485 c         1415 g          599 t
ORIGIN      
        1 ccgccgccga tcggcaccag cgtgcgcggc gccaggccga gtgccggcgc gtgcgcggca
       61 tcaccgccgg ccttgcgcgg gaaatggatg cgcccgcgca ggtcgagatt gttgcgatag
      121 gcaaactcgg ccagcccgtg caggtacagc gcatccagca ggtcggcggt gtcggcagcg
      181 agcgcaccgc cctcgaccac gatctggtgc ggcacgccgg ccttgtagta gctgacgccg
      241 gcaatgaggt gcagcatcgc cagcgcggcg tcgaacgccg cctgcttctc cggcggcacg
      301 accggcgcgt ccggaaacgt gatgcgctcg accagcggct cgccgtcgtc gaacgcatac
      361 gccagctcgg cgacgccgtc ggcgtagcgt gcatgcagga aacggaacac ctgggtcagg
      421 cgcggctgga tggtcgtggt cactgtgtca tttctccgca agccgcgctc caccgcctgg
      481 ggcggagcga ttcatcgacc agccattatc ccggaaaccg gtgcggtcgc ggccggccgg
      541 tcaatcctcc agcaccactt cctcggtatc cccgcgcagg ttgtactgcg acgacatcac
      601 cttgccgtac gcaccggcct gcgcgatcag caccacgtcg ccttcctgcg gttcgggcag
      661 gcggcggtcg ctgccgagga tgtcgcccga ttcgcagatc gggccgacga cctggaacag
      721 gccggtgccc ggttcgtcca gccgggtgag gttgacgatc tcgtgccatg cgtcgtacag
      781 cgccggccgg atcaggctgt tcatgccggt gtccacgccg agatagcgcc acgcgccctt
      841 gcccttggtc tgggtgaatc gcgtgagcag cacgccggcg tcggcgacga ggaagcggcc
      901 gggctcgagc cacacctggt agtgcggata cgccgccttg acctggcgca gcaccgcgtc
      961 gagttcggcc atgtcgagcg ccgcctcgcc cgggtgcgaa ggcacgccga ggccgccgcc
     1021 gatgtcgaga tacgtgatgc tgccgatgcg gtcggcgatc gaggccagct ggccgtgcac
     1081 ctcgccccag tgctcggcct tcaggatgcc ggaccccaga tgcgcatgca ggccgcgcac
     1141 gatgacgccg tgcgtgtcgg cgaggcgcag gaaggcgtcg agctggtcga gcggcaggcc
     1201 gaacttggag ccggcgccac cggtgcgcac cttctcgtgg tgcccgaggc cgcggccgag
     1261 atccagacgc agcgaaatct cgcgaccgcg gaacagctcg ccccagtgct ccatcggatg
     1321 cagtgcgtcg agcgtcaccg tggcgcgcgt cgccaggccg cgttcgtaat ccgcgcgcga
     1381 ggcgaagttc ggcgtgaaca gcagcggcgt cgtttccggc accgcgccga tgaccgcgtc
     1441 cagctcgcct ggcgagacgc actcgaaacc aaggccttcg ccggccagtg cgcgcaggat
     1501 cgccgggtgg gtgttcgcct tcaccgcata gtgcacgcgg tcgacggcgc cgagtgcctt
     1561 gagcgcgcgt gcctgcgcgc gcgccgtcgg caggtgatag acgtagcgcg gcgtccgctg
     1621 cgccgccagc gcgagcagct gcgcgcgttc ggccgcatgc cgccaccaga cggtggcgct
     1681 caccggttcg ccggcgccgt acagcgtctg ccagctcggg ccgaacagcg cgtcgtcgtc
     1741 cgcgcgcagc gcgccgcccg agatcagcag ctcatgcagg tgcggcacca gcgtgtcgac
     1801 gacgtcctcg tcgaccacga aggtgaggtt caggttgttc gacgactgcg agatgaggtg
     1861 cacgcgcagc tggtcgaatt cggcgagcac cgtcgacagc atgtgcagca tcgagcgcat
     1921 gccgcgcccg accagcgtca ccgccgcgca cggcgcgatg accttgaccc ggcacacctt
     1981 cgccaggtcg gaagccagcg cggcgaccgc gtccgagtcg agcaggttct cggtcgggtc
     2041 gagcgacacg gtgacgttgg tttcggccga actgatgagg tccaccgaca gcccgtgctt
     2101 cttgaactgc gcgaacacgt cggcgaggaa gcccacctcc tgccacatgc cgaccgattc
     2161 catcgacacc agggtgatgc ccttgcgcgc gctgatcgcc ttgacgctgc gcgcgtgctc
     2221 gcgcacctgc gggccgatca ccgtgccctc gagctcgggg tggttggtgt ccttgatcag
     2281 cagcggcacg cgcggctcgc gcagcggcga caggcagcgc gggtgcagca ccttggcgcc
     2341 ggtcgaggcg atttcctgcg cctcctcgta gtcgagcttc tgcagcagcc gtgcggtcgg
     2401 cacctggcgc gggttggcgg tgaacatgcc ggccacgtcg gtccaggtct ccacccgcgc
     2461 ggcgcgcagc atcgcgccga agtacgcagc cgaggtgtcc gaaccgccac gcccaagcag
     2521 caccgtgtgg ccgtcggcat cacgcgcgat gaagccctgg gtgatgaaca tgtcgccctg
     2581 cccggccagt cgcgcggaaa gcgccgggtc gggcttcgcg tcgaccatcg ccgagagcag
     2641 gcgcgtgcgc ccgttctggt tgggcagcgc aaacgcggac aggcactcgc gcgcatcgac
     2701 ccattgcgtg ggcaagccgg cgtgggtcag gaacgcagcg ccgagcgcgc tcgacaagag
     2761 ttcgccatgc gcctggatca gcgccgacca cgccagttcg ccggggtggg ccggcccttg
     2821 cgccgccaac ttggccagct cgtccagccg cgcgccgagc gtcgccggca tggcgagtcc
     2881 catgtcggca agcaaggcct ggtggcgttg cgcgatcgcg ccggccgccg ccgcgcgctt
     2941 gccggcatcg cgctcggcgc acagctgttt cagggcatcg gtgatgccgg acagcgcgga
     3001 aaccaccacc agcacccgcg caccctcggc gcggcggctg gcggccagtt cacggatgtt
     3061 ctgccagcgc ggcagcgtgg cgacactggt gccgccgaac ttcatcacga tccaaggggc
     3121 gtccgcggca agcggcgcgg gggcgttcgt ggtcacggtc gatcaggcca tggttgcgag
     3181 gggacaatcg cgcgagtgtt gcgctgccgc aaaacaattg caaggcgcgc aaccggttcg
     3241 atccatggac gtctggactt ccattcggca cgctggcgac gtcaggaaaa gtcatggacg
     3301 ccacgacaag cgcgtgcgga acgtcgagac aaagccaccc atggcgggct tccccgcgaa
     3361 acacatgcac cttctcgcgc ccgtttcacc gcgtcaacgc gtcattggct cacaccggcc
     3421 tgccaatgga ccaccgcggg cgtgcaacgc aaccggaagg ggcaaacacc ggtccgactg
     3481 ccggcgcgac gccgcccaag ccgccggcca acctcaccgg ccgcagcgtg cccggcgtcg
     3541 cgcccaacgt cgccccggaa accggctgcg tctcgatccc gacgaccaat cgcggggtga
     3601 cctccggcga ggtcggcacc agcttcatcg cgccgcagcg caacggtatc ggccgcactg
     3661 ctgacgcacg gcaccgggcg tcgcatcgct tctggaacct gccgttctac ctgctgcgga
     3721 acctttccgg gcaggcccgt ggtcggcgtc cagcaccgtt tccgccggcg acaatcggtt
     3781 ccaccaggga gcgctcacca caccgcctgg cgccggcttc ggcacgctcg acgtggccaa
     3841 cgcagcccgt tgcccatcac ccgctgaccg cgccaagcgc cgcggccgtg gtttttgcgc
     3901 gccattcagc gccgccatgt ccaccgtggg cgcggcgatg ccacaatgcg cgcgatcagt
     3961 tcaaggagat tccgcatggc gagcgcccag gcccacggcg tgcccaccac cgccgcaggc
     4021 accgcaaagc cagcgatggc gcgcgccggc atcgacatca tcgtcaacgg cgaggcgttc
     4081 cggcacaccg gtgatccgca gatgccactg ctgtggtacc tgcgcgacat cctgcgcctg
     4141 accg
//
LOCUS       DASSVL010000251         5546 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_514188, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000251 DASSVL010000000
VERSION     DASSVL010000251.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 5546)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5546)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5546
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_514188"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..550
                     /gene="kdsB"
                     /locus_tag="VFM52_04325"
     CDS             <1..550
                     /gene="kdsB"
                     /locus_tag="VFM52_04325"
                     /EC_number="2.7.7.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014402659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008690 - 3-deoxy-manno-octulosonate
                     cytidylyltransferase activity [Evidence IEA];
                     GO_process: GO:0009244 - lipopolysaccharide core region
                     biosynthetic process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="3-deoxy-manno-octulosonate cytidylyltransferase"
                     /protein_id="HET8764426.1"
                     /translation="HASGSDRLAECAAQCGWPADTIVVNLQGDEPFAPASGIREVARA
                     LAEDDAPMATLATPITDVDEVFDPNVVKLVRAANGHALYFSRAPLPWARDAFARGRDA
                     VPDGVPYLRHIGIYAYRAGFLASYTRLVRTPLECAESLEQLRVLEHGHAIAVRLTPEP
                     FPPGIDTEADLARAERWFRDQE"
     gene            553..1020
                     /locus_tag="VFM52_04330"
     CDS             553..1020
                     /locus_tag="VFM52_04330"
                     /EC_number="3.1.3.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019466724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004725 - protein tyrosine phosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0006470 - protein dephosphorylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="low molecular weight
                     protein-tyrosine-phosphatase"
                     /protein_id="HET8764427.1"
                     /translation="MPRILFVCLGNICRSPLAEWVAREQFAANHLDVGVASCGTGGWH
                     AGEGADPRMVAAARAAGHDLSAHRARQLRARDYDVFDWLLAMDHDNLAALRQLANSPE
                     QVARTALFLEWTSAAPPQAFPDPWYGNAADFADAVKLAERGVAGLVERLKRGR"
     gene            1111..2937
                     /gene="uvrC"
                     /locus_tag="VFM52_04335"
     CDS             1111..2937
                     /gene="uvrC"
                     /locus_tag="VFM52_04335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007081879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009380 - excinuclease repair complex
                     [Evidence IEA];
                     GO_function: GO:0009381 - excinuclease ABC activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrC"
                     /protein_id="HET8764428.1"
                     /translation="MPVDSPPPFDGKAFVRTLTTSPGVYRYFDAAGDLLYVGKAANLK
                     KRVSNYFLKPRKEARIAAMVAQIAHAEITLTRTESEALLLESQLIKTLKPRYNILLRD
                     DKSYPYIYLSTADEFPRIALHRGAKNLPGRYFGPFPSVHAVRESISLLQKLFKIRTCE
                     DSFFRNRTRPCLLYQIGRCSAPCVALINRDDYARDVRHVEMFLDGRSSAVIDELVAAM
                     EAASQALAFERAAKLRDQIAGLRQLQAQHHVQGASADMDVIACRIESGLACVSVLYFR
                     DGISLGTRDYFPRLPLDAEPGDLLAQFIAQYYLDRLVPRELVIGNELEDEAVLAEALT
                     QHAGHAVEIKSRVRSERAQFLQMAERNAQAALTQRLASRQTLGTRFEDLRKLLELPEP
                     PHRLECFDISHTRGELTVASCVVFGQEGAEKSHYRRFNIDGITPGDDYAAMHQALTRR
                     FRKVAEGEGIKPDVLLIDGGRGQVAQALDVLAELGVTGIHVVGVAKGPARRPGEETLI
                     LVDQGREIHPGPTSPALHLVAAVRDESHRFAIEGHRHRREKARERSVLEDVPGVGARR
                     RSALLRAFGGLQGVTAAGVEELMQVSGINREIAERVYAALHG"
     gene            2995..3600
                     /gene="pgsA"
                     /locus_tag="VFM52_04340"
     CDS             2995..3600
                     /gene="pgsA"
                     /locus_tag="VFM52_04340"
                     /EC_number="2.7.8.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019466722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008444 -
                     CDP-diacylglycerol-glycerol-3-phosphate
                     3-phosphatidyltransferase activity [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--glycerol-3-phosphate
                     3-phosphatidyltransferase"
                     /protein_id="HET8764429.1"
                     /translation="MHINLPTWLTLFRVLLLPVMVVVFYLPFPGHNITAAVVFVLAAV
                     TDWLDGFLARRLKLTSAFGAFLDPVADKLMVAVTLFLLVESHPEGWSGVVMAVTAAVI
                     VGREISISALREWMAEIGMRATVKVAFIGKLKTVMQMVALVVLIVQHEKEATALRLYH
                     IGEGLLVIAGILTIWSGLYYLHAAWPSLSGDAMPQGDRRDG"
     gene            3652..3727
                     /locus_tag="VFM52_04345"
     tRNA            3652..3727
                     /locus_tag="VFM52_04345"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:3685..3687,aa:Gly,seq:gcc)
     gene            3795..3868
                     /locus_tag="VFM52_04350"
     tRNA            3795..3868
                     /locus_tag="VFM52_04350"
                     /product="tRNA-Cys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:3827..3829,aa:Cys,seq:gca)
     gene            complement(3920..>5546)
                     /gene="recD"
                     /locus_tag="VFM52_04355"
     CDS             complement(3920..>5546)
                     /gene="recD"
                     /locus_tag="VFM52_04355"
                     /EC_number="3.1.11.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008212631.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009338 - exodeoxyribonuclease V complex
                     [Evidence IEA];
                     GO_function: GO:0008854 - exodeoxyribonuclease V activity
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="exodeoxyribonuclease V subunit alpha"
                     /protein_id="HET8764430.1"
                     /translation="LRRNWDNERAVARGVLDRIGYPPPSPTVLRAELDRLFPQRAAGA
                     PDWQRIACALAARNGFAVITGGPGTGKTTTVVRLLALLQTVHRRDHATPLRIHLAAPT
                     GKAAARLGEAIGTQVAQLDVDAGVRAAIPTEVTTLHRLLGARPDTRRYRHDRSHPLYL
                     DVLVVDEASMVDLEMMAALLAALPASARLILLGDKDQLASVEAGAVLGDLCRFADHPH
                     YDAATLAWLEAATGIAVDAAAARPAVPVEQAIASLRTSHRFAADSGIGQLASAVNAGD
                     ATTAQALLAGTGGDLAWLPGADDQVLDALVLGHVVGTSATPPHHGLVGYLDWLQAARP
                     AAGANEDAYAGWASGALAALNRFQLLCALRQGPLGVDGINQRVAHLLHRQHRIDAEEG
                     WYEGRPVLVTRNDYRLGLMNGDVGLCLRVPAPASTQDTRLVVAFPAAPSPRADAAAIR
                     FVAPSRLTEVETAFALTVHKAQGSEFDHVALLLPPAASAVATRELLYTAITRARRSFT
                     LVGTEAVIAASIARRTQRHSGLGARLQAGETAH"
BASE COUNT          815 a         1867 c         2007 g          857 t
ORIGIN      
        1 ccacgcgtcc ggcagcgatc ggctggccga atgcgcggcg cagtgcggct ggccggccga
       61 caccatcgtg gtgaacctgc agggcgacga gccgttcgcg ccggcttccg gcattcgcga
      121 ggtggcgcgc gcgctggccg aggacgacgc gccgatggcg acgctggcga cgccgatcac
      181 cgacgtggac gaggtcttcg atcccaacgt ggtgaagctg gtgcgcgccg cgaacgggca
      241 cgcgctgtac ttcagccgcg caccgctgcc gtgggcgcgc gatgccttcg cccgcgggcg
      301 cgacgcggtg ccggacgggg tgccgtacct gcgccacatc ggcatctacg cctaccgcgc
      361 cgggtttctt gccagttaca cccggctcgt gcgcacgccg ctggaatgcg cggaatcgct
      421 cgaacagctg cgcgtgctcg aacacggcca cgcgatcgcg gtgcggctca cgcccgagcc
      481 gttcccgccg ggcatcgata ccgaggccga cctggcgcgc gccgagcgct ggttccgcga
      541 tcaggaatag gcatgccgcg catcctgttc gtctgcctgg gcaatatctg tcgctccccg
      601 ctggccgaat gggtggcgcg cgagcagttc gctgcgaacc atctcgatgt cggcgtggcc
      661 tcgtgtggca ccggtggctg gcacgctggc gaaggcgccg acccgcgcat ggtggccgcg
      721 gcgcgggccg ccggccacga cctttcggcg catcgcgcac ggcaactgcg tgcccgtgac
      781 tacgacgttt tcgattggct gctggcgatg gaccacgaca acctcgccgc gctgcgccag
      841 ctggcgaact cgcccgagca ggtcgcccgc acggcgttgt ttctcgaatg gacgagcgcc
      901 gcgccgccgc aggcgttccc cgatccgtgg tacggcaatg cagccgattt tgccgacgca
      961 gtgaaactcg ccgaacgcgg cgtcgccggt ctcgtcgagc gcctgaaacg aggcaggtag
     1021 gtcggattca tcccgacccg cccttcgcgc cccggcatcc actgacctgc gtcgcccggc
     1081 accgccgtcg caccttctac aattgccggc atgcccgttg attcaccgcc accgttcgac
     1141 ggcaaggcct tcgtccgcac gttgaccacc tcgcccggcg tctatcgcta cttcgatgcc
     1201 gccggcgatc tgctgtacgt cggcaaggcc gcgaacctca agaagcgcgt cagcaattat
     1261 ttcctgaagc cgcgcaagga ggcccgcatc gccgcgatgg tggcgcagat cgcgcacgcc
     1321 gagatcacgc tgacgcgcac cgagagcgag gcgctgctgc tcgagtcgca gctgatcaag
     1381 acgctcaagc cgcgctacaa catcctgctg cgcgatgaca agagctatcc gtacatctac
     1441 ctgtcgaccg cggacgagtt tccgcgcatc gcgttgcacc gcggcgcgaa gaacctgccg
     1501 gggcgctatt ttggcccgtt ccccagcgtg cacgcggtgc gcgagagcat cagcctgctg
     1561 cagaagctgt tcaagatccg cacctgcgag gacagcttct tcaggaaccg cacgcggcca
     1621 tgcctgctgt accagatcgg ccgttgcagc gcgccgtgcg tcgcgctgat caaccgcgac
     1681 gactacgcgc gggacgtgcg ccacgtggag atgtttctcg acggccgcag cagcgcggtg
     1741 atcgacgagc tggtggcggc gatggaggcg gccagtcagg cgctggcgtt cgaacgcgcg
     1801 gcgaagctgc gcgaccagat cgccgggctg cgccagctgc aggcgcagca ccacgtacag
     1861 ggcgcgagtg ccgacatgga cgtgatcgcg tgccgcatcg agtccggcct ggcctgcgtc
     1921 agcgtgctgt atttccgcga cggcatcagc ctcggcacgc gcgattattt cccgcgcctg
     1981 ccgctggatg ccgagccggg cgatctcctc gcgcaattca tcgcgcagta ctacctggat
     2041 cgcctggtgc cgcgcgagct ggtgatcggc aacgagctgg aggatgaggc ggtgctggcc
     2101 gaggcgctga cgcagcatgc cgggcacgcg gtggagatca agagccgcgt gcgcagcgag
     2161 cgcgcgcagt tcctgcagat ggccgagcgc aacgcgcagg ccgcgctcac ccagcgcctc
     2221 gctagccggc agacgctggg cacgcgcttc gaggacctgc gcaagctgct ggagctgccc
     2281 gagccgccgc accggctgga atgcttcgac atcagccaca cgcgcggcga gctcaccgtg
     2341 gcctcgtgcg tggtgtttgg ccaggaaggc gcggagaagt cccactaccg ccgcttcaac
     2401 atcgacggca tcacccccgg cgacgattac gccgccatgc accaggcgct gacccggcgg
     2461 tttcgcaagg tggccgaagg cgaaggcatc aagcccgacg tgctgctgat cgacggcggc
     2521 cgcggccagg tggcgcaggc gctggacgtg ctggccgagc tgggtgtcac cggcatccat
     2581 gtcgtcggcg tggcgaaggg gccggcgcgg cggccgggcg aggaaaccct gatcctcgtc
     2641 gaccagggcc gcgagatcca tcccgggccg acctcgccgg ccctgcactt ggtcgccgcg
     2701 gtgcgcgacg agtcgcaccg cttcgcgatc gagggccacc gccatcggcg cgagaaggcg
     2761 cgcgagcgca gcgtgctgga ggacgtgcca ggcgtcggcg cgcggcgccg gtcggcgttg
     2821 ctgcgtgcgt tcggcggcct gcagggtgtg accgccgccg gcgtcgagga gctgatgcag
     2881 gtgtcgggca tcaaccgcga gatcgccgag cgggtctacg ccgcgctgca tggctgacgg
     2941 attggggtgc cgccgggcgg cgtgcgacac tgggcgaaat ccgcaggcac ctccatgcac
     3001 atcaatctcc ccacctggct caccctgttc cgcgtgctgc tgctgccggt catggtggtg
     3061 gtgttctacc tgccgttccc cggccacaac atcacggccg ccgtggtgtt cgtgctggcg
     3121 gcggtgaccg actggctgga cgggttcctc gcgcgccggc tcaagctgac ctcggcgttc
     3181 ggcgcgttcc tcgatccggt ggccgacaag ctgatggtgg cggtgacgct gttcctgctg
     3241 gtggagtcgc acccggaggg atggtccggc gtcgtcatgg cggtgaccgc ggcggtcatc
     3301 gtggggcgcg agatcagcat ctcggcgctg cgcgaatgga tggctgaaat cggcatgcgc
     3361 gccaccgtca aggtcgcctt catcggcaag ctcaagaccg tgatgcagat ggtggcgctg
     3421 gtggtgctga tcgtgcagca tgagaaggag gccacggcgc tgcgcctgta ccacatcggc
     3481 gaaggcctgc tggtgatcgc cggcatcctc accatctggt cgggccttta ctacctgcat
     3541 gcggcgtggc cgagcctcag cggggacgcc atgccgcagg gcgaccgccg cgacggctga
     3601 ccggccacgc ttgacgcatc gcgctcgcgt attagaatgc gcgctcctta cgcgggaata
     3661 gctcagttgg tagagcacga ccttgccaag gtcggggtcg cgagttcgag tctcgtttcc
     3721 cgctccagtt tcagcgaaac ctcgcctcgt cggggttttg ttttatcagc gcccgagtcc
     3781 gggccgcgcc atgtggccag gtggcagagt ggtcatgcag cggactgcaa atccgcgtac
     3841 gccggttcaa ttccgaccct ggcctccaca tgaaaaccag caaaagggcg ccttcgggcg
     3901 cccttttgct gggtcgcgat cagtgtgccg tttctcccgc ctgcaggcgc gcgccgagtc
     3961 cggagtggcg ttgcgtgcgg cgggcgatgc tggccgcgat cacggcttcg gtgccgacca
     4021 gggtgaagct gcggcgggcg cgggtgatgg cggtgtacag cagctcgcgg gtcgccaccg
     4081 cactggctgc gggcggcagc agcagggcga cgtggtcgaa ctccgagccc tgggccttgt
     4141 gcacggtgag cgcgaacgcg gtttctacct cggtgagccg ggatggggcg acgaagcgga
     4201 tggctgccgc gtcggcgcgt ggagacggcg cggcagggaa cgcgacgacg aggcgggtgt
     4261 cctgcgtcga tgccggcgcc ggcacgcgca ggcacaggcc gacatcgccg ttcatcaggc
     4321 ccaggcggta atcgttgcgg gtgaccagca ccgggcggcc ttcgtaccag ccttcctcgg
     4381 catcgatgcg gtgctggcga tggagcaggt gggcgacgcg ctggttgatg ccgtcgacgc
     4441 cgagcggacc ctggcgcaga gcgcacagca gctggaatcg gttgagcgcg gcgagcgccc
     4501 cgctggccca accggcatac gcatcttcat ttgcgccagc ggcgggccgc gctgcctgca
     4561 gccagtcgag gtaaccgacc aggccatggt gtggaggcgt ggccgaagtc ccgacgacgt
     4621 ggccaagaac cagcgcgtcg agcacctggt cgtcggcacc cggcaaccag gcgagatcgc
     4681 cgccggtgcc tgcaagcagc gcttgcgcgg tggtggcgtc gccggcgttg acggcgctgg
     4741 caagctggcc gatgccgctg tcggcggcga agcggtggct ggtgcgcaag ctggcgatgg
     4801 cttgttcgac cggtaccgcc ggccgggcgg ccgcggcatc cacggcgatg ccggtggcgg
     4861 cttccagcca ggcgagcgtc gcggcgtcgt agtgcgggtg atcggcgaag cggcacaggt
     4921 cgccgagcac ggcgccggct tcgaccgagg cgagctggtc cttgtcgccc agcaggatca
     4981 ggcgcgcgct ggcgggcagc gcggcgagca gcgcagccat catttccagg tcgaccatcg
     5041 atgcctcgtc gaccaccagc acgtcgagat acagcggatg gctgcggtcg tggcggtagc
     5101 gacgcgtatc cgggcgcgcg ccaagcaggc gatgcagggt ggtgacctcg gttggaatcg
     5161 cggcgcgcac cccggcgtcg acgtcgagct gcgcgacctg ggtaccgatg gcctcgccga
     5221 gccgcgccgc cgccttgccg gtcggcgctg caaggtggat gcgcagcggc gtggcgtggt
     5281 cgcgccggtg cacggtctgc agcagggcga gcaggcgcac cacggtcgtg gtcttgccgg
     5341 tgccggggcc gccggtgatc acggcgaagc cattgcgcgc ggccagcgcg caggcgatgc
     5401 gctgccagtc gggtgcgccg gcagcgcgct gcgggaacag ccgatcgagc tcggcgcgca
     5461 acaccgtggg cgacggcggc gggtacccga tgcgatcgag cacgccgcgc gccaccgcgc
     5521 gttcgttgtc ccaattgcgg cgcagg
//
LOCUS       DASSVL010000252         2955 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_33968, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000252 DASSVL010000000
VERSION     DASSVL010000252.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2955)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2955)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2955
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_33968"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            27..938
                     /gene="lgt"
                     /locus_tag="VFM52_04360"
     CDS             27..938
                     /gene="lgt"
                     /locus_tag="VFM52_04360"
                     /EC_number="2.5.1.145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007079964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008961 -
                     phosphatidylglycerol-prolipoprotein diacylglyceryl
                     transferase activity [Evidence IEA];
                     GO_process: GO:0009249 - protein lipoylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolipoprotein diacylglyceryl transferase"
                     /protein_id="HET8764431.1"
                     /translation="MSQPFVDAINPVAFHLGPVQVHWYGLMHLAGFFAAVFLGEYRRR
                     KGRLPVGREAVSDLFFYAMMGVIVGGRVGYMLFYYAGGLRWIWTDPLALFRVWDGGMS
                     FHGGLLGVLAVGLWWSRKHALHFFDTVDFVAPMVPIGLGLGRFGNFINGELWGKPTTL
                     PWGMIFPEAHGEDVAYVAAHPAWQAQLAQWGGLVRQPSQLYEMLLEGVVMFTVLWVVS
                     LKPRRRYLVSGLFALMYGCFRFAIEFVRLPDIQLGYLAFGWVTMGQILSLPLIAVGVW
                     LLWLSRRAPVLPLADPTVAGAAGASDK"
     gene            complement(1064..>2955)
                     /locus_tag="VFM52_04365"
     CDS             complement(1064..>2955)
                     /locus_tag="VFM52_04365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007507087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="class I tRNA ligase family protein"
                     /protein_id="HET8764432.1"
                     /translation="VDLTSEVLADGRPGGRTAITEPALQAVRSGAVIEPMLTDQWFVD
                     LTSETLRDGRPGGRKAITEPALQAVRGGDIKFVPENWSTTYTQWLENIQDWCISRQLW
                     WGHRIPAWYDEAGHIFVGEDEADARAHATVAPVGALRQDEDVLDTWFSSALWPFSTLG
                     WPADGPVKNERGEVVANWANDQIFLPSAVLVTGFDIIFFWVARMVMTTKYFTGQVPFR
                     EVYINAIVRDAEGQKMSKSKGNTLDPLDLIDGIELEPLVTKSTKSLLIPQVRAKVEKR
                     IRKEYPDGIKAIGTDALRFTFAALASYSRTINFDLKRAEGYKAFCNKLWNAARFVLMN
                     LANGETVAAAGTPPATEAERWILTRLSTTLAEVESHFATYRFDHLAQALYEFVWNEYC
                     DWFLELAKPALSGSDAAAAASTRRTLLVVLEAVLRALHPVIPFITEEIWKDVAPHLAL
                     AEGGVLARPYPQAGEFARDDAASAEIEWFKAVLSGIRKIRSEMNIAPGKVIPLLLADG
                     EASDHARAAKFAGQITFLARTEAPQWIAPGAAEPATAAAVVGSLRVLIPLAGLIDVGA
                     EKARLAKEIGKIEGEIKKCEGKLGNANFVAHAPAEVVAQERQRIADWNTQLGALREQA
                     AKLGA"
BASE COUNT          394 a          982 c         1017 g          562 t
ORIGIN      
        1 ttcgtctttc cggcgtgtgc ccgctcatgt cgcaaccctt cgtcgacgcg atcaaccctg
       61 tggcttttca tctcggcccg gtgcaggtgc actggtacgg gttgatgcat ctcgccggtt
      121 tctttgccgc cgtgttcctc ggcgaatacc gccggcgcaa gggccggctg ccggtggggc
      181 gcgaggcggt gagcgacctg ttcttctacg cgatgatggg cgtgatcgtc ggcgggcgcg
      241 tcggctacat gttgttctat tacgccggcg gcctgcgctg gatctggacc gacccgctcg
      301 cgctgttccg cgtctgggac ggcggcatga gtttccacgg cggcctgctc ggcgtgctcg
      361 cggtgggctt gtggtggtcg cgcaagcacg cgctgcactt tttcgacacc gtggatttcg
      421 tcgcgccgat ggtgccgatc ggcctcggcc tcgggcgctt cggcaacttc atcaacggcg
      481 agctgtgggg caagcccacg acgctgccgt ggggcatgat tttccccgag gcgcacggcg
      541 aggatgtggc ctacgtcgcc gcgcatccgg cgtggcaggc gcagctggcg cagtggggcg
      601 ggctggtgcg ccagccttcg cagctctacg agatgctgct cgaaggcgtg gtgatgttca
      661 ccgtgctgtg ggtggtgtcg ctcaagccgc gccggcggta tctcgtttcc ggcctgttcg
      721 cgctgatgta cggctgcttc cgtttcgcga tcgagttcgt gcgcctgccg gacatccagc
      781 tcggctacct cgctttcggc tgggtgacga tggggcagat cctgtcgttg ccgttgatcg
      841 ccgtgggcgt gtggctgctg tggctgtcgc gccgcgcgcc tgtcctgccg ttggccgacc
      901 cgaccgtcgc tggcgccgca ggcgccagcg acaaataggc aaaggaagct tttgcttttc
      961 gggattccct tgcggatcag aacgcactga accccgaacc cattcccgcc aaacctcccc
     1021 ttgaagggga ggcttcaagg catggggttg cgcatcctgc gaatcaggcg ccgagtttcg
     1081 ccgcctgttc gcgcagtgcg ccgagctggg tgttccagtc ggcgatgcgc tggcgctcct
     1141 gggcgacgac ctcggctggc gcgtgggcga cgaagttggc gttgcccagc ttgccttcgc
     1201 acttcttgat ctcgccttcg atcttgccga tctccttggc aaggcgcgcc ttctcggcgc
     1261 ccacgtcgat cagcccggcg agcgggatca gcacgcgcag cgagccgacg acggccgcgg
     1321 cggtggccgg ttcggcggcg cccggcgcga tccactgtgg cgcttcggtg cgcgcgagga
     1381 aggtgatctg cccggcaaac ttggcggcgc gcgcgtggtc gctggcctcg ccgtcggcga
     1441 gcagcagcgg gatcaccttg cccggcgcga tgttcatttc cgatcggatc ttgcggatgc
     1501 cggacagcac cgccttgaac cactcgatct ccgcgctggc cgcgtcgtcg cgcgcaaact
     1561 cgccggcctg cgggtaggga cgtgccagca cgccgccttc ggccagcgcg agatgcggcg
     1621 cgacgtcctt ccagatttcc tcggtgatga acgggatcac cggatgcagc gcgcgcagca
     1681 cggcttccag caccaccagc agcgtgcggc gggtggatgc cgcggccgct gcgtcgctgc
     1741 cgctcaacgc cggcttcgcc agctccagga accagtcgca atactcgttc cacacgaact
     1801 cgtacagcgc ctgcgcgagg tggtcgaaac ggtacgtggc gaagtggctc tcgacttcgg
     1861 cgagcgtggt cgacaggcgg gtgaggatcc agcgctcggc ttcggtggcc ggcggcgtgc
     1921 cggcagcggc gaccgtctcg ccgttggcga ggttcatcag cacgaaccgc gcggcattcc
     1981 acagcttgtt gcagaacgcc ttgtagccct ccgcgcgctt caggtcgaag ttgatggtgc
     2041 ggctgtagct ggccagcgcg gcgaaggtga agcgcagcgc atcggtgccg atcgccttga
     2101 tcccgtccgg gtattccttg cggatgcgct tctccacctt ggcgcgcacc tgcgggatca
     2161 gcagcgactt cgtcgatttc gtcaccagcg gctccagctc gatgccgtcg atgaggtcga
     2221 gcgggtcgag cgtgttgccc ttcgacttgg acatcttctg gccttcggcg tcgcgcacga
     2281 tggcgttgat gtacacctcg cggaacggca cctggccggt gaaatacttc gtggtcatca
     2341 ccatccgggc gacccagaag aagatgatgt cgaagccggt gaccagcacg gcgctgggca
     2401 ggaagatctg gtcgttggcc cagttcgcca ccacctcgcc gcgctcgttt ttcaccgggc
     2461 cgtcggccgg ccagcccagc gtggagaacg gccacagcgc ggagctgaac caggtgtcga
     2521 gcacgtcctc gtcctgcctc agcgcgccga ccggcgcgac ggtggcatgc gcgcgcgcgt
     2581 cggcctcgtc ctcgcccacg aagatgtggc cggcctcgtc gtaccacgcg gggatgcgat
     2641 ggccccacca gagctggcgg ctgatgcacc agtcctggat gttctccagc cactgcgtgt
     2701 aggtggtcga ccagttctcc ggcacgaatt tgatatcgcc gccgcgcacc gcctgcagcg
     2761 ccggctcggt gatcgccttg cgcccgccgg ggcggccgtc gcgcagcgtc tcggaggtga
     2821 gatcgacgaa ccactggtcg gtcagcatcg gctcgatcac cgcgcccgag cgcaccgcct
     2881 gcagtgccgg ctcggtgatc gccgtgcgcc cgccggggcg accgtcggcg agcacttcgg
     2941 acgtcaggtc gacga
//
LOCUS       DASSVL010000253         4168 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_824977, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000253 DASSVL010000000
VERSION     DASSVL010000253.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 4168)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4168)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4168
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_824977"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            9..2057
                     /locus_tag="VFM52_04370"
     CDS             9..2057
                     /locus_tag="VFM52_04370"
                     /EC_number="3.2.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015448822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009341 - beta-galactosidase complex
                     [Evidence IEA];
                     GO_function: GO:0004565 - beta-galactosidase activity
                     [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-galactosidase"
                     /protein_id="HET8764433.1"
                     /translation="MADLAVPAASVRVGLQHVAGGAVETAADGVAQRRYTFAPAPAPA
                     LTLAPAQGTWNWRGQGELHLRVQNAMPWAVTLDVAVDSGTGQRLRAIVGLPAGPAQTL
                     VLPLAPTSPLAFGMQKGPARPFDANGQRVLLATTVAGQFDAADVHAVRVSMPAPQAPQ
                     SILLGRLDTVPGTPLLHEAYTGIVDRYGQYTREAWPEKIADDAALRAAVKRPPAAATG
                     IGGDRYGGRLDVRLPATGWFRTQKSGGRWWLVTPDGHGFFSLGVDATTAEGTRAYVQG
                     RDAMFRDLPPDSGAWAAFYGTSDSRDPQRGAGAGRCCDHGRWFDFYAANLYRVDGANW
                     LAAWRTRTLARLKAWGFNTLADWSDPALGAMHQLPYTRELDIRGEFGSVSTGRDLWGR
                     MPDPFDPRFASAVDAAAAEAAQGVRNDPWLLGYFAGNELSWAAWSADGRWALAIGTLR
                     GEARSAAKQAFVAGLKQKYATPGKLAAAWGIALSSWQALDATNFPAPTPNAAHPAIAA
                     DYSAWLSRYAGQFFRIVATAIHRHDPHHLYLGSRFAMKTPEAVAMCAKYCDVVSFNVY
                     ADLPQHGYDAVAMRKLDKPVLISEFSFGSDDRGPFGNGVVSVETEAQRGVAYARYLQA
                     AASDPDIVGTHWFEYVDEPVAGRLLDGENSHFGLVGVTDIPFAGFIEAVRKANAELRH
                     "
     gene            2104..2868
                     /locus_tag="VFM52_04375"
     CDS             2104..2868
                     /locus_tag="VFM52_04375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007508732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NRDE family protein"
                     /protein_id="HET8764434.1"
                     /translation="MCLIAVAWQVHPRWRLVLAGNRDEQHARPSAPLARWDDLPIVAG
                     RDLKAGGTWLGVTDGGRVSVVTNVRDPRDPQLGQSRGLLVSDFLAGDDDAALHAQALA
                     ARAADYRPFNLLTFDAYAGYYLGNRPGARMQAVTSGVHALSNAAFDTPWPKTCTLAAR
                     VEEWVAAGSEDFAPLFATLADERPAPDAELPDTGVGIELERRLSPAFIRAREYGTRAS
                     TVVAIDHAGAGIIVERRFGPDGVPLGERTMRFGQVD"
     gene            complement(2948..3343)
                     /locus_tag="VFM52_04380"
     CDS             complement(2948..3343)
                     /locus_tag="VFM52_04380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003476921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YchJ family metal-binding protein"
                     /protein_id="HET8764435.1"
                     /translation="MKPAAPPCPCGNPAGYAACCAPLIDGVRPAISAEALMRSRYTAY
                     VLRREDYLLATWHASTRPAALDLAAQHPAPTWLGLTVKHASTNGADHATVEFVARYRL
                     GGASAQRQHETSRFVREGDRWYYLDGVVD"
     gene            complement(3340..3537)
                     /locus_tag="VFM52_04385"
     CDS             complement(3340..3537)
                     /locus_tag="VFM52_04385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007508724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8764436.1"
                     /translation="MVAFLLWLLLFILCWPIALLALVLYPIVWLICLPLRLVGITVGA
                     VFAFLGAVLTLPARLLRGRPT"
     gene            complement(3597..4145)
                     /locus_tag="VFM52_04390"
     CDS             complement(3597..4145)
                     /locus_tag="VFM52_04390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007810014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HutD family protein"
                     /protein_id="HET8764437.1"
                     /translation="MSILHLADCPPRPWKNGLGRTRELAIHPPGAGMDDFLWRVSVAE
                     VTAAAPFSAYPGVDRVIALLDGDGFTMHLGDGREHSLTAPCTPFAFAGETPVAMTLAG
                     KPGRDFNLMLRRGRVRGGISVWRGAGTHTPGDGVALVYCARGRIDSRDGTLGAGDAWR
                     PGDGTLVLHADAVALVVAVTSG"
BASE COUNT          593 a         1448 c         1556 g          571 t
ORIGIN      
        1 cggcgcaggt ggccgacttg gcggtaccgg ccgccagcgt gcgtgtcggg ttgcaacacg
       61 tcgctggtgg cgcggtggaa accgccgccg acggcgtggc gcaacgccgc tacacctttg
      121 ccccggctcc agcgccggcg ctgacgctgg cgcccgcgca gggcacctgg aactggcgcg
      181 gccagggcga gctgcacctg cgcgtgcaga acgcgatgcc gtgggcggtg acgctcgatg
      241 tggcggtgga cagcggcacc ggccagcggc tgcgggcgat cgttggcctg ccggccggcc
      301 ccgcgcagac gctggtgctg ccgctcgcgc ccacttcgcc gctggcgttt ggcatgcaga
      361 agggcccagc gcggccgttc gatgccaatg gccagcgcgt gctgctggcc accaccgtgg
      421 ctggccagtt cgacgcggcc gacgtgcatg ccgtgcgcgt gtcgatgccc gcgccgcagg
      481 cgccgcaatc catcctgctg ggccggctcg acaccgtgcc tggcacgccg ctgctgcatg
      541 aggcctacac cggcatcgtc gatcgctacg gccagtacac gcgcgaagca tggccggaga
      601 agatcgccga tgacgccgcg ttgcgcgccg cggtgaagcg gccgccggcc gcggcgacgg
      661 gtatcggcgg ggatcgctac ggcggacgtc tggacgtccg tttgccggcg acgggctggt
      721 tccgcacgca gaagtccggc gggcgctggt ggctggtcac gccggacggc cacggcttct
      781 tctcgctggg cgtggacgcg accacggccg agggcacccg cgcctacgtg cagggccgcg
      841 acgccatgtt ccgcgacctg ccgccggaca gcggcgcgtg ggccgcgttc tacggcacca
      901 gcgacagccg cgatccgcag cgcggtgcgg gcgctggccg ctgctgcgat cacggccgct
      961 ggttcgactt ctacgccgcc aacctgtatc gcgtggatgg cgcgaactgg ttggccgcct
     1021 ggcgcacgcg cacgctggcg cggctcaagg cgtggggttt caacacgctg gccgattgga
     1081 gcgatccggc gctgggcgcg atgcaccagc tgccgtacac gcgcgagctg gatatccgcg
     1141 gcgagttcgg cagcgtcagc accggccgcg acctgtgggg gcgcatgcct gatccgttcg
     1201 acccgcgctt tgcgtcggcg gtggatgcgg cagcggcgga agccgcgcag ggtgtgcgca
     1261 acgacccttg gctgctcggc tatttcgccg gcaacgagct gtcgtgggcg gcgtggagtg
     1321 cggatggccg ctgggcgctg gccatcggca cgctgcgcgg cgaggcgcgc agcgcggcca
     1381 agcaggcgtt cgtcgccggg ctgaagcaga agtacgccac gccgggcaag cttgcagcgg
     1441 cctggggcat cgcactgtcg tcgtggcagg cactggatgc gaccaacttc ccggcgccca
     1501 cgccgaatgc cgcgcatccc gccatcgccg ccgactacag cgcgtggctg agccgctacg
     1561 ccggacagtt cttccgcatc gtcgccacgg ccatccatcg ccacgatccg caccacctct
     1621 accttggcag ccggttcgcg atgaagacgc ccgaggccgt cgcgatgtgc gccaagtact
     1681 gcgacgtggt gagcttcaac gtgtatgccg acctgccgca gcacggctac gacgcggtgg
     1741 cgatgaggaa gctcgacaag ccggtgctga tctcggagtt cagcttcggc tccgacgacc
     1801 gcggcccgtt cggcaatggc gtggtgtcgg tggagaccga ggcgcagcgc ggcgtggcct
     1861 acgcgcgcta cctgcaggcc gcggcgagcg atccggacat cgtcggcacg cactggttcg
     1921 aatacgtgga cgaaccggtg gccggccgcc tgctcgacgg cgagaactcg cacttcgggc
     1981 tggtcggcgt caccgacatt ccgttcgccg gcttcatcga ggcagtgcgc aaggcgaacg
     2041 cggagctgcg gcactgatgc aggtggtgat gatgtcgact ggcggcgcat gcggggtgac
     2101 gaaatgtgtc tgatcgcggt ggcctggcag gttcacccgc gctggcgcct ggtgctggcg
     2161 ggcaaccgcg acgagcagca tgcgcgcccg agcgcgccgc tggcgcgctg ggacgatttg
     2221 ccgatcgtcg ccggccgcga cctcaaggcc ggtggcacct ggctgggcgt gaccgacggc
     2281 gggcgggtga gcgtggtcac caacgtgcgc gatccgcgcg acccgcagct cggccaatcg
     2341 cgcggcctgc tggtcagcga tttcctcgcc ggcgacgacg atgccgcgct gcatgcgcag
     2401 gcgctggccg cgcgcgcggc cgactatcgg ccgttcaacc tgctgacctt cgatgcctac
     2461 gccggctact accttggcaa tcggcccggc gcgcgcatgc aagccgtgac gtcgggcgtg
     2521 cacgcgctct ccaacgccgc gttcgacacg ccgtggccga aaacctgcac gctggccgcc
     2581 cgcgtcgagg agtgggtcgc cgcgggcagc gaagacttcg cgcccttgtt tgcgacgctg
     2641 gccgacgaac gtcccgcgcc ggatgcggag ttgccggata ccggcgtcgg catcgagctg
     2701 gaacgccgct tgtcgccggc cttcatccgc gcgcgcgagt acggcacgcg tgccagcacg
     2761 gtggtggcga tcgaccacgc gggcgcgggc atcatcgtcg agcgccgctt cggcccggat
     2821 ggcgtgccgc tgggcgagag gaccatgcgc ttcggccagg tggattaaag gcgggttggg
     2881 acgcgtgcgt tgggggcagg gccgagagca gtcgggtgtc agcccggcaa ggatgccggc
     2941 gcgaccctca atcgaccacg ccgtcgaggt agtaccagcg gtcgccctcg cgcacgaagc
     3001 ggctggtttc gtgctggcgc tgcgcgctgg cgccgccgag gcggtagcgc gcgacgaatt
     3061 ccaccgtggc gtggtcggcg ccgttcgtgg aggcgtgctt caccgtcagc ccgagccagg
     3121 tcggcgcggg gtgctgggcg gcgaggtcga gcgcggcggg gcgcgtcgag gcgtgccagg
     3181 ttgccagcag gtagtcctcg cggcgcagca cgtaggcggt gtagcgcgaa cgcatcaagg
     3241 cctcggcgct gatggccggg cgcacgccgt cgatcagcgg cgcacaacac gccgcgtagc
     3301 cggcggggtt gccgcacggg cacggcggcg cggctggctt cacgtcgggc gcccgcgcag
     3361 caggcgcgca ggcagcgtca gcacggcgcc gagaaacgcg aacaccgccc ccaccgtgat
     3421 gccgaccagc cgcagcggca ggcagatgag ccacacgatc gggtagagca ccagcgccag
     3481 cagcgcaatc ggccagcaca ggatgaacag cagcagccag agcaggaacg cgaccatcgc
     3541 ggcgtctcgc aggcggagga ggcgccattg tgccgccacg gggcgtggcc gcgcgatcag
     3601 ccggaagtca ccgcgacgac cagcgccacg gcgtccgcgt gcagcacgag ggtgccgtcg
     3661 ccggggcgcc aggcatcgcc cgcaccgagg gtgccgtcgc ggctgtcgat tcgcccgcgt
     3721 gcgcagtaca ccagcgcgac gccatcgccc ggcgtgtggg tgccggcgcc gcgccacacg
     3781 gagatgccgc cgcgcacgcg gccacggcgc agcatcaggt tgaaatcccg ccccggcttg
     3841 ccggccagcg tcatcgccac cggcgtctcg ccggcgaacg cgaacggcgt gcacggcgcg
     3901 gtcagcgagt gctcgcggcc atcgcccagg tgcatggtga agccgtcgcc gtcgagcagc
     3961 gcgatcaccc gatcgacgcc ggggtaggcc gaaaacggcg ccgccgcggt cacctcggcc
     4021 acgctcaccc gccagagaaa atcgtccatg ccggcgccgg gcggatggat ggccaattcg
     4081 cgcgtgcgcc ccagcccgtt tttccacggg cgcggcgggc aatcggcgag atgcaggatg
     4141 ctcatcgttc gatcacccgc tggaacgg
//
LOCUS       DASSVL010000254         2242 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_698128, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000254 DASSVL010000000
VERSION     DASSVL010000254.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2242)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2242)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2242
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_698128"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            70..1164
                     /locus_tag="VFM52_04395"
     CDS             70..1164
                     /locus_tag="VFM52_04395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007807553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0044237 - cellular metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC family protein"
                     /protein_id="HET8764438.1"
                     /translation="MHHDARDGTLVEELNRARALPARYYAGDAMLAIEQRAVFARSWQ
                     LVAHQEQLAEPGDHAVEHIGGVPILLVRGQDGMLRAFPNVCRHRAGPLALCDGKGARA
                     LHCKYHGWTYTLEGQLCSAPEMQGACDFRVEDIRLPPLRVHEWQGLVFVALSDAAPAF
                     EEVYGGIIQRIAPIDLSAMRYLRRDNYDIDCNWKVYVDNFLEGYHLPHVHPGLSRVLD
                     YRAYDTELFAWHSLQSSPLRNSDAIYGTGQAYYYFVYPNVMLNIMPGRMQTNRILPLG
                     PARCRVVFDYYYAQDEGTQARIAADQGFSDDVQQEDIAICEAVQKGLASGCYVPGRLC
                     PKRESGVWHFQNLLRAACAGPAGESARAAP"
     gene            1161..>2242
                     /locus_tag="VFM52_04400"
     CDS             1161..>2242
                     /locus_tag="VFM52_04400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015446949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HET8764439.1"
                     /translation="MIATTRENQTGPRDERKIGFWTCTALVIGNVIGMGIFVLPASLA
                     PYGFNALIGWVIVLAGCLALARVFSHLAHALPAAGGPYGYIRQTLGEPLAYLALWAYW
                     VSMWLTNAALATGVVGYMTVVFPPLGALPPSAFALGLLWAVVAINLFGVRTGGGVQIV
                     TTALKLLPMLAIALLGGWLLLTAPASYAAHPPATPITLGGVTAAATIALFAMLGIESA
                     SVPAARVNDPARTIPRATMTGTVLTAIVYIVVSAVPLLLIRQAELAEANAPFALLMDR
                     FAAAGSGRWLALFVVISGLGALNGWTLLAGELTRTMAGSGVLPAALARNNRHGAPAVA
                     LLVIGALASAMVGMSYSKSLVAAFTFL"
BASE COUNT          330 a          783 c          758 g          371 t
ORIGIN      
        1 cgccgtgcaa tgcgacggct gctgttcatc gaacatcccg cgcttcgcgc attcgcaaaa
       61 gggccagcca tgcaccacga cgctcgcgac ggcactctgg tcgaagaact caaccgtgca
      121 cgcgcgctgc cggcacgcta ctacgccggc gacgcgatgt tggcgatcga gcagcgcgca
      181 gtgttcgcgc gcagctggca actggtggcc caccaggagc agctggccga gccgggcgac
      241 cacgcggtcg agcatatcgg cggcgtgccg atcctgctgg tgcgcgggca ggacggcatg
      301 ctccgcgcct ttcccaacgt gtgccgccat cgcgccggcc cgctggcgct gtgcgacggc
      361 aagggtgcgc gcgccctgca ctgcaagtat cacggctgga cctacacgct ggagggccag
      421 ttgtgcagcg cgccggaaat gcagggcgcc tgcgacttcc gggtcgaaga catccgcctg
      481 ccgccgctgc gtgtgcacga atggcaaggc ctggtattcg tggcattgag cgacgcggca
      541 ccggcgttcg aggaggtcta cggcggcatc atccagcgca tcgcgccgat cgacctgtcg
      601 gcgatgcgct acctgcgccg cgacaactac gacatcgatt gcaattggaa ggtctacgtc
      661 gacaacttcc tcgagggtta ccatctgccg cacgtgcacc ccggcctgtc gcgggtgctc
      721 gactaccgcg cctacgacac agaactgttc gcgtggcatt cgctgcagtc ctcgccgctg
      781 cgcaacagcg acgcgatcta cggcacaggc caggcgtact actacttcgt ctaccccaac
      841 gtgatgctca acatcatgcc ggggcgcatg cagaccaatc gcatcctgcc acttgggcca
      901 gcccgctgcc gcgtggtgtt cgactactac tacgcgcagg acgaaggcac ccaggcgcgc
      961 attgccgccg accagggctt cagcgacgac gtgcaacagg aggacatcgc gatctgcgag
     1021 gcggtgcaga aaggcctggc ctccggctgc tacgtccccg gccggctgtg cccgaagcgc
     1081 gagagcggcg tctggcattt ccagaatctg ctgcgcgcgg cctgtgccgg acccgccgga
     1141 gagtccgcgc gagcggcacc gtgatcgcga ccacgcgcga gaaccaaacc gggccacgcg
     1201 acgaacgcaa aatcggcttc tggacgtgta ctgcgctggt gatcggcaac gtgatcggca
     1261 tgggcatctt cgtgctgccg gcgtcgctcg cgccctatgg cttcaacgcg ctgatcggct
     1321 gggtcatcgt gctggccggc tgcctggcgc tggcgcgggt gttctcgcat ttggctcacg
     1381 cactgcccgc cgcgggcgga ccatacggct atatccgcca gacgctcggc gaaccgctgg
     1441 cctaccttgc actgtgggcc tactgggtgt cgatgtggct caccaacgcc gcgctcgcca
     1501 ccggcgtggt cggctacatg acggtggtgt tcccgccatt gggcgcgctg ccgccgtcgg
     1561 cgttcgcgct gggcctgctg tgggcggtgg tggcgatcaa cctgttcggc gtgcgtaccg
     1621 gcggcggcgt gcagatcgtc accaccgcgc tgaaactgct gccgatgctg gccatcgcgc
     1681 tgctcggtgg ctggctgctg ctgaccgcac cggcgagcta cgccgcgcat ccgcccgcca
     1741 cgccgattac cctgggcggc gtgaccgcgg ccgcgaccat cgcgctgttc gcgatgctcg
     1801 gcatcgagtc ggccagcgtg ccggcggcgc gcgtcaacga cccggcgcgc accatcccgc
     1861 gtgcgaccat gaccgggacc gtgctcaccg cgatcgtcta catcgtcgtc tcggcggtgc
     1921 cgctgctgct gatccgccag gcggaactgg ccgaggcgaa tgcgccgttc gcgctgctga
     1981 tggaccgctt cgccgccgcc ggctccggac gctggctggc gctgttcgtg gtgatcagcg
     2041 ggctgggcgc gctcaacggc tggaccctgc tcgccggcga gctgacccgc accatggccg
     2101 gcagcggcgt gctgccggcg gcgctggcgc gcaacaatcg ccacggcgcg ccggcggtgg
     2161 cgctgctggt aatcggtgcg ctcgcctcgg cgatggtcgg gatgagctac agcaagtcgc
     2221 tggtggccgc attcactttc ct
//
LOCUS       DASSVL010000255         2348 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_924185, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000255 DASSVL010000000
VERSION     DASSVL010000255.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2348)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2348)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2348
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_924185"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..584
                     /locus_tag="VFM52_04405"
     CDS             <1..584
                     /locus_tag="VFM52_04405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008434987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="conjugal transfer protein TrbE"
                     /protein_id="HET8764440.1"
                     /translation="LAVLGYLFARFEERFDGAPTLLILDESWLFLDDPVFAARIRQWL
                     KTLRKKNVSVIFATQSLADIKDSSIAPAIIERCASRIFLPNPQATEPQIRTIYEGFGL
                     NGRQIEIVATAEPKRDYYYQSRLGNRLFDLDLGPIALAFVGASMPQDQRDIDAVLAST
                     ASGGFAAGWLRHRGLDWAADLIPTFSPPSELRP"
     gene            581..1309
                     /gene="trbJ"
                     /locus_tag="VFM52_04410"
     CDS             581..1309
                     /gene="trbJ"
                     /locus_tag="VFM52_04410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003103988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009291 - unidirectional conjugation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="P-type conjugative transfer protein TrbJ"
                     /protein_id="HET8764441.1"
                     /translation="MKKIGLAVVTALLLSVSSTSFAQWAVFDAANYTQNLLTAARELQ
                     QIDNQIQQLQNQATMLVNQGRNLASLPYSALAQLQATLASTNQLIAQAQGLSFNVAQS
                     QAAFNRLYPSSYGAGTSNAQMVQDAQTRWQTSVQALQTATQMQSQAAQNLLADQGVLS
                     GLVTQSQGAVGTLQASQATNQLLALISRQAIQAQQLAVSQNRATALGQARAAADEAQA
                     EQVRTRFIGNGPQYTPQPVDFYGN"
     gene            1319..>2348
                     /gene="trbL"
                     /locus_tag="VFM52_04415"
     CDS             1319..>2348
                     /gene="trbL"
                     /locus_tag="VFM52_04415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008434991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009291 - unidirectional conjugation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="P-type conjugative transfer protein TrbL"
                     /protein_id="HET8764442.1"
                     /translation="MNDLSVIDQFLAVFSRYIDSGFGLLHGEVAYLSATLIVIDMTLA
                     GLFWAMGGEEVLAKLIRKTLYVGAFAYIIGNFNTLAGIVFRSFVGLGLLASGSTVSVG
                     DFLQPGRLAAIGVTAGEPILQQVGTMSHGITAVFSNFDMIVILLFAWAVVVISFFILA
                     IQLFVTLVEFKLTTLAGFVLVPFALWNKTAFLAEKVLGNVVSSGVKVLVLAVIVGIGS
                     TIFGQFQTPAGADPTLNHALALMLASLTMLGLGIFGPGIATGLVSGAPQLGAGAAAGT
                     ALGAAGLAVAGGAAVATGGAAVAAGTRLAARGAVGTARATRGAASAYRAGAAASGATG
                     ARAFGAGMA"
BASE COUNT          368 a          766 c          784 g          430 t
ORIGIN      
        1 tgctcgccgt gctggggtat ctgttcgcgc gcttcgagga acggttcgac ggggcgccga
       61 cgctgctgat cctcgatgag tcctggctgt tcctggacga cccggtgttc gccgcgcgca
      121 tccgccagtg gctcaagacg ctgcgcaaga agaacgtgag cgtgatcttc gccacgcagt
      181 cgctggccga catcaaggat tcgagcatcg cgcccgcgat catcgagagg tgcgcgagcc
      241 gtatcttcct gccgaacccg caggcgaccg agccgcagat ccggacgatc tacgaaggct
      301 ttggcctcaa cggccgacag atcgagatcg tcgccaccgc cgagcccaag cgcgactact
      361 actaccagtc gcgcctcggc aaccgcctgt tcgacctcga cctcgggccg atcgcgctcg
      421 cgttcgtcgg cgcatcgatg ccacaggacc agcgagacat cgatgccgtg ctcgccagca
      481 cggcatcggg cggctttgct gcgggttggc tgcggcaccg cggcctcgac tgggcggccg
      541 acctcattcc aacgttttcc ccgccatcgg agcttcgacc atgaagaaga tcgggctggc
      601 cgtcgtcacg gccttgctgc tgtcggtgtc gtccacgagt tttgcccagt gggcggtgtt
      661 cgacgcggcc aactacaccc agaacctact gactgccgcg cgcgaactgc agcagatcga
      721 caaccagatc cagcagttgc agaaccaggc aacgatgctg gtgaaccagg gccgcaatct
      781 cgcgagcctt ccctacagcg cgctggcgca gttgcaggcg acgctcgcga gtaccaacca
      841 gttgattgcg caggcacaag ggttgtcctt caacgtcgcg cagtcgcagg cggcgttcaa
      901 tcggttgtat cccagttcct acggtgccgg cacttccaat gctcagatgg tgcaggacgc
      961 gcagacgcgc tggcagacct cggtgcaggc gctgcagacc gcgacgcaga tgcaatcgca
     1021 ggcggcacag aacctgctgg cggaccaagg tgtgttgagt ggtctcgtca cgcagagcca
     1081 gggcgcggtc ggtaccctgc aggcaagcca ggccaccaac cagttactcg cgctgatttc
     1141 gcgtcaggcg atccaggccc agcaactcgc ggtgtcgcag aaccgggcca cggcgctggg
     1201 ccaggcgcgg gcggcggccg acgaggcgca ggccgagcag gtccgcacgc gtttcatagg
     1261 caatggcccg caatacacgc cgcagccggt ggacttctac ggaaactgag gcgcggccgt
     1321 gaacgacctg tccgtcatcg accagttcct ggccgtcttc tcgcggtaca tcgactcggg
     1381 cttcgggttg ctgcacggcg aggtcgcgta tctctcggcc acgctgatcg tcatcgacat
     1441 gacgctcgcg ggcctgttct gggcgatggg cggcgaagag gtgctggcga agctgatccg
     1501 caagacgctc tacgtcggtg cgttcgccta catcatcggc aacttcaata cgctggccgg
     1561 cattgtgttt cgctcgtttg tggggctcgg cctgctcgct tcgggttcga ccgtgagcgt
     1621 cggcgacttc ctgcagccgg ggcggctcgc ggcgatcggc gtcaccgccg gtgagccgat
     1681 cctgcagcag gtcggcacga tgtcgcatgg catcacggcg gtcttcagca acttcgacat
     1741 gatcgtgata ctgctgttcg cttgggctgt cgtggtcatc agctttttta tcctggcgat
     1801 acagctgttc gtgacgctgg tggagttcaa gctgaccacg ctcgctggct tcgtgctggt
     1861 gccgttcgca ctctggaaca agaccgcgtt cctcgccgag aaggtgctcg gcaacgtggt
     1921 gtcctcgggc gtcaaagtgc tggtgctcgc cgtgatcgtc ggcatcggct cgacgatctt
     1981 cggacagttc cagacaccgg ctggcgccga tccaacactg aatcacgcac tcgccctcat
     2041 gctggcctcg ctcacgatgc tgggtctggg aatcttcgga ccgggtatcg ctaccggctt
     2101 ggtgtccggg gcgccgcagc ttggtgcggg cgccgccgcc ggtacggcgc ttggcgcggc
     2161 gggccttgcc gttgccggtg gtgccgccgt ggcgaccggc ggtgccgcag tcgcggccgg
     2221 gacgcgcctg gccgctcgtg gcgcggtggg tacggcgcgt gccacccgtg gcgctgcctc
     2281 cgcgtatcgc gcgggggccg ccgcatcagg cgcaaccgga gcgagggcat tcggagcggg
     2341 catggcga
//
LOCUS       DASSVL010000256         3172 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1305182,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000256 DASSVL010000000
VERSION     DASSVL010000256.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3172)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3172)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3172
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1305182"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1722)
                     /locus_tag="VFM52_04420"
     CDS             complement(<1..1722)
                     /locus_tag="VFM52_04420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019465131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase M61"
                     /protein_id="HET8764443.1"
                     /translation="MSFLSQRSLLPARIAATLAVAVAGVVFAGAAWADAADAHVAAPA
                     DTPYPGTIQIHVDATDLTQGIFRVKETIPVKAGELTLLYPTWIPGDHSPSGPIDMLAG
                     LAITANGKPLAWKRDKYDVYAFKVDVPAGVAAIDVSFQYLSGRGADAFVQMTNKMLSL
                     EWNTVSLYPAGHYSRDITFAPSVTLPTGWQFGTALEKVSAAGGDISFKPTTYNTLVDS
                     PIYAGKYFKRVDLDPGAKVAVNLDVVADAPSDLVMTPAEVKAHQNLVTQAYKLFGSHH
                     YNHYDFLFSLSKQLSGNGLEHHQSSEDGAEPDYFTDWAGSAPGRDLLAHEYTHSWNGK
                     FRRPADLWTPNFNVPMGDSLLWVYEGQTQYWGYVLTARAGLWTPEQFRDALAMTAANY
                     DLNRPGFQWRTLEDTTNDPTAAHRAMLPYRSWQMSEEYYSGGQMMWLAADAKIRALTH
                     DQKSLDTFAQDFFGVDDGSFITRTYTFDDIVAALNGVVKYDWAGFLDRYVRQLNPPLQ
                     HGLAASGWKLVYTDQASAYQKQYDAASESPRHIYNFTYSIGLTLTKDGEINDVRWNGP
                     AFKAGIGS"
     gene            complement(1816..2511)
                     /locus_tag="VFM52_04425"
     CDS             complement(1816..2511)
                     /locus_tag="VFM52_04425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014159198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase N-terminal
                     domain-containing protein"
                     /protein_id="HET8764444.1"
                     /translation="MIDLYYWPTPNGHKITLFLEEAGLPYTLKPVNIGAGDQFKPAYL
                     AISPNNKMPAIVDHDPAFGGGPVSVFESGAILVYLAGKTGKCIPADPRGKVACLEWLM
                     WQMGGLGPMTGQHGHFSNYAPEKIPYAMERYRKESMRLLSVLDTRLKGHRFITGDDYT
                     IADMACYPWINPYSKAPLDLAPFAEVRRWQAAIAARPSTLRAYAHDAEVNPKTGTPMS
                     DDEKKILFGQGAR"
     gene            complement(2554..>3172)
                     /locus_tag="VFM52_04430"
     CDS             complement(2554..>3172)
                     /locus_tag="VFM52_04430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007081386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HET8764445.1"
                     /translation="TGMVPYPQLNSAAPVDAAFKALGLDWVRGIINVAAVAGLTSVLF
                     AFMLGAARIWFALSRDGLLPKWFARVHPRYGTPYRPTAILGVFSAVVAGLLPIGEVAE
                     LVNIGTLSAFIVICLSVLVLRLRRPDVPRSFRAPALWLVAPVGMLFSLFLIIGWPWWQ
                     AGHLVLLGGLEHVTLLRFVVWLAIGLAVYFGYGIRHSGLAQHRQP"
BASE COUNT          548 a         1019 c         1071 g          534 t
ORIGIN      
        1 cgaaccgatg ccggccttga acgcggggcc gttccagcgc acgtcgttga tctccccgtc
       61 cttggtcagc gtcaggccga tcgagtaggt gaagttgtag atgtggcgcg gcgattcgga
      121 cgctgcgtcg tactgtttct ggtacgcgct tgcctggtcg gtatagacga gcttccagcc
      181 actggccgcg agcccgtgct gcagcggcgg gttcaactgc ctgacgtagc ggtcgaggaa
      241 gcccgcccag tcgtatttca cgacgccgtt caacgcggcg acgatgtcgt cgaacgtgta
      301 ggtcctggta atgaagctgc cgtcgtccac gccgaagaaa tcctgggcga aggtgtcgag
      361 cgatttctgg tcgtgcgtca gcgcccggat cttcgcgtcc gcggccagcc acatcatctg
      421 cccgcccgag taatactcct cgctcatctg ccagctgcgg taaggcagca tcgcgcggtg
      481 cgccgcggtc ggatcgttgg tggtgtcttc gagcgtgcgc cactggaagc ccggccggtt
      541 caggtcataa ttggccgcgg tcatcgccag cgcgtcgcgg aactgctcgg gcgtccacag
      601 gcccgcgcgc gcggtcagca catagcccca gtattgcgtc tggccctcgt acacccagag
      661 cagcgaatcg cccatcggca cgttgaaatt gggcgtccac aaatccgccg gccggcggaa
      721 cttgccgttc cacgaatgcg tgtactcgtg cgccagaagg tcgcgccccg gcgcgctgcc
      781 ggcccagtcc gtgaagtaat cgggctcggc accatcctcg ctcgactggt ggtgttccag
      841 cccgttgccg gaaagctgct tcgacagcga aaacaggaaa tcgtagtggt tgtaatggtg
      901 cgagccgaac agcttgtacg cctgggtgac gaggttctgg tgcgccttca cctcggcggg
      961 cgtcatcacc agatcgctcg gcgcatcggc gacgacgtcg aggttgaccg ccaccttcgc
     1021 gcccggatcg agatcgaccc gcttgaaata cttgcctgcg tagatcggcg aatcaaccag
     1081 cgtgttgtaa gtcgtcggct tgaagctgat gtcgccgccc gccgcggaca ctttttcgag
     1141 cgcggtgccg aactgccagc cggtcggcag cgtcacgctc ggcgcaaagg tgatgtcgcg
     1201 cgaatagtgc ccggccggat acagcgacac ggtgttccat tccagcgaca gcatcttgtt
     1261 ggtcatctgc acgaaggcat ccgcgccgcg ccccgagagg tactggaagc tgacatcgat
     1321 ggcggcgacg ccggccggca catcgacctt gaatgcgtac acgtcgtact tgtcgcgctt
     1381 ccacgcgagc ggcttgccgt tggcggtgat cgcaaggccc gccagcatgt cgatcggccc
     1441 cgatggcgag tggtcgcccg gaatccacgt cgggtacagc agggtcagct cgccggcctt
     1501 gaccgggatc gtctccttga cgcggaagat gccctgggtg aggtcggtcg catcgacgtg
     1561 gatctggatg gtgcccggat acggcgtatc ggccggcgct gcgacgtgcg catcggcggc
     1621 atcggcccat gcggcgccgg caaacacgac gcccgccacg gcgacggcca gggtggccgc
     1681 gatgcgggca ggcaacaacg aacgctgcga caggaatgac atgcgggatt tccggcagga
     1741 atgatccccg cgaacgtagc accgcgccat ccgccgcgca taggccggac ggcaggggtg
     1801 acgccgaagc gtgacctagc gcgcgccctg cccgaacagg attttcttct cgtcgtccga
     1861 catcggcgtg ccggtcttgg gattcacttc ggcatcgtgc gcgtaggcac gcagcgttga
     1921 cgggcgcgcc gcgatcgcgg cctgccagcg gcgcacttcg gcgaagggcg ccaggtcgag
     1981 cggtgccttc gaatacggat tgatccacgg gtagcacgcc atgtcggcga tggtgtagtc
     2041 atcgccggtg atgaaccggt ggcccttcaa gcgcgtgtcg agcacgctca gcaggcgcat
     2101 cgattccttg cggtagcgct ccatcgcgta cggaattttt tcgggcgcgt agttgctgaa
     2161 gtggccgtgc tggccggtca tggggcccag gccgcccatc tgccacatca gccattcgag
     2221 gcaggcgacc ttgccgcgcg ggtcggccgg aatgcatttg ccggtcttgc cggcgaggta
     2281 caccaggatc gcgcccgatt cgaacacgct taccgggccg ccgccgaacg ccgggtcgtg
     2341 atcgacgatc gccggcatct tgttgttggg cgaaatcgcg aggtacgcgg gcttgaactg
     2401 gtcgcccgcg ccgatgttca cgggtttcag ggtgtagggc agtccggctt cttcgaggaa
     2461 cagcgtgatc ttgtggccgt tgggggtggg ccagtagtag aggtcaatca tgtttggatg
     2521 gccaaacgga aagcccaagt ctagccccgc gcgtcagggc tggcggtgct gcgccaagcc
     2581 gctgtgccgg atgccgtagc cgaaatacac ggcaaggccg atcgccagcc acactacgaa
     2641 gcgcagcagc gtgacgtgct ccagcccgcc gagcagcacc aggtggccgg cctgccacca
     2701 cggccagccg atgatcagga acagcgaaaa cagcatgccg acgggggcga ccagccacag
     2761 cgccggcgcg cggaagctgc gcggcacgtc gggccggcgc aggcgcagga ccagcaccga
     2821 caggcagatc acgatgaacg ccgacagggt gccgatgttg acgagctcgg cgacttcgcc
     2881 gatcggcagc aggcccgcga ccaccgcgct gaagacgccg aggatcgcgg tcgggcggta
     2941 cggcgtgccg tagcgcggat gcacccgcgc aaaccatttc ggcaacaggc catcgcgcga
     3001 cagcgcaaac cagatccgcg ccgcgcccag catgaaggcg aacaatacgc tggtgagccc
     3061 cgcgacggcg gcgacgttga tgatgccgcg cacccagtcg aggcccagcg ccttgaacgc
     3121 ggcgtccacc ggcgccgccg aattcagttg cgggtacggc accatgccgg tc
//
LOCUS       DASSVL010000257         2134 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1319520,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000257 DASSVL010000000
VERSION     DASSVL010000257.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2134)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2134)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2134
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1319520"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..568
                     /gene="folK"
                     /locus_tag="VFM52_04435"
     CDS             <1..568
                     /gene="folK"
                     /locus_tag="VFM52_04435"
                     /EC_number="2.7.6.3"
                     /inference="COORDINATES: protein motif:HMM:TIGR01498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003848 -
                     2-amino-4-hydroxy-6-hydroxymethyldihydropteridine
                     diphosphokinase activity [Evidence IEA];
                     GO_process: GO:0009396 - folic acid-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="2-amino-4-hydroxy-6-
                     hydroxymethyldihydropteridine diphosphokinase"
                     /protein_id="HET8764446.1"
                     /translation="AALAARLAALPGGMQRRRATDRKPRPRSRAYLSLGSNLEPEANL
                     AAAIAALRARFGDVVVSPVYRSPADGFRGPDFLNAIVGVDSDIHPFALDEWIHALEEA
                     HGRDARDADYSNRPLDIDIIYFGELVLDGPGDFQLPRPELHHAFVLKPLADIAPDFVD
                     PIRKQSLAQLWAAHPRHDDPPARVDVVL"
     gene            573..1280
                     /locus_tag="VFM52_04440"
     CDS             573..1280
                     /locus_tag="VFM52_04440"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HET8764447.1"
                     /translation="MTAKPVSVVVTGASRGIGLAIAQRFHADGAQVTICARGEAALEE
                     ARDAMPGLRAHACDLAVRAEVERFADTVLAESGTPDALVNNAGAFLPGGISSEAEGTF
                     DAMVAINVASAYHLTRALLPGMIARGSGTILNICSTASITPYPNGGSYGIAKHALLGF
                     SRTLREEMKPHGIRVVALLPGATLTDSWAGAGLPYSRFMPAEDVAEAAFMAWRMSPRT
                     VVEDILMRPMLGDIPSD"
     gene            1292..1789
                     /locus_tag="VFM52_04445"
     CDS             1292..1789
                     /locus_tag="VFM52_04445"
                     /inference="COORDINATES: protein motif:HMM:NF013411.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-carboxytetrahydropterin synthase"
                     /protein_id="HET8764448.1"
                     /translation="MPGQTVTLRLAKENMKFSAGHFTIFGPGERERVHGHDFRVAVRV
                     QARVGDNGLCFDYGLLKRRIVELCRELNEWMLLPGESPLLRIERDGALLHAVFGAERI
                     PFLAADVQVLPLANISVEELARYFLGRLLEDRAQVDAFRIDALDVEVASGPGQGATVS
                     WQRAG"
     gene            1813..>2134
                     /locus_tag="VFM52_04450"
     CDS             1813..>2134
                     /locus_tag="VFM52_04450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007806809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6159 family protein"
                     /protein_id="HET8764449.1"
                     /translation="MGKFARSWALAKASMDVLRADKELLVFPLVSSIVTLVVAASFLL
                     PVALALIGHHGGDFDGRRFAPGYYAVLFAFYLVQYFVIFFFNTALVGAAMIRLDGGDP
                     TVGAG"
BASE COUNT          296 a          762 c          751 g          325 t
ORIGIN      
        1 cgcggccctc gcggcgcgcc tggccgcgtt gcccggcggc atgcagcgcc gtcgagccac
       61 cgaccgcaag ccgcggccgc gcagccgcgc gtacctgagc ctgggcagca acctcgagcc
      121 ggaggccaac ctcgccgccg cgatcgccgc gctgcgcgcg cgcttcggcg acgtcgtggt
      181 gtcgccggtc taccgctcgc cggccgacgg cttccgcggc ccggatttcc tcaacgcgat
      241 cgtcggcgtc gacagcgata tccatccgtt cgcgctcgac gaatggatcc acgcgctgga
      301 agaagcgcac ggccgcgacg cgcgcgacgc cgactacagc aaccggccgc tggacatcga
      361 catcatctat ttcggcgagc tcgtcctcga cgggccgggc gatttccagc tgccgcggcc
      421 cgagctgcac cacgcgttcg tgctgaagcc gctggccgac atcgccccgg atttcgtcga
      481 cccgatccgc aagcagtcgc tcgcccagct gtgggcggcg catccgcgtc acgacgaccc
      541 gccggcgcgg gtcgatgtcg tactctagcg gcatgactgc aaagccggtg tccgtcgtcg
      601 tcacgggtgc atcgcgcggc atcggcctcg cgatcgcgca gcgcttccat gcggacggcg
      661 cgcaggtgac catctgcgcc cgcggcgagg cggcgctgga agaggcgcgc gacgccatgc
      721 ccggcctgcg cgcgcacgcc tgcgacctgg ccgtgcgcgc cgaggtcgag cgcttcgccg
      781 acacggtgct cgccgagagc ggcacgcccg acgcgctggt gaacaacgcc ggcgcgttcc
      841 tgcccggcgg catctccagc gaggccgagg gcacgttcga cgcgatggtc gcgatcaacg
      901 tcgccagcgc ctaccacctg acgcgcgcgc tgctgccggg catgatcgct cgcggcagcg
      961 gcaccatcct caacatctgc agcaccgcct cgatcacgcc gtatcccaac ggcggctcgt
     1021 acggcatcgc caagcacgcg ctgctcggct tctcgcgcac gctgcgcgag gagatgaagc
     1081 cgcacggcat ccgcgtggtg gcgttgctgc cgggcgccac gctcaccgac tcgtgggccg
     1141 gcgccgggct gccgtattcg cgcttcatgc cggccgagga cgtcgccgag gcggcgttca
     1201 tggcctggcg gatgtcgccg cgcaccgtgg tcgaggacat cctgatgcgg ccgatgctcg
     1261 gcgacatccc ttcggactga cggaacgacg catgcccgga cagaccgtca ccctgcgcct
     1321 ggccaaggag aacatgaagt tctccgcggg ccatttcacc atcttcgggc cgggcgagcg
     1381 cgaacgcgtg cacggccacg acttccgggt cgcggtgcgc gtgcaggcgc gcgtcggcga
     1441 caacggcctg tgcttcgact acgggctgct gaagcgccgg atcgtcgaac tgtgccgcga
     1501 gctcaacgag tggatgctgc tgcctggcga atcgccgctg ctgcgcatcg agcgcgacgg
     1561 cgcgctgctg cacgcggtgt tcggcgcgga gcgcatcccg ttcctcgccg ccgacgtgca
     1621 ggtgctgccg ctggcgaaca tcagcgtcga ggaactggcg cggtatttcc tcgggcgcct
     1681 gctcgaggac cgcgcgcagg tcgacgcctt ccgcatcgac gcgctggacg tggaagtcgc
     1741 ctcgggccca ggccagggcg ccacggtgtc gtggcaacgg gccggctgac ggatcaacag
     1801 gggagaagaa cgatgggaaa gttcgcgcgt agctgggcgc tggcgaaggc gagcatggac
     1861 gtgctgcgcg ccgacaagga actgctggtg ttcccgctgg tctccagcat cgtcacgctg
     1921 gtggtggcgg cgagtttcct gctgccggtg gcgctggcgc tgatcggcca ccacggcggc
     1981 gacttcgatg gccgccgttt cgcgcccggg tactacgcgg tgctgttcgc gttctacctg
     2041 gtgcagtact tcgtgatctt cttcttcaac acggcgctgg tgggcgcggc gatgatccgg
     2101 ctcgacggcg gcgatccgac ggtcggcgcg gggc
//
LOCUS       DASSVL010000258         2175 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_768685, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000258 DASSVL010000000
VERSION     DASSVL010000258.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2175)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2175)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2175
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_768685"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1176
                     /gene="fliI"
                     /locus_tag="VFM52_04455"
     CDS             <1..1176
                     /gene="fliI"
                     /locus_tag="VFM52_04455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008434177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009288 - bacterial-type flagellum
                     [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar protein export ATPase FliI"
                     /protein_id="HET8764450.1"
                     /translation="GATLETEVVGFADERLLLMPVGDMHGVLPNARVRPCARSGGLPV
                     GAGLLGRVIGADGVPLDGHGPLESDEQAALKAEPINPMARKPIDTPLDTGVRAINALL
                     TVGRGQRLGLFAGSGVGKSTLLGMMTKYTNADVVVVGLIGERGREVKEFVEHTLGEEG
                     RRRAVIVAAPADAPPLKRLRGAQYATAIAEWFRDRGQRVLLLMDSLTRYAQAQREIAL
                     AIGEPPATKGYPPSVFAMMPALVERAGNDADGKGSITAFYTVLTEGDDYRHDPIADAA
                     RAILDGHIVLSRDLAEAGHYPAIDIEASISRVMPAVATREHMRSAQRFRQVYSAYRQQ
                     RDLIAVGAYQKGSDPQVDQAIEMWPQLRAFLQQEVDEPITLDQAIERLAALAEQVHE"
     gene            1173..1595
                     /gene="fliJ"
                     /locus_tag="VFM52_04460"
     CDS             1173..1595
                     /gene="fliJ"
                     /locus_tag="VFM52_04460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007080077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009288 - bacterial-type flagellum
                     [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0003774 - cytoskeletal motor activity
                     [Evidence IEA];
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA];
                     GO_process: GO:0071973 - bacterial-type
                     flagellum-dependent cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar export protein FliJ"
                     /protein_id="HET8764451.1"
                     /translation="MSSRAERLQPAVDQARQRSEDALARFAAQQQQLARAEHQLSELH
                     RYRDEYANGGDAASSVSAMLNRQAFIQRIDQAITQQVAEVARQQRQLELVRADWTHSH
                     ARESALDSVVAHHVENERRAEERREQAELDERFQHRRP"
     gene            1678..>2175
                     /locus_tag="VFM52_04465"
     CDS             1678..>2175
                     /locus_tag="VFM52_04465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8764452.1"
                     /translation="MTATHVGSLSASTVAAKTAANTGTPESPGTAPFHQRLQDARGQG
                     SSPARDAHDARPQRGPDPGRDRRDDPSPKGPDAQLSSAAARLDTSRDAVTPPPAADAT
                     APTLPVAAPPPPPPPKAIADVATVEPAGGKDDDTDTGATALVEAMLALIAPAPVHPAA
                     PAGSVA"
BASE COUNT          334 a          823 c          745 g          273 t
ORIGIN      
        1 ggcgccacgc tggagaccga ggtggtcggc ttcgccgacg agcgcctgct gctgatgccg
       61 gtcggcgaca tgcacggcgt gctgccgaat gcgcgggtac gcccgtgcgc gcgcagcggc
      121 ggcttgccgg tgggcgcggg cctgctcggc cgcgtgatcg gcgccgacgg cgtgccgctg
      181 gacgggcacg gtccgctgga atcggacgag caggccgcgc tcaaggccga gccgatcaac
      241 ccgatggcgc gcaagccgat cgacaccccg ctggacaccg gcgtgcgcgc gatcaatgcg
      301 ctgcttaccg tcggccgtgg ccagcgcctg ggcctgttcg ccggctccgg cgtgggcaag
      361 tccaccctgc tcggcatgat gaccaaatac accaacgccg acgtggtggt ggtggggctg
      421 atcggcgaac gcggccgcga agtgaaggag ttcgtcgaac acacgctggg cgaggagggc
      481 cgccgccgcg cggtgatcgt cgccgcgccg gccgacgcgc cgccgctcaa gcgcctgcgc
      541 ggcgcgcagt acgccaccgc gatcgccgag tggttccgcg accgcggcca gcgcgtgctg
      601 ctgctgatgg attcgctcac ccgctacgcc caggcgcagc gcgagatcgc gctggcgatc
      661 ggcgagccac cggcgaccaa gggttatccg ccgtcggtgt tcgcgatgat gccggcgctg
      721 gtcgagcgtg ccggcaacga tgccgacggc aagggttcga tcaccgcgtt ctacaccgtg
      781 ctcaccgagg gcgacgacta tcgccacgac ccgatcgccg atgcagcgcg cgcgatcctg
      841 gacggccata tcgtgctctc gcgcgacctc gccgaggccg gccattaccc ggccatcgac
      901 atcgaggcgt cgatcagccg cgtgatgccg gcagtcgcca cgcgcgagca catgcgcagc
      961 gcgcagcgct tccgccaggt ctattccgcc tatcgccagc aacgcgacct gatcgcggtg
     1021 ggcgcctacc agaagggctc cgacccgcag gtggaccagg ccatcgagat gtggccgcag
     1081 ctgcgtgcgt tcctgcagca ggaagtggac gaaccgatca ccctcgacca ggccatcgaa
     1141 cgcctggccg cgctggccga acaggtgcat gaatgagttc ccgcgccgaa cgattgcagc
     1201 cggccgtgga ccaggcccgc cagcgcagcg aggatgcgct ggcccgtttc gccgcgcagc
     1261 agcagcaact ggcgcgcgcc gaacaccagc tgagcgaact gcatcgctat cgcgacgaat
     1321 acgccaacgg cggcgacgcc gcctccagcg tcagcgccat gctcaaccgg caggccttca
     1381 tccagcgcat cgaccaggcg atcacccagc aggtggccga ggtcgcccgc cagcagcgcc
     1441 agctggagct ggtgcgcgcg gactggaccc acagccacgc ccgcgagagc gcgctggaca
     1501 gcgtggtcgc ccatcacgtc gagaacgagc gccgcgccga ggaacgccgc gagcaggccg
     1561 agctcgacga acgtttccag caccggcggc cgtgatgcgt cgcgcccgcc gatcccgcct
     1621 cggccacgta cctgcgtctc cgcgcggccg tgttgtcccg ccaggagcct tcatgccatg
     1681 actgccaccc acgtcggatc gttgtccgct tccacggtcg ccgcgaagac ggctgcgaac
     1741 acgggtacgc cggagtcgcc gggcacggca ccgttccacc agcgcctgca ggacgcgcgc
     1801 gggcagggca gttcccccgc ccgcgatgcg cacgatgcgc gcccgcagcg cggcccggac
     1861 ccggggcgcg accgtcgcga cgatccctcg ccgaaggggc cggacgcgca gctgtcgtcc
     1921 gccgccgctc gcctggatac atcgcgcgac gctgtcacgc cgccgccggc tgccgacgcc
     1981 accgctccca cgctgccggt cgccgcgccg ccgccaccgc caccgcccaa ggcgattgcc
     2041 gacgtggcca ccgtcgaacc cgccggtggc aaggacgacg acaccgatac gggcgccact
     2101 gccctggtcg aagcgatgct tgccttgatc gctcccgcgc cagtccatcc cgccgcacct
     2161 gccggcagcg tcgcg
//
LOCUS       DASSVL010000259         2056 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1093754,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000259 DASSVL010000000
VERSION     DASSVL010000259.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2056)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2056)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2056
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1093754"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            46..813
                     /gene="gloB"
                     /locus_tag="VFM52_04470"
     CDS             46..813
                     /gene="gloB"
                     /locus_tag="VFM52_04470"
                     /EC_number="3.1.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015448009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004416 - hydroxyacylglutathione hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0019243 - methylglyoxal catabolic process
                     to D-lactate via S-lactoyl-glutathione [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyacylglutathione hydrolase"
                     /protein_id="HET8764453.1"
                     /translation="MHLLPLPALADNYIWLLHDDSGQVVAVDPGEAAPVELALAAHGW
                     RLRAILVTHHHDDHIGGVAALRASHDVPVYAPADARITCATTRVGDRDHVRLSAPHAD
                     FEVIAVPGHTRSHVAYYGAGVLFAGDTLFSLGCGRLFEGSPAQMLASLDRLAALPGDT
                     QLCCAHEYTVANGHFARTVEPDNTALAARLAEVDRLRRDRHPSLPVPLASELASNPFL
                     RTDAPAVIDWCRRKNHPLADRTARFACLRAAKDVFRA"
     gene            810..2048
                     /locus_tag="VFM52_04475"
     CDS             810..2048
                     /locus_tag="VFM52_04475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007082747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase SLT domain-containing protein"
                     /protein_id="HET8764454.1"
                     /translation="MTPSRYPLRLLPLALSAVLAACASTPPQRAPATSPAPLVVTPTP
                     APETPALADEPEPDAGNVWDRLRNSFAMPDCNADPAVLAWAHRYTRNPQRFEAEVRAA
                     LPKLTYVQQVAAKHDVAGEFVLLPWIESGFRPIPGRHGRPAGMWQIMPATASAMGLRV
                     NSRYDARLDVQSAAEAVMKLLNRYHDQFGDWRVAAYAYNAGEAKAQQLVQRHGNPPDM
                     PVIPRWPVRDVTREHLTRLLAMACIVREPERFHVSLPTLAPAQHLVSVPLPHSMPLAI
                     AADHAGMSLDHLKELNAGFRNDVADRSVASYLVMPEGHAQRFRTMLVDQSASATADLR
                     QGNVLADAPAPLPDAATIAPRRATAIPKKARTHRVKAGETLWQLARNYSVSVSDLRRW
                     NHLQGASLRTGQVLKVASSH"
BASE COUNT          323 a          758 c          657 g          318 t
ORIGIN      
        1 ggcgtcgagc gtggcgccgg gtatccacca ccgacggagc atgccgtgca tctcttgccg
       61 ctaccggcac ttgccgacaa ttacatctgg ctgctgcatg acgacagcgg ccaggtggtg
      121 gcggtcgacc cgggcgaagc ggcacccgtc gagctggcgc tcgccgccca cggctggcga
      181 ctgcgggcga tcctggtcac gcaccatcac gacgatcaca tcggcggcgt ggctgcactg
      241 cgcgccagcc acgacgtccc ggtctacgcc ccggccgatg cccgcatcac ctgcgccacg
      301 acccgcgtcg gcgaccgcga ccatgtgcgg ctgtccgcgc cgcacgccga ctttgaggtc
      361 atcgcggtcc caggacacac ccgcagccac gtcgcctatt acggcgcagg cgtgctgttc
      421 gcgggcgaca cgctgttcag cctgggctgc gggcgcctct tcgagggatc gccggcgcag
      481 atgctggcgt cactcgaccg gcttgccgcg ctgccgggcg acacgcagtt gtgctgcgca
      541 cacgaataca ccgtcgccaa tgggcacttc gcccgcacgg tcgagccgga caacaccgcg
      601 ctggccgcac gtctcgccga agtcgaccgg ctgcgccgcg accgccaccc cagcctgccg
      661 gtaccgctgg ccagcgagct ggccagcaac cccttcctgc gtaccgatgc accagccgtc
      721 atcgactggt gtcgccgaaa aaaccacccg ctcgcggatc gcactgcacg cttcgcgtgc
      781 ctgcgcgccg caaaggatgt ctttcgcgca tgaccccttc ccgttatccg ttgcgcctgc
      841 tgccactggc gttgtcggcc gtgctcgctg cctgtgccag cacgccgccg cagcgggctc
      901 ccgccacctc gccagcgccg ttggtcgtca ctccgacgcc ggcgccggaa acgccagcgc
      961 tcgccgatga gcccgagccg gacgccggca atgtctggga ccgcctgcgc aacagcttcg
     1021 cgatgccgga ctgcaacgcc gacccggcgg tacttgcatg ggcgcaccgc tacacccgca
     1081 acccgcagcg cttcgaggcg gaggtgcggg cggccctgcc gaaactcacc tacgtgcagc
     1141 aggtggccgc caagcatgat gtcgccggcg aattcgtgct gctgccatgg atcgagagcg
     1201 gtttccggcc gattcccggc cgccatggcc ggccggctgg catgtggcag atcatgcccg
     1261 ccacggcgag cgccatggga ctgcgcgtga actcacgcta cgacgcgcgg ctcgacgtgc
     1321 aatcggccgc cgaagccgtg atgaaactgc tcaaccgcta tcacgaccag ttcggtgatt
     1381 ggcgcgtcgc ggcgtatgcg tacaacgccg gcgaggccaa ggcgcagcaa ttggtgcagc
     1441 ggcatggcaa tccgccggac atgccggtga tcccgcgctg gccggtgcgt gacgtcaccc
     1501 gcgagcattt gacgcggctg ctggcgatgg cgtgcatcgt gcgcgagccg gaacgcttcc
     1561 atgtcagcct gcccacgctg gctccggcgc aacacctggt ctccgtaccg ttgccgcact
     1621 cgatgccgct ggccatcgcg gccgatcacg ccggcatgtc gctggaccac ctgaaggaac
     1681 tcaacgccgg tttccgcaac gatgttgccg accgcagcgt tgcctcctac ctggtcatgc
     1741 cggaaggcca tgcgcagcgg ttccgcacca tgctggttga tcaatcggcg agtgccacag
     1801 ccgatctgcg gcagggcaac gtcctggccg acgcgccggc tcctcttccg gatgccgcca
     1861 cgatcgcccc ccgacgtgcc accgccatac cgaagaaagc ccgcacccat cgcgtcaagg
     1921 ctggcgagac gctgtggcag ttggcacgca actattcggt gagcgtgagc gacctgcgcc
     1981 gttggaacca cttgcaaggc gcatcgttga ggaccggcca ggtgttgaag gtcgccagct
     2041 cccactgagt gcgcga
//
LOCUS       DASSVL010000260         2401 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_966272, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000260 DASSVL010000000
VERSION     DASSVL010000260.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2401)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2401)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2401
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_966272"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..414
                     /locus_tag="VFM52_04480"
     CDS             <1..414
                     /locus_tag="VFM52_04480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8764455.1"
                     /translation="LDHGFDGDDVHPLARTLVSDEGRDPLAELLDAEAPRQEPPDDDR
                     LPLSLALAWALLLRRHDQRMGTVAARLLISVSHAYHCCAKARWLAAHQHAMPLEPAPR
                     RGTPQLGAWRRQRTIRIPRQLAFNFDDGLDLADSP"
     gene            complement(454..1638)
                     /locus_tag="VFM52_04485"
     CDS             complement(454..1638)
                     /locus_tag="VFM52_04485"
                     /inference="COORDINATES: protein motif:HMM:NF021498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Wadjet anti-phage system protein JetD
                     domain-containing protein"
                     /protein_id="HET8764456.1"
                     /translation="MSHARPVLERLLRRAENARRRGVDERVSQPMAGVGEYTTSLASL
                     PELEAFHAEIALAERAGAIAVQRDVHRGDGAKLLRLTVADLSALARHLGTTLLDERVA
                     AAAQRLAPWRARFPVLDDALAAWREGRKLRGHGPEAAEELADAAHAVTVCADDAGHER
                     ILRRESVRLFGDSKRLEKLTPWLELLVTGELAASGLAKEEVWSSIGLRREPQPLLLAG
                     RGTLTLTDATLPLVRPFLGVPVESLQAVASTARCVLSIENLASFHDAARANGAADVLL
                     LYTGGMPSPAWRAAYVRVLCSLAPEVPVFHWGDIDEGGFRIAATLTAAAREAGRTLQP
                     WLMSPAALPADALRDAEAPAPALLAAMRHWAGRAGWPQVADALARQPVRLEQERLDPV
                     MP"
     gene            complement(1635..>2401)
                     /locus_tag="VFM52_04490"
     CDS             complement(1635..>2401)
                     /locus_tag="VFM52_04490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013536143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="SbcC/MukB-like Walker B domain-containing
                     protein"
                     /protein_id="HET8764457.1"
                     /translation="VASTLHDNFDRLRTQINTLNRTLRASPAFSNNERYQFHHEVAPE
                     YRELHRFIQRVVEVGGDDNLFDSAGEVPAAFRELIEDNAAQRGAASPLDDYRRFFHFE
                     VQIRHDDKVIGSLSERMRSGSGGEHRAPLYVIAGAALAAAYGKSEAHPGGIGVILLDE
                     FGDKIDAQNARATVDYLRSLGLQLILAAPDTAQGALSGVLDSYIELFRDGSLLQAMRM
                     EIQPAARELLLSDQFDLHPELLAEEAARIAREQGAT"
BASE COUNT          338 a          874 c          841 g          348 t
ORIGIN      
        1 ctggatcacg gcttcgacgg cgacgacgtg cacccgctgg cgcgtaccct ggtcagcgac
       61 gagggccgcg atccgctggc cgagctgctg gatgccgagg cgccgcggca ggaaccgccc
      121 gatgacgatc gcctgccgct ctcgctggcg ctggcctggg cgctgctgtt gcgccggcac
      181 gaccagcgca tgggcacagt cgcggcgcgg ttgctgattt ctgtctcgca tgcgtaccac
      241 tgctgcgcca aggcacgttg gctcgccgcc caccagcacg ccatgccgct ggagccggcg
      301 ccacgccgcg gcacgccgca acttggcgcg tggcggcgcc aacgcacgat acgcatcccg
      361 cggcaactcg cgttcaactt tgacgacggg ctggatcttg ccgactcgcc ctgaccgccg
      421 gactggcgat gccgtcgaac gggcgcgcgt tcctcacggc atgacggggt cgagcctttc
      481 ctgctccagg cgcaccggct gccgcgccag cgcgtccgcc acctgcggcc agccggcgcg
      541 cccggcccag tgccgcatgg cggcgagcag cgcgggtgcg ggtgcttccg catcgcgcag
      601 ggcgtcggca ggcaacgccg cgggcgacat caaccaaggc tgcagcgtgc gccctgcttc
      661 gcgcgccgcg gcggttaacg tggcggcgat gcggaagccg ccctcgtcga tatcgcccca
      721 gtggaagacc ggcacctccg gcgccagcga acaaaggacg cgcacataag ccgcgcgcca
      781 cgccggcgag ggcatgccgc cggtgtagag caacagcacg tcggcggcac cgttcgctcg
      841 cgccgcatcg tggaagctgg cgaggttctc gatgctgagc acgcaacgcg ccgtgctggc
      901 caccgcttgc agcgattcga cgggcacgcc gaggaaagga cgcaccagcg gcagcgtggc
      961 gtcggtcaac gtcagcgtgc cacgcccagc cagcagcaac ggttgcggct cgcggcgcaa
     1021 gccgatggac gaccacacct cctccttcgc gaggccgctg gcggccagtt cgccggtgac
     1081 tagcagttcc agccacggcg tgagcttttc cagccgcttg ctgtcgccga acaggcgcac
     1141 gctttcgcgg cgcaggatgc gttcgtggcc cgcgtcgtcc gcgcacaccg tcacggcatg
     1201 cgccgcatct gccagctcct cggcggcttc ggggccgtgg ccgcgcagct ttcggccctc
     1261 gcgccacgcg gccagcgcgt cgtccagcac cgggaaacgg gcacgccacg gcgccagccg
     1321 ctgcgccgcg gccgccacgc gctcgtccag cagggtcgtg cccagatggc gcgccagcgc
     1381 ggacaggtcg gccaccgtga ggcgcagcag cttcgcgccg tcgccgcgat gcacgtcgcg
     1441 ctgcacggcg atggcgccgg cacgctcggc cagcgcaatc tcagcatgga aggcttccag
     1501 ttcgggcagc gacgcgagac tggtggtgta ttcgcccacg cccgccatcg gctgcgacac
     1561 gcgctcgtcc acgccgcgcc gccttgcgtt ctcggcgcgg cgcagcaggc gttccagcac
     1621 cggccgcgcg tggctcacgt ggcgccctgc tcgcgggcga tgcgcgcggc ttcctcggcc
     1681 agcagttcgg gatgcaaatc gaactggtcg ctgagcagca gctcgcgcgc ggccggctgt
     1741 atctccatgc gcatggcctg caacaggctg ccatcgcgga acagctcgat gtagctgtcc
     1801 agcacgcccg acagcgcgcc ctgcgcggtg tcgggcgcgg ccagtatcaa ttgcaggccc
     1861 agcgagcgca ggtagtccac ggtggcgcgc gcgttctgcg cgtcgatctt gtcgccgaac
     1921 tcgtcgagca ggatcacgcc gatgccgccg ggatgcgcct cgctcttgcc ataggccgcg
     1981 gccagcgcgg cgccggcaat cacgtacagc ggcgcacggt gctcgccgcc ggaaccggag
     2041 cgcatgcgct cgctgagcga gccgatcacc ttgtcgtcat ggcgaatctg cacctcgaag
     2101 tggaagaagc ggcggtagtc gtccagcggc gaggcggcgc cgcgctgcgc cgcgttgtcc
     2161 tcgatcagct cgcggaacgc ggccggcacc tcgcccgcgc tgtcgaacag gttgtcgtcg
     2221 ccgcccacct ccaccacgcg ctggatgaag cggtgcagct cgcggtattc cggcgccacc
     2281 tcgtggtgga actggtagcg ctcgttgttg gagaacgcgg ggctcgcacg cagcgtgcgg
     2341 ttgagcgtgt tgatttgcgt gcgcaggcgg tcgaagttgt cgtgcagcgt gctggccacg
     2401 t
//
LOCUS       DASSVL010000261         3166 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1023551,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000261 DASSVL010000000
VERSION     DASSVL010000261.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3166)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3166)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3166
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1023551"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..514
                     /locus_tag="VFM52_04495"
     CDS             <1..514
                     /locus_tag="VFM52_04495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015447113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit beta"
                     /protein_id="HET8764458.1"
                     /translation="WGGEPARWSLHADGLPAWLHPGRGARVARDGQTAGYFGTLHPQL
                     AKALDLGPDVQVLELALEPLLARRLPLAEPVARFPSVRRDLAVEVPEAVTWAQAGEVV
                     RRTLGGVLKELRLFDCYRGKGVEPGRKSLAMGLILQEPSRTLTDADADGCVQQAIAAL
                     EQACKAKLRG"
     gene            516..815
                     /gene="ihfA"
                     /locus_tag="VFM52_04500"
     CDS             516..815
                     /gene="ihfA"
                     /locus_tag="VFM52_04500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002811076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA];
                     GO_process: GO:0006417 - regulation of translation
                     [Evidence IEA];
                     GO_process: GO:0075713 - establishment of integrated
                     proviral latency [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="integration host factor subunit alpha"
                     /protein_id="HET8764459.1"
                     /translation="MALTKADMAERLFVDVGLNKREAKEFVDACFEVVREALENGEQV
                     KLSGFGNFDLREKNQRPGRNPKTGEEIPISARRVVTFRPGQKLKVRVEGYAGSGE"
     gene            796..1152
                     /locus_tag="VFM52_04505"
     CDS             796..1152
                     /locus_tag="VFM52_04505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019182707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HET8764460.1"
                     /translation="MLDQGNNTELPPIPAKRYFTIGEVGELCGVKPHVLRYWEQEFPA
                     LNPVKRRGNRRYYQRHDVLMIRQIRALLYDEGFTITGARARLEGPQARVEASMSHQIV
                     RQVRMELEEVLSLLRR"
     gene            1216..1292
                     /locus_tag="VFM52_04510"
     tRNA            1216..1292
                     /locus_tag="VFM52_04510"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1250..1252,aa:Pro,seq:ggg)
     gene            complement(1429..2661)
                     /gene="serA"
                     /locus_tag="VFM52_04515"
     CDS             complement(1429..2661)
                     /gene="serA"
                     /locus_tag="VFM52_04515"
                     /EC_number="1.1.1.95"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008437819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate dehydrogenase"
                     /protein_id="HET8764461.1"
                     /translation="MKTSFPRQDIRVLLLEGVSRTAVEAFERAGYTNIEYHKKSLPEA
                     ELKERIAEAHIVGLRSRTQLTAEVLDHARRLIAVGCFCIGTNQVDLGKAEQLGIPVFN
                     APYSNTRSVAELVIAEAIMLLRGIPQKNAKCHRSGWAKSATGSYEARDKVLGIIGYGH
                     IGTQVGVLAESMGMHVIYHDIEPKLAMGNAHPAASLQDLLQRADVVTLHVPATPETKM
                     MFGATQIAAMREGAMLIHASRGSVVDIEALAAALKAGHLAGAAVDVFPVEPKSNDDPF
                     VSPLVGLDNVLLTPHIGGSTLEAQENIGVEVASKLVRYSDNGSTLSAVNFPEVSLPEH
                     PSSCRLLHIHKNVPGVLSRINELFSTGNMNINAQFLQTDAELGYVVVDVTADETQAGE
                     LKEKLAAIPGTLRSRVLY"
     gene            2774..>3166
                     /locus_tag="VFM52_04520"
     CDS             2774..>3166
                     /locus_tag="VFM52_04520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014160779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HET8764462.1"
                     /translation="MSVALDELVARLPALRLLREPGDLEHYGRDWTRRWTPAPLAIAL
                     PGSADEVQAIVRWANEHRIALVPSGGRTGLSGGAVAAHGELVVSLARMNHVVGFDAAD
                     RTLTVEPGMPLEAVHAAAREHGLVYPVDF"
BASE COUNT          468 a         1037 c         1128 g          533 t
ORIGIN      
        1 ctggggcggc gagcccgcgc gctggtcgct gcacgccgat ggcctgccgg cgtggctgca
       61 tccggggcgc ggcgcccggg tggcgcgcga cggccagacc gccggctact tcggcaccct
      121 gcatccgcaa ctggcgaagg ccctcgacct cggcccggac gtgcaggtgc tcgagcttgc
      181 gctggagccg ctgctggccc gccgcctgcc gctggccgaa ccggtggccc ggttcccgtc
      241 ggtgcgccgc gacctggcgg tcgaagtgcc ggaagcggtg acctgggcgc aggccggcga
      301 ggtcgtgcgg cgtaccctgg gcggcgtgct gaaggagctg cggctgttcg attgttatcg
      361 cggcaagggc gtcgaacccg gccgaaaaag tctcgctatg ggcttgattt tgcaggagcc
      421 atcccgcacg ctaaccgacg ctgacgcgga tggctgcgtg cagcaggcga tcgcggcatt
      481 ggagcaggca tgcaaggcaa agttgcgggg ttgacatggc gctgaccaag gcggacatgg
      541 ccgaacggct tttcgtggac gtcggcctca acaagcgcga ggccaaggag ttcgtcgacg
      601 cctgcttcga ggtcgtgcgc gaggcgctgg agaacggcga gcaggtgaag ctgtccggct
      661 tcggcaactt cgacctgcgc gaaaagaacc agcgcccggg gcgcaacccc aagaccggcg
      721 aggaaatccc gatttccgcg cgccgcgtgg taacgttccg gccggggcag aaactgaaag
      781 tcagggtcga aggctatgct ggatcagggg aataacaccg agcttccgcc catcccggcc
      841 aagcgctact tcaccatcgg tgaggtcggc gagctgtgcg gcgtgaagcc ccatgtgctg
      901 cgctactggg aacaggaatt ccccgcgctg aacccggtca agcgccgcgg caaccggcgc
      961 tactaccagc gccacgacgt gttgatgatc cgccagatcc gcgccttgct gtacgacgag
     1021 ggcttcacca tcaccggcgc gcgcgcgcgg ctcgaaggcc cgcaggcgcg ggtcgaggcg
     1081 agcatgtcgc accagatcgt gcgccaggtg cggatggagc tggaagaggt gctgagcctg
     1141 ctgcgccgct gagcgcgcgg gcagcttcgc agacgccggg cgaactgcta gactcgcagg
     1201 ctcactgttt cgcgtcgggg cgtagcgcag tctggtagcg catttgcctg gggggcaaag
     1261 ggtcgtcggt tcgaatccgg ccgccccgac caatccagtg accttccatc gaaacacgcc
     1321 gtccgccttg cgggcggcgt gtttttgtgt gcgtcgtggc ggatgcggaa acgcggacgg
     1381 gccggaatgc ccggcccgtc gttccatccc gccatggggc ctcgcggctc agtacagcac
     1441 gcggctgcgc agcgtgccgg ggatcgccgc cagcttctcc ttcagctcgc cggcctgcgt
     1501 ctcgtcggcg gtgacgtcga ccacgacgta gccgagttcg gcgtcggtct gcaggaactg
     1561 ggcgttgatg ttcatgttgc cggtggagaa cagctcgttg atgcgcgaga gcacgccggg
     1621 cacgttcttg tggatgtgca gcaggcggca gctcgacggg tgctcgggca gcgacacctc
     1681 ggggaaattc actgccgaca gggtggagcc gttgtcgctg tagcgcacca gcttgctggc
     1741 cacttcgacg ccgatgttct cctgcgcctc cagcgtgctg ccgccgatgt gcggcgtgag
     1801 cagcacgttg tccagcccga ccagcggcga gacgaacggg tcgtcgttgc tcttgggctc
     1861 gaccgggaac acgtccaccg cggcgccggc gaggtgcccg gccttcagcg cggcggccag
     1921 cgcctcgata tccaccacgc tgccgcgcga ggcgtggatc agcatggcgc cttcgcgcat
     1981 cgccgcgatc tgggtggcgc cgaacatcat cttcgtctcc ggcgtggccg gcacgtgcag
     2041 ggtgaccacg tcggcgcgct gcagcaggtc ctgcaggctg gcggcggggt gcgcgttgcc
     2101 catcgccagc ttgggctcga tgtcgtggta gatcacgtgc atgcccatgc tctcggccag
     2161 cacgcccacc tgggtgccga tgtggccgta gccgatgatg ccgagcacct tgtcgcgcgc
     2221 ctcgtagctg ccggtggccg acttcgccca gccgctgcgg tggcacttgg cgtttttctg
     2281 cgggatgccg cgcagcagca tgatggcttc ggcgatcacc agctcggcga cgctgcgcgt
     2341 gttcgaatac ggtgcgttga acaccgggat gccgagctgc tccgccttgc ccaggtccac
     2401 ctggttggtg ccgatgcaga agcagcccac cgcgatcagc cgccgggcgt ggtcgagcac
     2461 ctcggcggta agctgggtgc gcgagcgcag gccgacgatg tgcgcctcgg cgatgcgctc
     2521 cttgagttcg gcttccggca gcgacttctt gtggtattcg atgttggtgt agccggcccg
     2581 ttcaaaggcc tccaccgcgg ttcgactcac gccctccagc aacagcaccc ggatgtcttg
     2641 ccgggggaat gacgtcttca tggtggctcc atgtgcgaaa ggagtcgcta ctatgccaga
     2701 attgcggcgt tgcaacacgc gtcgtttgga cgtctgaacg aaattccccg gcatgcggga
     2761 catcggagta accatgagcg tcgcgctgga tgaacttgtc gcccgtttgc cggccctgcg
     2821 cctgctgcgc gagccgggcg acctcgaaca ctacggccgc gactggacgc ggcgctggac
     2881 gccggcgccg ctggcgatcg cgctgccggg ttcggccgac gaggtgcagg ccatcgtgcg
     2941 ctgggcgaac gagcaccgta tcgcgctggt gccctccggc ggccgcaccg ggctttccgg
     3001 cggcgcggtg gcggcgcatg gcgagctggt ggtgagcctc gcgcgcatga accacgtggt
     3061 cggcttcgac gccgccgacc gcacgctcac cgtcgagccg ggcatgccgc tcgaagccgt
     3121 gcatgcggca gcccgcgagc acggcctcgt ctacccggtg gatttc
//
LOCUS       DASSVL010000262         2118 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1079911,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000262 DASSVL010000000
VERSION     DASSVL010000262.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2118)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2118)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2118
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1079911"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..316)
                     /locus_tag="VFM52_04525"
     CDS             complement(<1..316)
                     /locus_tag="VFM52_04525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007510249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF488 domain-containing protein"
                     /protein_id="HET8764463.1"
                     /translation="MPGDPATIWTIGHSTRTLEEFLGLLAEYRIEAIADVRRFPGSRR
                     YPYFASDALAASLPTHGIAYQWMPRLGGRRKVQPGSPNTAWRHASFQGYADYIATTEF
                     AEG"
     gene            complement(318..530)
                     /locus_tag="VFM52_04530"
     CDS             complement(318..530)
                     /locus_tag="VFM52_04530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008437680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2945 domain-containing protein"
                     /protein_id="HET8764464.1"
                     /translation="MAQQFHIGDHVRWNSEAGYVTGHIVRVHTADTLYKGHPRHCTPA
                     DPQYEIKSDKTDHVAMHKGAALHKID"
     gene            650..1405
                     /locus_tag="VFM52_04535"
     CDS             650..1405
                     /locus_tag="VFM52_04535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007512234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Bax inhibitor-1/YccA family protein"
                     /protein_id="HET8764465.1"
                     /translation="MQSGNPTLNKNIFLDAASGTVFSHTDQAMTLNGTVNKTGLMLLL
                     VVIGAMFSWSQFTGPASLPAIGPLVLGGALVGFVLALVTVFKQKWAPVTAPLYALCEG
                     VFIGALSAIFEMRYPGIVMQAVGLTFGTMAAMLLAYRSGLIRATDKFKLGVVAATGGI
                     MILYLASFVAGFFGHSFGFINGSSTIGIVFSLAVVVIAALNLILDFDMIEQGVGAGAP
                     KYMEWYGAFALTVTLVWLYLEMLRLLSKLQSRN"
     gene            complement(1477..>2118)
                     /locus_tag="VFM52_04540"
     CDS             complement(1477..>2118)
                     /locus_tag="VFM52_04540"
                     /inference="COORDINATES: protein motif:HMM:NF015431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /protein_id="HET8764466.1"
                     /translation="GTGFDPARSQRTFRIIANDNAAMMLGPGLIARLREVPASGLRLA
                     FLHPDARPVEERLEQGEADVALGFRAPAGGALVVRQLLADRFLVARRKRHSRERKPLD
                     LDAYCAAGHVIVSSDGGGFASPVDRALAALGRKRRVALSVQDYTLAAALLATSDLLCT
                     LPRRFLRRFAGSLATCEVPFELAGFQLAMSWHPRMRDDAGHAWLRRQLVAAAR"
BASE COUNT          309 a          702 c          757 g          350 t
ORIGIN      
        1 ggccctcggc gaattccgtc gtggcgatgt agtcggcgta gccctggaac gaggcgtggc
       61 gccaggcggt gttcggcgag cccggctgca ccttgcggcg gccgccgagc cggggcatcc
      121 attggtaggc gatgccgtgc gtgggcaacg aggcggccag cgcgtcgctg gcgaagtacg
      181 ggtaacggcg cgaaccggga aagcggcgca cgtcggcgat cgcctcgatg cggtattcgg
      241 cgagcaggcc gaggaactcc tccagcgtgc gggtggagtg gccgatggtc cagatcgtgg
      301 cagggtcgcc gggcatctca gtcgatcttg tgcagcgccg cgcccttgtg catggcgacg
      361 tggtcggtct tgtcgctctt gatttcgtac tgcgggtcgg ccggcgtgca gtggcgcggg
      421 tggcccttgt acaaggtgtc cgcggtgtgc acgcgcacga tgtggccggt gacgtagccg
      481 gcctcggaat tccagcggac gtggtcgccg atgtggaact gctgcgccat ggttgtggtc
      541 tttcttccat tcgaggccgc catcctcgca ccgccgccgt gcacgcggtg cgacgctgca
      601 aaccgtgcgg cggcaggcta cgatggcgcc agacttgacg gagttcgaca tgcaaagcgg
      661 caaccccacc ctcaacaaga acattttcct cgatgccgcc agcggcaccg tgttcagcca
      721 caccgaccag gcgatgacgc tcaacggcac ggtcaacaag accggcctga tgctgctgct
      781 ggtggtgatc ggcgcgatgt tcagctggag ccagttcacc ggcccggcga gcctgccggc
      841 aatcgggccg ctggtgcttg gcggtgcgct ggtcggcttc gtgctggcgc tggtcaccgt
      901 gttcaagcag aaatgggcac cggtcaccgc gccgctctac gcgctgtgcg aaggcgtgtt
      961 catcggcgcg ctgtcggcga tcttcgagat gcgctacccc ggcatcgtga tgcaggccgt
     1021 gggcctcacc ttcggcacca tggcggcgat gctgctggcc taccgcagcg ggctgatccg
     1081 cgccaccgac aagttcaagc tcggcgtggt cgcggccacc ggcggcatca tgatcctcta
     1141 ccttgccagc ttcgtcgccg gcttcttcgg ccattcgttc ggcttcatca atggctcaag
     1201 cacgatcggc atcgtgttca gcctcgccgt ggtggtgatc gcggcgctca acctgatcct
     1261 cgatttcgac atgatcgagc agggcgtcgg cgccggcgcg ccgaagtaca tggagtggta
     1321 cggcgcgttc gcgctcaccg tgacgctggt gtggctgtac ctggaaatgc tgcgcctgct
     1381 gtcgaagctg cagtcgcgca actgacgccg gggcaccggc gtcgctcgac gaaaacgccg
     1441 ccctcgggcg gcgtttttgc gtgggtggcg cactggctat cgcgcggcgg ccaccagctg
     1501 gcggcgcagc cacgcatggc cggcgtcgtc gcgcatgcgc gggtgccagc tcatcgcgag
     1561 ctggaagccg gccagttcga acggcacctc gcatgtcgcc agcgagccgg cgaagcggcg
     1621 caggaaccgc cgcggcaagg tgcacagcag atccgaggtc gcgagcagtg cggccgccag
     1681 cgtgtagtcc tgcaccgaga gcgccacgcg gcgcttgcgg cccagcgccg cgagcgcgcg
     1741 gtcgaccggg ctggcgaagc cgccgccgtc gctcgacacg atgacgtggc cggcggcgca
     1801 ataggcatcg aggtcgagcg gcttgcgttc gcgcgagtgc cgcttgcgcc gcgcaaccag
     1861 gaaccggtcg gccagcagtt ggcgcacgac cagggcgccg ccggccggcg cgcggaaacc
     1921 cagcgccaca tccgcttccc cttgttccag gcgttcctcg accgggcgcg cgtcgggatg
     1981 caggaacgcc aggcgcagcc cgctcgccgg cacctcgcgc aagcgggcga tcagacccgg
     2041 cccgagcatc atcgcggcgt tgtcgttggc gatgatgcgg aacgtgcgct ggctgcgcgc
     2101 cggatcgaaa cccgtgcc
//
LOCUS       DASSVL010000263         2549 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_839206, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000263 DASSVL010000000
VERSION     DASSVL010000263.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2549)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2549)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2549
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_839206"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1680)
                     /locus_tag="VFM52_04545"
     CDS             complement(<1..1680)
                     /locus_tag="VFM52_04545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007080873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HET8764467.1"
                     /translation="MNAPRLAFAGRVARVFQDHPLTPILALAALLIGVAALLITPREE
                     EPQIDVTMANVIVPFPGADVHDVENLVASPLEQKLAGIDGIKHVYSVSRPGVALLTVE
                     FKVGVPRQTALVRLYNQVFQNRDLWPPALGVGQPMVRAMGIDDVPMLALTLWTDDPAR
                     GPTDLAEVAHTLETDLKHIPGTRDVYTLGAPDRAVVVQVDPAKLAAYGMAVDDLAQSL
                     KVANVVTQAGDRVAGDRDVPVTVGTFLAGADDIAQLVIGLKGGQPVFLSDVAAIRRGA
                     DLPDQYVWFGTPPGKGGPAAGTAPAVTMVVTKLSGTNAADITQAIRHRLDALEGVVIP
                     EGVHVVVTRDYGETSTAKADLLMHKLLFATLSVVLLVLLTLGWREAIVVGSAVVITLM
                     LTLFASWAMGFTINRVSLFALIFSIGILVDDAIVVVENIHRHMALGGRSLREAIPEAV
                     GEVGGPTTLATFTVIAALLPMAFVSGLMGPYMRPIPINASAGMLLSLAVALVVTPWLA
                     LKLVHRHASPAKHEDGPRETRLLRLFRRLMTPVLGGGRAPRRRRLLFASMGV"
     gene            complement(1677..2309)
                     /locus_tag="VFM52_04550"
     CDS             complement(1677..2309)
                     /locus_tag="VFM52_04550"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HET8764468.1"
                     /translation="MAAAAAALRSAGQQADYTVLRAPFDGVITQRFVHVGEAVQSGPP
                     TPQPLIALAALDALRVDVVVPQGAVDVIRASPGASVVLDDGKRVQAAKVIVFPYADPG
                     THSFRVRVELPAGGSGLYPGMTVKVAFAVGRATRLLVPAGALVRRGELSAVYVVGADH
                     SVGLRQLRLGHRIGDEVEVLAGLVPGDRIARDPEAAALYLIKQHGGNTSP"
     gene            2335..>2549
                     /locus_tag="VFM52_04555"
     CDS             2335..>2549
                     /locus_tag="VFM52_04555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8764469.1"
                     /translation="MRARDQSTLENGIGAFPVRLGVARFGMRCRHVGRGGPPSGLLLD
                     VTEAHQHVALADPIADIHRQLEHARIGL"
BASE COUNT          424 a          945 c          826 g          354 t
ORIGIN      
        1 cacgcccatc gacgcgaaca gcaagcgccg ccggcgcggc gcgcggccac caccgaggac
       61 cggtgtcatc aagcgccgga acaggcgcag caggcgcgtc tcacgcgggc cgtcttcatg
      121 ttttgccgga gatgcgtgac ggtgcaccag cttcaacgcc agccatggcg tcaccaccag
      181 cgcgaccgcc agcgacagca gcatgccggc cgaagcgttg atcgggatcg gccgcatgta
      241 cggccccatc agccccgaca cgaacgccat cggcagcagc gccgcgatca cggtgaaggt
      301 cgcgagggtg gtcggtccgc cgacttcgcc gaccgcctcg ggaatcgcct cgcgcaacga
      361 gcgcccaccc agcgccatgt gccggtggat gttctccacc accacgatcg cgtcgtccac
      421 caggatgccg atcgagaaga tcagcgcgaa cagcgacacg cggttgatcg tgaaacccat
      481 cgcccacgat gcgaacagcg tcagcatcag ggtgatgacc accgcgctgc ccaccacgat
      541 cgcctcgcgc cagccaagcg tcagcagcac cagcagcacc accgacagcg tggcgaacag
      601 cagcttgtgc atcaacaggt cggccttggc ggtggaggtt tcgccgtagt cgcgggtcac
      661 caccacgtgc acgccttccg ggatcaccac gccttcgagc gcgtcgaggc gatgccggat
      721 cgcctgcgtg atgtcggcgg cgttggtgcc ggacaacttg gtcacgacca ttgtcaccgc
      781 cggcgccgtg ccggccgcgg ggccgccctt gccgggcggc gtgccgaacc agacgtactg
      841 gtccggaagg tcggcgccgc gccggatcgc ggcgacgtcg gacaggaaca ccggctggcc
      901 gcccttcaat ccgatcacca gctgcgcgat gtcgtcggca ccggcgagga aagttccgac
      961 cgtcaccggg acgtctcggt ccccggcaac gcgatcaccg gcctgcgtaa ccacgttggc
     1021 caccttcagc gactgcgcga gatcatcgac cgccatgccg tacgcggcca gtttcgccgg
     1081 atcgacctgc accaccaccg cgcggtcggg cgcacccagc gtgtacacgt cacgggtgcc
     1141 ggggatgtgc ttgaggtcgg tttccagcgt gtgcgcaacc tcggcgaggt cggtcggtcc
     1201 gcgcgccgga tcgtcggtcc acaacgtcaa cgccagcatc ggcacgtcgt cgatacccat
     1261 cgcgcggacc atcggctgcc cgacgcccag cgccggtggc cacaggtcgc ggttctggaa
     1321 cacctggttg tacaggcgca ccagcgcggt ctggcgcggc acgccgacct tgaactcgac
     1381 ggtcagcaac gccacgcccg ggcggctgac cgaatacacg tgcttgatgc cgtcgatgcc
     1441 ggcgagtttc tgttccagcg gcgacgccac caggttttcg acgtcgtgca cgtccgcgcc
     1501 ggggaacggc acgatcacgt tggccatggt cacatcgatc tgcggctctt cctcgcgcgg
     1561 cgtgatcagc agcgcggcaa ccccgatcag cagcgccgcg agcgccagga tcggcgtcag
     1621 cggatggtcc tggaatacgc gcgcgacgcg cccggcaaac gccagccgtg gcgcgttcac
     1681 ggcgacgtgt ttccgccgtg ctgtttgatg agatacagcg cggccgcttc gggatcgcgc
     1741 gcgatgcgat cgcccggtac aagcccggcc agcacttcga cttcgtcgcc gatgcgatgc
     1801 cccagccgca actggcgcag gcccaccgaa tgatccgcgc cgaccacgta caccgcgctc
     1861 aattcaccgc gccggaccag tgcgccggcc ggcaccagca gccgcgtcgc ccggccgacc
     1921 gcgaacgcca ccttgaccgt catcccggga tacaagccgc tgccgcccgc cggcaactcg
     1981 acccgcaccc ggaacgagtg cgtgcccgga tcggcgtacg gaaacacgat gaccttggcg
     2041 gcctgcacgc gtttgccgtc atccagcacc acgctcgcgc ccggcgaagc gcggatgaca
     2101 tcgacagcgc cttgcggcac caccacgtcc acccgcaggg cgtccagcgc cgccaatgcg
     2161 atcaagggct gcggcgtcgg cggcccggac tgcaccgcct cgccgacatg cacgaagcgc
     2221 tgcgtgatga cgccgtcgaa cggcgcccgc aacacggtgt agtcggcctg ctggccggca
     2281 ctgcgcagcg cggccgcggc cgcggccagc gcggcgcgcg gtcgcggcgt ccagttgcgc
     2341 gcgcgcgatc aatccacgct ggaaaatggc atcggtgcgt ttccagttcg cctcggcgtc
     2401 gcgcgattcg gcatgcgctg ccgccacgtt ggccgcggcg gcccgccgtc cggactgctg
     2461 ctcgacgtca ctgaagcgca ccagcacgtc gcccttgcgg atccgatcgc cgacatccac
     2521 aggcagctcg agcacgcgcg cattggtct
//
LOCUS       DASSVL010000264         2299 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_104626, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000264 DASSVL010000000
VERSION     DASSVL010000264.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2299)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2299)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2299
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_104626"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            57..1289
                     /locus_tag="VFM52_04560"
     CDS             57..1289
                     /locus_tag="VFM52_04560"
                     /inference="COORDINATES: protein motif:HMM:NF017390.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M56 family metallopeptidase"
                     /protein_id="HET8764470.1"
                     /translation="MAAHALQALAVVTLALVVVLVVRRPLRRICGAGPAFGLWLLPPV
                     ALVIPWLPMPPTAAFLPTMHAIPAGFMAAPSAMAGADQPVWWLLAWLAGTAVCLIRLG
                     THYRRLRAGAHPLPAAWAPELRDELAGIAPERLRLHATGPAVLWAPRSLVLLPADFIH
                     RFDPLQRRLVLRHELAHLHHGDALWALLAEVAWAALWFHPLAWLARQYFRLDMELACD
                     ERVLGAMPHVEHAYARTLLHSVGLAPTPTLIPWLTGAQLKERLTMIQHHRPGRWRRRI
                     GFAAITALLVGGAFVAHAATQDQPAASDLSYNVAIQPHYPAAAIKAAEQGIVILDVQV
                     LPDGAVGTVDYDAKASTTTSADLIAAATDAARQWRFNPEIKDGKPVTGHARVPVAFSM
                     TPLPGKATRDSIKNQGAK"
     gene            1421..1915
                     /locus_tag="VFM52_04565"
     CDS             1421..1915
                     /locus_tag="VFM52_04565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016944337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="C40 family peptidase"
                     /protein_id="HET8764471.1"
                     /translation="MLGLALAVLAACSTAPRRPAPARSVLANEPARAPAGNAAAANDV
                     LFRAMALVGTPYRYGGNTPTGGFDCSGLVDYIYRTSTGLELPRTSSELADMDAEKVKR
                     MTHLVSGDLIFFTIGGRISHVGVYVGKGQFVHAPNTGGTVRLDNLEQTYWSDHFAYGR
                     RVLN"
     gene            1939..>2299
                     /locus_tag="VFM52_04570"
     CDS             1939..>2299
                     /locus_tag="VFM52_04570"
                     /inference="COORDINATES: protein motif:HMM:NF019976.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nuclease-related domain-containing protein"
                     /protein_id="HET8764472.1"
                     /translation="MILKSADDRRDELARLQQQTKSPDAVVAKVAATALRMRAAGANN
                     EDNAAYFIDFGYAKTPNWVVIHDLRLESHGRTAQIDHLLICRTYEFYVLESKHFRAGV
                     KITETGEFMRWDDYRKTY"
BASE COUNT          378 a          838 c          713 g          370 t
ORIGIN      
        1 ggacatcgcc gaactgcgca agctgctcga ccgcatcgac cggaaggaac ggtgagatgg
       61 ccgcccacgc cttgcaggca ctcgccgtcg tcaccctcgc gctggtcgtc gtgctcgtcg
      121 tgcggcgacc gttgcgccgc atctgcgggg cgggcccggc attcggactg tggctgctgc
      181 cgccggtggc cttggtgatc ccgtggctgc cgatgccacc aaccgccgcc tttctgccga
      241 cgatgcatgc cattccggcc ggcttcatgg ccgcgccatc ggccatggcg ggcgcggatc
      301 agcccgtgtg gtggctgctc gcatggctgg ccggcaccgc ggtgtgcctg atccggctcg
      361 gcacccatta ccggcgcctg cgcgccggcg cccacccgct gcccgccgcg tgggcacccg
      421 agctgcgcga tgaactggcc ggcatcgcac cggagcggct gcgcctgcac gccaccggcc
      481 cggcggtgct gtgggcacca cgcagcctcg tgctgctgcc ggcggatttc atccaccgct
      541 tcgacccact gcaacgccgc ctcgtgctgc gccacgagct ggcccacctg caccacggcg
      601 atgccctgtg ggcactgctg gccgaggtgg cgtgggccgc gctgtggttc cacccgctgg
      661 cctggctggc ccgccagtat ttccggctcg acatggagct ggcgtgcgac gagcgcgtgc
      721 tgggtgccat gccgcacgtc gagcacgcat acgcccgcac cctgctgcac agcgtcggcc
      781 tcgccccgac cccgacgctg atcccgtggc tcaccggggc ccaactcaag gaacgcctca
      841 ccatgatcca gcatcatcgc cccggccgct ggcgccgccg gattggcttt gccgccatca
      901 ctgcactgct ggttggcggt gcgttcgtcg ctcatgccgc cacgcaggac cagccggccg
      961 cctcggatct gtcctacaac gtggccatcc agccgcacta ccccgctgcg gccatcaagg
     1021 cagccgaaca gggcattgtc attctggatg tgcaggtgct gcccgacggc gcggtcggca
     1081 ccgtcgacta cgacgccaag gccagcacca ccacctcggc cgacctgatc gcggcggcca
     1141 ccgacgccgc acggcagtgg cgcttcaacc ccgagatcaa ggacggcaag ccggtcaccg
     1201 gccacgcgcg ggtaccggtc gcgttcagca tgacgccgct gcccggcaag gccacccggg
     1261 acagcatcaa gaatcaaggt gcgaagtaat aggaaatcgg ttgatttgaa tatggattgt
     1321 cgagtgataa cctcgctgcg tctcgcaccg gggttgtctc gtgaatcagc cacccgccac
     1381 ctgcctcacc gttgccccga cgcagctcgg gcgcctcgtc ctgctgggcc tcgccctcgc
     1441 cgtgctggcc gcctgcagca ccgcgccacg ccggccggcc cccgcgcgat ccgtccttgc
     1501 caatgaacca gcccgcgcac cggccggcaa tgcggcggcc gcgaacgacg tgctgttccg
     1561 cgccatggcc ctggtcggca cgccgtatcg ctacggcggc aatacgccga ccggcggctt
     1621 cgattgcagt ggcctggtcg actacatcta ccgcacctcg accggcctcg agttgccgcg
     1681 tacatcgagc gaactggccg acatggatgc ggaaaaggtc aagcgcatga cccacctcgt
     1741 cagcggcgac ctgatcttct tcaccatcgg cggccgcatc agccacgtcg gcgtctacgt
     1801 cggcaagggc cagttcgtgc acgcacccaa caccggcggc accgtgcgcc tggacaacct
     1861 cgaacagacg tactggagcg accacttcgc ctacgggcga cgcgtgctca actgagtaca
     1921 gggagccaca gggaaagcat gattctcaag agcgccgacg accgccgcga cgagttggcg
     1981 cggttgcagc aacaaaccaa gtctcctgat gcggtcgttg caaaggtcgc tgcgaccgct
     2041 ctgcgcatgc gtgcggccgg cgcaaacaat gaagacaacg cggcttattt cattgatttc
     2101 gggtacgcaa aaacccccaa ctgggtcgtg atccacgatc ttcggctgga atcgcacggg
     2161 cgcactgcac agatcgacca cctgctgatt tgccgcacat atgagttcta cgtgctcgaa
     2221 tccaagcatt tccgcgccgg cgtgaagatc actgaaaccg gggagttcat gcgctgggac
     2281 gactaccgga aaacctatc
//
LOCUS       DASSVL010000265         2086 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1319806,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000265 DASSVL010000000
VERSION     DASSVL010000265.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2086)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2086)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2086
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1319806"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..481
                     /locus_tag="VFM52_04575"
     CDS             <1..481
                     /locus_tag="VFM52_04575"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HET8764473.1"
                     /translation="VIASVNGAAAGAGLSIALACDMRIASDRARFTTAFRNVGLSGDY
                     GGSYFLTRLAGDAVARELYVTGRAIDAAEALQIGSVNRVAPHDELEAETLALARTIAD
                     GPVGVYARMKRNLNLAAHADLRTVLESEALQMTLSGFAPDAREAGRAFVEKRKPQFS"
     gene            600..905
                     /locus_tag="VFM52_04580"
     CDS             600..905
                     /locus_tag="VFM52_04580"
                     /inference="COORDINATES: protein motif:HMM:NF013677.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HET8764474.1"
                     /translation="MARGRAHSREFKLDVVRQITSGEKRLAQVCREQGLAESLVHRWR
                     KEVEVRGEAAFTTGQPTEGERLAERVAELERFCGQLALENAVLKKALQTAPSRTGTR"
     gene            902..1765
                     /locus_tag="VFM52_04585"
     CDS             902..1765
                     /locus_tag="VFM52_04585"
                     /inference="COORDINATES: protein motif:HMM:NF033516.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
                     /protein_id="HET8764475.1"
                     /translation="MITATHAEQPALSVRQLCTLAGVSRSWYYGHPSAAQQAARDVAL
                     RDAIERIILAFPGYGYRRVTHALVRDGWAVNHKRVLRVMRQEALLCVLTRQFVPTTDS
                     THGYRRYPNLLAGVVLERPDQAWVADITYIRLPTTFVYLAAILDAFSRRCVGWQLSRH
                     IDTTLALAALEQALADRCPAAGLIHHSDQGVQYASTAYVERLAAAGACVSMAAVGNPY
                     ENAKAERFFRTLKHEEVYLKDYQTFAEAEANLDRFIGDVYNSKRLHSALGYRPPAEFE
                     QRWAAPAAPPS"
BASE COUNT          349 a          715 c          701 g          321 t
ORIGIN      
        1 ggtgatcgcg agcgtgaacg gtgcggcggc cggcgccggc ctcagcatcg ccctcgcctg
       61 cgatatgcgc atcgcctcag atcgggcgcg cttcaccacg gcgttccgca acgtcggcct
      121 ctccggcgac tacggcggct cgtacttcct cacccgcctg gccggcgatg ccgtggcgcg
      181 cgagctgtac gtcaccggcc gcgcgatcga cgcggcggag gcgctgcaaa tcggcagcgt
      241 caaccgcgtg gcgccgcacg acgagcttga ggcggagacg ctggcgctgg cgcgcacgat
      301 cgcggacggc ccggtcggtg tctatgcgcg aatgaagcgc aacctgaacc tcgccgcgca
      361 cgcggatctg cgcacggtgc tggagagcga ggcactgcag atgacgctct ctggcttcgc
      421 gccggacgcg cgtgaagccg gccgcgcctt cgtggagaag cgcaaaccgc agttcagcta
      481 agggcgcatg ggcgttggcc gtcactcccc tgaactgaac ccctgaaccc ggaccacggg
      541 caaagtcact atccgagccg tcggcggtac gctggcggca cgtacaagga gtgaccgcca
      601 tggcccgtgg tcgtgcccat tcgcgcgagt tcaagctgga cgtcgtgcgg cagatcacca
      661 gcggcgagaa acgcctggcc caggtttgcc gggaacaggg tctggccgag agcctggtcc
      721 atcgctggcg caaggaagtg gaggtgcgcg gcgaggcggc cttcaccacc ggccagccga
      781 ccgagggcga gcggctggcc gagcgcgtgg cggaactgga gcgcttctgc ggccagctcg
      841 ccctggagaa cgcggtgtta aaaaaagcct tgcagaccgc cccctcacgg accggcacgc
      901 gatgatcacg gccacccacg ccgagcagcc cgcgctgtcg gtccgtcagc tctgcacgct
      961 ggccggggtc agccgtagct ggtactacgg ccatcccagc gccgcgcagc aggcggcccg
     1021 cgacgtggcg ctgcgcgatg ccatcgaacg gatcatcttg gcctttcccg gctacggcta
     1081 ccggcgggtc acccacgccc tggtgcgcga tggctgggcc gtcaaccaca agcgggtgct
     1141 gcgcgtgatg cgccaggaag cgctcttgtg cgtgctcacc cggcagtttg tgccgaccac
     1201 cgactccacg cacggctacc gccgctatcc gaacctgctc gccggcgtgg tcctcgagcg
     1261 ccccgaccaa gcgtgggtgg cggacatcac ctacatccgc ttgcccacca ccttcgtcta
     1321 cctggcagcg atcctcgatg ccttctcgcg ccgctgtgtg ggctggcagc tgtcgcggca
     1381 catcgacacg acactggcgc tcgccgcctt ggagcaggcg ttggccgacc ggtgtccggc
     1441 cgccggcttg atccaccatt ccgaccaggg cgtgcagtac gccagcaccg cctatgtgga
     1501 gcggctggcc gcagcgggag catgcgtgag catggcggcc gttggcaatc cgtacgagaa
     1561 cgccaaggcg gagcggttct tccgcacgct caaacatgag gaggtgtacc tcaaggacta
     1621 ccagacgttc gccgaggcgg aggccaatct cgaccgcttc atcggcgacg tctacaacag
     1681 caagcgcctg cactcggctc tgggctaccg gccgcctgcg gagttcgagc agcgctgggc
     1741 ggcgcccgca gccccaccat cctgactttc cccgtggtcc ggagactggg gttcaccaca
     1801 cagtatcgct tgttcaagag cgtatgggag agaggggcga tccggcgctg ctggaatcga
     1861 atgacacagg gttaatcgtt cgtcgatcgg aacgctccaa gccggatcgc cccttcgcct
     1921 atgccgcagg catgggagaa ggggacgggg gatgagggcc acgcgcccct cacatgacga
     1981 cgatcttcct ctttgacatc gacatgacgc tgatccgcac caacggcgcc ggccggcggg
     2041 cgatgaaccg cgctattcat gagctgtacg gagtggagaa cgcctt
//
LOCUS       DASSVL010000266         3908 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_627686, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000266 DASSVL010000000
VERSION     DASSVL010000266.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3908)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3908)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3908
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_627686"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..791
                     /locus_tag="VFM52_04590"
     CDS             <1..791
                     /locus_tag="VFM52_04590"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HET8764476.1"
                     /translation="FLFALFSVFPVAWMVITAFKEDSDLYNVDNNPFLYNLPPTLKHI
                     GFLFTNTHYPTFLWNSLFIGVLVVVITLVLAVPAAYSLARLVGRWGERSGIAVFLVYL
                     IPPTLLFIPLYQLISFVHAANTVWALVLVYPTITVPFCTWLLLGFFKSIPRDLEDAAM
                     TDGCSRWQAFRRVSLPLAMPGIATCVVFAFALSLSDYIYAASFVSSTAARTVSAGVPI
                     ELIRGDIYFWQSLMAAGAIVAIPLAIAYGLLFNKLVKGFAATSS"
     gene            complement(832..1905)
                     /gene="queG"
                     /locus_tag="VFM52_04595"
     CDS             complement(832..1905)
                     /gene="queG"
                     /locus_tag="VFM52_04595"
                     /EC_number="1.17.99.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018971347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0052693 - epoxyqueuosine reductase
                     activity [Evidence IEA];
                     GO_process: GO:0008616 - queuosine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA epoxyqueuosine(34) reductase QueG"
                     /protein_id="HET8764477.1"
                     /translation="MASISYPQLALDIKRWARELGFAEAGITDTDLSHDEEGLRQYLA
                     EGHHGTMHWLQDRLDLKTHPEALHPGTTRIICVRMNYAQADIKQAWNVVHDSELGYIS
                     RYALGRDYHKLVRKLLQKLADRITAEIGPFNYRAFCDSAPVMEKSLAQKAGLGWRGKH
                     TLTLSRSAGSYFFLGELFTDLPLPIDQPVENYCGTCTRCIDACPTGAITAPYQLDAKR
                     CISYLTIEYKGSIDPELRPLMGNRVFGCDDCQLACPWNKFAQVTLENDFLPRHHLDGT
                     KLTELFAWDEATYLAKTEGMSIRRAGYESWLRNIAIGLGNAKHSAEVVAALRARADHP
                     SEIVREHVAWALAEQAKKAAAAT"
     gene            complement(2010..2840)
                     /locus_tag="VFM52_04600"
     CDS             complement(2010..2840)
                     /locus_tag="VFM52_04600"
                     /EC_number="2.8.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019466463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008146 - sulfotransferase activity
                     [Evidence IEA];
                     GO_function: GO:0050656 - 3'-phosphoadenosine
                     5'-phosphosulfate binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfotransferase"
                     /protein_id="HET8764478.1"
                     /translation="MPATPSSRKFHFISGMPRAGSTLLAAVLNQNPRFRAGMTSPLAD
                     ILGVVIAEASGKNDFSHAVTDTQREAMLRGLVENFYADAPGDVVFDTSRLWCSRMPLL
                     ATLFPQAKVIACVRQLSWVLDSMERLVRQQPVNVSKVFRYDTNTTVYSRVEALTDPRG
                     MVGFGFQATKDAFYGQYAPGHLLLLTYESLVRNPEAALRAVYQFLGEPWFAHDFDHLA
                     YAADEFDARVGLPGLHTVRPKLAAVERASVLPREIFARFTHESFWMDPKNNVGQVPVI
                     "
     gene            complement(2920..3903)
                     /locus_tag="VFM52_04605"
     CDS             complement(2920..3903)
                     /locus_tag="VFM52_04605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008211371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HET8764479.1"
                     /translation="MAGTSRKTVSRVINNEPNVHASTRKQVLDAIAKLKYRPLTSARS
                     LATNRSFMIGLLYDNLSPSYIMEVQAGVLAACEAQHYSMMVQPLVSAAPDFVERVDDI
                     LSRHRPDGLILTPPITDHPQLLKHLRTAELPFASIAPRHPEGCIGVMLREREAAAAMV
                     AHLVALGHRHIAHIVGDLEHGAGLWRLAGFRDGLRRAKLKETPAYMIQGRFSFESGVE
                     AMRKLLALKHRPTAVFAADDDMAIGAIWAAAEAGVAVPGEISICGFDDTAIATQVWPP
                     LTTIHQPVRDMGRRATEELLHRIQGKGEATMVDVGYEMRLRASTAPPAKQA"
BASE COUNT          557 a         1250 c         1402 g          699 t
ORIGIN      
        1 tgttcctgtt cgcgctgttc tcggtgttcc cggtggcgtg gatggtgatc accgcgttca
       61 aggaggattc cgacctctac aacgtcgaca acaatccgtt cctgtacaac ctgccgccga
      121 cgctcaagca catcgggttc ctgttcacca acacgcacta cccgacgttc ctgtggaact
      181 cgctgttcat cggcgtgctg gtggtggtca tcaccctggt gctggcggtg ccggcggcgt
      241 acagcctcgc gcggctggtc gggcgctggg gcgagcgctc cggcatcgcg gtgttcctgg
      301 tgtacctgat cccgccgacg ctgctgttca ttccgctcta ccagctcatc agcttcgtgc
      361 acgcggcgaa cacggtgtgg gcgctggtgc tggtgtaccc gacgatcacc gtgccgttct
      421 gcacctggct gctgctcggg ttcttcaagt cgatcccgcg cgacctggag gacgccgcga
      481 tgaccgacgg ctgctcgcgc tggcaggcgt tccgccgggt gtcgctgccg ctggcgatgc
      541 ccggcatcgc gacctgcgtg gtgttcgcgt tcgcgctctc gctcagcgac tacatctatg
      601 cggcctcgtt cgtcagctcg acggcggcgc gcacggtgag cgccggtgtg ccgatcgagc
      661 tgatccgcgg cgacatctac ttttggcagt cgctgatggc ggctggcgcg atcgtcgcga
      721 tcccgctggc gatcgcctac gggctgctgt tcaacaagct ggtgaagggg ttcgcggcaa
      781 cgtcgtcgtg agcagaagca gcccgggttg cagcccggca ggcgcgcggg gctaggtcgc
      841 ggccgcggcc ttcttcgcct gctcggccag cgcccaggcc acgtgttcgc gcacgatttc
      901 ggatgggtga tcggcgcgtg cgcgcagcgc ggcgacgact tccgccgaat gcttcgcgtt
      961 gcccaggccg atggcgatgt tgcgcagcca gctttcgtag ccggcgcggc ggatcgacat
     1021 gccttcggtc ttggcgaggt aggttgcctc gtcccaggcg aacagctcgg tgagcttggt
     1081 gccgtccagg tggtggcgcg gcaggaagtc gttttccagc gtcacctgcg cgaacttgtt
     1141 ccacgggcag gcgagctggc agtcgtcgca gccgaacacg cggttgccca tcagcgggcg
     1201 cagctcgggg tcgatcgagc ccttgtactc gatggtgagg taggagatgc agcgcttcgc
     1261 gtcgagctgg tagggcgcgg tgatcgcgcc ggtggggcag gcgtcgatgc agcgtgtgca
     1321 ggtgccgcag tagttctcca ccggctggtc gatcggcagc ggcaggtcgg tgaacagttc
     1381 gccgaggaag aaatacgagc ccgcgctgcg cgacagcgtg agcgtgtgct tgccgcgcca
     1441 gccgagcccg gccttctgcg ccagcgactt ctccatcacc ggcgcggagt cgcagaacgc
     1501 gcggtagttg aacgggccga tctcggcggt gatccggtcg gcgagtttct gcagcagctt
     1561 gcgcaccagc ttgtggtagt cgcggccgag cgcatagcgc gagatgtagc cgagctccga
     1621 gtcgtgcacc acgttccacg cctgcttgat gtcggcctgc gcgtagttca tgcgcacgca
     1681 gatgatgcgg gtggtgccgg ggtgcagcgc ctcggggtgg gtcttgagat ccagccggtc
     1741 ctggagccag tgcatggtgc cgtggtggcc ctcggcgagg tactgcctga ggccttcctc
     1801 gtcgtgcgag aggtcggtgt cggtgatgcc ggcttcggca aagccgagtt cacgcgccca
     1861 gcgcttgatg tccagcgcga gctgcgggta ggaaatggac gccatggtga tgcgcttgac
     1921 tgcggctgcg gaccaggttg cgacgggcgg cgtggccgcg cttcgtcgca ctcaggatag
     1981 cgggcgcagt ggcagccgga aacggcgact cagatcaccg gcacctggcc gacgttgttt
     2041 ttcgggtcca tccagaacga ttcgtgggtg aagcgcgcaa aaatctcgcg cggcagcacc
     2101 gaggcgcgtt ccaccgccgc gagcttcggc cgcacggtgt gcaggccggg caggccgacg
     2161 cgcgcgtcga actcgtcggc ggcgtaggcg aggtgatcga agtcgtgcgc aaaccacggt
     2221 tcgccgagga actggtagac cgcgcgcagc gcggcctccg ggttgcgcac caggctttcg
     2281 taggtgagca gcagcaggtg gcccggcgcg tactggccgt agaacgcatc cttggtggcc
     2341 tggaaaccga agcccaccat gccgcgcggg tcggtcagcg cttccacccg cgagtacacc
     2401 gtggtgttgg tgtcgtagcg gaacaccttg ctgacgttca ccggctgctg gcgcaccagg
     2461 cgctccatgc tgtccagcac ccacgacagc tggcgcacgc aggcgatgac cttggcctgc
     2521 ggaaacagcg tcgccaggag cggcatgcgg ctgcaccaca gccggctggt gtcgaacacc
     2581 acgtcgcccg gcgcgtccgc atagaagttc tcgaccagcc cgcgcagcat cgcctcgcgc
     2641 tgggtgtcgg tgaccgcgtg cgagaaatcg ttcttgccgc tggcctcggc gatcaccacg
     2701 ccgaggatgt cggccagcgg gctggtcatg ccggcacgga agcgtgggtt ctggttgagc
     2761 accgcggcga gcagcgtgct gccggcgcgc ggcatgccgg agatgaaatg gaatttccgg
     2821 ctggacggcg tggcgggcat gcgggtctcc tcgaacagat ggatcggctt cagtgtgacg
     2881 gactctcgcg gcgtgggcga gtcgtgcgag ggccgggttt catgcctgct tcgctggcgg
     2941 cgcggtggac gcgcgcaggc gcatctcgta gccgacgtcg accatcgtgg cctcgccctt
     3001 gccctggatg cggtgcagca gctcctcggt cgcacgccgt cccatgtcgc gcaccggctg
     3061 atggatggtg gtgagcggcg gccagacctg ggtggcgatc gcagtgtcgt cgaagccgca
     3121 gatcgagatt tcgccgggta ccgccacgcc ggcctcggcc gcggcccaga tcgcgccgat
     3181 cgccatgtcg tcgtcggcgg cgaacaccgc ggtggggcgg tgcttgagtg ccagcagctt
     3241 gcgcatcgcc tccacgccgg actcgaacga gaaccggccc tggatcatgt aggccggggt
     3301 ttccttcagc ttggcgcggc gcaggccgtc gcggaaaccg gccaggcgcc acagcccggc
     3361 gccgtgctcg agatcgccga cgatatgcgc gatgtggcga tggccgagcg ccaccaggtg
     3421 cgcgaccatc gccgccgccg cctcgcgttc gcgcaacatc acgccgatgc agccctcggg
     3481 gtggcgcggc gcgatcgagg cgaacggcag ctcggccgtg cgcaggtgct tgagcagttg
     3541 cgggtggtcg gtgatcggcg gggtgaggat cagcccgtcc ggccggtggc gcgacaggat
     3601 gtcgtccacg cgctcgacga agtccggcgc cgccgacacc agcggctgca ccatcatgct
     3661 gtagtgctgc gcctcgcatg ccgccagcac gccggcctgc acctccatga tgtagctggg
     3721 cgacaggttg tcgtacagca gcccgatcat gaacgagcgg ttggtcgcga ggctgcgcgc
     3781 cgaagtcaat ggccggtact tgagcttggc gatcgcatcc agcacctgct tgcgcgtgga
     3841 cgcgtgcacg ttcggctcat tgttgatcac ccgcgagacg gtcttgcgcg aggttcccgc
     3901 cacgtggg
//
LOCUS       DASSVL010000267         2103 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_232012, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000267 DASSVL010000000
VERSION     DASSVL010000267.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2103)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2103)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2103
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_232012"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..390)
                     /locus_tag="VFM52_04610"
     CDS             complement(<1..390)
                     /locus_tag="VFM52_04610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007510771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine dehydrogenase"
                     /protein_id="HET8764480.1"
                     /translation="MSAVLVEEAVPAAKPRAAAAVALLGTGVVGGAFLKLLNTPAAGP
                     LRLVAAANSRRQETVPARLAARNLREQLRDSGAPRDDDALLAALDASGAAARLIVDAT
                     ASAALAGRHAEWLARGYHVVTANKALAG"
     gene            complement(387..1577)
                     /gene="metB"
                     /locus_tag="VFM52_04615"
     CDS             complement(387..1577)
                     /gene="metB"
                     /locus_tag="VFM52_04615"
                     /EC_number="2.5.1.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007807677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0019346 - transsulfuration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cystathionine gamma-synthase"
                     /protein_id="HET8764481.1"
                     /translation="MSATPAPCTRAVRAGIESDTQHGAVVPALHLSTNYSFAGFGRKR
                     AYDYSRSGNPTRDLLGEALAELEQGAGAVVTSSGMAAVALALELVPAGARVLAAHDCY
                     GGTWRLLDAWAKKGRFTVEFADLTDPAALAAGLAAKPALVWVETPSNPLLRITDIRHV
                     AQAAHAVGALVVVDNTFLSPALQQPLTLGADIVVHSTTKYINGHSDVVGGAVIAREPE
                     LTDKLKWWGNCNGIIGAPFDSYLTLRGLRTLGVRLRQHQENAERIAAYLDAHPAVRKV
                     YYPGLAANPYHALAARQQQGFGAMLSFELDGDEAQIAAFVDGLRFFSLAESLGGVESL
                     IAHPATMTHASMAPEARRRAGIADGLLRMSVGIEDGDDLLRDLAAGLTRAEQAGEAKR
                     RVSA"
     gene            complement(1670..>2103)
                     /locus_tag="VFM52_04620"
     CDS             complement(1670..>2103)
                     /locus_tag="VFM52_04620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007807676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HET8764482.1"
                     /translation="SGHVDEALALARQLAITTYRGSAEFGRRFAGAPEQRAERFHFPV
                     EDYLEHQGRRFVERFDADRFLALSESIDLHQVEPEQVAAPATLIGFPSDRLVPLADLC
                     ELQRRLRGPATLEVVESPYGHDAFLKEPEQLAPLLREALAL"
BASE COUNT          284 a          745 c          779 g          295 t
ORIGIN      
        1 gccggccagg gccttgttgg cggtgacgac gtggtagccg cgcgccagcc attcggcatg
       61 acgaccggcc agcgccgcgc tggcggtggc gtcgacgatc aaccgggccg cggcgccgct
      121 ggcatcgagc gcggccagca gggcgtcgtc gtcgcggggg gcgccgctgt cgcgcagctg
      181 ctcgcgcagg ttgcgcgcgg caaggcgcgc cgggacggtt tcctgccgtc gcgagttggc
      241 ggcggcaacc agccgcagcg gccccgcggc cggcgtattc agcagtttca ggaacgctcc
      301 gccgacgacg ccggtaccga gcagggccac tgccgccgcg gcgcgcggtt tcgcggcagg
      361 cacggcctct tccacaagca ccgcgctcac gcggaaaccc gacgtttcgc ctcgccggcc
      421 tgctcggcac gcgtcaggcc ggccgcgaga tcgcgcagca ggtcgtcgcc atcctcgatg
      481 ccgaccgaca tgcgcaacag gccgtcggcg atgccggcgc ggcgccgcgc ctcgggcgcc
      541 atcgaggcgt gggtcatggt ggccgggtgc gcgatcaggc tttcgacgcc accaagcgac
      601 tcggccagcg agaagaagcg caggccatcg acgaaagcgg cgatctgcgc ctcgtcgccg
      661 tccagctcga agctcagcat ggcgccgaac ccctgctgct ggcgcgcagc cagcgcgtgg
      721 tacggattgg cggcgaggcc ggggtaatac accttgcgca ccgccgggtg cgcatccagg
      781 tacgcggcga tgcgctccgc gttttcctgg tgctggcgca ggcgcacgcc gagcgtgcgc
      841 aggccgcgca gggtgagata gctgtcgaac ggcgcgccga tgatgccgtt gcagttgccc
      901 caccacttga gcttgtcggt cagctccggc tcgcgcgcga tcaccgcgcc gccgacgacg
      961 tcgctgtggc cgttgatgta cttggtggtc gagtgcacga cgatgtcggc gcccagcgtc
     1021 aacggctgct gcagcgccgg cgacaggaag gtgttgtcga ccaccaccag cgcgccgacc
     1081 gcgtgcgcag cctgcgccac gtggcggatg tcggtgatgc gcagcagcgg attggacggc
     1141 gtctccaccc acaccagcgc cggcttcgcc gccagcccgg cggccagcgc ggccggatcg
     1201 gtgaggtcgg cgaactcgac cgtgaagcgg cccttcttcg cccacgcgtc gagcagccgc
     1261 caggtgccgc cgtagcagtc gtgtgccgcc agcacccgcg cgccggccgg caccagttcc
     1321 agcgccaatg ccaccgccgc catgccgctg gaggtcacca ccgcgccggc gccctgctcc
     1381 agctccgcca gcgcctcgcc gagcaggtcg cgggtggggt tgccgctgcg cgagtagtcg
     1441 tacgcgcgct tgcggccgaa gccggcgaag ctgtagttgg tcgacaggtg cagcgccggc
     1501 accaccgcgc cgtgctgggt gtcgctctcg atgccggcgc gcacggcgcg ggtacagggg
     1561 gcgggggtgg cgctcatgtc gttctccggg tcttcttcgt cgtgtcttct ggtcgtaggg
     1621 cgggcaccgc ccgccgccgg tgccgggcga atggcgggca gtgcccgccc tacagggcta
     1681 gcgcctcgcg cagcagcggc gcgagttgtt cgggttcttt caggaaggcg tcgtggccgt
     1741 agggcgactc gaccacttcg agcgtggccg ggccgcgcag gcggcgctgc aactcgcaca
     1801 ggtcggccag tggcaccagc cggtcggacg gaaagccgat cagcgtcgcc ggcgcggcca
     1861 cctgctcggg ctcgacctgg tgcaggtcga tcgattcgga cagggcgagg aagcgatcgg
     1921 catcgaagcg ctcgacgaaa cgccggccct ggtgctccag gtaatcctcg accgggaaat
     1981 ggaagcgttc cgcgcgctgc tcgggcgcgc cggcgaagcg gcgaccgaat tcggcgctgc
     2041 cgcgataggt ggtgatcgcc agctgccgcg ccagcgccag cgcctcgtcg acatggccgc
     2101 tgg
//
LOCUS       DASSVL010000268         4774 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_656094, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000268 DASSVL010000000
VERSION     DASSVL010000268.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 4774)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4774)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4774
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_656094"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1688)
                     /locus_tag="VFM52_04625"
     CDS             complement(<1..1688)
                     /locus_tag="VFM52_04625"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007080052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheA"
                     /protein_id="HET8764483.1"
                     /translation="MGAVDLTQFHQTFFAESMEGLDGMEAALLELDAGAIDHELVHTI
                     FRAAHSIKGGAATFGFSDVAAFTHVAESLLDEVRSERRPVTSDLIDLLLRSVDCLRTM
                     LDHTSQGRPAADASSEALRAELAQLVESGAPAPAAAPAVAAAPAPAPAASGWTIHFAA
                     KPQLLQTGNDPVRVFHELQQLGELEVLRAFVVDGAPTDFAQLDPTQGYLGWELKLAGA
                     ASRADVEAVFEWLEGDCELAIEPLAAPAVEAPVASAPVAAVTPPAPTAASAPAPAATI
                     ATGGIGHHSADAGSIRVGIDKVDALINMMGELVITQSMLSDIGANFEPSQLERLREGL
                     AQLERTTRELQESVMRIRMLPIATVFNRFPRMVRDLERKLGKQVRLEMHGEGTELDKT
                     VLEKIGDPMVHLVRNAIDHGLETPDKRRASGKGETGTLTLDAHHEGGNIIVRISDDGA
                     GLNHDAIVAKAIERGLVSADHDLSDDEIAELIFQPGFSTSAKATDLSGRGVGMDVVRR
                     NVRDLGGSVSVKSVAGQGSTFTIALPLTLAIIDGLVTTVGAERYIVPLISVVESL"
     gene            complement(1698..2060)
                     /locus_tag="VFM52_04630"
     CDS             complement(1698..2060)
                     /locus_tag="VFM52_04630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008439020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HET8764484.1"
                     /translation="MAKILAVDDSASMRGMVAFTLRGAGHEVTEAEDGQKALDAAGAG
                     KFDLVLADVNMPVMDGLSMVKALRAKADYQGVPILMLTTESDTNKKMEGKAAGATGWL
                     VKPFDPEKLLATVNRVLG"
     gene            complement(2075..2389)
                     /locus_tag="VFM52_04635"
     CDS             complement(2075..2389)
                     /locus_tag="VFM52_04635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008439019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043856 - anti-sigma factor antagonist
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="STAS domain-containing protein"
                     /protein_id="HET8764485.1"
                     /translation="MGGKRAARQGGAVTVALPADCRIGAQAALHAELVPALRASAVEL
                     DGSAVERADTAALQQLWLFRRALEQHGGTLAWKGTSQALADAAATLGLTTILQLPAAR
                     PA"
     gene            2579..3724
                     /locus_tag="VFM52_04640"
     CDS             2579..3724
                     /locus_tag="VFM52_04640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007506929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-length control protein FliK"
                     /protein_id="HET8764486.1"
                     /translation="MIIQPTSLAALTWAGAAAGSTAQSWRIGSELTARPLGVGPNGLQ
                     VLQVGALTVEADVVGMQLPLPDAFQVRVQSLGEQPQLQVLVPPGADPALQQGLRDRLP
                     LQNGYAPLLATLAALSQRPVLRQLSPAVRLALAQLDQAQRTPAEVTSGEGLRQAILRS
                     GLFLESRLANPHDAPLPPLQEDWKGALLRVVSVLGERLATSPAATPGDVAPPLLQRGV
                     QAQARAPLPALAADIGLLLDRLQGDAKAALARTEVAQLQASTSPVPAWMIEIPLQGEG
                     GSDVLQLQLEYARNDAEGGRGWNLGFALDLPALGPVQGELQLRGPRLAVRLWAARAQT
                     VQRLEHQFTALRERLAACGVLLDQLSCQLGLPEPRGGYSAVLLRATA"
     gene            3724..3975
                     /locus_tag="VFM52_04645"
     CDS             3724..3975
                     /locus_tag="VFM52_04645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007080056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis protein"
                     /protein_id="HET8764487.1"
                     /translation="MATPAPTRRVSLRLESDGMPKPLAPESLAALRARAAAQGIPLHP
                     DPQIAALLAGLRLRDDVPVLLYAATASVLAALYDAAEDH"
     gene            complement(3969..4331)
                     /locus_tag="VFM52_04650"
     CDS             complement(3969..4331)
                     /locus_tag="VFM52_04650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015448490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2802 domain-containing protein"
                     /protein_id="HET8764488.1"
                     /translation="MRLDVVVLIPVGVLLVLAVLQGAVLLRLWRRSGRLQARLDALWQ
                     RTAGTEVPTSMLMAALDRIEQQLSQAQQSPPPGRSWELAQQLAREGADAEQLVARCGL
                     SREEANLLLKMHATDAAQ"
     gene            complement(4321..4758)
                     /locus_tag="VFM52_04655"
     CDS             complement(4321..4758)
                     /locus_tag="VFM52_04655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007506943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheW"
                     /protein_id="HET8764489.1"
                     /translation="MTFRIGTQLYAAQLAEVSEVIRDGSLTPVPGASPDLLGVRQLRG
                     RIVPVMDGRRRLGLAAGEPAVDPATVRIVLLVQGGQTFGLKVDAIGELVDSTGSDIAP
                     PPAGRAARADDPVNGVLAWQGGFVALLDVRRLCRMDEGATDAA"
BASE COUNT          620 a         1762 c         1695 g          697 t
ORIGIN      
        1 agcgactcca ccaccgagat cagcggcacg atgtagcgct cggcgccgac cgtggtgacc
       61 aggccgtcga tgatggccag ggtcagcggc agcgcgatgg tgaaggtgct gccctgtccg
      121 gccacactct tcacgctcac gctgccgccg agatcgcgca cgttgcggcg cacgacgtcc
      181 atgcccacgc cgcgccctga caaatcggta gccttggccg aggtggagaa ccccggctgg
      241 aaaatcagtt cggcgatctc gtcgtcgctc aggtcgtggt cggcgctgac cagcccgcgc
      301 tcgatcgcct tggcgacgat ggcgtcgtgg ttgaggcccg cgccgtcgtc gctgatgcgc
      361 acgatgatgt tgccgccctc gtggtgcgcg tcgagcgtca gcgtgccggt ttcgcccttg
      421 ccgctggcgc ggcgcttgtc cggcgtttcc aggccgtggt cgatcgcgtt gcgcaccagg
      481 tgcaccatcg ggtcgccgat cttttccagc accgtcttgt ctagctcggt gccttcgccg
      541 tgcatctcca gcctgacctg cttgccgagc ttgcgctcca ggtcgcgcac catgcgcggg
      601 aaacggttga acacggtggc gatcggcagc atgcggatgc gcatcacgct ttcctgcagc
      661 tcgcgcgtgg tgcgttcgag ctgggccagg ccttcgcgca ggcgttcgag ctgcgagggc
      721 tcgaagttcg cgccgatgtc gctcagcatc gactgggtga tgaccagctc gcccatcatg
      781 ttgatcagcg cgtcgacctt gtcgatgccg acgcggatcg agccggcgtc ggcgctgtgg
      841 tggccgatgc cgccggtggc gatggtggcc gccggcgccg gcgcactggc ggcggtgggc
      901 gccggcggtg tcaccgccgc gacgggcgcg ctggcgacgg gcgcctcgac agcgggtgcc
      961 gccagcggtt cgatcgccag ttcgcaatcg ccttcgagcc actcgaacac ggcctcgacg
     1021 tcggcgcgcg acgcggcgcc ggccagcttg agctcccagc cgaggtagcc ctgcgtggga
     1081 tcgagctggg caaaatcggt gggcgcgccg tcgaccacga aggcgcgcag cacttccagc
     1141 tcaccaagct gctgcagctc gtggaacacg cgcaccggat cgttgccggt ctgcagcaat
     1201 tgcggtttcg cggcgaagtg gatcgtccag ccgctggcgg ccggtgccgg cgcgggggct
     1261 gcggcaaccg ccggcgccgc ggccggcgcg ggcgcgccgg attccaccag ttgcgcgagc
     1321 tcggcgcgca gcgcctcgct gctggcgtcg gcggccgggc gaccctggct ggtgtggtcg
     1381 agcatggtgc gcaggcagtc gaccgagcgc agcaggaggt cgatcaggtc ggacgtgacc
     1441 ggccggcgct cgctgcgcac ctcgtccagc agcgactcgg cgacgtgggt gaacgcggcc
     1501 acgtcgctga agccgaacgt cgcggcgccg cccttgatcg agtgcgcggc acgaaagatc
     1561 gtgtgcacca gctcgtggtc gatggcgccg gcatcgagct ccagcaacgc cgcttccatg
     1621 ccgtccaggc cttccatgct ctcggcaaag aaggtctggt ggaactgtgt gagatcgacc
     1681 gcacccatgg tgtttcctca accgagcacg cgattgaccg tggccaggag cttctccggg
     1741 tcgaacggct tgaccagcca gccggtggcg ccggcggcct tgccttccat cttcttgttg
     1801 gtgtccgact cggtggtcag catcaggatc ggcacgccct ggtagtcggc cttggcgcgc
     1861 agcgccttga ccatcgagag gccgtccatc accggcatgt tgacgtcggc cagcaccagg
     1921 tcgaacttgc cggcgccggc ggcgtcgagc gccttctggc cgtcctcggc ctcggtcact
     1981 tcgtggcccg caccgcgcag ggtgaacgcg accatgccgc gcatcgaagc cgaatcgtct
     2041 accgcgagaa tcttcgccat gctgctacct cggttcaggc cggccgggcg gccggcagtt
     2101 gcaggatcgt cgtcaggccg agcgtcgccg cggcgtcggc cagcgcctgg ctggtgcctt
     2161 tccacgccag cgtgccgccg tgttgctcga gcgcgcgccg gaacagccag agctgctgca
     2221 gggcggcggt atccgcgcgc tccaccgcgc tgccgtcgag ctcgaccgcg ctggcgcgca
     2281 gcgccggcac cagttcggca tgcagggccg cctgcgcgcc gatccggcaa tcggccggca
     2341 acgccacggt caccgctccg ccctgccttg ctgcccgctt gccgcccatg cttccgctcc
     2401 ggttgcgccc cgtggcgctg caagggctta tcggcatcgg cggctggcgc tttagagcgg
     2461 gcgggccgcg ccggcacttg caccgctgcc gtcggcgacg cttaaagttg cggcgggcgc
     2521 ggccgacaac ccggctgaca cccctgaatg cgaccgccac ccgacccgga caccgccctt
     2581 gatcatccag ccgaccagcc ttgccgccct gacctgggcc ggcgcggccg ccggcagcac
     2641 cgcgcaaagc tggcgcatcg gcagtgaact gacggcgcgc ccgctcggcg tcggcccgaa
     2701 cgggctgcag gtgctgcagg tgggtgcgct gaccgtggaa gccgacgtcg tcggcatgca
     2761 gttgccgctg cccgacgcgt tccaggtgcg ggtgcagtcg ctcggcgagc agccgcagtt
     2821 gcaggtgctg gtgccgcccg gcgcggatcc ggcgctgcag caaggcctgc gcgaccggct
     2881 gccgctgcag aacggttacg cgccgctgct ggcgacgctg gccgcgctgt cgcagcgccc
     2941 ggtgctgcgc cagctctcgc ccgccgtgcg cctggcgctg gcgcagctcg accaggcgca
     3001 gcgcacgccg gcggaagtca ccagcggcga aggcctgcgg caggcgatcc tgcgcagcgg
     3061 gctgtttctc gaatcgcgcc tggccaaccc gcacgacgcg ccgctgccgc cgctccagga
     3121 ggactggaaa ggcgcgctgc tgcgcgtcgt gagcgtgctc ggcgagcgcc tggcgacgtc
     3181 gcccgccgcg acgccgggcg acgtcgcccc gccgctgctg cagcgtggcg tgcaggcgca
     3241 ggcgcgcgcg ccgctgccgg cgttggccgc cgacatcggc ctgctgctcg atcgcctgca
     3301 aggcgacgcg aaagccgccc tggcgcgcac cgaagtggcg caactgcagg ccagcaccag
     3361 cccggtgccg gcgtggatga tcgaaatccc gctgcagggc gagggcggca gcgacgtgct
     3421 gcagctgcag ctggaatacg cccgcaacga cgccgagggc ggccgcggct ggaacctcgg
     3481 ctttgcgctc gacctgcccg cgctcggccc ggtgcagggc gaactgcaac tgcgcgggcc
     3541 gcgcctggcg gtgcggctgt gggccgcgcg cgcgcagacc gtgcagcggc tcgaacacca
     3601 gttcaccgcg ctgcgcgaac ggctcgccgc ctgcggcgtg ctgctcgacc agctctcctg
     3661 ccagctcggc ctgcccgagc cacgcggcgg ctacagcgcc gtgctgctgc gggccaccgc
     3721 ctgatggcca cgcccgcgcc cacccgccgc gtcagcctgc gcctggaaag cgacggcatg
     3781 ccgaagccgc tggcgccgga atcgctggcc gcgttgcgcg cgcgcgccgc cgcgcaaggc
     3841 attccgcttc accccgaccc gcagatcgcc gctttgctcg ccggcctgcg cctgcgcgac
     3901 gacgtgccgg tactgctcta cgcggccacc gcctcggtgc tcgcggcgct gtacgacgcc
     3961 gccgaggatc actgagccgc gtcggtcgcg tgcatcttca gcagcaggtt ggcctcctcg
     4021 cgcgacagcc cgcagcgggc gacgagctgc tcggcgtcgg cgccctcgcg ggcgagttgc
     4081 tgggccagtt cccacgaacg accgggtggc ggcgactgct gcgcctggct caattgctgt
     4141 tcgatccggt cgagcgcggc catcagcatc gacgtcggca cctcggtgcc ggcagtgcgt
     4201 tgccacagcg catcgaggcg cgcctgcagc cggccgctgc gccgccacag ccgcagcagc
     4261 acggcgccct gcagcaccgc gagcaccagc agcacgccga ccgggatcag caccacgaca
     4321 tcaagccgca tcggtcgccc cctcgtccat ccggcacagg cggcgcacgt cgagcagcgc
     4381 cacgaagcca ccctgccagg ccagcacgcc gttgaccggg tcgtcggcgc gcgccgcgcg
     4441 ccccgccggc ggcggcgcga tgtcgctgcc ggtgctgtcc accagctcgc cgatcgcgtc
     4501 caccttgagg ccgaaggtct ggccgccctg caccagcagc acgatgcgca ccgtcgccgg
     4561 atcgacggcc ggctcgccgg cggccaggcc gagccggcgg cggccgtcca tcaccggcac
     4621 gatgcgcccg cgcagctggc gcacgccgag caggtcgggg ctggcgccgg gcaccggggt
     4681 caggctgccg tcgcggatca cctcgctcac ctcggccagc tgcgcggcgt agagctgggt
     4741 gccgatgcga aacgtcagcc attgcgcggc ttgc
//
LOCUS       DASSVL010000269         2460 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_726891, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000269 DASSVL010000000
VERSION     DASSVL010000269.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2460)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2460)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2460
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_726891"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..657)
                     /locus_tag="VFM52_04660"
     CDS             complement(<1..657)
                     /locus_tag="VFM52_04660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020850982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5'-3' exonuclease H3TH domain-containing
                     protein"
                     /protein_id="HET8764490.1"
                     /translation="MAKLTLIDGSSYLNRAFHALPPLSNAAGEPTGALFGVVNMLRET
                     LNAKPDFAAFVIDAPGPTFRDQLYPEYKANRAPMPDDLRAQVEPMLEVVAALGLPILR
                     VPGVEADDVIGTLATQAAADGIDVEVSTGDKDFAQLVGPKILLVNTMSRTRMGRAGVI
                     EKFGVPPERIIDYLTLMGDSIDNIPGVPKCGPKTAAKWLNEYGSLDAVIAHADDVKGK
                     I"
     gene            758..1231
                     /locus_tag="VFM52_04665"
     CDS             758..1231
                     /locus_tag="VFM52_04665"
                     /inference="COORDINATES: protein motif:HMM:NF022639.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2782 domain-containing protein"
                     /protein_id="HET8764491.1"
                     /translation="MASALVLAVPAAHAQQVLAHASSVAPPPGSALPPPGINDPGEQA
                     VPLPSTGIPPSVAPAARTKDSGGDSTNVTSRTDANGDKIEEYRRGGQLIMVRVTPRHG
                     VTQIYKLDRSNGSLVRDPATGPVAPVYYDVYKWGGPKKPASSAAETPASAGSGGR"
     gene            complement(1247..1978)
                     /locus_tag="VFM52_04670"
     CDS             complement(1247..1978)
                     /locus_tag="VFM52_04670"
                     /EC_number="2.5.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008265275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043295 - glutathione binding [Evidence
                     IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase"
                     /protein_id="HET8764492.1"
                     /translation="MRYELYYWPGVQGRGEFVRLALEDAGADYVDVARLPARAGGGTA
                     KLLQMLDAPTAGHPALAPPFLKAGRRLIGQTANILLYLGPSLLLAPHDEAGRLWNHQL
                     QLTITDLVAEVHDTHHPIAGSLYYEDQREEAVRRSAYLRRERLPKYLGWFERVLEDNA
                     RGRHRHLVGSTTSTADLSLFQVLEGLRYAFPRAQRKLERSLPHCVALHDRVAARPGIA
                     AYLASGRRVAFNNDGIFRHYPELDA"
     gene            complement(2088..>2460)
                     /gene="purH"
                     /locus_tag="VFM52_04675"
     CDS             complement(2088..>2460)
                     /gene="purH"
                     /locus_tag="VFM52_04675"
                     /EC_number="2.1.2.3"
                     /EC_number="3.5.4.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017118421.1"
                     /note="involved in de novo purine biosynthesis; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="bifunctional
                     phosphoribosylaminoimidazolecarboxamide
                     formyltransferase/IMP cyclohydrolase"
                     /protein_id="HET8764493.1"
                     /translation="RVPDAEQLRDLLFAWHVAMFVKSNAIVFARDGATIGIGAGQMSR
                     VTSVRIAIMKADEAKLATDGCVLASDAFFPFRDNVDLAAGHGVRALIQPGGSLRDHEV
                     IDAANEHDMAMVFTGTRHFRH"
BASE COUNT          388 a          807 c          854 g          411 t
ORIGIN      
        1 gatcttgccc ttcacgtcgt cggcgtgcgc gatcacggca tccagcgaac cgtactcgtt
       61 cagccatttc gccgcagtct tgggcccgca cttcggcacg cccggaatgt tgtcgatcga
      121 atcgcccatc agcgtgaggt aatcgatgat gcgctcgggc ggcacgccaa acttctcgat
      181 cacgccggcg cgacccatgc gcgtgcgcga catggtgttg accagcagga tcttcgggcc
      241 gaccagctgt gcgaaatcct tgtcgccggt cgaaacctcg acgtcgatgc cgtcggccgc
      301 ggcctgcgtc gccaacgtgc cgatcacgtc atcggcctcc acgccgggca cgcgcaggat
      361 gggcaggccc agcgccgcga cgacttccag catcggctcg acctgcgcgc gcaagtcgtc
      421 cggcatgggt gcgcgattgg ccttgtattc ggggtacaac tggtcgcgga acgtgggacc
      481 gggtgcgtcg atcacgaacg cggcaaagtc aggcttggcg ttcagggttt cacgcagcat
      541 gttgaccacg ccgaacagtg cgccggtggg ctcgcccgcg gcattgctga gcggcggcag
      601 ggcgtgaaag gcccggttca ggtagctcga accgtcgatg agcgtcagct tggccatgtc
      661 cggattgtcg cacgcacgcc gtgcacgtgc gttgcatgta tgctggtggt gcagaccttc
      721 catgcggaga agtggcgtga aggcacggtt cttgtggatg gcgagtgcgc tggtgctggc
      781 ggtgccggca gcgcatgcgc aacaggtgct ggcgcacgcg tcttccgtgg cgccaccgcc
      841 cggttcggcc ctgccgccac ccggcatcaa cgatccaggc gagcaggcgg tgccgttgcc
      901 cagcaccggc attccgcctt cggtggcgcc ggccgcccgg accaaggaca gcggcggcga
      961 cagtaccaac gtgacgtccc gcaccgatgc caatggcgac aagatcgagg aatatcgccg
     1021 gggtggccag ttgatcatgg tgcgcgtcac gcccaggcat ggcgtcacgc agatctacaa
     1081 gctcgatcgc agcaacggca gcctggtgcg cgatcccgcc accggtccgg tggcgcccgt
     1141 ctattacgac gtctacaagt ggggcggccc caagaagccg gccagcagcg ccgccgagac
     1201 gcccgccagt gcgggatcgg gcgggcgttg accctgcgtc gcggcgtcag gcgtccagct
     1261 ccggatagtg ccgaaagatg ccatcgttgt tgaacgcgac gcgacggccg gatgccaggt
     1321 acgccgcaat gcccggccgc gcggccacgc gatcgtgcag cgcgacgcaa tggggcagtg
     1381 atcgttccag cttgcgctgg gcgcgcggaa acgcgtagcg cagcccttcg agcacctgga
     1441 ataatgacag gtcggcggtg ctggtcgtgc tgccgaccag gtggcgatgg cgtccacgcg
     1501 cattgtcttc cagcacgcgt tcgaaccagc cgaggtattt gggcagccgc tcgcgccgca
     1561 ggtacgcgct gcggcgcacg gcttcctcgc gctggtcttc gtagtacagg ctgcccgcga
     1621 tcgggtggtg ggtgtcgtgc acttcggcca cgaggtcggt gattgtcagt tgcagctggt
     1681 ggttccacag ccggcccgcc tcatcgtgcg gggccagcag caggctggga ccgaggtaca
     1741 gcaggatgtt ggcggtctgc ccgatcaggc gccgtccggc cttcaggaac ggtggcgcga
     1801 gtgccggatg cccggccgtc ggcgcgtcca gcatttgcag caattttgcc gtgccgccgc
     1861 ccgcgcgggc cggcaagcgc gcgacgtcta cgtagtccgc gccggcgtct tccagcgcca
     1921 ggcgcacgaa ttcgccgcgg ccctggacgc ccggccagta gtacagctcg taacgcacga
     1981 tggctctcct cgtgatgcag gaacccgctg actgtgcgca accttacatc gtcatcccgg
     2041 ccatggatcg gctgggaccc ggcgccgggc aaggcaagac gagtacttca gtggcgaaag
     2101 tgccgcgtgc cggtgaacac catcgccatg tcgtgctcgt tggccgcgtc gatgacctcg
     2161 tggtcgcgca gcgagccgcc cggctggatg agtgcgcgca cgccgtggcc ggcggccagg
     2221 tcgacattgt cgcggaacgg gaagaaggca tccgaggcca gcacgcagcc gtcggttgcg
     2281 agcttggctt catcggcctt catgatggcg atccggacgc tggtcacgcg gctcatctgg
     2341 ccggcgccga tgccgatcgt cgcgccgtcc ctggcgaaca cgatggcgtt ggatttcacg
     2401 aacatggcga cgtgccaggc gaacagcagg tcgcgcagct gttccgcgtc gggcacgcgc
//
LOCUS       DASSVL010000270         2587 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_966660, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000270 DASSVL010000000
VERSION     DASSVL010000270.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2587)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2587)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2587
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_966660"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1792)
                     /locus_tag="VFM52_04680"
     CDS             complement(<1..1792)
                     /locus_tag="VFM52_04680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007805443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000271 - polysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside-diphosphate sugar
                     epimerase/dehydratase"
                     /protein_id="HET8764494.1"
                     /translation="MSLRKWVAVVHPRMAVVLHDLAMAALAWLIAKWLRYAVRPEDVV
                     HFRWFEFPVVLIAQGVIFRWTGLYKGVWRFASLPDLWNIIRAVALGSVAVWLTLSMFN
                     RLEGVPRSMLVLYPVVLAVGLGGPRLLYRYWKDSRLGAAGASVVRRVLIIGADRAGEA
                     LSRDLQRNNGYAVVGFIDDRPAMAGASINGLPVLGNTAGLVDVARETAADMLLIALPN
                     AKAGEMRQVVAACAATDLPYRTIPRLEDVVAGRAQVNEIKEVAIEDLLGRETVELDWT
                     AIRETIGGRRVLVTGGGGSIGSELCRQVARLGASALTVVDHSEFNLYRITRELHAHFP
                     DLVLDGVLGSCGDEVLMRRTLADAKPQVVFHAAAYKHVPLLQDQLRAAFRNNVLGTRT
                     VADLANEAGVDAFVMSSTDKAVNPTSVMGACKRIAEIWCQNLDAHATTRYMTVRFGNV
                     LDSAGSVVPLFRQQIREGGPVTVTHPEISRYFMTIPEACQLILQAATLGSGGEIYALD
                     MGEPIRIRDLAEQMIRLAGKKPGTEIPIVYTGLRPGEKLFEELFHPQEHYSATAHAKI
                     FLAQHREVSWNLLQGLLRKADGVVAAGDDAE"
     gene            complement(1779..>2587)
                     /locus_tag="VFM52_04685"
     CDS             complement(1779..>2587)
                     /locus_tag="VFM52_04685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007508284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glycosyl transferase family 4"
                     /protein_id="HET8764495.1"
                     /translation="ATAIALAVLAGLVLVAAVGWLDDRHSLPALPRLMVQLLACALFA
                     LALLAQGLAGWWVSPLVLAGAWSINLHNFMDGIDGLLAQQAMFVAAGLGVLTWVTGHS
                     GLTVAAACLGAACLGFWLFNHAPARIFMGDAGSGAVGLLVFVFSALCAVAEPRALPAV
                     LVLSAAFVVDATLTLVSRMWRGRRWYTPHREHLYQWLARRSHSHAGVCAQYLAWNLLV
                     LAPLAWLAWGSSVLAYGAVTLAYVLTTAVWWVLKRRCLRRKASGTDDVVA"
BASE COUNT          492 a          945 c          802 g          348 t
ORIGIN      
        1 gctcggcatc gtcgccggcg gcgaccacgc catcggcctt gcgcaacagc ccctgcaaca
       61 ggttccacga cacttcgcga tgctgggcga ggaaaatctt cgcgtgcgcc gtcgcgctgt
      121 agtgctcctg cggatggaac agctcctcga acaacttctc gcccggccgc aacccggtgt
      181 acacgatcgg aatctcggtg cccggcttct tgccggccag ccggatcatc tgttcggcga
      241 ggtcgcggat acggatcggt tcgcccatgt cgagcgcgta gatctcgccg ccggaaccga
      301 gcgtggccgc ctgcaggatg agctggcagg cttccgggat ggtcatgaaa tagcgcgaga
      361 tctccggatg ggtcacggtg accggtccgc cttcgcggat ctgctggcgg aacagcggta
      421 ccaccgagcc ggccgaatcc agcacgttgc cgaagcgcac cgtcatgtag cgggtggtgg
      481 cgtgcgcatc gaggttctgg caccagatct cggcgatgcg cttgcacgcg cccatgacgc
      541 tggtcgggtt gaccgccttg tcggtggagc tcatcacgaa cgcatcgacg cccgcctcgt
      601 tcgcgaggtc ggccaccgtg cgcgtaccga gcacgttgtt gcggaacgcg gcgcgcaatt
      661 gatcctgcag cagcggcacg tgcttgtagg ccgccgcgtg gaacaccacc tgcggcttcg
      721 catcggccag cgtgcggcgc atcagcacct catcgccaca gctgccgagc acgccgtcca
      781 ggaccaggtc ggggaaatgc gcatgcaatt cgcgcgtgat ccggtacagg ttgaactcgc
      841 tgtgatcgac caccgtcaac gcactggcgc ccagccgcgc cacctgccgg cacagctccg
      901 aaccgatcga gccgccaccg ccggtcacca gcacccggcg tccaccaatg gtctcgcgga
      961 tggccgtcca atccagctcc accgtctcgc ggccgagcag atcctcgatc gcgacttcct
     1021 tgatctcgtt gacctgggcg cgcccggcca ccacgtcctc cagccgcggg atcgtgcgat
     1081 acggcaggtc ggtggccgcg caggcggcga cgacctgccg catctctccc gccttcgcgt
     1141 tcggcaacgc gatcagcagc atgtccgccg cggtctcgcg ggcaacgtcg accaggccgg
     1201 ccgtgttgcc gagcaccggc aagccgttga tgctggcacc ggccatggcc ggccgatcgt
     1261 cgatgaagcc caccaccgcg tagccgttgt tgcgctgcag gtcgcgcgac agcgcctccc
     1321 ccgcgcgatc ggcgccaatg atcagcacgc gccggacgac cgacgcgcca gcggcgccga
     1381 gccggctgtc cttccaatag cggtaaagca gccgcggccc ccccaggcca acggccagca
     1441 ccaccggata cagcaccagc atcgagcgcg gcacgccttc gagccggttg aacatcgaca
     1501 acgtgagcca gaccgcgacc gagcccaagg ctaccgcgcg gatgatgttc cacaggtccg
     1561 gcaggctggc aaaccgccac acgcccttgt acaggccggt ccagcggaaa attacgccct
     1621 gggcaatgag caccaccggg aactcgaacc agcggaagtg caccacgtct tccggtcgca
     1681 ccgcataccg caaccacttg gcgatcagcc acgcaagtgc cgccatggca aggtcgtgca
     1741 gcacgaccgc catccgcgga tggaccaccg caacccactt acgcaacgac atcatccgtc
     1801 cctgaagcct ttcgccgcag gcagcggcgc ttgagtaccc accacacggc ggtggtcagc
     1861 acataggcca acgtcacggc accataggcg agcacggatg aaccccatgc caaccacgcc
     1921 agcggtgcca gcaccagcag attccacgca agatattgcg cacacacacc ggcatggctg
     1981 tgcgaacggc gggccagcca ctggtagagg tgctcgcggt ggggagtgta ccagcggcga
     2041 ccgcgccaca tccgtgacac gagcgtcagc gtcgcatcga ccacgaaggc ggccgacagc
     2101 accagcaccg cgggcagcgc gcggggctcc gccaccgcgc acagcgcgga aaacacgaac
     2161 accagcagcc caacggcacc gctgccggca tcacccatga agattcgggc cggtgcgtga
     2221 ttgaacagcc agaatccgag gcaggccgcg ccgagacagg ccgccgccac cgtgagcccg
     2281 gagtggccgg tcacccacgt cagtacgccc aggccagccg cgacgaacat cgcctgctgc
     2341 gccagcaagc cgtcgatgcc gtccatgaag ttgtgcaggt tgatgctcca ggcaccggcg
     2401 agcaccagcg gcgacaccca ccagccggcc agcccctgcg ccagcagcgc cagcgcaaac
     2461 agcgcgcagg ccaacagttg caccatgagc cgcggcagtg ccggcaatga atggcgatcg
     2521 tccagccagc caacggctgc caccagcacc aggccggcaa gcacggccaa cgcaatggcc
     2581 gtcgcat
//
LOCUS       DASSVL010000271         3472 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1150689,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000271 DASSVL010000000
VERSION     DASSVL010000271.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3472)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3472)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3472
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1150689"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..600)
                     /locus_tag="VFM52_04690"
     CDS             complement(<1..600)
                     /locus_tag="VFM52_04690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007080061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Hpt domain-containing protein"
                     /protein_id="HET8764496.1"
                     /translation="MAAEFDNELKQDFLVEAGELVERLSEQLVDLERTPTDAELLNAV
                     FRAFHTVKGGAGFLALEPLVQLCHHAEDLLNLARGGKVTIDADYMDALLRTTDLVTGM
                     MAAVADDAPLAPAPEALLKALLPRDAAPAPAPAPAVAPVPASAPGTINDDEFEALLDK
                     MYGTNAPGAVAPAPIAPPGTGDSIGEDEFEALLDQLHGKG"
     gene            complement(613..1245)
                     /locus_tag="VFM52_04695"
     CDS             complement(613..1245)
                     /locus_tag="VFM52_04695"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019466578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009288 - bacterial-type flagellum
                     [Evidence IEA];
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0050920 - regulation of chemotaxis
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein phosphatase CheZ"
                     /protein_id="HET8764497.1"
                     /translation="MNAKPQMAMDAALPPQLRELLNSPDGPAFERALDEMVRQRELSL
                     FRALGKLARDLHDAVRRLGGDLAEEGVPGIVADARQHLQEVLEMSANAANRSLDLAER
                     LRPQAALLAERAADVLKGAPGDALAGEAATFAENCRTSLANMVVAQSWQDLSGQRIKK
                     VATFIGSVETSLLELVRLTGALAGDETAKAEVEKVTSQEDADRLLSEFGF"
     gene            complement(1242..1652)
                     /gene="cheY"
                     /locus_tag="VFM52_04700"
     CDS             complement(1242..1652)
                     /gene="cheY"
                     /locus_tag="VFM52_04700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019466577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis response regulator CheY"
                     /protein_id="HET8764498.1"
                     /translation="MDKNLKILVVDDFSTMRRLVKNLLVELGFTAALIQEADDGVNAM
                     AMLKAQPFDFVVTDWNMPNMTGIDLLRAIRAEPALKALPVLMVTSENNRDQIIAAAQA
                     GVNGYIVKPFTAATLQEKLTKVFERLAAAGGAKA"
     gene            complement(1701..2429)
                     /locus_tag="VFM52_04705"
     CDS             complement(1701..2429)
                     /locus_tag="VFM52_04705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008439151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor FliA"
                     /protein_id="HET8764499.1"
                     /translation="MNVASGYLKLSRESADELVRRHAPLVRRIAYHLMGRLPPSVDVG
                     DLIQAGMIGLLESARNFAQDKGASFETFAGIRIRGAMLDELRKSDWTPRSVHRKTREV
                     AETIRQIELETGAEAEDAEVMRRLGLSAEEYHQILADATCARLLSLTASDEGEDSGVL
                     DVADETSLGPAQSLEDAGMREALTAAITELPEREQLVMSLYYEQELNLKEIGAVLGVS
                     ESRVCQIHGQAVIRLRGKLAGWRV"
     gene            complement(2426..3370)
                     /locus_tag="VFM52_04710"
     CDS             complement(2426..3370)
                     /locus_tag="VFM52_04710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008439152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MinD/ParA family protein"
                     /protein_id="HET8764500.1"
                     /translation="MNQASGLTQMLAALAAGPASGAASTAVAHQLDGLLTAVPMPQRA
                     CRTIAVAGGKGGVGKSTVAVNLGMALAAAGRNVILLDADTGLANVDVMLGLTPARHIG
                     HLLDGECSLQDLLIPVRDGLQVVPAGSGARRLAQLSHAEHAAIIRAFDSLAEAPDYLL
                     IDTAAGLADNVTMFAAAASEVVIVVCDEPASLTDAYGLSKVLSRDFGVRRLRMVANMV
                     RNEGDARALHQKLSRVCDRFLDLSVELVGFIPHDERLRQAIKRQDAVVAAWPSAPSSL
                     AFKKLAGTVDKWKEPERAGLDRISFFAGRTAPAGEMPR"
BASE COUNT          468 a         1237 c         1203 g          564 t
ORIGIN      
        1 gcccttgccg tgcagctggt ccagcagcgc ctcgaactcg tcctcgccga tgctgtcgcc
       61 ggtgcctggc ggcgcgatcg gcgccggggc gacggcgccc ggcgcgttgg tgccgtacat
      121 cttgtccagc agcgcctcga actcgtcgtc gttgatcgtg ccgggcgccg aagccggcac
      181 gggtgccact gcgggagcgg gtgccggggc cggcgccgca tcacgcggca gcaacgcctt
      241 gagcagggct tccggcgccg gcgccagcgg cgcgtcgtcg gccaccgccg ccatcatgcc
      301 ggtgaccagg tcggtggtcc tgagcagcgc gtccatgtag tcggcgtcga tcgtgacctt
      361 gccgccgcgc gcgaggttca gcagatcctc ggcgtggtgg cacagctgca ccagcggttc
      421 gagcgccagg aacccggcgc cgcccttcac cgtgtggaac gcgcggaaca ccgcgttcag
      481 cagctcggcg tcggtcggcg tgcgttcgag gtcgaccagc tgctcggaca ggcgctcgac
      541 cagctcgccg gcctcgacga gaaaatcctg tttcagttcg ttgtcgaatt ccgcggccac
      601 ggcatgcgcc cgtcagaacc cgaactcgct caggaggcgg tcggcgtctt cctggctggt
      661 gaccttctcg acctcggcct tggcggtctc gtcgccggcc agcgcgccgg tcaggcgcac
      721 cagttcgagc agcgaggttt cgaccgagcc gatgaaggtg gcgactttct tgatgcgctg
      781 gccggacagg tcctgccacg actgcgccac caccatgttg gcgaggctgg tgcggcagtt
      841 ctcggcgaac gtcgcggcct cgccggccag ggcgtcgccc ggcgcgccct tgagcacgtc
      901 ggcggcgcgc tcggccagca gcgcggcctg cggacgcagg cgctcggcca ggtccaggct
      961 gcggttggcg gcgttcgcgc tcatctcgag cacttcctgc aggtgctggc gcgcgtcggc
     1021 gacgatgccc ggcacgcctt cctcggcgag gtcgccgccg agccggcgca ccgcgtcgtg
     1081 caggtcgcgc gccagcttgc ccagcgcgcg gaacaggctc agctcgcgct ggcgcaccat
     1141 ctcgtccagc gcgcgctcga acgccgggcc atccgggctg ttgagcagct cgcgcaattg
     1201 cggcggcagc gccgcgtcca tcgccatctg cggtttcgca ttcatgcttt ggctccaccc
     1261 gcggcggcca gacgctcgaa caccttggtg agcttttcct gcagcgtggc cgcggtgaac
     1321 ggcttgacga tgtagccatt cacgccggcc tgggcggcgg cgatgatctg gtcgcggttg
     1381 ttctcggagg tgaccatcag caccggcagc gccttcagcg ccggctcggc gcggatcgcg
     1441 cgcaggaggt cgatgccggt catgttcggc atgttccagt cggtcaccac gaagtcgaac
     1501 ggctgcgcct tgagcatggc catcgcgttg acgccatcgt cggcctcctg gatcagcgcg
     1561 gcggtgaagc cgagctcgac cagcaggttc ttgacgaggc gccgcatggt ggaaaagtcg
     1621 tccaccacga ggatcttgag gttcttgtcc aaacgtctgc tccgctggtg cggcccgcca
     1681 gggcccgggg atggggtggg tcagacgcgc cagccggcga gcttgccgcg cagccggatc
     1741 acggcctggc cgtggatctg gcacacgcgc gactcgctca cgccgagcac cgcgccgatc
     1801 tccttgaggt tcaactcctg ctcgtagtac aggctcatca ccagctgctc gcgctcgggc
     1861 agctcggtga tcgccgcggt cagcgcctcg cgcatgccgg cgtcctccag gctttgcgcc
     1921 ggcccgaggc tggtctcgtc ggcgacgtcg agcacgccgg aatcctcgcc ctcgtcggac
     1981 gcggtgaggc tcagcaggcg cgcgcaggtc gcgtcggcca ggatctggtg gtactcctcc
     2041 gcgctcaggc cgagccggcg catgacctcg gcgtcctccg cctcggcgcc ggtctccagc
     2101 tcgatctggc ggatggtctc ggccacctcg cgggtcttgc ggtgcaccga gcgcggcgtc
     2161 cagtcgctct tgcgcagctc gtcgagcatg gcgccgcgga tgcggatgcc ggcgaaggtc
     2221 tcgaagctgg cgcccttgtc ctgggcgaaa ttgcgcgcgg attccagcaa gccgatcatt
     2281 cctgcctgga tcaggtcacc cacgtcgacg ctgggcggca gccgccccat caggtgatag
     2341 gcgatccgcc ggaccagcgg cgcgtgccga cgtaccagtt cgtcggcgct ctcgcgggaa
     2401 agtttgagat atcccgaagc cacgttcatc tcggcatctc cccggccggg gccgtgcggc
     2461 ccgcaaaaaa ggagatacgg tcgagacccg cgcgctcggg ttccttccac ttatcgaccg
     2521 tacctgcgag tttcttgaat gccagcgacg acggcgccga tggccaggcg gcgaccaccg
     2581 catcctggcg cttgatcgcc tggcgcagac gctcgtcgtg cgggatgaaa ccgaccagct
     2641 cgacgctgag gtcgaggaag cggtcgcata cccgcgaaag cttctggtgc agcgcgcgcg
     2701 cgtcgccctc gttgcgcacc atgttcgcca ccatgcgcag ccggcgcacg ccgaaatcgc
     2761 ggctgagcac cttgctgagc ccgtaggcgt cggtcagcga ggccggctcg tcgcacacca
     2821 caatgaccac ctcggacgcc gccgcggcga acatcgtcac gttgtcggcg agcccggccg
     2881 cggtgtcgat caggaggtaa tccggcgcct cggccaggct gtcgaaggcg cggatgatcg
     2941 ccgcgtgctc ggcgtggctg agctgggcca ggcgccgcgc gccggagccg gccggcacca
     3001 cctgcaggcc gtcgcgcacc gggatcagca ggtcctgcag gctgcattcg ccatccagca
     3061 ggtggccgat gtggcgcgcc ggggtgagcc ccagcatcac gtccacgttg gccaggccgg
     3121 tgtcggcgtc gagcaggatc acgttcctgc cggccgccgc cagcgccatg ccgaggttca
     3181 ccgccaccgt gctcttgccg acgccgccct tgccgccggc gaccgcgatc gtgcggcagg
     3241 cgcgctgcgg catcggcacc gcggtcagca ggccgtcgag ctggtgcgcg accgccgtcg
     3301 acgcggcgcc ggaagccggc ccggcggcca gcgccgccag catctgggtg agcccggacg
     3361 cctgattcat tgctttcctc ccgctcatgc ttcggccatc gccagaccga aacgatcggc
     3421 catcaccctg tcatccggcg cgttgctccg cagtgattgt gcggcgcgac at
//
LOCUS       DASSVL010000272         2057 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1009335,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000272 DASSVL010000000
VERSION     DASSVL010000272.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2057)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2057)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2057
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1009335"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1588)
                     /locus_tag="VFM52_04715"
     CDS             complement(<1..1588)
                     /locus_tag="VFM52_04715"
                     /EC_number="4.1.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008207891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008964 - phosphoenolpyruvate carboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA];
                     GO_process: GO:0015977 - carbon fixation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxylase"
                     /protein_id="HET8764501.1"
                     /translation="MSNASRSTDSAVPDAPLRNDVRRLGALVGHMLAEQAGAGFLAEV
                     ERIRTAAIARRQEASPLAGLADPLRGLASDHAEALARAFATYFQAVNSAERVHRIRRR
                     RDSQRAGGTPQPESLLDVLARLKAAGVGADELITWLHRLHVEPVFTAHPTEAVRASLL
                     EKEQAIVRALVDGFDGGRTPQEQQEDEARMYMALSSGWQTAEASPVQPSVQDEREHVD
                     FYLADPLYRIVPALYEALAQALHDVYGAQPALPKLLRFASWVGGDMDGNPSVGADTIE
                     ECLHAQRGLVLARYREDVAALGRLLSQTEDRVAVADALMQRLADYRARFPQAAASIRP
                     RHADMPYRCLLHLMDARLALTEDDAEGAYAVERLLCRVRSFGFHLARLDVRQDSRVHD
                     DALAALLADPDWATRDGAARAERLRPYASGQAVFPHSEDANATSLQAVFATLRDSRTS
                     HGHDATGLYIISMARSAADVLAVLALARHGGLVAPSPLREEATPPPSPLWGEGRGEGR
                     SLPEAVSHAGRNSNASASTRP"
     regulatory      1742..1821
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF01057"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="S-adenosyl-L-homocysteine riboswitch; Derived by
                     automated computational analysis using gene prediction
                     method: cmsearch."
                     /bound_moiety="S-adenosyl-L-homocysteine"
                     /db_xref="RFAM:RF01057"
     gene            1895..>2057
                     /locus_tag="VFM52_04720"
     CDS             1895..>2057
                     /locus_tag="VFM52_04720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019398507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylhomocysteinase"
                     /protein_id="HET8764502.1"
                     /translation="MNAVTPIPADAANKVRDIGLADFGRKELDIAEHEMPGLMSIRRK
                     YAPGAPLKGV"
BASE COUNT          311 a          730 c          720 g          296 t
ORIGIN      
        1 aggggcgggt gctcgcggaa gcattgctat tgcggcccgc atggctgaca gcttccggca
       61 aactccgccc ctcaccccga ccctctcccc aaaggggaga gggtggtggg gttgcctctt
      121 cccggagggg agagggagca accaatcccc catgcctcgc cagcgccagc accgccagca
      181 cgtcggcggc cgagcgcgcc atgctgatga tgtacaggcc ggtggcgtcg tggccgtggc
      241 tcgtgcggct gtcgcgcagg gtggcgaaca ccgcctgcag cgaggtggcg ttggcgtcct
      301 cgctgtgcgg gaacaccgct tggccgctgg cgtacggacg tagccgttcg gcccgtgcgg
      361 cgccgtcgcg cgtggcccag tcggggtcgg ccagcagcgc cgccagcgcg tcgtcgtgca
      421 cgcgcgaatc ctgccgcacg tcgagccgcg ccaggtggaa accgaagctg cgcacgcggc
      481 acaacagccg ttccaccgcg taggcgccct cggcgtcgtc ctcggtcagg gcgaggcggg
      541 catccatgag gtgcagcagg cagcggtacg gcatatcggc gtggcgcggg cggatgcttg
      601 ccgcggcctg cggaaaacgc gcgcggtagt cggcaaggcg ctgcatcagg gcgtccgcca
      661 ccgccacccg atcctcggtc tggctgagca ggcggccgag cgcggccacg tcctcgcggt
      721 agcgcgccag taccaggccg cgctgcgcgt gcaggcactc ctcgatggtg tcggcgccta
      781 cggacgggtt gccgtccatg tcgccgccga cccagctcgc aaagcgcagc agtttcggca
      841 gggcgggctg ggcgccatac acgtcgtgca gtgcctgcgc gagcgcctcg tacagcgccg
      901 gcacgatgcg atacagcgga tcggcgagat agaaatccac gtgctcgcgc tcgtcctgca
      961 cgctcggctg caccggcgag gcctcggccg tctgccagcc ggagctgagc gccatgtaca
     1021 tgcgcgcctc gtcttcctgc tgctcctggg gcgtgcgccc accgtcgaaa ccgtcgacca
     1081 gcgcgcgcac gatcgcctgt tccttttcca gcagcgaggc gcgcaccgct tcggtcggat
     1141 gggcggtgaa caccggctcc acgtgcagcc ggtggagcca ggtgatcagc tcgtcggcgc
     1201 ccacacccgc cgccttgagc ctcgcaagca cgtccagcag cgactccggc tgcggcgtgc
     1261 cgccggcgcg ctgggagtca cgccggcggc ggatgcggtg cacgcgctcg gcgctgttga
     1321 ccgcctggaa ataggtggcg aacgcacggg ccagcgcctc ggcgtgatcg gacgccaatc
     1381 cgcgcagtgg atcggcgaga ccggcaagcg gggaggcctc ctggcgtcgc gcgattgctg
     1441 cggtgcgtat gcgttccacc tccgcgagga aaccggcgcc ggcctgctcg gcaagcatgt
     1501 ggccaaccag cgcgccaagc cggcgcacat cgttgcgcag cggcgcgtcg ggcacggcgg
     1561 aatcggtact gcgggaagca ttcgacacag cgtcacctcg caggagcgga gttccaagcc
     1621 taacgcaagc acagcgattt tgtgcatcgc ggcaaattac tttttcgcaa atggacgtcc
     1681 gtatgcggcg gccgcaagcc acggcggtac gcgccacggt gcgccgctat acttccccgt
     1741 tcccgtcgag gggcgctgcg accacggcaa tcgaccgtgg ccaggctcgg cggaacctga
     1801 ctgcaacggc gcccggtttg tcgcactgca ccgcctggcg tgtgctgcgc ggcaccggcc
     1861 tcgcggccgg ccatctcatc aaaccggagt acgcatgaac gctgtcaccc ccatccccgc
     1921 cgacgccgcc aacaaggtgc gcgacatcgg cctcgccgat ttcggccgca aggagctgga
     1981 catcgccgag cacgagatgc ccggcctgat gtcgatccgc cgcaagtacg cgccgggcgc
     2041 cccgctcaag ggcgtgc
//
LOCUS       DASSVL010000273         2234 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1094176,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000273 DASSVL010000000
VERSION     DASSVL010000273.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2234)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2234)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2234
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1094176"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            112..>2234
                     /locus_tag="VFM52_04725"
     CDS             112..>2234
                     /locus_tag="VFM52_04725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015448461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1631 domain-containing protein"
                     /protein_id="HET8764503.1"
                     /translation="MNDAYEPSKPKVVPLGPRIEAATGERVGELLNGVRGTAGKRLQQ
                     CVANLFEHVDDALFDLAEKAENNATQTHYFDGMREVRKRRPAIERAFLARVNHELGTL
                     AGRSAGEAAGGALPVELSLVGDADLEESLAITSMSSKHESRLSRVLYAVNQRLAVICG
                     GRKIDDASNPIGPAELAQAFRLALKELNADLRVKLLIYKLFDRYVLSTLEELYAEINA
                     QLARAGVLPRVAYPSAGGHAPGATGMRPPATGAATATVAEEAIDPATSELLQTLHSLF
                     VARRGSTRGLAGGTTDAGGPPPSANELLGALSLLQTQLAATGGATPADMEPVEYRPVT
                     AAELKDQLLAQLGALRGSRPNQVASVDEDTIDLVGMLFEFILEDHTLPAEMQAMLARL
                     QIPYLKAAILDRKLFSHRQHPARRLLDALAEQAKGWSRDSDRDGHLYDTVKRIVHQLL
                     HDFDDDLAIFDRLLAELQQFIDTNRRRSDLIEQRAAETARGREKLDQARRRAAREIIE
                     RIDGRHLPPLANEVLTRAWANHLVLVLLRQGEDSPEFRDALHFVNDFIASTQPVKDEP
                     ARRQLRQLLPGIVRALRHGLANIAFQPQDTERLLAQLRDWYGHQLGEPVRNEPAHAAA
                     PPPVPQAVIPESIQPIAEPAPEPEELPDEAVMVATDSPEWHQVEALQPGVWLEFQLPD
                     EPMVRAKLSWISPMSGRYLFVNRRGL"
BASE COUNT          379 a          823 c          725 g          307 t
ORIGIN      
        1 gaccatccgg gcaggcggcg ccgccacgat ccaggggtgg gttctgtgca cgcggtccgc
       61 gcggcacggg ccttgctgcg atatattgca agtcgaactg ccggtgtggc catgaacgac
      121 gcctacgaac cttccaagcc caaggtcgtg ccccttgggc cgcgtatcga ggccgccacc
      181 ggcgaacggg tgggggaatt gctcaacggc gtgcgcggca ccgctggcaa gcgcctgcag
      241 cagtgcgttg ccaacctgtt cgagcatgtc gacgacgcct tgttcgacct cgccgagaag
      301 gccgagaaca acgccaccca aacgcattat ttcgacggca tgcgcgaggt gcgcaagcgg
      361 cgtccggcga tcgagcgtgc attcctggca cgggtgaacc acgagctcgg cacgcttgcc
      421 ggccggtccg ccggtgaagc ggcgggcggt gcgttgccgg tcgagctgtc gctggtcggt
      481 gacgccgacc tcgaggagtc gctggccatc accagcatga gcagcaagca cgagagccgg
      541 ttgtcgcgcg tgctctatgc cgtcaaccag cggttggccg tcatctgcgg cggccgcaag
      601 atcgacgatg ccagcaaccc gatcggcccg gccgagctgg cgcaggcgtt tcgtctcgcg
      661 ctcaaggagc tcaacgccga cctgcgcgtg aagctgctga tctacaagct gttcgaccgc
      721 tacgtgctgt cgacgctgga agagttgtac gccgagatca acgcacaact ggctcgcgcc
      781 ggcgtgctgc cacgcgtggc gtacccgtcc gccggcggcc acgcccctgg tgccaccggc
      841 atgcggccgc ccgccaccgg cgccgccacg gcaaccgtcg cggaagaggc catcgacccc
      901 gccaccagcg agctcctgca gaccctgcac agcctcttcg tcgcgcgccg cggcagcacg
      961 cgcggccttg ccggcggcac caccgatgcg ggcggcccac caccttcggc caacgaactg
     1021 ctgggcgcgc tgagcctgtt gcaaacccag ctcgccgcca ccggcggcgc cacgccggcc
     1081 gacatggaac cggtcgaata ccgcccggtc accgcggccg agctcaagga ccagctgctc
     1141 gcccagctcg gcgcgctgcg cggcagccgg cccaaccagg tggccagcgt cgacgaagac
     1201 accatcgacc tcgtgggcat gctgttcgaa ttcatcctcg aggaccacac cttgccagcg
     1261 gagatgcagg ccatgctggc ccgcctgcag atcccgtacc tcaaggcggc gatcctcgac
     1321 cgcaagctgt tctcgcaccg gcaacacccg gcgcggcgac tgctcgacgc attggcggaa
     1381 caggccaagg gctggtcgcg cgattccgac cgcgacggcc acctgtacga cacggtcaag
     1441 cgcatcgtcc accagctgct gcacgacttc gacgacgacc tcgccatctt cgaccgcctg
     1501 cttgccgagt tgcagcagtt catcgacacc aaccgccggc gttccgacct catcgaacag
     1561 cgcgccgccg aaaccgcacg cggccgcgag aaactcgacc aggcgcgtcg gcgcgccgcc
     1621 cgcgagatca tcgaacgcat cgacggccga cacctgccgc cactcgccaa cgaggtgctg
     1681 acgcgcgcct gggccaacca cctggtgctc gtgctgctgc gccagggcga ggattcgccc
     1741 gagttccgcg atgcgctgca cttcgtcaac gacttcatcg ccagcaccca gccggtgaag
     1801 gacgagccgg cgcgtcgcca gctgcggcaa ctgctgcccg gcatcgtgcg tgcgctgcgc
     1861 catggcctgg ccaacatcgc gttccagccg caggacaccg agcgcctgct ggcgcaactg
     1921 cgcgactggt acgggcacca gctcggtgag ccggtgcgca acgagccggc ccacgcggca
     1981 gcgccgcccc cggtgccgca ggcagtgatc ccggagagca tccagccaat cgcggaaccc
     2041 gcccccgagc cggaagaact gccggacgaa gccgtcatgg tggcgaccga cagccccgaa
     2101 tggcaccagg tcgaggccct gcagccgggc gtgtggctcg agttccagct gcccgacgaa
     2161 ccgatggtgc gcgccaagct gtcgtggatc agcccgatga gtgggcgcta cctgttcgtc
     2221 aaccggcgcg gcct
//
LOCUS       DASSVL010000274         2538 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_133434, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000274 DASSVL010000000
VERSION     DASSVL010000274.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2538)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2538)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2538
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_133434"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..265
                     /locus_tag="VFM52_04730"
     CDS             <1..265
                     /locus_tag="VFM52_04730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008213160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8764504.1"
                     /translation="RDGMWTEGTAQAALVYRRRGDTAAPNRLFTSIARQAAPSGFLYA
                     TPEPRVAALYSHYHHRPCLAATAWAVIAASGHNPYQPVASTVP"
     gene            342..>2538
                     /locus_tag="VFM52_04735"
     CDS             342..>2538
                     /locus_tag="VFM52_04735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007808892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 3 C-terminal
                     domain-containing protein"
                     /protein_id="HET8764505.1"
                     /translation="MTVHKTCIAALIGIALLASSAAGASANDVGRPWMNPRLTPDQRA
                     DLVLKAMTQDEKFRLIRVDFGDTENGHVMAPGALGSAGYGPAITRLGLPALQESDAGL
                     GVAKPHKLGATALPSGLATAASFDPAVAYAGGAMIGSEAHRRGFNVMLAGGVDLVRDP
                     RNGRNFEYAGEDPLLAGVIAGNAIAGIQSQHLVSTIKHYALNDLETDRTTLSANIDRA
                     AARESDLLAFEIAIATGKPGSVMCSYNRINGVYACEDDWLLNQVLKRDWHYPGFVMSD
                     WGAVHSGAKSALAGLDQESAGETFDKEVYFDQPLRAAVASGKVPQARLDDMARRILRS
                     LFADGVIDHPAIQAPIDFAADRKVAQHAEEAGAVLLRNQDALLPLSAAQSVAVIGSHA
                     DKGVLTGGGSSAVQAPQGNAVPGLPPSEWPGPRIYQPSAPLAAIEQRAHGKVAYASGD
                     DIAAAAKLAAQAKVAVVFVHQWAAESFDRPHLALSGNQDALVAAVAKANPHTIVVLEN
                     NGPVAMPWLDQVGAVLEAWYPGAGGGEAIARLLYGEVDPSGRLPLTWPRDESQLPRPG
                     IPGAGLASIGLPPQGRPAQDVNYNIEGADVGYRWYQRQRLEPLFPFGYGLTYTHFDYS
                     GFKPRVENGKLTASFTVTNRDKRAGVDVPQLYVTLPGPGEVRRLAGWCRVNLKPGESA
                     QLVATADPRLLVNFDGKRQHWQRPAGDYQLQLGHSATSFQGEGKVTLAAA"
BASE COUNT          414 a          922 c          855 g          347 t
ORIGIN      
        1 acgcgacggc atgtggaccg aaggcaccgc gcaagccgcg ctcgtctacc ggcgccgtgg
       61 cgacacggct gcgccgaacc ggctgttcac ctccatcgcc aggcaggcgg caccgagcgg
      121 gtttctctat gccacgcccg agccgcgcgt cgccgcgctg tattcccact accaccaccg
      181 cccctgcctc gcggccacgg cgtgggccgt gatcgctgcc agcggtcaca atccgtacca
      241 gccggtggcg agtacggtgc catgaccccc tttcgccgcg cgcggccacg ccagcgcgac
      301 gagcgcgctt gctgcccaca cctcgccatc aagagaacga catgactgtt cacaagacct
      361 gtatcgctgc attgatcggc atcgccctgc tggcatccag tgccgccggc gcgagcgcaa
      421 acgacgtggg gcgcccgtgg atgaatccca ggctgacgcc cgaccagcgc gccgacctcg
      481 tgctgaaggc gatgacccag gacgagaagt tccggctgat ccgggtggac ttcggcgaca
      541 ccgagaacgg ccatgtgatg gcgccgggcg cgctgggttc ggccggctac ggcccggcaa
      601 tcacgcggct gggcctgccg gcgctgcagg aaagcgatgc gggcctcggc gtcgccaagc
      661 cgcacaagct cggcgccacc gccctgccct cggggctggc caccgcggcc agtttcgatc
      721 cggcagtcgc gtatgccggc ggcgcgatga tcggcagcga ggcgcatcgc cgcggcttca
      781 acgtgatgct ggccggcggc gtggacctgg tgcgcgaccc gcgcaacggc cgcaacttcg
      841 aatacgcggg cgaggacccg ctgctggccg gggtgatcgc cggcaacgcc atcgccggca
      901 tccagagcca gcacctcgtc tccaccatca agcattacgc gctcaacgat ctggaaaccg
      961 accgcaccac gctgagcgcg aacatcgacc gcgccgccgc acgcgaatcg gacctgctcg
     1021 ccttcgagat cgccatcgcc accggcaagc ccggctcggt gatgtgctcg tacaaccgca
     1081 tcaacggcgt ctatgcctgc gaggacgact ggctgctcaa ccaggtgctg aagcgcgact
     1141 ggcactaccc cggcttcgtg atgtcggact ggggcgcggt gcacagcggc gcgaaatccg
     1201 cgctggccgg gctggaccag gaatccgccg gcgagacctt cgacaaggag gtgtatttcg
     1261 accagccgct gcgcgccgcg gtggcctccg gcaaggtgcc gcaggcgcgc ctcgacgaca
     1321 tggcgcggcg catcctgcgc agcctgttcg cggacggcgt gatcgaccat cccgcgatac
     1381 aggcgccgat cgatttcgcc gccgaccgca aggtggcgca gcacgccgag gaagccggcg
     1441 cagtgctgct gcgcaaccag gatgcactgc tgccgctgtc cgccgcgcaa tccgtggcgg
     1501 tgatcggcag ccatgccgac aagggcgtgc tgaccggcgg cggttcctcg gcggtgcagg
     1561 cgccgcaggg caacgcggtg ccgggcctgc cgccttccga gtggccgggc ccgcgcatct
     1621 accagccctc cgcgccattg gccgcaatcg agcagcgcgc acacggcaag gtggcgtatg
     1681 ccagcggcga cgacatcgct gccgccgcga agctggccgc gcaagcgaag gtggccgtgg
     1741 tattcgtcca ccagtgggcg gcggagagtt tcgaccgccc gcacctcgcg ctgtcgggca
     1801 accaggatgc actggtggca gccgtggcca aggccaaccc gcacaccatc gtggtgctgg
     1861 aaaacaacgg cccggtcgcg atgccgtggc tggaccaggt cggcgcggta ctcgaagcgt
     1921 ggtaccccgg tgccggcggc ggtgaggcga tcgcacggct gttgtacggc gaggtcgatc
     1981 cgtccgggcg cctgccgctg acctggccgc gcgacgagtc gcagctgccg cgcccaggca
     2041 tccccggcgc tggcctcgct tccatcggcc tgccgccgca gggccggccg gcgcaggacg
     2101 tgaactacaa catcgaaggc gccgacgtgg gctaccgctg gtaccagcgc caacgcctcg
     2161 aaccactgtt cccgttcggc tacggcctca cctacaccca tttcgactac agcggcttca
     2221 agccgcgcgt ggaaaacggc aagctcaccg cctcgttcac cgtgaccaat cgcgacaagc
     2281 gcgcgggcgt ggacgtgccg cagctctacg tgaccctgcc cggcccgggc gaagtgcggc
     2341 ggctggccgg ctggtgccgg gtcaacctga aacccggtga atccgcacaa ctcgtggcca
     2401 cggccgaccc gcgcctgctg gtgaatttcg acggcaagcg ccagcactgg cagcgccccg
     2461 ccggcgacta ccagttgcaa ctgggccact cggcaacgtc cttccagggc gaaggaaaag
     2521 tgacgctggc tgcggcca
//
LOCUS       DASSVL010000275         3337 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_641945, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000275 DASSVL010000000
VERSION     DASSVL010000275.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3337)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3337)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3337
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_641945"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..235
                     /locus_tag="VFM52_04740"
     CDS             <1..235
                     /locus_tag="VFM52_04740"
                     /EC_number="4.1.2.50"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014401697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0070497 -
                     6-carboxy-5,6,7,8-tetrahydropterin synthase activity
                     [Evidence IEA];
                     GO_process: GO:0008616 - queuosine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="6-carboxytetrahydropterin synthase"
                     /protein_id="HET8764506.1"
                     /translation="VLDFADVKAAFAPLFDQLDHHYLNEIEGLDNPTSEVLARWVFER
                     LAPRLPGLDEVVVHETCTSGARFRRADLDAPPR"
     gene            372..755
                     /locus_tag="VFM52_04745"
     CDS             372..755
                     /locus_tag="VFM52_04745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007512419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phasin family protein"
                     /protein_id="HET8764507.1"
                     /translation="MSQQFNNQFFAYTKQITDGAFKAQSLALKSLETVAGLQLKAFEQ
                     QTRDSAAFVAEALEVRDADALRTLWEKGAALSREQAERAVEVSQEIIAVTQKAAESLQ
                     SLVAEQRQAANDAVVAPAAKKAATK"
     gene            1049..1369
                     /locus_tag="VFM52_04750"
     CDS             1049..1369
                     /locus_tag="VFM52_04750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017461903.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8764508.1"
                     /translation="MTLQVLAAVITGCAFLPMGHREAVAAVAGGFTVALGTALMSVQT
                     LGRLVGGGAAFVRLLTGMLLKWAVVIGGLAVILFQYRLPPLAAVAGLVAACVVHPLAF
                     RFKG"
     gene            1373..2188
                     /gene="atpB"
                     /locus_tag="VFM52_04755"
     CDS             1373..2188
                     /gene="atpB"
                     /locus_tag="VFM52_04755"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005121454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045263 - proton-transporting ATP
                     synthase complex, coupling factor F(o) [Evidence IEA];
                     GO_function: GO:0015078 - proton transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit A"
                     /protein_id="HET8764509.1"
                     /translation="MASEPESFTDYIQHHLTFLKPHASPDGFWSVHIDSIAVSLVLGV
                     LFSLWFWLKARKVTSGVPSKGQALAELIFEFADTQVKDLFHGDRRVLGPLALTVFVWV
                     FLMNFMDLLPVDLIPTIATALGIGHFRAVPTADLNTTFAMSITVLILTIFYSFKAKGF
                     GGYTHELFTAPFGNHWALWVPNFVLNLVELLSKPISLAMRLFGNMYAGELVFILIAGL
                     FSAGAGIGGWALYGAGILSDTAWGIFHILIITIQAFIFMVLSVVYIAMAQEHH"
     gene            2268..2525
                     /gene="atpE"
                     /locus_tag="VFM52_04760"
     CDS             2268..2525
                     /gene="atpE"
                     /locus_tag="VFM52_04760"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003097235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015078 - proton transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit C"
                     /protein_id="HET8764510.1"
                     /translation="MAQVQGFTAIALGLIIGLGALGACIGIGVMGSKFLEAAARQPEL
                     APLLTGRMFLLAGLIDAAFLIGVALAMYFAVANPLLSKLAG"
     gene            2617..3087
                     /locus_tag="VFM52_04765"
     CDS             2617..3087
                     /locus_tag="VFM52_04765"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007807018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015078 - proton transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit B"
                     /protein_id="HET8764511.1"
                     /translation="MEFNATLIGEMIAFAILIWFCVHFIWPPINKAIEERQVKIAEGL
                     SAAERARAELKNADVKVADEIRKARQQASEIIDRAQQQANAVLDKARGDAVVEINRLK
                     AAAQDDIAAMAQQAREQLRERVGELAVQGASKIVQREVDAAAHKALLDQLAAEI"
     gene            3091..>3337
                     /locus_tag="VFM52_04770"
     CDS             3091..>3337
                     /locus_tag="VFM52_04770"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008437375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit delta"
                     /protein_id="HET8764512.1"
                     /translation="MAQAITLARPYARAAFEVAHAAGSLQAWSQSLAFAAAVASDPRV
                     AGFGNDPRVLPAQLVGLHLPAGVTADSPFGHFLAEMAE"
BASE COUNT          512 a         1127 c         1086 g          612 t
ORIGIN      
        1 ggtgctcgac ttcgccgacg tcaaggcggc gttcgcgccg ttgttcgacc agctcgacca
       61 ccattacctg aacgagatcg aaggcctcga caatccgacc agcgaggtgc tggcgcgctg
      121 ggtgttcgag cgcctcgcgc cgcgcctgcc gggcctggac gaggtggtgg tgcacgagac
      181 ctgcacctcc ggcgcacgct ttcggcgggc tgatcttgat gcgccgccgc gctagcacac
      241 ctcgcgcaag ttgtcgccgg tcctgaatat ttgtcgattg gtccgcccgc tgagaaaaaa
      301 atatattgca ccgcacaaaa aagcttgcta gagtgctcgc cactaaccgc atacccgacg
      361 agggcaagct catgtctcag cagttcaaca accagttttt cgcctacacc aagcagatca
      421 ccgatggtgc attcaaggcc cagtcgctgg ccctgaagag cctggagacc gttgccggcc
      481 tgcagctcaa ggcgttcgag cagcagaccc gcgactccgc cgcgttcgtc gccgaggcgc
      541 tggaagtgcg cgacgccgac gcgctgcgca ccctgtggga gaagggcgcc gcgctcagcc
      601 gcgagcaggc cgaacgtgcg gtcgaggtct cgcaggagat catcgccgtg acgcagaagg
      661 ccgccgagtc gctgcagtcg ctggtcgccg agcagcgcca ggccgcgaac gacgccgtcg
      721 tcgcgccggc cgccaagaag gccgccacca agtaagtatt tgctgttcct gtggcaccct
      781 gccgcgccgc cctccccttc ggcgcggcag tctgggtcgg atcactcccc tgatccgacc
      841 cttttctttg ggcgtgccgc gcggatcggc gtggttcggg acaagttgtc gcagccgccg
      901 agcttgtcgc tgtaaatcga cgactgatat acttttacgg attggattgc ggttcgtggc
      961 tgctgtcggt gccgcttggc gcgctgccgc gcggagaggt cgagtgctca acagtctcgt
     1021 tgccggtcgg cgcctggcct tgcgcgcagt gacgctgcag gtgctggccg cggtgatcac
     1081 ggggtgtgcg tttcttccga tggggcaccg cgaggcggtt gcagccgtcg cgggcggctt
     1141 cacggtggcg ctgggtaccg cgctgatgtc cgtgcagacg ctggggcggc tggtcggtgg
     1201 tggcgcggca ttcgtccgct tgctcaccgg gatgttgctc aaatgggcgg tggtcatcgg
     1261 cgggctcgcg gtgatcctgt tccagtacag gttgccgccg ctggcggcgg tggcgggtct
     1321 tgtggctgcc tgcgtggtcc acccgctggc gtttcgattc aagggctgag agatggctag
     1381 cgagccggaa agcttcaccg actacatcca gcaccacctg accttcctga agccgcacgc
     1441 aagtccggac gggttctggt ccgtgcacat cgactcgatc gcggtgtcgc tggtgctggg
     1501 cgtgctgttc agcctgtggt tctggctcaa ggcccgcaag gtgacttccg gcgtgccctc
     1561 gaaggggcag gcgctggccg agctcatctt cgaattcgcg gatacccagg tgaaggacct
     1621 gttccacggc gatcgtcgcg tgctcgggcc gctggccctg accgtgttcg tctgggtgtt
     1681 cctgatgaac ttcatggatc tcctgccggt cgacctgatc ccgaccatcg ccacggcact
     1741 cggcatcggc cacttccgcg cggtgcccac cgccgacctg aacaccacgt tcgcgatgtc
     1801 gatcacggtg ctcatcctca ccatcttcta cagcttcaag gccaagggct tcggcggcta
     1861 cacccacgag ctgttcaccg cgccgttcgg caaccactgg gcgctgtggg ttcccaactt
     1921 cgtgctcaac ctcgtcgagc tgctgtccaa gccgatcagc ctggccatgc gactgttcgg
     1981 caacatgtac gccggcgagc tggtgttcat cctgatcgcg ggcctgttca gcgctggcgc
     2041 cggcatcggc ggctgggcgc tgtacggtgc gggcatcctc agcgacaccg cctggggcat
     2101 cttccacatc ctgatcatca ccatccaggc cttcatcttc atggtcctgt ccgtcgtgta
     2161 catcgcgatg gcgcaggagc accactgatt ccgttcccat ccttcaacgc aaccatcgtt
     2221 ttcccgagga gaccaccgtg gaccaagtcg ccgctcacat cgttcaaatc gcccaggtgc
     2281 agggcttcac cgccattgcg ctcggcctca tcatcggcct cggtgcgctc ggcgcctgca
     2341 tcggcatcgg cgtgatgggt tccaagttcc tggaagccgc cgcccgccag ccggagctgg
     2401 ccccgctgct gaccggccgc atgttcctgc tcgccggcct gatcgacgcg gcgttcctga
     2461 tcggcgtcgc gctggcgatg tacttcgccg tcgccaaccc gctgctgtcg aagctggcgg
     2521 gctgatccac cgggcggcgg agcacgccgc tcaccgtcgg cgcgaaccgg ttccggttcg
     2581 cgccggtaac actccgtatt tgcaggtaac gcagcgatgg aattcaacgc gaccctgatc
     2641 ggcgagatga tcgccttcgc gatcctcatc tggttctgcg tgcacttcat ctggccgccg
     2701 atcaacaagg ccatcgaaga gcgtcaggtc aagatcgccg agggcctgag cgccgccgag
     2761 cgcgcccgtg ccgaactcaa gaacgccgac gtcaaggtgg ccgacgagat ccgcaaggcg
     2821 cgccagcagg cttccgagat catcgaccgc gcgcagcagc aggccaacgc cgtgctcgac
     2881 aaggcgcgcg gtgacgcagt ggtcgagatc aaccgcctga aggcggcggc ccaggacgac
     2941 atcgccgcga tggcgcaaca ggcgcgcgag cagctgcgcg agcgcgtcgg tgagctcgcg
     3001 gtgcagggcg cctcgaagat cgtccagcgc gaagtcgacg ccgcggcgca caaggcgctg
     3061 ctcgaccagc tcgcggccga gatctgatcc atggcccagg caatcactct cgcccgtccg
     3121 tacgctcgcg ccgccttcga ggtggcgcat gcggccgggt cgctgcaggc atggtcgcag
     3181 tcgctggcgt tcgccgccgc ggtggcaagc gatccgcgcg tggccggctt cggcaacgac
     3241 ccgcgggtgc tgccggcaca gctggtgggc ttgcacctgc ccgccggcgt gaccgccgac
     3301 agcccgttcg ggcacttcct cgccgagatg gccgagc
//
LOCUS       DASSVL010000276         2752 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1037510,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000276 DASSVL010000000
VERSION     DASSVL010000276.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2752)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2752)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2752
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1037510"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..315)
                     /locus_tag="VFM52_04775"
     CDS             complement(<1..315)
                     /locus_tag="VFM52_04775"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017460541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HET8764513.1"
                     /translation="MKLRPSKRQLLELLPARIVQVRGDAAGGARYLSFDDGPHAEHTL
                     QLLDLLAAHAVQASFFLVGKRVEQYPAIVERIVAAGHLVGNHSWSHEHFGRQSLGEQL
                     AEL"
     gene            complement(317..1483)
                     /locus_tag="VFM52_04780"
     CDS             complement(317..1483)
                     /locus_tag="VFM52_04780"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019465564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HET8764514.1"
                     /translation="MKVLVLTNLFPTPWDPWRGAFNRQQFERLGERHQVHVLTAVDFR
                     ERWRGTRHALRLANLDADPFTFFYPPGFARALHALCWAASLWLQRAHALRAAGYDCVL
                     ASWGYPDAVAATWIARRLRLPCVVKVHGSDLNVLATFALRRRQIGWALRHADGVVAVS
                     RALADKAVALGARPASTTVIYNGVDGALFAPGSRAEARQRLGLPADTPFVLYVGNLKA
                     SKGCLDLIDAFPALRRAQPRARLAYVGSGPCRAELLQRAAAHGCSGSVHLPGTVAHRQ
                     LGDWFRAADVLCLPSHNEGVPNVVLEAMASGTPVVATRVGGIPEVVPDYAGMLVPPHD
                     VVALADALIAAAARTWDTARIADHAGAFRWDDNINHLDRVLQRAVAARSLQRVT"
     gene            complement(1480..2595)
                     /locus_tag="VFM52_04785"
     CDS             complement(1480..2595)
                     /locus_tag="VFM52_04785"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019465565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HET8764515.1"
                     /translation="MNITHVVENLNRGGLERMVIELVREQRARGDQCQVVCVYEAGAL
                     APELAALGVPVTSCGKRRGFDPRALLRLRRAVREHRAEVLHTHNAMAHYQAVLATLGL
                     GTRCIVNSRHGMSSKRRAPRLEWFYRRALARTDAVAAVCTAARDDAVALGIVPGAKAR
                     VVPNGIRVERFAPRTARMHARLCAALGVADTARVVGTVGRLTPIKDQACLLYAFAAVQ
                     RGLADAELVLVGDGPARASLQQLAQQQGIAAHVHFLGDRGDVPELLQGFDVFVLSSRS
                     EAYSLALLEASATALPIVATDVGGNREIVHAGHTGKLVPAGDAVALAQAMLVLLCDPV
                     ARSTFGTAARRWVEAHGTLAAMAMRYAALYANPAVQP"
BASE COUNT          433 a         1028 c          938 g          353 t
ORIGIN      
        1 cagttcggcc agctgctcgc ccagcgactg gcgcccgaag tgctcgtggc tccacgaatg
       61 gttgccgacg agatgcccgg cggccacgat gcgctccacg atggccgggt actgctcgac
      121 ccgcttgccg acgaggaaaa agctggcctg caccgcgtgc gcggcgagca gatccagcag
      181 ctgcagcgtg tgctcggcgt gcggcccgtc gtcgaagctg aggtaacggg ccccgcccgc
      241 cgcgtcgccg cgcacctgca cgatgcgcgc cggcagcagt tcgagcaatt ggcgtttgga
      301 aggtcgcaat ttcacgtcac gtaacccgtt ggagcgaccg ggcggccacc gcacgctgca
      361 gcacccgatc gagatgattg atgttgtcgt cccagcgaaa ggcgccggcg tggtcggcga
      421 tccgtgccgt atcccaggta cgcgccgccg cggcgatcag cgcatccgcc agggccacca
      481 cgtcgtgcgg cggcaccagc atgccggcgt agtcgggcac cacctcgggg atgccgccca
      541 cccgggtggc caccaccggc gtgccgctcg ccatcgcctc cagcaccacg ttcggcacgc
      601 cctcgttgtg gctcggcagg cacaggacgt cggccgcccg gaaccagtcg cccaactgtc
      661 ggtgcgccac cgtccccggc aggtgaacgc tgccgctgca cccgtgcgcc gcggcacgct
      721 gcagtagttc ggcacgacag ggcccgctgc cgacgtacgc cagtcgcgcc cgcggctgcg
      781 cacgccgcaa tgccggaaac gcgtcgatca ggtcgagaca tcccttgctg gccttgaggt
      841 tgccgacgta gagcacgaat ggcgtgtcgg ccggcaaccc cagccgctgg cgcgcctccg
      901 cccgcgagcc gggggcgaac aacgcgccgt cgacgccgtt gtagatcacc gtggtcgacg
      961 ccggtcgcgc gccgagcgcc accgccttgt cggccagtgc gcggctgacc gccaccaccc
     1021 cgtccgcatg gcgcagcgcc cagccgatct ggcgccggcg caacgcaaag gtggccagta
     1081 cgttgagatc actgccatgc accttcacca cgcacggcag gcgcagccgg cgcgcgatcc
     1141 aggtggcggc caccgcatcg gggtagcccc aactggccaa cacgcagtcg tagcccgccg
     1201 cgcgcaacgc atgcgcccgc tgcagccaca gtgacgcggc ccagcacagc gcatgcagcg
     1261 cgcgcgcgaa gccgggcgga tagaagaagg tgaatgggtc ggcatcgagg tttgccagcc
     1321 gcagcgcgtg gcgcgtgccg cgccagcgct cgcggaaatc cactgcggtc agcacgtgca
     1381 cctggtggcg ctcgcccagg cgctcgaact gctggcggtt gaacgcgccg cgccacgggt
     1441 cccacggcgt ggggaacagg ttggtcagca ccaggacctt cacggttgca ccgccgggtt
     1501 ggcgtacagc gccgcgtagc gcatggccat cgccgccagc gtgccatgcg cctcgaccca
     1561 gcggcgtgcc gccgtaccga atgtggaccg cgcgacggga tcgcacagca gcaccagcat
     1621 ggcctgcgcg agcgccacgg catccccggc cggcaccaac ttgccggtgt gccccgcatg
     1681 cacgatctcg cggttgccgc cgacatcggt ggccacgatc ggcagcgcgg tcgcgctcgc
     1741 ttcgagcagg gccagcgaat acgcctcgct gcgcgaggac agcacgaaca cgtcgaagcc
     1801 ttgcaacaac tcgggcacgt cgccgcgatc gccaaggaaa tgcacgtgcg ccgcgatgcc
     1861 ctgttgctgc gccagctgct gcagtgaagc acgcgccggg ccatcgccca ccagcaccag
     1921 ctcggcatcc gccagcccgc gctgcacggc ggcgaacgcg taaagcaggc aggcttgatc
     1981 cttgatcgga gtcaggcggc ccacggtgcc caccacgcgc gcggtgtcgg caacgcccag
     2041 cgcggcgcaa agccgcgcat gcatgcgtgc ggtgcgtggc gcaaagcgtt cgacgcggat
     2101 gccgttgggt accacgcgcg ccttggcgcc cggcacgatg ccaagcgcca ccgcatcgtc
     2161 ccgcgccgcg gtgcacacgg cggccaccgc atcggtacgc gcaagcgcac gccgatagaa
     2221 ccattccagc cggggcgcac gccgcttgct gctcatcccg tgccggctgt tgacgatgca
     2281 gcgcgtgccc aggccgagcg tggccagcac ggcctggtag tgcgccatcg cgttgtgggt
     2341 gtgcagcacc tcggcgcggt gctcgcgcac cgcgcgccgc aggcgcagca gggcacgggg
     2401 atcgaacccg cggcgcttgc cacagctcgt caccggtacg cccagcgccg ccagctccgg
     2461 cgccagcgcg ccagcctcgt acacgcagac gacctgacac tggtcgcccc gcgcgcgctg
     2521 ctcgcgcacc agctcgatga ccatgcgctc cagcccgccc cgattgaggt tctcgacgac
     2581 gtgggtgatg ttcatgcacg gcctcggcag cgacggggag gcgatgacgg atcatggcgg
     2641 tggcgcatcg gcggcctcat tcgcggcgac tcgcgcgcgc gccggcccag cccagcaact
     2701 ggccgaacgc ctgtggacgc ccgccggcca ggcggcgatg caaggattgc ca
//
LOCUS       DASSVL010000277         2585 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_359885, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000277 DASSVL010000000
VERSION     DASSVL010000277.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2585)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2585)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2585
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_359885"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            20..1786
                     /locus_tag="VFM52_04790"
     CDS             20..1786
                     /locus_tag="VFM52_04790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019465948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter transmembrane domain-containing
                     protein"
                     /protein_id="HET8764516.1"
                     /translation="MSDPAKPRSARRVQALRPLWPFLKPHWRLALGWLVFLGLSSAAT
                     LTLPIAVRAIIEHGFVHADPRAINLAFIGLFAVALILAVATAGRYFCITLLGERTLAA
                     LRSALYAHVIRLDVGFFERSRVGELNSRLGSDTEVVQALVGSGVSVALRSLVMLLGAA
                     AMMVWTSPRLAGLVALVIPAVLVPIMLFGRRVQRLSRASQDRLADAAALANETLNAAP
                     AVKAYAREAIESRRYADAIARALASARSRIGMRAWLTAAVITLFFGAIALVLWTGARD
                     VLAGTLGIGVLGQFVLYAIFAAGSVAGLSEVWGDVMRAAGAMERIGELFAERAAIASP
                     PQPAALPVPPRGALRFEHVGFHYPTRPDALALHDFDLAIAPGETVALVGPSGAGKSTV
                     LALLLRFYDPQSGRITLDGIDLRALALPALRGAIALVPQETAIFAGSAADNIRFGRAE
                     ADEAAVIAAAQAAEAHEFIAALPDGYAAELGERGVRLSGGQRQRIAIARAILRDAPLL
                     LLDEATSALDAQSEAAIQQALARLEHGRTTLVIAHRLATVQRADRIVVLDGGRIVAQG
                     THTSLLAEGGLYAELARLQFVA"
     gene            complement(1831..>2585)
                     /locus_tag="VFM52_04795"
     CDS             complement(1831..>2585)
                     /locus_tag="VFM52_04795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008434046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="M28 family peptidase"
                     /protein_id="HET8764517.1"
                     /translation="VGRVDGGKYPDETVIYSAHWDHLGIGAPDAHGDRIYNGAVDNAT
                     GTAALIELGRAFAHAPQPARSVVFLAVTAEEKGLLGSEYYASHPLYPLATTVAVINMD
                     ALNPGGRARNFSISGTARLGLLDDLIAVAKQQGLYFSPDPHPEAGGFFRSDHFSFAKR
                     GVPALSFESGNDLVAGGKAAGEAAAKAYTEAHYHQPSDEWQASWSFAGMAHDLGVLYE
                     LGLQLADSRQWPNWSKDSEFRATRDATAAERR"
BASE COUNT          326 a          952 c          900 g          407 t
ORIGIN      
        1 ctcccactgc ccacagccca tgagcgaccc cgccaagcca cgctccgctc gccgcgtcca
       61 ggcgctgcgt ccgctgtggc cgttcctgaa accgcattgg cggctcgcgc tgggctggct
      121 ggtgtttctc gggttgtctt ccgccgccac gctgacgctg ccgatcgcgg tgcgcgcgat
      181 catcgagcac ggcttcgtgc acgccgatcc gcgcgcgatc aaccttgctt tcatcggcct
      241 gttcgcggtg gcgctgatcc tggcggtcgc caccgccggg cgctatttct gcatcaccct
      301 gctcggcgag cgcacgctgg cggcgttgcg cagcgcgctg tacgcgcacg tcatccggct
      361 cgacgtcggg ttcttcgagc ggagccgcgt cggcgagctg aactcgcgcc tcggcagcga
      421 cacagaagtg gtgcaggcgc tggtcggctc cggcgtgtcg gtggccctgc gcagcctagt
      481 gatgctgctc ggtgccgccg cgatgatggt atggaccagc ccgcgactgg ccggcctggt
      541 ggcgctggtg atccccgcgg tactggtgcc gatcatgctg ttcggccgcc gcgtgcagcg
      601 cctctcgcgc gccagccagg accgtctcgc cgacgccgcc gcgctggcca acgaaacctt
      661 gaacgccgcg ccggcggtca aggcgtatgc gcgcgaggcg atcgagagcc ggcgctacgc
      721 cgacgccatc gcccgcgcgc tggcttccgc gcgttcgcgc atcggcatgc gcgcgtggct
      781 caccgcggcg gtcatcacgc tgttcttcgg cgccatcgcg ctggtgctgt ggaccggcgc
      841 gcgcgacgtg ctcgccggca ccttgggcat cggcgtgctt ggccagttcg tgctgtacgc
      901 gatcttcgcc gccggctcgg tggccggctt gtcggaggta tggggcgacg tgatgcgcgc
      961 cgcgggcgcg atggaacgca tcggcgagct gttcgccgag cgcgccgcca tcgccagccc
     1021 gccgcaaccg gcggcgctgc ccgtgccgcc gcgcggggcg ctgcggttcg agcatgtggg
     1081 cttccattac ccgacgcgtc ccgatgcgct ggcgctgcac gacttcgacc tcgccatcgc
     1141 acccggcgaa accgtcgccc tggtcggccc ttccggtgcc ggcaagagca cggtgctggc
     1201 gctcttgctg cgcttctacg acccgcaatc cgggcgcatc acgctcgacg gcatcgacct
     1261 gcgcgcgttg gccttgccgg cgctgcgcgg ggcgatcgcg ctggtgccgc aggagactgc
     1321 catctttgcc ggcagcgccg ccgacaacat ccgcttcggc cgcgccgagg ccgacgaggc
     1381 cgcggtcatc gccgcagcgc aggcggccga ggcgcacgag ttcatcgccg ccctgcccga
     1441 cggctacgcg gcggaactcg gcgagcgcgg cgtgcgtctc tccggcggcc agcgccagcg
     1501 cattgccatc gcccgcgcga tcctgcgcga tgcgccgctg ttgctgctgg acgaggcgac
     1561 gtcggcgctc gatgcgcaat ccgaggccgc gatccagcag gcgctggcgc ggctcgaaca
     1621 cggccgcacc acgctggtca tcgcccaccg ccttgccacc gtgcagcgcg ccgaccgcat
     1681 cgtggtgctg gatggtggcc gcatcgtcgc ccagggcacc cacaccagcc tgctggccga
     1741 aggcggcctg tatgcggagc tggcgcggct gcagttcgtg gcctgagccc cgcgggccgg
     1801 caaccgccag gcccgcgggg gtgatccccg tcagcggcgc tcggcagccg tcgcgtcacg
     1861 cgtggcgcgg aactccgaat ccttcgacca gttcggccac tgccgcgaat cggccagctg
     1921 caggccgagc tcgtacagca cgcccaggtc gtgcgccatg ccggcaaagc tccagctcgc
     1981 ctgccactcg tcggacggct ggtggtagtg cgcctcggtg taggccttcg ccgcggcttc
     2041 gccggccgcc ttgccgccag cgacgaggtc gttgccggac tcgaatgaca gcgccggcac
     2101 gccgcgcttg gcgaacgaga aatgatcgga gcggaagaag ccgccggctt ccgggtgcgg
     2161 atcgggcgag aaatacaggc cctgctgctt cgccaccgcg atcaggtcgt ccagcagacc
     2221 cagccgcgcc gtgcccgaga tcgagaagtt gcgcgcacgg ccgcctggat tcagggcgtc
     2281 catgttgatc accgcaaccg tcgtcgccag tggatacaac gggtggctgg cgtagtactc
     2341 ggaccccagc agccccttct cctcggcggt caccgcgagg aacaccacgc tgcgcgcggg
     2401 ctgcggcgcg tgcgcaaagg cgcggccaag ctcgatcagc gccgccgtgc cagtggcgtt
     2461 gtccaccgcg ccgttgtaga tgcggtctcc gtgcgcatcc ggtgcgccga tgccgaggtg
     2521 atcccagtgc gcgctgtaga tcacggtctc atccggatac ttgccgccgt cgacgcggcc
     2581 gacga
//
LOCUS       DASSVL010000278         3056 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_514920, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000278 DASSVL010000000
VERSION     DASSVL010000278.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3056)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3056)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3056
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_514920"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            19..2607
                     /locus_tag="VFM52_04800"
     CDS             19..2607
                     /locus_tag="VFM52_04800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008210479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HET8764518.1"
                     /translation="MSTEASNPRRPSLFVAVLLALVVAALNVGLWWWGNRPHGPADWH
                     GPIGGFALSAFQRYQSPLKGDFPTDEQVNGDLKLLRGYTDNIRTYSMLQNPQIPRLAE
                     RDGLKVLASAWIDTRLENNEQEINALVAQARRYPGTITRVLVGNEVLFRNDVSPEKLM
                     AYLDRVRAALHQPVSTAEPDYIWEKYPELAQHVDFITVHLFPYWNGIPRKDAIGAVLG
                     SYNHLHQLFPNKKIVIGEIGWPSNGNRHEYADPSVSNEAIFLRQWFNVAKRDHIDYYV
                     MEAFDQPWKEQLSGRTEAYWGMFNADRQLKFPLTGPVTEDTSWPWKALAASLLALLPM
                     IWFALRFERFKLTGRLFFCALIQFSAAILVWSATLPFQFYLSWVDWTMLLLLFPAQIA
                     IIAILLINGFEFTEVLWRRKWMREAGMLRPDPPEKQPFVSIHLACYNEPPEMVQVTLD
                     SLAALDYANFEVLVIDNNTKDPAVWGPVKAYCEQLGKRFRFFHLEPWPGFKAGALNFG
                     LKETDPRAEVIAVIDADYVVRTDWLATLTGYFHDPKVAVVQCPQAHRDFQSNRFRRMT
                     AWEFDGFFRIGMHHRNERNAIIQHGTMTMVRRAALEGTGGWSEWTICEDAELGLRLMH
                     AGYELVYVDELMGKGLTPADFKAYKSQRYRWAFGAMQILKGRWNWMVKKGPLTPGQRF
                     HFLTGWFSWFADALLLIFTLMALYWTAGMIAFPYIFSLPMQLFLIPVIGFFFAKMIFG
                     IVLYRARVPCGWYDTIMASVASMGLSHAIARGILHGLTRKKTAFVVTAKKRRMGGSSF
                     AAFAPVREEMLMAVALILCIIGMAHAYGTRYIEGTLWMFILGAQSVPYLSAMFGAWIA
                     HKSGDS"
     gene            2754..>3056
                     /locus_tag="VFM52_04805"
     CDS             2754..>3056
                     /locus_tag="VFM52_04805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007511637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 1B"
                     /protein_id="HET8764519.1"
                     /translation="MLTRARSLFRAAWPWLRVPFWIGFGLFVGFVLPYALILNQRVQQ
                     RFNDLVFAVPTRVFARPLPLEAGEPLTPAALQLELTFAGYAEDGHGKLPGTWTKHGA"
BASE COUNT          477 a         1047 c          996 g          536 t
ORIGIN      
        1 gctgtcccgg ggacattctt gagtaccgaa gcttccaatc cgcgtcgtcc atcccttttt
       61 gttgcggtgc tgctggcgct ggtggtggcc gcgctcaatg tcggcctgtg gtggtggggc
      121 aaccgtccgc acggcccggc ggactggcac ggcccgatcg gcggcttcgc gctgtcggcc
      181 ttccagcgct accagagccc gctcaagggg gacttcccga ccgacgagca ggtcaacggc
      241 gacctcaagc tgctgcgcgg ctacaccgac aacatccgca cctactcgat gctgcagaac
      301 ccgcagatcc cgcgcctggc ggagcgcgac gggctcaagg tgctggccag cgcgtggatc
      361 gacacccggc tggaaaacaa cgagcaggaa atcaacgcgc tggtcgccca ggcgcggcgc
      421 taccccggca ccatcacccg cgtgctggtc ggcaacgagg tgctgttccg caacgacgtc
      481 tcccccgaaa agctgatggc gtacctggac cgcgtgcgcg cggcgctgca ccagccggta
      541 tccaccgccg agccggacta catctgggag aagtatcccg agctggcgca gcacgtggat
      601 ttcatcaccg tgcacctgtt cccgtactgg aacggcatcc cgcgcaagga cgcgatcggc
      661 gcggtgctgg gcagctacaa ccacctgcac cagctgttcc cgaacaagaa gatcgtgatc
      721 ggcgagatcg gctggccgtc caacggcaac cgccatgaat acgccgaccc gtcggtgtcg
      781 aacgaggcga tcttcctgcg ccagtggttc aacgtggcca agcgcgacca catcgactac
      841 tacgtgatgg aggcgttcga ccagccgtgg aaggagcagc tctcgggccg caccgaagcg
      901 tactggggca tgttcaacgc cgaccgccag ttgaagttcc cgctgaccgg cccggtcacc
      961 gaggacacct cgtggccgtg gaaggcgctg gccgcgagcc tgctcgcgtt gctgccgatg
     1021 atctggttcg cgctgcgctt cgagcgcttc aagctcaccg ggcggctgtt cttctgcgcg
     1081 ctgatccagt tcagcgcggc gatcctggtg tggtcggcca cgctgccgtt ccagttctac
     1141 ctgagctggg tcgactggac gatgctgctg ctgctgttcc cggcgcagat cgcgatcatc
     1201 gccatcctgc tcatcaacgg cttcgagttc accgaggtgc tgtggcggcg caagtggatg
     1261 cgcgaggccg gcatgctgcg ccccgatccg ccggagaagc agccgttcgt gtcgatccac
     1321 ctggcttgct acaacgagcc gccggagatg gtgcaggtca cgctcgattc gctggccgcg
     1381 ctcgactacg ccaacttcga agtgctggtg atcgacaaca acaccaagga cccggcggta
     1441 tggggcccgg tgaaggcgta ctgcgaacag ctcggcaagc gtttccgctt cttccacctg
     1501 gagccatggc ccggcttcaa ggccggcgcg ctcaatttcg gcctgaagga aaccgacccg
     1561 cgcgccgaag tgatcgcggt gatcgacgcc gactatgtgg tgcgcaccga ctggctagcc
     1621 acgctcaccg gctacttcca cgaccccaag gtggccgtgg tgcagtgccc gcaggcgcac
     1681 cgcgatttcc agtcgaaccg cttccgccgc atgaccgcgt gggagttcga cggcttcttc
     1741 cgcatcggca tgcaccaccg caacgagcgc aacgcgatca tccagcacgg caccatgacc
     1801 atggtgcgcc gcgccgcgct ggagggcacc ggcggttggt cggagtggac gatctgcgag
     1861 gacgccgagc tcggcctgcg cctgatgcac gccggctacg agctggtcta cgtcgacgag
     1921 ctgatgggca agggcctgac cccggccgat ttcaaggcgt acaagagcca gcgctatcgc
     1981 tgggcgttcg gcgcgatgca gatcctcaag gggcgctgga actggatggt gaagaagggc
     2041 ccgctcacgc cgggccagcg cttccacttc ctcaccggct ggttcagctg gttcgccgac
     2101 gcgctgctgc tgatcttcac cctgatggcg ctgtactgga ccgccggcat gatcgcgttc
     2161 ccgtacatct tcagcctgcc gatgcagctg ttcctgatcc cggtgatcgg cttcttcttc
     2221 gccaagatga tcttcggcat cgtgctctac cgcgcgcgcg tgccgtgcgg ctggtacgac
     2281 accatcatgg cctcggtcgc cagcatgggc ctgtcgcacg ccatcgcgcg cggcatcctg
     2341 cacggcctga cgcgcaagaa gaccgcgttc gtggtgaccg ccaagaagcg ccgcatgggc
     2401 ggttccagct tcgccgcgtt cgcgccggtg cgcgaggaga tgctgatggc cgtcgcgctg
     2461 atcctgtgca tcatcggcat ggcccacgcc tacggcacgc gctacatcga gggcacgctg
     2521 tggatgttca tcctcggcgc gcaatcggtg ccgtacctct cggccatgtt cggcgcctgg
     2581 atcgcgcaca agtcgggcga cagctgacgc gggtcgggtt catcccggtg gcgaggtgcg
     2641 tcaaggctcc ggctgaggtc cggcccgcgg gcttcggcgc ggccgttcat gcccgcgccg
     2701 gctgacacgc cctatgatcc ggtgcttatg tccacctcga taccccgccg gccttgctga
     2761 cccgcgcccg ctcgctgttc cgcgccgcgt ggccgtggct gcgcgtgccg ttctggatcg
     2821 gcttcggcct gttcgtcggc ttcgtgctgc cgtacgcgct gatcctcaac cagcgcgtgc
     2881 agcagcgctt caacgacctg gtgttcgcgg tgccgacgcg cgtgtttgcg cggccgctgc
     2941 cgctggaggc aggcgaaccg ctgacgccgg ccgcgctgca gctcgagctc acgtttgccg
     3001 gctacgccga ggacggccac ggcaagctgc ccggcacgtg gacgaagcac ggggcc
//
LOCUS       DASSVL010000279         2787 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1024130,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000279 DASSVL010000000
VERSION     DASSVL010000279.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2787)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2787)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2787
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1024130"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(341..1528)
                     /gene="ftsZ"
                     /locus_tag="VFM52_04810"
     CDS             complement(341..1528)
                     /gene="ftsZ"
                     /locus_tag="VFM52_04810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007509327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsZ"
                     /protein_id="HET8764520.1"
                     /translation="MFELVEQLAPNAVIKVIGVGGGGGNAVSHMVNSSIDGVEFICAN
                     TDAQALKSSGARTTLQLGETVTKGLGAGANPEIGRQAALEDRDRIVEVLDGADMVFIT
                     CGMGGGTGTGAAPVVAQLAKEKGILTVAVVTKPFPFEGRRRMQVALKGIEDLSQSVDS
                     LITVPNEKLLTVLGREVTLLNAFKAANDVLQGAVQGIADLITRPGLINVDFADVRTVM
                     SEMGMAMMGTGTARGDDRAQAAAEAAINNPLLENVDLSGACGILVNVTAGPNLTMREF
                     DEIGRVVHDFASEDATVVLGTALDPDLSDDVRVTVVATGLNRAVKPQLRPVAKPEMVE
                     MPQPRRILRTGTDNGIVDFAAQPEPVVTARREPAPAAKPEKEVAPGYDYLDIPAFLRR
                     QAD"
     gene            complement(1802..>2787)
                     /gene="ftsA"
                     /locus_tag="VFM52_04815"
     CDS             complement(1802..>2787)
                     /gene="ftsA"
                     /locus_tag="VFM52_04815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007809407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043093 - FtsZ-dependent cytokinesis
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="cell division protein FtsA"
                     /protein_id="HET8764521.1"
                     /translation="HLETHNSRGAAAIRDREVAAGDLDQVLESASAVAIPADRKVLYK
                     EPQEYRIDGQDGIRHPVGMSGVRLEAGVHLVTGAASAVQNITKCIQRCGLAVDDLVPA
                     AVAASKSVLTEDERELGVCVVDMGAGTTDIAIYTHGSIRYTKSLPVGGDQVTSDISQY
                     VQTPTGNAEEIKVKYGCALAQMARGEETIQVPSVGERPPRRLQRQALAQSIQARYEEI
                     FEMVQDEMRRSGYENLLAAGVVLTGGAARIEGALYLAEEVFHKMVRLGVPQHVTGATE
                     VIATPAHASAIGLLLHGSREGASGSRVIGGAMGDSVAGAIGKVRGWLTRNF"
BASE COUNT          429 a          969 c          890 g          499 t
ORIGIN      
        1 ccgaataaag tggactgtta ggtttagtta atccttccgg gtgccgagcg tgacgatcgt
       61 cacagggcgt ccggccgatg agcccgtctg accccgcaac ccccacggcg acttccgacc
      121 acgacgggga gcgcaggttc ccggccgtgg caaaaatcgg gcgggaaact gcccgcactg
      181 ccggaggacg ggagttccgg caatgcgggt cgaagaacct tccacgcccg aagcggctgt
      241 tgtggaaggt caggccatgg aagccgtgct ggtccgtcag acaggcgaac caccccggcc
      301 gctgcgccag ccatcgacat ggcgatcagg gacgatcgca ctagtccgcc tggcgacgca
      361 aaaacgccgg gatgtccaga tagtcgtaac caggcgcgac ctctttttcc ggcttggcgg
      421 ccggcgccgg ttcccggcga gcggtcacca ccggttccgg ctgggccgcg aagtccacga
      481 tgccgttgtc ggtgccggtc cggagtatcc gccgcggctg tggcatctcg accatttccg
      541 gcttggcgac gggccgcaat tgcggcttca ccgcacggtt gagcccggtc gcgactaccg
      601 tgacgcgcac gtcatcggac aggtccggat cgagtgcggt gcccagcacc acggtcgcgt
      661 cctcgctggc gaagtcgtgc accacgcggc cgatctcgtc gaactcacgc atcgtgagat
      721 tcggaccggc ggtgacgttc acaagaatgc cgcaggcacc cgagaggtcc acgttctcca
      781 gcagcgggtt gttgatcgcc gcctcggccg cggcctgcgc acgatcgtcg ccgcgggccg
      841 tgccggtgcc catcatggcc atgcccattt cgctcatcac ggtgcgcacg tcggcgaagt
      901 cgacgttgat caggcccgga cgggtgatca ggtcggcgat cccctgtacc gcgccctgca
      961 acacgtcgtt ggcggccttg aatgcattca acaaggtcac ttcgcggccg agcacggtca
     1021 gcagcttctc gttcggcacg gtgatcagcg agtcgaccga ctgcgacagg tcctcgatgc
     1081 ccttcagcgc cacctgcatg cgccggcgac cctcgaacgg gaacggcttg gtgaccaccg
     1141 ccaccgtcag gatgcccttt tccttggcga gctgcgccac caccggtgcc gcgccggtgc
     1201 cggtgccacc gcccatgccg caggtgatga acaccatatc ggcgccgtcc agcacctcga
     1261 cgatccggtc gcgatcctcg agcgcggctt gccggccgat ctccggattg gcgccggcgc
     1321 cgagaccctt ggtcaccgtt tcgccgagtt gcagcgtggt gcgtgcgccg gagcttttca
     1381 gcgcctgcgc gtcggtattg gcgcagatga attccacgcc gtcgatggat gaattgacca
     1441 tgtggctgac ggcgttgcca ccgccgccgc cgacaccgat caccttgatc accgcattgg
     1501 gtgcgagttg ttccaccagt tcgaacattt gcccgtcctc cgtgcttcga taagtcatgc
     1561 cgctgttgtc atgctgctgt cgtgatgccc ttccgtctcg gaaggttcgg tccgtcatgg
     1621 acctcggcgc cgcggcgcct tgccggttgc gtctcgtccc gaggcgcaac ccggatttct
     1681 cgcgggccac ggagggcccg ccgcgaatca agcagatcca tcgcttggtt cggcgaagcc
     1741 gagtacggac atgtgccgga cccggcgtgt ctgaacaggc cacggatggc ctgtttcaga
     1801 cttaaaaatt ccgcgtcaac caacccctca ccttgccgat cgcgccagcg acgctgtcgc
     1861 ccatcgcgcc gccgatcacg cggctgccgc tcgcgccttc gcgcgagccg tgcaacagca
     1921 gaccgatcgc cgacgcgtgc gcaggcgtcg cgatcacctc ggtcgcgccg gtaacgtgct
     1981 gcggcacgcc gaggcgcacc atcttgtgga acacctcttc ggcgaggtac agcgcacctt
     2041 cgattcgggc cgcgccgccg gtcagcacca cgccggccgc gagcaggttt tcgtatcccg
     2101 aacggcgcat ttcgtcctgc accatctcga agatttcctc gtagcgcgcc tggatcgact
     2161 gcgccagcgc ctgccgctgt agccgccgcg gcggacgctc gcccacgctc ggcacctgga
     2221 tggtttcctc gccgcgcgcc atctgcgcca gcgcgcagcc gtacttcacc ttgatttctt
     2281 cggcgttgcc ggtgggcgtc tgcacgtact gcgagatgtc cgacgtcacc tgatcgccgc
     2341 cgaccgggag cgacttggtg tagcggatcg aaccgtgggt atagatggcg atatcggtgg
     2401 tgccggcgcc catgtcgacc acgcacacgc cgagttcgcg ctcgtcctcg gtcagcacgg
     2461 acttcgaggc ggccaccgca gcgggcacca ggtcgtcgac cgccagccca cagcgctgaa
     2521 tgcatttggt gatgttctgc accgccgacg ccgcgccggt gacgaggtgc acgccggctt
     2581 ccaggcgtac gccgctcatg ccgaccgggt ggcggatgcc gtcctgaccg tcgatgcggt
     2641 attcctgcgg ctccttgtag agcaccttgc ggtcggcggg gattgccacc gcgctggccg
     2701 attccagcac ctggtcgaga tcgcccgccg cgacttcgcg atcgcggatc gcggccgcac
     2761 cgcgcgaatt gtgggtctcg agatggc
//
LOCUS       DASSVL010000280         2085 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1305836,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000280 DASSVL010000000
VERSION     DASSVL010000280.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2085)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2085)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2085
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1305836"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..248)
                     /locus_tag="VFM52_04820"
     CDS             complement(<1..248)
                     /locus_tag="VFM52_04820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019464931.1"
                     /note="catalyzes the transfer of an amino moiety;
                     preference for methionine followed by histidine and
                     phenylalanine; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine aminotransferase"
                     /protein_id="HET8764522.1"
                     /translation="MKIDTKLPKVGTTIFTVMSRLAAEHQAVNLGQGFPDFEPPQGLR
                     DALTRAMNAGKNQYAPMHGIAPLREAIAAKTERLYGHRP"
     gene            complement(283..1254)
                     /locus_tag="VFM52_04825"
     CDS             complement(283..1254)
                     /locus_tag="VFM52_04825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017463177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /protein_id="HET8764523.1"
                     /translation="MPPANAVMQDLNDLYFFAAVVEHGGFSAAGRALGVPKSRLSKRV
                     AQLEERLGVRLLQRTTRRFVVTEVGERFYAHCRAVLEEARAAQEAVDELRAEPRGVVR
                     LSCPVSLAQTVLAQVLPDFLAKYPKLQVRVLASNRRVDLLGEGYDLAIRVRTKLDTDA
                     NMVLRSFGLARVLPVASPALLDALGRPSHPEELARFPALSMQEHEGTQTWELIDAAGT
                     PVTVEVSPRLICGDFALLLEAARRGTGVAMLPESVCAPLVDRGELEVLLPAWSAPEGT
                     MHFIYPSRRGMLPGVRALVDFLAERLPAAIERQRRECAHATSAAVAA"
     gene            1395..1985
                     /gene="wrbA"
                     /locus_tag="VFM52_04830"
     CDS             1395..1985
                     /gene="wrbA"
                     /locus_tag="VFM52_04830"
                     /EC_number="1.6.5.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR01755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003955 - NAD(P)H dehydrogenase (quinone)
                     activity [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H:quinone oxidoreductase"
                     /protein_id="HET8764524.1"
                     /translation="MSVKLAVVYYSTYGTNHQMASIAAEAAKTAGAEVRLRRVAETAP
                     AAVVAGQEAWKAHAEATAQVPVATAEDMEWANAYLFSAPTRFGVQASQMRAFIDTLGP
                     LWFKGGLANKPVSAMSSAQNAHGGQEATLLSFYTTIMHWGGIIVAPGFTDPSIYQVGG
                     NPYGYSHTKDAPFTDEVKAAISHQARRLVEVAAKLA"
BASE COUNT          351 a          717 c          695 g          322 t
ORIGIN      
        1 gggcgatggc cgtacagccg ctcggtcttc gccgcgatcg cctcgcgcag cggcgcgatg
       61 ccatgcatcg gcgcgtactg gttcttgccg gcgttcatcg cgcgggtcag cgcatcgcgc
      121 agcccctgcg gcggttcgaa atcgggaaag ccctgcccca ggttcaccgc ctggtgttcg
      181 gccgcgagcc ggctcatcac cgtgaaaatc gtggtgccga ccttgggcag cttggtgtcg
      241 atcttcatca ttttgccgta tggatgtcca aacgaaagcg tatcacgcgg ccactgccgc
      301 gctggttgcg tgggcgcatt cgcgacgctg gcgctcgatc gccgccggca gccgctcggc
      361 aaggaaatcg accagcgcac gcacgccggg cagcatgccg cgccggctcg ggtagatgaa
      421 atgcatggtg ccttcgggcg cgctccaggc cggcagcagc acttccagct cgccgcggtc
      481 gaccagtggc gcgcagaccg attccggcag catcgcgacg ccggtgccgc ggcgcgcggc
      541 ttcgagcagc aacgcgaaat cgccgcagat gagccgcggg ctgacctcga ccgtgaccgg
      601 cgtgcccgcc gcatcgatca gctcccaggt ctgcgtgccc tcgtgctcct gcatcgacag
      661 cgcgggaaag cgcgccagct cctcgggatg gctcggccgg ccgagcgcat cgagcagcgc
      721 cgggctggca accggcaata cgcgcgcaag gccgaagctg cgcagcacca tgttggcgtc
      781 ggtgtcgagc ttggtgcgca cgcggatggc gaggtcgtag ccctcgccca gcagatcgac
      841 ccgccggttg ctggccagca cgcgcacctg cagcttcggg tatttcgcga ggaaatcggg
      901 caacacctgg gcaagcacgg tctgcgcgag cgacaccggg cagctcaggc gcaccacgcc
      961 gcgcggttcg gcgcgcagct cgtcgacggc ttcctgcgcg gcgcgcgcct cctccagtac
     1021 ggcacggcag tgtgcgtaga agcgctcgcc gacctcggtg accacgaagc ggcgcgtcgt
     1081 gcgctgcagg agccgtacgc caagccgttc ctccagttgc gcgacgcgct tgctgagccg
     1141 cgacttgggc acgccgagcg cgcgcccggc ggcggaaaag ccgccatgtt cgacgacggc
     1201 ggcgaagaag tacaggtcgt tgagatcctg catcacggca ttggccggtg gcatggtcgt
     1261 ttccaggcgc gaacgataag ttcaaagata cccgacttat cgaaccatcg tccggccttt
     1321 gataatggca gccctcaggc agacgaccat acgtgcccgc ctatctttcg gcttaccttt
     1381 caaggagacc ttccatgagc gtcaagcttg ccgtcgttta ctactcgacc tatggcacca
     1441 accaccagat ggccagcatc gcggccgaag ccgccaagac ggccggtgcc gaagtgcgcc
     1501 tgcgccgggt ggcggaaacc gcgccggccg ccgtggtagc cggccaggaa gcgtggaagg
     1561 cccacgccga ggccaccgcc caggtaccgg tggcgaccgc agaagacatg gagtgggcca
     1621 acgcctacct gttctccgcc ccgacccggt tcggcgtgca ggcgagccag atgcgcgcgt
     1681 tcatcgacac cctcggcccg ctgtggttca agggtgggct ggcgaacaag ccggtatcgg
     1741 cgatgtcctc ggcgcagaat gcgcacggtg gccaggaagc cacgctgctg tcgttctaca
     1801 cgacgatcat gcactggggc ggcatcatcg tggcgccggg cttcaccgac ccgtcgatct
     1861 accaggttgg cggcaacccg tacggctaca gccacaccaa ggacgccccg ttcaccgatg
     1921 aggtgaaggc cgccatcagc catcaggcac ggcgcctggt ggaagtggcc gccaagctgg
     1981 cgtgacgcca ggcaaacggc gccacgacgc cgtttgagcg gtctccgtgg gatgcgcaag
     2041 gcaaggccgg caacacgccg gccttgcctt tttcatgccc ctgcc
//
LOCUS       DASSVL010000281         4338 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_867957, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000281 DASSVL010000000
VERSION     DASSVL010000281.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 4338)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4338)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4338
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_867957"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(229..750)
                     /locus_tag="VFM52_04835"
     CDS             complement(229..750)
                     /locus_tag="VFM52_04835"
                     /inference="COORDINATES: protein motif:HMM:NF022338.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PH domain-containing protein"
                     /protein_id="HET8764525.1"
                     /translation="MHAAAPWSTLLKGISVTVVALLLGASWLLLDTLPAGPWRLVVAV
                     PPLVVLVAAAFSVRGYAVRDSVLRVQRLLWVTRIELGTLQTAATDATAGTRSLRLFGN
                     GGLFSFCGWFRNARLGRYRAFVTDWQHGVVIKASRCTVVLSPADPAGFVRALQPDRPE
                     RRPQRGPARRHVL"
     gene            889..1923
                     /gene="queA"
                     /locus_tag="VFM52_04840"
     CDS             889..1923
                     /gene="queA"
                     /locus_tag="VFM52_04840"
                     /EC_number="2.4.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007804522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA preQ1(34) S-adenosylmethionine
                     ribosyltransferase-isomerase QueA"
                     /protein_id="HET8764526.1"
                     /translation="MKKSDFDFDLPRELIAQEPLAERSASRLLVLDVPAGTHADHIFH
                     DLPDFLQPGDLLVFNDTRVLPARLYGHKESGGAVEIMLERVTGAHEAIVQLGVSHKPK
                     TGGRIVLADGSHAVLLGREEDFFRLRFESPEPLEKLLIRLGEMPLPPYIERKPDEADK
                     ERYQTVYAREPGAVAAPTAGLHFDQPLLAKLRERGVNFGYVTLHVGAGTFQPVREDEI
                     SKHHMHREWLNVGAALVEQIHRTRAAGHRVIAVGTTVVRALEAATVDGKVQPFAGETQ
                     IFIFPGYRITSIDALITNFHLPQSTLLMLVSALAGRDYMLAAYRYAVEQRYRFFSYGD
                     AMLILPGGMV"
     gene            2017..3159
                     /gene="tgt"
                     /locus_tag="VFM52_04845"
     CDS             2017..3159
                     /gene="tgt"
                     /locus_tag="VFM52_04845"
                     /EC_number="2.4.2.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008437788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008479 - tRNA-guanosine(34) queuine
                     transglycosylase activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA guanosine(34) transglycosylase Tgt"
                     /protein_id="HET8764527.1"
                     /translation="MTSLNFELLATDGAARRGRLAFPRGVVETPAFMPVGTYGSVKAM
                     TPRDLREIGAGIILGNTFHLYLRPGLEVIERFGGLHRFIGWERPILTDSGGFQVFSLA
                     HRRKLTEEGVTFASPVDGSQVFLSPEVSMRIQRTLDSDIAMAFDECTPYLVDGEPASW
                     RVASDSMELSMRWAERSRRAFLDLASPNNLFGIVQGGVFEDLRRRSAERLAAIGFEGY
                     AVGGLAVGEPEEERNRTLDHTVPLLPVNAPRYLMGVGRPEDIVAAVCRGIDMFDCVMP
                     TRNARNGFLFTATGTLRIRNAKYATDTRVIEEDCDCYACANGFSRAYLRHLDRCNEIL
                     GSQLATMHNLRHYQRLMAGLREAIAGGRLADFVAAFHARRAGAPAA"
     gene            3295..3624
                     /gene="yajC"
                     /locus_tag="VFM52_04850"
                     /pseudo
     CDS             3295..3624
                     /gene="yajC"
                     /locus_tag="VFM52_04850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007512100.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit YajC"
     gene            3719..>4338
                     /gene="secD"
                     /locus_tag="VFM52_04855"
     CDS             3719..>4338
                     /gene="secD"
                     /locus_tag="VFM52_04855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017461309.1"
                     /note="part of the preprotein secretory system; when
                     complexed with proteins SecF and YajC, SecDFyajC
                     stimulates the proton motive force-driven protein
                     translocation, and appears to be required for the release
                     of mature proteins from the extracytoplasmic side of the
                     membrane; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecD"
                     /protein_id="HET8764528.1"
                     /translation="MSEFPRWKYALVALSMIFGIIYALPNAFIPLPAVQVTANHTSTP
                     IDDALRQKVLAGLTKDRIPTGGVSVQGDHLLAEFPNADVQKNGADSIKALLGDNYTVA
                     FKLQSTVPHWLTAIGANAMPLGLDLQGGVHFLMQVDQSGVVDKLENSYADDIRNQLRA
                     RNIRYESVSRSTVAGQGIVVVVRSAEDRSKATDIINGITTGDVAGVS"
BASE COUNT          699 a         1442 c         1524 g          673 t
ORIGIN      
        1 gtaacccccg acaccggtgc agacggagcg tgcaagtggc tgattcgatg gcgctgcgct
       61 gcgggaaacc ggcgggcctc agccgacgca ccaagacggt ggaagcgcgc gggaaccatg
      121 gattgccggc gcttccgtca cagcgtgcaa cgtgcaccgt ggcttgctgc agcgccgcga
      181 tttgcggggt tcccatggcg cgctggcgcg gcgcccatcg cggtcgggct acagcacgtg
      241 gcggcgcgcc gggccgcgtt gcgggcgacg ttcgggccga tccggctgca gcgcccgcac
      301 gaagcccgcg gggtcggcgg gcgacagcac caccgtgcaa cggctggcct tgatgacgac
      361 gccgtgctgc cagtcggtga cgaacgcgcg gtagcggccc agtcgcgcgt tgcggaacca
      421 gccgcagaag gaaaacaggc cgccgttgcc gaacaggcgc agcgagcgcg tgccggcggt
      481 ggcatcggtg gcggcggttt gcagggtgcc cagttcgatg cgggtgaccc acagcagccg
      541 ctgcacccgc agcacgctgt cgcgcaccgc gtagccgcgc acgctgaagg ccgccgcgac
      601 cagcacgacc agcggcggga ccgcgacgac gagccgccat ggcccggcgg gcagcgtgtc
      661 cagcaacagc cagctcgcgc caagcagcag cgcgacgacg gtgacggaga tgcccttgag
      721 caaggtgctc cacggggcgg cggcgtgcat gggttccatg tggcgattct tgccgcggcg
      781 tgcggcgacg gcaatccgcg gcggggcgcg ccgcgcgcga taatgcgcgg ctcgggcgac
      841 gctgcacggc gcttgtgccg aaatcctttc ccttggtgaa ccccgcccgt gaaaaaatcc
      901 gatttcgatt tcgacctgcc acgcgaactg attgcgcagg aaccgctggc cgagcgctcc
      961 gccagccggc tgctggtgct cgacgtgccg gccggcacgc atgccgacca catctttcat
     1021 gacctgcccg atttcctgca gcctggcgac ctgctggtgt tcaacgacac ccgcgtgctg
     1081 ccggcgcgcc tgtacgggca caaggagagc ggcggcgccg tcgagatcat gctcgagcgc
     1141 gtcaccggcg cgcacgaggc gatcgtgcag ctcggcgtca gccacaagcc gaagaccggc
     1201 gggcgcatcg tgctggccga cggcagccat gccgtgctgc tcgggcgcga ggaggatttc
     1261 ttccggctgc gcttcgagtc gcccgagccg ctggaaaagc tgctgatccg cctgggcgag
     1321 atgccgctgc cgccgtacat cgagcgcaag cccgacgagg ccgacaagga gcgctaccag
     1381 acggtgtacg cgcgtgagcc gggcgccgtc gccgcgccca ccgccggcct gcacttcgac
     1441 cagccgctgc tggcgaaact gcgcgagcgc ggtgtgaact tcggctacgt cacgctgcat
     1501 gtcggcgccg gcaccttcca gccggtgcgc gaggacgaga tcagcaagca ccacatgcac
     1561 cgcgagtggc tgaacgtcgg cgcggcgctg gtggaacaga tccaccgcac gcgcgccgcc
     1621 gggcatcgcg tgatcgccgt cggcaccacg gtcgtgcgtg cgctcgaagc ggcgaccgtc
     1681 gacggcaagg tgcagccgtt cgccggcgag acgcagatct tcatcttccc cggctaccgg
     1741 atcaccagca tcgatgcgct catcaccaac ttccacctgc cgcaatcgac cctgctgatg
     1801 ctggtgtcgg cgctggccgg gcgcgactac atgctggccg cgtaccgcta tgcggtggag
     1861 cagcgttacc ggttcttctc gtatggcgat gcgatgttga tcttgccggg tgggatggtg
     1921 tgatgcgggt ttgcagggcg ggattcatcc cgacatcggg ggtacccaag gccgaggcca
     1981 cgggcgggcg ccacccaaac ccgcgataat ccccggatga catccctgaa tttcgaactg
     2041 ctcgccaccg acggcgcggc gcggcgcggg cgtctcgcgt ttccgcgcgg cgtggtggag
     2101 acgccggcgt tcatgccggt gggcacgtac ggctcggtca aggcgatgac gccgcgcgac
     2161 ctgcgcgaga tcggcgccgg gatcatcctc ggcaacactt tccacttgta tctgcgaccg
     2221 gggctcgagg tgatcgagcg ctttggcggg ctgcaccggt tcatcggctg ggagcggccg
     2281 atcctcaccg attcgggcgg cttccaggtg ttctcgctgg cgcaccggcg caagctcacc
     2341 gaggagggcg tgaccttcgc ctcgccggtg gatggctcgc aggtgttcct gtcgccggag
     2401 gtgtcgatgc gcatccagcg cacgctggat tcggacatcg cgatggcgtt cgacgagtgc
     2461 acgccgtacc tcgtcgatgg cgagccggcc agctggcgcg tggcgtcgga ttcgatggag
     2521 ctcagcatgc gctgggccga gcgctcgcgg cgtgcgttcc tcgaccttgc tagcccgaac
     2581 aacctgttcg gcatcgtgca gggcggggtg ttcgaggatc tgcgccggcg ctcggcggaa
     2641 cgcctggccg cgatcggctt cgagggctac gccgtcggtg ggctggcggt gggcgagccg
     2701 gaagaggagc gcaaccgcac gctcgaccac accgtgccgc tcttgccggt caacgcgccg
     2761 cgctacctga tgggcgtggg ccggccggag gacatcgtcg ccgccgtgtg ccgcggcatc
     2821 gacatgttcg attgcgtgat gcccacgcgc aacgcgcgca acggcttcct gttcaccgcc
     2881 accggcacgt tgcgcatccg caatgcgaaa tacgcgacgg atacccgcgt gatcgaggag
     2941 gattgcgact gctacgcctg cgccaacggt ttctcgcgcg cctacctgcg gcatctcgac
     3001 cgctgcaacg agatcctcgg cagccagctg gcgacgatgc acaacctgcg ccattaccag
     3061 cggctgatgg ccggcctgcg cgaggcgatc gccggcggcc ggctggcgga tttcgtcgcc
     3121 gccttccacg cccggcgcgc gggggcgcca gcggcatgat gcgagctgcg gcgggcttcg
     3181 ggcctgcgcc cgccgttgtg cgggcgtgtg aagcccatgt cataatcggg aatctttgag
     3241 cgcgcgtccg gcccgaaaac ccgtgctggc gccacaactt gcgagacgaa aacgatgagt
     3301 cttccgatgc cgatgctgct tgcgcagtcc gcggcgggcg ccgagggtgg cggcctgtcc
     3361 atgttgatca tgatggtggt gctgttcggc gccatgtatt tcatgatgat ccgcccgcaa
     3421 atgaagcggc agtaggaaca ccgcgcgatg gtttccgcgc tggcgaaggg cgacgaggtg
     3481 gtcaccaacg gcggcatcgc agggcgcgtc gaggaagtgg gcgacacctt catcacggtg
     3541 gaaatcgcgc cgaacgtcaa ggtgaagctg cagaagggcg ccgtgcagca ggtgctgccc
     3601 aagggctcgt tgaagtccgc ctgagcggcc gcacccgccg gttacccatg gtcacgcgcg
     3661 gcccggggcg gtcgcgtttc gacgttcacg atcacggacg atcgcaaggg atctacagat
     3721 gagcgagttt ccacgctgga aatacgcgct ggtggcgttg tcgatgatct tcggcatcat
     3781 ctacgcgctg cccaacgcct tcataccgct gccggcggtg caggtgacgg cgaaccacac
     3841 cagcacgccg atcgacgatg cactgcgcca gaaggtgctg gcggggctga ccaaggatcg
     3901 catcccgact ggcggcgtca gcgtgcaggg cgaccatctg ctcgccgagt tcccgaatgc
     3961 cgacgtgcag aagaacggcg ccgattcgat caaggcgctg ctcggcgaca actacaccgt
     4021 ggcgttcaag ctgcaatcca cggtgccgca ctggctgacc gcgatcggcg ccaatgcgat
     4081 gccgctcggc ctcgacctgc agggcggcgt gcacttcctg atgcaggtgg accagagcgg
     4141 cgtggtcgac aagctggaaa acagctatgc cgacgacatc cgcaaccagc tgcgcgccag
     4201 gaacatccgc tacgaatcgg tcagccgcag cacggtggcc gggcagggca tcgtggtggt
     4261 ggtgcgttcc gccgaggatc gcagcaaggc caccgacatc atcaacggca tcaccaccgg
     4321 tgacgtcgcc ggcgtgtc
//
LOCUS       DASSVL010000282         2099 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_924973, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000282 DASSVL010000000
VERSION     DASSVL010000282.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2099)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2099)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2099
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_924973"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..278)
                     /locus_tag="VFM52_04860"
     CDS             complement(<1..278)
                     /locus_tag="VFM52_04860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007507246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8764529.1"
                     /translation="MIVLDGQNALSPFRLERLNARLDALHRGVRVQAAWFVYFIDAAV
                     TPEGVLRQRLLAVLEAKDAAPEPATLWVVPRLGTISPWSSKATDILHGA"
     gene            complement(412..1185)
                     /locus_tag="VFM52_04865"
     CDS             complement(412..1185)
                     /locus_tag="VFM52_04865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007507248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsbC family protein"
                     /protein_id="HET8764530.1"
                     /translation="MLKKLLLALCIGGLSLSACAADNDAAPVAGSAVPPAAQQMVRQA
                     IRSLAANVQVDSIEPAPMPGFYQVIAAGQMLYVSTDGKYAMHGDVLDLQSKRNLGDDA
                     WARFRKAELARVPASERIVFAPPNPKYTISVFTDVNCGFCRALHEHVAAFNKEGIAVE
                     YLAWPREGLVTTAGRPTPTYTEMVSVWCAKDRKAAFTAAKEGHAPAPATCANPVKDQF
                     NLGVKLGVSGTPAIYGPDGRMLGGYVTPEQLLQALKQGG"
     gene            complement(1359..>2099)
                     /locus_tag="VFM52_04870"
     CDS             complement(1359..>2099)
                     /locus_tag="VFM52_04870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008435963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0009037 - tyrosine-based site-specific
                     recombinase activity [Evidence IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA];
                     GO_process: GO:0007049 - cell cycle [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific tyrosine recombinase XerD"
                     /protein_id="HET8764531.1"
                     /translation="VRREDISAYHGSQPAAVRSVARRQSAFRRYYAFLARNEPGFADP
                     TLLIERPKLPRSLPKALAEREIEGLLTAPDTGATLGLRDRAMLELMYASGLRVSELVE
                     LPLAALNPRQGVLRVTGKGGKDRLVPVGEEALARIGAYLAEARPALAKGRQPAALFLS
                     KRGEGMTRQMFWTLVKRYALRVGINPKRISPHVLRHSFATHLLNHGADLRALQMLLGH
                     SSLSTTQIYTLVAKEGLKRLHAQHHPRG"
BASE COUNT          308 a          740 c          732 g          319 t
ORIGIN      
        1 gcgccatgca ggatgtcggt ggccttgctc gaccacggcg agatcgtgcc cagccgcggc
       61 accacccaca gcgtggccgg ctccggcgcg gcgtccttgg cctccagcac ggccagcagg
      121 cgctggcgca gtacgccctc gggcgtcacc gcggcgtcga tgaagtagac gaaccacgca
      181 gcctgcaccc gcacgccgcg atgcagggca tccaggcggg cattgaggcg ttcgagtcgg
      241 aacggcgaaa gggcgttctg cccgtcgagg acgatcatgc ggggaacggg accgtggcgg
      301 ggaaaacgcc cattctacct catgctgcaa tacggcatcg ccgggcgcca ttccgccgga
      361 cagggggcgt cgccccctct tccgtcggct gcccgggaag cgcgagcggc ctcagccgcc
      421 ctgcttgagc gcctgcaaca actgctccgg cgtgacgtag ccgcccagca tgcgcccatc
      481 cgggccgtag atcgccgggg tgccgctgac gccgagcttc acgccgaggt tgaactggtc
      541 cttgaccggg ttggcgcagg tggccggtgc cggcgcatga ccttccttcg cggcggtgaa
      601 cgcggccttg cggtccttgg cgcaccacac cgaaaccatc tcggtgtagg tcggcgtggg
      661 tcggccggca gtggtcacca ggccttcgcg cggccacgcc agatactcca ccgcgatgcc
      721 ttccttgttg aacgcggcca cgtgttcgtg cagcgcgcgg cagaaaccgc agttgacgtc
      781 ggtgaacacg ctgatcgtgt acttcgggtt cggtggcgcg aacacgatgc gctcggaggc
      841 cggcaccctg gccagctcgg ccttgcggaa gcgtgcccag gcgtcgtcgc cgaggttgcg
      901 cttgctctgc aggtcgagca cgtcgccgtg catcgcgtac ttgccgtcgg tgctgacgta
      961 gagcatctgg ccggcggcga tcacctgata gaagcccggc atcggcgccg gctcgatcga
     1021 atcgacctgc acgttcgccg ccaggctcct gatcgcctgc cgcaccatct gctgcgccgc
     1081 cggcggcacc gccgagccgg ccaccggcgc cgcgtcgttg tccgccgcac aggcactcag
     1141 ggaaagcccg ccgatgcaca gcgccagcaa cagtttcttc aacatcgtca acctcgttcg
     1201 agccgtggcc ggcgcgctcg ccggcagcaa ctgtggattc tcgcacaggc agctgaacgc
     1261 cattcggtgc acgatgccgc agaagcgacg caccggtcgc ggcggtggtt tccgcggcac
     1321 cgccgcgcca gctgcctgga ctgggaagcc gaacccgctc acccccgcgg atgatgctgc
     1381 gcatgcagcc gcttcaggcc ttccttcgcc accagcgtat agatctgcgt ggtgctgagc
     1441 gagctgtggc cgagcagcat ctgcagcgcg cgcaggtcgg cgccgtggtt gagcaggtgg
     1501 gtggcgaagg agtggcgcag cacgtgcggc gagatgcgct tcgggttgat gcccacgcgc
     1561 agggcgtagc gtttcaccag ggtccagaac atctgccggg tcatgccttc gccgcgcttg
     1621 ctcaggaaca gcgccgccgg ctggcggcct ttggccagcg ccggccgcgc ctcggccagg
     1681 taggcaccga tgcgcgccag cgcttcctcg cccaccggca ccaggcggtc cttgccgccc
     1741 ttgccggtga cccgcagcac gccctggcgc gggttcagcg cagccagcgg cagctccacc
     1801 agctcggata cgcgcaggcc ggaggcgtac atcagctcca gcatcgcgcg gtcgcgcagg
     1861 cccagcgtgg caccggtgtc gggcgcggtc agcaggccct cgatctcgcg ttcggccagc
     1921 gccttgggca ggctgcgcgg cagcttcggc cgctcgatca gcaaggtggg gtcggcgaag
     1981 ccaggctcgt tgcgggcgag gaaggcatag tagcggcgga acgccgattg ccgccgcgcc
     2041 accgagcgca ccgcggcagg ctggctgccg tggtaggcgg agatgtcctc gcgtcgcac
//
LOCUS       DASSVL010000283         2386 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_486898, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000283 DASSVL010000000
VERSION     DASSVL010000283.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2386)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2386)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2386
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_486898"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..323)
                     /locus_tag="VFM52_04875"
     CDS             complement(<1..323)
                     /locus_tag="VFM52_04875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015447057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor"
                     /protein_id="HET8764532.1"
                     /translation="MTGLAGTFDAELLATSAREAPATLDAFLAGVERRAFRVAEINLR
                     QHEDALDAVQDAMLRLVSHYRDKPAAEWAPLFWGILRRRIVDLQRRRKVRSIVVGWLG
                     GGRDD"
     gene            462..764
                     /locus_tag="VFM52_04880"
     CDS             462..764
                     /locus_tag="VFM52_04880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008207953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P) transhydrogenase subunit alpha"
                     /protein_id="HET8764533.1"
                     /translation="MLDGFLALYIFMLAAFTGYEIIARVPVILHTPLMSGSNFVHGIV
                     LVGAMIALGHATTPFETGLGFIAVLLGAGNAAGGYVVTERMLEMFKPSAKKPGEGA"
     gene            761..2233
                     /locus_tag="VFM52_04885"
     CDS             761..2233
                     /locus_tag="VFM52_04885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008207949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)(+) transhydrogenase (Re/Si-specific)
                     subunit beta"
                     /protein_id="HET8764534.1"
                     /translation="MSWVPTLVKACYLLAALLFILGLKRMSSPRTARGGIVWAGVGML
                     VAVIATFALPDMQHRGLILVAVLIGVVTAWWTGKRVAMTAMPQMVAIYNGMGGGAAAA
                     IGAVELVAHARRSAAMVPDTAPLQLENWAADAAREAANAIAPLPTAVLVLGVLGALIG
                     AVSFSGSMIAFAKLQGWMDKRFVFPGQRVANLAVLVAAVACGAALIGNGLTLPLIGAF
                     FLLALAFGLMMTLPIGGADMPVVISLYNAFTGLAVAFEGYVLGNEAIIIAGMVVGAAG
                     TLLTQLMAKAMNRSIGNVLFGSFGAAAAGSAQEISGAQKPIDAADAAVMMAYAERVAI
                     VPGYGMAVAQAQHKVWEFAKALIDRGVKVKFAIHPVAGRMPGHMNVLLAEAGVPYDLI
                     EDMEDINAEFPNIDVALVIGANDVVNPMAKTDPASPIYGMPILDVAAAKHVIVIKRGK
                     GRGFAGIENALFYADNTRMLYGDGQAAAGQLVSELKSIDG"
BASE COUNT          350 a          787 c          881 g          368 t
ORIGIN      
        1 tcgtcgtcgc ggccgccgcc gagccagccg accacgatcg agcgcacctt gcgccgccgc
       61 tgcagatcga cgatgcgccg gcgcaggatg ccccagaaca gcggggccca ctcggcggcc
      121 ggtttgtcgc ggtagtggct gaccaggcga agcatggcgt cctgcaccgc gtccagcgca
      181 tcctcgtgct ggcgcaggtt gatctcggca acgcgaaacg cacggcgttc cacgccggcg
      241 aggaaggcgt ccagcgtcgc cggcgcctcg cgtgcgctgg tggcgagcag ctcggcgtcg
      301 aaggttccgg cgaggccggt catgccggcg tcgcccgggg catcggcctg tgcatgtccg
      361 cgctccatcg attcggtacc cgtgctcaac gttgcgggct cgcgcaggtt gaccacgcac
      421 cgtatgatgc ggcagtcacg gctgcgacgc aggggagaga catgctcgac gggttcctgg
      481 cgctatacat cttcatgctg gccgcgttca ccggctacga gatcatcgcg cgcgtgccgg
      541 tgatcctgca caccccgctg atgtccggct ccaacttcgt gcacggcatc gtgctggtgg
      601 gggcgatgat agcgctcggc cacgccacga cgccgttcga gaccgggctg ggtttcatcg
      661 ccgtactgct cggtgccggc aacgccgccg gcggctacgt ggtgaccgag cgcatgctcg
      721 aaatgttcaa gcccagcgcg aagaagccgg gagaaggcgc atgagctggg tgccgacgct
      781 ggtcaaggcg tgctacctgc tcgccgcgct gctgttcatc ctgggcctga agcgcatgag
      841 ctcgccgcgc accgcgcgcg gcggcatcgt gtgggcgggc gtgggcatgc tggtggcggt
      901 gatcgccacc ttcgcgctgc cggacatgca gcaccgcggg ctgatcctgg ttgcggtgct
      961 gatcggcgtg gtcaccgcgt ggtggaccgg caagcgcgtc gcgatgacgg cgatgccgca
     1021 gatggtggcg atctacaacg gcatgggcgg tggcgcggcg gcggcgatcg gcgcggtgga
     1081 gctcgtcgcg cacgcacggc gcagcgcggc gatggtgccg gacaccgcgc cgctccagct
     1141 ggaaaactgg gccgcggacg cggcgcgcga ggcggccaat gccatcgcgc cattgcccac
     1201 ggcggtgctg gtgctgggcg tgctcggcgc gctgatcggc gcggtgagct tctccggctc
     1261 gatgatcgcg ttcgccaagc tgcagggctg gatggacaag cgtttcgtgt ttcccggcca
     1321 gcgcgtggcg aacctggcgg tgctggtggc cgcggtggcc tgcggcgcgg ccttgatcgg
     1381 caacgggctg acgctgccgc tgatcggcgc gttcttcctg ctcgcgctgg cgttcggcct
     1441 gatgatgacg ctgccgatcg gtggcgccga catgccggtg gtgatctcgc tgtacaacgc
     1501 gttcaccggc ctggcggtgg cgttcgaggg ctacgtgctg ggcaacgagg cgatcatcat
     1561 cgccggcatg gtggtcggcg cggccggcac gctgctgacg cagctgatgg ccaaggcgat
     1621 gaaccgctcg atcggcaacg tgctgttcgg cagcttcggt gccgccgcgg ccggcagcgc
     1681 gcaggagatc agcggcgcgc agaagccgat cgacgccgcc gacgcggcgg tgatgatggc
     1741 ctatgccgag cgcgtggcca tcgtgcccgg ctacggcatg gcggtggcgc aggcgcagca
     1801 caaggtgtgg gagttcgcca aggcgctgat cgaccgcggc gtcaaggtga aattcgcgat
     1861 ccacccggtg gccgggcgca tgccggggca catgaacgtg ctgctcgccg aagccggcgt
     1921 gccgtacgac ctgatcgagg acatggagga catcaacgcc gagttcccga acatcgacgt
     1981 ggcgctggtg atcggtgcca acgacgtggt caacccgatg gcgaagaccg atcccgcctc
     2041 gccgatctac ggcatgccga tcctcgacgt ggcggcggcg aagcacgtca tcgtcatcaa
     2101 gcgcggcaag gggcgcgggt ttgccggcat cgagaacgcg ctgttctacg ccgacaacac
     2161 gcgcatgctg tacggcgacg gccaggccgc cgcgggccag ctggtgagcg agctcaagtc
     2221 gatcgacggt tgatcgtcag cgcggatgcc ggcccggccg ccacgccagc cagccggcaa
     2281 acgcggcggc cagcaggtac caggccagtt caccgggggc cagcccgatc cgcgccagtt
     2341 cgaccagcat cgccacgccg gcggtgcgca tcgcgtcgac caggcc
//
LOCUS       DASSVL010000284         2113 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_953063, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000284 DASSVL010000000
VERSION     DASSVL010000284.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2113)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2113)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2113
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_953063"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..920
                     /locus_tag="VFM52_04890"
     CDS             <1..920
                     /locus_tag="VFM52_04890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8764535.1"
                     /translation="GPPPSKLVRSAVAGLLLCALAAACTAPPPFAQLSGLILDAKLAE
                     VSGIAASHRHEDVLWVTNDGGNAARLYAINRRGAKLATYRVLGAENTDWEDLASFRLD
                     GRDWLLVADTGDNGGLRRTLQLHVFAEPERIADGVLRPAWTIVFRWPDGARDCEAVAV
                     DAARGEVLLVSKKRQPPELFSLPLRPPRGGGTLVAWPLGKLAGVPQGDKDEVAANPEL
                     ARIRSQVTAADIAPDGRTFALLTYRDVLLYARRGREDWGTALARRPAVHALPLLPQAE
                     ALAWSADGLGLYVTGEFSPAPLLYLNPGR"
     gene            994..1875
                     /locus_tag="VFM52_04895"
     CDS             994..1875
                     /locus_tag="VFM52_04895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014507017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPFH domain-containing protein"
                     /protein_id="HET8764536.1"
                     /translation="MKENPIRSLPGIPYLLGMLVLIALAVWMFVAGLGPDPDNGIRSG
                     WMLVAAIAVSVVALFTLVGLYMVEPNQAAVVSLFGKYVGTVKDTGLRWNNPFYGKRKV
                     SLRVRNFESGKLKVNELEGSPIEIAAVIVWQVLDSAEAVYNVDDYESFVHIQSESALR
                     TMATSYPYDQHEEGQVALRSHATEISQHLRDELAERLADAGVQVIDARISHLAYAPEI
                     AQAMLQRQQANAIIAARTRIVAGAVGMVEMALAELEKNGVVNLDEERKAQMVSNLLVV
                     LCGERGTQPIVNAGTLY"
     gene            1936..>2113
                     /locus_tag="VFM52_04900"
     CDS             1936..>2113
                     /locus_tag="VFM52_04900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019659309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Arc family DNA binding domain-containing
                     protein"
                     /protein_id="HET8764537.1"
                     /translation="MAEKKAYPLRINADVLAAAQRWADDELRSLNAQIEYVLRDALRK
                     AGRLKPPASTTDEDD"
BASE COUNT          333 a          782 c          708 g          290 t
ORIGIN      
        1 aggggccccc gccgtcgaag ctcgtccgtt ccgcagtggc ggggctgctg ctgtgcgcgc
       61 tcgccgccgc ctgcacggcg ccgccaccgt tcgcgcagct gtccggcctc atcctcgacg
      121 cgaagctcgc cgaggtcagc ggcatcgccg cctcgcaccg ccacgaggac gtgctctggg
      181 tgacgaacga cggcggaaac gccgcgcgcc tgtacgccat caaccggcgc ggcgcgaagc
      241 tggcgacgta ccgcgtgctc ggcgcggaga acaccgactg ggaggacctc gcgagcttcc
      301 gcctcgacgg ccgcgactgg ctgctggtcg ccgacaccgg cgacaacggc ggcctgcgcc
      361 gcacgctgca gctgcacgtc ttcgccgagc cggaacgcat cgccgacggc gtgctgcggc
      421 cggcatggac gatcgtgttc cgctggcccg acggcgcgcg cgactgcgag gcggtcgcgg
      481 tggacgcggc gcgcggcgag gtgctgctgg tgtcgaagaa gcggcagccg ccggaactgt
      541 tctcgctgcc gctgcgcccg ccgcggggcg ggggcaccct cgtcgcctgg ccgctgggca
      601 agctcgccgg cgtcccgcag ggcgacaagg acgaagtcgc cgcgaacccc gagctcgcac
      661 gcatccgcag ccaggtcacc gccgccgaca tcgcacccga cggccgcacc ttcgccctgc
      721 tgacctatcg cgacgtgctg ctgtacgcgc gccgcggccg cgaggactgg ggcaccgccc
      781 tggcgcggcg gccggccgtg catgccctgc ccctcctgcc ccaggccgag gccctggcct
      841 ggagcgccga cggcctcggc ctctacgtca cgggcgaatt cagccccgcg ccgctgctct
      901 acctcaaccc cggccgctga tccccccttg cgcgactgat atcattttga tatcaatatc
      961 ccacggccat cccggccgcc caggacccgc gccatgaaag agaaccccat ccgctccctc
     1021 cccggcatcc cctatctcct cgggatgctc gtcctgatcg cgctcgcggt ctggatgttc
     1081 gtcgccggcc tcggcccgga ccccgacaac ggcatccgtt ccggctggat gctggtcgcc
     1141 gccatcgcgg tgtcggtggt cgcgctgttc acgctggtcg gcctgtacat ggtcgagccc
     1201 aaccaggcgg ccgtggtcag cctgttcggc aagtacgtcg gcacggtgaa ggacaccggc
     1261 ctgcgctgga acaatccctt ctacggcaag cgcaaggtct cgctgcgcgt gcgcaacttc
     1321 gagagcggca agctcaaggt caacgagctc gagggcagcc cgatcgagat cgccgccgtg
     1381 atcgtgtggc aggtgctcga ctcggccgag gcggtctaca acgtcgacga ctacgagagc
     1441 ttcgtccaca tccagtccga atccgcgctg cgcacgatgg ccacgagcta tccgtacgac
     1501 cagcacgagg agggccaggt cgcgctgcgc agccatgcca ccgagatcag ccagcacctg
     1561 cgcgacgagc tcgccgagcg cctggccgac gccggcgtgc aggtgatcga cgcgcgcatc
     1621 agccacctcg cctatgcgcc ggagatcgcc caggcgatgc tgcagcggca gcaggcgaac
     1681 gcgatcatcg ccgcgcgcac gcgcatcgtc gccggcgcgg tcggcatggt cgagatggcg
     1741 ctggccgagc tggagaagaa cggcgtggtg aacctcgacg aggagcgcaa ggcgcagatg
     1801 gtcagcaacc tgctggtcgt gctctgcggc gagcgcggca cgcagccgat cgtcaacgcc
     1861 ggcacgctgt actaatcgcg catccatgcg caaaagcccg cacatccctg tgcggacttt
     1921 ccaaaagagc attacatggc agagaagaag gcctatccgc tgcgcatcaa cgccgacgtc
     1981 ctcgcggcgg cgcagcgctg ggccgacgac gagctccgca gcctcaacgc gcagatcgag
     2041 tacgtgctgc gcgacgcgct gcgcaaggct gggcggctga agccgcccgc atcgacaacg
     2101 gacgaggacg acg
//
LOCUS       DASSVL010000285         3005 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_755049, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000285 DASSVL010000000
VERSION     DASSVL010000285.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3005)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3005)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3005
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_755049"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..797)
                     /locus_tag="VFM52_04905"
     CDS             complement(<1..797)
                     /locus_tag="VFM52_04905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015446924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine recombinase"
                     /protein_id="HET8764538.1"
                     /translation="MQKMETAPSIAQADAASIEAFLERVWSEDGLADRTLAAYRSDLE
                     ALARWLAARGRTLHAATRADIAAYHGAQRVAVRSLARRQSAFHRFYAQLARDDPGFED
                     PTLLIERPRMPRSLPKALAEREIEGLLAAPDTASTLGVRDRAMLELMYASGLRVSELV
                     GLPLAALNLRQGVLRITGKGGKDRLVPVGEVALEHIGRYLADARPPLAGARQPPALFL
                     SQRGTGMTRQMFWLLVKRYAVQVGINPRRISPHVLRHSFATHLLNHGA"
     gene            796..1329
                     /locus_tag="VFM52_04910"
     CDS             796..1329
                     /locus_tag="VFM52_04910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007810174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RDD family protein"
                     /protein_id="HET8764539.1"
                     /translation="MRTMLGIARGERKPMSLPADPSPPWRRLAALVYDLLIVVAIVMV
                     VGLACQLATGGRLIATGAHVRIPWWYQALQGAVVAAYFIASWRRGGQTLGMRAWRVRV
                     SRDDGGAIGLLQAFTRLAVGAAPLALLLVEPLAGAHATAWLLAGTWTIWFACTLFDPR
                     RRALHDLAADTELRRLA"
     gene            1454..2710
                     /gene="phaZ"
                     /locus_tag="VFM52_04915"
     CDS             1454..2710
                     /gene="phaZ"
                     /locus_tag="VFM52_04915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008435968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyhydroxyalkanoate depolymerase"
                     /protein_id="HET8764540.1"
                     /translation="MLYQIHEWQRAVFGPLSHFADASAKMLNDAGNPFAQWPLTQRLA
                     AGYELMHRLGKEYEKPRFDIHQLDAYGHQIAVIERLALDTPFCQLKRFKRFSDDPATI
                     EKMKTEPTVLVVAPLSGHHATLLRDTVRTLLRDHKVYVTDWVDARMVPAAAGTFSLDD
                     YVQLIERFMREIGAAKLHVVSVCQPTVPVLAAVSLMAARGEPTPRSMVMMGGPIDPRR
                     SPTSVNDLATHRPLAWFQGNVICTVPPNYPGHGREVYPGFLQHAGFIAMNPSRHLRSH
                     WDFYQDLLRGDLEDADAHRKFYDEYNAVLDMPAKYYLGTIRTVFQQFLLPRGLWDVAG
                     ERVAPAAITKSALLTIEGELDDISGRGQTEAAHDLCRSIPAGHRAHRVIEGAGHYGIF
                     SGRRWRDVVYPQVRDFIRKFDHAARK"
BASE COUNT          451 a         1073 c         1007 g          474 t
ORIGIN      
        1 gcgccgtggt tgagcaggtg agtggcgaag gagtggcgca gcacgtgcgg cgagatgcgc
       61 ctggggttga tgcccacctg caccgcgtag cgtttcacca gcagccagaa catctgccgg
      121 gtcatgccgg tgccgcgctg gctgaggaac agcgccggtg gttggcgggc gccggccagt
      181 ggcgggcgcg catcggcgag gtaacggccg atgtgctcca gcgccacctc gcccaccggc
      241 accagccgat ccttgccgcc cttgccggtg atgcgcagca cgccctggcg caggttgagc
      301 gcggccagcg gcagcccgac cagctcggat acgcgcagcc ccgaggcgta catcagttcc
      361 agcatcgcgc ggtcacgcac gccgagcgtg ctggcggtat ccggcgccgc cagcaggcct
      421 tcgatctcgc gctcggccag tgccttgggc aggctgcgcg gcatgcgcgg acgctcgatc
      481 agcagcgtcg ggtcctcgaa gccggggtcg tcgcgcgcga gctgcgcata gaaccggtgg
      541 aacgccgact gccggcgcgc cagcgagcgc accgccaccc gctgcgcgcc gtgataggcg
      601 gcgatgtccg cgcgggtcgc cgcgtgcagc gtgcggccgc gtgcggcgag ccagcgcgcc
      661 agcgcttcga ggtcgctgcg gtacgccgcc agcgtgcggt cggccagccc gtcctccgac
      721 cacacgcgtt cgaggaacgc ctcgatgctc gcggcatcgg cctgcgcgat actgggtgct
      781 gtttccatct tctgcatgcg cacgatgctc ggcattgcgc gtggcgagcg caagccgatg
      841 agccttcctg ccgatcccag cccaccatgg cgccgccttg cggcgctggt ttacgacctc
      901 ttgatcgtgg tcgcgatcgt gatggtggtc ggccttgcct gccagctcgc aaccggcggg
      961 cggttgatcg ccaccggtgc gcacgtgcgc atcccgtggt ggtaccaggc gctgcagggc
     1021 gcggtggtgg ccgcgtattt catcgcctcg tggcgccgcg gcgggcagac gctgggcatg
     1081 cgcgcgtggc gcgtccgcgt cagccgcgac gatggcggcg cgatcggcct gttgcaggcg
     1141 ttcacccggc tggccgtcgg cgcggcgccg ctggccctgc tgctggtcga gccgctggcc
     1201 ggcgcgcacg ccacggcctg gctgctcgcc ggcacgtgga cgatctggtt tgcctgcacg
     1261 ctgttcgacc cgcgccgtcg cgcgcttcac gaccttgccg cggataccga attgcgccgg
     1321 ctcgcctgac ccggcaccgg cgcgcccggc tcaagtcctt gacattgcgg acgatcacct
     1381 gagtggtatg ccgccaatcg gcatgctgca ccgcgttaga atccgcccct tggtcccgat
     1441 gtcaggcgtc tcgatgctct accagatcca tgaatggcaa cgcgcagtgt tcggcccgct
     1501 cagccacttt gccgatgcca gcgcaaagat gctcaacgat gcaggcaacc cgttcgccca
     1561 gtggccgctg acccagcgcc tcgccgccgg ctacgagctg atgcaccggc tcggcaagga
     1621 atacgaaaag ccgcgcttcg acatccacca gctcgacgcc tacggccacc agatcgcggt
     1681 gatcgagcgc ctcgcgctgg acacgccgtt ctgccagctg aagcgcttca agcgcttcag
     1741 cgacgacccg gcgacgatcg agaaaatgaa gaccgagccg accgtgctgg tcgtcgcgcc
     1801 gctgtccggc catcacgcga cgctgctgcg cgacaccgtg cgcacgctgt tgcgcgacca
     1861 caaggtgtac gtcaccgatt gggtcgatgc gcgcatggtg ccggccgccg ccggcacctt
     1921 cagcctcgac gactacgtgc agctcatcga gcgcttcatg cgcgagatcg gcgccgcgaa
     1981 gctgcacgtg gtgtcggtgt gccagccgac cgtgccggtg ctcgccgcgg tatcgctgat
     2041 ggcggcgcgc ggcgaaccca ccccgcgcag catggtcatg atgggcgggc cgatcgaccc
     2101 gcggcgcagc ccgaccagcg tcaacgacct ggccacccac cggccgctgg catggttcca
     2161 gggcaacgtg atctgcaccg tgcccccgaa ctatcccggc cacggccgcg aggtctatcc
     2221 cggcttcctg cagcacgccg ggttcatcgc gatgaatccc agccgccacc tgcgctcgca
     2281 ctgggatttc taccaggacc tcctgcgcgg cgacctcgag gatgccgacg cgcaccgcaa
     2341 gttctacgac gaatacaacg ccgtgctcga catgccggcg aagtactacc tgggcaccat
     2401 ccgcaccgtg ttccagcaat tcctgctgcc acgcggcctg tgggacgttg ccggcgaacg
     2461 cgtggccccc gccgccatca cgaagagcgc gctgctcacc atcgaaggcg agctcgacga
     2521 catctccggc cgcggccaga ccgaagccgc ccacgacctg tgccgcagca ttcccgcggg
     2581 acaccgagcc caccgcgtga tcgaaggcgc cggccactac ggcatcttca gcggccgccg
     2641 ctggcgcgac gtggtgtacc cgcaggtacg cgacttcatc cgcaagttcg atcacgcagc
     2701 aaggaagtag accgcgcgag ccgcacgctc gaagccctcc ccttcaaggg gagggtttgg
     2761 gtgggaatgg ggttggtgtt gattctttgg atggccgctg catcagagcg gtttcgtgcc
     2821 gctgacgcgg cccgagttcc tttctctttg aatggccaaa gagaaaggaa ccaaagagaa
     2881 acgccacccc gatggcgcgc cctccgggca tcctgccctg cgggtgcgcg ggtgggctgc
     2941 ggggttttcc ggcggcacct ccgtgtgccg tcggaaaact ggcccgcatc catgcgggcc
     3001 atcct
//
LOCUS       DASSVL010000286         3983 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_797522, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000286 DASSVL010000000
VERSION     DASSVL010000286.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3983)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3983)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3983
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_797522"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..254)
                     /locus_tag="VFM52_04920"
     CDS             complement(<1..254)
                     /locus_tag="VFM52_04920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007810225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II/IV secretion system protein"
                     /protein_id="HET8764541.1"
                     /translation="MAASPEITSLLGRRGRLQLDELLAALVVDGLVAAEDAKQVRLGS
                     RAGRSAVELHPLVVIANARLANQRDTGRPLSLENLVEWLAG"
     gene            352..1263
                     /gene="glyQ"
                     /locus_tag="VFM52_04925"
     CDS             352..1263
                     /gene="glyQ"
                     /locus_tag="VFM52_04925"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017460708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009345 - glycine-tRNA ligase complex
                     [Evidence IEA];
                     GO_function: GO:0004820 - glycine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006426 - glycyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit alpha"
                     /protein_id="HET8764542.1"
                     /translation="MSAPTFQDVIQTLNRYWAAQGCVLLQPLDTEVGAGTFHPATFLR
                     SLGPEPWAAAYVQPSRRPTDGRYGDNPNRLQHYYQYQVVMKPNPENILDLYIGSLKEL
                     GIDPLVHDLRFVEDNWESPTLGAWGLGWEVWLNGMEVTQFTYFQQAGGLECRPVTGEV
                     TYGLERLAMYLQNVDNVYDLVWTHAPHGTVTYGDVFHQNEVEQSTYNFEYANVPELLR
                     WFDVCEATANQLIAANLPLPAYEQVMKASHTFNLLDARRAISVTERQRYILRVRTLAR
                     SVAEAYVAQRERLGFPGLKKNVKELAA"
     gene            1260..3413
                     /gene="glyS"
                     /locus_tag="VFM52_04930"
     CDS             1260..3413
                     /gene="glyS"
                     /locus_tag="VFM52_04930"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018972277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009345 - glycine-tRNA ligase complex
                     [Evidence IEA];
                     GO_function: GO:0004820 - glycine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006426 - glycyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit beta"
                     /protein_id="HET8764543.1"
                     /translation="MSAPKSLLVELGTEELPPKALDELSAAFAHGVCEGLTKRGIDAA
                     VGDARAYASPRRLAVHIPRVADTQPEQVIERRGPALAAALDAEGKPTKALLGFAHSCG
                     VDVDSLQQLDTGKGAWFVFHAVQPGQPLAALLPEIVDEALKALPIPRPMRWADHEHAF
                     VRPAHWLVMLHGADVIDGEVLGIRSGRQSRGHRFMHPQPVHVADADGWLAAMRGAKVL
                     ADADERRQRVRDEVARAARETGGVPRLSDELLHEVANLAEWPVAIACSFERSYLEVPP
                     EALVTTMETNQKFVPVFTADGKLSEHFIGIANIESKNPAEVRKGYERVIRPRFADAKF
                     FWDEDLKTPLASYQDQLKQVTYQKALGSLWDKSCRVAEMARIIAGRVDVDGGLATRAA
                     ALSKCDLLTRLVGEFPDVQGVMGRYYAAHDGEPAAVAAALDSGYQPRFARDAIAADKV
                     GQVLAVAERVDTLAGIFAAGRKPSGNKDPFALRRAALGLARTLIEGELELDLRAVFIE
                     ALELLADEVFAAGVKPGKDGKKPPVDAGKRRAELAVELHAFVLDRLRGYYADQGFAAD
                     VFEAVAAVDPEHLLDFDHRLHAVAAFSHLPAAASLAAANKRVANILRKQTEEDGQPLM
                     VGKVDPAHFEHAAEKELAMALDAAKADSAAALGRGDYAFVLNRLAALQPPVDAFFEQV
                     LVNAEDPAVRRNRLALLGQLKAAFGAVADIALLRG"
     gene            complement(3486..>3983)
                     /locus_tag="VFM52_04935"
     CDS             complement(3486..>3983)
                     /locus_tag="VFM52_04935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019463907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HET8764544.1"
                     /translation="GSATEIARMCGFSEGVVRSWRDGNTDPSRARCVTLARTLGISLV
                     WLVAGEGALQVDPTLSGSDDSQFTSETTRPRWHAGPMHATTATAPADAGVDPHRLNTA
                     MQILQSELKLAGSALTLADNTDLLSELYEVLGANGESVNAMAMLKFNHALTARILQAK
                     QRTLA"
BASE COUNT          632 a         1335 c         1407 g          609 t
ORIGIN      
        1 ccggcgagcc attcgacgag gttctcgagg ctgagcgggc gcccggtgtc gcgctggttg
       61 gccagcctgg cattggcgat gacgacgagc gggtggagtt cgacggcgct gcgcccggcg
      121 cgcgaaccca ggcgcacctg ctttgcgtcc tccgcggcga ccaggccatc gaccaccagt
      181 gcggcgagca gctcgtccag ttgcagtcgt ccgcggcggc cgagcaggct ggtgatttcg
      241 ggggatgcag ccatccgcag gactctcctc gcgcgtgcgc cgcgcgcgca aaccggcgcc
      301 gggacgcacg ctcgctatac taacgcgctt tgttcacggt cacggaaagc catgtccgca
      361 cccaccttcc aggatgtgat ccagaccctc aatcgttatt gggcggcgca gggttgcgtg
      421 ttgctgcagc cgctcgatac cgaggtcggc gccggcacct tccacccggc caccttcctg
      481 cgctcgctcg gcccggaacc ctgggcagcc gcctacgtgc agccgtcgcg gcgccccacc
      541 gacggccgct acggcgacaa cccgaaccgc ctgcagcatt actaccagta ccaggtggtg
      601 atgaaaccga acccggagaa catcctcgat ctctacatcg gctcgctgaa ggagctgggc
      661 atcgacccgc tcgtgcacga cctgcgcttc gtcgaggaca actgggagtc gcccacgctg
      721 ggcgcgtggg ggctgggctg ggaggtgtgg ctgaacggca tggaagtcac ccagttcacc
      781 tatttccagc aggccggcgg cctcgagtgc cggccggtga ccggcgaggt cacctacggc
      841 ctggaacgtc tcgcgatgta cctgcagaac gtggacaacg tatacgacct ggtgtggacg
      901 catgcgccgc acggcaccgt cacctacggc gacgtgttcc accagaacga ggtcgagcag
      961 agcacctaca acttcgagta cgccaacgtg ccggagctgc tgcgctggtt cgacgtgtgc
     1021 gaggccaccg ccaaccagct gatcgcggcg aacctgccgc tgcccgccta cgagcaggtg
     1081 atgaaggcga gccatacctt caacctgctc gacgcgcggc gcgcgatcag cgtcaccgag
     1141 cgccagcgct acatcctgcg cgtgcgcacg ctggcgcgca gcgtggccga ggcgtacgtc
     1201 gcgcagcgcg agcggctggg ttttccgggg ctcaagaaga acgtgaagga gctggccgca
     1261 tgagcgcgcc gaagtcgttg ctggtcgaac tgggcaccga ggagctgccg ccgaaggcgc
     1321 tcgacgaact gtccgctgcg tttgcgcacg gcgtgtgcga aggcctgacg aagcgcggca
     1381 tcgacgccgc cgtgggcgac gcgcgcgcct acgcctcgcc acggcgtttg gccgtccata
     1441 ttccgcgcgt cgccgacacc cagccggagc aggtcatcga acgtcgcggc ccggcgcttg
     1501 ccgcggcact cgatgccgaa ggcaagccga ccaaggcgtt gctggggttc gcgcactcct
     1561 gcggcgtcga cgtggacagt ctgcagcagc tcgacaccgg caagggcgcg tggttcgtgt
     1621 tccatgcagt gcagccgggg cagccgctgg cggcgttgct gccggaaatc gtcgacgagg
     1681 cgctcaaggc gctgccgatc ccgcggccga tgcgctgggc ggatcacgag cacgcgttcg
     1741 tgcgcccggc gcactggctg gtgatgctgc acggcgccga tgtcatcgac ggcgaggtgc
     1801 tcggcatccg cagcgggcgg cagtcgcgcg gacaccgctt catgcatccg cagccggtgc
     1861 acgtggccga tgccgacggc tggctggcgg cgatgcgcgg cgcgaaggtg ctggccgatg
     1921 cggacgaacg ccggcagcgc gtgcgcgacg aggtggcacg cgccgcacgc gagaccggcg
     1981 gcgtgccgcg cctgagcgac gagttgctgc acgaggtggc gaacctcgcc gaatggccgg
     2041 ttgcgatcgc gtgcagcttc gagcgcagct acctcgaagt gccgcccgag gcgctggtca
     2101 ccacgatgga gaccaaccag aaattcgtgc cggtgttcac cgccgacggc aagctcagcg
     2161 aacacttcat cggcatcgcc aacatcgagt cgaagaaccc ggccgaagtg cgcaagggct
     2221 acgagcgggt gatccgtccg cgtttcgccg atgcgaagtt cttctgggac gaagacctca
     2281 agacgccgct ggcgagctac caggatcagc tcaagcaggt gacctaccag aaggcgctcg
     2341 gcagcctgtg ggacaagagc tgccgcgttg ccgagatggc gcgcatcatc gccggccgcg
     2401 tcgacgtcga cggcgggttg gcgacgcgcg cggcggcgct ttcgaaatgc gacctgctga
     2461 cccgcctggt cggcgaattc cccgacgtgc agggcgtcat gggccgctac tacgcggcgc
     2521 acgatggcga gcccgccgcc gtcgcggcgg cgctcgacag tggttaccag ccgcggtttg
     2581 cacgcgacgc gatcgcggcc gacaaggtcg gccaggtgct ggctgtggcg gagcgcgtcg
     2641 acaccctggc cggcatcttc gctgccggcc ggaagccgag cggcaacaag gaccccttcg
     2701 cgctgcgccg tgcggcgctc ggcctggcgc gcacgctgat cgaaggcgag ctggaactcg
     2761 acttgcgcgc ggtgttcatc gaggcgctgg agctgctggc cgacgaggtc tttgccgccg
     2821 gcgtgaaacc gggcaaggac ggcaagaagc cgccggtcga tgccggcaag cggcgtgccg
     2881 agctggcggt ggaactgcac gcgttcgtgc tcgatcgcct gcgcggctac tacgccgatc
     2941 aaggctttgc ggcggatgtg ttcgaggcgg tggcagccgt cgaccccgag cacctgctcg
     3001 atttcgacca tcgcctgcac gcggtcgcgg cgttcagcca cctgccggcg gcggccagcc
     3061 tggccgccgc gaacaagcgg gtcgcgaaca tcctgcgcaa gcagaccgag gaagatggcc
     3121 agccgttgat ggtcggcaag gtcgaccccg cgcacttcga gcatgctgcc gagaaggaat
     3181 tggcgatggc gctcgacgcc gcgaaggcgg acagtgcggc agcgctgggc cgtggcgact
     3241 acgcgttcgt gctgaaccgg ctcgccgcgc tgcagccacc ggtggatgcg tttttcgaac
     3301 aggtgctggt gaacgccgag gatccggcgg tgcgtcgcaa tcgccttgcc ttgctcggcc
     3361 agctcaaggc cgctttcggc gccgtcgccg acatcgcctt gctgcgcggc tgacaccaag
     3421 caaaacggca acccgaaggt tgccgctttg cgctcccgcg caccgaccgc gggttgctgc
     3481 ggtgatcagg ccagggtgcg ctgcttggcc tgcaggatac gcgcggtcag cgcgtggttg
     3541 aacttgagca tcgccatcgc gttgacgctt tcgccgttgg cgccgagcac ttcgtacagc
     3601 tcgctcagca ggtcggtgtt gtccgccaac gtcagggcac tgccggccag cttcagctcc
     3661 gactgcagga tctgcatcgc ggtgttcagg cgatgcggat cgacgccagc gtcggcgggg
     3721 gccgttgccg tcgtcgcatg catggggccg gcatgccagc ggggacgcgt ggtttccgac
     3781 gtgaactggc tgtcgtcgct gccggacagg gtgggatcga cctgcagcgc gccttcgccg
     3841 gcgaccagcc agaccagcga gatgcccagc gtgcgcgcga gggtgacgca acgcgcacgg
     3901 gaggggtcgg tgttgccatc gcgccagctg cgcaccacac cttccgagaa cccgcacatg
     3961 cgggcgattt cggtggcgct gcc
//
LOCUS       DASSVL010000287         2474 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_769431, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000287 DASSVL010000000
VERSION     DASSVL010000287.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2474)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2474)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2474
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_769431"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..778)
                     /locus_tag="VFM52_04940"
     CDS             complement(<1..778)
                     /locus_tag="VFM52_04940"
                     /EC_number="2.8.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF024860.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008146 - sulfotransferase activity
                     [Evidence IEA];
                     GO_function: GO:0050656 - 3'-phosphoadenosine
                     5'-phosphosulfate binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfotransferase"
                     /protein_id="HET8764545.1"
                     /translation="MQRVFVVGCPRSGTTLVQALLARHPAVLALAGTGFFPHLYGDER
                     QRWGDRDVRPPRRRLRVGLGFARRQARMALQVMQGRLASDRELPAWPLRTTACVRCFI
                     DLLDTRAGDDRRDAWVETTPCHLLYIPEIASAMPDARFVHVIRRGEDVLASIADANLR
                     FDGNRAFGGGAVLWARRWNRALQIHRQHAHEVRHHFVFLDDLLTDQAGEWRALCDFVG
                     IDAAATLDDTCGQTVADLLREPWKRGVVSGRPRAVTVKDER"
     gene            974..1909
                     /locus_tag="VFM52_04945"
     CDS             974..1909
                     /locus_tag="VFM52_04945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007508297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HET8764546.1"
                     /translation="MTNPAGIHVIDTGFVRPRFDAAYLVVENGHAAFIDCGTNHAVPR
                     MLAALDANGLTPEQVDWLILTHVHLDHAGGAGALMAKLPNAQLVVHPRGARHMIDPSK
                     LWASASAVYGEDVMEKTYGRLLPIPAARVVEAHDNHVVDLAGRELVCLETPGHARHHN
                     AIHDLRSNVCFTGDVFGLSYRDFDTAKGAFILPTTSPVQFDPEALHASIRRLVALRPA
                     GLYLTHFGRIDDVSRLADDLHAQIDAMVAIAQAHRTDPDRHAAIKHALTDLYAGRAAG
                     HGWNWGRDALTALLSMDIELNAQGLGVWLDQAARH"
     gene            complement(2081..>2474)
                     /locus_tag="VFM52_04950"
     CDS             complement(2081..>2474)
                     /locus_tag="VFM52_04950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019465336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ketopantoate reductase C-terminal
                     domain-containing protein"
                     /protein_id="HET8764547.1"
                     /translation="DMWDKWVFLASLAGITCLMRAPVGDIVAAPGGRAATLALLDDCR
                     RVAAACGYEPADKVIDRAASMLTEAGSAFSASMMRDLENGGRIEADHVIGDLLARGAM
                     HGVDTPLLQLAYAHLKAYESRRARAGNA"
BASE COUNT          380 a          917 c          826 g          351 t
ORIGIN      
        1 cgcgctcgtc cttgaccgtt accgcgcgcg ggcgcccgct gaccacgccg cgtttccacg
       61 gctcgcgcag caggtcggcc actgtctggc cgcaggtgtc gtccagcgtc gccgcggcat
      121 cgatcccgac gaaatcgcac agcgcccgcc actcgccggc ctggtcggtg agcaggtcat
      181 cgagaaacac gaagtggtgg cgcacctcat gggcgtgctg gcggtggatc tgcaatgcgc
      241 ggttccagcg ccgcgcccac agcacggcgc cgccgccaaa cgcgcggttg ccgtcgaagc
      301 gcaggttggc gtcggcgatc gaggccagca cgtcctcgcc gcggcggatg acgtgcacga
      361 accgcgcatc cggcatcgcg ctggcgatct ccgggatgta cagcaggtgg cacggggtcg
      421 tttccaccca cgcgtcgcgt cggtcgtcgc cggcgcgggt gtcgagcagg tcgatgaagc
      481 accgcacgca tgcggtggtg cgcagcggcc acgccggcag ctcgcggtcg ctggccagcc
      541 ggccctgcat gacctgcagc gccatgcgcg cctggcggcg ggcaaaaccg agcccgacgc
      601 gcaaccgccg ccgcggtggt cgcacgtcgc gatcgcccca gcgctgccgc tcgtcgccgt
      661 acagatgcgg gaagaacccg gtcccggcca gcgccagcac cgccgggtga cgcgccagca
      721 gcgcctggac cagcgtggtg cctgagcgcg ggcagccgac cacgaacacg cgttgcacca
      781 gcgccccccc cttccaccgt cgattcatta cagaccatga cagcaaacgg tcagccaaca
      841 gtcaggttga cgcgtggcag ccgttttccc gtgccttcgc caccgcacgg cccccagtgc
      901 cgccccacgt cgacggcttg gcttccatgg cgtgcgcgcc tacgctcgaa gcctcgcctc
      961 atcgagattc accatgacca acccggcagg catccacgtc atcgataccg gcttcgtgcg
     1021 cccgcgcttc gacgccgcgt atctcgtcgt cgaaaacggc cacgctgcct tcatcgattg
     1081 cggaaccaac cacgcggtgc cacgcatgct cgcggcactc gacgcgaacg ggctcacgcc
     1141 ggagcaggtg gactggctga tcctcaccca cgtgcacctc gaccacgccg gcggcgccgg
     1201 cgcgctgatg gcgaagctgc cgaacgcgca gctcgtcgtg cacccgcgcg gcgcgcggca
     1261 catgatcgac ccgtcgaaac tgtgggccag cgccagcgcc gtgtatggcg aggacgtgat
     1321 ggaaaagacc tacggccgcc tgctgccgat ccccgccgca cgcgtggtcg aggcgcacga
     1381 caaccacgtc gtggacctcg cgggccgcga gctggtgtgc ctggaaacac ccgggcacgc
     1441 caggcaccac aacgcgatcc acgacctgcg cagcaatgtg tgcttcaccg gtgacgtgtt
     1501 cggcctgtcc taccgcgatt tcgacacggc gaaaggcgcc ttcatcctgc ccacgacctc
     1561 gccggtgcaa ttcgatccgg aggcgttgca cgcctccatc cgccgcctgg tggcgctcag
     1621 gccggccggc ttgtacctca cccacttcgg ccgcatcgac gatgtgtcgc gcctcgccga
     1681 cgacctgcac gcgcagatcg acgcgatggt cgccatcgcc caggcgcacc gcacggatcc
     1741 cgatcgccat gccgcgatca agcacgcgct caccgacctc tacgccggcc gcgctgccgg
     1801 gcacggctgg aactggggcc gcgacgcgct gaccgcgctg ctgtcgatgg acatcgagct
     1861 caacgcgcag gggctcggcg tgtggctcga tcaagcggcc aggcattgac gcgcagcggg
     1921 tctcggtccg gatgcatccc gacccacagg agcggctgca tgatgggcga tcttccaccg
     1981 cgcggcgctg actgaacgcc atcccctcca agcgtcgcct ggaagggcag gccaccagca
     2041 ccgggatcgg gtgccgccgg acggtgcttc cgcttggcgg ctacgcgttg ccagcgcggg
     2101 cacgccgcga ttcgtaggcc ttgaggtggg cgtacgccag ttgcagcagc ggcgtgtcga
     2161 cgccgtgcat ggcgccgcgg gcgagcaggt cgccgatcac gtggtcggcc tcgatccggc
     2221 cgccgttttc gaggtcgcgc atcatcgacg cgctgaaggc cgagccggct tcggtcagca
     2281 tcgatgccgc gcggtcgatc accttgtcgg ccggctcgta gccgcaggca gccgccacgc
     2341 ggcggcagtc gtcgagcagc gcgagcgttg cggcgcggcc gccgggcgcg gcgacgatgt
     2401 cgccgaccgg cgcgcgcatc aggcaggtaa tgccggcgag gctggcgagg aacacccatt
     2461 tgtcccacat gtcc
//
LOCUS       DASSVL010000288         6781 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_882589, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000288 DASSVL010000000
VERSION     DASSVL010000288.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 6781)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6781)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6781
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_882589"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..543)
                     /locus_tag="VFM52_04955"
     CDS             complement(<1..543)
                     /locus_tag="VFM52_04955"
                     /EC_number="2.1.1.45"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011260172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004799 - thymidylate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006231 - dTMP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thymidylate synthase"
                     /protein_id="HET8764548.1"
                     /translation="MHAYLDLLRHVLEHGTPKSDRTGTGTRSVFGWQMRFDLRAGFPL
                     VTTKKLHLRSIIHELIWFLHGDTNVAYLKEHGVRIWDEWADEHGDLGPIYGKQWRAWS
                     TPDGGHIDQIRVVVDEIRRNPDSRRLIVSAWNVADLPRMALQPCHTLFQFYVVDGRLS
                     CQLYQRSGDIFLGVPFNIASY"
     gene            complement(565..1038)
                     /gene="rimI"
                     /locus_tag="VFM52_04960"
     CDS             complement(565..1038)
                     /gene="rimI"
                     /locus_tag="VFM52_04960"
                     /EC_number="2.3.1.266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007507090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008999 -
                     peptide-alanine-alpha-N-acetyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosomal protein S18-alanine
                     N-acetyltransferase"
                     /protein_id="HET8764549.1"
                     /translation="MVAVARPACRVRLMHADDLDDVFAIEQASYEFPWTRGIFADCLH
                     AGHPCWVLCVDEAVAGYGILSVGAGEAHVLNICIASGYRGTGLGRHLLGRLLDVARWS
                     GAQRVFLEVRPSNPNAKALYDSVGFREIGRRPHYYPARNGREEAIVMALDVGQPR"
     gene            complement(1042..1503)
                     /locus_tag="VFM52_04965"
     CDS             complement(1042..1503)
                     /locus_tag="VFM52_04965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015446983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8764550.1"
                     /translation="MTPAAGHRSEVLRALGITSWRLRQPAAGTPAPPGDVAGDTTRCV
                     VLLPAVVGTRELDLLGRALTAAGAALARAARIRVPADADAEVAVPQAAAYLACGEAQA
                     HAIGRSLPAQATAAAQIVLVDPPDRLLRDAGAKRRLWIALRTLRRALAAGS"
     gene            complement(1500..2285)
                     /locus_tag="VFM52_04970"
     CDS             complement(1500..2285)
                     /locus_tag="VFM52_04970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015446982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylcholine/phosphatidylserine synthase"
                     /protein_id="HET8764551.1"
                     /translation="MSESAPTPPPRHRGIYLLPNLFTTGAMFAGFYAILAGIGGRFEE
                     AAVAVFVAGLLDGMDGRVARLTGTQSEFGVQYDSLSDLVSFGLAPALVMYTWSLSTLH
                     EFGPLWGKLGWAAAFIYAACAALRLARFNTQVGVVDKRYFQGLASPAAAAVCMAFVWS
                     MERFEVSGAELCFITPWIAVVTGLLMVSRFRYFSFKSLPLGAGQRVPFVWIVAALLLL
                     VLLYLDPPRVLLAGFTVYLLSGPVLTVWGRAAHRRRVRRGGAT"
     gene            2427..2852
                     /locus_tag="VFM52_04975"
     CDS             2427..2852
                     /locus_tag="VFM52_04975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015446981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4124 domain-containing protein"
                     /protein_id="HET8764552.1"
                     /translation="MRRSLIVVALLAVAPVAGAQQIYKWTDAHGTVHYSQSAPAQGLK
                     YQQVKLASGVETPATPAPQPATAETEAKPAPTAAQMADTPENRTKLCTTLKSNLATLQ
                     GTGPVVMQQGAKPTVLDDAQRQQQIAQANAQYQQFCTAK"
     gene            2933..4630
                     /locus_tag="VFM52_04980"
     CDS             2933..4630
                     /locus_tag="VFM52_04980"
                     /EC_number="6.1.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019399555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0002161 - aminoacyl-tRNA editing activity
                     [Evidence IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0004827 - proline-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA];
                     GO_process: GO:0006433 - prolyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="proline--tRNA ligase"
                     /protein_id="HET8764553.1"
                     /translation="MRLSQFHLATVKEVPADAEIASHQLMLRTGMIRKLAAGLYTWGP
                     LGLRVLRKVEAVVREEMNRAGAIEILMPTIQPRELWEETGRWQKFGGQLLKIRDRKEQ
                     EFCYAPTAEEVITDYARNELSSYKQLPVNFYQIQTKFRDEIRPRFGVMRAREFVMKDA
                     YSFHLDQDSLAATYRVMYDAYTRIFTRLGLKFRAVQADTGAIGGNASHEFQVLADSGE
                     DAIAFSDGSDYAANVEKAEAVAPATPRPAPAAALQRVDTPAQKTIDDVSAFLGVAPAQ
                     CVKTLLVRGKDGLVALCLRGDHELNEVKAAKLVELPGEFAMADEAGIVAALSAHPGSL
                     GPVGLPESVPVIVDRSAAALADFVCGGNQDGTHFTGANWERDARVTRVEDIRQVVAGD
                     PSPDGHGTLHLARGIEVGHVFQLGRKYAEAMGATVLDAQGKAQVMSMGCYGIGITRIV
                     AAAIEQCHDDAGIVWPQAMAPWRVVICVINPKHKPEIDAAADALYHELDGRGIEVALD
                     DRGLRPGAMFADMELIGIPHRVVISERGLAAGTFEYRARTQVESEALDHAALLSRLA"
     gene            4853..5173
                     /locus_tag="VFM52_04985"
     CDS             4853..5173
                     /locus_tag="VFM52_04985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007810053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="H-NS histone family protein"
                     /protein_id="HET8764554.1"
                     /translation="MAIDLKGLNQNQLNDLINKAQSRQEELRKEKVVKLRDKVHQLIK
                     AEGLTFDDVFGAGRGKRRSGGVVPPKFRNPANAEQTWSGRGKRPRWFNEALKAGKKEK
                     DMLI"
     gene            complement(5235..6515)
                     /locus_tag="VFM52_04990"
     CDS             complement(5235..6515)
                     /locus_tag="VFM52_04990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007082989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/serine exporter family protein"
                     /protein_id="HET8764555.1"
                     /translation="MSAITTAGVPAAATAVLGTRIAFLLELARRLQQYGTTAPRLEMA
                     ITLSAKRLGVQAEVWSSPTALIISFSDLAKGGDGLAQTTQVMRLSQGDINLARLCAAD
                     EIADRVIDGRLDLRDGFRLLRALGAPDTFKARVSTVASYGLSAASIAALFLHSSWVDL
                     VVAGAIGVLIGVITLAAATRPRLAAASDAISAIVATTVAIVVSAFFVPLAIKSVVLAA
                     LIILVPGFSLTTAVREVSSGHLVSGMARLGGATATMLKLAFGAVAASSVCAALGIHAR
                     DFALKPLPAWTDWPSLIVAAVAFAMLFRAAWRDWPAVVVAVIGGYLATRWGGDYSGPL
                     PSAPFGVFLGGLMVSALANLYARIAKRPGAVVREPGILLLVPGSVGFRSVSFLLERDT
                     VVGMDTAMLLLTLLVSLVGGLLFGELLVSPRRSL"
     gene            complement(6512..>6781)
                     /locus_tag="VFM52_04995"
     CDS             complement(6512..>6781)
                     /locus_tag="VFM52_04995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007507104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NfeD family protein"
                     /protein_id="HET8764556.1"
                     /translation="LLAVASCVAYARWLRPRIERRAPGDERLNRRGEQMIGQRYELIE
                     AIVNGRGKVRVGDGQWLVSGPDMPTGATVEVVAVDGTTLKVRAAG"
BASE COUNT         1250 a         2369 c         2218 g          944 t
ORIGIN      
        1 gtagctggcg atgttgaacg gcacgccgag aaagatgtcc cccgaacgct ggtagagctg
       61 gcagctcagg cggccgtcga cgacgtagaa ctggaacagc gtgtggcacg gctgcagcgc
      121 catcctcggc aggtccgcga cattccatgc actgacgatc agccggcgcg aatcggggtt
      181 cctgcggatc tcgtccacca ccacgcgaat ctggtcgatg tgcccgccgt ccggcgtcga
      241 ccacgcgcgc cactgcttgc cgtagatcgg gccgaggtcg ccgtgttcat cggcccattc
      301 gtcccagatg cgtacgccat gttccttcag gtaggcgacg ttggtgtcgc catgcaggaa
      361 ccagatcagc tcgtggatga tcgacctgag gtgcagcttc ttggtggtga ccagcgggaa
      421 cccggcgcgc aggtcgaagc gcatctgcca gccgaacacg ctgcgcgtgc cggtaccggt
      481 gcggtcggat ttcggggtgc cgtgttcgag cacatggcga agcaggtcga ggtaggcgtg
      541 catcgcgcaa ggataccgcg gcgctcagcg cggctggccg acgtcgagcg ccatcacgat
      601 ggcctcttcg cgcccgttgc gcgccgggta gtagtgcggg cggcggccaa tctcgcgaaa
      661 gccgaccgag tcgtacaacg cctttgcatt cgggttggaa ggccgcactt cgagaaagac
      721 gcgctgggcg ccgctccagc gcgccacgtc cagcaggcgg cccagcaggt gccggccaag
      781 ccccgtaccg cggtacccgg acgcgatgca gatgttgagc acgtgggcct cgccggcccc
      841 caccgagagg atgccgtagc cggccacggc ctcatcgacg cacagcaccc agcatgggtg
      901 gccggcatgc aggcagtcgg caaagatgcc gcgcgtccat ggaaattcgt acgacgcctg
      961 ctcgatcgcg aacacgtcat cgagatcgtc cgcatgcatc aggcgtacgc ggcaggccgg
     1021 ccgggcaacg gcaaccacgg ttcagctccc cgcggccagg gcgcggcgca aggtgcgcag
     1081 cgcgatccac aggcgacgct tggcgccggc atcgcgcaac aggcggtcgg gcgggtcgac
     1141 cagcacgatc tgcgccgcgg ccgtggcctg cgccggcagg ctgcggccga tggcatgcgc
     1201 ctgcgcctcg ccacaagcca ggtaggccgc cgcctgtggc acggcaacct cggcatccgc
     1261 gtccgcgggc acccggatgc gggccgcacg cgccaatgcc gcgccggccg ccgtcaacgc
     1321 acggcccagc agatcgagct cgcgggtgcc gacgaccgcc ggcagcagca ccacgcagcg
     1381 cgtggtgtcg ccggccacgt cacccggcgg cgccggtgtg cctgccgccg gctggcgcag
     1441 ccgccacgac gtgatgccga gcgcgcgcag cacttcactg cgatggccgg cagccggcgt
     1501 cacgtcgcgc ctccccgccg cacgcgccgg cggtgcgcgg cgcgccccca taccgtcagc
     1561 accggcccgg acaggaggta cacggtgaag ccggccagca ggacgcgtgg cgggtcgagg
     1621 tacagcagca ccagcagcag cagcgccgcc acgatccaca cgaacggcac gcgctgtccc
     1681 gcgccgagcg gcagcgactt gaagctgaaa tagcggaaac ggctgaccat caacagcccg
     1741 gtgacgacgg cgatccacgg cgtgatgaag cacagttccg caccactcac ctcgaagcgc
     1801 tccatgctcc acacgaaggc catgcacacc gcggcggcgg ccgggctggc caacccctgg
     1861 aagtagcgct tgtcgaccac gccgacctgg gtgttgaagc gcgccagccg caacgcggcg
     1921 cacgccgcgt agatgaatgc cgccgcccag ccgagcttgc cccacagcgg accgaattcg
     1981 tgcagcgtcg acagcgacca cgtgtacatc accagcgccg gggcgagacc gaagctcacc
     2041 aggtcggaca gcgaatcgta ttgcacgccg aactcgctct gggtgccggt caggcgcgcc
     2101 acgcgtccgt ccatgccatc cagcaacccg gcgacgaata ccgccaccgc cgcctcctcg
     2161 aaccgcccgc cgatgcccgc gaggatcgcg tagaagccgg cgaacatcgc cccggtggtg
     2221 aacaggttgg gcagcagata gatgccgcga tgccgcggcg gcggggtcgg cgcagattcg
     2281 ctcatgtacc gttccgtgac gaaatgcacg cagtttaggg cctgcccgcg ggaaccgcat
     2341 gtctccgctt gagtcttgcc gacgccagcg cttaactagg cgcgttccgg gctgcccggt
     2401 cgttccgcct tcgtctggag agtcgcatgc gccgctcgct gatcgtcgtg gccctgctgg
     2461 ccgtcgcccc cgtggcgggc gcgcagcaaa tctacaaatg gacggatgcc catggcacgg
     2521 tgcattactc gcaatcggca ccggcacaag gcttgaaata ccagcaggtg aaactggcca
     2581 gcggtgtcga gacacccgca acgccggccc cgcaaccggc cactgccgaa accgaggcca
     2641 agccggcacc gaccgccgcg caaatggccg acacgccgga aaaccgcacc aagctgtgca
     2701 cgacgctcaa gtccaacctg gccaccctgc agggcaccgg gccggtggtg atgcagcaag
     2761 gcgccaagcc gacggtgctc gacgatgcgc aacgccaaca gcaaatcgcg caggcgaacg
     2821 cgcaatacca gcagttctgc accgcaaagt agccgccaag gcgcgccgcc gcggcgttgc
     2881 gcgacgcagc acgccgctat aatccgggtt tcctccgccc ggaagccgtc gcatgcgcct
     2941 cagtcaattc catctcgcga ccgtcaagga agtgcctgcc gacgccgaga tcgccagcca
     3001 ccaattgatg ctgcgcaccg gcatgatccg caagctcgcg gccgggcttt acacctgggg
     3061 gccgctcggc ttgcgcgtac tgcgcaaggt cgaggccgtg gtgcgcgagg aaatgaaccg
     3121 cgccggcgcg atcgagatcc tgatgccgac gatccagcca cgcgagctgt gggaggaaac
     3181 cgggcgctgg cagaaattcg gcggccaatt gctgaagatc agggaccgca aggagcagga
     3241 attctgttac gccccgaccg ccgaggaagt gattaccgac tacgcgcgca acgagctgtc
     3301 cagctacaag cagttgccgg tcaacttcta ccagatccag accaagttcc gcgatgaaat
     3361 ccgcccgcgc ttcggggtga tgcgcgcgcg cgaattcgtc atgaaggacg catattcctt
     3421 ccacctcgac caggactcgc tggccgcgac ttaccgcgtg atgtacgacg cctatacgcg
     3481 catcttcacc cgcctcgggt tgaagttccg cgcggtgcag gcggacaccg gcgcgatcgg
     3541 cggcaatgcc agccacgagt tccaggtgct ggccgattct ggcgaggacg ccattgcgtt
     3601 ctcggatggc tcggattacg ccgccaatgt tgaaaaggcc gaggcggtgg cgccagccac
     3661 cccgcgtccg gcgccagcgg ccgccttgca gcgcgtcgat acgccggcgc aaaaaaccat
     3721 cgacgacgta agcgcattcc tcggcgtcgc cccggcgcaa tgcgtcaaga ccctgctggt
     3781 gcgcggcaag gatggcctgg tcgccctgtg cctgcgcggc gaccacgaat tgaacgaggt
     3841 gaaagccgcg aagctggtcg aattgccagg cgaattcgcc atggcggacg aggccgggat
     3901 cgtcgccgcc ctcagcgcgc atcccggctc gctgggcccg gtcggcttgc cggagagcgt
     3961 gcccgtcatt gtcgatcgca gcgcagcggc attggccgat ttcgtctgcg gcggcaacca
     4021 ggacggcact catttcactg gcgccaattg ggaacgcgat gcgcgcgtga cccgggtaga
     4081 ggatattcgc caggtggtcg caggcgaccc gtcgcccgat ggccatggca cgctgcacct
     4141 ggcgcgcggc atcgaggttg gccacgtatt ccagctcggc cgcaaatacg ccgaggcaat
     4201 gggtgccacc gtgctcgatg cccagggcaa ggcgcaagtc atgtcgatgg gttgctacgg
     4261 catcggcatc acccgcatcg tggccgccgc catcgagcaa tgccacgacg atgccggcat
     4321 tgtctggccg caagccatgg cgccgtggcg cgtcgtcatt tgcgtcatca atcccaagca
     4381 caagccggaa atcgatgccg ccgccgacgc gctgtaccac gaactggacg gacgcggcat
     4441 cgaagtggcg ctcgacgacc gcggcttgcg cccgggcgcg atgtttgccg acatggaact
     4501 catcggcatt ccgcaccgcg tggtcatcag cgaacgcggg ctggcggccg gcacgttcga
     4561 atatcgcgcc cgcacgcaag tcgaaagcga agcgctggat cacgcggcat tgctttcccg
     4621 gctggcctga aacacgcctt tcgctgcaat ggaaacggtc gccgctggcg gccgtttcca
     4681 ttgcagcgca aatccccgcc accggcattg cggtcgcttc gtttgccaac cggcattatg
     4741 aaaaggcttt gcatgtcaag tcggtttggg caagaatgcg agcgcaccgg aatggtcacg
     4801 cgccgtgcgt ctgtccgggc tactgccaat caacacgatc accggagttc ccatggccat
     4861 cgatctcaag ggtctcaatc aaaaccaact caacgacctg atcaacaagg cgcagtcacg
     4921 ccaggaagaa ttgcgcaagg aaaaggtcgt caagctgcgt gacaaggttc accagctcat
     4981 caaggccgaa ggcctgactt tcgacgacgt gttcggcgcc ggccgcggca agcgccgcag
     5041 cggcggcgtg gtaccgccga agttccgcaa cccggccaat gccgagcaga cctggtccgg
     5101 ccgcggcaag cgcccgcgct ggttcaacga agcgctcaag gccggcaaga aagaaaagga
     5161 catgctgatc tgattcagct gtccgccacg tcgacaaaaa cgccggcctt gcgccggcgt
     5221 ttttgtcgac agcactacag tgaacgccgc ggcgagacca gcaattcacc gaacagcagg
     5281 ccgccaacca gcgacaccag cagggtcagc agcagcatcg cggtatccat gcccaccacg
     5341 gtgtcacgtt cgagcaggaa ggaaacgctg cgaaagccga cgctgcccgg caccagcagc
     5401 aggatgccgg gttcgcgcac cacggcgccc ggacgcttgg caatgcgcgc gtacagattg
     5461 gccagcgcgc tgaccatcag ccccccgagg aatacgccga acggcgcgct cggcagcggg
     5521 ccggaataat cgccgcccca gcgcgtggcg agatagccgc cgatcaccgc caccaccacc
     5581 gccggccagt cgcgccatgc ggcgcggaac agcatcgcga acgccaccgc ggcaacgatc
     5641 agtgacggcc agtcggtcca cgccggcaac ggcttcagcg cgaaatcgcg ggcatggatg
     5701 ccgagcgccg cacacacgct gctcgcggcg acggcgccga acgccagctt cagcatcgtc
     5761 gcagtcgccc cacccaggcg cgccatgccg gataccaggt gcccgctgga tacctcgcgc
     5821 accgccgtcg tcagcgagaa ccccggcacc aggatgatga gcgcggccag caccaccgac
     5881 ttgatcgcca gcggcacgaa aaacgcgctg acgacgatgg caacggtggt ggcgacgatg
     5941 gcgctgatcg cgtcgctggc ggccgccagc cgcggtcgtg tcgccgccgc cagcgtgatg
     6001 acgccgatca gcacgccgat cgcgccggcc accaccagat ccacccacga gctgtgcagg
     6061 aacagcgccg cgatgctggc ggcggacaag ccgtaactgg cgacggtgct gaccctggcc
     6121 ttgaacgtgt ccggcgcgcc gagcgcacgc agcaggcgaa acccgtcgcg caggtcgagc
     6181 ctgccgtcga tcacgcggtc ggcgatctcg tcggcggcac acagccgcgc gagattgatg
     6241 tccccctgcg acaggcgcat gacctgcgtg gtctgcgcca ggccatcgcc acccttggcg
     6301 aggtcggaga acgagatgat gagcgcggtg ggactcgacc acacctcggc ctgcacgccc
     6361 agccgtttcg ccgacagcgt gatcgccatt tccagccgcg gcgcagtggt gccgtactgc
     6421 tgcaggcgcc gcgcgagttc gagcaggaac gcgatgcgcg tgcccagcac ggcggtcgcc
     6481 gcggccggca cgcccgccgt ggtgatcgca ctcatccggc agcgcgtacc ttgagcgtgg
     6541 tgccgtcgac cgcgaccact tcgacggtgg cgccggtggg catgtccggg ccgctgacca
     6601 gccactggcc gtcgccgacg cgcaccttgc cgcggccgtt gacgatcgcc tcgatcagct
     6661 catagcgctg gccgatcatc tgttcgccgc gccggttcag gcgctcgtcg cccggcgcgc
     6721 ggcgctcgat gcgcggccgc agccaacgtg cgtaggcgac gcaactggcg accgccagca
     6781 g
//
LOCUS       DASSVL010000289         2402 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_458509, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000289 DASSVL010000000
VERSION     DASSVL010000289.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2402)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2402)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2402
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_458509"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..183
                     /locus_tag="VFM52_05000"
     CDS             <1..183
                     /locus_tag="VFM52_05000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014503111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HET8764557.1"
                     /translation="ISVEQLNSTRYAAMQTGAPMFQAQFTIGIPANLHIAALRDDFLE
                     LCDGMNLDAIMDPVKF"
     gene            455..916
                     /locus_tag="VFM52_05005"
     CDS             455..916
                     /locus_tag="VFM52_05005"
                     /EC_number="1.11.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007082668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008379 - thioredoxin peroxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin"
                     /protein_id="HET8764558.1"
                     /translation="MLETGKKVPALAGTTTDGGMFKLADAKGHWLVLYFYPKDATPGC
                     TREAQDFRDLHAMFAKRNALVVGVSRDSQASHARFTAQQDLPFPLVADTDETWCTAFD
                     VIHEKLLYGKRHLGVVRSTFLIDPHGKLAAQWRGVKVPGHAQAVLDAIPTA"
     gene            953..2332
                     /locus_tag="VFM52_05010"
     CDS             953..2332
                     /locus_tag="VFM52_05010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010365742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PhoH family protein"
                     /protein_id="HET8764559.1"
                     /translation="MSDSKRIYVLDTNVLLHDPTSLFRFEEHDIFIPMTVLEELDEKK
                     KGASEVSRNGRQVSRFLNELIVRGNGHGISNGLELASPQGIKLKRGAAVGRLYFQQRT
                     SANHGKADNLILAAVIELRDQNPDRPVVLVSKDINLRIKAKIYGIDAEDYENDRALDD
                     FALLFTGSAALPEDFWDRHPEVQSWNERGHTYYKLDHREDEDWYPNECLYLPDDGGVE
                     LRVLKIDDEHATLVLLDDHSHANHHVWGIAARNREQNFALNVLMDPDVDFVTLLGTAG
                     TGKTLLALAAGLAQVMDQQRYREIIMTRATVSVGEDIGFLPGTEEEKMTPWMGALTDN
                     LEVLANPEDGGSWGRQATNDLLASRIKIRALNFMRGRTFLSRYLIIDEAQNLTPKQMK
                     TLITRAGPGTKIVCLGNVEQIDTPYLTETTSGLTYAVDRFKLWDHSAHVTLRRGERSR
                     LADFASDIL"
BASE COUNT          439 a          857 c          743 g          363 t
ORIGIN      
        1 atcagcgtgg agcagctcaa ctccacgcgc tacgccgcga tgcagaccgg cgcgccgatg
       61 ttccaagcgc aattcaccat cggcatcccg gccaacctgc acatcgccgc attgcgcgac
      121 gatttcctcg aactgtgcga cggcatgaac ctcgacgcga tcatggatcc ggtgaagttc
      181 tgagcccgcg ggtcgggacg cagcccgacc gccggctggc atagctggcg acgccttgtc
      241 gggctgcagt ccgacctgcc gggcttcggc ctcgccgcga cttcgtgggc gggaatccgt
      301 cccggcgcac ggcccgccaa tagccggact ggataccgct tcgcgctgtc tttgccgggg
      361 cgcccagctt gccggcttgg tgccacgccg acaagcctgt tgttgcgcgc acccgacgcg
      421 ctaggctctc tccacgcccc acgcaggaga agccatgctg gaaaccggaa agaaagtccc
      481 cgcgctggcc ggcaccacca ccgacggcgg catgttcaag cttgccgacg ccaagggcca
      541 ctggctggtg ctgtatttct accccaagga cgccacgccc ggctgcaccc gcgaggcgca
      601 ggatttccgc gatctgcacg cgatgtttgc caagcgcaac gcgctggtcg tcggcgtctc
      661 gcgcgactcg caggcctcgc atgccaggtt caccgcgcag caggacttgc ccttcccgct
      721 ggttgccgac actgacgaaa cctggtgcac ggcgttcgac gtgatccacg agaagctgct
      781 ctacggcaag cgccacctcg gcgtggtgcg cagcacgttc ctgatcgacc cgcacggcaa
      841 gctcgccgcg caatggcgcg gggtgaaggt gcccggccac gcgcaggccg tgctcgacgc
      901 catccccacc gcctgatccc caccgtcacg ccacgcgcga ggtttccacc gcatgtccga
      961 cagcaagcgc atctacgtcc tggacaccaa cgtgctgctg cacgatccga cgtcgctgtt
     1021 ccgcttcgag gagcacgaca tcttcatccc gatgacggtg ctggaagaac tcgacgagaa
     1081 aaagaaaggc gcttccgagg tatcccgcaa cgggcgccag gtcagccggt tcctgaacga
     1141 gctgatcgtg cgcggcaatg gtcacggcat ttccaacggg ctcgaactgg ccagcccgca
     1201 gggcatcaag ctcaagcgcg gcgccgccgt cgggcggctg tatttccagc agcgcaccag
     1261 cgcgaaccac ggcaaggccg acaatctcat cctcgccgcg gtgatcgagc tgcgcgacca
     1321 gaatcccgac cgcccggtgg tgctggtcag caaggacatc aacctgcgga tcaaggcgaa
     1381 gatctacggc atcgacgccg aggattacga gaacgaccgc gcgctggatg acttcgccct
     1441 gctgttcacc ggctccgccg cgctgcccga ggatttctgg gaccgccacc ccgaggtgca
     1501 gtcgtggaac gagcgcggcc acacttatta caagctcgac caccgcgagg acgaggactg
     1561 gtacccgaac gaatgcctgt acctgccgga cgacggcggc gtcgagctgc gcgtgctgaa
     1621 gatcgacgac gagcacgcga cgctggtgct gctcgacgac cacagccacg ccaaccacca
     1681 cgtgtggggc attgccgcgc gcaaccgcga gcagaatttc gcgctcaacg tgctgatgga
     1741 ccccgacgtc gacttcgtca ccctgctcgg caccgccggc accggcaaga ccctgctcgc
     1801 actggccgcc gggctggcgc aggtgatgga ccagcagcgc taccgcgaga tcatcatgac
     1861 ccgcgccacg gtgtcggtcg gcgaggacat cggcttcctg cccggcaccg aggaggaaaa
     1921 gatgacgccg tggatgggcg cgctcaccga caacctcgaa gtactcgcca atcccgagga
     1981 cggcggctcg tgggggcgcc aggccaccaa cgacctgctc gcctcgcgga tcaagatccg
     2041 cgcgctgaac ttcatgcgcg ggcgcacctt cctcagccgc tacctgatca tcgacgaggc
     2101 gcagaacctg acgccgaagc agatgaagac cctgatcacc cgcgccggcc ccggcaccaa
     2161 gatcgtgtgc ctcggcaacg tggagcagat cgacaccccg tacctcaccg agaccacctc
     2221 cggcctcacc tacgcggtgg accgcttcaa gctgtgggac cactccgcgc acgtgacgct
     2281 gcgccgcggc gagcgctcgc ggctggcgga tttcgcctct gatatcctgt aagctgccgg
     2341 ggagtggccg gcgggctgcc agctcggcag cccaccgggt ttgtaagctt ctgttaacgc
     2401 ag
//
LOCUS       DASSVL010000290         3571 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1037762,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000290 DASSVL010000000
VERSION     DASSVL010000290.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3571)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3571)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3571
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1037762"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..328
                     /locus_tag="VFM52_05015"
     CDS             <1..328
                     /locus_tag="VFM52_05015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019466636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glutamyl-tRNA reductase"
                     /protein_id="HET8764560.1"
                     /translation="AAREAEAIINLQVDRYMAWRRALGLRNPLLEMRQHAENQRDEVL
                     EKARTMLAHGKSPDEALAFLAHTLTNKLLHEPSAHLREAALAGDLDLLHSAGRLYGLD
                     ETKPQP"
     gene            396..1475
                     /gene="prfA"
                     /locus_tag="VFM52_05020"
     CDS             396..1475
                     /gene="prfA"
                     /locus_tag="VFM52_05020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019466635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003747 - translation release factor
                     activity [Evidence IEA];
                     GO_process: GO:0006415 - translational termination
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 1"
                     /protein_id="HET8764561.1"
                     /translation="MTPSIRRKLETLAERHEELGLLLAQPDVLADAGRFRELSREYAQ
                     LEPVVAALHEHDATVRELTDARALLGDAELGELAADDVARCEARLAALDGELQILLLP
                     KDPRDEANLYLEVRAGTGGDEAALFAGDLLRMYLRYAERRRWQVEVLSEHAGEKGGCK
                     EAVVRVEGRGAYSRLKFESGTHRVQRVPETESQGRIHTSAATVAILPELDEIDSIELN
                     PADLRIDTYRSSGAGGQHVNKTDSAIRITHLPTGTVVECQDERSQHKNKARAMSLLKA
                     RLLDAAQSQQAAVQAQERRLQVGSGDRSQRIRTYNFPQGRVTDHRINLTLYRLPEVLG
                     GDLDELIDALTREHQADELKALAGP"
     gene            1472..>3571
                     /locus_tag="VFM52_05025"
     CDS             1472..>3571
                     /locus_tag="VFM52_05025"
                     /inference="COORDINATES: protein motif:HMM:NF025214.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HET8764562.1"
                     /translation="MSDLTPHELAAALEHLAELLETGAAADAARLAAHTRERFPHEPE
                     PIRLHAIALLQSGQREQALQALQHAAQVAPQHIETQCNLATLELEDGDTDAAIARLRA
                     ALRHTPGHPAILHALGTALLAAGRHAQAREAFAMATHGAPTHPGVRLNLAAAELELDH
                     AAQAETHVREALQLAPELPAAHALLGYALRAQGHAADAARAFATAEHREPRNPVHAYE
                     AGLSWATAGESDAAIAAWRRALQADAGFAPALSQLVHAQRQRCDWRGLDTLTVQLRRA
                     VDDHREGVGPFAFLAEDADAAAQRRCAETYAGVIERRMAPLRQQLALQAATSAPEAPI
                     RIGLVADGFGEHATGLLLVALLEALAAGPLDVHLFATTPDDGGAIRRRLARATTVHDV
                     AGMNAARTAQAIHAASIEILFDLNGYCGKDNAELMALRAAPVQVNYLAYPGTSGAPWM
                     DYLLADAVVTPDAMRPAISENLLRLPRCYQPSDTTRYVAAAPSRAACGLPEHGTVLAC
                     FNAGYKLNPASFARFLRVLDGVPGSVLWLLSAGSAADGRLRQAAAAHGVAPARLVFMP
                     HLPHAEYLARYALADLFLDTLPYNAHTTASDALWAGCPVLTLRGETFAGRVAASLLEH
                     VGLAELVAADEAAFIAGAIELGRDPDALATLRRYLAQQGRASALFDMPGYARDFERAV
                     QWISARHRAGLAPEDHDF"
BASE COUNT          544 a         1383 c         1198 g          446 t
ORIGIN      
        1 ggcggcacgc gaagccgagg ccatcatcaa cctgcaggtg gaccgctaca tggcgtggcg
       61 gcgcgcgctc ggcctgcgca atccgctgct ggaaatgcgc cagcacgcgg aaaaccagcg
      121 cgacgaagtg ctggagaagg cgcgcaccat gctggcccac ggcaagtcgc ccgacgaggc
      181 gctggcgttc ctcgcccaca cgctcaccaa caagctgctg cacgagccca gcgcgcacct
      241 gcgcgaggcc gcgctggccg gcgacctcga cctgctgcac tcggccggcc gcctgtacgg
      301 gctggacgaa accaagccgc agccctagcc gggcgatgcg ctgcaccgcc ggcgtgccgg
      361 gcatgccggc gttcccccct tcaccgccgc cacgcatgac gccttcgatc cgccgcaaac
      421 tggaaaccct ggccgagcgc cacgaagagc ttggcctctt gctggcgcag cccgacgtgc
      481 tcgccgacgc cgggcgcttt cgcgagctgt cgcgcgaata cgcccagctc gaaccggtgg
      541 tggcggcgct gcacgagcac gacgcgacgg tgcgcgaact caccgacgcg cgcgccctgc
      601 tgggcgacgc cgagctgggc gagctggcgg ccgacgatgt cgcgcgctgc gaggcgcggc
      661 tggccgcgct cgatggcgag ctgcagatcc tgctgctgcc gaaggatccg cgcgacgagg
      721 ccaacctgta tctcgaagta cgcgccggca ccggcggcga cgaggccgcg ctgtttgccg
      781 gcgacctgtt gcgcatgtac ctgcgctacg ccgagcgccg ccgctggcag gtcgaggtgc
      841 tgagcgagca cgccggcgaa aagggcggct gcaaggaggc cgtggtgcgc gtcgagggcc
      901 gcggcgcgta ctcgcggctc aagttcgaat ccggcaccca ccgcgtgcag cgcgtgccgg
      961 aaaccgaatc gcaggggcgc atccacacct cggcggccac cgtggcgatc ctgcccgagc
     1021 tggacgagat cgactcgatc gagctgaacc cggccgacct gcgcatcgac acctaccgtt
     1081 cttccggcgc cggcggccag cacgtcaaca agaccgactc ggcgatccgc atcacccacc
     1141 tgcccaccgg cacggtggtc gaatgccagg acgagcgcag ccagcacaag aacaaggcgc
     1201 gcgcgatgag cctgctgaaa gcgcgcctgc tcgacgccgc gcaatcgcag caggctgcgg
     1261 tgcaggcgca ggaacgccgc ctgcaggtcg gctcggggga ccggagccag cgcatccgca
     1321 cctacaactt cccgcagggg cgggtcaccg accaccgcat caacctcacc ctgtaccgcc
     1381 tgcccgaggt gctcggcggc gacctcgacg aactgatcga tgcgctgacg cgcgagcacc
     1441 aggcggacga gctgaaggcg ctggccggcc catgagcgac ctcactccac atgaactcgc
     1501 cgccgccctc gagcacctcg cggagttgct tgagacgggc gctgccgcgg acgccgcccg
     1561 tcttgcggcg cacacccgcg aacgcttccc gcacgaaccc gagccgatcc gcctgcacgc
     1621 catcgcgctg ctgcaatccg gccagcgcga acaggccttg caggcgctgc agcacgcggc
     1681 ccaggtcgcg ccgcagcaca tcgaaaccca gtgcaatctc gccacgctcg aactggagga
     1741 tggcgacacc gacgcggcca tcgcacgcct gcgcgcagcg ctgcgccaca cgcccggcca
     1801 tccggccatc ttgcacgcgc tgggcacagc attgctggcc gccgggcgcc acgcgcaggc
     1861 gcgcgaagcc ttcgcgatgg ccacccacgg tgcgccaacc caccccggcg tacgcctcaa
     1921 cctggccgcg gccgagctgg agctcgacca tgcggcccag gccgaaaccc acgtgcgcga
     1981 agcgctgcag cttgcgcctg agctgccggc tgcgcacgcg ctgctcggct acgccctgcg
     2041 cgcacaaggg cacgctgccg acgctgcccg cgccttcgcc accgccgaac accgcgagcc
     2101 gcgcaacccg gtgcacgcct acgaagccgg cctgtcgtgg gccaccgccg gcgagtccga
     2161 cgccgcgatc gcggcgtggc gccgcgcgct gcaggccgat gccggcttcg caccggcgct
     2221 cagccaactg gtgcatgcgc agcgccagcg ctgcgactgg cgcgggctgg acaccctcac
     2281 cgtgcagctg cggcgcgcgg tggacgacca ccgcgagggc gtcggcccat ttgccttcct
     2341 tgccgaagac gccgatgccg ccgcgcaacg ccgctgcgcc gaaacctacg ccggggtgat
     2401 cgagcgccgc atggcgccgc tgcgccaaca gctcgcactg caagccgcca cgtccgcgcc
     2461 ggaggcaccg atccgcatcg gcctggtggc cgacggtttc ggcgaacacg ccaccggcct
     2521 gctgctcgtc gccctgctcg aagcactcgc cgccggcccg ctcgacgtgc acctgttcgc
     2581 gaccacgccc gacgacggcg gcgcgatccg ccggcgactc gcgcgcgcca ccaccgtaca
     2641 cgacgtcgcc gggatgaatg ccgcgcgcac ggcacaggcc atccacgccg ccagcatcga
     2701 gatcctgttc gacttgaacg gctactgcgg caaggacaac gccgagctga tggcgttgcg
     2761 cgcggcgccg gtgcaggtga attacctcgc ctaccccggc accagcggcg cgccgtggat
     2821 ggattacctg ctggctgatg ctgtcgttac gcccgacgcg atgcgcccgg cgatcagcga
     2881 aaacctgctg cgcctgccgc gctgctacca gcccagcgac accacgcgct acgtagcggc
     2941 ggcgccgtcg cgcgccgcct gcggcctgcc cgaacacggc accgtgctgg cctgcttcaa
     3001 cgccggctac aagctcaacc cggcgtcgtt cgcgcgcttc ctgcgggtgc tcgacggcgt
     3061 gcccggcagc gtgctgtggc tgctgtccgc cggcagcgcc gccgacgggc gcctgcgcca
     3121 ggccgccgcc gcgcatggcg tcgcgccggc gcggctggtg ttcatgccgc acctgccgca
     3181 tgccgaatat ctggcgcgct acgccttggc cgacctgttc ctcgacaccc tgccgtacaa
     3241 cgcgcacacc acggcatccg acgccttgtg ggccggctgc ccggtgctga cgctgcgcgg
     3301 cgagaccttc gccggccgtg tcgccgcgag cctgctcgaa cacgtcggcc tggcggagct
     3361 ggttgccgcg gacgaggccg cgttcatcgc cggcgcgatc gagcttggcc gcgatccgga
     3421 tgcgctggcg acgctgcgcc gctatctcgc gcaacagggc cgcgcgagcg cgttgttcga
     3481 catgccgggc tacgcccgcg atttcgagcg cgcggtgcag tggatcagcg cgcgccaccg
     3541 ggccggcctc gcgccggagg atcacgactt t
//
LOCUS       DASSVL010000291         4692 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1249596,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000291 DASSVL010000000
VERSION     DASSVL010000291.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 4692)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4692)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4692
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1249596"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..198
                     /locus_tag="VFM52_05030"
     CDS             <1..198
                     /locus_tag="VFM52_05030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8764563.1"
                     /translation="AIKELFELLHAGDINLRQVFDAVPFRISFHNPKGTQMSEMELRP
                     LTEAKRGGIVTRIMKKVTGRT"
     gene            complement(254..1621)
                     /locus_tag="VFM52_05035"
     CDS             complement(254..1621)
                     /locus_tag="VFM52_05035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007808120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HET8764564.1"
                     /translation="MRFSTLSLCSLLLAAPLAYAQNAPAPATSAPEAPTDLAPTHVRA
                     DAAKADDKPIDLQDIRRFSRVYDIVRQAYVEPVSNHDLMKDAITGMLAGLDPHSEYLD
                     KEGLAQLDEDTTGQYSGLGIEVLQQDGGLLIVTPIDDTPASRAGIKPGDSIVKIDGTL
                     VDPQNVDTMFKKLRGKPGTKITLTVLHKGSDTPVDMPLTRENIAITSVKVRQLEPGYD
                     YIRITQFQSDTGADLERKLAALVTKDGTPKGAVLDLRNNPGGLLTAAVSVSDDFLDSG
                     TIVTTRGRLPDANMSFAAHPGDLLNGAPLVVLVNHGTASAAEIVSGALKDNHRALLMG
                     QRTFGKGVVQTVLPLDADHAVKLTTARYYTPNGTSIQAEGIKPDIPLADLTVHKVDQA
                     PALIDSEADLPHHLANENAKAGANIDADGSAAEGTLATSDYALAQALNVLKGMALGRG
                     AAVAK"
     gene            complement(1828..3051)
                     /locus_tag="VFM52_05040"
     CDS             complement(1828..3051)
                     /locus_tag="VFM52_05040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007808119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HET8764565.1"
                     /translation="MPRLASFLSLPALAGLVLATGLAAAPALARQDKAQTEQAAAKQK
                     LGNVQQELKTLGKQQAETATQRTTLNDELAKQTTALAAAVKALRQTDAELAAKQRQLD
                     ELQQQRADLKQKLDGQKAAIADLLRASYALGHGSDLRTLLDGADTSRIARALTYSKYF
                     QADRVQKVQQLVAGLAQLQTLEAQITAEQQALQAERAKREQQNRQLAQQRAAQQKLAA
                     AADATYQNQAQRLAALKQDEHSLNSLVDRLQKQIDQAMREAAAREVARQAEARKHGGK
                     APPPLAVGGAGQNIRGNLPWPAAGEVHSYGNGVLIRAPGGSEVRAVANGRVVYAGFLR
                     GYGMLLILNHGNGWMSMYGNNEALLHGVGDAVKAGEAVGTAAAATGLNTGAYFELRHD
                     GKPVDPRSWLGKRGG"
     gene            3154..4383
                     /locus_tag="VFM52_05045"
     CDS             3154..4383
                     /locus_tag="VFM52_05045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018971902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside recognition domain-containing
                     protein"
                     /protein_id="HET8764566.1"
                     /translation="MLNRLWYGFFLAAALAALARWLVGGDAGVFAAIVAALFDMADLS
                     VKVMLLLFGTLTLWLGFLRIAEQAGLIERLALWLGPLFARLMPEVPRGHPAIGLITLN
                     FAANALGMDNAATPIGLRAMRELQTLNPSRDTASNAQILFLVLNASSLTLLPVTIFMY
                     RAQAGAPDPTLVFLPILLATSASTLAGFFSVAFVQRLRVRDPVVLAWLGGTALVLGGF
                     MALLASLSAAALAAFSGLLGNLMLFGVIVLFLCAGAYKRVPLFDSFVEGAKQGFEVSK
                     NLLPYLVAMLCAVGVLRASGVLDFALEGIRWVAVHAHLDTRFVDALPTALVKPFSGSA
                     ARAMLIETMHHYGVDSFPALLAATVQGSTETTFYVVAVYYGAVGISRVRHTIGCALLA
                     DLAGMLAAIAVCYWFFG"
     gene            complement(4390..>4692)
                     /locus_tag="VFM52_05050"
     CDS             complement(4390..>4692)
                     /locus_tag="VFM52_05050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007510286.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UTRA domain-containing protein"
                     /protein_id="HET8764567.1"
                     /translation="GGEPLAVECSTVPADVLPDPALVRGSLYEALDRLGHRPQRATQH
                     LRVVPLAGQQARQLSVPSGTVGMYVERKGFAHDGRAVEFSCSWYRGYLYSFVDDLR"
BASE COUNT          600 a         1556 c         1672 g          864 t
ORIGIN      
        1 gctatcaagg agttgtttga attacttcac gcaggagata tcaatcttcg ccaagtattt
       61 gatgcagtgc catttcggat ttcatttcat aatccgaaag gcacccagat gagtgaaatg
      121 gaattgcgac cactcacaga agcgaaaagg ggcggcattg tcacccgaat catgaagaag
      181 gtcaccggac gcacataact cttgcgaatc agagtttcag gttcacttgc tggaggcaga
      241 tcaggttgtg cgattacttc gccaccgccg cgccgcgccc aagcgccatg cccttcagca
      301 cgttcagcgc ctgcgccagc gcgtagtcgc tggtggcgag cgtgccctcg gcggcgctgc
      361 cgtcggcgtc gatgttggcg ccggccttcg cgttctcgtt ggcgaggtgg tgcggcaggt
      421 cggcctcgga atcgatcagc gccggcgcct ggtcgacctt gtgcaccgtg aggtcggcga
      481 gcgggatgtc gggcttgatg ccctcggcct ggatcgaggt gccgttcggc gtgtagtagc
      541 gcgcggtggt gagcttcacc gcgtggtcgg cgtcgagcgg cagcacggtc tgcaccacgc
      601 ccttgccgaa cgtgcgctgg cccatcagca gcgcgcggtg gttgtccttc agcgcgccgg
      661 aaacgatctc cgcggccgat gccgtgccgt ggttcaccag caccaccagc ggcgcgccgt
      721 tcaacaggtc gccgggatgc gcggcaaagc tcatgttcgc gtccggcagg cggccgcggg
      781 tggtgacgat ggtgcctgag tcgaggaagt cgtcgctgac cgacaccgcc gccgtcagca
      841 gtccgccggg attgttgcgc aggtcgagca ccgcgccctt cggcgtgccg tccttggtga
      901 cgagcgccgc gagcttgcgt tcgaggtcgg ccccggtgtc gctctggaac tgggtgatgc
      961 ggatgtagtc gtagccgggt tcgagctggc gcaccttgac gctggtgatg gcgatgttct
     1021 cgcgcgtcag cggcatgtcc accggggtgt cgctgccctt gtgcagcacg gtcagcgtga
     1081 tcttggtgcc gggcttgccg cgcagcttct tgaacatcgt gtcgacgttc tgcgggtcga
     1141 ccagggtgcc atcgatcttg acgatgctgt cgcccggctt gatgccggcg cgcgaggcgg
     1201 gcgtgtcgtc gatcggggtg acgatcagga gaccaccatc ctgctgcagc acctcgatgc
     1261 cgaggccgct gtactgcccg gtggtgtcct cgtcgagctg ggcgaggcct tccttgtcga
     1321 ggtattcgct gtgcgggtcg agcccggcga gcatgccggt gatcgcatcc ttcatcaggt
     1381 cgtggttcga gaccggctcc acgtaggcct ggcgcacgat gtcgtacacc cggctgaagc
     1441 ggcggatgtc ctgcaggtcg atcggcttgt cgtccgcctt ggcggcgtcg gcgcgcacat
     1501 gggtgggggc aaggtcggtg ggagcctcgg gcgcgctggt ggcgggtgcc ggggcgtttt
     1561 gcgcgtaggc caacggggcc gcgagcaaca gcgagcacag actcaaggtg gaaaaccgca
     1621 tgcaaccact ccacagggac aggggatacg taccgttcgc gcggccgcac ccggcaatgc
     1681 cagcctgcga cgtctgcggg cagccgtcaa cggtcgccgg tcatgctgtg cggcgccacg
     1741 cggccgttgg ggaaaaggcc acttttcggt catgcccacg ccagcccggc gccaccccgc
     1801 gaccgttgcg cgcctgcgtc caggaagtca gccaccgcgt ttgccgagcc aactgcgcgg
     1861 gtcgaccggc ttgccgtcgt gacgcaactc gaagtacgcg ccggtattga ggccggtggc
     1921 tgccgccgcg gtgccgaccg cctcgccggc cttcaccgcg tcgcccacgc cgtgcagcag
     1981 cgcttcgttg ttgccgtaca tgctcatcca gccgttgccg tggttgagga tgagcagcat
     2041 gccgtagccg cgcaggaaac cggcgtagac cacgcggccg ttggccaccg cgcgcacctc
     2101 gctgccgccc ggcgcgcgga tcagcacgcc gttgccgtag ctgtgcacct cgccagcggc
     2161 cggccacggc aggttgccgc ggatgttctg cccggcgccg cccacggcca gtggcggtgg
     2221 cgccttgccg ccgtgcttgc gcgcctcggc ctggcgcgcc acctcgcgcg cggcggcttc
     2281 gcgcatggct tggtcgatct gcttttgcag gcggtcgacc agcgagttca gcgaatgctc
     2341 gtcctgcttc agcgcggcca gccgctgggc ctggttctgg taggtggcat cggctgcggc
     2401 cgccagcttc tgctgcgcgg cgcgctgctg cgcgagctgg cggttctgct gctcgcgctt
     2461 cgcccgctcg gcctgcagcg cctgctgctc ggcagtgatc tgcgcttcca gcgtctgcag
     2521 ctgtgccagg ccggcaacca gctgctgcac cttctgcacg cggtcggcct ggaaatactt
     2581 ggagtacgtg agcgcacggg cgatgcggct ggtgtccgcg ccgtcgagca gggtgcgcag
     2641 gtcggagccg tggccgaggg catagctcgc gcgcaggagg tcggcgatgg cggccttctg
     2701 gccgtccagc ttctgcttga ggtcggcgcg ctgctgctgc agctcgtcga gctggcgctg
     2761 cttggcggcg agttcggcat cggtctggcg cagggctttc acggcagcgg cgagcgcggt
     2821 ggtctgcttc gccagctcgt cgttgagcgt cgtgcgctgg gtcgcggtct cggcctgctg
     2881 cttgccgagc gtcttcagct cctgctgcac gttgccgagc ttctgcttcg ccgcggcctg
     2941 ctcggtctgc gccttgtcct ggcgggccaa ggcgggcgcc gcggccaatc cggtggcgag
     3001 cacgaggccg gcgagggcgg gcagtgacag gaacgaggcg aggcgtggca tcggcggatt
     3061 atcgccgagc cggccggcac ccgcgagcgg ccgcgtacgc ggccacggcg cggatcacgc
     3121 acaatgcgcg ggtttcccgg cggcgcgagg cgcatgctca atcggctctg gtacgggttc
     3181 ttcctcgccg cagcgctggc ggcgctggcg cgctggctgg tcggcggcga cgccggcgtg
     3241 ttcgccgcga tcgtcgccgc gctgttcgac atggccgacc tgagcgtcaa ggtgatgctg
     3301 ctgctgttcg gcacgctcac gctgtggctg ggtttcctgc gcatagccga gcaggccggg
     3361 ctgatcgagc gcctggcgtt gtggctcggc ccgctgtttg cgcggctgat gcccgaggtg
     3421 ccgcgcgggc acccggcgat cggcctgatc acgctgaatt tcgccgcgaa cgcattgggc
     3481 atggacaacg cggcgacgcc gatcggcctg cgcgcgatgc gcgagctgca gaccctgaac
     3541 ccgtcgcgcg acaccgcgag caacgcgcag atcttgtttc tcgtgctgaa tgcctcctcg
     3601 ctcacgctgt tgccggtgac gatcttcatg taccgcgcgc aggcgggcgc gcccgacccg
     3661 acgctggtgt tcctgccgat cctcctggcg accagtgcct cgacgctggc cgggttcttc
     3721 agcgtggctt tcgtgcagcg cctgcgcgtg cgcgatccgg tggtgctggc gtggctcggc
     3781 ggcaccgcgc tggtgctcgg cggcttcatg gcgctgctgg cctcgctgtc cgccgccgcg
     3841 ctggcggcgt tttccgggct gctcggcaac ctcatgctgt tcggcgtgat cgtgctgttc
     3901 ctgtgcgccg gcgcgtacaa gcgcgtgccg ctgttcgaca gcttcgtgga gggcgcgaag
     3961 cagggcttcg aggtgtcgaa aaacctgctg ccctatctcg tcgcgatgct gtgcgcggtc
     4021 ggcgtgctgc gcgcgtccgg cgtgctcgac ttcgcgctcg agggtattcg ctgggtggcc
     4081 gtccacgccc atctcgacac ccgtttcgtc gatgcgctgc ccaccgcatt ggtcaagccg
     4141 ttctccggca gcgccgcgcg cgcgatgctg atcgagacca tgcaccacta cggcgtggac
     4201 agcttccccg cgctgcttgc cgccaccgtg cagggcagca ccgaaaccac gttctacgtg
     4261 gttgccgtct actacggcgc ggtcggcatc agccgcgtgc gccacaccat tggctgcgcg
     4321 ctgctggccg atcttgccgg catgctcgcg gcgatcgcgg tgtgctactg gttcttcggc
     4381 tgaggccggt cagcgcaggt cgtcgacgaa gctgtacaga tacccgcgat accacgagca
     4441 cgagaactcg acggcgcgcc catcgtgggc gaagcccttg cgttcgacgt acatgccgac
     4501 ggtgccggag ggcaccgaca gctggcgggc ctgctgaccg gcgagcggca ccacgcgcag
     4561 gtgctgggtg gcgcgttgcg ggcgatggcc caggcggtcg agcgcctcgt acagcgagcc
     4621 gcgcaccagc gccgggtcgg gcagcacgtc cgccggcacg gtgctgcatt ccaccgccag
     4681 cggctcgccg cc
//
LOCUS       DASSVL010000292         7584 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_642315, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000292 DASSVL010000000
VERSION     DASSVL010000292.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 7584)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7584)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7584
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_642315"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            214..1320
                     /locus_tag="VFM52_05055"
     CDS             214..1320
                     /locus_tag="VFM52_05055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007808745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine dehydrogenase"
                     /protein_id="HET8764568.1"
                     /translation="MLLPRTDPRRRRTLAVGVIGPGRVGSALLEQLRTAQPRLERDHA
                     LDLRLRGVVARRQMWLDCDDAELNARHGGAQTWRPNDLDAFANHVRGTDGRHALLVDC
                     SASDEVAAFYPRWLAAGIHVVTPNKLAGSGPLKRWQAIRHACAESGARFRYEATVCAG
                     LPVVQTLRDLLDTGDQLLAVHGMFSGTLAWLCNRHDGAQPFSALVREAHALGYTEPDP
                     RDDLSGLDVARKLVILAREAGWPLTLEDVDLESLVPAELAALPRDAFMQQLEQLDAPM
                     AAKLAAARAQGGVLRHVAQLDRDGHASVKLQALPATHAFAHTRLTDNIVQYTTRRYCD
                     NPLCVQGPGAGPEVTAAGVFGDLLRIAESLEARA"
     gene            1317..2300
                     /locus_tag="VFM52_05060"
     CDS             1317..2300
                     /locus_tag="VFM52_05060"
                     /EC_number="2.7.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015448974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004413 - homoserine kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006566 - threonine metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine kinase"
                     /protein_id="HET8764569.1"
                     /translation="MNAILLEPSMSRPRVNPTRAACAFAPASVGNVGVGFDLLGHSLA
                     GAGDRARVRRIDTPEVRIAAIHGCVVDLPRDPARNTAGAALLSLRAALGLDHGFELTL
                     HKGIALGSGMGGSAASCVAALVAANALLEKPLSREALYRFALDGEAVSSGSRHGDNLG
                     PMLLGGLVLASPERLVRWSVPRAWYCALVHPHVVLETRRARAALAGSYELHDFVMQST
                     NLALVLAGCARGDASLVRDGLKDVLVEPRRAPLIPHFAQVKQAALDHHALGASISGAG
                     PSVFGWYENRALAEAAAGAMQTAFADGGLESDAWVSPINGPAASLVDEELP"
     gene            2426..3721
                     /gene="thrC"
                     /locus_tag="VFM52_05065"
     CDS             2426..3721
                     /gene="thrC"
                     /locus_tag="VFM52_05065"
                     /EC_number="4.2.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017460666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004795 - threonine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009088 - threonine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="threonine synthase"
                     /protein_id="HET8764570.1"
                     /translation="MSTRGGAPAASISAAIAAGLAPDGGLYVPEALPQVDSAAFDPHG
                     TLADTAATLLAPFFAGDPLAAELPAICAEALTFDTPLRALPAHPHSAMLELFHGPTSA
                     FKDVGARFLAACLRRLPRADHRPLTILVATSGDTGAAVGAAFFHQPNLRVVILYPDGR
                     VSPRQAHQLGSFGDNVQALRVAGRFDDCQRMVKAALGDAELQAAVPLSSANSISLGRL
                     LPQMSYYAYAALAWRREHGEALNFVVPTGNLGNALACLWARAVGLPIGEVRLACNANA
                     TLPEFFAGGEYAPREAVATLANAMDVGAPSNFERLRWTFGDDVTLRRALTAVNVDDAT
                     IRHTISCHAHEHGEVFCPHTATAMHVLDALRGHGDARPWAVVSTAHPAKFDSVVEPLV
                     GHAVPPPPALVAMLERSASAAPLAAEPDALKQWLRHRDR"
     gene            3830..4450
                     /locus_tag="VFM52_05070"
     CDS             3830..4450
                     /locus_tag="VFM52_05070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007080462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XrtA/PEP-CTERM system exopolysaccharide export
                     protein"
                     /protein_id="HET8764571.1"
                     /translation="MKRLVTLVVGLAALALAGCASVQPSTQPPPITRTTGVTQYEIGV
                     DDQLQVSVWNNPELGVSVPVRPDGKITVPLIGDVQAGGKTPEQVAADIQQKLKAYVRD
                     PQVAVILTQLRSHEYLARVRVTGAVRNPASLSYRPGMTVLDVVLAAGGVTEFAAPDRT
                     ELYRETGTTTSQAYAVQLGKILNDGNLKTNYPLQPGDVITVPQRSF"
     gene            4495..6042
                     /locus_tag="VFM52_05075"
     CDS             4495..6042
                     /locus_tag="VFM52_05075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017460548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XrtA system polysaccharide chain length
                     determinant"
                     /protein_id="HET8764572.1"
                     /translation="MNEQPVSIQALAPVLLEEARRRRVAVAAVFAAIALVALVVGTLW
                     PKKYEASTTVLVQESNIIAPLMRGAATPTGTVNRADIARAVILSQSSLQKVLVAGGWM
                     ASHPTPVELDHITTGIKDRTTVKFSRDNLLTIHYYDSDPERAYQVTKLFGELFISDSL
                     ASKQRESRDAFDFINGQVQAYKRKLTSAEDKLKVYREANADARPGSEAASSSRINDLR
                     AQVENTRMDLMEKRSQEASLVAQLSGESEVSAVQTTAGVYQAQLAELQGKLDKLLLTY
                     TNDYPDVVRIRHQMQDLRQQLAQANARRLATHGGKPTALDASVQINPLYQQMKGDLAS
                     LRGQIAATTARLNASQAMLDGELARSRRIAGSENVTAELTRDYDVNRDVYQDLLKRRE
                     NARVSMDLDATKQGLTFTVQNPATKPLLPTGLRFAHFAAAGIALGLAVPFGLLFGVAR
                     FDPRVRSAEQLERLTGLQVLATVPYYATPEDKRREHARNLKLAAILAIVGLAYLILLM
                     LKLKGAA"
     gene            6039..6815
                     /locus_tag="VFM52_05080"
     CDS             6039..6815
                     /locus_tag="VFM52_05080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017460547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide biosynthesis protein"
                     /protein_id="HET8764573.1"
                     /translation="MKSEESRGTNVVRMSDDAVAAGDHLPQALTSRSIALMAEPHALA
                     PRQLEERRLIHRDASSRVQSDTFRELRTRLLGLAGSGNFTTLVVGVSPGCGASFVARN
                     LAAAFALDESKTSLLIDCNLRYPDQHRALDVAAANGGLVDFLDQPSQGIGAKIYATGV
                     PRLRLIPAGDSREDGGEYFSSFRMQALMQSLRSRYADRYLFLDGPAVKGSPDARILSE
                     LADFVLVVTGYGHDTPAAITQAVAHFPPEKFAGVVFNRVP"
     gene            6889..>7584
                     /locus_tag="VFM52_05085"
     CDS             6889..>7584
                     /locus_tag="VFM52_05085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8764574.1"
                     /translation="MSSNKLSCAVALALLSSSAHAATSQFDYDIYTGILHSDNITLVN
                     QQPISQSVLIPGVDFTWNQQGADLRANAVGNIEYRDYLGSRFTNQTAVQLTSQALWTL
                     SPQRLDLSIQDYAGIEPLDSLANDRPSNRQQTNVFIVGPVFHFRLGTALHGQAELRYL
                     NSYAEKTDNFNSNRVQGALRVIRDISPTSQFSLNLDGQKVDLYEDTIDPNYSRYEAYG
                     HYVSKLTSLDLDLE"
BASE COUNT         1200 a         2835 c         2480 g         1069 t
ORIGIN      
        1 catcgccagc accattacca ccacgattac caccggtacc ggtacctggt ccgggcggag
       61 cgtcgtgcgt agctgagttt tcccacgcaa cggcccgccc tcgacgaggc gggccggcac
      121 acaccgacac gccagacagg acgggcctcc aacggagagg ccgtcgtgat cacctgtgcc
      181 atcgagcaag ttccgcccgc tgcgctgccc cccatgctgt tgccgcgcac cgacccgcgc
      241 cgccggcgca cgctggccgt cggcgtgatc ggcccggggc gggtcggcag cgccctgctg
      301 gaacaactgc gcaccgcgca gccgcggctg gaacgcgacc atgcgctgga cctgcgcctg
      361 cgcggcgtgg tggcacgccg ccagatgtgg ctggactgcg acgacgccga actcaacgcg
      421 cgccacggcg gcgcgcagac ctggcgcccg aacgacctgg atgcgttcgc caaccacgtg
      481 cgcggcaccg atggccgcca cgcgctgctg gtcgattgca gcgccagcga cgaagtcgcc
      541 gcgttctatc cgcgctggct ggccgccggc atccacgtgg tcacgccgaa caaactggca
      601 ggcagcggcc cgctcaaacg ctggcaggcg atccgccacg cctgcgcgga aagcggcgcg
      661 cgtttccgct acgaggccac ggtgtgcgcc gggctgccgg tggtgcagac gctgcgcgac
      721 ctgctcgaca ccggtgacca gctgctcgcc gtgcacggca tgttctccgg cacgctggct
      781 tggctgtgca accgccacga cggcgcacag ccgttctcgg cgctggtgcg cgaggcgcac
      841 gcgctgggct acaccgagcc cgatccgcgt gacgacctgt ccgggctgga tgtggcgcgc
      901 aagctggtga tcctcgcccg cgaggccggc tggccactga cgctcgaaga cgtcgacctg
      961 gaaagcctgg tgccggccga actcgcggcc ctgccgcgcg acgcgttcat gcagcaactc
     1021 gaacagctcg atgcgccgat ggcggcaaag ctggccgcgg cccgcgcgca gggcggcgtg
     1081 ctccgccacg tcgcccagct cgaccgcgac ggccacgcca gcgtcaagct gcaggcgctg
     1141 ccggccacgc atgcctttgc gcacacccgg ctcaccgaca acatcgtgca gtacaccacg
     1201 cgccgctact gcgacaatcc gctgtgcgtg caaggccccg gcgccggccc cgaagtcacc
     1261 gccgccggcg tgttcggcga cctgttgcgg atcgccgaat cactggaggc ccgcgcatga
     1321 acgccattct tctggaaccc tcgatgtccc gtccccgcgt caaccccacc cgcgccgctt
     1381 gcgcgttcgc ccccgccagc gtcggcaatg tcggcgtcgg tttcgatttg ctcggccaca
     1441 gcctcgccgg cgccggcgac cgcgccaggg tgcgtcgcat cgacacgccg gaggtgcgca
     1501 tcgcggcgat ccacggctgc gtcgtcgacc tgccgcgcga ccccgcacgc aacacggcgg
     1561 gcgccgcgct cctgtcgctg cgtgcggcgc tcggcctcga ccacggcttc gaactgacgc
     1621 tgcacaaggg catcgcgctc ggctccggca tgggcggctc ggcggcctcg tgcgtcgccg
     1681 cgctggttgc cgccaacgcg ctgctggaaa agcccctgtc gcgcgaggcg ctgtaccgct
     1741 ttgcgctgga tggcgaggcg gtgtccagcg gcagccggca cggcgacaac ctcggcccga
     1801 tgctgctcgg cgggctggtg ctggccagcc cggaacggct ggtgcgctgg tcggtgccgc
     1861 gcgcatggta ctgcgcgctg gtgcacccgc acgtggtgct ggaaacccgc cgcgcgcgcg
     1921 ccgcgctggc cggcagctac gagctgcacg acttcgtcat gcagagtacc aatctcgcgc
     1981 tggtgctcgc cggctgcgca cgtggcgacg catcgctggt gcgcgacggc ctcaaggacg
     2041 tgctggtcga gccgcgccgc gcgccactga ttccgcattt cgcgcaggtg aagcaggccg
     2101 cgctcgatca ccatgcgctc ggcgccagca tctccggcgc cggacccagc gtgtttggct
     2161 ggtacgagaa ccgcgccctg gccgaagccg cggccggcgc gatgcaaacg gcgttcgccg
     2221 atggcggact ggaaagcgac gcctgggtct cgccgatcaa cggcccggcc gccagcctgg
     2281 tcgacgagga actgccatga cccagcgccc cactggtggc ggcaggaacc cgctcgcggg
     2341 caatgcgctt gaagcccgga tcggggatgc gcaagagccc cgcccgcaag cgggctccga
     2401 cacgggcacg cgcaggcgcg cgtacgtgag cacgcgtggc ggcgcgccgg ccgcctcgat
     2461 cagcgccgcg atcgccgccg gcctcgcgcc ggacggcggc ctgtacgtgc cggaagcgtt
     2521 gccacaggtc gattccgctg cgttcgaccc gcacggcacg cttgcggata ccgccgccac
     2581 cttgctcgcg ccgtttttcg ccggcgaccc gctggctgcc gagctgccgg cgatctgtgc
     2641 ggaagcactc accttcgaca ccccgctgcg cgcgctgccg gcgcatccgc acagcgcgat
     2701 gctggagttg ttccacgggc cgacctcggc gttcaaggac gtcggcgcgc gcttcctcgc
     2761 cgcctgcctg cgccgcctgc cgcgcgcgga ccaccggccg ctgacgatcc tcgtcgccac
     2821 ctcgggcgac accggcgccg cggtcggcgc cgcgttcttc caccagccga acctgcgcgt
     2881 ggtgatcctg tacccggacg ggcgggtctc gccgcgccag gcgcaccagc tcggctcctt
     2941 cggcgacaac gtgcaggcgc tgcgcgtggc cggccgcttc gacgattgcc agcgcatggt
     3001 caaggcggcg ctgggcgatg ccgagctgca ggccgcggtg ccgctcagct cggcgaacag
     3061 catcagcctc ggccggctgc tgccgcagat gagctactac gcgtacgcgg cgctggcctg
     3121 gcggcgtgag cacggcgaag cgctgaactt cgtggtgccc accggcaacc tcggcaatgc
     3181 gctggcctgc ctgtgggcgc gcgcggtcgg cctgccgatc ggcgaggtgc gcctggcctg
     3241 caacgccaac gccacgctgc cggaattctt cgccggcggc gagtacgccc cgcgcgaggc
     3301 ggtcgccacc ctcgccaacg cgatggacgt cggcgcgccc agcaacttcg agcgcctgcg
     3361 ctggaccttc ggcgacgacg tcaccctgcg ccgcgccctg accgcggtga acgtcgacga
     3421 cgccacgatc cgccacacca tcagctgcca cgcccacgag cacggcgaag tgttctgccc
     3481 gcacaccgcc accgcgatgc acgtgctcga cgccctgcgc ggccacggcg acgcccgacc
     3541 gtgggccgtg gtttccaccg cccaccccgc caagttcgac agcgtggtcg agccgctggt
     3601 cggccacgcc gtgccgcccc cgccggcgct ggtcgccatg ctcgagcgct cggccagcgc
     3661 cgccccgctg gcagccgagc cggacgcgct gaaacagtgg ctgcggcaca gggatcgctg
     3721 accccggggc gcggccggcg ccgactaccg gtccgttttt cccggatgca tttccacagg
     3781 ccgattaccg tatactgtga actgcatcac atttcagggg acggaccgta tgaaacgact
     3841 cgtgacgctc gtcgtggggc tggccgcgct ggccctggcc ggttgcgcct cggtgcaacc
     3901 ctcgacgcaa ccgcccccga tcacgcggac caccggggtc acccagtacg agatcggggt
     3961 ggacgaccag ttgcaggtct cggtgtggaa caaccccgag ctcggtgtgt cggtgccggt
     4021 gcgccccgac ggcaagatca ccgtgccgct gatcggcgac gtgcaagccg gcggcaagac
     4081 gccggagcag gtggcggcgg atatccagca gaagctcaag gcctacgtgc gtgatccgca
     4141 ggtcgcggtg atcctgaccc agctgcgcag ccacgaatac ctcgcccgcg tgcgcgtcac
     4201 cggcgccgtg cgcaatccgg catcgctgtc gtatcgcccc ggcatgacgg tgctcgacgt
     4261 ggtgcttgcc gccggcggcg tcaccgagtt tgccgcgccg gaccgcaccg agctgtaccg
     4321 cgagaccggc accacgacca gccaggcgta tgccgtgcag ctcggcaaga tcctcaacga
     4381 cggcaatctc aagacgaatt acccgctgca gcctggtgac gtcatcaccg ttccgcaacg
     4441 cagcttctga cctgggtctt accccggagc cgcctcaggg gggtggcaaa cgccatgaac
     4501 gagcaacccg tttcgatcca ggcgctcgcg ccggtactgc tggaggaagc ccgccgccgc
     4561 cgcgtcgcag tcgcggccgt gttcgcggcg atcgcgctgg tcgcgctggt ggtgggcacg
     4621 ctgtggccga agaagtacga ggcctccacc accgtcctcg tgcaggaaag caacatcatc
     4681 gcgccgctga tgcgcggtgc ggccacgccg accggcaccg tcaaccgcgc cgacatcgcc
     4741 cgcgccgtca tcctgagcca gtcgtcgctg cagaaggtgc tggtcgcggg cggctggatg
     4801 gccagccatc cgacgccggt cgagctcgac cacatcacca ccggcatcaa ggaccgcacg
     4861 acggtcaagt tctcgcgcga caacctgctc accatccact actacgactc cgacccggag
     4921 cgcgcgtacc aggtgaccaa gctgttcggc gagctgttca tcagcgacag cctggcgtcg
     4981 aagcagcgcg agagccgcga cgcgttcgac ttcatcaacg gccaagtgca ggcgtacaag
     5041 cgcaagctca cctcggccga ggacaagctc aaggtctacc gcgaggccaa cgccgacgcc
     5101 cgccccggca gcgaagccgc gagctcctcg cgcatcaacg acctgcgcgc gcaggtcgag
     5161 aacacgcgca tggacctgat ggaaaagcgc tcgcaggaag catcgctggt cgcacagctt
     5221 tccggcgaat cggaagtgtc cgcggtgcag accacggcgg gcgtgtacca ggcgcagctc
     5281 gccgagttgc agggcaagct cgacaagctc ctgctgacct acacgaacga ctacccggac
     5341 gtggtgcgca tccgtcacca gatgcaggat ctcaggcagc aactcgcgca ggcgaacgcg
     5401 cgcaggctgg cgacgcatgg cggcaagccg acggcgctgg atgccagcgt gcagatcaac
     5461 ccgctctacc agcagatgaa gggtgacctg gcgtcgctgc gcggccagat cgcggccacc
     5521 accgcacggc tcaacgccag ccaggcgatg ctcgacggcg agctggcgcg cagccgccgc
     5581 atcgccggtt cggaaaacgt caccgccgag ctgacccgcg actacgacgt caaccgcgac
     5641 gtctaccagg atctcctgaa gcggcgcgag aacgcgcgcg tgtcgatgga cctggacgcc
     5701 accaagcaag gcctgacctt caccgtgcag aacccggcca ccaagccgtt gctgccgacc
     5761 gggctgcgct tcgcgcattt cgcggctgcc ggcatcgcgc tcgggctggc ggtgccgttc
     5821 gggctgctgt tcggcgtcgc acgcttcgac ccgcgcgtgc gttcggcgga gcagctcgaa
     5881 cggctaaccg ggctgcaggt gctcgccacc gtgccgtatt acgcgacgcc ggaggacaag
     5941 cgccgcgagc acgcgcgcaa cctcaagctg gccgccatcc tggccatcgt cggcctcgcc
     6001 tatctgatcc tgctcatgct gaagctcaag ggggccgcat gaagtccgaa gaatcgcgcg
     6061 gtaccaacgt cgtgcgcatg agcgacgatg ccgtcgccgc gggcgaccac ctgccgcagg
     6121 cgctgaccag ccggtcgatc gcgctgatgg ccgaaccgca tgccctggcg ccgcggcaac
     6181 tcgaggagcg ccggctgatc catcgcgacg cgtcctcgcg cgtgcagtcc gataccttcc
     6241 gtgaactgcg cacccgcctg ctcggcctgg ccggcagcgg caacttcacc acgctcgtcg
     6301 tcggcgtcag ccccggctgc ggcgccagct tcgtcgcgcg caacctggcc gcggccttcg
     6361 cgctggacga gtcgaagacc agcctgctga tcgactgcaa cctgcgctac cccgaccagc
     6421 accgggcgct ggacgtcgcc gccgccaacg gcgggctggt ggacttcctc gaccagccgt
     6481 cgcaaggcat cggcgcgaag atctacgcca ccggcgtgcc gcgcctgcgc ctgatcccgg
     6541 ccggcgactc gcgcgaggac ggcggcgagt atttctcctc gttccgcatg caggcgctga
     6601 tgcagtcgct gcgcagccgc tacgcggatc gctacctgtt cctcgacggc cccgcggtca
     6661 agggctcgcc cgacgcgcgc atcctctccg agctggccga cttcgtgctg gtggtcaccg
     6721 gctatggcca cgacacgccg gccgcgatca cccaggccgt ggcccacttc ccgccggaaa
     6781 agttcgccgg cgtggtgttc aaccgagtgc cgtgaggcag cgccgccatc cgcctgcggc
     6841 gcctcgcgcc gccccatcaa tggctcatcc accgggaggg atgaacccat gtcatccaac
     6901 aaactgagct gcgccgtggc gcttgccctg ctcagcagca gtgcgcacgc ggccaccagc
     6961 caattcgatt acgacatcta caccggcatc ctgcacagcg acaacatcac gctggtcaac
     7021 cagcagccga tcagccagag cgtgttgata ccgggcgtgg atttcacctg gaaccagcaa
     7081 ggcgcggacc tcagggccaa tgcggtcggc aacatcgagt accgcgatta cctcggcagc
     7141 cggttcacca accagaccgc cgtccagtta accagccagg cgctgtggac cctctcgcca
     7201 cagcgcctcg acctctcgat ccaggactat gccggcatcg agccgctgga ttcgctggcc
     7261 aacgatcgcc cgagcaaccg ccagcagacc aacgtgttca tcgtcggccc ggtgttccat
     7321 ttccggctcg gcaccgccct gcatgggcag gccgagctgc gctatctcaa cagctacgcc
     7381 gagaagaccg acaacttcaa ttccaaccgc gtgcaaggcg cgctgcgcgt gatccgggac
     7441 atcagcccca ccagccagtt ctcgctgaac ctcgatgggc agaaggtcga cctgtacgag
     7501 gacaccatcg acccgaacta cagccgctac gaagcgtacg gccactacgt cagcaagctg
     7561 accagcctcg atctcgacct cgag
//
LOCUS       DASSVL010000293         2163 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_925203, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000293 DASSVL010000000
VERSION     DASSVL010000293.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2163)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2163)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2163
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_925203"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..573
                     /locus_tag="VFM52_05090"
     CDS             <1..573
                     /locus_tag="VFM52_05090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017462721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isoaspartyl peptidase/L-asparaginase"
                     /protein_id="HET8764575.1"
                     /translation="QGIALVEPEYFHTEIRWRQLQDALRQAERGEQVDHFGTVGAVAL
                     DAAGHLAAATSTGGMTGKRWGRVGDSPLIGAGTYANAACAMSGTGWGEFYIRTVAAHA
                     ICMQVSQMRVPIQRAAAVVVNQQIPALGGNGGAIALDAHGNIAIPFNTDGMYRGWIGA
                     DGVPHVAIYGDEDDGTAEPPAPAGGDTTQR"
     gene            complement(619..1092)
                     /locus_tag="VFM52_05095"
     CDS             complement(619..1092)
                     /locus_tag="VFM52_05095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008212221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8764576.1"
                     /translation="MIRRCLFLALLALSLPAFAGGPTVEPLSAAGVPALTKAPAHGAR
                     IVSIWALDCAYCEANMQVAAQAARAAPGQVELVTVATDRIALKAQIAARLAAAHMDAF
                     PARAYTEASPERINFLIDPDWGGETPRTIVIHADGRRAAASGALTAAKLQKLLAN"
     gene            complement(1089..>2163)
                     /locus_tag="VFM52_05100"
     CDS             complement(1089..>2163)
                     /locus_tag="VFM52_05100"
                     /EC_number="3.2.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007079975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="sialidase family protein"
                     /protein_id="HET8764577.1"
                     /translation="GASAAFDAHGQLWLASAHGEHVVLQHSDDLGRTLSPAVVVNPTP
                     EAIYATGENRPKIAFGPAGQVYVQWTEKPAAGWVGDVRFARSTDGGKTFSAPITVNHD
                     TTPATRGFDSLAVAGNGDIISAWIDGRDSAAAKAVGKPYAGFAFYYARSTDGGRGFAP
                     GRKLMDHSCECCRTTLARAPDGRIATFFRGIYGDNIRDHAYAVLPAGNAPAHAERATF
                     NDWQVAACPDQGPGLAIDTHGVRHAVWYEAKGGPTIWYGQLDPGHPPRHALKIGAGGA
                     SHADVAVHASTVWLAWNQVNAQGYALMLRRSDDGGAHFAAPRAIATSTHAVGSPQLLL
                     RGGRAYVAWNTAEGFKLVATEAP"
BASE COUNT          292 a          729 c          829 g          313 t
ORIGIN      
        1 cagggtatcg ccctggtcga acccgaatac tttcataccg agattcgctg gcgccagttg
       61 caggatgcgc tgcgccaggc cgaacgcggc gagcaggtgg atcatttcgg tacggtcggt
      121 gcggtggcgc tcgatgccgc cggccatctg gcggcggcga cttcgaccgg cggcatgacc
      181 ggcaagcgct ggggccgcgt cggcgattcg ccgctgattg gcgccggcac ttatgccaac
      241 gccgcgtgcg cgatgagcgg caccggctgg ggcgagttct acatccgcac cgtggccgcg
      301 cacgcgatct gcatgcaggt gagccagatg cgggtgccga tccagcgcgc ggcggcggtg
      361 gtggtcaacc agcagattcc cgcgctgggc ggcaacggcg gcgcgatcgc gctcgacgcg
      421 cacggcaaca tcgcgatccc gttcaacacc gacggcatgt accgcggctg gatcggcgcc
      481 gacggcgtgc cgcacgtggc gatctacggc gacgaggacg acggcaccgc cgagccgccg
      541 gcgccggcgg gtggcgacac gacgcaacgg tgatgccgcc aggtcgcgcg gcgaccgggc
      601 atggcgtgct gctgcagatc agttcgccag cagcttttgc agcttggccg cggtcagcgc
      661 accgctggcg gcggcgcgcc ggccatcggc gtggatgacg atggtgcgcg gtgtctcgcc
      721 gccccagtcc gggtcgatca aaaagttgat gcgctcgggc gatgcctcgg tgtaggcgcg
      781 ggcggggaac gcgtccatgt gtgcggctgc gaggcgtgcc gcgatctgcg cctttagcgc
      841 gatgcggtcg gtggcgacgg tgaccagttc gacctggccc ggcgcagcgc gcgcggcctg
      901 cgcggcgacc tgcatgttcg cctcgcagta ggcgcaatcc agcgcccaga tcgacacgat
      961 gcgcgcgccg tgcgccggcg ccttggtcag tgcaggaacc ccggcggcgg acagtggctc
     1021 gacggtcggg ccgccagcaa aggcgggaag gctcagcgcg agcaatgcga gaaacaggca
     1081 acggcggatc acggcgcctc cgtggcgacg agcttgaagc cctcggcggt gttccacgcg
     1141 acgtaggcgc ggccaccgcg cagcaggagt tgcggcgaac cgacggcgtg agtcgaggtg
     1201 gcgatggcgc gcggcgcggc gaagtgcgca ccgccgtcgt ccgagcggcg cagcatcagc
     1261 gcgtagccct gcgcgttcac ctggttccac gcgagccaca cggtgctggc gtgcacggcg
     1321 acgtcggcgt ggctggcgcc gccggcgccg atcttcagcg cgtgccgcgg cgggtggccg
     1381 gggtcgagct ggccgtacca gatggtcggc ccgcctttcg cctcgtacca caccgcgtgg
     1441 cgcacgccgt gcgtgtcgat cgccaggccc ggcccctggt cggggcaggc ggcgacctgc
     1501 caatcgttga acgtggcgcg ctcggcgtgc gccggcgcgt tgccggcggg cagcacggcg
     1561 taggcgtggt cgcggatgtt gtcgccgtag atgccgcgga agaacgtggc gatccggcca
     1621 tccggcgcac gggccagcgt ggtgcggcag cattcgcaac tgtggtccat cagcttgcgc
     1681 ccgggcgcga agccgcggcc gccgtcggtc gagcgcgcgt agtagaacgc gaacccggcg
     1741 tacggcttgc ccacggcctt ggccgcggcg ctgtcgcggc cgtcgatcca ggccgagatg
     1801 atgtcgccgt tgccggcgac ggcgagcgag tcgaagccgc gcgtggcggg cgtggtgtcg
     1861 tggttgacgg tgatcggcgc ggagaacgtc ttgccgccgt cggtcgagcg cgcaaatcgc
     1921 acgtcgccga cccagcccgc ggcgggcttt tcggtccatt gcacgtagac ctggccggcc
     1981 ggaccgaagg cgatcttcgg ccggttttcg ccggtggcgt agatcgcctc cggcgtcggg
     2041 ttcaccacga ccgccgggct cagcgtcctg ccgaggtcgt ccgaatgctg cagcaccacg
     2101 tgctcgccgt gcgcgctggc cagccacagt tggccgtgcg cgtcgaacgc cgcgctggcg
     2161 ccg
//
LOCUS       DASSVL010000294         3298 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_63176, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000294 DASSVL010000000
VERSION     DASSVL010000294.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3298)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3298)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3298
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_63176"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2218
                     /locus_tag="VFM52_05105"
     CDS             <1..2218
                     /locus_tag="VFM52_05105"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HET8764578.1"
                     /translation="LLAAHDGSIYVAGVGTGVFRVDPQTFEIQPLSPPGTDEGAREIV
                     QLREAADGSIWIATHAGIARLAAGAHAFAFVPGIARSDIHAFAFGPDGDLWIARAASL
                     QHYRIGHDGAELLATIGAAQGWPDSNVLGLQVGEQGRVFALGTRNLLVFDPRNRQLHA
                     FATAEGLATTDFTGDALLATGHGQLFAGSLAGVIGIRTRELPWRLATPKVALESVNVR
                     RNDKLVDLDPGKPIDLDWRDRELTVTAQVLSFVDPARNQYRFRLQGFDPGWIETGNRN
                     VREFSVLEPGNYRLLVSGRTGDGPWSAPLAAFSLRVSAAPWNTSWAWAAYVVAIAALL
                     VWAAWALRRRLQQQHRLALSEERQHIAEQANAAKSRFLANMAHEIRTPLTGVLGMTEL
                     LLKTQLNDRQHQYADAIRRSGALLLRHVNDALDVARIEAGRLELNPAPFDPAAILREI
                     ANADAGLAAQKNLSIDVVIAPDAPRAVRGDALRVQQILFNLTHNALKFTTHGGITLKL
                     DRDGDGIAYHVIDNGPGMTSEECARIFQRFEQADHGRLQPGSGLGLAISRELVNLMGG
                     RIGVQSVPGRGSTFSVQLPLAGVSLPVTAREPAQHPEPAPEGSSAASPDAAPRVLLVE
                     DDPVAGQAIAGLIETFGYAVTLAPQALAALSEIDADGGFDLVVCDFDLPGMDGCELTR
                     ILRQRGVATPIVALTASAHGDEEQRAIAAGMNAFLRKPVLPDDLREALERAMRVPA"
     gene            complement(2382..>3298)
                     /locus_tag="VFM52_05110"
     CDS             complement(2382..>3298)
                     /locus_tag="VFM52_05110"
                     /EC_number="3.4.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014403780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070006 - metalloaminopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0019538 - protein metabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="leucyl aminopeptidase"
                     /protein_id="HET8764579.1"
                     /translation="LCTPAHIAAQARTIADGHADSVTLEVLERDDMRKLDMGALLAVS
                     SGSATLPKLIVLQYQGAGDAKPYALVGKGVTFDTGGMNLKPTGSMEEMKYDMCGAAGV
                     LGAFLSTVELKLPINLVCVVPSVENMPDGGSYRPADVLHTHAGITVEVLNTDAEGRLI
                     LCDALSYTCKRFAPRALVDAATLTGACVIALGAHASGLFSADDALASELLAAGDASLD
                     RAWRMPLWDDYRNQLESAFADIANVGGKSAGAVTAALFLSRFTEGTRWAHLDVAGTAW
                     VPGRKGYATGRPVPLLAQWLIDSAHASE"
BASE COUNT          529 a         1152 c         1121 g          496 t
ORIGIN      
        1 gctgctcgcc gcgcacgacg gcagcattta cgtggccggt gtcgggaccg gcgtgttccg
       61 cgtcgacccg cagaccttcg agatccagcc gctctcgcca ccgggcaccg acgagggcgc
      121 ccgcgaaatc gtgcaactgc gcgaggccgc ggacggttcg atctggatcg cgacccacgc
      181 cggcatcgcg cgcctcgcag ccggtgcgca cgcgtttgcg ttcgtgccgg gcatcgcacg
      241 cagcgacatc catgccttcg cgttcggacc cgatggcgat ttgtggatcg cgcgcgcggc
      301 cagcctgcag cactatcgca tcgggcacga tggggcagag cttctcgcca ccatcggcgc
      361 cgcacagggc tggcccgaca gcaacgtact gggcctgcag gtcggcgagc aggggcgcgt
      421 gttcgcgctc ggcacccgca acctgctggt gttcgatcca cgcaaccggc aactgcacgc
      481 gttcgccacg gcggaaggat tggcgaccac cgacttcacg ggcgacgcgt tgctcgctac
      541 cggccacggg caactcttcg ccggcagcct cgcgggcgtg atcggcatcc gcacccgcga
      601 gctgccgtgg cggctcgcca cgccgaaggt cgcgctggaa tcggtgaacg tgcgccgcaa
      661 cgacaagctg gtggatctcg atcccggcaa accgatcgac ctcgactggc gcgaccgcga
      721 actcaccgtg accgcgcagg tgctttcgtt cgtcgatccg gcgcgcaacc aataccggtt
      781 ccgcctgcag gggttcgatc ccggctggat cgaaaccggc aaccgcaacg tgcgcgaatt
      841 ctcggtgctg gaaccgggca actatcgcct gctggtgagt ggccgcaccg gggacggccc
      901 gtggagcgcg ccactggccg cgttttcgct gcgcgtctcg gcggcgccgt ggaacacgtc
      961 gtgggcatgg gcggcgtacg tggtggcgat tgccgccttg ctggtgtggg cggcgtgggc
     1021 attgcggcgt cggctgcagc agcagcaccg gctcgcgctc agcgaggaac gccagcacat
     1081 cgccgaacag gccaacgcgg cgaagtcgcg cttcctcgcc aacatggcgc acgaaatccg
     1141 cacgccgctt accggcgtgc tgggcatgac cgagttgctg ctgaagacgc agctcaacga
     1201 ccgccagcat caatacgcgg acgcaatccg gcgctccggc gcactgctgt tgcggcacgt
     1261 caacgatgcg ctcgacgtgg cacgcatcga ggccggccgg ctggaactca accccgcgcc
     1321 gttcgatccc gcggcgatcc tgcgcgaaat cgcgaatgcc gacgcgggtc tggcggcgca
     1381 gaaaaacctg tccatcgacg tggtgatcgc gcccgacgcg ccgcgcgcgg tgcgcggcga
     1441 tgcgctgcgc gtgcagcaga tcctgttcaa cctcacccac aacgcgttga agttcaccac
     1501 ccacggcggc atcacgctga agctggaccg cgatggcgac ggcatcgcct atcacgtgat
     1561 cgacaacggc cccggcatga cctccgagga atgcgcacgg atcttccagc gtttcgaaca
     1621 ggccgaccat ggacggctgc agcccggcag cggactcggg ctcgcgatca gccgcgaact
     1681 ggtgaacctg atgggcggac gcatcggcgt gcagtcggtg ccgggacgcg gcagcacctt
     1741 cagcgtccag cttccgctcg cgggggtgtc gctgccggtg accgcaaggg agcccgcgca
     1801 acatcccgaa ccggcgccgg aaggctcatc ggcggcatcg ccggacgccg cgccgcgcgt
     1861 gctgctggtc gaggacgatc cggtcgccgg acaagccatc gcaggcttga tcgagacctt
     1921 cggttacgcg gtgaccctgg cgccgcaggc gctggcggcg ctttcggaga tcgacgccga
     1981 cggtggcttc gacctggtgg tgtgcgattt cgacctgccc ggcatggacg gctgcgagct
     2041 gacgcggata ttgcgacaac gcggtgtcgc cacgcccatc gtcgcgctca ccgccagcgc
     2101 gcacggcgac gaggagcaac gcgcaatcgc cgccggcatg aatgcgttcc tgcgcaaacc
     2161 ggtgttgccc gacgatttgc gcgaagccct ggaacgcgcg atgcgcgtcc cggcgtgagt
     2221 cggctgtttc tcgcgcgtca ccaaccccct tgaaccgatt ccggattcgg gcctgcggcc
     2281 cgctccggaa tgaccagaat aggtagggcg ggaggagcgc agcgcatccc gccgaacgac
     2341 gtcacggcga cggattgccg ctccggccca cgcgggctgc cctactccga ggcgtgggcg
     2401 gaatcgatca gccactgcgc cagcagcggc accggccggc ccgtggcata acccttgcgg
     2461 cccggcaccc acgcggtacc cgccacgtcg agatgcgccc agcgcgtgcc ctcggtgaag
     2521 cgcgacagga acagtgcggc agtgacggcg ccggcgctct tgccgccgac gttggcgatg
     2581 tcggcgaagg ccgattcgag ctggttgcgg tagtcgtccc acagcggcat gcgccacgcg
     2641 cgatcgaggg aggcgtcgcc tgcagccagc agttcactgg ccagtgcgtc atcggcgctg
     2701 aacaggccgg aggcatgcgc gccgagcgcg atcacgcagg cgccggtgag cgttgcggca
     2761 tcgaccagcg cccgcggcgc gaagcgcttg caggtgtacg acagcgcatc gcagaggatc
     2821 aaccggccct cggcgtcggt gttcaacacc tccaccgtga tgccggcgtg ggtgtgcagc
     2881 acgtccgcgg gacggtagct gccgccgtcc ggcatgttct cgaccgacgg caccacgcac
     2941 accagattga tcgggagctt caattccacc gtcgacagga acgcgcccag cacgccggcc
     3001 gcgccgcaca tgtcgtactt catttcctcc atcgaacccg tcggcttgag gttcatgccg
     3061 ccggtgtcga aggtgacgcc cttgccgacc agcgcgtacg gcttggcgtc gcccgcgccc
     3121 tgatattgca gcacgatcaa cttgggcagt gtcgcggaac ccgacgacac cgcgagcagc
     3181 gcgcccatgt cgagctttcg catgtcgtcg cgttccagca cttccagcgt gaccgaatcg
     3241 gcgtgtccgt cggcgatggt cctggcctgc gccgcgatgt gggcgggcgt gcacaggt
//
LOCUS       DASSVL010000295         3122 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1164922,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000295 DASSVL010000000
VERSION     DASSVL010000295.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3122)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3122)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3122
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1164922"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            260..2365
                     /gene="pnp"
                     /locus_tag="VFM52_05115"
     CDS             260..2365
                     /gene="pnp"
                     /locus_tag="VFM52_05115"
                     /EC_number="2.7.7.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008435592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004654 - polyribonucleotide
                     nucleotidyltransferase activity [Evidence IEA];
                     GO_process: GO:0006402 - mRNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyribonucleotide nucleotidyltransferase"
                     /protein_id="HET8764580.1"
                     /translation="MAKVTKSFQYGNHEVTLETGEIARQASGAVMVSMGGTVVLVTAV
                     AAAKAKEGQDFFPLTVDYVEKFYSAGRIPGGFFKREGRPTEKETLTSRLIDRPVRPLF
                     PEGFKNEVQVIAQVVSLNPEVDGDIVALLGASAALSLAGIPFKGPIGAARVGYADGKY
                     LLNPTATELKTSQLDLVVAGTAGAVLMVESEAQLLSEDVMLGAVMFGHQQMQTAIRAI
                     AELATEAGKPSWDWQAPARNESLAAAVKGAVGDQLAAAFQVRDKLERRDAISAIKADV
                     LAGLKAQAEENGWSTAAMAKEFEELEYHTMRDSVLKTKVRIDGRQLDDVRAITARVGV
                     LPRTHGSALFTRGETQALVVVTLGTTRDAQIIDAPEGESKDPFLFHYNFPPFSVGEAG
                     RFGAPKRREIGHGRLAKRGVQAVKPSIEEFPYVLRVVSEITESNGSSSMATVCGSSLA
                     MMDAGVPLKAPVAGIAMGLVKEGNDFVVLSDILGDEDHLGDMDFKGAGSAEGISALQM
                     DIKIDGITEEIMQIALAQAKRGRLHILGEMAKAINTPRTEMSEYAPRLLTIKIHPDKI
                     REVIGKGGATIRSITEETGATIDINDDGTVIIASVNRSAGEAAKKRIEQIVSDVEPGK
                     VYEGKVVKLMDFGAFVTIMPGKDGLVHISQISNERVEKVSDKLKEGQTVKVKVLEVDK
                     QGRIRLSMKAVTEEDAKSV"
     gene            2451..>3122
                     /locus_tag="VFM52_05120"
     CDS             2451..>3122
                     /locus_tag="VFM52_05120"
                     /inference="COORDINATES: protein motif:HMM:NF021246.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="poly(R)-hydroxyalkanoic acid synthase subunit
                     PhaE"
                     /protein_id="HET8764581.1"
                     /translation="MRQRPRGSAMSGQTGDFVKDWQVLAQQSWDAWQRQLQRPPAPAQ
                     PVGNEALDRTLAGLKGCFDWMQGIAAAGASQPGADWQSLLSAWAGAGNQPFTQAFAGI
                     DSAAAQGFVEQWQTWLRSAQLGGFPAANAASGPVPAFGLQREDLMQQQELVAAIQAAI
                     QANARYQDLIQRANAKGLELLQGRLVDRDAASPPIDSLKALYDLWVDAAEDAYAEIAL
                     SDEFRT"
BASE COUNT          559 a         1004 c         1078 g          481 t
ORIGIN      
        1 aggatcgcga cctcggccgt taccagggtc tgatcgagcg cctcggcctc cgtcgttgat
       61 tcctgcgttc gaccacgaac gcaggcgggg cgtggccatg cgtggctgcg ggccccggcc
      121 ctgcgtgcgt cggcggacgt aaagatcagg cagcggccgt tcgtggccgc actcattcag
      181 ccaccgcgtc cgttcccgga cgcgaagatc aggaggcggt cgcccgcggc cgcttctctc
      241 aaagaggcag gaaatcaaca tggcgaaagt aaccaagtca ttccagtacg gtaatcacga
      301 agtcacgctg gagacgggcg aaatcgcccg ccaggcttcc ggcgcggtca tggtcagcat
      361 gggcggcacc gtcgtgctgg tcaccgcggt ggccgcggcc aaggcgaagg aagggcagga
      421 cttcttcccg ctcaccgtcg actacgtgga aaagttctac tccgccggcc gcatccccgg
      481 tggcttcttc aagcgcgaag gccggccgac cgagaaggag acgctcacct cgcgcctgat
      541 cgatcgtccg gtgcgcccgc tgttcccgga aggcttcaag aacgaagtgc aggtcatcgc
      601 gcaggtcgtc tcgctgaacc cggaagtcga tggtgacatc gtggccttgc tcggcgcctc
      661 cgccgcgttg agccttgccg gcatcccgtt caagggcccg attggcgccg cccgcgtcgg
      721 ttacgccgat ggcaagtacc tgctgaaccc gacggctacc gaactgaaga cttcccagct
      781 ggacctggtc gtcgccggta ctgccggtgc ggtgctgatg gtggaatccg aggcgcagct
      841 gctgtccgag gacgtgatgc tcggtgcagt gatgttcggc caccagcaga tgcagaccgc
      901 catccgcgcg atcgccgaac tggccaccga ggccggcaag ccgtcgtggg actggcaggc
      961 accggcgcgc aacgagtcgc tggccgctgc cgtcaagggc gcggtcggcg accagctggc
     1021 cgccgcgttc caggtgcgcg acaagctcga gcgtcgcgac gcgatctccg cgatcaaggc
     1081 cgacgtgctg gccgggctca aggcacaggc cgaagaaaac ggctggtcca ccgccgcgat
     1141 ggccaaggaa ttcgaggagc tcgaatacca caccatgcgc gacagcgtgc tgaagaccaa
     1201 ggtgcgcatc gacggccgcc agctcgacga cgtgcgtgcg atcaccgccc gtgtcggcgt
     1261 gctgccgcgg acgcatggtt cggcgctgtt cacccgcggc gagacgcagg cgctggtcgt
     1321 ggtcacgctg ggcaccacgc gtgacgcgca gatcatcgac gcgccggaag gcgagtcgaa
     1381 ggacccgttc ctgttccact acaacttccc gccgttctcg gtgggcgagg ccggccgctt
     1441 cggcgcgccc aagcgtcgcg agatcggcca cggccgcctc gccaagcgcg gtgtgcaggc
     1501 ggtcaagccc tcgatcgagg aattcccgta cgtgctgcgc gtggtctcgg agatcaccga
     1561 gtcgaacggc tcatcgtcga tggcgacggt gtgcggttcc tcgctggcga tgatggacgc
     1621 cggcgtgccg ctgaaggcgc cggtggccgg catcgcgatg ggcctggtca aggaaggcaa
     1681 cgacttcgtc gtgctctccg acatcctggg cgacgaggat cacctcggcg acatggactt
     1741 caagggggcc ggcagtgccg agggcatcag cgccctgcag atggacatca agatcgacgg
     1801 catcaccgag gagatcatgc agatcgcgct ggcgcaggcc aagcgcggcc gcctgcatat
     1861 cctcggtgag atggccaagg ccatcaacac gccgcgcacc gagatgagcg agtacgcccc
     1921 gcgcctgctc accatcaaga tccacccgga caagatccgc gaggtgatcg gcaagggcgg
     1981 cgccaccatc cgctcgatca ccgaggaaac cggcgccacg atcgacatca acgacgacgg
     2041 cacggtgatc atcgcttcgg tcaaccgcag cgccggcgaa gcggcgaaga agcgcatcga
     2101 gcagatcgtg tccgacgtcg aaccgggcaa ggtctacgag ggcaaggtcg tcaagctgat
     2161 ggacttcggc gcattcgtga cgatcatgcc gggcaaggac ggcctggtgc acatctcgca
     2221 gatttccaac gagcgcgtgg agaaggtttc cgacaagctc aaggaaggcc agaccgtcaa
     2281 ggtcaaggtg ctggaagtgg acaagcaggg ccgcatccgc ctgtcgatga aggccgtgac
     2341 cgaggaagac gccaagagcg tttgaccggt ttggcggtaa cgctcgttgc gaggcccggc
     2401 catgccgggc ctcgcgcgtt tccgggtcgt gcaccgtgtg gtttgctagg atgcgacaac
     2461 ggccacgagg aagcgcgatg agcggacaga caggcgattt cgtcaaggat tggcaggtgc
     2521 ttgcccagca atcgtgggat gcgtggcagc ggcaattgca gcgcccgccg gcgccggccc
     2581 agcccgtcgg caacgaggcg ctcgaccgca cgctggctgg gctcaagggg tgtttcgact
     2641 ggatgcaggg catcgccgcg gcgggtgcaa gccagcccgg cgcggattgg cagagcctgc
     2701 tgagcgcctg ggccggcgcc ggcaaccagc cgttcaccca ggcgtttgcc ggcatcgaca
     2761 gtgccgccgc gcaggggttc gtcgaacagt ggcagacgtg gctgcgttcg gcgcagcttg
     2821 gtggcttccc ggcggcgaat gccgcctctg gcccggtccc ggcgttcggt ctgcaacgcg
     2881 aagacctgat gcagcagcag gagctggtcg ccgcgatcca ggccgccatc caggccaatg
     2941 cgcgctacca ggacctgatc cagcgcgcca atgcgaaggg cctggagttg ctgcaagggc
     3001 gcctggtcga ccgtgatgcg gcgagcccac cgattgattc gctgaaggcg ctgtacgact
     3061 tgtgggtgga tgccgccgag gatgcctatg cggagatcgc cttgtccgac gagttccgta
     3121 cc
//
LOCUS       DASSVL010000296         3024 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_133899, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000296 DASSVL010000000
VERSION     DASSVL010000296.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3024)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3024)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3024
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_133899"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(290..1516)
                     /locus_tag="VFM52_05125"
     CDS             complement(290..1516)
                     /locus_tag="VFM52_05125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007810510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HET8764582.1"
                     /translation="MALFGFSSGLPFLLVAGTLAYWLKENGIRLGDITMIASAGMTYA
                     FKFVWAPLLDHVRLPGFARLGQRRGWLLAAQLALTVGLLAMAWFTPRELVPFILATLV
                     VAFFGATQDIAIDAYRIEIAPIEAQGALVATYSLGYRIGLLVAGAVALIAADHLPWRV
                     VYVGMAVAMLVPIATTLVAREPDVVHATSLRWRAAMREGVLDPFADFFRRYGWALAAV
                     TLVFLLLFKLPEQATVGGIMSPFYRDMGFSKTEIGTITKVYGIWIGIVGVFIGGAMVA
                     RWGAWRPLGLTIALCGPTNLLYLLLIAHPGNLVMLTLVISGENLALGMLGPPTVAFLS
                     SLVNQRHTATQYALLSSLVNLPGKVLGFFAGDIATATGYGGYFVITVLAVVPSMLLFA
                     MLWRYFRGAERARMTS"
     gene            complement(1594..2361)
                     /locus_tag="VFM52_05130"
     CDS             complement(1594..2361)
                     /locus_tag="VFM52_05130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006448970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease III"
                     /protein_id="HET8764583.1"
                     /translation="MRIITLNANGIRSAASKGVYEWLAKQRADVVCVQEVKAQTDQLS
                     DPMYHPHGQHAYYRHATTKKGYSGVAVYARREPDEVRTALGWEAFDEEGRYLEARFGN
                     LSVVSLYVPSGSSGEERQAFKFKAMDWLAPILGEWLASGRDYVLCGDWNIVRSEKDIR
                     NWRSNQKNSGCLPEERAWLNGLVDAGWVDSYRRLHPDGEDYTWWSNRGQARANNVGWR
                     IDYQLVTPALAAKLKRCAIYRDERFSDHAPYIADYAD"
     gene            2399..2890
                     /locus_tag="VFM52_05135"
     CDS             2399..2890
                     /locus_tag="VFM52_05135"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008213576.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HET8764584.1"
                     /translation="MPTPAVRVAPVTPELRDAVLRLRPYPDQTVFVSPPALTLPDAER
                     NAGSQPMAILAGDSVVGYYRIERSARSLTGHAADRQALGLRSFQIGREYQRQGFGTAA
                     LGALLADLVVRRPRARCLLLTVSPRNLAALKVYLRAGFVDRGALYHGARAEPEHLLWR
                     ALP"
     gene            2901..>3024
                     /locus_tag="VFM52_05140"
     CDS             2901..>3024
                     /locus_tag="VFM52_05140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007514389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="orotate phosphoribosyltransferase"
                     /protein_id="HET8764585.1"
                     /translation="MHDYQRDFIDLTLERGVLRFGDFTLKSGRQSPYFFNLGRID"
BASE COUNT          496 a         1090 c          997 g          441 t
ORIGIN      
        1 accggttttc gctgcatgag gacagcaggg acaggcccag cccgcgccgc agcgcgagca
       61 gcatcacctc gttggttgaa cactggcgtt cgttggccac gagccgaatg cgctcggcca
      121 actggctgtc gacgtattgc acgacgattt ccggcatggg ggtgccccgc gcggtgaggt
      181 ggccctgtac cgggcatgct gccacgcggc ctggtgcgct gggccggcga tccctgcaaa
      241 gcgtggcgcg gttcgcatca gcagcgtgaa ccaggccacg aaagtcgcgt caggatgtca
      301 tccgcgcccg ctcggcgccg cggaaatacc gccacagcat cgcgaacaac agcatcgagg
      361 gcaccaccgc cagcacggtg atcacgaagt acccgccata gccggtggcc gtcgcgatgt
      421 cgccggcgaa gaagccgagc accttgcccg gcaggttgac cagcgagctg agcagtgcgt
      481 actgggtcgc cgtgtgtcgc tggttcacca gcgacgacag gaacgccacg gtcggtggcc
      541 cgagcatacc gagcgcgagg ttctcgccgg aaatcaccag cgtcagcatc accaggttgc
      601 ccgggtgcgc gatcagcagc aggtacagga gattggtcgg gccgcacagc gcgatcgtca
      661 gcccgagcgg ccgccacgcg ccccagcgcg ccaccatcgc accgccgatg aacacgccga
      721 cgatgccgat ccagatgcca tagaccttgg tgatggtgcc gatctcggtc ttggaaaaac
      781 ccatgtcgcg gtagaacggg ctcatgatgc cgccgaccgt cgcctgctcg ggcagcttga
      841 acagcagcag gaacaccagc gtgacggcgg ccagcgccca gccgtagcgg cggaagaaat
      901 ccgcgaacgg gtcgagcacg ccctcgcgca tcgccgcgcg ccagcgcagc gacgtcgcat
      961 gcaccacgtc cggctcgcgc gccaccagcg tggtcgcgat cggcaccagc atcgccaccg
     1021 ccatgccgac gtagaccacg cgccacggca ggtggtcggc ggcgatcagc gcgaccgcgc
     1081 cggccaccag caggccgatg cggtagccga gcgaatacgt cgcgaccagg gcgccctgcg
     1141 cctcgatcgg cgcgatctcg atgcgatagg cgtcgatcgc gatgtcctgc gtggcaccga
     1201 agaaggcgac gaccagggtg gcaaggatga acggcacgag ttcgcgcggc gtgaaccacg
     1261 ccatcgccag caggccgacg gtcagcgcca gctgcgcggc gagcagccag ccgcgtcgct
     1321 ggccgagccg cgcaaacccc ggcaggcgca cgtggtcgag cagcggcgcc cacacgaact
     1381 tgaacgcgta ggtcatgccg gcgctggcga tcatcgtgat gtcgccgagg cggatgccgt
     1441 tttccttgag ccagtacgcg agcgtgccgg cgaccagcag gaacggcagg ccggaggaaa
     1501 acccgaacag cgccatcgtc cccgcggcgg gctgcgcgaa cgcacgccat accgagggct
     1561 tcgccggccg tgcggcggcg tccgtcgcca tgctcagtcg gcgtagtcgg cgatgtaggg
     1621 cgcgtgatcg gaaaaccgct catcgcggta gatcgcgcaa cgcttgagct tcgccgccag
     1681 cgccggggtg accagctggt agtcgatgcg ccagccgacg ttgttcgcgc gcgcctggcc
     1741 gcggttcgac caccacgtgt agtcctcgcc atcgggatgc aggcgccggt aactgtcgac
     1801 ccagcctgcg tcgaccaggc cgttgagcca cgcgcgctcc tcgggcaggc agccggagtt
     1861 cttctggttc gacctccagt tcctgatgtc cttctcgctg cgcacgatgt tccagtcgcc
     1921 gcacagcacg tagtcgcggc cactggccag ccactcgccg aggatcggcg cgagccagtc
     1981 catcgccttg aacttgaacg cctggcgctc ctcgcccgac gagccggacg gcacgtagag
     2041 cgacaccacg ctgaggttgc cgaaacgcgc ctcgagatag cgcccctcct cgtcgaacgc
     2101 ttcccagccc agcgccgtgc gcacctcgtc cggctcgcgc cgcgcgtaca ccgcgacgcc
     2161 cgaatagccc ttcttcgtcg tcgcgtggcg gtaataggca tgctgcccgt gcgggtggta
     2221 catcgggtcg ctgagctggt cggtctgcgc cttgacctcc tgcacgcaga ccacgtcggc
     2281 gcgctgcttc gccagccact cgtacacgcc cttgctggcg gccgaacgga tgccgttcgc
     2341 gttcaaggtg atgatgcgca tgcgtgcctc ctcgggcgaa gcgggcatga tagcaaccat
     2401 gcctacgcct gccgtccgcg ttgcgcccgt cacgcccgaa ctgcgcgacg cggtgctgcg
     2461 cctgcgcccg taccccgacc agaccgtgtt cgtgagcccg ccggcgctca cgctgccgga
     2521 cgccgaacgc aacgccggca gccagccgat ggccatcctc gccggcgatt cggtggtcgg
     2581 ctactaccgc atcgagcgca gcgcgcgcag cctgaccggg catgccgccg accgccaggc
     2641 gctcggcctg cgctcgttcc agatcggccg cgaataccag cgccagggtt tcggcacggc
     2701 ggcgctgggc gccctgctcg ccgacctcgt cgtgcgccgg ccgcgtgcgc ggtgcctgct
     2761 gctgaccgtc agcccgcgca accttgccgc gctcaaggtc tacctgcgcg ccggcttcgt
     2821 cgaccggggt gcgctgtacc atggcgcgcg cgccgaaccc gagcacctgc tgtggcgcgc
     2881 cttgccctga cgagaccgcc atgcacgact accagcgcga cttcatcgac ctcaccctcg
     2941 aacgcggcgt gctgcgattt ggcgatttca ccctgaagtc cggccgccag agcccgtatt
     3001 tcttcaacct cgggcggatc gaca
//
LOCUS       DASSVL010000297         2632 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_981588, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000297 DASSVL010000000
VERSION     DASSVL010000297.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2632)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2632)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2632
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_981588"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1973
                     /locus_tag="VFM52_05145"
     CDS             <1..1973
                     /locus_tag="VFM52_05145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008212482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015930 - glutamate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0016638 - oxidoreductase activity, acting
                     on the CH-NH2 group of donors [Evidence IEA];
                     GO_process: GO:0006537 - glutamate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="glutamate synthase-related protein"
                     /protein_id="HET8764586.1"
                     /translation="RIGGKSNTGEGGEDPARYRREMRGEAVKEGETLAEILGKQNIVR
                     DLTLKAGDSLRSRIKQVASGRFGVTAAYLVSADQIQIKIAQGAKPGEGGQLPGHKVST
                     YIAKLRHSVPGVGLISPPPHHDIYSIEDLAQLIHDLKSCNPRADVSVKLVSEVGVGTV
                     AAGVAKAKADHIVIAGHDGGTGASPWSSIRHAGSAWELGLAETQQTLVLNRLRGRVCV
                     QADGQMKTGRDVVIAALLGADEFGFATAPLVTQGCIQMRKGQLNTCPTGIATQDPELR
                     RRFNGKPEYVVNYFFFVAEEVRQLMAKLGFRQFDDMIGRADLLDTRAGIEHWKARGLD
                     FSRVFHRPQVPEGTAWRHVEYQDHELGNAFDHVLIDKAKAALEHGEQASFIVDIRNAH
                     RSVGAMLSGVLARLHGQAGLPDDTIHVQLSGTAGQSFGAFLAHGITFDLVGQANDYVG
                     KGLSGGRIIVRSPNDFHGFGPDHIIAGNTLLYGATSGEAYFNGVAGERFAVRNSGAIA
                     VVEGVGDHGCEYMTGGTVVVLGETGRNFAAGMSGGVAYVYDPHNQFEARANLAMVALE
                     PVLSGVEQGVRVDRAQWHRVGGSLAQPETDEAILRRLLEAHFRYTGSFRAKEILTDWP
                     TMRGRFVKVMPTDYRRALIEVATARAAATATV"
     gene            1987..>2632
                     /locus_tag="VFM52_05150"
     CDS             1987..>2632
                     /locus_tag="VFM52_05150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008212480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HET8764587.1"
                     /translation="MGKITGFLEIPRQPEPTRPVAERKQDFHAFVDQMDDETARKQAA
                     RCMDCGIPFCQNGCPVNNKIPDWNDLVYKADWKRALDSLLSTNNFPEFTGRICPAPCE
                     AACTLGISADPVGIKSIEHKIIDKGWEEGWVVPQPAKIKTGKRVAIVGSGPAGLACAQ
                     QLTRVGHAVTVFEKNDRIGGLLRYGIPDFKLEKMHIDRRIDQLQKEDVVFRTNVY"
BASE COUNT          459 a          929 c          870 g          374 t
ORIGIN      
        1 accgcatcgg cggcaagtcg aacaccggcg agggcggcga ggacccggcg cgctaccggc
       61 gcgagatgcg cggcgaggcg gtcaaggaag gcgagacgct ggccgagatt ctcggcaagc
      121 agaacatcgt gcgcgacctc acgctcaagg ccggtgattc gctgcgctcg cggatcaagc
      181 aggtggcctc cgggcgcttc ggcgtcaccg cggcgtacct ggtctccgcc gaccagatcc
      241 agatcaagat cgcgcaaggc gcgaagcccg gcgaaggcgg ccagctgccc ggccacaagg
      301 tgtcgacgta catcgccaag ctgcgccact cggtgcccgg cgtgggcctg atctcgccgc
      361 cgccgcacca cgacatctat tccatcgagg atctcgccca gctcatccac gacttgaaga
      421 gctgcaaccc gcgcgccgac gtgtcggtga agctggtgtc cgaggtgggc gtgggcacgg
      481 tcgcggccgg cgtcgccaag gccaaggccg atcacatcgt gatcgccggc cacgacggcg
      541 gcaccggcgc ctcgccgtgg tcgtcgatcc gccacgccgg ttcggcgtgg gaactgggcc
      601 tggccgagac ccagcagacc ttggtactga accgcctgcg cggccgcgtg tgcgtgcagg
      661 cggacggcca gatgaagacc ggccgtgatg tggtgattgc cgcgctgctc ggcgccgacg
      721 agttcggctt cgccaccgcg ccgctggtga cccagggctg catccagatg cgcaaggggc
      781 agctcaacac ctgccccacc ggcatcgcca cccaggaccc ggagctgcgt cggcgcttca
      841 acggcaagcc cgagtacgtg gtgaactact tcttcttcgt cgccgaggaa gtgcgccagc
      901 tgatggcgaa gctcggcttc cgccagttcg acgacatgat tggccgcgcg gatctcctgg
      961 acacgcgcgc cggcatcgag cactggaaag cgcgcgggct ggatttctcg cgcgtgttcc
     1021 accgcccgca ggtgccggaa ggcaccgcgt ggcgccacgt ggaataccag gaccacgagc
     1081 tcggcaacgc gttcgaccac gtgctgatcg acaaggcgaa ggccgcactc gagcacggtg
     1141 agcaggccag cttcatcgtc gacatccgca acgcccaccg cagcgtgggg gcgatgcttt
     1201 ccggcgtgct cgcgcgcctg cacggacagg ccggcctgcc ggacgacacc atccacgtgc
     1261 agctgagcgg caccgccggg cagagcttcg gcgcgttcct cgcccacggc atcaccttcg
     1321 acctggtcgg ccaggccaac gactacgtcg gcaaggggct gtccggcggc cgcatcatcg
     1381 tgcgctcgcc gaacgacttc cacggcttcg gcccggacca catcatcgcc ggcaacacgc
     1441 tgttgtacgg cgcgaccagc ggcgaggcgt acttcaacgg cgtggccggc gagcgcttcg
     1501 cggtgcgcaa ctccggcgcg atcgccgtcg tcgagggcgt cggcgaccat ggttgcgaat
     1561 acatgaccgg cggcaccgtg gtggtgctcg gcgagaccgg gcgcaatttc gcggccggca
     1621 tgtccggcgg cgtcgcctac gtgtacgacc cgcacaacca gttcgaggca cgcgccaacc
     1681 tcgccatggt cgcgctcgaa ccggtgctct ccggcgtcga gcagggcgtg cgcgtcgatc
     1741 gcgcgcagtg gcaccgcgtc gggggcagcc tggcgcaacc ggaaaccgac gaggcgatcc
     1801 tgcgccggct gctggaagcg cacttccgct acaccggcag cttccgcgcc aaggaaatcc
     1861 ttaccgactg gccgaccatg cgcggccgct tcgtgaaggt gatgccgacc gactaccggc
     1921 gcgccctgat cgaagtcgcc accgcacgcg ctgccgccac tgccaccgtc tgaggttcac
     1981 cacgccatgg gcaagatcac cggctttctc gaaatcccgc ggcaacccga gccaacccgg
     2041 ccggtcgccg agcgcaagca ggatttccat gccttcgtcg accagatgga cgacgagacc
     2101 gcgcgcaagc aggccgcgcg ctgcatggat tgcggcatcc cgttctgcca aaacggctgc
     2161 ccggtcaaca acaagatccc ggactggaac gacctcgtct acaaggccga ctggaagcgc
     2221 gctctggatt cgctgctgtc caccaacaac ttccccgagt tcaccggccg catctgcccc
     2281 gcgccgtgcg aggccgcgtg cacgctgggg atctccgccg acccggtggg catcaagtcg
     2341 atcgagcaca agatcatcga caagggctgg gaggaaggct gggtggtgcc gcagccggcc
     2401 aagatcaaga ccggcaagcg cgtggccatc gtcggttccg gccccgccgg tctcgcctgc
     2461 gcgcaacagc tcacccgcgt cggccatgcg gtgaccgtgt tcgagaaaaa cgaccgcatc
     2521 ggcggcctgc tgcgctacgg catcccggat ttcaagctgg aaaagatgca catcgaccgc
     2581 cgcatcgacc agctgcagaa agaggacgtg gtgttccgca ccaacgtcta cg
//
LOCUS       DASSVL010000298         2902 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_882839, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000298 DASSVL010000000
VERSION     DASSVL010000298.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2902)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2902)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2902
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_882839"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..577)
                     /locus_tag="VFM52_05155"
     CDS             complement(<1..577)
                     /locus_tag="VFM52_05155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate-dependent dioxygenase"
                     /protein_id="HET8764588.1"
                     /translation="MQRHAQLTPEWRDWIIENLARGCAPEALVADMVGRGFDPAFARA
                     SVVRHAPGAVAVESGAALSPAAAFVAETPRIPPGNVIRTHDRAVHVGMRLARPIVVVL
                     RDVLSQEECAELIRRSAAKLARSTTVDPQDGSYKVDAGRTSHGTYFPRGDDTFIANVE
                     QRLATIMGMPVENGEGLQILHYLVGGEYRPHF"
     gene            complement(657..1583)
                     /locus_tag="VFM52_05160"
     CDS             complement(657..1583)
                     /locus_tag="VFM52_05160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007080379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M14 family metallocarboxypeptidase"
                     /protein_id="HET8764589.1"
                     /translation="MATEQAFYPIGTPGKPWGPPEVAAWRARQVRQRSYASEVALRID
                     ALRSRYDVSEYGTLEYAPDRYPLYVLRSQSWNDELPTMIVTGGVHGYETSGVHGALQF
                     LERDAARFLDRINLLAVPCVSPWGYERIHRWNPDALDPNRNFRAHSPAQESAALWRLL
                     SPLADVALMHIDLHETTDTDESEFRPALAARDGKDYVPGTIPDGFYLCGDSARPEPAF
                     QQAVIAAVAKVTHIAPADPDGTIIGSPVVAHGVIEYPCREWGLCAGITNARYRTTTEV
                     YPDSPRATPAQCNDAQAAAAAAAIEYALAHAD"
     gene            complement(1621..>2902)
                     /locus_tag="VFM52_05165"
     CDS             complement(1621..>2902)
                     /locus_tag="VFM52_05165"
                     /inference="COORDINATES: protein motif:HMM:NF013799.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="alkaline phosphatase family protein"
                     /protein_id="HET8764590.1"
                     /translation="RAKVVVISLDAFAAHSLHETRLPAPTLQALMRAGSYAVSMRPIN
                     PTITWPNHSSMVTGADASRHHVLMNGLVTGQRGNAPPKVDMQAPKSTLVAVPTVYDAA
                     HAAGLTTAQVDWVPTEGARTFNWQFAEHPDPDGTIANDLVAEGVLGADDLAHFGAASQ
                     AWRDRIYTRAAIGIIRKHHPDLLLVHLLALDSIEHDTGYGNDAGRNTIAFLDDRVRDI
                     VRAVREAGDLPDTTFLIVSDHGQRSVHWRLRPNVLLQQAGLQGPDAKQAAYSLAGDGY
                     ALVYQRDATPASLAALRTLLAGRQGIAQVLTPVEAARLGWPTPAQTAQAPDLLLYAKP
                     DYTFRDGAEGAFATHGSEIGDHGYPNTDPLMQGIFIAAGRGVRHAGEVPAVSVMDVAP
                     TVAALLGIPFASPQGKPVASVLALPVVPVPAPGH"
BASE COUNT          380 a         1000 c         1079 g          443 t
ORIGIN      
        1 cgaagtgcgg gcggtactcg ccgccgacga gataatgcag gatctgcagg ccctcgccgt
       61 tctcgaccgg catgcccatg atcgtcgcca gccgttgctc gacgttcgcg atgaaggtgt
      121 cgtcgccacg cgggaagtag gtgccgtgac tggtgcggcc ggcatccacc ttgtagctgc
      181 catcctgcgg gtcgaccgtg gtcgagcgcg cgagcttggc cgcggagcga cggatgagct
      241 ccgcgcattc ctcctggctg agcacgtcgc gcagcaccac cacgatgggc cgggccagcc
      301 gcatgccgac gtgcacggcg cggtcatgcg tgcggatgac gttgcccggc gggatgcgcg
      361 gcgtctcggc gacgaacgcg gcggccggcg acagcgcggc gccggattcg accgccaccg
      421 cgccgggcgc gtggcgcacg acgctcgccc gtgcaaaagc cggatcgaaa ccgcggccga
      481 ccatgtccgc caccagcgct tccggcgcgc agccgcgcgc caggttctcg atgatccagt
      541 cacgccactc gggcgtcagt tgcgcatggc gttgcatgtc ccttccccgt gggcaccgcg
      601 cccaggtgtg agctggcggc gccacgcgga cgacgcgcgg cgggccacgc cgcggctcag
      661 tccgcgtggg ccagcgcgta ctcgatcgcg gcggcggccg ccgcggcctg ggcgtcgttg
      721 cactgtgccg gcgtcgcgcg cgggctgtcc gggtacacct cggtggtggt gcggtagcgc
      781 gcgttggtga tgccggcgca caggccccat tcgcggcagg gatactcgat cacgccgtgc
      841 gccaccaccg gcgagccgat gatggtgccg tccgggtcgg ccggcgcgat atgcgtgacc
      901 ttggccaccg cggcgatcac cgcctgctgg aacgcgggct ccggccgtgc gctgtcgccg
      961 cacaggtaga agccgtcggg aatcgtgccc ggcacgtagt ccttgccgtc gcgcgcggcc
     1021 agcgccgggc ggaattcgct ctcgtcggta tccgtggttt cgtgcaggtc gatgtgcatc
     1081 aacgccacgt cggccagcgg cgagagcagg cgccacagcg ccgccgactc ctgcgccggg
     1141 ctgtgcgcgc ggaagttgcg gttggggtcg agcgcatccg gattccagcg gtggatgcgc
     1201 tcgtagcccc atgggctcac gcacggcacc gcgaggaggt tgatgcggtc gaggaagcgc
     1261 gcggcgtcgc gttcgagaaa ctgcagcgcg ccatgcacgc cgctcgtttc gtagccatgc
     1321 acgccgccgg tgacgatcat cgtcggcagc tcgtcgttcc agctctggct gcgcagcacg
     1381 tacagcgggt agcgatccgg cgcgtactcg agcgtgccgt actcgctgac gtcgtagcgg
     1441 ctgcgcagcg cgtcgatgcg caacgcgacc tcggaggcat agctgcgctg gcgcacctgc
     1501 cgcgcgcgcc acgcggcgac ctcgggcggc ccccacggct tgcccggagt gccgatcggg
     1561 tagaacgcct gctcagtggc catgaagggc tccaaaaacg acggggaatg gccggttact
     1621 ctaatgcccg ggtgccggca ccggaaccac cggcaacgcc agcacgctgg cgaccggctt
     1681 gccctgcggg gacgcgaacg ggatgccgag cagcgcggcg acggtcggcg ccacgtccat
     1741 caccgacact gcggggactt cgccggcatg ccgcacgccg cggccggcgg cgatgaagat
     1801 gccttgcatc agcgggtcgg tgttcgggta gccgtggtcg ccgatctcgc tgccgtgggt
     1861 ggcgaacgcg ccttcggcgc cgtcgcggaa ggtgtagtcg ggcttcgcat agagcagcag
     1921 gtccggcgcc tgcgcggtct gggccggcgt cggccagccc aggcgcgccg cctcgaccgg
     1981 tgtgagcacc tgcgcgatgc cctgccggcc ggccagcagc gtgcgcagcg cggccagcga
     2041 cgccggcgtc gcgtcgcgct ggtacaccag tgcgtagccg tcgccggcca ggctgtacgc
     2101 ggcctgcttc gcgtccggtc cttgcaggcc ggcttgctgc agcagcacgt tcgggcgcag
     2161 ccgccagtgc acgctgcgct ggccgtggtc ggaaacgatc aggaacgtgg tgtccggcaa
     2221 gtcgccggct tcgcgcacgg cgcgcacgat gtcgcgcacg cggtcgtcga ggaacgcgat
     2281 ggtgttgcgc cccgcgtcgt tgccgtagcc ggtgtcgtgc tcgatgctgt ccagcgccag
     2341 caggtgcacc agcagcaggt cggggtggtg cttgcggatg atgccgatcg cggcgcgggt
     2401 gtagatgcga tcgcgccacg cctgcgaggc cgcgccgaag tgcgcgaggt cgtcggcgcc
     2461 gagcacgcct tcggcgacca ggtcattggc gatcgtgccg tcggggtcgg ggtgctcggc
     2521 gaattgccag ttgaacgtgc gcgcgccttc ggtcggcacc cagtccacct gcgccgtggt
     2581 gagtccggcc gcatgcgcgg cgtcgtacac cgtgggcacc gcgaccagcg tcgacttcgg
     2641 cgcctgcatg tccaccttcg gcggcgcatt gccgcgctgg ccggtgacca gcccgttcat
     2701 cagcacgtgg tggcggctgg catcggcgcc ggtgaccatg ctgctgtggt tgggccaggt
     2761 gatggtcggg ttgatcggcc gcatcgacac ggcgtagctg ccggcgcgca tcagcgcctg
     2821 cagcgtcggc gccggcaggc gcgtctcgtg caagctgtgc gcggcgaacg catcgaggct
     2881 gatgaccacg acctttgccc gc
//
LOCUS       DASSVL010000299         2104 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1080891,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000299 DASSVL010000000
VERSION     DASSVL010000299.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2104)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2104)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2104
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1080891"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..668
                     /locus_tag="VFM52_05170"
     CDS             <1..668
                     /locus_tag="VFM52_05170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007082205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HET8764591.1"
                     /translation="PILLAWSGGKDCLAALARLKADPARQPVALLTTLTRAFDRVSMH
                     GIRHAVLRAQAESLGLPLIECALDWPSSNADYESAMAAALRQAQTRFPGLDHCAFGDL
                     FLADVRAYREAQLARAGWYGVFPLWGADTREQARRFIAAGHRAVLTCVDTTQLDAGFS
                     GREFAADLLADLPPGVDPCGEHGEFHTLAFAGPLFAQPLTLQRGGSTLRDGRFQYTDF
                     SLA"
     gene            complement(722..1693)
                     /locus_tag="VFM52_05175"
     CDS             complement(722..1693)
                     /locus_tag="VFM52_05175"
                     /inference="COORDINATES: protein motif:HMM:NF018028.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RDD family protein"
                     /protein_id="HET8764592.1"
                     /translation="MMTGASPSLLPTHATSPGLYAGFWLRVVAYFIDGLVLAPVFAAF
                     YLALGGSLGWPWPEPGGAWSRPASASGWWLAWVVIPWLYFAGCESSELRATPGKLALG
                     LRVTDACGRRIGFARATGRFFGKFVSGIILDIGYLLAAWTARKQALHDLLADCCVVRK
                     SGLAAWQQAPVDSAPAARPAGMPGWAIGLVAAACLVLLLPVAGAVSLVAIPLYRYHAV
                     RTEVAQGVDLTQRARALVGEFITQRGNLPNDNRALGLPLPEAIHARYVVSVGVMEGKV
                     VVTYGNDADARISGGHVVFSPVGDAARLRWQCSSPDIRDAYLPSGCR"
     gene            complement(1757..>2104)
                     /locus_tag="VFM52_05180"
     CDS             complement(1757..>2104)
                     /locus_tag="VFM52_05180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012479233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isoaspartyl peptidase/L-asparaginase"
                     /protein_id="HET8764593.1"
                     /translation="DKRWGRIGDSPVIGAGTYANAACAMSGTGWGEFYIRTAAAHAVC
                     MRVAEMGETVSAATEAVINRAIPALGGSGGAIVLGADGTFALPFNTDGMYRGCMGADG
                     GPRVGIWPHERLA"
BASE COUNT          358 a          787 c          673 g          286 t
ORIGIN      
        1 agcccatcct gctggcgtgg agcggcggca aggattgcct cgcggcgctt gcgcgcctca
       61 aggccgatcc tgcccggcag ccggtcgcgt tgctgacaac gttgacgcgc gcattcgatc
      121 gcgtatcgat gcacggcatc cgccacgccg tgctccgcgc gcaagccgaa tcactcggcc
      181 tgccgctcat cgaatgcgcg ctcgactggc cgtccagcaa cgcggactac gaatcagcca
      241 tggccgcggc gctgcggcag gcacagacgc gcttccccgg cctcgaccac tgtgcgttcg
      301 gcgacttgtt cctggccgac gtgcgcgcgt atcgcgaagc gcaactcgca cgcgcaggct
      361 ggtacggcgt gttcccattg tggggcgcgg acacccgcga gcaggcgcga cgcttcatcg
      421 ccgctggcca ccgcgcggtg ctgacgtgcg tcgatacgac gcagctcgat gccggtttca
      481 gcggccgcga attcgccgcg gacttgctgg ccgacctgcc gcccggcgtc gatccctgcg
      541 gcgaacacgg cgaattccac acgctcgcct tcgcaggccc gctgtttgcg cagccgctga
      601 cattgcagcg cggtggatcg accctgcgcg acggccgttt ccagtacacc gacttcagcc
      661 tcgcgtaaca ggaccgtggc gccgcgcatc acggccggcc gcagcggacc gaacccgcgc
      721 ctcaacgaca gccgctgggc aaatacgcgt cgcgaatgtc ggggctgctg cactgccagc
      781 gcaggcgcgc cgcgtcaccg accggcgaaa acacgacgtg gccgccgctg atccgcgcat
      841 ccgcgtcgtt gccgtaggtg acgacgacct tgccctccat cacgccgacg ctcacgacat
      901 aacgcgcgtg gatggcttcg ggtaacggca agcccaaggc tcgattgtcg ttcggcaagt
      961 tgccgcgctg ggtgatgaac tcgcccacca gcgcgcgcgc ccgctgggtg agatcgacac
     1021 cttgcgcaac ttcggtgcgc accgcgtggt agcggtaaag cggaatcgcc accagcgaca
     1081 ccgcgccggc gaccggcagc agcaagacga ggcacgcggc ggccacgagg ccaatggccc
     1141 agcccggcat gccggctggc cgcgccgcgg gcgcactgtc caccggcgcc tgttgccatg
     1201 ctgcgaggcc cgatttgcgc accacgcagc aatcggccag caggtcgtgc agcgcctgct
     1261 tgcgcgccgt ccacgccgcc agcagatagc cgatgtcgag gatgatgccc gacacgaact
     1321 tgccgaagaa ccggcccgtc gcgcgcgcga aaccgatccg gcgaccgcat gcgtcggtca
     1381 cgcgcaatcc cagcgccagc ttgccgggcg tcgcccgcag ctctgaagac tcgcagcctg
     1441 cgaaatacag ccacggaatc acgacccagg ccagccacca gcccgacgcg gacgccggcc
     1501 gcgaccacgc accgcccggc tccggccacg gccacccgag cgacccgccg agcgccaggt
     1561 aaaacgcggc gaataccggc gccagcacca ggccatcgat gaaataggcc accacgcgca
     1621 accagaatcc ggcatacagc cccggacttg tggcgtgggt tggaagcagc gacggtgaag
     1681 cgccggtcat catgtccagg tccacatgca aacgcgtccc atcgtcgcag aatcgcggcc
     1741 cggcgtcagc gtaccgtcac gccaggcgtt catgcggcca gatgccgacg cgcggcccgc
     1801 catccgcgcc catgcaaccg cgatacatgc cgtcggtgtt gaacggcaac gcgaacgtgc
     1861 cgtccgcacc cagcacgatc gcaccgccgc tgccgccgag tgcgggaatc gcgcggttga
     1921 tgacggcttc cgtcgccgcc gatacggtct cgcccatctc ggcgacgcgc atgcacaccg
     1981 cgtgcgccgc ggccgtgcgg atgtaaaact caccccagcc ggtaccgctc atcgcgcacg
     2041 cggcgttggc gtaggtgccg gcaccgatca ccggtgaatc gccgatgcgg ccccagcgtt
     2101 tgtc
//
LOCUS       DASSVL010000300         2867 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1236122,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000300 DASSVL010000000
VERSION     DASSVL010000300.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2867)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2867)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2867
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1236122"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..436
                     /locus_tag="VFM52_05185"
     CDS             <1..436
                     /locus_tag="VFM52_05185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008214253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8764594.1"
                     /translation="PLNANKIFHFNPNGTVYSRAEALIDVNGMVGFSFQATKDAFYGQ
                     YAPGRLLLLSYEGLTGDPKTAMQAVYKFIGEPWFEHDFEHIDYKADEFDARLGLPGLH
                     TVKSKVSAPKRESVLPPDLFNRFVKDSFWLDPKNNIRKVPIV"
     gene            complement(566..1732)
                     /locus_tag="VFM52_05190"
     CDS             complement(566..1732)
                     /locus_tag="VFM52_05190"
                     /inference="COORDINATES: protein motif:HMM:NF018485.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbfB/YjiJ family MFS transporter"
                     /protein_id="HET8764595.1"
                     /translation="MNDSTVPETTAGAATIAIAGLVALAVAMGIGRFAFTPIMPMMEA
                     DAGLTLRAAGWLAAANYLGYFIGALCAARLSLRQAVRGGLLLIAAVTFAMGIAHVFWL
                     QLILRLLAGVASAWVLVHVSAWALTRLQELGRGGAGGTLYAGVGIGVAAAGLLVMGAM
                     QAQWHSDRTWQLFGVLSLLVALALWRAFRGRDPAARGHDGPSTRIHWNADKRRLLWCY
                     GALGIGYIIPATYLPEMAHRYITDPLVFGLAWPVFGAASALSTVIAARWLAHVNDRKL
                     WAACYLLMALGSALPALWPGLAAILVAALLVGGTYMVVTMQGLREARRAAGAEATPFI
                     AVMTASFAIGQIAGPLLVSAVAHLPHGFNAMLLAAAILVLLAAVSLWRSANATE"
     gene            1845..>2867
                     /locus_tag="VFM52_05195"
     CDS             1845..>2867
                     /locus_tag="VFM52_05195"
                     /EC_number="3.1.11.5"
                     /inference="COORDINATES: protein motif:HMM:NF016169.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease V subunit gamma"
                     /protein_id="HET8764596.1"
                     /translation="MFRLHTSNDAAKLADALGKQLCAARENPLLPAQVLVPQAGLRRW
                     LQVHLGEQLGVLANVAFVPPAQFTWDLLRAARPDLPERSPFDVEVLRWHVYALLGERL
                     DGAALTSLRDYLAGGGDPLRRYALALELARAYERMQGYRREKLLAWERGDDAGDWQAE
                     LWRRLLPRVGGVSRAARVDDWLRRFDPEYPPGRFEEKPAPPGLPQSFACFACSNVSPD
                     VLRMLAVAGLHCEVDFYLPLPSRGYLGDTPTRRHEVWQWLRDQRDGNPLITSQGGALA
                     AFIELLYGYQHVQPDEEIDLFDEDISRDTLLGRVRDDILKHAAPRTDDRTAQPDASLQ
                     FHACHTP"
BASE COUNT          510 a         1003 c          941 g          413 t
ORIGIN      
        1 gccgctcaac gccaacaaga tcttccattt caacccgaac ggcacggtgt actcgcgcgc
       61 cgaggcgttg atcgacgtga acggcatggt gggtttttcg ttccaggcca ccaaggatgc
      121 cttctacggc cagtacgcgc cggggcgcct gctgctgctg agttacgaag gactcaccgg
      181 tgatccgaag accgcaatgc aggcggtcta caagttcata ggcgaaccgt ggttcgaaca
      241 cgatttcgaa cacatcgact acaaggccga cgagttcgat gcgcggctcg gcctgcccgg
      301 cctgcacacc gtgaagtcga aggtgtcggc gcccaagcgt gaatcggtgc tgccgccgga
      361 cctgttcaac cgcttcgtca aggattcgtt ctggctggat ccgaagaaca atatccgcaa
      421 ggtgcctatc gtctgacaac gccgctgaag aaccgtcgcg agcgaaggcg gattgcgtga
      481 cgccggagcg cagcaagcgg agcgtacacg tcagtacgtg agcattgcga gcaccgccga
      541 cgcgcaagct gccgagcgca gcaggttatt cagtggcgtt cgccgaacgc cacaaggaca
      601 ccgccgccag caacaccaag atcgcggcgg caagcagcat ggcgttgaat ccgtgcggca
      661 ggtgcgcgac cgcgctcacc agcaacggcc ccgcgatctg cccgatcgcg aacgaggcgg
      721 tcatcaccgc gatgaacggc gtggcctcgg cgccggccgc gcgccgtgcc tcgcgcaagc
      781 cctgcatcgt caccaccatg taggtgccgc cgaccagcag cgccgcgacc aggatcgccg
      841 cgagacccgg ccacaacgcg ggcaacgcgg aacccagtgc catcagcagg tagcaggccg
      901 cccacagctt gcggtcgttg acgtgcgcca gccagcgcgc ggcgatgacg gtggacaacg
      961 ccgacgccgc gccgaacacc ggccatgcaa ggccgaatac cagcgggtcg gtgatgtagc
     1021 ggtgcgccat ttcgggaagg tacgtcgccg gaatgatgta gccgatcccc aacgcgccgt
     1081 agcaccacaa caggcggcgc ttgtcggcgt tccagtggat gcgcgtggaa gggccgtcat
     1141 ggccgcgcgc cgcgggatcg cggccgcgga acgcgcgcca cagcgccagc gccaccagca
     1201 gcgacagcac gccgaacagt tgccaggtgc gatcggaatg ccactgcgcc tgcatggcgc
     1261 ccatcacgag cagccccgcc gcggcgacgc cgatgccgac acccgcgtac agcgtgccgc
     1321 cggcgccgcc gcgaccaagc tcctgcaaac gcgtcaatgc ccacgcggac acgtgcacca
     1381 gcacccaggc gctggccaca cccgcaagca gtcgcaggat caattgcagc cagaacacat
     1441 gcgcaatgcc catcgcgaac gtcaccgccg cgatcagcag caggccgccg cgcactgcct
     1501 gcctgagcga caggcgcgcc gcgcacaggg cgccgatgaa atagccgagg tagttggccg
     1561 ccgccagcca gccggcggcg cgcagggtca ggccggcgtc ggcttccatc atcggcatga
     1621 tcggcgtgaa cgcgaaacgc ccgatgccca tcgccaccgc cagcgcgacc agaccggcga
     1681 tggcgatcgt cgcggcacct gccgtggtct cgggaaccgt ggaatcgttc atcatcgcat
     1741 tctatttgcg catgctttac cgcacgccga ccgaaggcgg ccgcccgtct cactccgtga
     1801 gcaggcggca ggcatactgg cgcgatcacc atcaccggcc cgccatgttc cgactgcaca
     1861 cctccaacga cgccgcgaag ctggccgatg cgctgggcaa gcaactgtgc gcggcgcgcg
     1921 agaatccgct gctgccggcg caggtgctgg tgccgcaggc gggattgcgg cgctggctgc
     1981 aggtgcacct cggtgaacaa ctcggcgtgc tggcgaatgt cgcgttcgtg ccgcccgcgc
     2041 agttcacgtg ggatttgctg cgcgccgcgc gccccgacct gccggaacgc tcgcccttcg
     2101 acgtcgaggt gctgcgctgg cacgtgtacg cattgctggg cgaacgcctc gatggcgcgg
     2161 cgctgacgtc gctgcgcgac tatcttgccg gcggcggcga tccgctgcgg cgctacgcac
     2221 tcgccctcga gctggcgcgc gcgtacgaac gcatgcaggg ttaccgtcgc gaaaagttgc
     2281 tggcgtggga gcgcggcgac gatgccggtg actggcaggc cgagctgtgg cggcgcctgc
     2341 tgccgcgcgt gggcggcgtc tcgcgtgccg cgcgggtgga cgactggctg cggcgcttcg
     2401 atccggaata tccgccgggc cgtttcgagg aaaagccggc gccgcccggc ctgcctcaat
     2461 cgttcgcctg ctttgcgtgc agcaacgtct cgcccgacgt gctgcggatg ctggcggtcg
     2521 cgggcctgca ttgcgaggtc gatttctact tgccgctgcc gtcgcgcggc tacctcggcg
     2581 acacaccgac ccgacgccat gaggtatggc aatggctgcg cgaccagcgg gacggcaacc
     2641 cgttgatcac ctcgcaaggt ggcgcactgg ccgcgttcat cgaactgctc tacggctacc
     2701 agcatgtgca accggacgag gaaatcgact tgttcgacga ggacatctcg cgcgacaccc
     2761 tgctcggccg cgtgcgcgac gacatcctga agcacgccgc accgcgcacc gacgatcgca
     2821 cggcgcaacc cgatgcttcg ctgcagttcc acgcctgcca cacgccg
//
LOCUS       DASSVL010000301         3718 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_374157, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000301 DASSVL010000000
VERSION     DASSVL010000301.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3718)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3718)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3718
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_374157"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..135)
                     /locus_tag="VFM52_05200"
     CDS             complement(<1..135)
                     /locus_tag="VFM52_05200"
                     /EC_number="4.1.1.50"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005411315.1"
                     /note="S-adenosylmethionine provides the aminopropyl
                     moiety required for spermidine biosynthesis from
                     putrescine; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-adenosylmethionine decarboxylase"
                     /protein_id="HET8764597.1"
                     /translation="MVKPLPRLRLQGFNNLTKALSFNIYDICYAVSEDQRSRYIEYID
                     E"
     gene            542..1237
                     /gene="crp"
                     /locus_tag="VFM52_05205"
     CDS             542..1237
                     /gene="crp"
                     /locus_tag="VFM52_05205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008216819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cAMP-activated global transcriptional regulator
                     CRP"
                     /protein_id="HET8764598.1"
                     /translation="MALLKYQLQQAFEQSNAPLAFAPDPASMERVLGMCHRRRYPSKT
                     AIIRPGDPANILYYVIDGSLVVCNEDEQGRELILAYINRGQFIGEMGLFVEQAQRESV
                     VRTRTVCEMAEVSYERLFQLMKGPLAEECPKILVAIGAQLTNRLLRTSRQVSRMAFMD
                     VTNRISRTLLDLCEEPDAMTHPDGTQIRISRQEVSRIVGCSREMVGRVLKQLEEQGMI
                     SVAGKTIVVRGTR"
     gene            complement(1240..>3718)
                     /locus_tag="VFM52_05210"
     CDS             complement(1240..>3718)
                     /locus_tag="VFM52_05210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007810011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HET8764599.1"
                     /translation="QMERTESLQRALFAISDLAGSELDMAEVLQRLHGIVGTLMYAEN
                     FFIVRCDPQRQTVRFLYYADSEDTATPGLNADEPLDAMRDTLTWHLLTGGRPLMGDLP
                     TIQQQLRGGLAPIGPGAVDWLGVPMLRDGEVRGALVVQSYREGVRFNDEDRTLLQFVG
                     SHVLTALERKESRDELEERVRVRTAELATANAELQLEVAERKRAERLQSALYHLAQLA
                     TVDIDEAEFYQRVHAVVGDLINADNFFIALLTDDRRHLQFPYYVDGGTRRAMERELSR
                     GLSEYVLRTGQAFLGVPDDMRRLAAAGEIDLGRFGPISQCWLGVPLRVDDAAIGLVAV
                     QSYTAQVRYDEADRDLLGFVALQIASSIHRRRAATTLQRAYADLEQRVADRTRELRLE
                     IEERERIQERLKHDVTHDALTGLPNRGYLRERLNLRLAQQRTDGDSALLYLDVDRFKV
                     INDSLGHLAGDAFLQAIASRLRACVRAPDVVARLAGDEFAILLDAVGTPAEAEQVASR
                     VLAALHQPLTVGGRELEPSASVGVALGSGGRQRADGLLRDADRALYRAKELGRGRYVL
                     FDDSLARSAVDELAQETELRHALQHAEFEPFFQPIHRLGDGTVAGYEALLRWHHPRRG
                     LLPPSEFMRVAQDSGQLEVIDWQLYERVCRRMAKPDTGSAFVTINVPPQHLRRAGFER
                     RLLHLVERSGLAPGRLVIEITEGALLDDPLRVRDTLERLRASGVQAALDDFGTGYSSL
                     SYLHSLPLRMLKIDRAFVSELDRPGARSANSVVVAILALARALGIEVIAEGIETAVQH
                     TALQAMGCDYAQGFLFAYPAPLPLPAG"
BASE COUNT          616 a         1281 c         1279 g          542 t
ORIGIN      
        1 ctcgtcgatg tactcgatgt agcggctgcg ctggtcttcc gacaccgcat agcagatgtc
       61 gtagatgttg aagctcaggg ccttcgtcag attgttgaaa ccctgcaggc gcaggcgcgg
      121 tagcggcttg accacggcga ctctccatga ccggctggcg gtcagcagat gaggcgggtt
      181 agcaccaagg gtccccgcga aaatcaggac ggcggggacc cttgtcgccc gcgatccgac
      241 gaacgtcgtc ggtggaaccg gcggcgaagg actgcggagt atgcggcaaa tggcaaaaaa
      301 actgaaactg cgcgcgcgcg ccgcggtttg tcataatgga tcggatcggg gacgatcggg
      361 ggcgcagacc gccggcgtcc cgcttgctgc agctgagtga ccaggccaga tcgccttggc
      421 cgacgcggga acgcgcggcg cgcggattcg tgaccgaaga gggcacatgg cgaaccaacg
      481 accggcgcga ggcgccaagc cagggaaggc tccacgagcc aaaccggggg agaaaaacac
      541 tgtggcgcta ctcaagtacc agttgcagca ggcgttcgaa caatccaatg cgccgctcgc
      601 attcgcgccc gacccggcgt cgatggagcg cgtcctgggc atgtgccatc gccggcgcta
      661 cccgagcaag accgcgatca tccgccccgg cgacccggcc aacatcctgt actacgtgat
      721 cgacggctcg ctcgtggtgt gcaacgagga cgaacagggc cgcgagctga tccttgccta
      781 catcaaccgc ggccagttca tcggcgagat gggcctgttc gtcgagcagg cgcagcgcga
      841 gtcggtggtg cgcacgcgca ccgtgtgcga aatggccgag gtgagctacg aacggctgtt
      901 ccagctgatg aaggggccac tcgccgagga atgcccgaag atcctggtgg cgatcggcgc
      961 gcagctcacc aatcgcctgc tgcgcacttc gcgccaggtc agccggatgg cgttcatgga
     1021 cgtcaccaac cgcatctcgc gcacgctgct cgacctgtgc gaggagccgg atgcgatgac
     1081 ccatccggac ggcacccaga tccgcatctc gcggcaggaa gtcagccgca tcgtcggctg
     1141 ctcgcgcgaa atggtcgggc gcgtgctcaa gcagctcgag gagcagggca tgatcagcgt
     1201 cgccggcaag accatcgtgg tgcgcggcac gcgctgaaat cagcccgccg gcagcggcaa
     1261 cggcgccgga tacgcgaaca ggaacccctg cgcgtagtcg caacccatgg cctgcaacgc
     1321 ggtgtgctgc accgcggtct cgatgccctc ggcaatcacc tcgatgccga gcgcgcgcgc
     1381 cagcgcgagg atcgccacca ccacgctgtt ggcgctgcgc gcaccgggtc gatccagctc
     1441 gctgacaaac gcgcggtcga tcttcagcat gcgcagcggc agcgagtgca gatagctcag
     1501 cgaggaatac ccggtaccga aatcatccag cgccgcctgc acgccgctcg cgcgcaagcg
     1561 ctccagggtg tcgcgcacgc gcagcgggtc gtcgagcagc gcgccctcgg tgatctcgat
     1621 gaccagccgc ccgggggcaa ggccgctgcg ttccaccagg tgcagcaggc gccgctcgaa
     1681 accggcgcgg cgcaggtgct gcggcggcac gttgatggtg acgaaggcgc tgccggtatc
     1741 cggcttggcc atgcgccggc acacgcgctc gtacagctgc cagtcgatca cctcgagctg
     1801 gccgctgtcc tgcgccacgc gcatgaactc gcttggcggc aacaggccgc ggcgcgggtg
     1861 atgccagcgc aacaacgcct cgtagccggc gaccgtgccg tcgcccaggc gatggatggg
     1921 ctggaagaac ggctcgaact cggcgtgctg cagcgcgtgg cgcaactcgg tttcctgcgc
     1981 cagctcatcg accgcgctgc gcgccaggct gtcgtcgaac agcacgtaac ggccgcggcc
     2041 cagctccttg gcgcgataca gcgcgcgatc ggcgtcgcgc agcaggccgt ccgcgcgctg
     2101 ccggccgccg ctgcccagcg cgacgccgac gctggcggac ggctccagct cgcggccgcc
     2161 caccgtcagc ggctggtgca gggcggccag cacgcggctg gccacctgct ccgcctcggc
     2221 cggcgtgccc accgcatcga gcaggatggc gaactcgtcg ccggcaagcc gcgccaccac
     2281 gtccggcgca cgcacgcagg cgcgcagccg gctggcaatc gcctgcagga aggcgtcgcc
     2341 ggcgaggtgg cccaggctgt cgttgatgac cttgaaccgg tccacatcca gatacagcag
     2401 cgcactgtca ccgtcggtac gctgctgcgc caggcgcagg ttcagccgct cgcgcaggta
     2461 gccacggttc ggcaggccgg tgagcgcatc gtgggtgacg tcgtgtttca ggcgctcctg
     2521 gatgcgctcg cgttcctcga tctccagccg cagttcgcgc gtgcggtcgg ccacgcgctg
     2581 ttcgaggtcg gcatacgcgc gctgcagtgt cgtggccgcg cggcggcggt ggatgctgct
     2641 ggcgatctgc agcgcgacga aaccgagcag gtcgcggtcg gcctcgtcgt agcgcacctg
     2701 cgcggtgtag ctctgcaccg cgaccaggcc aatggcggca tcgtcgacgc gcagcggcac
     2761 gcccagccag cattgcgaga tcgggccgaa tcgcccgagg tcgatttcgc cggcggcggc
     2821 gaggcggcgc atgtcgtccg gcacgccgag gaatgcctgg ccggtgcgca acacgtattc
     2881 cgacagcccg cgcgacagct cgcgctccat cgcccggcgc gtgccgccat ccacgtaata
     2941 cggaaactgc aggtgccgcc ggtcgtcggt cagcaacgcg atgaagaaat tgtcggcatt
     3001 gatgaggtcg ccgaccacgg cgtgcacgcg ctggtagaac tcggcctcgt cgatgtcgac
     3061 ggtagccagc tgcgccaggt ggtacagcgc cgactgcagg cgctcggcgc gcttgcgttc
     3121 ggcgacctcc agctgcagct ccgcgttcgc cgtcgccagc tcggcggtgc gcacgcgcac
     3181 gcgctcctcc agctcgtcgc ggctctcctt gcgctccagc gcggtcagca cgtggctgcc
     3241 gacgaactgc agcagcgtgc ggtcctcgtc gttgaaccgg acgccctcgc ggtagctctg
     3301 caccaccagc gcgccgcgca cctcgccgtc gcgcagcatc ggcacgccga gccagtcgac
     3361 ggcgcccggg ccgatcggcg ccaagccgcc gcgcaattgc tgctggatcg tcggcaggtc
     3421 gcccatcaac ggccggccac cggtcaacag gtgccaggtc aaggtatcgc gcatcgcatc
     3481 cagcggctcg tcggcgttga ggcccggcgt cgcggtgtcc tcgctgtcgg cgtagtacag
     3541 gaaacgcacg gtctggcgtt gcgggtcgca gcgcacgatg aagaagttct cggcgtacat
     3601 cagcgtgccg acgatgccgt gcaggcgctg cagcacctcg gccatgtcga gctcggagcc
     3661 ggccaggtcg gagatcgcga acagcgcgcg ttgcaacgat tccgtgcgct ccatctgg
//
LOCUS       DASSVL010000302         3708 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_445041, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000302 DASSVL010000000
VERSION     DASSVL010000302.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3708)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3708)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3708
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_445041"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1052
                     /gene="ppk1"
                     /locus_tag="VFM52_05215"
     CDS             <1..1052
                     /gene="ppk1"
                     /locus_tag="VFM52_05215"
                     /EC_number="2.7.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007806180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009358 - polyphosphate kinase complex
                     [Evidence IEA];
                     GO_function: GO:0008976 - polyphosphate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006799 - polyphosphate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="polyphosphate kinase 1"
                     /protein_id="HET8764600.1"
                     /translation="IAQHDVLLHHPYQSFGAVVDLLRQASVDPQVLAIKQTLYRAGDD
                     SPLVDLLIDAARHGKDVTVVVELRARFDEAANIRLATRLQAVGVQVVYGVVGYKTHAK
                     MLLIVRREGEALRRYAHLSTGNYHQINSRTYTDLGLMTANPEIGEDLHKVFQQLSGLG
                     PRITLKHLLHSPFTLYRGVLERIERETALAQAGQPARIVAKLNALNEAHVIQALYRAS
                     IAGVEIDLIVRGACTLRPGLPGISERIRVRSIVGRFLEHSRVYWFGNGGKPELYCASA
                     DWMERNLMRRIEIAFPILDPDLAARAFEETLANGLADNTQAWLLAADGRYRRATPGGN
                     PPHAAQQHLLDKLCR"
     gene            1108..2625
                     /locus_tag="VFM52_05220"
     CDS             1108..2625
                     /locus_tag="VFM52_05220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008439523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Ppx/GppA phosphatase family protein"
                     /protein_id="HET8764601.1"
                     /translation="MSQADQNPILDGELLAAVDMGSNSFHLIVARMEHGEPRVIDRLR
                     DTVRLAAGLHADGSLDAGHRARALGCLAQFGQRIAGLPALHVRAVATNTVRQLAAPRA
                     FLTAAEAALGHPIEVVSGREEGRLIFLGAAHDLPASRKPRLVMDVGGGSTEFIIGRGL
                     APLHTESVQAGCIASTLHFFPGGRLGRKRWQRAHSELGVLLQQFAAEYRESGWQEAYG
                     SSGSAKAIGAIVQAMKLSDDGITPDALAAMREAILAQGSIDTLKLPGLAGDRAPVITG
                     AVVIFEAAFEALGIQRMRVCESSMREGLMWDLIGRAAGSDPRTSSIDALASRYAVDRA
                     QARRIETTALQLFDQVAGAWQLDAEAREWLSWASRVHEIGLAIAHSQHQHHGAYILRH
                     ADLAGFSRQEQQLLAAVVELHRRKPDKTLIAALPQRYRQLTRHITALLRLAVLFRRGR
                     RAEALPPLRLTATRARLRLAVPASWLAKHPLSEADLQQERAPMHELGIALELSTD"
     gene            2671..3378
                     /locus_tag="VFM52_05225"
     CDS             2671..3378
                     /locus_tag="VFM52_05225"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008439524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_process: GO:0000413 - protein peptidyl-prolyl
                     isomerization [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HET8764602.1"
                     /translation="MPKLRFLLAFSFAALFAPALAAQTAPAAPAPATAPAANGPEVVL
                     HTSQGDITLQLYPDKAPKSVANFLQYVRDGFYAGTVFHRVIPGYLVQGGLYTRELQPR
                     RTRPAIPSEADNGLSILRGTIAVARGADPNSGTAQFFINLVDNRRLDFVGNESSLTWG
                     YAVFGKVVKGMDVVDKIAKLPTRGIGPFAADVPNPLVVIEGAQVVGDAAPAASVAPKA
                     VSTGPEPAPRRVKPAGR"
     gene            3380..>3708
                     /locus_tag="VFM52_05230"
     CDS             3380..>3708
                     /locus_tag="VFM52_05230"
                     /EC_number="3.6.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015448218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016462 - pyrophosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-2,3-diacylglucosamine diphosphatase"
                     /protein_id="HET8764603.1"
                     /translation="MSTLFIADLHLDDSRPAITKLFEHYLASDEVRSADALYILGDLV
                     EAWIGDDDDAELPARIAAATRAVRDAGVPVYFMVGNRDFLLGETFARRAGMTLLDDGT
                     VHDIQGRP"
BASE COUNT          568 a         1428 c         1212 g          500 t
ORIGIN      
        1 tgatcgcgca gcacgacgtg ctgctgcacc acccgtacca gagcttcggt gcggtggtgg
       61 acctgctgcg ccaggcctcg gtcgacccgc aggtgctggc gatcaagcag accctgtacc
      121 gcgccggcga cgacagcccg ctggtggatc tattgatcga cgccgcccgc cacggcaagg
      181 atgtgaccgt ggtggtggag ctgcgcgcgc gcttcgacga ggccgccaac atccgcctcg
      241 cgacccggct gcaggcggtg ggcgtgcagg tggtgtacgg cgtggtcggc tacaagacgc
      301 acgccaagat gctgctgatc gtgcgccgcg agggcgaggc gctgcgccgc tacgcgcacc
      361 tctccaccgg caactaccac cagatcaaca gccgcaccta caccgacctc gggctgatga
      421 ccgccaaccc cgagatcggc gaggacctgc acaaggtgtt ccagcagctt tccgggctgg
      481 gcccgcgcat cacgctgaaa cacctgctgc attcgccgtt caccctgtac cgcggcgtgc
      541 tcgaacgcat cgagcgcgaa accgcgctgg cccaggccgg ccagccggcg cgcatcgttg
      601 ccaagctcaa cgcactgaac gaggcgcacg tgatccaggc gctgtaccgc gcctcgatcg
      661 ccggcgtgga gatcgacctc atcgtgcgcg gcgcgtgcac cctgcgcccc ggcctgcccg
      721 gcatctccga gcgcatccgc gtgcgctcca tcgtcggccg cttcctggaa cacagccgcg
      781 tgtactggtt cggcaacggc ggcaagccgg agctgtactg cgccagcgcc gactggatgg
      841 agcgcaacct gatgcgccgg atcgaaatcg ccttcccgat cctcgatccc gatctcgccg
      901 cgcgtgcgtt cgaggaaacc ctggccaacg ggctcgccga caacacccag gcctggctgc
      961 tcgccgccga cggccgctat cggcgcgcga cgccaggcgg caatccgccg cacgccgccc
     1021 agcagcacct gctggacaag ctgtgccgat gaccgcgacg atgcggcatt gccgcgccca
     1081 ccgtgcgccg ccgcagggac cccgcgcttg agccaggccg accagaaccc gatcctcgac
     1141 ggcgagctgc tcgccgcggt ggacatgggg tccaacagct tccacctgat cgtggcgcgc
     1201 atggagcatg gcgagccgcg cgtgatcgac cgcctgcgcg acaccgtgcg ccttgccgcc
     1261 ggcctgcacg cggacggctc gctggatgcc ggacaccgcg cccgcgcgct gggctgcctg
     1321 gcgcaattcg gccagcgcat cgccgggctg ccggcgctgc acgtgcgcgc ggtggccacc
     1381 aataccgtgc gccagctggc cgcgccgcgc gcgtttctca ccgccgccga agccgcgctc
     1441 gggcatccca tcgaagtggt gtccgggcgt gaggaaggcc gcctgatctt tctcggcgcc
     1501 gcgcacgacc tgcccgcctc gcgcaagccg cggctggtga tggacgtggg cggcggcagc
     1561 accgagttca tcatcggccg cggcctcgcg ccgctgcata ccgaaagcgt gcaggccggc
     1621 tgcatcgcct ccacgctgca tttcttcccc ggcggcaggc tcggccgcaa gcgctggcag
     1681 cgcgcgcaca gcgagctcgg cgtgctgctg cagcagtttg ccgcggagta ccgcgaatcc
     1741 ggctggcaag aggcctacgg ctcctccggc agcgcgaagg cgatcggcgc catcgtgcag
     1801 gcaatgaagc tctccgacga cggcatcacc ccggacgcgc tggccgcgat gcgcgaggcg
     1861 atcctcgccc agggctcgat cgacacgctg aaactgccgg gcctcgccgg cgaccgcgca
     1921 ccggtcatca ccggcgcggt ggtgatcttc gaggccgcgt tcgaggcact cggcatccag
     1981 cgcatgcgcg tgtgcgaaag ctcgatgcgc gaaggcctga tgtgggacct gatcggccgc
     2041 gccgccggca gcgacccgcg caccagcagc atcgacgcgc tggccagccg ctacgccgtc
     2101 gaccgcgcgc aggcgcgccg catcgagacc accgcgctgc aattgttcga ccaggtggcc
     2161 ggcgcgtggc agctcgacgc cgaggcgcgc gaatggctgt cctgggccag ccgcgtgcac
     2221 gagatcggcc tcgccatcgc gcacagccag caccagcacc acggcgccta catcctgcgc
     2281 cacgccgacc tggccgggtt ctcgcgccag gaacagcaac tgctggcggc ggtggtcgag
     2341 ctgcaccggc gcaagcccga caaaacgctg atcgccgcgc tgccgcagcg ctaccgccag
     2401 ctcacccgcc acatcaccgc gctgctgcgg ctggccgtgc tgttccgccg cgggcgccgc
     2461 gccgaggcgc tgccgcccct gcggctcacc gccacgcgcg cacggctgcg cctggcggtg
     2521 ccggccagct ggctggcgaa acatccgctg agcgaagccg acctgcagca ggagcgcgcg
     2581 ccgatgcacg agctgggcat cgcgctcgaa ctctccaccg attgagggct gccgcgtatc
     2641 atcgccagac acctgtcgcg atgccacgcc atgccgaagc ttcgattcct cctcgcgttc
     2701 tccttcgccg ccctgttcgc cccggcgctg gccgcgcaaa ccgcgccagc ggcgcccgca
     2761 ccggcaacgg cgcctgccgc caacgggccg gaagtggtgc tgcacacttc gcagggcgac
     2821 atcacgctgc agctctaccc ggacaaggcg cccaagagcg tcgccaattt cctgcaatac
     2881 gtgcgcgacg gcttctacgc cggcaccgtg ttccaccgcg tgatccccgg ctacctcgtg
     2941 cagggcgggc tgtacacgcg cgagctgcag ccgcggcgca cgcgcccggc cattcccagc
     3001 gaggccgaca acgggctgtc catcctgcgc ggcaccatcg ccgtcgcacg cggcgccgac
     3061 cccaactccg gcaccgcgca gttcttcatc aacctggtcg acaaccgccg gctggatttc
     3121 gtcggcaacg aaagcagcct gacctggggc tacgccgtgt tcggcaaggt ggtgaaaggc
     3181 atggacgtgg tcgacaagat cgccaagctg cccacccgcg gcatcggccc gttcgccgcc
     3241 gacgtgccca acccgctggt ggtgatcgaa ggcgcgcaag tcgtgggtga cgcggcgccc
     3301 gccgccagcg tcgcgcccaa ggccgtctcc accggccccg agcccgcacc gcgccgggtc
     3361 aagcccgccg gccgctgaca tgtccacgct gttcatcgcc gacctgcacc tggacgacag
     3421 ccgcccggcc atcaccaagc tgttcgagca ctacctcgcc agcgacgaag tgcgcagcgc
     3481 ggatgcgctg tacatcctcg gcgacctcgt cgaagcctgg atcggcgacg acgacgacgc
     3541 cgagctgccc gcgcgcatcg ccgccgccac ccgcgccgta cgcgacgccg gcgtgccggt
     3601 gtacttcatg gtcggcaacc gcgacttcct gctcggcgaa acctttgccc gccgcgccgg
     3661 catgaccctg ctcgacgacg gcaccgtgca cgacatccag ggccggcc
//
LOCUS       DASSVL010000303         2300 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_741617, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000303 DASSVL010000000
VERSION     DASSVL010000303.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2300)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2300)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2300
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_741617"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..184)
                     /locus_tag="VFM52_05235"
     CDS             complement(<1..184)
                     /locus_tag="VFM52_05235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007080719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA family protein disulfide reductase"
                     /protein_id="HET8764604.1"
                     /translation="MTDSNLAPEWQVSRWFNSTPLTLAGLRGKVVVAHAFQMLCPGCA
                     MTALPQMQRLHAAFPPE"
     gene            373..>2300
                     /locus_tag="VFM52_05240"
     CDS             373..>2300
                     /locus_tag="VFM52_05240"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008210471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M13 family metallopeptidase"
                     /protein_id="HET8764605.1"
                     /translation="MHHSHWLLATAIAAGLCGTPAWAATPATPDARIGIDLAGIDHAV
                     KPGDNFFDYANGNWLKTAQIPADRSSTGTFLKIFELTEQHTADLIRNAGASHPAAGSN
                     ARKIADYYAAYMDEAAIARNGLKPVQPELAAIAAIKSKDELARMLGSRLRADVDPINS
                     TNFHTEHLFGLFVTQGLEDPSHTIAYLLQGGLAMPSRDYYLSTDPHMAEARGKYHAYV
                     VALLKQAGIAQPEHTADTVIALETRIAKAQETLIDSQDVHKANNLWTPADFAKKAPGL
                     DWTAYFKAAGLAGQKAIDVWQPSATTGLAALVGSEPLDAWKDLLAFHTLDAAAPLLPK
                     AFADLHFDFYGHTLQGTPEQQPRWKRAVGATNTDLGDAVGQLYVAKYFPASSKAEVQQ
                     LVRNLIAAFNERLDTLAWMTPATRAKAKEKLETLKVGVGYPETWRNYAALDIKADDPL
                     GNHQRAVKHEYEHQLAKLGKPVDRGEWWMTPQTVNAVNLPLQNALNFPAAILQAPFFD
                     PKADAAANYGAIGAIIGHEISHSFDNTGADFDAQGKLENWWTPADEAHFKSATAQLAK
                     QFDQYEALPGLHVNGEQTLGEDIADVSGLTIAYLAYHKSLGGKPAPVIDGLTGDQRFF
                     LAFAQSWREKKRDAALRA"
BASE COUNT          424 a          857 c          734 g          285 t
ORIGIN      
        1 gctcgggcgg gaacgccgcg tgcaggcgct gcatctgcgg caacgcggtc atcgcacagc
       61 ccggacagag catctggaac gcatgcgcga cgacgacctt gccgcgcagg ccggccagcg
      121 tgagcggcgt gctgttgaac cagcgggaaa cctgccactc gggcgccagg ttggaatcgg
      181 tcatgcggag cctccggcaa ttgcagcatg gtggcccgcc acccggacct gccggcagtc
      241 tagtgcgcgg cttccgccgc acgcttgctc cggggcgccg cccgcaatcc gcgcatgcgc
      301 cagtcgtcac gcgccgcgcc ccggcacgac gcgctatcgt gcctgcctca cctcctcacg
      361 tggaatacgc ccatgcacca ctcccattgg ttgctcgcca ctgccatcgc cgccggcctg
      421 tgcggcacgc cggcctgggc cgccacgccg gcgacgccgg acgcccgcat cggcatcgac
      481 ctggccggca tcgaccacgc ggtgaagccc ggcgacaact tcttcgacta cgccaacggc
      541 aactggctga agaccgcgca gatcccggcc gaccgttcga gcaccggcac cttcctcaag
      601 atcttcgagc tgaccgagca gcacaccgcc gacctgatcc gcaatgccgg cgcgagccac
      661 ccggccgcag gcagcaacgc gcgcaagatc gccgactact acgccgcgta catggacgaa
      721 gccgcgatcg cgcgcaacgg cctcaagccg gtgcagccgg agctggccgc gatcgccgcg
      781 atcaagtcga aggatgagct ggcgcgcatg ctcggcagcc gcctgcgcgc cgacgtcgac
      841 ccgatcaact ccaccaactt ccacaccgaa cacctgttcg gcctgttcgt gacgcaggga
      901 ctcgaagacc cgagccatac catcgcctac ctgctgcagg gcggcctcgc gatgccgagc
      961 cgcgactact acctgtcgac cgatccgcac atggccgagg cgcgcggcaa gtaccacgcc
     1021 tacgtcgtcg ccctgctcaa gcaggccggc atcgcgcagc cggagcacac cgccgacacc
     1081 gtgatcgcgc tggaaaccag gatcgccaag gcgcaggaga ccctgatcga cagccaggac
     1141 gtgcacaagg cgaacaacct gtggacgccc gccgacttcg cgaagaaggc gccgggactg
     1201 gactggacgg cgtacttcaa ggccgccggc ctggccggcc agaaggccat cgacgtgtgg
     1261 cagcccagcg ccaccaccgg cctggccgcg ctggtcggca gcgagccgct ggatgcctgg
     1321 aaggacctgc tcgcgttcca cacgctcgac gccgccgcgc cgctgctgcc gaaggccttc
     1381 gccgacctgc acttcgattt ctacggccat acgctgcagg gcacgcccga gcagcagccg
     1441 cgctggaagc gcgcggtggg cgccaccaac accgatctcg gcgatgccgt cggccagctc
     1501 tacgtggcga aatatttccc cgcctcgtcc aaggccgagg tgcagcaact ggtcaggaac
     1561 ctgatcgccg cgttcaacga gcggctcgac acgctggcgt ggatgacgcc ggcgacgcgc
     1621 gcgaaggcga aggaaaagct ggaaaccctg aaggtcggcg tcggctaccc ggaaacctgg
     1681 cgcaactacg ccgcgctcga catcaaggcc gacgacccgc tcggcaacca ccagcgcgcg
     1741 gtgaagcacg agtacgagca ccagctggcg aaactcggca agccggtgga tcgcggcgag
     1801 tggtggatga cgccgcagac ggtgaatgcg gtgaacctgc cgctgcagaa cgcgctgaac
     1861 ttccccgcgg ccatcctgca ggcgccgttc ttcgacccga aggccgacgc cgccgcgaac
     1921 tacggcgcga tcggcgccat catcggccac gagatcagcc acagcttcga caacaccggc
     1981 gccgacttcg acgcgcaggg caagctggag aactggtgga cgcccgccga cgaggcgcac
     2041 ttcaagagcg ccaccgcgca gctggccaag cagttcgacc agtacgaggc gctgcccggc
     2101 ctgcacgtca acggcgagca gaccctgggc gaggacatcg ccgacgtctc cggcctcacc
     2161 atcgcctacc tcgcctacca caagtcgctc ggcggcaagc cggcgccggt gatcgacggg
     2221 ctgaccggcg accagcgctt cttcctcgcc ttcgcgcaga gctggcgcga gaagaagcgc
     2281 gacgcggcgc tgcgcgcgca
//
LOCUS       DASSVL010000304         5064 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_176896, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000304 DASSVL010000000
VERSION     DASSVL010000304.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 5064)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5064)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5064
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_176896"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1254
                     /gene="secD"
                     /locus_tag="VFM52_05245"
     CDS             <1..1254
                     /gene="secD"
                     /locus_tag="VFM52_05245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007512102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031522 - cell envelope Sec protein
                     transport complex [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecD"
                     /protein_id="HET8764606.1"
                     /translation="RFVLNVMVKPEKLRELARGAITQNLGTLRNRIKALGVSEPLIQQ
                     QGEDHIVVELAGVQDPTEAKKLIGATATLEYRAGIGYPGDPRAVQAAQTGSIPPDANL
                     YYTPDNQGHQPVLVGKRPIVTGDELVDANSGIDQQNGTPSVNVTLNASGAKKMQEFTN
                     ANVGKPMAVVLINTVYETKTVDGKEVRTPKTTYNVINDATIQSPFGKNFSTNGLGSPK
                     EASELALLLKSGALAAPMDIVEEYVIGPSLGQQNIQKGFDSVVLGLALVLLAAAIYYK
                     LFGLVADVALFFNLLILVAVMSMIGVTLTMPGIAGIVLTLGMSIDANVLICERVREEL
                     RNGSTPHAAIHAGYDKAWATILAANVTHLIAALALTAIGTGAIRGFGVTLGIGILTSM
                     FTSVVMTHAITMLIHGRRKLKTLSV"
     gene            1258..2214
                     /gene="secF"
                     /locus_tag="VFM52_05250"
     CDS             1258..2214
                     /gene="secF"
                     /locus_tag="VFM52_05250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007512104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031522 - cell envelope Sec protein
                     transport complex [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecF"
                     /protein_id="HET8764607.1"
                     /translation="MEIFNHNANIHFLRLRWVSITVAIILAVSSVVLIATRGLNYGLD
                     FTGGVSLVVDYTNPVQTNDVRDALEKAGLGTVVVQSVGGSREVNVRLQPNASMKDAKG
                     QVNLDKVSQMVMTALQAVRKDASLKSRSSVSAEVGAELKSDGMVAAVFVIIGIMAYLW
                     MRFERRFAVSAVLTEVHDTLVTLGILALVQREFDMTELASVLAVIGYSINDKVVVFDR
                     IRELFRLARKAEPEEILNRSINSTLSRTIITSLFTGIAMAALYFFGGTAVHGFAITML
                     IGIVVGTLSSIFVASPILLWLGVSKKDLMPMTRENPELARRP"
     gene            complement(2505..3221)
                     /locus_tag="VFM52_05255"
     CDS             complement(2505..3221)
                     /locus_tag="VFM52_05255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020379885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase family protein"
                     /protein_id="HET8764608.1"
                     /translation="MRHALIFAAGRGERMRPLTEHTPKPLLAVGGKPLIVWHLEKLAA
                     CGVRYVVINTAHLAEQFPEALGDGSRWGLRIRYAYEGPTPLETGGGMLHALPMLGTEP
                     FLVVNGDVWCDLDFATLPVAPEGLAHLVMVANPAQHPGGDFALGADGLLHADGTAKLT
                     YSGIGIFRRELLDGWREAVGDAAGADAEPPRFKLRPLLESAMARDALHGSLHRGRWTD
                     VGTPERLTELDRELAAHSRA"
     gene            complement(3206..4255)
                     /locus_tag="VFM52_05260"
     CDS             complement(3206..4255)
                     /locus_tag="VFM52_05260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007512108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphotransferase"
                     /protein_id="HET8764609.1"
                     /translation="MPASDSNRAAARLAWARTALGDATLTLESASSDASFRSYWRTAH
                     AGQSWIVMDSPPACEDPRPWLAISARLAAAGLHVPAVQAQDLEQGFLLIEDLGSRLYL
                     DALNDATADQLYADAMDALLVMQTRVSPDDLPPFNHPVLVSGLEVMPTWFLERHVGHT
                     PSCEEWDVLEAAFDVIIRNALAQPRVFVHRDFHSRNLLVTATNSPGIIDFQGALHGPI
                     TYDLASLLRDAYVVWPRERVEGWVESYRRRLLDAGGLDASVDAARFQRWFDLTGLHRH
                     VRVLGQFYRLWYRDGKPGYLKDVPAVYAYVLDVARRYPELQAFADLIERHADGIDLTL
                     PRPPQATGTGTCATH"
     gene            complement(4347..4748)
                     /locus_tag="VFM52_05265"
     CDS             complement(4347..4748)
                     /locus_tag="VFM52_05265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8764610.1"
                     /translation="MKTEQSAFAKRLLAALEAAGIEASPAVLEKMVPQYGGEAVTAQA
                     VSGWLTGKHLPKQANLQALAHIAGLPPHELQFGTPVHKGVREVNTAWPDYVHGHDRLA
                     FEAFLTLPEARRTLVRELIKILASSTGARSA"
     gene            4824..>5064
                     /locus_tag="VFM52_05270"
     CDS             4824..>5064
                     /locus_tag="VFM52_05270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007510744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8764611.1"
                     /translation="MAIKFPLVVAMPKSLLEQLPEIVARGRQQAEKILEGLEGRHRVG
                     LQTREWVLPSRDTRGSDWIVAANRQAHLDAEGEGGW"
BASE COUNT          869 a         1661 c         1717 g          817 t
ORIGIN      
        1 cgtttcgtgc tcaacgtgat ggtcaagccg gagaagctgc gcgagctggc acgcggcgcg
       61 atcacccaga acctgggcac gctgcgcaac cgcatcaagg cgctgggcgt gtccgagccg
      121 ctgatccagc agcagggcga agaccacatc gtggtcgagc tggccggcgt gcaggacccg
      181 accgaggcga agaagctgat cggcgccacc gcgaccctgg aataccgcgc cggcatcggc
      241 tatcccggcg acccgcgcgc ggtgcaggcg gcgcagaccg gcagcatccc gccggatgcg
      301 aacctctact acacgccgga caaccagggc caccagccgg tgctggtcgg caagcgcccg
      361 atcgtcaccg gtgacgagct ggtggacgcg aactccggca tcgaccagca gaacggcacg
      421 ccgtcggtca acgtcacgct gaatgcctcc ggcgcgaaga agatgcagga gttcaccaac
      481 gccaacgtcg gcaagccgat ggcggtggtg ctgatcaata ccgtgtacga gaccaagacc
      541 gtcgacggca aggaagtgcg cacgccgaag accacgtaca acgtgatcaa cgacgccacc
      601 atccagagcc cgttcggcaa gaacttctcg accaacggcc tgggcagccc gaaggaagcc
      661 tccgagctgg cgctgctgct caagagcggc gcgctcgcgg cgccgatgga tatcgtcgag
      721 gaatacgtga tcggcccgag cctcggccag cagaacatcc agaagggctt cgactcggtg
      781 gtgctcggcc tcgcgctggt gctgcttgcc gcggcgatct actacaagct gttcggcctg
      841 gtggccgacg tggcgttgtt cttcaacctg ctgatcctgg tcgcggtgat gtcgatgatc
      901 ggcgtcacgc tgaccatgcc cggcatcgcc ggcatcgtgc tcacgctcgg catgtcgatc
      961 gacgccaacg tgctgatctg cgaacgcgtg cgcgaggaac tgcgcaacgg ctcgacaccg
     1021 catgcggcga tccacgccgg ttacgacaag gcgtgggcga cgattctcgc tgcgaacgtc
     1081 acccacctga tcgcggcgct ggcactgacc gcgatcggca ccggcgcgat ccgcggcttc
     1141 ggcgtcacgc tgggcatcgg catcctgacc tcgatgttca cctcggtggt gatgacccac
     1201 gcgatcacga tgctgatcca cggccgtcgc aagctgaaaa ccctttcggt gtaagccatg
     1261 gaaatcttca atcacaacgc gaacatccat ttcctgcggc tgcgctgggt cagcatcact
     1321 gtcgcgatca tcctcgcggt gtcgtcggtc gtgctgatcg cgacgcgcgg cctgaactac
     1381 ggcctggatt tcaccggcgg cgtgtcgctg gtggtggatt acaccaaccc ggtgcagacc
     1441 aacgacgtgc gcgacgcgct ggagaaggcc gggcttggca ccgtcgtggt gcagagcgtg
     1501 ggcggcagcc gcgaggtcaa cgtgcgcctg cagccgaacg cgtcgatgaa ggacgcgaag
     1561 ggccaggtca acctcgacaa ggtctcgcag atggtgatga ccgcgctcca ggcggtgcgc
     1621 aaggacgcct cgctcaagag ccgctcgtcg gtcagcgccg aggtcggcgc cgagctgaag
     1681 agcgacggca tggttgccgc ggtgttcgtc atcatcggca tcatggccta cctgtggatg
     1741 cgcttcgagc gccgtttcgc ggtgtccgcg gtgctcaccg aggtccacga cacgctggtg
     1801 acgctcggca ttctcgccct ggtgcagcgc gagttcgaca tgaccgagct ggcctcggtg
     1861 ctggcggtga tcggttattc gatcaacgac aaggtggtgg tgttcgaccg catccgcgag
     1921 ctgttccgcc tcgcgcgcaa ggccgagccc gaggaaatcc tcaaccgctc gatcaacagc
     1981 acgctgagcc gaaccatcat cacctcgttg ttcactggca tcgccatggc ggcgctgtac
     2041 ttcttcggcg gcaccgcagt gcacggcttc gcgatcacca tgctgatcgg catcgtcgtc
     2101 ggcacgctgt cctcgatctt cgtcgccagc ccgatcctgc tgtggctcgg cgtgtcgaag
     2161 aaggacctga tgccgatgac ccgcgagaat cccgagctcg cccgccggcc gtaagcacat
     2221 cgcccgcatt gcgggcaggc cgatttgtcc catttcgatc ccccgcttgc ggaggatcgt
     2281 cgtatcgggc gccacggcgg ccttcgtgcg gccgcgcgat gaacaagctc tgcatcggcg
     2341 ggcggcggag ggcaggcggg ctcctgcaag atatgtctct gccctgatgc cggccgaaag
     2401 ccatcgcacg caagtggcct tctgcccctg caggtcgggc gtcagcccga cgagtcttcc
     2461 gccaagagcc cagtcgggac aagtcccggc ccgcaaggtg gttcctatgc gcgcgagtgc
     2521 gctgccagct cccggtccaa ctccgtcaac cgctccggcg tgcccacatc cgtccagcgg
     2581 ccgcgatgta gcgaaccgtg cagggcatcg cgcgccatcg cggattccag cagggggcgc
     2641 agcttgaagc gtggcggttc ggcgtccgcg ccggcggcat cgccaacggc ttcgcgccag
     2701 ccatccagca gctcgcggcg gaatatgccg ataccgctgt aggtgagctt cgctgtgcca
     2761 tccgcgtgca gcaggccgtc ggcacccagc gcaaagtcac cgccagggtg ctgcgccggg
     2821 ttggccacca tcaccaggtg ggcgagtcct tccggtgcca cgggcagcgt ggcgaaatcc
     2881 aggtcgcacc acacgtcccc attgacgacg aggaacggtt cggtgccgag catcggcagc
     2941 gcgtgcagca tgccgccgcc ggtttcgagc ggcgttggac cttcataggc atagcggatg
     3001 cgcaggcccc agcgtgagcc gtcgcccaga gcctcgggaa actgttcggc gagatgcgcg
     3061 gtgttgatca cgacgtagcg cacgccgcac gcggcaagct tttccaggtg ccacacgatc
     3121 agcggcttgc caccgacggc gagcagcggc ttcggcgtgt gctcggtcag cgggcgcatg
     3181 cgctcgccgc ggccggcggc gaagatcagt gcgtggcgca cgtgccggtt cccgtggctt
     3241 gcggtgggcg cggaagcgtc aggtcgatgc catcggcgtg gcgctcgatg agatcggcga
     3301 acgcctgcag ttcggggtag cggcgcgcca cgtcgagcac gtaggcgtag accgccggca
     3361 cgtccttgag gtagcccggc ttgccgtcgc ggtaccacag ccggtagaac tggccgagca
     3421 cgcgcacgtg gcggtgcagg ccggtgaggt cgaaccagcg ctggaagcgc gccgcgtcca
     3481 cgctggcgtc gagcccaccc gcgtcgagca ggcgtcggcg gtaggactcc acccagcctt
     3541 ccacccgctc gcgtggccac acgacgtacg cgtcgcgcag cagcgaggcg aggtcgtagg
     3601 tgatcggtcc gtgcagcgcg ccctggaaat cgatgatgcc tgggctgttc gtggcggtca
     3661 ccagcaggtt gcggctgtgg aagtcgcggt gcacgaacac ccgcggctgc gccaacgcat
     3721 tgcggatgat cacgtcgaac gcggcttcca gcacatccca ctcttcgcaa ctgggcgtgt
     3781 ggccaacgtg gcgttcgagg aaccacgtcg gcatcacttc cagcccgctc accagcaccg
     3841 ggtgattgaa cggcggcaga tcgtcggggc tcacccgcgt ctgcatcacc agcaacgcat
     3901 ccatcgcgtc ggcgtagagc tgatcggcag tcgcgtcgtt caaggcgtcg agatacagcc
     3961 gcgagccgag atcctcgatc agcaggaaac cctgttcgag atcctgtgcc tgcacggccg
     4021 gcacatgcag cccggcggca gcgagccgcg cactgatcgc cagccacggg cgcgggtctt
     4081 cgcacgccgg cggcgaatcc atcacgatcc agctttgccc cgcgtgggcg gtgcgccagt
     4141 agctgcgaaa gctggcatcg gacgaggcgc tttccagcgt cagcgtggca tcgccgaggg
     4201 cggtgcgggc ccacgcgagg cgggcggcgg cgcggtttga atcggaagca ggcatggtgc
     4261 gcgggaagcg ggagacaccg cgcagcttag cgacgccacg acgaacgtgc gaggcgccac
     4321 cacacgcctt gcgtacacgc aggcaatcag gccgaacgtg cgcccgtcga actggcaagt
     4381 attttgatca gctcgcgcac cagcgtgcgt cgggcttccg gcaaggtgag aaaggcctcg
     4441 aaggcgaggc ggtcgtggcc atgtacgtaa tctggccacg cggtgttgac ctcccgcacg
     4501 cccttgtgaa ccggggtgcc gaactgcagc tcgtgcggcg ggagccccgc gatgtgggcc
     4561 agcgcctgca ggttcgcctg cttgggcagg tgcttgccgg tgagccagcc ggaaaccgcc
     4621 tgcgccgtca cggcttcgcc gccgtactgc ggaaccatct tctccagcac ggcaggactt
     4681 gcctcgatgc cggccgcctc gagtgcggcg agcaggcgct tggcgaaggc agactgttcg
     4741 gtcttcatgg tgcatgacca taggcggcac cttcgtgggc aaaggaaact agtgctttat
     4801 aaaatctgaa agttttgatt tcattggcga tcaagttccc gttggttgtc gccatgccca
     4861 agtcgctgct tgaacagttg cccgagatcg tcgcccgcgg gcgccagcag gcggagaaga
     4921 tcctggaggg cctggagggg cggcaccgtg tgggcctgca gacgcgtgag tgggtgctgc
     4981 cgtcgcggga tacccgcggc agcgactgga ttgtcgccgc gaaccggcag gcgcatctgg
     5041 atgcggaagg cgagggcggc tgga
//
LOCUS       DASSVL010000305         3689 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1137124,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000305 DASSVL010000000
VERSION     DASSVL010000305.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3689)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3689)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3689
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1137124"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1765)
                     /gene="pnp"
                     /locus_tag="VFM52_05275"
     CDS             complement(<1..1765)
                     /gene="pnp"
                     /locus_tag="VFM52_05275"
                     /EC_number="2.7.7.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008435592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004654 - polyribonucleotide
                     nucleotidyltransferase activity [Evidence IEA];
                     GO_process: GO:0006402 - mRNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyribonucleotide nucleotidyltransferase"
                     /protein_id="HET8764612.1"
                     /translation="MAKVTKSFQYGKHEVTLETGEIARQASGAVMVSMGGTVVLVTVV
                     AAAKAKEGQDFFPLTVDYVEKFYSAGRIPGGFFKREGRPTEKETLTSRLIDRPIRPLF
                     PDAFKNEVQVIAQVVSLNPEVESDIPAMLGASAALSLSGIPFKGPIAAARVGYINGQY
                     VLNPETAELPNSKLDLVVAGTAGAVLMVESEAQLLSEEVMLGAVIFGHREMQAAINAI
                     NAFVAEAGRKPFKWVEPTRNEALFGAIKAALGTRLGEAFHIKDKLERRDAIAALQSEV
                     KATIAAQAEAGGWSDGAISDAFEEIEYHTLRDGVLKTKTRIDGRELDQVRPITARVGV
                     LPRTHGSALFTRGETQALVTVTLGTTRDAQIIDAPAGESKDPFLFHYNFPPFSVGETG
                     RFGSPKRREIGHGRLAKRGVQAVKPSIEAFPYVLRVVSEITESNGSSSMASVCGSSLA
                     MMDAGVPLTAPVAGIAMGLVKEGNDYVVLSDIMGDEDHLGDMDFKVAGSAEGVSALQM
                     DIKIDGITEEIMRTALAQAHKGRMHILGEKAKAISTPRGEMSEYAPRLLTIKIHPDKI
                     REVIGKGGATIRSITEETGTTI"
     gene            complement(1890..2159)
                     /gene="rpsO"
                     /locus_tag="VFM52_05280"
     CDS             complement(1890..2159)
                     /gene="rpsO"
                     /locus_tag="VFM52_05280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004933502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S15"
                     /protein_id="HET8764613.1"
                     /translation="MSLTVEQTGKIITDFGRKPNDTGSTEVQVALLSARIDHLTEHFK
                     THKQDHHSRRGLLKLVNRRKSLLGYLKGRDLARYQSLIERLGLRR"
     gene            complement(2321..3250)
                     /gene="truB"
                     /locus_tag="VFM52_05285"
     CDS             complement(2321..3250)
                     /gene="truB"
                     /locus_tag="VFM52_05285"
                     /EC_number="5.4.99.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008211790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004730 - pseudouridylate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(55) synthase TruB"
                     /protein_id="HET8764614.1"
                     /translation="MTRRHHRTRFHWRALHGIVLLDKPAGLSSNQALQQVRQLLRAAK
                     GGHAGALDPIATGLLPLCFGEATKLAGSLLGGRKAYRATCRLGITTTTADSEGEVLRT
                     RPVPSLDAAAVETALAALRGRITQVPPAHSALKQGGERLYLKARRGELVDVPPREVDV
                     YRLDLLECVGDTLSFEVECGSGTYVRSLAADLGERLGCGAHLIALRRLWVEPFAAPRM
                     VTLPELEAAAAAGDTALLAWLLPTEAGLGDCPRLVLDAMQCEVIGSGGSIVVDGRHGL
                     HAALDERGVLRALLDFDAACCSRIVRGFNLPCS"
     gene            complement(3259..3624)
                     /gene="rbfA"
                     /locus_tag="VFM52_05290"
     CDS             complement(3259..3624)
                     /gene="rbfA"
                     /locus_tag="VFM52_05290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007805227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0019843 - rRNA binding [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosome-binding factor RbfA"
                     /protein_id="HET8764615.1"
                     /translation="MPSRDFKRTDRVGAELRRELGLLVHAAVRDHGLPSCSVSDVEVT
                     RDLDYAAVWVTALLPDQSVAAMKALNELAPEFRRALSRSMRLRRVPELKFKYDDSVDK
                     GERIDALLRETRSPPARES"
BASE COUNT          584 a         1249 c         1238 g          618 t
ORIGIN      
        1 cgatggtggt gccggtttcc tcggtgatcg agcggatggt cgcgccaccc ttgccgatca
       61 cttcgcggat cttgtccgga tggatcttga tggtcaggag ccgcggcgcg tactcgctca
      121 tttcgccgcg cggcgtcgag atcgccttcg ccttctcgcc gaggatgtgc atgcggccct
      181 tgtgcgcctg tgccagcgca gtgcgcatga tttcctcggt gatgccgtcg atcttgatgt
      241 ccatctgcag cgcggacacg ccctcggcgc tgccggccac cttgaaatcc atgtcgccga
      301 ggtggtcttc gtcacccatg atgtcgctca gcacgacgta gtcgttgcct tccttcacga
      361 ggcccatcgc gatgcccgcg accggcgccg tcagcggcac gcccgcgtcc atcatcgcga
      421 gcgacgaacc gcacaccgac gccatcgacg aggaaccgtt cgactcggtg atttccgaca
      481 ccacgcgcag cacgtacgga aatgcctcga tcgacggctt gaccgcctgc acgccgcgct
      541 tggcgaggcg gccgtggccg atctcgcgac gcttcggcga gccgaagcgg ccagtctcgc
      601 ccaccgagaa cggcgggaag ttgtagtgga acaggaacgg atccttggac tcgccggccg
      661 gcgcgtcgat gatctgcgcg tcgcgcgtgg tgcccagggt gacggtgacc agcgcctgcg
      721 tctcgccgcg ggtgaacagc gccgagccgt gggtgcgcgg cagcacgccg acgcgcgccg
      781 tgatcgggcg cacctggtcg agctcgcggc cgtcgatgcg ggtcttggtc ttcagcacgc
      841 cgtcgcgcag cgtgtggtac tcgatctctt cgaacgcgtc gctgatcgcg ccgtcgctcc
      901 agccgccggc ctcggcctgc gccgcgatgg tggccttgac ctcgctctgc aacgcggcga
      961 tcgcgtcgcg gcgctcgagc ttgtccttga tgtggaacgc ctcgcccaga cgggtgccga
     1021 gcgcggcctt gatcgcaccg aacagcgctt cgttgcgcgt gggctcgacc cacttgaacg
     1081 gcttgcggcc ggcctcggcc acgaacgcgt tgatcgcgtt gatcgccgcc tgcatctcgc
     1141 ggtggccgaa gatcaccgcg ccgagcatca cttcctcgga cagcagctgc gcctcggact
     1201 ccaccatcag caccgcgccg gcggtgccgg cgacgacgag gtcgagcttg gagttcggca
     1261 gctcggcggt ttccgggttc agcacgtact ggccgttgat gtagccgacg cgcgccgcgg
     1321 cgatcggccc cttgaacggg atgccggaga gcgacagcgc cgcggaggcg ccgagcatcg
     1381 ccgggatgtc gctttccact tccgggttga gcgacacgac ctgggcgatc acctgcactt
     1441 cgttcttgaa cgcgtccggg aacagcgggc ggatcgggcg atcgatcagg cgcgaggtca
     1501 gcgtctcctt ctcggtcgga cggccctcgc gcttgaagaa gccgcccggg atgcggccag
     1561 cggagtagaa cttctcgacg tagtcgacgg tgagcgggaa gaaatcctgc ccttccttcg
     1621 ccttggccgc ggccaccacg gtgaccagca ccaccgtacc gcccatgctg accatcactg
     1681 cgccagatgc ctggcgggcg atttcgcccg tctccagcgt gacttcgtgt ttaccgtact
     1741 ggaaagactt ggttactttc gccatgttga tttcccgatt ctgaaaaagg cggcgccggc
     1801 gccggtgcct ggtgtgcgtt cacgtgcgaa cgccccgaca aaactcatgc ggccggcaag
     1861 ccggccgcgt atcacgttgc gagcgtcggt cagcgacgca ggccgaggcg ctcgatcagg
     1921 ctctgatagc gcgccagatc gcggcccttc agataaccga gcaggctctt gcggcggttg
     1981 accagcttga gcaggccgcg gcgcgagtgg tgatcctgct tgtgcgtctt gaagtgctcg
     2041 gtgaggtggt cgatgcgggc cgacagcagc gcaacctgca cttcggtcga gccggtatcg
     2101 ttcggcttgc ggccaaaatc ggtgatgatc ttgccggtct gttctacggt aagagacatg
     2161 tggagtaccc gtttccttga aaaggcgatg cgaagcttgc gtttgcgcag tcagggacga
     2221 cgcaagcgca agcttcgcct tggttgatga aagtgcagga ataacttgct cattgtaccg
     2281 ttgacctccg cgctgcaaca agggcgggaa gcggcgtccg tcagctgcac ggcaggttga
     2341 aaccgcgcac gatgcggctg cagcacgccg catcgaaatc cagcagcgcg cgcagcacgc
     2401 cgcgctcatc cagcgccgca tgcaggccgt gccggccgtc gacgacgatg ctgccgccgc
     2461 tgccgatcac ttcgcactgc atcgcatcca gcacgagccg ggggcaatcc cccagccccg
     2521 cttcggtcgg cagcagccag gccagcagcg cggtgtcgcc cgcggcagcc gcggcttcca
     2581 gctcggggag cgtcaccatg cgcggggcgg cgaacggttc gacccacagc cggcgcaacg
     2641 cgatcaggtg cgcgccacag cccaggcgct cgccgagatc ggccgccagc gagcgcacgt
     2701 aggtgcccga gccgcattcg acctcgaaac tcagcgtgtc gccgacgcac tccagcaggt
     2761 ccagccggta cacgtcgacc tcgcgcggcg gcacgtcgac cagctcgccg cggcgcgcct
     2821 tgaggtacag gcgttccccg ccctgcttca gcgccgagtg ggctggtggc acctgggtga
     2881 tcctgccgcg cagcgccgcc agcgcggttt cgacggccgc cgcgtccagg ctgggaaccg
     2941 gacgggtgcg cagcacttca ccttcggagt cggcggtggt cgtggtgatc ccgagccggc
     3001 aggtggcccg gtacgccttg cggccgccga gcaggctgcc ggccagcttg gtggcctcgc
     3061 cgaaacacag cggtaggagg ccggtggcga tcggatcgag cgcaccggca tgaccgcctt
     3121 tcgcggcacg cagcaactgg cgcacctgct gcaaggcctg gttggaactg aggccggcgg
     3181 gcttgtcgag caggacgatg ccgtgcagcg cacgccagtg gaagcgcgtc cggtgatggc
     3241 gccgcgtcat gggcccgcct acgattcgcg cgcgggcggc gaacgggttt cgcgcagcag
     3301 ggcatcgata cgctcgccct tgtcgaccga gtcgtcgtac ttgaacttca actcgggcac
     3361 ccggcgcagg cgcatgctgc gcgacagcgc acgccggaac tcgggcgcca gctcgttgag
     3421 cgctttcatc gcggcgacgg actgatctgg cagcagcgca gtcacccaca ccgcggcgta
     3481 atccagatcc cgcgtcacct cgacatccga cacgctgcac gatggcaggc cgtggtcgcg
     3541 caccgccgca tgcaccagca ggcccagctc acgacggagc tcggcgccta cacggtcggt
     3601 acgtttgaag tcgcgggagg gcatcagaaa actccgaaga caaaatccat tctcccttcg
     3661 ggagaaggtg ccccaaaggg gcggatgag
//
LOCUS       DASSVL010000306         3359 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_868424, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000306 DASSVL010000000
VERSION     DASSVL010000306.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3359)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3359)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3359
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_868424"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            137..226
                     /locus_tag="VFM52_05295"
     tRNA            137..226
                     /locus_tag="VFM52_05295"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:171..173,aa:Ser,seq:cga)
     gene            281..1252
                     /locus_tag="VFM52_05300"
     CDS             281..1252
                     /locus_tag="VFM52_05300"
                     /inference="COORDINATES: protein motif:HMM:NF025053.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PP2C family serine/threonine-protein
                     phosphatase"
                     /protein_id="HET8764616.1"
                     /translation="MDEATRFDKFVWNEFGQPKAGPGARKRVGVSPMDGANTNSSGTN
                     LDSGRLAPERGARRGEPHGWGEQSHPQPLFSTAAFAPFPFIRHASSMIEFGHGTHAGL
                     HRIRNEDTYYADAALGLFLVADGMGGHLHGEVAAALVRDTVVELVSRGHSLAEAIHGA
                     DDGLRARARVCGDAHPMGSTLAALWLQGPHFDAAWVGSSRIYAVAHEFKPLEHDRKLA
                     RTLADTGQLAGIAASRPTGHGGLTQALGITAPAELHIGIAHGEIQAGNGFLLCTDGLS
                     EELATDAIAHVALRRDLAAQECIDQLLLDALAHGGHDNLTAVLIRTS"
     gene            complement(1253..1993)
                     /gene="dnaQ"
                     /locus_tag="VFM52_05305"
     CDS             complement(1253..1993)
                     /gene="dnaQ"
                     /locus_tag="VFM52_05305"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017355631.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit epsilon"
                     /protein_id="HET8764617.1"
                     /translation="MRQVVLDTETTGLEVRQGHRLVEIACVELLERRVTGQYWQTYLN
                     PERAMDEGASQVTGYRDDFLRDKPLFADQVDAFLAFVDGAELVIHNASFDVGFIDAEL
                     ARLGARYGRIGDHCSVLDTLAMARERYPGQRNSLDALCKRLGVDNSRRDLHGGLIDAQ
                     LLADVYLAMTSGQVALDLGFEADPAEAATVTSATTVLRARPRVLLATEAECAAHEHRL
                     DALDKKVGTCVWRRGEDPADAPTAAMPG"
     gene            complement(1990..2439)
                     /gene="rnhA"
                     /locus_tag="VFM52_05310"
     CDS             complement(1990..2439)
                     /gene="rnhA"
                     /locus_tag="VFM52_05310"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007805291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004523 - RNA-DNA hybrid ribonuclease
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HI"
                     /protein_id="HET8764618.1"
                     /translation="MTTEEVEAFTDGACLGNPGPGGWAALLRAKGHERLLAGGEAATT
                     NNRMELLAAIHALEALSRTCGVRLTTDSRYVMQGVEQWLPKWRANGWRTADKKPVKNR
                     DLWERLSAATARHQVRWQWVKAHNGHAENERVDQAARAQAEQQKGQA"
     gene            complement(2452..3126)
                     /locus_tag="VFM52_05315"
     CDS             complement(2452..3126)
                     /locus_tag="VFM52_05315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007511247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HET8764619.1"
                     /translation="MALQGSDDIHASAALRWSRGQQRRTLVPLLQRESARRALHVGVA
                     DDDAAPALLGVMWTRLWLTGGDYHGDLRGHADAPLPFVDEAFDLVWLQHALEPAPHAA
                     AMLGEACRVLAAGGVLAITAVHPLGGWAPWFRWRARHQHQSMQWPWRLRETLLAAGLD
                     TEGVRRFGPFWPRGDGGDSHCGGVFLLLARKRRLLATPIPLRPLPVGAPANARWSPGT
                     HRQTLP"
BASE COUNT          548 a         1178 c         1097 g          536 t
ORIGIN      
        1 catgggttcc gtgtccgagc tcgatcatgg ggctattgtc agggcaagct gtgcagcatg
       61 ccgcaagcca aggttgttgt cacggttccc ttgctcgcgt atgattcgcg gctcgcatgc
      121 gcccatgcac ccgaccggag aggtggcaga gtggtcgaat gtacctgact cgaaatcagg
      181 cgtacgtgta agcgtaccgt gggttcgaat cccaccctct ccgccagaca caaaaacgcc
      241 ccctcgcggg ggcgtttttg tgtctggcgg agagggtggt gtggacgaag ccacccggtt
      301 cgacaaattc gtctggaacg aatttggaca gccgaaggct ggccccggag cgcgcaagcg
      361 cgtaggggtg agccccatgg atggggcgaa cacaaattcg tccggaacga atttggacag
      421 cggcaggctg gccccggagc gcggagcgcg taggggtgag ccccatggat ggggcgaaca
      481 atcccaccct caaccgcttt tcagcaccgc cgcttttgca ccctttccct tcatccgcca
      541 tgcttcttcc atgattgagt tcggacacgg cacgcacgcg ggcctgcatc gcattcgcaa
      601 cgaggacacc tactacgccg acgccgcgtt ggggctgttt ctcgtcgccg atggcatggg
      661 cggacacctg cacggcgagg tggcggcggc gctggtgcgc gacaccgtgg tcgagctggt
      721 aagccgcggg cacagcctgg cggaagcgat ccacggcgcc gacgatggcc tgcgggcgcg
      781 tgcccgcgtg tgcggcgacg cccaccccat gggcagcacg ctggcggcac tgtggctgca
      841 gggcccacac ttcgatgctg cgtgggtcgg cagcagccgc atctacgcgg tggcgcacga
      901 gttcaagcca ctggaacacg atcgcaagct ggcccggacc ctggccgaca cgggacagct
      961 ggccggcatc gccgcttcgc gaccgaccgg ccacggcggc ctgacccagg cgctcggcat
     1021 caccgcaccg gcggaattgc acatcggcat cgcccatggc gagattcagg ccggcaacgg
     1081 tttcctgctg tgcaccgatg gcctgagcga ggaactggcc accgacgcga tcgcgcatgt
     1141 cgccttgcgc agggacctcg ccgcgcagga atgcatcgac cagttgttgc tcgacgccct
     1201 ggcgcacggc gggcacgaca acctcaccgc ggtcctcatc cgcaccagct gatcagcctg
     1261 gcatcgcggc ggtcggcgcg tccgccgggt cctcgccacg ccgccacacg caggtgccga
     1321 ctttcttgtc cagtgcgtcg aggcggtgct cgtgtgcagc acattccgcc tcggtcgcga
     1381 gcagcacccg cgggcgcgcc ctgagcactg tcgtggcact ggtcacggtc gccgcctcgg
     1441 cgggatcggc ttcgaacccg agatccaggg ctacctgccc cgaggtcatc gccagataga
     1501 cgtccgccag caattgcgcg tcgatcaagc cgccatgcag gtcgcgccgc gagttgtcga
     1561 caccgaggcg cttgcacagc gcatccaggc tgttgcgctg gccgggatag cgctcgcgcg
     1621 ccatcgccag cgtgtcgagc acgctgcagt ggtcgccgat gcgcccgtag cgcgcgccga
     1681 gccgcgccaa ctcggcgtcg atgaagccga cgtcgaaact cgcgttgtgg atcaccagct
     1741 cggcgccgtc gacgaaggca aggaacgcgt cgacctggtc ggcaaacagc ggcttgtcgc
     1801 gcaggaagtc gtcgcggtag ccggtcacct ggcttgcgcc ctcatccatg gcgcgctcgg
     1861 gattcaggta ggtctgccag tactgcccgg tgacgcggcg ttcgagcagc tcgacgcagg
     1921 caatttccac caaccggtgg ccctgacgga cttcgagccc ggtcgtctcg gtatccagca
     1981 ccacctgcct catgcctgcc ccttctgttg ttcggcctgc gcacgcgcgg cctgatcgac
     2041 gcgttcgttc tcggcgtggc cgttgtgggc cttgacccat tgccagcgta cctggtggcg
     2101 cgcggtggcc gcggacaacc gctcccacag atcgcgattc ttcaccggct tcttgtcggc
     2161 cgtacgccag ccattggcgc gccatttcgg caaccactgc tcaacgccct gcatcacgta
     2221 gcgcgaatcg gtcgtcaacc gcacgccaca ggtgcggctg agcgcttcca gggcatggat
     2281 cgccgcgagc aactccatcc ggttgttggt ggttgccgct tcgcccccgg cgagcagccg
     2341 ttcgtgccct ttcgcgcgca gcaaggcggc ccagccgcca gggccgggat tgcccaggca
     2401 tgcgccatcg gtgaatgctt ccacttcttc ggtcgtcacg catcgtctct ttcaaggaag
     2461 ggtttgccgg tgcgtccccg gcgaccatcg tgcattggcc ggcgcgccga ccggcagcgg
     2521 acgcaaggga atcggcgtgg ccaggagccg gcgcttgcgt gcgagcaaca ggaagactcc
     2581 gccgcaatgg ctgtcaccac catctccgcg cggccagaac gggccgaaac ggcgcacgcc
     2641 ctcggtatcc agcccggcgg ccagcagcgt ctcgcgcagc cgccacggcc actgcatgga
     2701 ttgatgctgg tggcgggcgc gccagcggaa ccacggcgcc cagccgccga gcggatgcac
     2761 ggccgtgatc gccagcacgc ccccggcggc cagcacccgg cacgcctcgc ccagcatcgc
     2821 ggccgcatgc ggcgccggct ccagcgcgtg ctgcagccag acgagatcga acgcctcatc
     2881 gacgaacggc aacggcgcat cggcgtgccc gcgcaggtcg ccgtgatagt cgccgccagt
     2941 cagccacagg cgcgtccaca tgacaccgag caaggcggga gcggcgtcgt catcggccac
     3001 gccgacatgc agcgcgcggc gcgccgattc gcgctgcagc agcggcacca gcgtccgccg
     3061 ctgctgtccg cgcgaccatc gcaacgcggc actcgcgtga atgtcgtcac tgccttgaag
     3121 cgccatgccg tcaatccggc gccaccgacg ccagtctccg ctctgcttcc gaatccaacc
     3181 ggaagtgtag ccgcagcacg cccgcggcga cgcctcgtgg tcagcgtgac gcgatcggca
     3241 aacgctgaat gaccgggcgc catttaacca gactctaacg agtgggacgg ctgacctgct
     3301 tatagtcggc gggttggctc atcaacgccg ccttcacccc aggcgtgaag caaccgatg
//
LOCUS       DASSVL010000307         2381 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_882955, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000307 DASSVL010000000
VERSION     DASSVL010000307.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2381)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2381)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2381
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_882955"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..583)
                     /locus_tag="VFM52_05320"
     CDS             complement(<1..583)
                     /locus_tag="VFM52_05320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015446453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase-like regulatory
                     domain-containing protein"
                     /protein_id="HET8764620.1"
                     /translation="MNQRYQSGVGTTHWRRTALAVALGLSFSGLALAQSTVGSIFGQA
                     PAASGETVVVSNASGFSREVPVDSTGRYRVDHLPVGTYTVTLKQNGTVVSTHENAYVT
                     TGGAAGIDFASSAAASSNAKELSSVTVTANALPAIDVTNVNSSTVITSADLKRLPVAH
                     SAEAIALLSPNTTSGSGFFRGTAGQSLVSFGGSS"
     gene            953..>2381
                     /locus_tag="VFM52_05325"
     CDS             953..>2381
                     /locus_tag="VFM52_05325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008216481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfotransferase"
                     /protein_id="HET8764621.1"
                     /translation="MSQAPSPSSPSAASFSAAQRKHTADVAAVEQMLANAPDDTAALI
                     ELASLRFQAGQFRASVPPLLHAARHLPRNAPLIVTLVQRLIACGEVVPARACLDLLAH
                     APEAPTELLATQAHLGFTLGEIPAALALMERAIQRGADSPDVHYLHAMLLQFSGHLEA
                     AAGVLERCLARWPGFGDAAVVLANLRKQTPAANRLSALREQLRQMPSDDDHPDRAFVR
                     AEFEYACFKTLDDLGEPDEAWPALARCNALMHRLNPYDADGEAAVVRALETMPLATQP
                     DAPPSPGPCPIFVVGMPRSGTTLLDRILSSHPQVESAGEIIDFWRQLHWAADVTPDKT
                     RSLLRIIGRSATLDYRELGARYLRQTQWRAHGKRWYVDKLPANIQMVAFIRRALPHAP
                     ILHMVRDPMDTCFSNYKAMFGNISPYSYDFDALVHYYRGYRQLVRHWHAALPGAMLDV
                     DYADLVRDTAAMVPRILAYCGLPPDD"
BASE COUNT          398 a          829 c          754 g          400 t
ORIGIN      
        1 cgctcgaacc gccgaacgac accagcgact ggccagcggt acccctgaag aaaccgctgc
       61 ccgacgtggt gttcggcgac agcagcgcga tggcctcggc gctgtgtgcc accggcagcc
      121 gcttcaggtc ggcggaggtg atgacggtgc tcgagttgac gttggtgacg tcgatcgcgg
      181 gcaacgcgtt ggcggtcacc gtcaccgagg acagttcctt tgcgttcgag ctcgccgcag
      241 cgctgctggc gaagtcgatg cccgcagcac cgccggtcgt gacgtaggca ttctcgtgcg
      301 tgctgacgac cgtgccgttc tgcttcaagg taacggtgta ggtgcctact ggcaggtggt
      361 cgacacggta gcggcccgtg ctgtccaccg gcacttcacg cgaaaagccg gaagcattgc
      421 tgaccaccac ggtctcgccg gacgcggctg gtgcctggcc gaagatgctg ccgacggtgc
      481 tctgtgccag cgccaagccg ctgaagctca aaccgagcgc aaccgccaat gcagtacgcc
      541 gccagtgggt ggtgccgacc cccgattggt atcgctgatt catttggtat ctccccagtt
      601 catacaagtg acgcgcgcga cgaccgtgtc ggcaccacgc caaaccggcc atcagccaga
      661 gtgcttccgc aggcgttacc tcaagaactt gcgaaataac ccgggttgtg atggacctcg
      721 ccgtagaaag taagcctagg aaaatgtcgt agtcaacaaa aacttcatga ttgccgttgg
      781 tgtgcgttaa caatcgcgag tccctgctgg tctccgaggc caccatcacg ggcgtcaacg
      841 accgggcgtg gtccacgtcc aacgtgcggt ggaggcgcgc cagagggcca tctgacgccc
      901 cggcagggca gcgattgagt ctgcaccgtc agccgcccta ccatctctgg ccatgagcca
      961 ggcgccgtct ccatcaagtc cttccgccgc atctttcagc gcggcgcaac gcaagcacac
     1021 cgcggacgtt gcggcggtgg aacagatgct tgcgaacgca ccggatgaca cggcggcgct
     1081 gatcgagctg gcgagcctgc gattccaggc cgggcagttc cgcgcctcgg tgccgccgct
     1141 gctgcatgcg gcacggcacc tgccgcgcaa tgcgccgctg atcgtgacgc tggtgcagcg
     1201 cctcattgcc tgcggcgagg tcgttccggc acgcgcttgc ctcgacctgc tggcccatgc
     1261 gcccgaggcg cctacggaac tgctggccac ccaggcccac ctgggcttca cgctgggcga
     1321 gatcccggcg gcgcttgccc tcatggaacg cgccatccag cgcggtgcgg attcgcccga
     1381 cgtccactac ctgcacgcca tgctcctgca gttcagcgga cacctggagg ccgccgccgg
     1441 cgtgctcgaa cggtgtctcg cgcggtggcc cggcttcggc gatgcggccg tcgtgctggc
     1501 caacctgcgc aagcagacac cagcggcaaa ccggctgtcg gccctgcgcg agcagttgcg
     1561 ccagatgccc tcggatgacg atcacccgga tcgcgccttc gtccgcgccg agttcgaata
     1621 cgcctgcttc aagacgctcg acgacctcgg cgagcccgat gaggcatggc cggcactcgc
     1681 gcgctgcaat gcgctgatgc atcgcctcaa tccttatgac gccgacggcg aggccgcagt
     1741 ggtccgcgcg ctggaaacca tgccgctcgc cacgcagccg gatgcgccgc cgtcgcccgg
     1801 cccgtgcccg atcttcgtcg tcggcatgcc acgctcgggt accaccttgc tggaccgcat
     1861 cctgtcgagt catccgcagg tggaatccgc gggcgaaatc atcgacttct ggcgccagtt
     1921 gcactgggcg gccgacgtca cccccgacaa gacgcgcagc ctgttgcgga tcatcgggcg
     1981 cagcgcaacc ctcgactacc gcgaactggg cgcgcgctac ctgcgccaga cccaatggcg
     2041 cgcccacggc aagcgctggt acgtggacaa gctgccggcg aacatccaga tggtggcgtt
     2101 catccgtcgc gcgctgccgc atgcgccgat cctgcacatg gtgcgcgacc cgatggacac
     2161 gtgcttttcc aattacaagg caatgttcgg caacatctcg ccctacagct acgacttcga
     2221 cgcgctggtc cactattacc gcggttatcg ccagttggtg cgccattggc acgccgccct
     2281 gccgggcgcg atgctcgacg tcgactacgc ggacctggtg cgggacaccg ccgccatggt
     2341 gccccggatc ctggcgtact gcgggctgcc gcccgacgac g
//
LOCUS       DASSVL010000308         3652 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1334839,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000308 DASSVL010000000
VERSION     DASSVL010000308.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3652)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3652)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3652
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1334839"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..192
                     /locus_tag="VFM52_05330"
     CDS             <1..192
                     /locus_tag="VFM52_05330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007082224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1631 family protein"
                     /protein_id="HET8764622.1"
                     /translation="SGRYLFVNRRGLKVADYAPQELAVLLAGGHAQVLATNALFDRAM
                     SAIVNRLRQADTTPATPHS"
     gene            189..1043
                     /gene="nadC"
                     /locus_tag="VFM52_05335"
     CDS             189..1043
                     /gene="nadC"
                     /locus_tag="VFM52_05335"
                     /EC_number="2.4.2.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007807975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004514 - nicotinate-nucleotide
                     diphosphorylase (carboxylating) activity [Evidence IEA];
                     GO_process: GO:0019363 - pyridine nucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carboxylating nicotinate-nucleotide
                     diphosphorylase"
                     /protein_id="HET8764623.1"
                     /translation="MTATSFAPPAAALIAADVERAFAEDFGKGDATASLLDPGAGASA
                     ALTCRDDAVLAGTPWFDTCFRRLDPAVRIDWHARDGDRVAAGSVICHLAGRARALVGA
                     ERSALNFLQLLSATATATSRYVAAVAGTRARVLDTRKTLPGLRVAQKYAVRCGGGHNH
                     RMGLYDAILIKENHIIAAGGIGQAIAAARRLHPELLLEIEVENLDELRQAIAAGADRI
                     MLDNFTVPLMREAVGITAGRVPLEVSGNVDLATIAEYAHTGVDFISVGALTKHVHAVD
                     LSMRLQVV"
     gene            1261..1734
                     /locus_tag="VFM52_05340"
     CDS             1261..1734
                     /locus_tag="VFM52_05340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008212578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3301 domain-containing protein"
                     /protein_id="HET8764624.1"
                     /translation="MSNLDELLILLGLAALLGFWLKQSGARERATRVARAQCERYGVQ
                     LLDETVGLRRWRVRRREGRLGLERGYGFEVSIDGADREAGMLWIHEGTLVELHLPTVV
                     LTVPDEMCDAPEREPTMAPPADAAWQPPATLPPPATCDNVIPLHPRRRSGGGRPD"
     gene            complement(1789..2202)
                     /locus_tag="VFM52_05345"
     CDS             complement(1789..2202)
                     /locus_tag="VFM52_05345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007082221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ClpXP protease specificity-enhancing factor"
                     /protein_id="HET8764625.1"
                     /translation="MSSNRPYLLRAIYDWISDNGLTPYLLVNAAFDGVRVPPHVIKNG
                     QVVLNIAMRAVANLELGNDWINFSARFSGVSHTVHVPVGAVLALYAQENGQGMMFPAE
                     EDGETPPPAPPAPDETSGSDNAPPKRGAPHLRIVK"
     gene            complement(2223..2846)
                     /locus_tag="VFM52_05350"
     CDS             complement(2223..2846)
                     /locus_tag="VFM52_05350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017462668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase N-terminal
                     domain-containing protein"
                     /protein_id="HET8764626.1"
                     /translation="MVPSARSRNALTLYTSADDIQCHRARLVLAAKGVSYERVIVDPG
                     KPPEDLIDLNPYGTTPTLVDRDLTLYDTNVVCEYLDERYPHPPLMPIDPLSRARLRVA
                     AVRIENDWLVEIDHIRAGGRGAEPARKRLRAQLLGALPLFKAAKFFLNPEMSLLDCLV
                     APVVWRLPWLGVDLGREGRPIMDYGERLFHSQGFARSMTEQEQAMRS"
     gene            complement(2921..3649)
                     /locus_tag="VFM52_05355"
     CDS             complement(2921..3649)
                     /locus_tag="VFM52_05355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008439066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c1"
                     /protein_id="HET8764627.1"
                     /translation="MKRFLPAFALAFGLLLGAQPAAQAEGTGLMSAHASVRDPASLQR
                     GAHLFFDYCAGCHSLKYLRYSRMADDLGLTEKQVMQNLNFTGAKFQEPAVSSMPAADA
                     KKWFGKDPPDLSLEVSAKGADWVYTYLNTFYLDPASPIGWNNTTLKNAAMPFPLWELQ
                     GEQTAVMKPGTHDVEKLQLTTPGSLTPAEYQQATRDLVNFLTYASEPAAMQRHHYGVW
                     VILFLALFTLLAYFLKKEYWKDVH"
BASE COUNT          570 a         1273 c         1211 g          598 t
ORIGIN      
        1 agcggccgct acctgttcgt caaccgccgc ggcctgaagg tggccgatta cgcgccgcag
       61 gaactggccg tgctgctggc aggcggccac gcccaggtgc tggccaccaa cgcgctgttc
      121 gaccgtgcga tgagtgccat cgtcaaccgc ctgcgccagg ccgataccac ccccgccacg
      181 ccacattcat gaccgccact tcgtttgcgc cgcctgcggc cgcgctgatt gccgccgacg
      241 tcgaacgcgc ctttgccgag gatttcggca agggcgacgc caccgccagc ctgttggacc
      301 cgggcgccgg tgccagcgcc gcactcacct gccgcgacga cgccgtgctt gccggcactc
      361 cgtggttcga cacctgcttt cgtcgcctcg atccggcggt gcgcatcgac tggcatgccc
      421 gtgacggcga ccgcgttgcc gccggcagcg tgatctgcca cctggctggt cgcgcgcgcg
      481 cgctggtcgg tgcggaacgc tccgcgctca acttcctgca gctgctgtcg gccactgcca
      541 ccgccaccag ccgctacgtc gcagcggttg ccggcacccg ggcccgcgta ctcgacacgc
      601 gcaagacgct gcctggcctg cgcgtggcgc agaaatacgc cgtgcgttgc ggcggcggcc
      661 acaaccatcg catgggcctg tacgacgcga tcctgatcaa ggaaaaccac atcatcgccg
      721 ccggcggcat cggccaggcg attgccgcgg cacgccggct gcacccggag ctgctgctgg
      781 aaatcgaggt cgagaacctc gacgaattgc gtcaagcgat cgccgcgggc gccgaccgca
      841 tcatgctgga caacttcacc gtgccgctga tgcgtgaagc cgtcggcatc actgccggcc
      901 gcgtcccgct cgaggtttcc ggcaacgtcg atctcgccac catcgccgag tacgcgcaca
      961 ccggcgtcga cttcatctcg gtcggtgcac tgaccaagca cgtccacgcg gtggatctgt
     1021 cgatgcggtt gcaggtggtg tagcggcaac cgggattcgg aacggcggca cgccagcagc
     1081 ccaccgacca ttatccgggc accagtccgc catgggccgg attcgacccg actgcatcgc
     1141 cgcagctcgt cacggatccg cctgcgtcga ccgccacact ccgcggtctt tcaccgcggc
     1201 atccgcgccg ccatcgccgt ccgcttgcac cgcccccgtg ccgcccgcac actggatgcc
     1261 atgagcaacc tcgacgaact gctgatcctg ctcggcctgg cggctctcct gggcttctgg
     1321 ctcaagcaaa gcggtgcacg cgaacgggcc acgcgcgtcg cccgcgcgca atgcgagcgc
     1381 tacggcgtgc agttgctcga cgagaccgtc ggcctgcgcc gctggcgggt gcggcgacgc
     1441 gaaggccggc tgggcctgga acgcggctac ggcttcgagg tgagtatcga cggggccgac
     1501 cgcgaagccg gcatgttgtg gattcacgaa ggtacgctgg tcgaactgca cctgccaacg
     1561 gtggtgctga ccgtgccgga cgaaatgtgc gatgcaccgg aacgcgagcc cacgatggcg
     1621 ccgccagccg acgcggcatg gcagccgccg gcgacgctgc cgcctcccgc cacctgcgac
     1681 aacgtcattc cgctgcatcc tcggcgccgc tcgggcggcg gccggccgga ctgaccggcg
     1741 gttggcgact cgcgcctgcc ggcgctgccg agttgccccg gaaatcggct acttgacgat
     1801 gcgcagatgc ggcgcgccac gcttgggcgg cgcgttgtca ctgccgctcg tctcgtccgg
     1861 cgccggcggc gccggtggcg gtgtctcgcc atcctcttcg gcgggaaaca tcatgccctg
     1921 cccgttttcc tgcgcgtaca gcgccagcac cgcgccgacc ggcacgtgca cggtgtggct
     1981 cacgccggaa aaccgcgccg aaaagttgat ccagtcgttg cccagttcga ggttggctac
     2041 cgcgcgcatc gcgatgttca gcaccacctg gccgttcttg atgacgtgcg gcgggacgcg
     2101 cacgccgtcg aacgcggcat tgaccagcag gtacggggtc aagccgttgt cgctgatcca
     2161 gtcatagatc gcccgcagca ggtacgggcg gttggagctc atcgaaggcg gggtatcgct
     2221 catcaggatc gcattgcctg ttcttgttcg gtcatgctgc gcgcgaaacc ctggctatgg
     2281 aacaggcgct cgccgtaatc catgatcggg cgcccctcgc ggccgagatc gacgcccagc
     2341 cacggcagcc gccacaccac cggcgccacc aggcaatcga gcaggctcat ctcgggattc
     2401 aggaagaact ttgccgcctt gaacaacggc aacgcgccaa gcagctgcgc gcgcaggcgc
     2461 ttgcgtgccg gctcggcgcc ccgcccgccg gcgcggatgt ggtcgatctc gaccagccag
     2521 tcattctcga tacgcaccgc cgcaacccgc aggcgcgcgc gcgacaatgg atcgatcggc
     2581 atcaacggcg ggtgcggata ccgctcgtcc aggtactcgc acaccacgtt ggtgtcgtac
     2641 agcgtgaggt cgcggtcgac cagcgtcggc gtggtgccgt atgggttgag gtcgatcaga
     2701 tcctcgggcg gcttgcccgg gtcgacgatg acgcgctcgt agctgacgcc cttggcggcc
     2761 agtaccagcc gcgcacgatg acactggatg tcgtcggcgc tggtgtagag ggtgagtgcg
     2821 tttcgcgagc gagcgctggg aaccatgcgc ggtgttttcc tgttgcggtt gcgcggatgc
     2881 agcggctcac gccgccgcgt ccgtggcgcc cggctgaaac tcagtggacg tccttccagt
     2941 attccttctt gaggaaatag gcgagcaggg tgaacagcgc gaggaacagg atcacccaca
     3001 cgccgtagtg atgccgctgc atcgcggccg gctcggaggc ataggtgaga aagttgacca
     3061 ggtcacgcgt ggcctgctgg tattcggccg gcgtcagcga gcccggcgtg gtgagctgca
     3121 gcttctcgac gtcgtgcgtg ccgggcttca tcaccgcggt ctgctcaccc tgcagttccc
     3181 acagcgggaa cggcatcgcg gcattcttga gcgtggtgtt gttccagccg atcgggctcg
     3241 ccggatcgag atagaaggtg ttgaggtagg tgtagaccca gtccgcaccc ttcgcgctca
     3301 cctccagcga cagatccggc ggatccttgc cgaaccactt cttcgcgtcg gcggccggca
     3361 tgctcgacac cgccggctcc tggaacttgg cgccggtgaa gttgaggttc tgcatcacct
     3421 gcttctcggt caggccgagg tcgtcggcca tgcgcgagta gcgcaggtac ttcagcgagt
     3481 ggcagcccgc gcagtagtcg aagaacaggt gcgcgccgcg ttgcagcgag gccgggtcgc
     3541 gcacgctggc gtgcgcggac atcagcccgg tgccctcggc ctgtgccgcg ggctgggcgc
     3601 ccagcagcag gccgaacgcc aacgcaaaag ccgggagaaa ccgtttcatc aa
//
LOCUS       DASSVL010000309         2563 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1165222,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000309 DASSVL010000000
VERSION     DASSVL010000309.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2563)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2563)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2563
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1165222"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..459)
                     /locus_tag="VFM52_05360"
     CDS             complement(<1..459)
                     /locus_tag="VFM52_05360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007512765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional metallophosphatase/5'-nucleotidase"
                     /protein_id="HET8764628.1"
                     /translation="MSVRSTPFALPLLALAALALAGCSALPWRSGRVPDGARAQVAIL
                     ETTDIHATVLSYDYYRLKGDPTVGFERTATPIRPGRAEYPNHFLFDSGDTIQGSVLAD
                     YQALVKPVACDQELAVYRAMDAIGYDGGTPGNHEFNYGLGFLSQVTGTPMN"
     gene            584..2299
                     /locus_tag="VFM52_05365"
     CDS             584..2299
                     /locus_tag="VFM52_05365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008438633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LTA synthase family protein"
                     /protein_id="HET8764629.1"
                     /translation="MRSIPWRRVRGPAVCAGAVLLFVLCVAGTAWREPLPLQRVFVAA
                     LMLCGAVVLMAVLARFASALLLAGSLFVALKFIAVMKLRYLDEQLMPADFVYYVRSSL
                     LDTLRHYPHLYLLGIGLLVLLPPLLYLTWRWDWRVFSAFRARPAWLLRGAGLLLGASA
                     WWWCMWPGGPFAGVHARNTWEKLSDDAHLTNFFVSFRDAAVRLPPMSGDGEAERVWGA
                     AAQGLPSNRPPPYPDIVQVLEESTFDPSIFQVCNVPACRVAMFRPDKHTRGHGFLRTH
                     TFGGGTWVSEFAVESGLPQDIFGPGGMYAPFVLAPHLRDSLPDLLRRLGYATVAVYPT
                     NGDFINARNAYQSYGFDHLYDAEELGLKEWEESDTQMFDAAKRVYDKVKKPGQPVFIM
                     VLTLNQHGPHDEKPMKDLPRPFRDLLKGVSREVGLNFDTYLWQLHDSDVGMRHLEKLF
                     LARKDPTVIVHFGDHQPSFNSLIRGLARTLPDELRSEQDFLTYYMVKTNFPGPQLPSY
                     PALDIAYLPTMVIQAAGLPADAYFAAATQLRDRCQGRFTDCPDKALMTSYYGWIFNKL
                     DVYDE"
     gene            2304..>2563
                     /locus_tag="VFM52_05370"
     CDS             2304..>2563
                     /locus_tag="VFM52_05370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015448955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lysoplasmalogenase family protein"
                     /protein_id="HET8764630.1"
                     /translation="MTLPSTLPNLSIHRTATLVAAAAAILGALLATHAPGWLWLHWLG
                     KPLATGLILALAWRVRPARLSRYRQRVLAGIAASLVGDVLLML"
BASE COUNT          369 a          852 c          900 g          442 t
ORIGIN      
        1 gttcatcggc gtgccggtga cctgggacag gaagcccagt ccgtagttga actcgtggtt
       61 gccgggcgtg ccgccgtcgt agccgatcgc gtccatggcg cggtacaccg ccagctcctg
      121 gtcgcaggcc accggcttga ccagggcctg gtagtcggcc agcacgctgc cctggatggt
      181 gtcgcccgaa tcgaacagga aatggttggg gtactcggcg cgcccaggcc ggatcggcgt
      241 ggcggtgcgc tcgaagccga ccgtgggatc gcccttcagc cggtagtagt cgtagctgag
      301 cacggtggcg tggatgtcgg tggtttccag gatcgccacc tgcgcgcggg cgccgtcggg
      361 cacgcggccg gagcgccacg gcagcgcgga gcagccggcc agcgccagtg cggccagcgc
      421 aagcaggggg agggcgaacg gggtggatcg gacggacatg aaggttccgg gaacagccgc
      481 tgaggggacg gccaaagcta gcagatcgga cggctgccgc ggtgcccgac gaggtcgtaa
      541 gatgcggttg caggctcggt cctgcagggg gatggctcag ctcatgcgtt cgattccatg
      601 gcgccgcgtc cgcggcccgg cggtgtgcgc gggggccgtg ctgctgttcg tgctgtgcgt
      661 ggcaggcacg gcctggcgcg agccgcttcc cctgcagcgt gtgttcgtcg ccgcgctgat
      721 gctgtgcggc gccgtggtgc tgatggccgt gctggcgcgc ttcgccagcg cgctgctgct
      781 cgccggcagc ttgttcgtcg cgctgaagtt catcgcggtg atgaagctgc gctacctcga
      841 cgagcagctg atgccggcgg acttcgtcta ctacgtgcgc agcagcctgc tcgacacctt
      901 gcgccactat ccccacctgt acctgctcgg catcggcctg ctggtgctgt tgccgccgct
      961 gctctacctc acctggcgct gggactggcg cgtgttctcc gcctttcgcg cgcggccggc
     1021 atggctgttg cgcggcgcgg ggctgctgct gggcgcgtcg gcgtggtggt ggtgcatgtg
     1081 gccgggcggt ccgtttgccg gggtgcacgc gcgcaacacc tgggagaagc tctccgacga
     1141 cgcgcacctg accaacttct tcgtcagctt ccgcgacgcg gcggtgcggt tgccgccgat
     1201 gagcggcgac ggcgaggctg agcgcgtgtg gggtgcggcc gcgcaggggc tgccgtccaa
     1261 tcgcccgccg ccgtacccgg acatcgtgca ggtgctggag gagagcacgt tcgacccgtc
     1321 gatcttccag gtgtgcaacg tgccggcgtg cagggtcgcg atgttccgcc cggacaagca
     1381 cacgcgcggc catggtttcc tgcgcacgca caccttcggc ggcggcacct gggtcagcga
     1441 gttcgcggtg gaatccggcc tgccgcagga catcttcggc cccggcggca tgtacgcgcc
     1501 gttcgtgctc gcgccgcacc tgcgtgactc gctgccggat ctgctgcgcc ggctcggcta
     1561 cgcgacggtc gcggtgtatc cgacgaacgg cgatttcatc aacgcgcgca acgcctacca
     1621 gagctacggc ttcgatcacc tctacgacgc cgaggagctc ggcctcaagg agtgggaaga
     1681 aagcgacacg cagatgttcg acgcggcgaa acgggtctac gacaaggtga agaaaccggg
     1741 ccaaccggtg ttcatcatgg tgctcacgct gaaccagcac ggcccgcacg acgaaaaacc
     1801 gatgaaggat ctgccacgcc cgttccgcga cttgctcaag ggcgtatcca gggaggtcgg
     1861 cctcaacttc gatacctacc tgtggcagct gcacgactcc gacgtcggca tgcgccacct
     1921 ggagaagctc ttcctcgcgc gcaaggaccc gacggtgatc gtccacttcg gcgaccacca
     1981 gccctcgttc aacagcctga tccgcggcct ggcgcgcacg ctgcccgacg agctgcgcag
     2041 cgagcaggat ttcctcacct actacatggt caagaccaac ttccccggcc cgcagctgcc
     2101 gagctacccc gcgctcgaca tcgcctatct gccgaccatg gtgatccagg ccgccggcct
     2161 tcccgccgat gcgtatttcg ccgccgccac gcagttgcgc gaccgttgcc agggccgttt
     2221 caccgattgc ccggacaagg cgctgatgac gtcgtactac ggctggatct tcaacaagct
     2281 ggacgtctac gacgagtagg gcgatgacct tgccatccac gctgccgaac ctttccatcc
     2341 accgcaccgc gacgctggtg gcggccgcgg cggcgattct cggggcgttg cttgccacgc
     2401 acgcacccgg gtggctgtgg ttgcattggc tgggcaagcc actggcgacg gggttgatcc
     2461 tggcgctggc gtggcgggtg cggccggcgc gcctgtcgag gtaccggcag cgggtgctgg
     2521 ccggcatcgc cgcatcgctg gtgggcgacg tgctgctgat gct
//
LOCUS       DASSVL010000310         3916 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1306478,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000310 DASSVL010000000
VERSION     DASSVL010000310.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3916)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3916)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3916
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1306478"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(374..1702)
                     /locus_tag="VFM52_05375"
     CDS             complement(374..1702)
                     /locus_tag="VFM52_05375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019465411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate porin"
                     /protein_id="HET8764631.1"
                     /translation="MQPKLQPLLLTVALTLAGTARADDAPLFIPQWLGAQYTFVDQHQ
                     GRVHSPYAGPLSLRARSDTARSHTFGAYFGVALPAHLAFYFDVEMFRGEGVSGATGLG
                     GLTNGDVIRAGVAGLGRGAYVARRYLQWSLPLGGESENVERSQDHLPGTQATQRIDVK
                     LGKLAVNDDFDKNRYANGTRTQFMNWDLFNATSWDFAADTRGYTDGLMLAWVNPAWTL
                     RYGVYRMPYEANGQRLENSLRHARGEQWQLSLHPHPDGWVLRLLAFRNLARMGSYRDA
                     MAQARATGQVPDVRADDAPGRHKFGWVVNGELPLADGGDTGLFARVGWNDGHTESFAF
                     TEVDRTTSAGFQLSGAHWGRSADHLGVGFALNALSRPHHEYLELGGTGFVLGDGALDY
                     AHEEIAELYYSYAPFAHLTLSPDLQWIRHPGYNRDRGPVAFAGLRAHVEF"
     gene            complement(1853..3586)
                     /gene="poxB"
                     /locus_tag="VFM52_05380"
     CDS             complement(1853..3586)
                     /gene="poxB"
                     /locus_tag="VFM52_05380"
                     /EC_number="1.2.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014403970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA];
                     GO_function: GO:0052737 - pyruvate dehydrogenase (quinone)
                     activity [Evidence IEA];
                     GO_process: GO:0006090 - pyruvate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinone-dependent pyruvate dehydrogenase"
                     /protein_id="HET8764632.1"
                     /translation="MAIRNVADVLVETLANAGVRRIHGVVGDSLNGITESLRQRPEMS
                     WIHYRHEEAAAFAAGAEAQLTGQLAVCAGSCGPGNLHLINGLYDAQRSRTPVLAIAAH
                     IPSVEIGSGYFQETHPQDLFRECSHYCELVSSPSQIHRCAEIAVRTAVAQRGVSVLVI
                     PGDVALADASGPVADAASLLPVAPVVVPSSGQLDELAGLLAGGRKVTLFCGRGCAGAH
                     DLVMRLAEVLKAPVVHALGGKEHIEWNNPNDVGMTGLIGFSSGYQAMMECDTLLLLGT
                     DFPYRQFFPDDATICQIDLRGENLGRRCRLDLGLVGDVGATLEALLPRLKPARDDGHL
                     RTSLANYRKAREGLDELANGKPGQKPIHPQYVAKVVDQVASEDAVFACDVGTPTIWAA
                     RYLRMNGKRRLLGSFVHGSMANAMPQAIGAQAAYPQRQVVSLSGDGGFAMLMGDLLTL
                     VQHQLPVKIVVFNNGTLGFVELEMKAAGFLPTGVALDNPDFAAMARAIGILGTRVEDP
                     GELEGAVREAFAHDGPALVDVVTNRQELSMPPKIQLEQIKGFSLWALRTVMNGRGDEL
                     IELARSNLRRR"
     gene            3789..>3916
                     /locus_tag="VFM52_05385"
     CDS             3789..>3916
                     /locus_tag="VFM52_05385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004281784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC domain-containing protein"
                     /protein_id="HET8764633.1"
                     /translation="MSGTIRLLRVFTAPPERVYRAFLDPAALAKWLPPDGFTCTVH"
BASE COUNT          564 a         1329 c         1415 g          608 t
ORIGIN      
        1 gacgaggtgg tggtgtattg cgattgcccg aacgaggcgt ccgccgcggc cctggccgcg
       61 gagctgcgca agcacgggtt caatcacgtg cgtccgcttg ccggcgggtt cgagggctgg
      121 cgtgattcgg gccacgtgat cgcgggcgcg gcccacgagt gacgggtgtt ggcggtcgac
      181 gtagcgcgca aacccgggtg ggcgaaggcg aaaccggcac cgatccgcgc aaggccggca
      241 cggggctggc cttgcgcgga tcggccgcgt acggggcggg gctcaagcgg cctgcacggg
      301 cgttcccagc gcgtcgccgg cccggtgcgc cgccgccgcg gccgggctcg aaagtgaacc
      361 cgaccccgtt cgctcagaac tccacgtgcg cccgcagccc ggcgaacgcc accggcccgc
      421 gatcgcggtt gtagccgggg tggcgaatcc actgcaggtc ggggctgagc gtgagatggg
      481 cgaagggcgc atagctgtag tacagctcgg cgatttcctc gtgcgcgtag tccagtgcgc
      541 catcgcccag cacgaagccg gtgccgccca gttcgaggta ttcatgatgc ggccgcgaca
      601 gcgcgttgag cgcgaagccg acgccgaggt ggtcggcgct gcggccccag tgcgcgccgg
      661 aaagctggaa gccggcgctg gtagtgcgat cgacttcggt gaatgcgaag gactcggtgt
      721 ggccatcatt ccagccgacg cgggcaaaca ggccggtgtc gccaccgtcg gccaacggca
      781 gctcgccgtt gaccacccag ccgaacttgt ggcgaccggg cgcatcgtcg gcgcgcacgt
      841 cgggcacctg gccggtggcc cgggcctgcg ccatggcgtc gcggtagctg cccatgcgcg
      901 cgaggttgcg gaacgcgagc aggcgcagta cccagccatc gggatgcggg tgcaggctca
      961 gttgccactg ctcgccgcgc gcgtggcgca gcgagttttc cagccgctgc ccgttcgcct
     1021 cgtaaggcat gcggtagacg ccgtagcgca gcgtccaggc cgggttgacc caggccagca
     1081 tcaggccgtc ggtgtagccg cgggtatcgg ccgcgaagtc ccagctggtg gcgttgaaca
     1141 ggtcccagtt catgaactgg gtgcgcgtgc cgttggcgta gcggttcttg tcgaagtcgt
     1201 cgttcaccgc cagcttgccc agcttcacgt cgatccgttg cgtggcctgg gtgccgggca
     1261 ggtggtcctg gctgcgttcc acgttctcgc tttcaccgcc cagcggcagc gaccattgca
     1321 ggtagcgtcg cgccacgtag gcgccgcggc ccagcccggc cacgccggcg cggatcacgt
     1381 cgccgttggt gagcccgccc agcccggtgg cgccgctgac gccttcgccg cggaacatct
     1441 ccacgtcgaa atagaaggcg agatgcgccg gcagggccac gccgaagtag gcgccaaacg
     1501 tgtgcgagcg tgcggtgtcg ctccgggcac gcaggctcag cgggccggcg tagggcgagt
     1561 gcacccggcc ctggtgctgg tcgacaaagg tgtattgcgc acccagccat tgcgggatga
     1621 acagcggcgc gtcgtcggcg cgggcggtcc cggccagcgt gagcgcgaca gtgagcagca
     1681 ggggctggag cttcggttgc atcgtggggg ccggcggggt tcagggcgga tgaagcgcgt
     1741 gcgcattctc gccttgccgc ccgccagtgc aaccggcacc ggtgttgccg gatcaagccg
     1801 ggttcagcgg gcaccgggca gggacggagc ggaccgcgcc cgccgcctgc cttcagcgtc
     1861 gccgcaggtt gctgcgcgcc agctcgatca gctcgtcgcc gcggccgttc atcaccgtgc
     1921 gcagcgccca caggctgaag cccttgatct gctcgagctg gatcttcggc ggcatcgaca
     1981 gctcctgccg gttggtgacg acgtcgacca gcgccgggcc gtcgtgtgcg aaggcttcgc
     2041 gcaccgcgcc ttccagctcg ccgggatctt ccacgcgcgt gccgaggata ccgatggcgc
     2101 gggccatcgc ggcgaagtcc gggttgtcca gcgccacgcc ggtgggcaga aagccggcgg
     2161 ccttcatctc cagctccacg aagcccagcg tgccgttgtt gaacaccacg atcttcaccg
     2221 gcagctggtg ctgcaccagg gtgagcagat cgcccatcag catcgcgaag ccgccgtcgc
     2281 cggagaggct gaccacctgg cgttgtggat acgcggcctg cgcgccgatc gcctgcggca
     2341 tcgcgttggc catcgagccg tgcacgaagg agccgagcag gcgccgcttg ccgttcatgc
     2401 gcagatagcg cgcggcccag atcgtgggcg tgcccacgtc gcaggcaaat accgcatctt
     2461 cgctggcgac ctggtccacc accttcgcca cgtattgcgg gtggatgggc ttctggcccg
     2521 gcttgccatt ggcgagctcg tccagccctt cgcgcgcctt gcggtaattg gcaaggctgg
     2581 tcctgaggtg gccgtcgtcg cgtgcgggct tgaggcgcgg cagcagcgcc tcaagcgtgg
     2641 cgcccacatc gccgaccagg cccaggtcga gccggcagcg gcgaccgagg ttctcgccgc
     2701 gcaggtcgat ctggcagatc gtggcgtcat ccgggaagaa ctgccggtac gggaagtcag
     2761 tgccgagcag cagcagggtg tcgcactcca tcatcgcctg gtagccggag ctgaagccga
     2821 tcaggccggt catgccgacg tcgttggggt tgttccattc gatgtgctcc ttgccgccca
     2881 gcgcgtgcac caccggcgcc ttcagtacct cggccaggcg catcaccagg tcgtgcgcgc
     2941 cggcgcagcc gcgcccgcag aacagggtga ccttgcggcc gccggccagc agcccggcca
     3001 gctcgtcgag ctgcccggac gagggcacca ccacgggggc cacgggcaac aggctggcgg
     3061 catcggcgac cgggccggag gcgtcggcca gcgccacgtc gccggggatc accagcaccg
     3121 acacgccacg ctgcgcgacg gcggtgcgca ccgcgatctc ggcgcagcga tggatctggc
     3181 tggggctgct gaccagctcg cagtagtggc tgcattcgcg gaacaggtcc tgcgggtggg
     3241 tttcctggaa atagccgctg ccgatctcca ccgaggggat gtgcgcggcg atcgccagca
     3301 ccggcgtgcg cgagcgctgc gcgtcgtaca ggccgttgat caggtgcagg ttgccggggc
     3361 cgcaggagcc ggcgcatacc gccaactgac cggtgagctg cgcctcggcg ccggcggcga
     3421 acgcggcggc ctcctcgtgc cggtagtgta tccagctcat ttccgggcgc tggcgcagcg
     3481 attcggtgat gccgttgagg ctgtcgccga ccacgccgtg gatgcggcgc acgccggcgt
     3541 tggccagggt ttcgaccaac acgtcggcga cgttgcggat ggccatcgag cgctcctgaa
     3601 aacctggggc gcccatgctg tcacgcggat gctccgggcg gcgtgaaagg cggcgatggg
     3661 catcggtcac gcctgcgggc acggcagcgc gcacgatcgg agaaatcggt gcaccattcg
     3721 tttcgatgtg cggctggtcc gtccgtcgcc atcgtggaac cccctcgtcg atcagctgga
     3781 gatccaccat gtccggcacc attcgcctgt tgcgcgtgtt caccgccccg cccgaacgcg
     3841 tctatcgcgc cttcctcgat cccgccgcgc tggccaaatg gctgccgccg gatggcttca
     3901 cctgcaccgt gcacga
//
LOCUS       DASSVL010000311         3071 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_981921, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000311 DASSVL010000000
VERSION     DASSVL010000311.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3071)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3071)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3071
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_981921"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..340
                     /locus_tag="VFM52_05390"
     CDS             <1..340
                     /locus_tag="VFM52_05390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007808180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit alpha
                     C-terminal domain-containing protein"
                     /protein_id="HET8764634.1"
                     /translation="EIINDQVAVFGDFSHRESATDKAEKSGFDPLLLRPIDDLELTVR
                     SANCLKAESIYYIGDLVQKTEVELLKTPNLGKKSLTEIKDVLGSRGLALGMKLENWPP
                     AGISHGMQLG"
     gene            569..955
                     /gene="rplQ"
                     /locus_tag="VFM52_05395"
     CDS             569..955
                     /gene="rplQ"
                     /locus_tag="VFM52_05395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014402162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005762 - mitochondrial large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L17"
                     /protein_id="HET8764635.1"
                     /translation="MRHLYSGRKLNRTTAHREAMFKNMASSLFKHELIRTTLPKAKEL
                     RRVAEPLITLSKTDSVANRRLAFARLRDKEAVGKLFVELGPRYRERAGGYLRILKCGF
                     RDGDNAPMAYVELVDRPQPQAEAAAE"
     gene            1110..1628
                     /locus_tag="VFM52_05400"
     CDS             1110..1628
                     /locus_tag="VFM52_05400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008208453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="disulfide bond formation protein B"
                     /protein_id="HET8764636.1"
                     /translation="MNPLHWSFRVGYLVGFLVCAGLIAFALYAQYVLLMDPCPLCILQ
                     RVVFIALGIVFLVGGLHAPRGGGRWVYVALTVAVALVGAGIAIRHLWIQSLPPGAVAS
                     CGAPLGYLLETRASNGGLVAVLLKVLSGSGECAAVQPILGLSMPWWSLIWFVLLGAWA
                     VVTGRRRIGAPV"
     gene            1625..2986
                     /locus_tag="VFM52_05405"
     CDS             1625..2986
                     /locus_tag="VFM52_05405"
                     /EC_number="2.5.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008435456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003849 - 3-deoxy-7-phosphoheptulonate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase class II"
                     /protein_id="HET8764637.1"
                     /translation="MSAAVHDLRPADWSPASWRARPALQQPHYEDAGELADALAKLAE
                     LPPLVTSWEVLALKQGLAEAQEGKRFLLQGGDCAESFADCTSPIISNRLKVLLQMSLV
                     LVHGLQQPVLRVGRFAGQYAKPRSADTETRDGVTLPSFRGDVVNGAAFTAEARRADPQ
                     RLIRAHAHSALTMNFVRALIGGGFADLRHPEYWDLAWVEHSPLAAEYRQMVKAIGDSL
                     RFMETLAGPIAGFSKVDFYTSHEALLLDYEQAQTRLVPRNPGWFNLATHFPWIGMRTA
                     ALDGAHVEYFRGIRNPIGVKVGPSVTPAQLLPLIERLNPSDEPGRLTLIHRMGNAKIA
                     TALPPLLEAVKRSGRRVLWVADPMHGNTENTSNGYKTRRFDNIRGELEQAFDIHAAAG
                     TRLGGVHLELTGEDVTECTGGARGLSEADLDRAYKSMVDPRLNYEQSLELAMLIVRKS
                     VRG"
BASE COUNT          484 a          973 c         1066 g          548 t
ORIGIN      
        1 cgagatcatc aacgaccagg ttgcggtgtt cggtgacttc tcgcatcgcg agagcgcgac
       61 cgacaaggcc gagaagagcg ggtttgatcc gctgctgctg cgcccgatcg acgatctcga
      121 gctcaccgtg cgttcggcca actgcctcaa ggccgagagc atctactaca tcggcgacct
      181 ggtgcagaag accgaggtcg agctgctgaa gacgccgaac ctgggcaaga agtcgctcac
      241 cgagatcaag gatgtgctcg gttcgcgcgg cctcgcgctt gggatgaaac tggaaaactg
      301 gccgccggcc ggcatctcgc acgggatgca gctgggttga tgggttgcgt gcgcggtcat
      361 tcgtgatcgc ggcagtcgaa gcggttgccg tcgcggcaac cgtttcggtg ttttgaaagt
      421 gcgccagcag tacccctcac tagggctttg ctccgatgag ggttgtgaaa gagcctcggt
      481 ttcgctgagg ccataaaagc gggcagccgc ggggtgtcgg acacaggtgc cggcgcttca
      541 taacaacaga ccacagagag agattgtcat gcgccacctt tactccggac gcaagctcaa
      601 ccgcaccacg gcccaccgtg aggcgatgtt caagaacatg gcgtcgtcgc tgttcaagca
      661 cgagctgatc cgcaccacct tgccgaaggc caaggagctg cgccgcgtcg ccgagccgct
      721 gatcaccctg tccaagaccg acagcgtcgc caaccgccgc ctggcgtttg cgcgcctgcg
      781 cgacaaggaa gcggtgggca agctgttcgt cgagctcggg ccgcgctacc gcgagcgtgc
      841 cggcggctac ctgcgcatcc tcaagtgcgg tttccgcgac ggcgacaacg caccgatggc
      901 ctatgtcgag ctggtcgatc gcccgcagcc gcaggcggaa gccgcggccg agtaagtcga
      961 ttcaggtacg gacgtccaga cgtccgaatg aaagccccgg ccgggagact ggccggggct
     1021 tttcgttatg ccgccgggtg cggtgcgatg gctgctgaca gcgtgccgca aagcggttaa
     1081 cgtcgcagtt ttccggtgat gacatcagca tgaatccctt gcactggtcg tttcgcgtcg
     1141 gctatctggt gggcttcctc gtctgtgcgg gactgatcgc gttcgcgctg tacgcgcagt
     1201 acgtgctgct gatggatcca tgtccgttgt gcatcctgca gcgcgtggtg ttcatcgcgc
     1261 tcggcatcgt gttcctggtc ggcggcctgc atgcgccgcg cggcggcggc cgctgggtgt
     1321 acgtggcgct gacggtggcc gtagccttgg tcggggccgg cattgccatc cgtcacctgt
     1381 ggatccagtc actgccgccg ggcgcggtgg cgagctgcgg cgcaccgctc ggttatctcc
     1441 tcgaaacccg tgccagcaat ggcggcctgg ttgccgtatt gctgaaggtg ctgtcgggct
     1501 ccggcgaatg tgcggcggtg cagccgatcc tcgggctgtc gatgccgtgg tggtcgctga
     1561 tctggtttgt cctgcttggc gcgtgggccg tcgtcaccgg gcgccgccgt attggggcac
     1621 cagtatgagc gccgcggtgc acgacctccg cccggctgac tggtcgcccg cttcgtggcg
     1681 cgcgcgcccg gcgttgcagc aaccccatta cgaggatgcc ggcgagttgg ccgacgcgct
     1741 ggcgaagctg gccgagttgc cgccgctggt cacctcgtgg gaggtcctgg cgctcaagca
     1801 ggggctggcg gaagcgcagg agggcaagcg gttcctgttg cagggcggtg attgcgccga
     1861 gagctttgcc gattgcacca gcccgatcat ctccaaccgg ctcaaggtgc tgctgcagat
     1921 gagcctggtg ctggtacacg ggttgcagca gccggtgttg cgggtggggc ggttcgccgg
     1981 gcagtacgcg aagccgcgtt cggccgatac cgagacccgt gacggcgtga cgctgccgag
     2041 ctttcgcggc gacgtggtga acggcgccgc gttcaccgcc gaggcgcgcc gcgccgatcc
     2101 gcagcggctg attcgcgcgc atgcccactc ggcgttgacg atgaacttcg tgcgcgcgct
     2161 gatcggcggc gggtttgccg acctgcgcca cccggaatac tgggatctcg cgtgggtcga
     2221 gcattcacca ctggctgccg aataccggca gatggtcaag gccatcggcg attcgctgcg
     2281 cttcatggaa acgctggccg gtccgatcgc cggcttctcc aaggtggatt tctacacctc
     2341 gcacgaggcg ttgctgctcg actacgagca ggcgcagacc cggctggtgc cgcgcaaccc
     2401 cggctggttc aacctcgcga cccatttccc gtggatcggc atgcgcaccg cggcgctgga
     2461 tggcgcccat gtggagtact ttcgcggcat ccgcaacccg atcggggtca aggtcgggcc
     2521 gagtgtcacg ccggcgcagc tgctgcccct gatcgaacgc ctgaatccaa gcgacgagcc
     2581 ggggcggctg acgctgatcc accgcatggg caacgcgaag atcgccacgg cactgccgcc
     2641 actgctggaa gccgtgaagc gctccggccg gcgcgtgctg tgggtggccg acccgatgca
     2701 cggcaacacc gagaacacct cgaacggcta caagacccgc cgtttcgaca acatccgcgg
     2761 cgagctggag caggcgttcg atatccatgc tgccgccggc acgcggctgg gcggcgtgca
     2821 tctcgaactc accggcgagg acgtcaccga gtgcaccggc ggtgcgcgtg gcttgtccga
     2881 ggccgatctc gaccgggcgt acaagtcgat ggtcgacccg cggctcaact acgagcagtc
     2941 gctggagctg gcgatgctga tcgtgcgcaa atcggtgcgt gggtagccgg cgcaggccag
     3001 gcctcagctc ggcgggcgtg ccgttgtcgg gctggagtca ggcccaccat tgcggtcaat
     3061 gaccgggtgc c
//
LOCUS       DASSVL010000312         4347 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1151585,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000312 DASSVL010000000
VERSION     DASSVL010000312.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 4347)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4347)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4347
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1151585"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            18..196
                     /locus_tag="VFM52_05410"
                     /pseudo
     CDS             18..196
                     /locus_tag="VFM52_05410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010342715.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2164 domain-containing protein"
     gene            437..820
                     /locus_tag="VFM52_05415"
     CDS             437..820
                     /locus_tag="VFM52_05415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8764638.1"
                     /translation="MLFERPLRNARGHFFHAELDRQYVNGCFVRAKAPPGQDAGMYPQ
                     SFFSWALRDGAAELQLERSPDAGYEVRLELAPKGLSGTGMVWGAAVGPLAPGATPPPR
                     DEVAAERLGDPDIKRCAPLPREDFL"
     gene            complement(831..1649)
                     /locus_tag="VFM52_05420"
     CDS             complement(831..1649)
                     /locus_tag="VFM52_05420"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007511552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008934 - inositol monophosphate
                     1-phosphatase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006020 - inositol metabolic process
                     [Evidence IEA];
                     GO_process: GO:0046855 - obsolete inositol phosphate
                     dephosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="inositol monophosphatase family protein"
                     /protein_id="HET8764639.1"
                     /translation="MTRPAITIAVRAARAAGNVILRYMNRIDSLTVVEKQRMDFASEV
                     DKLAEAEIVKELRRAYPDHGILAEESGAIGKPGPLTWVIDPLDGTHNYLRGIPHFSVS
                     IALLDKGVPVYGVVFDPLRGELFTASKGDGAYLDRGTGPNRIRVGKRENLGGAMLATG
                     FPYRQRAHLDAQLAMTRAMLGQAEDIRRTGSAALDLAYTAAARFDGYFEIGLKPWDLA
                     AGVLLVHEAGGRYTDFAGRDGIPASGNIVAGNLNVTQAMLDAIGANATPELLKA"
     gene            1965..2786
                     /locus_tag="VFM52_05425"
     CDS             1965..2786
                     /locus_tag="VFM52_05425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017462131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA methyltransferase"
                     /protein_id="HET8764640.1"
                     /translation="MTPSELAPLFRYVLVRTSHPGNIGSAARAIRTMGFTRMELVAPH
                     RFPDREANALAAGADDVLEGAGVHAGMVEALAGCRYAIGLSARRRGVNLPELTPREGA
                     RQALDAALRGEQVALVFGNERTGLENEELAHCHAMVRIPSVDDFSSLNLAQAVQVMAY
                     EMRLMLLGDTLPSAPPEHGEPPAEIAQMEQFYAHLAQTLDDIDFHKGREPTTIMLRLR
                     KLFQRAQPDQRELRVLHGILADAQRMAHLAGQAPASSRSMARSMDGSPVNQAKPD"
     gene            complement(3017..4342)
                     /locus_tag="VFM52_05430"
     CDS             complement(3017..4342)
                     /locus_tag="VFM52_05430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007805737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin family protein"
                     /protein_id="HET8764641.1"
                     /translation="MLTEIALVFVLALANGFFALSEMALIASRKSRLKQMARHSRHAA
                     IALRHAERPEYFLSTVQVGITLVMLVTGAIAGDAVGTHLAQWLHGGRAAALEPYARVI
                     GVVLGFALISFIQIVVGELVPKRVALAGPEKLSAVVAMPMLVLSRITAPFVWTLNAAS
                     GLLLRALRIHGRGHSAASEEEIRLLVAESAEQGVLDEDEHNMVNRVLRLGDRTVDSVM
                     TPRVRIAWLDMAAPRKDNLATLKQTPYSRYPVYRGDESEVVGVVEVKRLLQGFAEGRP
                     QLFDHLAKPLYVPSTARALDLLEQFRDADTQLALAVDEYGDIEGLVTVSDLFAAVVGA
                     PQLAHADTNEEAPIVTREDGSWLVDGSLANDDLRELLGLDRLPGEDSNDYNTAAGMVM
                     ATLGHIPQTGEVFSAQGFRFEVVDLDGARIDKLLITREAAAPAVDDGDG"
BASE COUNT          659 a         1459 c         1537 g          692 t
ORIGIN      
        1 gctatttcgc cgacgaactg aagcaggaaa ttggccgctt cgacgcggag ttcctgctgg
       61 atttcttcgc cggtgaaatc ggtgcccatt tctaaaccgc ggcctgtacg acgcccaagc
      121 catcctcgcg gacaggatgg acgaactggg cgacgcgatc tatcagctgg agcggccgac
      181 cgaattccgg cggtgaaggc gcgcttgccg tggcgttcct tgcgcggatg ccggtgcgga
      241 aggaggatca gccacccaaa ccgcgagggg agtggtcatg ccttggattc attccggtct
      301 gcttgccctg gtgtttttgt ccacgggtac ggccggttcc tacgcagcgt tgcacccggc
      361 ggcttatgca gggacctatg ccatccgctt gtgccagggg tcttgtcgcg gggcgcctta
      421 ttcctccgga accatcgtgc tgttcgaacg gcctttgcgg aatgcgcgag ggcacttctt
      481 ccacgccgag cttgaccggc agtacgtcaa cggctgtttt gtccgcgcaa aagcgccgcc
      541 gggccaggat gccggcatgt atccgcaatc ctttttctcg tgggcgttac gggatggcgc
      601 cgccgagctt cagctggagc gctcgccgga cgccggctat gaagtgcgcc tggagctggc
      661 gccaaagggc ctgagcggca ccggcatggt gtggggagct gcggtcgggc cgctggcacc
      721 gggtgccacg ccgccgccac gggatgaagt ggctgcggag cgccttggtg acccggacat
      781 caagcgatgc gcgccgctgc cgcgagagga tttcctgtag ccgacggcgc tcaggccttc
      841 aacaactccg gcgtcgcgtt ggcgccgatc gcgtccagca tggcctgggt cacgttgagg
      901 ttgccggcga cgatgttgcc gctggcggga atgccgtcgc ggccggcgaa gtcggtgtag
      961 cggccgccgg cctcgtgcac cagcagcacg ccggcggcga gatcccacgg cttgaggccg
     1021 atctcgaaat agccgtcgaa acgcgcggcg gcggtgtagg cgaggtcgag cgcggcggag
     1081 ccggtgcggc gaatgtcctc ggcctggccg agcatcgcgc gggtcatcgc cagctgcgca
     1141 tcgaggtgcg cgcgctggcg gtacgggaag ccggtggcga gcatggcgcc gccgaggttc
     1201 tcacgcttgc cgacgcggat gcggttgggg ccggtgcccc gatccaggta ggcaccgtcg
     1261 cccttgctgg cggtgaacag ctcgccgcgc agcgggtcga acaccacgcc gtacaccggc
     1321 acgcccttgt cgagcagggc gatcgagacg gagaaatgcg ggatgccgcg caggtagttg
     1381 tgggtgccgt cgagcgggtc gatcacccag gtcagcgggc ccggcttgcc gatggcgccg
     1441 ctttcctcgg cgaggatgcc gtggtcgggg taggcgcggc gcagctcctt gacgatctcg
     1501 gcctcggcca gcttgtcgac ctcggaggcg aaatccatgc gctgcttctc gaccaccgtg
     1561 aggctgtcga tgcggttcat gtaacgcagg atgacgttgc cggcggcgcg cgcagcgcgc
     1621 accgcgatgg tgatggcggg tcgcgtcatg gcttcggctt gggaaaagag cggatcgcag
     1681 ccggcgattt tagaagctcg ggcggcagaa atcatccgcg ctgccacgct cggccggccg
     1741 gcccggcgcc cgacctgcgg ggcagcgtcg atcttgtggg ggcttgagcc cgacgacgcc
     1801 ttgccaagag cctggtcggg acgaatctcg actcacgaga gcgccagcgt cgcgggatgc
     1861 ttggacaggt cggccttcag cccgccgcgg gacttcaggc cgccgaagcc cgagccaccg
     1921 ggcgcctgcc gtatgctggg cagtcctttt cccgcagtat gaccatgact ccgtccgaac
     1981 ttgccccgct tttccgctac gtgctggtgc gcacctcgca ccccggcaac atcggcagcg
     2041 cggcgcgcgc gatccgcacc atgggcttca cccgcatgga gctggtcgcg ccgcaccggt
     2101 ttcccgaccg cgaggccaat gcgctggcgg cgggcgccga cgacgtgctg gaaggcgccg
     2161 gcgtgcatgc cggcatggtc gaggcgctgg ccgggtgccg gtacgcgatc gggttgtcgg
     2221 cgcgccggcg cggcgtgaac ctgccggagc tcacgccgcg cgagggcgcg cgccaggcgc
     2281 tggacgcggc gctgcgcggg gagcaggtgg cgctggtgtt cggcaacgag cgcaccgggc
     2341 tggagaacga ggagctggcg cattgccacg cgatggtgcg catccccagc gtggacgatt
     2401 tcagctcgct gaacctcgcc caggcggtgc aggtgatggc gtatgaaatg cgcctgatgc
     2461 tgctcggcga cacgctgccg tcggcgccgc ccgagcacgg cgagccgccg gccgagatcg
     2521 cgcagatgga gcagttctac gcgcacctcg cgcagacgct ggacgacatc gatttccaca
     2581 aggggcgcga gccgaccacg atcatgctgc gcctgcgcaa gctgttccag cgcgcccagc
     2641 ccgaccagcg cgagctgcgc gtgctgcacg gcatcctcgc cgatgcgcag cgcatggccc
     2701 acctcgcggg gcaggcgccg gcatcctcgc gatccatggc gcgatccatg gatggatcgc
     2761 ccgtcaatca ggccaagcct gattgacgga gcccgatccg gctccatcgg atcgggcgag
     2821 cttcagggaa gggcaggaag cccttccccg agcatcagta aacgcggtgg ctttgatgcc
     2881 tcggactgcg tgacatcagc caccagccgc ctcgcgaaca acgagccgcc catcgacgcg
     2941 cgcgccgccc gatgccatca cctcgaagca ccgtcaacgc acgcagttgc ctcgatccac
     3001 cgcgatgagc ggagaatcag ccatctccat cgtcgacggc cggggcggcc gcctcgcgcg
     3061 taatcagcag cttgtcgatg cgtgcgccgt ccaggtcgac cacctcgaag cggaaaccct
     3121 gtgcgctgaa cacctcgccg gtctgcggga tgtggccgag cgtggccatc accatgccgg
     3181 cggcggtgtt gtagtcgttg ctgtcttcgc cgggcaggcg atcgagcccc agcagttcgc
     3241 gcaggtcgtc gttggcgagg ctgccgtcca ccagccagct gccgtcctcg cgggtgacga
     3301 tcggtgcctc ctcgttggtg tcggcgtggg cgagctgcgg cgcgccgacc acggcggcga
     3361 acaggtcgct caccgtcacc agcccttcga tgtcgccgta ttcgtcgacc gccagcgcga
     3421 gctgggtgtc ggcgtcgcgg aactgttcga gcagatccag cgcgcgcgcg gtcgacggca
     3481 cgtacagcgg cttggcgagg tggtcgaaca gttgcggccg gccctcggcg aagccctgca
     3541 gcaggcgctt gacctcgacc acgcccacga cttcgctctc gtcgccgcgg tacaccgggt
     3601 agcgcgagta cggggtctgc ttgagcgtcg ccaggttgtc cttgcgcggc gccgccatgt
     3661 ccagccaggc gatgcgcacg cgcggggtca tcacgctgtc cacggtgcgg tcgcccaggc
     3721 gcagcacgcg gttcaccatg ttgtgctcgt cctcgtcgag cacgccctgc tcggcgcttt
     3781 cggcgaccag caggcggatc tcctcctcgc tggccgccga atggccgcgg ccgtggatgc
     3841 gcagcgcacg cagcaggagc ccgctggcgg cgttcagggt ccacacgaac ggggcggtga
     3901 tgcgcgacag caccagcatc ggcatcgcca ccaccgcgga gagtttttcc ggcccggcca
     3961 gcgccacgcg cttgggaacc agctcgccga ccacgatctg gatgaacgag atcagcgcga
     4021 agccgagcac cacgccgatc acgcgcgcat agggttccag cgccgcggcg cggccgccgt
     4081 gcagccattg cgcgaggtgg gtgccgacgg cgtcgccggc aatcgcgccg gtgaccagca
     4141 tcaccaaagt gatgccgacc tgcaccgtgg agaggaaata ctccggccgc tccgcgtggc
     4201 gcagcgcgat cgctgcgtgc cggctgtgcc gcgccatctg cttcaggcga ctcttgcgcg
     4261 acgcgatcag cgccatctcg gagagcgcga agaagccgtt ggcgagcgcc agcacgaaga
     4321 cgagcgcgat ttcggtcagc atcgcgg
//
LOCUS       DASSVL010000313         3552 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_911008, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000313 DASSVL010000000
VERSION     DASSVL010000313.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3552)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3552)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3552
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_911008"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..565)
                     /locus_tag="VFM52_05435"
     CDS             complement(<1..565)
                     /locus_tag="VFM52_05435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007514580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YihY family inner membrane protein"
                     /protein_id="HET8764642.1"
                     /translation="MKLRFDRDRLTSFGRFLWRRFVDDKCFETAGALSYTTLVSLVPL
                     TVAVLAMFAAFPMFAEARGTLIDFVFPNFVPAAGERVQETLIAFAANASKLTGLSILV
                     MLFSAISMMVSIEDRLNRIWRVRQPRGWGPRLLLYWAALTLGPILAVGGIALASYATA
                     VPLLQATAGHWVSMGQRLLALLPFVATF"
     gene            631..1227
                     /gene="wrbA"
                     /locus_tag="VFM52_05440"
     CDS             631..1227
                     /gene="wrbA"
                     /locus_tag="VFM52_05440"
                     /EC_number="1.6.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011346526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003955 - NAD(P)H dehydrogenase (quinone)
                     activity [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H:quinone oxidoreductase"
                     /protein_id="HET8764643.1"
                     /translation="MSDLLVLYYSHHGATAQLARLIARGIEEVPGAVARLRQVPPVAP
                     VTEVARPPVPEDGAPYVSRADLAQCSGLALGSPTRFGNMAAPLKYFLDGTAAEWASGT
                     LVGKPAAVFTSTTTMHGGQESTLLSMALPLLHHGMLLVGIPFTEPELTATQSGGSPYG
                     ATHVSGPHGDRPISEHERALARTLGRRLADAARRLATP"
     gene            1224..1580
                     /locus_tag="VFM52_05445"
     CDS             1224..1580
                     /locus_tag="VFM52_05445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007514584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2069 domain-containing protein"
                     /protein_id="HET8764644.1"
                     /translation="MNAPLPIEQKLGLAAWAALTLLQPAWHGWLFPAASLTATMWILG
                     IATVPLLLPLLALRRVTRALLWVGILALFYFCHGVAEAWSMPAERALASIEIVLTLVL
                     IGALGAGVRQPRRRRD"
     gene            1652..3280
                     /locus_tag="VFM52_05450"
     CDS             1652..3280
                     /locus_tag="VFM52_05450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008435541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HET8764645.1"
                     /translation="MAFLQTAPQLEHPWRSERLLHAMLDRVLPGERRAALDADLDALG
                     DYASQAWQRARGTTPRTPVLTQWDAWGERVDRIELTPAWQEGAAITARHAVLAAGHEA
                     SEFARLEEFARVYLYHVASEFYTCPLAMTDGAATALKAAGNQALIERALPHFLSRDPA
                     TLWLSGQWMTETHGGSDVGNTETVARRGDDGQWRLYGRKWFSSAVVGEAALALARPEG
                     AGNGSGALALFYVETVDGARRKPELVIDRLKDKLGTRELPTAEIHLDGLPAWPVGELA
                     HGVRQIAPVLNITRTWNTICAVAHMARAIALARDYAMHRHAFARPLIEQPLHAQTLAD
                     LQAEFEGAFALGFEVAHLLGRVEHGVAAAHEVQLLRLLTPLAKLWTGKLAVRICSEAL
                     ECFGGQGYIEDTGLPQLLRDAQVYPIWEGATNVLALDALRTLDGSALMALRTACAAWT
                     ENGDPRAAFAIDTALDAVESHLDGDRDRLEAGARGVALTLARCATAALLARQATWSQE
                     RADARPAAALRRFLGHGLTRLADTEPDDTHLLLG"
     gene            3328..>3552
                     /locus_tag="VFM52_05455"
     CDS             3328..>3552
                     /locus_tag="VFM52_05455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011036092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparaginase"
                     /protein_id="HET8764646.1"
                     /translation="MQHLTIVTTGGTIDKIYFDDKSDYKIGAPQIGDILGQLGVAFTF
                     DVIPILRKDSLHITAEDRALIRSTIEAQPAR"
BASE COUNT          542 a         1334 c         1202 g          474 t
ORIGIN      
        1 cgaaggtcgc cacgaagggc agcagcgcca gcaggcgctg ccccatgctc acccagtgtc
       61 ccgccgtcgc ctgcagcagc ggcaccgccg tggcgtagga cgccagcgcg atgccgccca
      121 ccgcgaggat cggccccagc gtgagcgccg cccagtacag cagcagccgc ggcccccagc
      181 cgcgcggctg gcgcacgcgc cagatgcggt tcagccggtc ctcgatgctc accatcatcg
      241 agatcgcgct gaacagcatc accaggatgc tgagcccggt gagcttgctg gcgttcgcgg
      301 caaacgcgat cagcgtctcc tgcacgcgct cgccggccgc cggcacgaaa ttggggaaca
      361 cgaaatcaat cagcgtgccg cgcgcctcgg cgaacatcgg aaacgccgcg aacatcgcca
      421 gcaccgccac cgtcagcggc accagcgata ccagcgtggt gtacgacaac gcacccgcgg
      481 tctcgaagca cttgtcgtcg acgaaacgcc gccacaggaa gcggccgaag ctcgtcaggc
      541 gatcgcggtc gaagcgcagt ttcatgggcg atgggccagc ctcgcggaaa tcgcccgtac
      601 actagcgcat tgcctcgatc gcgcccacgc atgtccgacc tgctcgtcct ctactacagc
      661 caccacggcg ccaccgcgca gctcgcccgg ctgatcgcgc gcggcatcga ggaggtgccc
      721 ggcgccgtcg cacgcctgcg ccaggtgccg ccggtggcgc cggtgaccga agtcgcccgc
      781 ccgccggtgc cggaggacgg cgccccgtac gtcagccgtg cggatctcgc gcagtgcagc
      841 ggcctcgcgc tcggcagccc gacccggttc ggcaacatgg ccgcgccact caagtatttc
      901 ctcgacggca ccgccgccga gtgggccagc ggcacgctgg tcggcaagcc ggccgcggtg
      961 ttcacctcga ccaccacgat gcacggcggg caggagtcca cgctgctgtc gatggccctg
     1021 ccgctgctgc atcacggcat gctgctggtc ggcatcccgt tcaccgaacc cgagctcacc
     1081 gccacccaga gcggcggctc gccctacggc gccacccacg tcagcggccc gcacggcgac
     1141 cgcccgatca gcgagcacga gcgcgcgctc gcgcgcacgc ttggccgccg cctcgccgac
     1201 gccgcccgcc ggctcgccac gccatgaacg caccgctgcc gatcgaacag aaactcgggc
     1261 tcgccgcctg ggccgcgctc accctgctgc agccggcgtg gcatggctgg ctgttccccg
     1321 cggccagcct caccgcgacg atgtggatcc tcggtatcgc caccgtgccg ctgctgctgc
     1381 cgctgctcgc gctgcgccgg gtgacgcgcg ccctgctgtg ggtcggcatc ctcgcgctgt
     1441 tctacttctg ccacggcgtc gccgaggcgt ggagcatgcc ggccgaacgc gcgctcgcca
     1501 gcatcgagat cgtgctgacc ctggtgctga tcggcgcgct cggcgccggc gtgcggcaac
     1561 cgcgacggcg gcgcgactaa ccccgcatgc ggcgcccggc cttcacgccg tgcggtctac
     1621 actcgcggtg tcgtcgcatc ggaggctggc catggcattc ctgcagaccg caccgcaact
     1681 cgagcacccg tggcgcagcg aacgcctgct gcacgccatg ctggatcgcg tgctgccggg
     1741 cgagcggcgc gccgcgctgg atgccgacct cgacgccttg ggcgactacg catcgcaggc
     1801 gtggcagcgt gcgcgcggca ccacgccgcg cacgccggtg ctgacccaat gggatgcctg
     1861 gggcgagcgc gtggatcgca tcgagctgac gccggcgtgg caggaaggcg cggcgatcac
     1921 ggcacgccac gcggtactcg ccgccggcca cgaggccagt gaattcgcgc gcctggaaga
     1981 gtttgcgcgc gtctacctct accacgtcgc cagcgagttc tacacctgcc cgctggcgat
     2041 gaccgacggc gccgccacgg cgctgaaagc cgccggcaac caggccttga tcgagcgtgc
     2101 gctgccgcat ttcctcagcc gcgatccggc gacgctgtgg ctgagcgggc aatggatgac
     2161 cgagacccac ggcggctcgg acgtcggcaa caccgaaacc gtcgcgcgcc gcggcgacga
     2221 cgggcaatgg cggctgtacg ggcgcaagtg gttcagctcc gcggtggtcg gcgaggcggc
     2281 gctcgcgctg gcgcggccgg aaggcgcggg aaacggctcg ggcgcgctgg cgctgttcta
     2341 cgtggaaacc gtggacggcg cgcgacgcaa gccggaactc gtcatcgacc gcctgaagga
     2401 caagctgggc acgcgcgagc tgcccaccgc cgagatccat ctcgacggcc tgccggcgtg
     2461 gccggtcggt gagctcgcgc acggcgtgcg ccagattgcg ccggtgctca acatcacccg
     2521 cacctggaac acgatctgcg ccgtggccca catggcacgc gcgatcgcgc tggcgcggga
     2581 ttacgccatg catcgccatg ccttcgcgcg cccgttgatc gagcagccgc tgcacgcgca
     2641 gacgctggcc gacctgcagg ccgagttcga gggcgcgttt gcgctcggct tcgaggtggc
     2701 gcacctgctc ggccgggtcg aacacggcgt ggccgccgca cacgaggtgc agctgctgcg
     2761 cctgctgacg ccgctggcca agctgtggac cggcaaactt gccgtgcgca tctgctccga
     2821 agccctcgaa tgcttcggcg gccagggcta catcgaggac accggcctgc cgcagctcct
     2881 gcgcgacgcg caggtgtacc cgatctggga aggcgccacc aacgtgctgg cgctggatgc
     2941 gctgcgcacg ctcgacggca gcgcgctgat ggcgctgcgc acggcgtgtg cggcatggac
     3001 cgagaatggc gacccgcgtg cggcattcgc gatcgacact gcgttggacg cggtcgaaag
     3061 ccacctcgac ggcgaccgcg accggcttga ggccggcgcg cgcggcgtcg cgctcacgct
     3121 ggcgcgctgc gcgacggcgg cgctgctggc ccgccaggcc acgtggtcgc aggagcgtgc
     3181 cgatgcgcgg ccggccgccg cgctgcgccg tttcctcggc catggcctca cccgcctggc
     3241 cgacaccgag ccggacgaca cccacctgct gctgggctga cgcgcgaagc cgctaaaatg
     3301 gcggcattcc ttcagcggcg catgaccatg caacacctca ccatcgtcac caccggcggc
     3361 accatcgaca agatctattt cgacgacaag tcggactaca agatcggtgc gccgcagatc
     3421 ggcgacatcc tcggccagct cggcgtggcg ttcaccttcg acgtgatccc gatcctgcgc
     3481 aaggacagcc tgcacatcac cgccgaggac cgcgcgctga tccgctccac catcgaggcg
     3541 cagccggcgc gg
//
LOCUS       DASSVL010000314         4526 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_120133, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000314 DASSVL010000000
VERSION     DASSVL010000314.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 4526)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4526)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4526
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_120133"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..466)
                     /locus_tag="VFM52_05460"
     CDS             complement(<1..466)
                     /locus_tag="VFM52_05460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate-dependent dioxygenase"
                     /protein_id="HET8764647.1"
                     /translation="MPATPPLSPQLRDWILATHRAGHDAEAIVALMETHGYAAATYRD
                     AVTQLLHAVAPAPGGLRPRHPSAPRIRIGERVIGVAASLDRPVVRVLTGLLSDGECEE
                     LIALARPRLARALTVDAKGGQQVDQRRTNAGMFFKPAESPLVARIEQRIAELV"
     gene            complement(511..1086)
                     /locus_tag="VFM52_05465"
     CDS             complement(511..1086)
                     /locus_tag="VFM52_05465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007507063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggT family protein"
                     /protein_id="HET8764648.1"
                     /translation="MSYLLNAVALLLGIAFDAVVILFLLRIAAEACRAEFHNPLSQFV
                     YRATNPVLARIRRVVPNWHRINLAAVLVAWVAVLVKRVVLFALMGVMPHLIGLIVLAA
                     AELLDFALLFYLVIVFAWALLSMFAPDPRQPVQRLLNDLADPLVRPLQGRLTLGAIDF
                     SPTVVIIGLLLARLLVAAPLIDLGTRLAIVA"
     gene            complement(1083..1910)
                     /gene="proC"
                     /locus_tag="VFM52_05470"
     CDS             complement(1083..1910)
                     /gene="proC"
                     /locus_tag="VFM52_05470"
                     /EC_number="1.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014403880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004735 - pyrroline-5-carboxylate
                     reductase activity [Evidence IEA];
                     GO_process: GO:0006561 - proline biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroline-5-carboxylate reductase"
                     /protein_id="HET8764649.1"
                     /translation="MTRIAFIGGGNMARSLIGGLLKTGTTAADIRVAEPQAEARERLG
                     REYGVTAWADHRSAVGGADVVVLAVKPQALPKVRSELRAALQGEHPLLISICAGVRLD
                     QLERWLGALPIVRCMPNTPALIGAGATGLVANSRVSPGQKALAQRILDGAGLTRWIER
                     EALMDTVTALSGSGPAYFFALVEALEEAAVRQGLPRDTARSLAAQTCLGAGRMLTESG
                     DDPAELRRRVTSPHGTTQAALESFAADGLAAITARAIAAATRRGGELAEELDREDTP"
     gene            2125..3162
                     /locus_tag="VFM52_05475"
     CDS             2125..3162
                     /locus_tag="VFM52_05475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007507061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043107 - type IV pilus-dependent motility
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus twitching motility protein PilT"
                     /protein_id="HET8764650.1"
                     /translation="MDIAELLAFSVKNKASDLHLSAGLPPMIRVDGDVRRINIPPLEH
                     KEVHSLVYDIMSDKQRHDYEEFLETDFSFEIPGLARFRVNAFTQNRGAGAVFRTIPSE
                     VLSLEDLGCPKVFKDLIEQPQGLILVTGPTGSGKSTTLAAMVDHINKTEYGHMLTIED
                     PIEFVHTSQKCLVNQREVHRDTHGFNEALRSALREDPDFVLVGELRDLETIRLALTAA
                     ETGHLVFATVHTSSAAKTIDRIIDVFPAGEKPMVRSMLSESLRAVVSQSLLKKTGGGR
                     LAAHEIMVAIPAIRNLIREDKVAQMYSAIQTGQQYGMQTLDQCLQDLVKRGLVSRQEA
                     HGYAKNKEMFR"
     gene            3277..4443
                     /locus_tag="VFM52_05480"
     CDS             3277..4443
                     /locus_tag="VFM52_05480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007507060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilT/PilU family type 4a pilus ATPase"
                     /protein_id="HET8764651.1"
                     /translation="MSDFDFTSFLKLMVHKHASDLFITAGVAPSMKIQGRIVPITQSP
                     LSIQQSRDMVLNVMTPSQREEFEKTHECQFAISAQGVGRFRVSCFYQRNCVGMVLRRI
                     ESKIPTIEELNLPPIIKQLAMTKRGIIIFVGATGTGKSTSLASMISYRNQNSTGHIIT
                     IEDPIEYVHKHEGCIITQRELGIDTDSWENALKNTLRQAPDVIMIGEVRTRETMEYAV
                     NFAETGHLCLCTLHANNANQAIERILHFFPEERHQQLFMDLSLNLKGIVAQQLIPTPD
                     GKGRRVAIEILLGTPLVQDYIRQGEIHKLKDVMKESNLLGMKTFDQSLVELYHAGEIS
                     YEDALRHADSANEVRLRIKLAQGGDAHTLSQGLEGVELEESPDSQNFNSNFLNR"
BASE COUNT          789 a         1510 c         1554 g          673 t
ORIGIN      
        1 ctaccagctc ggcgatgcgc tgctcgatcc gcgccaccag cggcgattcg gccggcttga
       61 agaacatgcc ggcattcgtg cgccgctgat ccacctgctg gccgcccttc gcatccaccg
      121 tcagcgcgcg cgccagccgc gggcgggcca gggcgatcag ctcctcgcat tcaccgtcgg
      181 agagcaggcc ggtgagcacg cgcaccaccg ggcgatcgag gctggctgcc acgccgatca
      241 cgcgttcgcc gatccgtatc cgcggcgccg aagggtgccg cgggcgcaga ccgccgggcg
      301 ctggcgccac cgcatgcagc agttgcgtca ccgcgtcgcg gtacgtggcc gccgcgtagc
      361 cgtgggtctc catcagcgcg acgatcgctt cggcatcgtg ccccgcacga tgcgtggcga
      421 ggatccagtc gcggagttgc gggctgagcg gcggcgtggc gggcatcgta ttggcagcgt
      481 ggcagaggtg cggaagctta cgtcacggct tcaggcgacg atcgccagcc gggtgcccag
      541 gtcgatcaac ggcgccgcga ccagcaggcg tgccagcagc agcccgatga tcaccacggt
      601 cggcgagaaa tcgatggcgc cgagggtcaa ccggccctgc aatgggcgca ccagcgggtc
      661 ggccaggtcg ttcagcaggc gctggacggg ctggcgcgga tcgggcgcga acatgctgag
      721 cagcgcccac gcgaagacga tcaccaggta gaacagcagg gcgaagtcga gcagctcggc
      781 ggcggcgagc acgatcagtc cgatgaggtg cggcatgacg cccatcagcg cgaacagcac
      841 cacgcgcttc accagcaccg ccacccacgc caccagcacg gcggcaaggt tgatccggtg
      901 ccagttcggc accacacggc ggatccgcgc cagcaccggg ttggtggcgc gatagacgaa
      961 ctggctgagc gggttgtgga actcggcgcg gcaggcctcg gcggcgatgc gcagcaggaa
     1021 caggatgacg acggcatcga acgcgatgcc gagcagcagg gccacggcgt tgagcaggta
     1081 gctcacgggg tgtcctcccg atccagctcc tcggcgagtt cgccgccgcg ccgggtggcg
     1141 gcggcgatgg cgcgcgcggt gatcgccgcc aggccgtcgg cggcgaagct ttccagcgcg
     1201 gcctgcgtgg tgccgtgcgg cgaggtgacg cggcggcgca gctcggcggg gtcgtcgccg
     1261 ctttcggtca gcatgcggcc ggcgccgagg caggtctgcg cagcgagcga gcgcgcggtg
     1321 tcgcgcggca ggccctggcg cacggcggct tcttccagcg cctcgaccag cgcgaagaag
     1381 tacgcggggc cggagccgga cagcgcggtg acggtatcca tcagcgcttc gcgctcgatc
     1441 cagcgcgtca gcccggcgcc atcgaggatg cgctgcgcca gcgctttctg tccggggctg
     1501 acccggctgt tcgcaaccag cccggtggcg ccggcgccga tcagggccgg tgtgttcggc
     1561 atgcagcgca cgatcggcag ggcacctagc cagcgctcga gctggtccag ccgcacgccg
     1621 gcgcagatcg agatcagcag cgggtgctcg ccctgcagcg cggcacgcag ctcgctgcgc
     1681 accttgggca gcgcctgtgg cttgaccgcg agcacgacga cgtcggcgcc gcccactgcc
     1741 gagcggtggt cggcccatgc ggtcacgccg tactcgcggc cgaggcgttc gcgggcctcg
     1801 gcctgcggct cggcaacgcg gatgtcggcg gcggtggtgc cggttttcag caggccgccg
     1861 atcaggctgc gtgccatgtt gccgccaccg atgaaggcga tgcgtgtcat cgaggaatcc
     1921 gggtagagga gtcgaccgca taccttagcg gaggccggcg gcgatggcgt gccggagctg
     1981 ccgtgaccgg gtgcgcaaag tgcgccgcca agctggccgc gcgcggtgcg ccgcgagtac
     2041 catcgggacg cttgacggcg gcgccgcatg gtcgcgccgc gccgccgttg ccgcgcttgt
     2101 cgacgaccgg tcagggggaa ccgtatggat atcgccgaac tgcttgcctt ctcggtgaag
     2161 aacaaggctt cggatttgca cttgtcggcg ggcctgccgc cgatgatccg cgtggatggc
     2221 gacgtgcgcc gcatcaacat cccgccgctg gaacacaagg aagtgcactc cctggtctac
     2281 gacatcatgt cggacaagca gcgccacgat tacgaggaat tcctggaaac cgacttctcg
     2341 ttcgagatcc ccggcctcgc gcgcttccgc gtcaacgcgt tcacccagaa ccgcggtgcc
     2401 ggcgcggtgt tccgcaccat tccttccgag gtgctgtcgc tcgaagacct cggctgcccg
     2461 aaggtgttca aggacctgat cgagcagccg caggggctga tcctggtcac cgggccgacc
     2521 ggttcgggca agtcgaccac gctggcggcg atggtcgacc acatcaacaa gaccgaatac
     2581 ggccacatgc tgacgatcga ggacccgatc gagttcgtgc acacctcgca gaagtgcctg
     2641 gtgaaccagc gcgaggtgca tcgcgacacg cacgggttca acgaggcgct gcgctcggcg
     2701 ctgcgcgaag acccggactt cgtcctggtc ggcgagttgc gcgacctgga gacgatccgc
     2761 ctggcgctga ccgccgcgga aaccggtcac ctggtgttcg ccaccgtgca taccagctcg
     2821 gccgcgaaga ccatcgaccg catcatcgac gtgttccccg ccggcgagaa gccgatggtg
     2881 cgctcgatgc tgtccgaatc gctgcgcgcg gtggtgtcgc agtcgctgct gaagaagacc
     2941 ggcggcggcc gccttgctgc gcacgagatc atggtggcca tccccgccat ccgcaacctg
     3001 atccgcgagg acaaggttgc gcagatgtac tcggcgatcc agaccggcca gcaatacggc
     3061 atgcagacgc tggaccagtg cctgcaggac ctggtcaagc gcgggctcgt ctcgcgccag
     3121 gaggcgcacg ggtacgcgaa gaacaaggag atgttccggt gacgtggcgg gaatagggaa
     3181 ccaggggtgg ccgaggctgc ccatcccgat gccgcgtgcc gatgcccgag tttggcgttg
     3241 ctgcttttcc tgtttccgaa tcccggactt caagccatga gtgatttcga tttcacctcg
     3301 ttcctcaagt tgatggtgca caagcacgcg tcggatctgt tcatcaccgc cggcgtggcc
     3361 ccgtcgatga agatccaggg gcgcatcgtg ccgatcacgc agagcccgct gtcgatccag
     3421 cagtcgcgcg acatggtgct gaacgtgatg acgccctcgc agcgcgagga gttcgagaag
     3481 acccacgagt gccagttcgc gatctccgcg cagggcgtgg gccgcttccg cgtgtcgtgc
     3541 ttctaccagc gcaattgcgt cggcatggtg ctgcgccgga tcgagtcgaa gatcccgacc
     3601 atcgaggagc tgaacctgcc gccgatcatc aagcagctgg cgatgaccaa gcgcggcatc
     3661 atcatcttcg tcggcgccac cggcaccggc aaatcgacct cgctggcgtc gatgatcagc
     3721 taccgcaacc agaactcgac cggccacatc atcaccatcg aggacccgat tgaatacgtg
     3781 cacaagcacg agggctgcat catcacccag cgcgagctcg ggatcgacac cgacagctgg
     3841 gaaaacgcgc tgaagaacac cctgcgccag gcgccggacg tcatcatgat cggcgaggtg
     3901 cgcacccgcg agacgatgga gtacgcggtc aacttcgccg agaccggcca cttgtgcctg
     3961 tgcacgctgc acgcgaacaa cgcgaaccag gcgatcgagc gcatcctgca cttcttcccg
     4021 gaggaacggc accagcagct gttcatggac ctgtcgctga acctcaaggg catcgtcgcg
     4081 cagcagctga tcccgacgcc ggacggcaag ggccggcggg tggcgatcga gatcctgctc
     4141 ggcacgccgc tggtgcagga ctacatccgc cagggcgaga tccacaaact caaggacgtg
     4201 atgaaggagt ccaacctgct cggcatgaag accttcgacc agagcctggt cgagctctac
     4261 cacgccggcg agatcagcta cgaggacgcg ctgcgccacg ccgacagcgc gaacgaggtg
     4321 cgcctgcgca tcaagctggc ccagggcggc gacgcgcaca cgctgtcgca gggcctggaa
     4381 ggcgtcgagc tggaagaaag ccccgactcg cagaacttca acagcaactt cctcaaccgc
     4441 tgaaacggcc gcaccgtcgg caaaaaaggc gcctgcgggc gcctttttcg ttttggacgt
     4501 tgtcgagcga ggcgtggtgg cctctt
//
LOCUS       DASSVL010000315         7183 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_360762, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000315 DASSVL010000000
VERSION     DASSVL010000315.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 7183)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7183)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7183
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_360762"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            78..1814
                     /locus_tag="VFM52_05485"
     CDS             78..1814
                     /locus_tag="VFM52_05485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015448485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HET8764652.1"
                     /translation="MSFGVHRFFDRLSLNARVVLAIAVVVLGLVILTVFSALQGRRAQ
                     MAGLEHQLQSQVESAIAVAKAYDGRAQKGEFSEAEARKRALAQVLAMRWDQGSGYVFV
                     FGDDYALLSHPVMTDKIGTSVKDMVDQKGQFIFQSMQAVDDKDGSGITHYVWPKPVTK
                     KVVGKLTFSELYKPWNMHFAAGAYYDDIDAVFQHDLLVDLGWAALLALLVTGVVGASI
                     HSIKRSVGGEPRHGVDILGHMAHGELAIEGADALHFLPGSMLHSMRELRHKLIETVGN
                     VQTGASAVATAAREIAKGNDDLSQRTQEQASSLEETAASMEEMTATVKQNAANAGQAD
                     QLARGAREQAERGGEVAGKAVAAMGEITASSKKIADIVNLIDEIAFQTNLLSLNAAVE
                     AARAGEQGRGFAVVAGEVRNLSQRSAEAAKEIKALIKDSVAKVEAGSALVNESGTALN
                     GIVESVKKVTDIVAEIAAASQEQSSGIDQVNRAVMQMDEVTQQNAALVEEASAAAQAM
                     QEQAAELKAQMAFFKLDGGKPEPAAITIRPTPVARTAPHKSASRELAKPAHATRPARP
                     AQGEVAGGWTEF"
     gene            2132..2638
                     /locus_tag="VFM52_05490"
     CDS             2132..2638
                     /locus_tag="VFM52_05490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007080049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheW"
                     /protein_id="HET8764653.1"
                     /translation="MNENRPGAAPTVQQLTFSLAGEEYGVDILAVREIRGWTRVTRIP
                     QAPPYVLGVLNLRGAVVPVMDLRLRFGIERAEYGVNTVMIVVAVEERLFGIVVDAVSD
                     VIDIDPAAIQPVPDMGAIVDTRYLKGLATHVERMVMLLDVEKLMRPDEVESIEVAVSE
                     VNEVEVAA"
     gene            2652..4376
                     /locus_tag="VFM52_05495"
     CDS             2652..4376
                     /locus_tag="VFM52_05495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008439024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HET8764654.1"
                     /translation="MNFNKLVSNLAKFSALSVKARLAGVLGLLCVMLIAGAAVGLGMM
                     SWQNDNARKSYEDGMVPSQLMANLRRDSLMNFIVLGEAANTIGKADQVKQKVAESQKL
                     QQDIVDTDKKLAPIQLSAAVAEKYKAYHATDADYQSGLKDVYDALNQGDDGARDLLEM
                     EVRPALMMRIDALSKLASTQNEEVGQAYQAQLKRYQVVRVVVLLALLAGLAFAAVVSY
                     LLVRSLMGTLKHLGTVASDIAEGRIGHRIEVKRHDELGRLLHAFKVMDERLGTIVGQV
                     REGSDAVSSAAQQIAKGNDDLSQRTQEQASSLEETASSMEEMTSTVKQNAENASHANH
                     LARGAREQAERGGEVAHKAVAAMAEIDASSRKIGDIVGLIQDIAFQTNLLALNAAVEA
                     ARAGEQGRGFAVVAGEVRNLAQRSAEAAKEIKGLIATSEEKVKAGSELVNESGKALAE
                     IVDSVKKVTDIVAEIAAASQEQSAGIDQVNNAVTQMDEVTQQNAALVEEASAAARAMQ
                     DQAGELAQQVGFFHLLDGGTAQAEQRERAQRQEVVQATEQVLAAVRDKPAPRLVAETS
                     AADAWKEF"
     gene            4486..5373
                     /locus_tag="VFM52_05500"
     CDS             4486..5373
                     /locus_tag="VFM52_05500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015448482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008983 - protein-glutamate
                     O-methyltransferase activity [Evidence IEA];
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_process: GO:0032259 - methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein-glutamate O-methyltransferase CheR"
                     /protein_id="HET8764655.1"
                     /translation="MHAAIAQVSGDAAPAGAPGTATLGDREFAFLRDFVYQHLGIALS
                     GHKRQLVQGRLARRLRKLRLPDYAAYCDLLRADKDGELGELASVISTNVTAFFREPHH
                     YELLENELLPQWLDRKRRDGDRLRIWSAGCSSGEEPYAIAMVLAEALEKAGAAHLDAK
                     ILATDLSPQVLETARAGVYAIDKLGGISAERRHRWLLRGAGANEGYVRVHPRLRELVT
                     VQPLNLLHDWPMKGPFDAIFCRNVVIYFDTPTKKRLFSRYAALLPAGGYLFLGHSESM
                     HGINDDFELVGRTAYRKKA"
     gene            5370..6023
                     /gene="cheD"
                     /locus_tag="VFM52_05505"
     CDS             5370..6023
                     /gene="cheD"
                     /locus_tag="VFM52_05505"
                     /EC_number="3.5.1.44"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015448481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050568 - protein-glutamine glutaminase
                     activity [Evidence IEA];
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chemoreceptor glutamine deamidase CheD"
                     /protein_id="HET8764656.1"
                     /translation="MSQPAVAERRRVAQPLQPLPGFEHLHRFWDPNQACTVVKILPGE
                     FYVSREDEQVGTVLGSCVSACIHDPVRHLGGMNHFMLPEPKGAGDSWSVANGRAARYG
                     SEAMEQLINALIKAGSRREDFSIKLFGGGRVLAQMTDVGKRNIEFVHRYLATEALRVV
                     AEDLGDVYPRQVQFYPQSGRVRVRQLRRQGDAALVAGESSYLKQLANDPIQGEVELF"
     gene            6080..7171
                     /locus_tag="VFM52_05510"
     CDS             6080..7171
                     /locus_tag="VFM52_05510"
                     /EC_number="3.1.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015448480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0008984 - protein-glutamate methylesterase
                     activity [Evidence IEA];
                     GO_function: GO:0050568 - protein-glutamine glutaminase
                     activity [Evidence IEA];
                     GO_process: GO:0006482 - protein demethylation [Evidence
                     IEA];
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA];
                     GO_process: GO:0018277 - protein deamination [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis response regulator protein-glutamate
                     methylesterase"
                     /protein_id="HET8764657.1"
                     /translation="MERVRVLVIDDSALVRKMLSAMLAADPQIEVVGTAPDPLVAREK
                     IKQLNPDVLTLDVEMPRMDGITFLENLMRLRPMPVVMVSTLTTAGADVTLRALEMGAV
                     DFYAKPNSDLAATFGDSAQELCTKVKHAALAKPRQRATVHRLEVAPRLSADAVLPRVQ
                     TPGSRGGSPIIAIGASTGGTEAIRVVLEMMPPDAPPILVTQHIPAQFSGPFAERMNRC
                     SAMRVCEAQDGQPIQAGHAYIAPGSHHLLMMWDGAKFVCRLHDGPPVNRHRPSVDVLF
                     RSMAASAGAATVAALLTGMGDDGARGLLELRQTGAKTVVQDEASSVVWGMPGAAWKLG
                     AAPEMQAIDAMASRLLTLAHHPHVAAGGA"
BASE COUNT         1211 a         2389 c         2593 g          990 t
ORIGIN      
        1 agctgccgcg aggggatcga cgtgcgccgt tcgtcccggc ctccatcgag gccgggccat
       61 tgcacttgag gtgcgacatg tcttttggcg ttcatcgttt ttttgatcgg ctcagtctca
      121 atgcgcgcgt ggtcctcgcg atcgccgtcg tcgtgctggg gctggtgata ctcactgtgt
      181 tcagcgccct gcagggccgg cgtgcgcaga tggccgggct cgaacaccag ttgcagagcc
      241 aggtggaatc ggcgatcgcg gtggccaagg cgtacgacgg gcgcgcgcag aagggcgagt
      301 tcagcgaggc cgaggcgcgg aagcgcgcgc tggcccaggt gctggcgatg cgctgggacc
      361 agggttccgg ctacgtgttc gtgttcggcg acgactacgc cctgctgtcg cacccggtga
      421 tgaccgacaa gatcggcacc agcgtcaagg acatggtcga ccagaagggg cagttcatct
      481 tccagtcgat gcaagcggtg gacgacaagg acggcagcgg catcacgcac tacgtgtggc
      541 cgaagccggt gacgaagaag gtcgtcggca agctgacctt cagcgaactg tacaagccgt
      601 ggaacatgca cttcgccgcc ggcgcgtact acgacgacat cgacgcggtg ttccagcacg
      661 acctgctggt ggacctcggc tgggccgcac tgctcgcgct gctggtgacc ggcgtcgtcg
      721 gcgcgtcgat ccacagcatc aagcgcagcg tcggcggcga gccgcggcac ggcgtcgaca
      781 tcctcggcca catggcgcac ggcgagctgg cgatcgaggg cgcggacgcg ctgcatttcc
      841 tgcccggcag catgctgcat tcgatgcgcg agctgcggca caagctgatc gagaccgtgg
      901 gcaacgtgca gaccggcgcc agcgccgtgg cgaccgcggc gcgggaaatc gcgaaaggca
      961 acgacgacct gtcgcagcgc acccaggagc aggcgtcgag cctggaggaa accgcggcgt
     1021 cgatggaaga gatgacggcg acggtgaagc agaacgcggc caacgccggg caggccgatc
     1081 agctggcgcg cggggcgcgc gagcaggccg agcgcggcgg cgaagtcgcc ggcaaggcgg
     1141 tggcggcgat gggcgagatc acggcgtcga gcaagaagat cgccgacatc gtgaacctga
     1201 tcgacgagat cgcattccag accaacctgc tgtcgctcaa cgccgcggtg gaagccgcgc
     1261 gcgccggcga acagggccgc ggctttgccg tggtcgcggg cgaggtgcgc aatctttccc
     1321 agcgcagcgc cgaggccgcg aaggagatca aggcgctgat caaggacagc gtggcgaagg
     1381 tcgaggccgg cagcgcgctg gtgaacgaat ccgggacggc gctgaacggc atcgtcgaga
     1441 gcgtgaagaa agtgaccgac atcgtcgcgg agatcgcggc ggcgagccag gagcagtcga
     1501 gcgggatcga ccaggtgaac cgcgcggtga tgcagatgga cgaggtcacc cagcagaacg
     1561 cggcgctggt cgaggaagcc tcggcggcgg cgcaggcgat gcaggaacag gccgccgagc
     1621 tcaaggcgca gatggcgttc ttcaagctgg acggcggcaa gcccgagccg gcggcgatca
     1681 cgatccggcc gacgccggtc gcgcgcacgg cgccgcacaa gtccgcctcg cgcgagctgg
     1741 cgaagccggc gcacgcaacg cgtcccgcca ggccggcgca gggcgaggtg gcaggcggct
     1801 ggaccgagtt ctgacgcctc accgcggccg gcggtgcggc cgctgatgac gatgccggcg
     1861 caggctgccc attggcgcgg gcggctctgc gccggcaccg tcatcgcttg atggccgcgc
     1921 gcggcgcggc gtccgatccc tgcgccacgc cggtgccacg ccaacgtccg gttcgtcgcc
     1981 ggcgcatggc ggccgcgcca catgccgccg cgtacgccgc cgcgatcacc ggcgcggcgc
     2041 gcacccggcg ttccgctcaa gtccacctgc cgggcgccga taccgtcctc gtcaaaggcg
     2101 tccagcgatg ccgatcacga ggtagccatc catgaacgaa aacaggcccg gcgcggcgcc
     2161 caccgtgcag cagctcacct tcagcctcgc gggcgaggag tacggcgtcg acatcctggc
     2221 ggtgcgcgag attcgcggct ggacgcgcgt cacccgcatc ccgcaggcgc cgccgtacgt
     2281 gctgggtgtg ctgaacctgc gcggcgcggt ggtgccggtg atggatctgc gcctgcgctt
     2341 cggcatcgag cgcgcggagt acggcgtcaa cacggtgatg atcgtggtcg ccgtcgagga
     2401 gcggctgttc ggcatcgtgg tggatgcggt gtccgacgtg atcgacatcg acccggcggc
     2461 gatccagccg gtgcccgaca tgggcgccat cgtcgatacc cgctacctca aggggctcgc
     2521 cacccacgtc gagcgcatgg tgatgctgct cgacgtcgaa aagctgatgc gcccggacga
     2581 ggtcgagtcg atcgaggtcg ccgtgtccga agtcaatgaa gtcgaagttg ctgcctgaac
     2641 ggggatcacc aatgaatttc aacaagctgg tatcgaacct ggcaaagttt tccgcgctgt
     2701 cggtcaaggc gcggctggcc ggtgtgctgg gcctcctgtg cgtgatgctg atcgccggcg
     2761 cggccgtcgg cctcggcatg atgagctggc agaacgacaa cgcgcgcaag agctacgagg
     2821 acggcatggt gccgtcgcag ctcatggcca acctgcgccg cgactcgctg atgaacttca
     2881 tcgtgctcgg cgaggcggcg aacaccatcg gcaaggccga ccaggtcaag cagaaggtgg
     2941 ccgagtcgca gaagctccag caggacatcg tcgacaccga caagaagctg gcaccgatcc
     3001 agctcagcgc ggcggtagcc gagaagtaca aggcctatca cgccaccgac gccgactacc
     3061 agagcgggct caaggacgtc tacgacgcgc tcaaccaggg tgacgacggt gcgcgcgacc
     3121 tgctggaaat ggaggtgcgc ccggcgctga tgatgcgcat cgacgccttg agcaagctgg
     3181 cgagcacgca gaacgaggaa gtgggccagg cctaccaggc gcagctcaag cgctatcagg
     3241 tcgtgcgcgt ggtggtgctg ctcgcgctgc ttgccggcct cgcgttcgcc gccgtggtct
     3301 cgtacctgct ggtgcgctcg ctgatgggca cgctcaagca cctgggcacg gtcgccagcg
     3361 acatcgccga gggccgcatc ggccaccgca tcgaggtcaa gcgccacgac gagctgggcc
     3421 gcctgctgca cgcgttcaag gtgatggacg agcgcctcgg cacgatcgtc ggccaggtgc
     3481 gcgagggttc cgacgcggtg tcgagcgccg cgcagcagat cgcgaagggc aacgacgatc
     3541 tctcgcagcg cacccaggag caggcgtcga gcctggagga aaccgcctcg tcgatggagg
     3601 agatgacctc caccgtgaag cagaacgcgg agaacgcgag ccacgcgaac cacctggcgc
     3661 gcggcgcgcg cgagcaggcc gaacgcggcg gcgaggtggc gcacaaggcg gtggcggcga
     3721 tggccgagat cgatgcgtcg agccgcaaga tcggcgacat cgtcgggctg atccaggaca
     3781 tcgcgttcca gaccaacctg ctggcgctga acgccgcggt cgaggccgcg cgcgccggcg
     3841 agcagggccg cggcttcgcg gtcgtcgccg gcgaggtgcg caacctcgcc cagcgcagtg
     3901 ccgaggcggc gaaggagatc aagggcctga tcgccaccag cgaggagaag gtgaaagccg
     3961 gctccgagct ggtcaacgag tcgggcaagg cgctggcgga aatcgtcgac agcgtgaaga
     4021 aggtgaccga catcgtggcc gagatcgcgg ccgccagcca ggagcagtcg gccggcatcg
     4081 accaggtgaa caacgcggtg acgcagatgg acgaggtcac ccagcagaac gcggcgctgg
     4141 tcgaggaggc ctcggccgcg gcgcgcgcga tgcaggacca ggcgggcgag ctggcgcagc
     4201 aggtcggttt cttccacctg ctcgacggcg gcaccgccca ggccgaacag cgcgagcgcg
     4261 cgcagcgcca ggaagtggtg caggcgaccg agcaggtgct ggccgccgtg cgcgacaagc
     4321 cggcaccgcg cctggtggcg gaaaccagcg cggccgacgc ctggaaggag ttctgagcca
     4381 ttgcggtgcg tcgcgaggtg atcgtggcgc gccgcggccc ggcacgcagg ccgcaccggg
     4441 gcggccggtt gaatgcgccg ctggcgacgc acgaggagtc tggacatgca tgcagccatc
     4501 gcgcaggtat ccggtgacgc cgcgccggcg ggcgcgcccg gcacggcgac gctcggcgac
     4561 cgcgagttcg cgttcctgcg cgacttcgtc taccagcacc tcggcatcgc gctcagcggg
     4621 cacaagcgcc agctggtgca gggccggctg gcgcgccgcc tgcgcaagct gcggctgccc
     4681 gactacgccg cgtactgcga cctgctgcgc gcggacaagg atggcgagct gggcgagctg
     4741 gccagcgtca tcagcaccaa cgtcaccgcg ttctttcgcg agccgcacca ttacgagctg
     4801 ctggaaaacg agctgctgcc gcagtggctc gaccgcaagc gccgcgacgg cgaccgcttg
     4861 cgcatctggt cggccggctg ttcttccggc gaggagccgt acgcgatcgc catggtgctg
     4921 gccgaggcgc tggagaaggc cggcgccgcg cacctggacg cgaagatcct tgccaccgac
     4981 ctgtcgccgc aggtgctgga aaccgcgcgc gccggcgtgt acgcgatcga caagctcggc
     5041 ggcatcagcg ccgagcgccg gcaccgctgg ctgctgcgcg gtgccggcgc gaacgaaggc
     5101 tacgtgcgcg tgcatccgcg cctgcgcgag ctggtcaccg tgcagccact gaatcttctg
     5161 cacgactggc cgatgaaggg accattcgac gcgattttct gccgcaacgt ggtgatctat
     5221 ttcgacacgc cgacgaagaa gcgcctgttc agccgctatg ccgcgctgct gccggccggc
     5281 ggctacctgt ttctcggcca ctccgagtcg atgcacggca tcaatgacga cttcgagctg
     5341 gtcgggcgca ccgcgtaccg gaagaaagca tgagccagcc tgccgtcgcc gaacgtcgcc
     5401 gtgtcgcgca acccctgcag ccgctgccgg ggttcgagca cctgcaccgg ttctgggacc
     5461 cgaaccaggc ctgcacggtg gtcaagatcc tgcccggcga gttctacgtc agccgtgagg
     5521 acgagcaggt cggcaccgtg ctcggttcct gcgtctcggc gtgcatccat gacccggtgc
     5581 gccacctcgg cggcatgaac cacttcatgc tgcccgagcc caagggcgcc ggcgacagct
     5641 ggtcggtggc caacggccgc gccgcgcgct acggctcgga ggcgatggag cagctcatca
     5701 acgcgctgat caaggccggc agccggcgcg aggacttcag catcaagctg tttggcggcg
     5761 ggcgcgtgct tgcgcagatg accgacgtcg gcaagcgcaa catcgagttc gtgcaccgct
     5821 acctcgccac cgaggcgctg cgcgtggtgg ccgaggacct cggcgatgtc tacccgcgcc
     5881 aggtgcagtt ctacccgcag agcggccggg tgcgcgtgcg ccagttgcgc cgccagggtg
     5941 acgccgcgct ggtggccggc gagtcgagct acctcaagca gctcgcgaat gatccgatac
     6001 agggtgaggt cgagctgttt tgacgccggg caaccgggtt cgggtgatgg ccgcggtggc
     6061 cgcaggtgga aggtgagtga tggaacgagt gcgcgtcctg gtcatcgatg attccgccct
     6121 ggtgcggaag atgctgtcgg ccatgctcgc cgccgatccg cagatcgagg tcgtcggtac
     6181 cgcgcccgat ccgctggtgg cgcgcgagaa gatcaagcag ctcaaccccg acgtgctcac
     6241 cctggacgtc gagatgccgc gcatggacgg catcaccttc ctcgaaaacc tgatgcgcct
     6301 gcgcccgatg ccggtggtga tggtgtccac gctgaccact gccggcgccg acgtcacgct
     6361 gcgcgcgctg gagatgggcg cggtggattt ctacgccaag cccaacagcg acctcgccgc
     6421 gacgttcggc gacagcgcgc aggagctgtg caccaaggtg aagcacgcgg cgctggccaa
     6481 gccgcgccag cgcgccaccg tgcaccgcct cgaggtcgcg ccacggctca gcgcggatgc
     6541 ggtgctgccg cgggtgcaga cgccgggctc gcgcggcggc agcccgatca tcgcgatcgg
     6601 cgcgtccacc ggcggcaccg aggcgatccg cgtggtgctg gaaatgatgc cgccggacgc
     6661 gccgccgatc ctcgtcaccc agcacatccc ggcgcagttc agcgggccgt ttgccgagcg
     6721 catgaaccgc tgctcggcga tgcgcgtgtg cgaggcacag gacggccagc cgatccaggc
     6781 cggccacgcc tacatcgccc ccggcagcca tcatctcctg atgatgtggg acggcgcgaa
     6841 gttcgtctgc cgcctgcacg acggcccgcc ggtcaaccgc catcgcccga gcgtggacgt
     6901 gctgttccgc tcgatggcgg ccagcgccgg cgccgcgacc gtggccgcgc tgctcaccgg
     6961 catgggcgac gacggtgcac gcggcctgct cgaattgcgc cagaccggcg ccaagaccgt
     7021 ggtgcaggac gaggccagct cggtggtctg gggcatgccc ggcgccgcgt ggaaactcgg
     7081 cgccgccccg gaaatgcagg ccatcgacgc catggcgtcg cgcctgctga cgcttgccca
     7141 tcatccccac gtcgccgccg gcggcgcctg atccacggac ttt
//
LOCUS       DASSVL010000316         5604 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1292869,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000316 DASSVL010000000
VERSION     DASSVL010000316.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 5604)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5604)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5604
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1292869"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1246
                     /locus_tag="VFM52_05515"
     CDS             <1..1246
                     /locus_tag="VFM52_05515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017461038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="retroviral-like aspartic protease family
                     protein"
                     /protein_id="HET8764658.1"
                     /translation="ASALIALALVGPVAFALPTASDDQALVAQVRQAVQAADVPALAA
                     TYRAPSDAAARALAAMALERIHGNYAASSADAAVCERALFDTRPNLAFFCAMFANGNQ
                     RLAVGTAVATPAEAAIATRFAGHVAPARLAAIHAYVAEHAGAPAFRVDLPATDFTLPL
                     VHLPGDDRGALEVKAGDAGARLVVDTGAGFPIVDAPTAKRLGVRLLGRKLATNGFASR
                     GVALEAGVLGRLAIGPVTLHNVPVAVGATRVNLIGLDVLRHLGAFRISRGAITVYRTA
                     ATQPACNEPLLLAGDILGHSVRATVALPIDGRLQTTLIDTGNSAYLAGDKATLDDLAL
                     SYGHRVGMRDISGRLHASRVGQANATVQLAGHAINLTFGVFEDASLPWHYVLGSGALA
                     DMDFYFDFPGRHSCQLPHANLH"
     gene            complement(1248..2921)
                     /gene="asnB"
                     /locus_tag="VFM52_05520"
     CDS             complement(1248..2921)
                     /gene="asnB"
                     /locus_tag="VFM52_05520"
                     /EC_number="6.3.5.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007808915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004066 - asparagine synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006529 - asparagine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine synthase B"
                     /protein_id="HET8764659.1"
                     /translation="MCGIFGMFDLQPGDDAVALRRQALDLSRRQRHRGPDWSGVFADD
                     GAILVHERLAIVDPASGAQPLRSPDGTLALAVNGEIYNHQALRGQTRYAFTTGSDCEV
                     INALYASGVTDFVNQLNGIFAFVLWDAAQQRYLAARDPIGVCPLYWGHDAKGRTCFAS
                     EMKVLVGVCADVAEFPPGHVYDSKVGKLVKYYAKPWREFSAVTGHTLAPADLRKAFEA
                     TVHRQMMTDVPYGVLLSGGLDSSLVAACAAKFSRERIEDADRSEAWWPRLHSFSIGLE
                     GSPDLAAAEVAAKALGTVHHGFHYTFEEGLDALPEVIRHIETYDVTSIRASTPMFLLA
                     RRIKAMGVKMVLSGEGSDEIFGGYLYFHKAPNAQAFHEETVRKLDALHAYDCLRANKS
                     MLAWGVEARVPFLDLEFIDVAMGMDPQQKMAGHGRIEKHILREAFEGSLPKEILWRQK
                     EQFSDGVGYGWIDGLKAHAEQAVSDREMAAAASRFPFNTPDTKEGYFYRTIFEKFFPG
                     DACAATVPGGKSVACSTPAAIAWDPSFASMADPSGRAVKGVHEHALAAL"
     gene            complement(3208..4953)
                     /gene="recJ"
                     /locus_tag="VFM52_05525"
     CDS             complement(3208..4953)
                     /gene="recJ"
                     /locus_tag="VFM52_05525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007808925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008297 - single-stranded DNA
                     exodeoxyribonuclease activity [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded-DNA-specific exonuclease RecJ"
                     /protein_id="HET8764660.1"
                     /translation="MASLAHLAQAATLSALTLRRRELQGEPTGWDAAVHPVLQRVYAA
                     RGVFGPAGVEHRLQRLLPPQTLGGLETATDLLAAAIRAGAHILIAGDYDCDGATGTTV
                     AVRGLRMLGAARVSYAVPNRFVHGYGLTPALVDSLSPRPDLIVTVDNGVASVAGVARA
                     HALGMQVIVTDHHLPGGQLPACDAMVNPNLAGDAFPSKALAGVGVMFYLLLALRAKLR
                     AQGAFGGGDPDLSSLLDLVALGTVADLVPLDFNNRVLVAAGLRRIRSGRAHAGIAALV
                     ACGKRSLATLCSSDLGFAVGPRLNAAGRLEDMHLGIECLLADDAGTAQRLAGELDAIN
                     HARRDLQASMVAEAETMVAGVGDNGATGVALYEPSWHAGVVGLVASKLKDRLHRPVIA
                     FAPANDDNPQQLRGSGRSIAGFHLRDALALIDAREPGLIERFGGHAMAAGLSLPAAHY
                     APFAVAFDHVACDLIAPEHLQAALYTDGELAAGEFSLDLARQLRDAGPWGQGFAPPVF
                     DGVFDCASWKRMGENHWRLALRDPRDGAAHDAVMFNVGAAMPPARLRAAFELVVNDWQ
                     GRESPRLLLRHVEPA"
     gene            complement(4914..>5604)
                     /locus_tag="VFM52_05530"
     CDS             complement(4914..>5604)
                     /locus_tag="VFM52_05530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="phosphoglycerate mutase"
                     /protein_id="HET8764661.1"
                     /translation="AEPAWAFADINGVRLMACGSLAVSAEEAAALVATVAPLFAEVGM
                     ELLAATPTQWQLRATPGAALPELAAPEQALGEDLFLHLPKGDAGKRWRILFNDVQMAL
                     HEHPVNLARKRRGETVVNTVWPWGAGQLPAKVTANVAGVVGTEPLLVALAAGAGIQRQ
                     PLSPEAVASAGAGWLVDLQGLAAGEFEHAWWPGMQAAMARRPLRIVFGSGECWAWHPW
                     HRWRIWRRPPR"
BASE COUNT          849 a         2049 c         1907 g          799 t
ORIGIN      
        1 cgccagcgcc ctcatcgccc tcgcactcgt cggccccgtc gcatttgcat tgcccacggc
       61 cagcgacgac caggcactgg ttgcgcaggt gcgccaggcc gtgcaggccg ccgacgtgcc
      121 ggcgctggcc gcgacgtacc gcgcacccag cgacgccgcg gcgcgcgccc tggccgcgat
      181 ggcgctggaa cgcatccacg gcaactacgc ggcgtccagc gccgatgccg cggtgtgcga
      241 acgcgcgttg ttcgacaccc gccccaatct cgccttcttc tgcgccatgt tcgccaacgg
      301 caaccagcgg ctggccgtcg gtacggccgt ggcgacgccg gccgaggcgg ccatcgccac
      361 gcgcttcgcc ggccacgttg caccggctcg gctggcggcg atccacgcct acgtggccga
      421 acacgccggc gccccggcct tccgtgtcga cctgccggcg acggatttca cgctgcccct
      481 ggtgcacctg ccgggcgacg atcgcggggc gctggaggtg aaggccgggg acgcgggcgc
      541 gcggctggtg gtggacaccg gcgccggctt tcccatcgtc gatgcgccca cggccaagcg
      601 gctgggcgtg cgcctgctcg gccgcaagtt ggcgaccaac ggcttcgcgt cgcgcggcgt
      661 ggcgctggaa gccggcgtgc tcggccgcct cgccatcggc ccggtcaccc tgcacaacgt
      721 gccggtcgcc gttggcgcca cgcgcgtgaa cctgatcggc ctcgacgtgc tcaggcacct
      781 gggcgcgttc cgcatttcgc gcggggcgat caccgtctac cgcacggccg ccacgcaacc
      841 cgcctgcaac gaaccgctgc tgctggccgg cgacatactg ggccactccg tgcgcgccac
      901 cgtcgccctg ccgatcgatg gccgcctgca aaccacgctg atcgacaccg gcaactcggc
      961 gtacctggcc ggcgacaagg ccacgctcga cgacctcgcg ctgagctacg gccaccgcgt
     1021 cggcatgcgc gacatcagcg ggcgcctgca tgcgtcgcgc gtcggccagg cgaacgccac
     1081 cgtgcagctg gccggtcatg cgatcaacct cacgttcggc gtgttcgagg acgcgtcgct
     1141 gccctggcac tacgtgctgg gcagcggcgc gctggccgac atggatttct acttcgactt
     1201 ccccggccgg cacagctgcc agctgccgca cgccaacctg cactgagtca gagcgcggcc
     1261 agcgcgtgct cgtgcacgcc cttcaccgcg cggcccgagg ggtcggccat gctggcgaaa
     1321 ctcggatccc acgcgatcgc cgccggcgtc gagcaagcca ccgacttgcc gcccggcacc
     1381 gtcgccgcgc aggcatcgcc ggggaagaac ttctcgaaga tcgtgcggta gaaatagcct
     1441 tccttggtat cgggcgtgtt gaacgggaag cgcgacgccg cggcggccat ttcgcgatcg
     1501 ctaacggcct gctcggcgtg cgccttcaag ccgtcgatcc agccgtagcc cacgccgtcg
     1561 ctgaactgct ccttctgccg ccacaggatt tccttgggca gcgagccctc gaatgcctcg
     1621 cgcaggatgt gcttctcgat cctgccgtgg ccggccatct tctgttgcgg gtccatgccc
     1681 atggccacgt cgatgaattc cagatcgaga aacggcacgc gcgcttccac gccccaggcc
     1741 agcatcgact tgttcgcgcg caggcagtcg taggcgtgca acgcatccag cttgcgcacg
     1801 gtttcctcgt ggaacgcctg cgcattcggc gccttgtgga agtacagata gccgccgaag
     1861 atttcgtccg agccctcgcc cgagagcacc atcttcacgc ccatcgcctt gatccgccgc
     1921 gcgagcagga acatcggcgt ggaggcgcgg atgctggtga cgtcgtaggt ctcgatgtgg
     1981 cggatcacct cgggcaatgc atccagccct tcctcgaagg tgtagtggaa accgtggtgc
     2041 acggtgccca gcgccttggc ggcgacttcc gcggcggcga gatcgggcga gccttccagc
     2101 ccgatcgaga acgagtgcag gcgcggccac caggcctcgc tgcggtcggc gtcctcgatg
     2161 cgctcgcgcg agaacttcgc ggcgcaggcg gcaaccagcg aggagtccag cccgccggaa
     2221 agcagcacgc catacggcac gtcggtcatc atctgccgat gcacggtggc ctcgaacgcc
     2281 ttgcgcaagt cggccggcgc caacgtgtgg ccggtgacgg cggagaactc gcgccacggc
     2341 ttggcgtagt acttcaccag cttgccgacc ttgctgtcgt acacatggcc gggcgggaat
     2401 tccgcgacgt ccgcgcacac gcccaccagc actttcatct ccgaggcgaa gcacgtgcgg
     2461 cccttggcgt cgtggcccca gtacagcggg cacacgccga tcggatcgcg cgcggcgagg
     2521 tagcgctgct gcgccgcgtc ccacagcacg aaggcgaaga tgccgttgag ctggttgacg
     2581 aagtcggtga cgcccgacgc gtacagcgcg ttgatgactt cgcaatccga gccggtggtg
     2641 aacgcgtacc ttgtctgccc gcgcagcgcc tggtggttgt agatctcgcc gttcaccgcc
     2701 agcgccagcg tgccatccgg cgaacgcagt ggctgtgcgc cggaggccgg gtcgacgatg
     2761 gcgaggcgct cgtgcaccag gatcgcgccg tcgtcggcaa acacgccgct ccagtccggg
     2821 ccgcgatggc gctggcggcg cgacaggtcc agcgcctggc ggcgcaaggc cacggcgtcg
     2881 tcgccgggct gcaggtcgaa cattccgaaa atgccgcaca tggttttttg ccttgtcgtg
     2941 gtggatgaaa agcacaaaaa aaccggggcc cgcttttggc gggccccggt tcgcgtgtct
     3001 gtggtgaaac gtgcagctac gcgcgggccc gccaacggtt ggcgttattg ttcgcgcggt
     3061 tgttgttcac ggccacggcg ccatgccgcg acgaggtcgc ggtgacgaaa gcggtggcgg
     3121 cggaggtgaa cgacatgccg ccgagttgaa cagatgcggc ggccgcgcgc aagtgacgat
     3181 ttcgcatgag ccgtctggac ggccggatca agccggctcg acgtggcgca gcagcaggcg
     3241 tggcgactcc cggccctgcc agtcgttcac caccagctcg aatgcggcgc gcagccgggc
     3301 gggcggcatc gcggcgccga cgttgaacat caccgcgtcg tgcgcggcac cgtcacgcgg
     3361 gtcgcgcagc gcgagccgcc agtggttctc gcccatgcgt ttccagctcg cgcaatcgaa
     3421 cacgccgtcg aacaccggcg gcgcgaagcc ctgcccccat ggcccggcgt cgcgcaactg
     3481 gcgcgcgagg tcgagcgaaa actcccctgc cgccaactcg ccgtcggtat acagcgcggc
     3541 ctgcaggtgt tccggcgcaa tgaggtcgca ggccacgtga tcgaaggcga cggcgaacgg
     3601 cgcgtaatgc gcggccggca ggctgagccc ggccgccatc gcatgcccgc cgaagcgctc
     3661 gatcaggccg ggttcgcgcg cgtcgatcag cgccagcgca tcgcgcaggt ggaagccggc
     3721 gatcgagcgg ccggagccgc gcagttgttg cgggttgtcg tcgttcgccg gcgcgaaggc
     3781 gatcaccggg cgatgcaggc gatccttaag cttcgacgcc accaggccga ccacgccggc
     3841 atgccacgac ggctcgtaca gcgccacgcc ggtggcgccg ttgtcgccga cgccggccac
     3901 catggtttcc gcctcggcca ccatcgacgc ctgcaggtcg cgccgcgcgt ggttgatcgc
     3961 gtccagctcg ccggccaggc gctgcgcggt gccggcatcg tcggccagca ggcattcgat
     4021 gccgaggtgc atgtcttcga gccgcccggc cgcgttgagg cgcggaccga cggcaaagcc
     4081 gagatccgac gaacacagcg tggcgaggct gcgcttgccg caggcgacca gcgccgcgat
     4141 gccggcatgc gcgcgcccgc tgcggatgcg ccgcaggccg gcagcgacca gcacgcggtt
     4201 gttgaaatcc agcggcacca ggtcggccac ggtgccgagc gcgacgaggt cgagcaggct
     4261 ggacagatcc gggtcgccgc cgccgaacgc gccttgcgcg cgcagcttcg cgcgcagcgc
     4321 gagcaacagg tagaacatca cgccgacgcc ggccagcgcc ttgctcggga aggcatcgcc
     4381 ggcgaggttc gggttgacca tcgcatcgca cgccggcaac tgcccgcccg gcagatggtg
     4441 gtcggtgacg atcacctgca tgcccagcgc atgcgcccgc gccacgccgg caacgctggc
     4501 gacgccgttg tccacggtga cgatgaggtc cggccgcggc gacagcgaat cgaccagcgc
     4561 cggcgtcagc ccgtagccgt gcacgaagcg gttgggtacc gcgtaggaaa cccgcgccgc
     4621 gcccagcatg cgcaggccgc gcaccgccac cgtggtgccg gtggcgccgt cgcagtcgta
     4681 atccccggca atcaggatgt gcgccccggc acggatcgcc gcggccagca ggtcggtcgc
     4741 ggtttccagc ccaccgagcg tctgcggcgg caacaggcgc tgcaggcgat gttcgacgcc
     4801 ggccggcccg aacacgccac gcgccgcata cacgcgctgc agcaccggat gcacggcggc
     4861 gtcccacccc gtcggctcgc cctgcagctc ccgccggcgc agggtcaacg cactcaacgt
     4921 ggcggcctgc gccagatgcg ccagcgatgc cacgggtgcc acgcccagca ttcgccgctg
     4981 ccgaacacga tgcgcagcgg gcgccgcgcc atcgccgcct gcatgcccgg ccaccacgcg
     5041 tgttcgaact cgccggcagc gaggccctgc aggtcgacca gccaacctgc gcccgctgac
     5101 gccacggcct ccggcgacaa cggctgccgt tggatgccgg cgccggccgc cagtgccacg
     5161 agcagcggct ccgtgccgac gacgccggca acgttcgccg tgaccttcgc tggcaactgg
     5221 ccggcgcccc acggccacac cgtgttgacc acggtttcgc cgcgccgctt gcgcgcgagg
     5281 ttcaccgggt gctcgtgcag cgccatctgc acgtcgttga acaggatgcg ccagcgcttg
     5341 ccggcatcgc ctttcggcaa atgcaggaac aggtcttcac cgagcgcctg ctcgggcgca
     5401 gccagctccg gcaaggccgc gccgggcgtc gcgcgcaact gccactgcgt gggcgtggcc
     5461 gccaaaagtt ccatgccgac ttcggcaaac agcggcgcca ccgtggcgac caatgccgcc
     5521 gcctcttccg cgctcaccgc gagcgagccg caagccatca ggcgcacgcc attgatgtcg
     5581 gcgaacgccc aggccggctc ggca
//
LOCUS       DASSVL010000317         3358 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_572819, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000317 DASSVL010000000
VERSION     DASSVL010000317.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3358)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3358)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3358
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_572819"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..380)
                     /locus_tag="VFM52_05535"
     CDS             complement(<1..380)
                     /locus_tag="VFM52_05535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019466741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HET8764662.1"
                     /translation="MAEPLLRGIHHVALICSDYPRSKAFYSETLGLRIVREVYREARD
                     SWKCDLEVSPGVQLELFSFPDAPPRPSWPEAQGLRHLAFVVADVDAAVATLAARGVAC
                     EPVRLDEHTGRRFVFLADPDGLPI"
     gene            complement(383..1390)
                     /gene="epmA"
                     /locus_tag="VFM52_05540"
     CDS             complement(383..1390)
                     /gene="epmA"
                     /locus_tag="VFM52_05540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007508179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004824 - lysine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006430 - lysyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EF-P lysine aminoacylase EpmA"
                     /protein_id="HET8764663.1"
                     /translation="MFGPPLPQRLPVGGEGWGEGGAFAALHLRAQLYALIRRFFAERR
                     VLEVETPILSAAGNTEPNIESFSTMFSGHVDAGARERWLRTSPEYPLKRLLAAGVGDC
                     YELGRVFRNGEAGGRHNPEFTMAEWYRVGWDHRQLIHETVALVTAALALVDKRAEVTI
                     TGYRQLFIDELGIDSVRASLDELQKPLAAFHIDPAGLTRDDWLDLLITHRLQPTWPAD
                     RITVIHDYPATQCALARIRPGDPPRAERFELYLGRYELANGYHELNRADEQRARFERD
                     NQRRRERGQRELPIDENLLAVLDHMPDCAGVALGVERLLMCLVGTDAIADVLAFPFAE
                     A"
     gene            1407..2723
                     /locus_tag="VFM52_05545"
     CDS             1407..2723
                     /locus_tag="VFM52_05545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015446967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HET8764664.1"
                     /translation="MFGYYLDLALRSLKRSPGLTALMVLAIGFGVAASMTSWSVFRAV
                     SGDPIPWKSAQLFVPQIDMWGPNGRGADGEPPNAMDYTDATALMRAHRAKRQSAIYQI
                     SPSIVPAEAGKHPINVSGHAVYGEFFPMLDTPFKYGTGWSASDDANRVQVVVISSKLN
                     QKLFGGANSVGRSISIEDRDYRVVGVLDDWNPQPRFYDVVNSGGFNSQSDDVFLPFQT
                     AIQAAIPNDGNTNCNAVPKESGFVGLQHSECVWIAYMAELDDAAAVTAYRDYLQGYAR
                     EQQQAGRFGWAPNNRLRDLRAWLDSQHVVPSDTKVSLLVALGLLLVCLVNTVGLLLAK
                     FLRRSGEIGVRRALGAPRKAIYLQFLTEAGMVGAAGGVLGLLLTAAGVASVGWVMPKD
                     IATLARLDVSLLLLTLLVAVLATMLAGLYPTWRASRVQPAWQLKSN"
     gene            2866..>3358
                     /locus_tag="VFM52_05550"
     CDS             2866..>3358
                     /locus_tag="VFM52_05550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007507123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide ABC transporter permease"
                     /protein_id="HET8764665.1"
                     /translation="MKLHPMIAALRKHKAGVVLIALQIALTLAIVCNAIFIIGQRVDR
                     VNRPTGLDEANLFLVSQQWVGAPSADTPDGVARLDAMQKEDLAALRGLPGVASVAPIN
                     SIPLLNSSWNGSVSTKPDRKFSDKGDNVRTTYYFSDDQVMATLGLKLVAGRAFNAGDV
                     QHQG"
BASE COUNT          554 a         1124 c         1151 g          529 t
ORIGIN      
        1 tcgatcggca ggccgtcggg atcggcaaga aagacgaagc ggcgaccggt gtgttcgtcc
       61 agccgcaccg gttcgcaggc gacgccgcgt gccgccagcg tcgccacagc ggcgtccacg
      121 tcggccacca cgaacgcgag atgacgcagc ccctgcgctt ccggccatga cggtcgcggc
      181 ggcgcgtcgg gaaaggagaa cagctccagc tgcacgccgg ggctgacttc caggtcgcat
      241 ttccaggaat cgcgcgcctc gcggtagacc tcgcgcacga tgcgcagccc cagcgtctcg
      301 ctgtagaacg ccttcgagcg cggatagtcc gagcagatca gggcgacgtg gtggatgccg
      361 cgcagcaggg gttcggccat cgtcacgcct cggcaaacgg aaacgccagc acgtcggcga
      421 tcgcgtcggt accgaccagg cacatcaaca ggcgctcgac gccgagcgcc acgccggcgc
      481 agtcgggcat gtggtcgagc accgccagca ggttctcgtc gatcggcagt tcgcgctggc
      541 cgcgttcgcg gcggcgctgg ttgtcgcgct cgaagcgtgc gcgctgctcg tcggcgcggt
      601 tcaactcgtg gtagccgttc gccagctcgt agcgccccag gtacagctcg aagcgctccg
      661 cgcgcggcgg gtcgccggga cggatgcgcg ccagcgcgca ctgcgtcgcc gggtaatcgt
      721 ggatcaccgt gatgcgatcg gccggccacg tcggctgcag gcgatgggtg atcagcaggt
      781 cgagccagtc gtcgcgcgtc agcccggcgg gatcgatgtg gaacgccgcc agcggcttct
      841 gcaactcatc gagcgaggcg cgcaccgaat cgatgcccag ctcgtcgatg aacagctgcc
      901 ggtagccggt gatggtcacc tccgcgcgct tgtccaccag cgccagcgca gcggtgacca
      961 gcgcgacggt ctcgtggatc aactggcgat gatcccagcc gacgcgatac cactccgcca
     1021 tggtgaactc ggggttgtgc cgcccgccgg cctcgccatt gcgaaacacg cgccccagct
     1081 cgtagcaatc tccgacgcct gccgcgagca ggcgcttgag cgggtattcc ggcgaagtgc
     1141 gcaaccaacg ctcgcgcgcg ccggcgtcga cgtggccact gaacatggtg ctgaaactct
     1201 cgatgttcgg ctcggtgtta ccggcagcgg agaggatcgg ggtttccact tccagcacac
     1261 ggcgctcggc gaagaaacga cgaatcaggg cgtagagctg cgcgcgcaga tgcagcgcgg
     1321 caaaagcccc cccctcgccc caaccctctc ccccaacggg aagccgttgg gggagagggg
     1381 gtccaaacat ggataaggag ttttgaatgt tcggttacta cctcgatctt gccctgcgca
     1441 gcctgaaacg cagtcccggc ctgaccgcct tgatggtgct ggcgattggc ttcggcgtgg
     1501 ccgcgtcgat gacctcgtgg tcggtgttcc gcgcggtgtc gggcgatccg atcccgtgga
     1561 agtcggcgca attgttcgtg ccgcagatcg acatgtgggg gccgaacggg cgcggcgcgg
     1621 atggcgagcc gccgaacgcg atggactaca ccgatgcgac ggcgctgatg cgcgcccacc
     1681 gcgcgaagcg gcagtcggcg atctaccaga tctcgccctc aatcgtgccg gcggaggccg
     1741 gcaagcaccc gatcaacgtc agcggccacg cggtgtatgg cgagttcttt ccgatgctgg
     1801 atacgccgtt caagtacggc acgggctgga gcgcgagcga cgacgccaac cgcgtgcagg
     1861 ttgtggtgat cagcagcaag ctcaaccaga agctgttcgg cggcgccaac agcgtggggc
     1921 ggagcatcag catcgaagac cgcgactacc gcgtggtcgg cgtgctggat gactggaacc
     1981 cgcagccacg cttctacgac gtggtcaatt cgggcggctt caacagccag tccgacgacg
     2041 tgttcctgcc gttccagacg gccatccagg cggccattcc caacgacggc aacaccaact
     2101 gcaacgcggt gcccaaggag tccggcttcg tcggcctgca gcattccgag tgcgtgtgga
     2161 tcgcctacat ggccgagctg gacgacgcgg cggcggtgac cgcctatcgc gactacctgc
     2221 agggctatgc gcgcgaacag cagcaggccg gccgcttcgg ctgggcgccg aacaaccgcc
     2281 tgcgcgacct gcgcgcgtgg ctggacagcc agcacgtggt gcccagcgac accaaggtct
     2341 cgctgctggt ggcgctgggc ctgctgctgg tgtgcctggt caataccgtg ggcctgctgc
     2401 tggcgaagtt cctgcgccgc agtggcgaga tcggcgtgcg gcgcgcgctg ggcgcgccgc
     2461 gcaaggcgat ctacctccag ttcctcaccg aggccggcat ggtcggcgcg gccggcggcg
     2521 tgctcggcct gctgcttacc gcggcgggcg tggccagcgt gggctgggtg atgccgaagg
     2581 acatcgccac tctggcacgg ctggacgtct cgttgctgct gctgaccctg ctggtggcgg
     2641 tgctcgccac catgctggcc ggcctgtacc ccacctggcg cgcctcacgc gtgcagccgg
     2701 cgtggcagtt gaagtcgaac tgatggccac gacgcggacc cgctccacgt tgtcgccccg
     2761 tagcaacccg cttgcgggcg cggcggtttt tcgcaaaggg cgtcattccc cgcaagcggg
     2821 cttttacctc ggtggcctga caaccccgtg caaggaatcc caaccatgaa actgcacccc
     2881 atgatcgcgg cgttgcgcaa gcacaaggca ggcgtggtgc tgatcgcgct gcagatcgcg
     2941 ctgaccctgg cgatcgtctg caacgcgatc ttcatcatcg gccagcgcgt cgaccgggtg
     3001 aaccgcccca ccgggctgga cgaggcgaac ctgttcctgg tcagccagca atgggtgggc
     3061 gcgcccagcg ccgatacgcc cgacggcgtg gccaggctcg atgccatgca gaaggaagac
     3121 ctggccgcgc tgcgcggcct gcccggcgtg gcttcggtgg cgccgatcaa ctcgatcccg
     3181 ttgctcaact cgtcctggaa cggttcggtc tcgaccaagc cggaccggaa gttcagcgac
     3241 aagggcgaca acgtacgcac cacgtattac ttcagcgacg accaggtgat ggccacgctg
     3301 ggcctgaagc tggtggctgg ccgtgcgttc aatgccggcg acgtgcagca ccagggtt
//
LOCUS       DASSVL010000318         3162 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_177286, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000318 DASSVL010000000
VERSION     DASSVL010000318.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3162)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3162)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3162
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_177286"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..279)
                     /locus_tag="VFM52_05555"
     CDS             complement(<1..279)
                     /locus_tag="VFM52_05555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="GGDEF domain-containing protein"
                     /protein_id="HET8764666.1"
                     /translation="MACLCGQVGHAHTADADPNAFIKETQALATTDHPRFLHRLAWLN
                     QDAAKLTPSQSWYLRYANAWEAAYEGDHARSEVMLQDIALHSSDPVLAD"
     gene            complement(352..561)
                     /locus_tag="VFM52_05560"
     CDS             complement(352..561)
                     /locus_tag="VFM52_05560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8764667.1"
                     /translation="MTDTIELPGTIGGDASLRRELKRQQAVPVQPTNAPGHDDGDRAV
                     DTPLPGRLQPKRKPHQLRVGRDSTG"
     gene            complement(608..1447)
                     /locus_tag="VFM52_05565"
     CDS             complement(608..1447)
                     /locus_tag="VFM52_05565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008212739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase"
                     /protein_id="HET8764668.1"
                     /translation="MADVIAIANADSGRRGRLACVGLGMTLGAHLTPLARSHIVQADV
                     VFAALSDAIVEEWLKRMHPDVRSLQPFYGEGKRRMQTYREWVALMLGELHAGKRVCGV
                     FYGHPGIFAWSPHAAIAQARAEGYEAYMEPGISAADCLYADLDIDPGRFGCQHFEASQ
                     LLYWERRIDTAGHLVLWQVGAVGNRSVGHLDNAMAYRALLVERLGQDYPQDHPVIVYR
                     GATLPIEHPRIRRITLRELAGVPLTAEETVVLPPAVTLQPNRAMLGRLQALDAAPRPD
                     TGS"
     gene            complement(1504..>3162)
                     /locus_tag="VFM52_05570"
     CDS             complement(1504..>3162)
                     /locus_tag="VFM52_05570"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GGDEF domain-containing protein"
                     /protein_id="HET8764669.1"
                     /translation="AQFEQAKGTDRARAAQLLRELHREASRLTPRQRWHLRYLDAWEA
                     SLVGNYAQADAQFREIIDHSGDAVMAARASAMLLSDLGFTRQYQAAYELAGQLVARLP
                     ALTDPAARYQVLENLSQAFDYAGQIDLAVTYADMMEEARPAGEAPCQPAYMRVAALYN
                     GKRLPPDSQPLEQATRECAAANKPLYVRALGLLRVAAYLDARQPAAASAVLARIGPEI
                     LQSGYSAQILSWRTKRAVVDLQLGRDEDARKAALAVLAMRRGNESNEWFRDAYHVLYQ
                     VEKRLGDAAAALAYHEQYVAQNQAFLDDVNARAVAYETVQQRVLAQELKAEQLDRQNI
                     VLRMRQALEAKRVETSRLAVALLVLVLVFGAMWMLRLKRSQLRFRQLSRLDGLTGILN
                     RQHFVAEAERALRELQRRRAVACMVFVDLDHFKRINDTYGHLAGDEVLRHVVASGCQQ
                     LRAGDLFGRLGGEEFGMLLIGCTHEQGFAIADRVRRAIEVAPVACDGVTMAVSASLGL
                     AFTDTCGHQLQQLFRAADLALYKAKRGGRNRTMVAMPGTGPVEA"
BASE COUNT          499 a         1122 c         1044 g          497 t
ORIGIN      
        1 atccgccagc accgggtcac tggagtgcag ggcgatatcc tggagcatga cctcggacct
       61 ggcgtgatcc ccctcgtacg cggcttccca tgcgttggcg taacgcaagt accacgactg
      121 gctcggcgtc agcttggccg cgtcctggtt gagccaagcc aggcggtgca ggaagcgcgg
      181 gtgatccgtg gtggccagcg cctgggtctc cttgatgaag gcattcgggt cggcgtccgc
      241 ggtgtgggca tggccaacct gcccacacag gcaggccacg aggctcgcgc ttgcgcccca
      301 tcgccactgc cccctcggct gtcgaaacac gtcgatccgc cttgcctgcc ctcaacccgt
      361 cgagtcacgc cccacgcgga gctggtgcgg cttgcgcttg ggttggagcc ggcccggaag
      421 cggagtgtcg accgcgcggt ccccgtcgtc atggcccggc gcattcgtcg gttgcaccgg
      481 cactgcctgc tggcgtttca gctccctgcg cagcgacgca tcgccaccga tggttcccgg
      541 caattcgatc gtatcggtca cggcatatcc cctggcactt gcatgacaca ctgatgggat
      601 cagtggttca ggacccggta tcgggccgtg gcgccgcatc cagcgcctgc agtcgaccca
      661 gcatggcacg gttcggctgc aaggtcaccg ctggcggcag caccacggtt tcctcggcgg
      721 tcaatggcac gccggccagt tcgcgcaggg tgatgcgccg aatgcgcggg tgctcgatag
      781 gcaacgtggc gccacggtag acgatcaccg gatgatcctg cgggtaatcc tgccccagcc
      841 gttccaccag cagcgcacgg taggccatgg cgttgtcgag atgccccacc gagcggttgc
      901 ccaccgcccc cacctgccac aacaccagat gacccgcggt gtcgatgcgc cgctcccagt
      961 acaggagctg gctggcctcg aaatgctggc agccgaagcg gccgggatcg atgtccaggt
     1021 cggcatacag gcaatccgca gcggaaatgc ccggctccat gtacgcctcg tagccttccg
     1081 cccgtgcctg agcgatcgcc gcgtgcggcg accacgcgaa gatgccggga tggccataga
     1141 acacgccgca cacgcgcttc ccggcatgca gctcgccgag catcagcgcc acccactcgc
     1201 gataggtctg catgcgccgc ttgccctcgc cgtaaaaggg ctgcaggctg cgtacgtccg
     1261 ggtgcatgcg tttgagccac tcctcgacga tggcatcgga gagcgcggca aacaccacgt
     1321 cggcctgcac gatgtggctg cgcgccagcg gcgtgaggtg cgcgccgagc gtcatgccca
     1381 gccccacgca ggccagccgt ccgcgccgtc cggagtcggc attggcgatg gcgatgacgt
     1441 cggccatcgg cagatcatgg cccgctggcc cgtgcgctcc gccagggcca accgtagcag
     1501 gcatcaagcc tccaccggcc cggtgccagg catcgccacc atcgtgcggt tgcggccgcc
     1561 gcgcttggcc ttgtacaacg ccaggtcggc cgcgcggaac aattgctgca gctggtggcc
     1621 gcaggtgtcg gtgaacgcca ggccaaggct ggccgaaacc gccatcgtca ctccgtcgca
     1681 agccaccggc gccacctcga tggcacggcg cacgcggtcg gcgatggcaa agccctgctc
     1741 gtgggtgcag ccgatcagca gcatgccgaa ttcctcgccg ccgagccggc cgaacaagtc
     1801 gcccgcgcgc aactgctggc agccgctcgc gaccacatgg cgcagcacct cgtcgccggc
     1861 cagatgccca taggtgtcgt tgatgcgctt gaagtggtcc aggtcgacga acaccatgca
     1921 ggcgacggca cgccgccgct gcagttcacg cagcgcacgc tcggcctcgg ccacgaaatg
     1981 ctggcgattg aggatgccgg tcaggccgtc cagccgtgac agctgccgga agcgcagctg
     2041 cgaacgtttc aggcgcagca tccacatggc gccgaacacg agcacgagca ccagcagggc
     2101 gaccgccagg cggctggttt ccacgcgctt ggcttccagc gcctgccgca tgcgcagcac
     2161 gatgttctgc cgatcgagtt gttcggcctt gagctcctgc gccagcaccc gctgctgcac
     2221 ggtttcgtag gccacggcgc gggcgttgac gtcgtcgagg aaggcctggt tctgcgccac
     2281 gtactgctcg tggtaagcca gcgcggccgc cgcgtcgccc aaccgcttct cgacctggta
     2341 gagcacgtga taggcgtcgc ggaaccactc gttcgactcg ttgccgcgcc gcatcgccag
     2401 cacggccagg gcggccttgc gcgcatcctc gtcgcgcccg agctgcaggt cgaccacggc
     2461 gcgcttcgtg cgccaggaaa ggatctgcgc gctgtagccg gattgcagga tctccgggcc
     2521 gatccgcgcc agcacggcag acgccgcagc cggctgccgc gcgtcgagat aggcggccac
     2581 ccgcagcagg cccagcgcac gcacgtacag gggcttgttc gccgcggcgc actcccgggt
     2641 ggcctgctcc aggggctggc tgtccggtgg cagccgcttg ccgttgtaca aggccgccac
     2701 gcgcatgtat gcgggctggc agggagcctc gcccgccggc cgtgcctctt ccatcatgtc
     2761 ggcgtaggtg acggcaaggt cgatctggcc ggcatagtcg aaagcctgcg acaggttttc
     2821 gagcacctgg tagcgcgccg ccggatccgt cagcgcgggc agccttgcaa ccagttggcc
     2881 ggcaagctcg taagccgcct ggtactggcg ggtgaaaccc aggtcgctga gcagcatggc
     2941 cgacgccctg gcggccatca ccgcgtcgcc cgaatggtcg atgatctcgc ggaactgcgc
     3001 atcggcctgc gcgtaattcc ccaccagcga cgcctcccat gcatcgaggt agcgcaggtg
     3061 ccagcgctgg cgcggcgtca atcgcgacgc ctcgcgatgg agctcgcgca gcaactgcgc
     3121 cgcccgggcg cgatccgtcc cctttgcctg ttcaaactgg gc
//
LOCUS       DASSVL010000319         3905 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_614987, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000319 DASSVL010000000
VERSION     DASSVL010000319.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3905)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3905)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3905
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_614987"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            30..1238
                     /locus_tag="VFM52_05575"
     CDS             30..1238
                     /locus_tag="VFM52_05575"
                     /EC_number="1.14.11.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019464725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0043687 - post-translational protein
                     modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HET8764670.1"
                     /translation="MKTARARRTVTPPIEVRGSAHLPLGMPPARFLRDYWQKHPLLIR
                     NAFPGFVPPIAPEDLAGLACEEGVLARLVRHDEARERWQLKTGPLSEADFAKTGDHNW
                     TLLVQDVDKWDADVARLLEPFAFLPSWRLDDIMISYAEPGGGVGAHVDQYDVFLIQGL
                     GQRHWAISTDPAAPKDFRPDIELKQLVSFDPTHEWLLAPGDILYLPPDVPHDGIAFGG
                     PCMTISVGMRAPSQAELTGDLADYLAERMPDELRYADPDLAPVKAVGEIDAAALARLR
                     RALPFAAALDDDALRDWFGRFVTRYRNAQTPAPPARMVTAAALHKQLAAGARLLRHPW
                     SRLAWARGKAGTTLFANGDAWPAPPALAKALCAQRKLVLPGAPAAVDEALLLALVNAG
                     HLAVRRARRQ"
     gene            1235..1741
                     /locus_tag="VFM52_05580"
     CDS             1235..1741
                     /locus_tag="VFM52_05580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008210225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8764671.1"
                     /translation="MSVPAADDEYRSRAIKGAAEIAAARLQLLAAAQHCLALHLPRLT
                     PQDYASEAELAEIRRIATSGRRADIRILLHDPAAAMRDDHRLIALFQRLSSSIHIRTP
                     VEDVDRQRTSAWLTTDTGGYLLLPDAGKPAGRTALRDRPAQAPLIRLFDEIWERSSRA
                     SELESLNL"
     gene            1981..>3905
                     /locus_tag="VFM52_05585"
     CDS             1981..>3905
                     /locus_tag="VFM52_05585"
                     /EC_number="1.2.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008435566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004591 - oxoglutarate dehydrogenase
                     (succinyl-transferring) activity [Evidence IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate dehydrogenase E1 component"
                     /protein_id="HET8764672.1"
                     /translation="MTTNLIREFSSSSQLAGGNADYVEALYDTWLTDPAAVPAEWSTY
                     FETFKGREAGDVSHSGAIARIEAAQKRHFAAAAPVDDAHARKQAGVLRLLTAYRSRGH
                     LGADLDPLGLARKMEAPDLGLAFHGLSEADLDTEFDCGTYAGGGQRMKLRELWARLKK
                     VYTGPIGAEFMHISDHVQRNWIYTRLEKANGSAGLDKAGKLHILDELTAADGLERYLH
                     TKYVGQKRFSLEGGDSLIPLLDDVVRTAGDSGVKEVVIGMAHRGRLNVLVNILGKSPR
                     SLFDEFEGHFDNPDDPAHSGDVKYHMGFSADVRTPKGGTHVALAFNPSHLEIVNPVVS
                     GSVRARQVRRGDADRTRSMAVLVHGDSALAGQGVNMELFNMSQLRGFKIGGSLHVVVN
                     NQVGFTTSSTQDTRSTLYCTDLAKMVNAPVLHVNGDDPEAGIEAVRLAYDFRVQFRKD
                     VVIELVCFRRHGHNEADEPMATQPVMYTIIKKRPPTREIYGQQLLAEGVIAAGYVQQR
                     FDAYRGELEAGNPVTDLDPNPQRDIQIDWTSHLDAKLSEPVDTTVPKAELLDLANQLL
                     VIPKDITLQSRVANIYDDRRKMASGEHPADWGFAENLAYATIIHDGHDLRLVGQDTSR
                     GTFFHRHAVLHDQKDGHT"
BASE COUNT          639 a         1458 c         1251 g          557 t
ORIGIN      
        1 acgcccgggg gcaccggtac aatgcgccga tgaagaccgc ccgcgcccgc cgcaccgtca
       61 cgccaccgat cgaggtgcgt ggttccgccc acctgccgct cggcatgcca cccgcgcggt
      121 tcctgcgcga ctactggcag aagcatccac tgctgatccg caacgcgttc cccggcttcg
      181 tcccgccgat cgcgccggaa gacctcgccg ggctggcctg cgaggaaggc gtactggcgc
      241 ggctggtccg ccacgacgag gcccgcgaac gctggcagct gaagactggc ccgctcagcg
      301 aggcggactt cgcgaagacc ggcgaccaca actggacgct gctggtgcag gacgtcgaca
      361 agtgggacgc cgacgtggcg cggctgctcg agccgttcgc gttcctgccg agctggcggc
      421 tcgacgacat catgatctcg tatgccgagc cgggcggcgg cgtcggcgcg cacgtcgacc
      481 agtacgacgt gttcctgatc caggggctgg gccagcggca ctgggcaatc agcaccgatc
      541 ccgcggcgcc gaaggatttc cggcctgaca tcgagctgaa gcagctggtc agcttcgacc
      601 ccacccacga gtggctgctc gcacccggcg acatcctgta tctgccgccc gacgtgccgc
      661 acgacggcat cgccttcggt ggcccctgca tgacgatctc ggtcggcatg cgcgcgccct
      721 cgcaggctga gctcactggc gatctcgccg actatctcgc cgaacgcatg cccgatgagc
      781 tgcgctacgc cgaccccgat ctcgcgccgg tcaaagccgt cggcgagatc gacgcggcgg
      841 cgctcgcccg cctgcgccgg gcgctgccgt tcgcggcggc gctggacgac gacgcgctgc
      901 gcgactggtt cggccgcttc gtcacccgct accgcaacgc gcagacgccg gcgccgccgg
      961 cccgcatggt gaccgcggct gcgctgcaca agcagttggc ggccggcgca cgcctactgc
     1021 gccatccgtg gtcgcgcctg gcctgggcgc gcggcaaggc cgggaccacc ttgttcgcca
     1081 acggcgacgc ctggccggcg ccacccgcgc tagccaaagc gctgtgcgcg caacgcaagc
     1141 tggtcctgcc cggtgctccc gccgcggtcg acgaggcctt gctgctcgcg ctggtcaacg
     1201 ccggccatct cgccgtgcgt cgggcacgcc gtcaatgagc gtgccggccg ccgacgacga
     1261 gtaccggtca cgcgccatca agggcgccgc cgagatcgcc gccgcacgcc tgcaactgct
     1321 ggcggccgcg caacactgcc ttgcgctgca cctgccgcgg ctgacgccgc aggactacgc
     1381 cagcgaggcc gaattggccg agatccgccg catcgccacc tccggccgcc gcgccgacat
     1441 ccgcatcctg ctgcacgacc ccgcggccgc catgcgcgac gaccatcggc tgattgcgct
     1501 gttccagcgc ctgtccagct cgatccacat ccgcacgccg gtcgaggacg tcgaccgcca
     1561 gcgcaccagt gcctggctca ccaccgacac cggcggctac ctgctgctgc ccgacgccgg
     1621 caagcctgcc gggcgcaccg cgctgcgcga ccgccccgca caggcaccgc tgatccggct
     1681 gttcgacgaa atctgggaac gctcgtcacg tgccagtgaa ctcgaatcgc tcaacctgtg
     1741 acgcccctgg atgccgactt gcccggtccc gaagccgccg ccccgcaaca aactgcggcc
     1801 gcacgcggcc tgcgaccaag gtcgcgggcg aaatggccgg ggacgccttg ctgcaggccg
     1861 gttccgggcc tttcgcggct tcctccatct gccggcgcaa ggctataatt cacaggattt
     1921 atcgacggcg aatgccgttg ccgacgaatc aacgcaaccc cttccccttt cggtggtgac
     1981 gtgactacga atctgatccg cgagttctcc tcttcctccc aactcgctgg cggcaatgcc
     2041 gattacgtcg aagccctcta cgacacctgg ctgaccgacc ccgcagcggt gccggcggag
     2101 tggagcacgt atttcgagac gttcaagggc cgcgaggctg gcgatgtgtc gcactccggc
     2161 gcgatcgccc gcatcgaggc cgcgcagaag cgccacttcg cggcggcggc cccggtcgac
     2221 gacgcgcacg cgcgcaagca ggccggcgtg ctgcgcctgc tcaccgccta ccgttcgcgc
     2281 ggccacctcg gcgccgacct cgatccgctc ggccttgcgc gcaagatgga ggccccggat
     2341 ctcggcctcg ccttccacgg cttgtccgag gccgacctcg acaccgaatt cgattgcggc
     2401 acctacgccg gcggcggcca gcggatgaag ctgcgcgagt tgtgggcgcg gctgaagaag
     2461 gtctacaccg gaccgatcgg tgccgagttc atgcacatct ccgaccatgt gcagcgcaac
     2521 tggatctaca cccggctgga aaaggccaac ggcagcgccg ggctggacaa ggccggcaag
     2581 ctgcacatcc tggacgagct caccgcggcc gacggcctcg aacgctatct gcataccaaa
     2641 tacgttggcc agaagcgctt ctcgctcgag ggcggcgaca gcctgatccc gttgctggac
     2701 gatgtggtgc gcacggccgg cgacagcggc gtcaaggaag tcgtgatcgg catggcccac
     2761 cgcggccgtc tgaacgtgct ggtcaacatc ctcggcaagt cgccgcgctc gctgttcgac
     2821 gagttcgaag gccacttcga caacccggac gacccggccc actccggcga cgtgaagtac
     2881 cacatgggct tctccgccga cgtcaggacg ccgaagggcg gcacccacgt ggcgctggcg
     2941 ttcaatccct cgcacctgga aatcgtcaac ccggtggtgt ccggctcggt gcgcgcgcgc
     3001 caggtgcgcc gcggcgacgc cgaccgcacc cgctcgatgg cggtgctggt gcatggcgac
     3061 tccgcgctgg ccggccaggg cgtgaacatg gagttgttca acatgtcgca gctgcgcggc
     3121 ttcaagatcg gcggcagcct gcacgtggtg gtgaacaacc aggtcggctt caccacttcc
     3181 agcacccagg acacgcgctc cacgctgtac tgcaccgacc tcgcgaagat ggtcaacgcg
     3241 ccggtgctgc acgtgaacgg cgacgatccc gaggcgggga tcgaggccgt gcgcctggcc
     3301 tacgacttcc gcgtccagtt ccgcaaggac gtcgtgatcg agctggtgtg cttccgccgc
     3361 cacggccaca acgaggccga cgagccgatg gcgacccagc ccgtgatgta cacgatcatc
     3421 aagaagcggc cgccgacgcg cgagatctac ggccagcagc tgctcgccga aggcgtgatc
     3481 gccgccggct acgtgcagca acgcttcgac gcctaccgcg gcgaactcga ggccggcaac
     3541 ccggtgaccg acctcgaccc gaacccgcag cgtgacatcc agatcgactg gacgtcgcac
     3601 ctggatgcca agctctccga gccggtcgac accacggtgc cgaaggccga gctgctcgac
     3661 ctcgcgaacc aactgctggt catccccaag gacatcacgc tgcagtcgcg cgtggcgaat
     3721 atctacgacg accgccgcaa gatggcgagc ggcgagcacc cggccgactg ggggttcgcc
     3781 gagaacctcg cctacgccac gatcatccac gacggccacg acctgcgcct cgtcggccag
     3841 gacaccagcc gcggcacctt cttccaccgc catgcggtgc tgcacgacca gaaggacggc
     3901 cacac
//
LOCUS       DASSVL010000320         3355 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_191126, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000320 DASSVL010000000
VERSION     DASSVL010000320.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3355)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3355)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3355
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_191126"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            129..497
                     /gene="gspG"
                     /locus_tag="VFM52_05590"
     CDS             129..497
                     /gene="gspG"
                     /locus_tag="VFM52_05590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007806842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015627 - type II protein secretion
                     system complex [Evidence IEA];
                     GO_process: GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system major pseudopilin GspG"
                     /protein_id="HET8764673.1"
                     /translation="MLAVIVLIGVIGAVVVTQVGKNVDKGKYGAGKAQLVTLSQKIDN
                     YALDNGTPPQQLQDLVTRPPNASNWQGPYAKESELKDPWGHAFGYKYPGDHGNYDLIF
                     YGQDGKPGGEGYSKDVGNWQ"
     gene            614..1051
                     /locus_tag="VFM52_05595"
                     /pseudo
     CDS             614..1051
                     /locus_tag="VFM52_05595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007806841.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0015627 - type II protein secretion
                     system complex [Evidence IEA];
                     GO_process: GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="GspH/FimT family pseudopilin"
     gene            1048..1533
                     /locus_tag="VFM52_05600"
     CDS             1048..1533
                     /locus_tag="VFM52_05600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019463879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HET8764674.1"
                     /translation="MKAGVREPRCGIRQGAPAGRCGSGVPATRSRQRGFTLLEVIAAI
                     LLLGIAFAALLKVAGGAMALSRNAADRDEAALWARSLLDSAFVTTPVAPGRRSGRFDA
                     RYQWTLTTTPWQAPGSPPGSDPLALYRLDLAVRWGNGARPQVAHFETLRLGAAPAAAP
                     P"
     gene            1530..2183
                     /locus_tag="VFM52_05605"
     CDS             1530..2183
                     /locus_tag="VFM52_05605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007806837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HET8764675.1"
                     /translation="MNRARGFTLLEVLGALALLALLLVGVYGGIRGALHGVRSGSASI
                     ERMDAIDATQGFLRRELAQALAQPIGRDDHGQPLFFAGGADELKFVAPLPGYLGALGP
                     QLQVLRLVDDGTRGKRLEYQLALLPPDGSAPAALGTPQVLLDRIQRGGFAYRGRDATG
                     AEVAWTDTWPDGRRLPQLVRIRLTLAGQHAWPDLEVPLRVDAGAVVGRVGLLRGAAR"
     gene            2207..3040
                     /locus_tag="VFM52_05610"
     CDS             2207..3040
                     /locus_tag="VFM52_05610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007081672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein GspK"
                     /protein_id="HET8764676.1"
                     /translation="MALLLVLWACTLLAVVLGGYAALARTQALQTRYQFAQTQAHYAA
                     EAGLMRAIQALQAGDPKQRWIGDGRAYPFAFAGAQVTVRIVDEDGKVDLNAATPAVLQ
                     GLFRAAGMDAAAAGALAANVVTWRTFLVQPGQASRDRAAYAAAGRSYGPRHGPFATVQ
                     EFQQVLGVTPQRYAALAPVLTIWSGRAVPDPNTAPPLALAAIPGLDPAQRAAVLATRR
                     HNAQAGVLLTAGGITHSIRSQAELADGVRATVLATIRLRPGATGAQPYTVLRWQEGDR
                     E"
     gene            3037..>3355
                     /locus_tag="VFM52_05615"
     CDS             3037..>3355
                     /locus_tag="VFM52_05615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial assembly protein"
                     /protein_id="HET8764677.1"
                     /translation="MSAATTLLRQGMDRALAAWRMSPAPAFFAWWGGELAACLPPRWR
                     AVFGAGATWYLLRVAGAEWRVNRAGDAQGLATGRDDQPAAAPQAALAGAWRGVETVDR
                     RRAV"
BASE COUNT          423 a         1150 c         1316 g          466 t
ORIGIN      
        1 gaatcgggaa gcgggatggc ggagatggca aggcgtgtcg gcgcacggtg ccggcgtctt
       61 cggaccgcgt gccagttccg catcccgtac gcatcgcgcg ccgcgccgcc ggtttcacgc
      121 tgctcgaaat gctcgcggtg atcgtgctga tcggcgtgat cggcgcggtg gtggtgaccc
      181 aggtcggcaa gaacgtggac aagggcaagt acggcgcggg caaggcgcag ctcgtcacgc
      241 tcagccagaa gatcgacaac tacgcgctgg acaacggcac gccgccgcag caactgcagg
      301 atctggtgac gcgcccgccg aatgcgtcca actggcaggg gccgtatgcg aaggagtccg
      361 aactgaagga cccgtggggc cacgcgttcg gctacaagta ccccggcgac cacggcaatt
      421 acgacctgat cttctacggc caggacggca agccgggcgg cgagggctac agcaaggatg
      481 tggggaactg gcaatgaagc cgggatgggg gagccgggag tcggcatcca ggagcaccgg
      541 cgcctggcgc gccgcggcgc cggatgccga ctcccggccg ccccatcccg gccggcagcg
      601 cgcgggcgcc gttggtttca ccttgttcga gatgctcgcc gtgatcctcc tgatcggcat
      661 cgccgccgcg gcggtgtcgg tatcggtgac gcaggggctg gccagtgcgc ggatcaacgc
      721 cgccagcggc gagatcgcgg cggggctgcg ggcgacgcgc gcgcaggcga tcgtccgggg
      781 cagcgagcag acgttcgacg tggacgtgga tgccggcacg tggagtggcg ccaagcggcg
      841 caacgtgcgc ttgccgccgg gcctcaggct ggccgtcacc agcgcgttgg aggaccgcgc
      901 cgatgcgcac accgggcgca tccgcttctt ccccgacggc agctcgaccg gcggccacat
      961 cgtgctgacc agcggccggc ggcagtggcg cgtcaacgtg gcgtggctga ccgggcaggt
     1021 ggccgtcgtc gccgaggtcg cgcggccatg aaggccgggg tgcgggagcc gcgttgcggg
     1081 atacggcagg gcgcacctgc cggccgttgc ggatccggcg ttccggctac ccgatcccgg
     1141 caacggggtt tcaccctgct ggaagtcatc gcggcgatcc tgctgctcgg catcgcgttc
     1201 gccgcgttgc tcaaggtcgc cggcggcgcg atggcgctgt cgcgcaacgc ggccgaccgt
     1261 gacgaggccg cgctgtgggc gcgcagcctg ctggattcgg cgttcgtgac gacgccggtc
     1321 gcgccgggcc gccgcagcgg ccggttcgat gcgcgctatc aatggacgtt gacgacgacg
     1381 ccgtggcagg cgccgggcag cccgcccggc agcgatccgc tcgcgctgta ccggctcgat
     1441 ctggcggtgc gctggggcaa cggcgcgcgg ccgcaggtcg cgcatttcga gaccctgcgc
     1501 ctgggcgcgg cgccggctgc cgccccgcca tgaaccgcgc gcgcggcttc accctgctcg
     1561 aagtgctggg cgcgctcgcg ctgctcgcgt tgctgctggt cggcgtgtac ggcggcatcc
     1621 gcggcgcgct gcatggcgtg cggtccggca gcgcgtccat cgagcgcatg gatgcgatcg
     1681 acgccacgca gggattcctg cgccgcgagc tggcccaggc gctggcgcag ccgatcgggc
     1741 gggatgatca cggccagccg ctgttcttcg ccggcggcgc ggacgaattg aaattcgtcg
     1801 cgccgctgcc gggttatctg ggtgcgctcg ggccgcagct gcaggtgctg cggctggtcg
     1861 atgacggcac gcgcggcaag cggctcgaat accagctggc gctgctgccg ccggacggca
     1921 gcgccccggc ggcactcggc acgccgcagg tgctgctcga ccgcatccag cggggcggct
     1981 tcgcctatcg cggccgcgac gccaccggcg ccgaggtggc gtggacggac acctggcccg
     2041 atggccgccg cctgccgcag ctggtgcgca tccgcctgac gctggccggg cagcatgcct
     2101 ggcccgatct cgaggtaccg ctgcgggtgg atgccggcgc ggtggtcggg cgcgtcggcc
     2161 tgctgcgggg ggcggcgcga tgatccccgc gcgccgccag cgtggcgtgg ccctactcct
     2221 cgtgctgtgg gcatgcacgc tgctcgccgt cgtgctcggc ggctacgcgg cgctggcgcg
     2281 cacgcaggcg ctgcagaccc gctaccagtt cgcgcagacg caggcgcatt acgcggccga
     2341 agccggcctc atgcgcgcga tccaggccct gcaggcgggc gacccgaaac agcgctggat
     2401 cggtgacggc cgcgcgtatc cgttcgcgtt cgccggcgcg caggtgaccg tgcgcatcgt
     2461 cgacgaggac ggcaaggtgg atctgaacgc cgcgacgccg gccgtgctgc aaggcctgtt
     2521 ccgcgcggcc ggcatggacg cggcggcggc cggcgcgctg gccgcgaacg tggtcacctg
     2581 gcgcaccttc ctcgtgcagc ccggccaggc gtcacgcgac cgcgcggcgt atgcggcggc
     2641 cgggcgcagc tacgggccgc ggcacggccc gtttgcgacg gtgcaggagt tccagcaggt
     2701 gctgggggtg acgccgcagc ggtacgcggc gctggcgccg gtgctgacga tctggtccgg
     2761 gcgtgccgtt cccgacccaa acaccgcgcc gccgctggcg ctggcggcga ttccggggct
     2821 cgatccggcc cagcgtgcgg cggtgctcgc cacccgccgg cacaacgcgc aggcgggtgt
     2881 gctgctcact gccggtggaa tcacgcatag tattcgttca caggccgaac tggccgatgg
     2941 ggtgcgtgcc acggtgctgg ccacgatccg cctgcggcct ggtgccacgg gcgcgcaacc
     3001 gtataccgtg ctgcgctggc aggagggtga tcgcgaatga gcgcggcaac gacgctgctg
     3061 cgacagggga tggaccgcgc gctggccgct tggcggatgt cgccggcgcc ggcgtttttc
     3121 gcgtggtggg gcggcgagct ggcagcgtgc ctgccgccgc gctggcgcgc ggttttcggc
     3181 gcgggtgcga cgtggtacct gttgcgcgtg gccggtgccg agtggcgcgt gaaccgcgcc
     3241 ggtgacgcgc aggggctggc caccgggcgc gacgaccagc ccgccgccgc gccgcaggcg
     3301 gcgctggcgg gagcctggcg aggcgtggag acggtcgatc gccggcgggc cgtgg
//
LOCUS       DASSVL010000321         3157 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_276022, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000321 DASSVL010000000
VERSION     DASSVL010000321.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3157)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3157)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3157
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_276022"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1929)
                     /locus_tag="VFM52_05620"
     CDS             complement(<1..1929)
                     /locus_tag="VFM52_05620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007808899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006302 - double-strand break repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HET8764678.1"
                     /translation="MRLTTIKLAGFKSFVDPTTLNLPANMTGVVGPNGCGKSNIIDAI
                     RWVMGESAASRLRGDSLTDVIFSGSTSRKPVGQATVELIFDNGDGTVQGEYGQYAEIS
                     VKRQVTRDGQSAYFLNGARCRRRDITDLFLGTGLGPRSYSIIEQGMITQIIEAHPEEL
                     RTHLEEAAGISKYKERRKETESRIKATRENLDRVRDVRDEVDKQLEHLNRQARAAERW
                     KAYKEEETRKQAELRALEYRGLKRQHDGEGEGLTAAETEIEKQLAGQREIEAQLESMR
                     ERHVEASEHLNAVQADVYKVGAEIARVEQQVRFNRDTAERLQRAQGEAEREFTELSAQ
                     IGGDREQAENLRAALAEGEPRLETLQQLQDDTAEAQRSADAKLADWQQRWDVHTRTAG
                     ESSRAAEVERTKLNYLDRQSIDLAKRRETLEAEQRATDFAALEAESERIAIEHDTQRE
                     KLETLGATLDQYKTGYEQVVDQERQLQATLNDARSQLQTSRGRLSSLEALQHAALGQE
                     ESPANQWLAKLGLGTPQRLGEVLQVEAGWETAVETVLAALIDGVLVDDFGAIAGELAG
                     LSDADIAVFDAARGDAGAAGTLAAQVRGPAAALRLLGQVRTAATPDEARQRGGTLAAG
                     ESVITQGGEWFGPGWARVR"
     gene            complement(1964..2221)
                     /locus_tag="VFM52_05625"
     CDS             complement(1964..2221)
                     /locus_tag="VFM52_05625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007808901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BolA family protein"
                     /protein_id="HET8764679.1"
                     /translation="MTDHGAVMAEIRQRLTAAFAPTELEVIDDGHLHIGHAAEGKGHF
                     RVHIVSPAFAGVLPVKRHRMVYAALDDLMDHGIHALSIDAK"
     gene            complement(2218..2517)
                     /locus_tag="VFM52_05630"
     CDS             complement(2218..2517)
                     /locus_tag="VFM52_05630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014037825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciI family protein"
                     /protein_id="HET8764680.1"
                     /translation="MWYVVIGTDNPDSLAGRKAARPAHLARLKALLDEGRLMLAGPFP
                     AMDSSEPGPAGFTGSLIVAEFPSLADAETWAKADPYLATGVYRETTVKPFVKALP"
     gene            complement(2636..>3157)
                     /locus_tag="VFM52_05635"
     CDS             complement(2636..>3157)
                     /locus_tag="VFM52_05635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007508449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043039 - tRNA aminoacylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid--tRNA ligase-related protein"
                     /protein_id="HET8764681.1"
                     /translation="VIEHNPQIGREELRDREAMAAHARRLGVQVKPGYGWGKLLQEIF
                     EATVEETLIQPTFITQHPKEVSPLARENDTDKGITDRFELFVSGKEIANGFSELNDPE
                     DQAARFKAQVAALDAGDDEAMHYDADYIRALEVGLPPTGGLGIGIDRLVMLLTGSASI
                     RDVLLFPYMRPEA"
BASE COUNT          404 a         1097 c         1085 g          571 t
ORIGIN      
        1 acgcacgcgc gcccagccgg ggccgaacca ttcgccgccc tgggtgatga cggattcgcc
       61 ggcagccagc gtaccgccgc gctggcgggc ttcgtccggc gtggccgccg tccgtacctg
      121 gccgagcaga cgcagcgctg cggccgggcc gcgcacctgc gccgcgagcg tgccggcggc
      181 accggcgtcg ccgcgagccg cgtcgaacac ggcgatgtcg gcgtcgctga ggccggcaag
      241 ctcgccggca atggcgccga aatcatcgac cagcacgccg tcgatcagcg cggccagcac
      301 ggtctccacc gcggtttccc agccggcctc gacctgcagc acctcgccca gccgctgcgg
      361 ggtacccagg ccgagcttgg ccagccactg gttcgcgggg ctctcctcct gcccgagcgc
      421 cgcgtgctgc agcgcttcga gagaggataa acgaccgcgc gaggtttgca actgcgagcg
      481 cgcgtcgttg agcgtggcct gcagctggcg ttcctggtcg acgacctgct cgtagccggt
      541 cttgtactgg tcgagcgtgg cgcccagtgt ctcgagtttt tcacgctggg tgtcgtgctc
      601 gatcgcaatg cgttccgact cggcttcgag cgcggcgaaa tcggtcgcac gctgctcggc
      661 ctcgagcgtt tcgcgccgct tcgcgaggtc gatcgactgg cgatccagat agttgagctt
      721 ggtgcgctcc acctcggcgg cgcgactcga ctcgccggcg gtgcgcgtgt gcacgtccca
      781 gcgctgctgc cagtcggcga gcttggcgtc ggcgctgcgc tgtgcctcgg cggtgtcgtc
      841 ctgcagctgc tgcagggttt ccagccgcgg ctcgccctcg gccagggcag cgcgcaggtt
      901 ttccgcctgc tcacggtcgc cgccgatctg cgcggacagc tcggtgaatt cgcgctcggc
      961 ctcgccctgg gcgcgctgca ggcgctcggc ggtatcccgg ttgaagcgca cctgctgctc
     1021 gacgcgcgca atctcggcgc cgaccttgta cacgtcggcc tgcaccgcgt tcaaatgctc
     1081 gctggcctcg acgtggcgct cgcgcatgct ttccagctgc gcctcgatct cgcgctggcc
     1141 ggcgagctgc ttctcgatct cggtttccgc cgccgtgagg ccttcgccct cgccatcgtg
     1201 ctggcgcttc aaaccgcggt attcgagcgc gcgcagttcg gcctgcttgc gggtttcctc
     1261 ttccttgtag gccttccagc gctcggcggc acgcgcctgg cggttcaggt gttccagttg
     1321 cttatccacc tcgtcgcgca cgtcgcgcac gcggtcgagg ttctcgcggg tggccttgat
     1381 gcggctctcg gtttccttgc gacgctcctt gtacttggag atgccggcag cctcttccag
     1441 gtgcgtgcgc aactcttccg ggtgcgcctc gatgatctgg gtgatcatgc cctgctcgat
     1501 gatcgagtag ctgcgcggcc ccagcccggt gccgaggaac aggtcggtga tgtcgcgccg
     1561 gcgacagcgc gcgccattga ggaaatacgc ggactgcccg tcgcgcgtca cctggcgctt
     1621 caccgagatc tcggcgtact ggccgtactc gccctgcacc gtgccgtcgc cgttgtcgaa
     1681 gatcagctcg accgtggcct gccccaccgg cttgcgcgag gtggaaccgg agaagatcac
     1741 gtcggtcagc gaatcgccgc gcaggcggct ggccgcgctc tcgcccatca cccagcggat
     1801 cgcgtcgatg atgttggact tgccgcagcc gttcgggccg accacgccgg tcatgttcgc
     1861 cggcaggttc agcgtggtgg gatcgacgaa ggacttgaaa cccgcgagtt tgatggtggt
     1921 caggcgcatg cgctggtcgt ggctggaggg aggcggggac gcgtcacttc gcgtcgatgg
     1981 acagcgcgtg gatgccgtga tccatcaggt cgtcaagtgc cgcgtacacc atccggtgcc
     2041 gcttgaccgg cagcacgccg gcaaacgccg ggctgacgat gtgcacgcgg aaatgcccct
     2101 tgccttccgc cgcatggcca atgtgcaggt ggccatcgtc gatcacttcc agctcggtcg
     2161 gcgcaaacgc cgccgtgagc cgctggcgga tttccgccat caccgcgcca tggtcggtca
     2221 tggcagcgcc ttcacgaacg gcttgaccgt ggtttcgcga tagaccccgg tggccaggta
     2281 cgggtcggct ttcgcccacg tctcggcatc cgccagcgag ggaaattccg ccacgatcag
     2341 gctgccggtg aagccggccg gaccgggctc gctggaatcc atggccggga acggcccggc
     2401 cagcatgagc cggccttcgt ccagcagggc cttgagccgc gcgaggtgcg ccgggcgcgc
     2461 cgccttgcgg ccagccaggg aatccgggtt gtcggtgccg atcacgacgt accacatggg
     2521 caaggctccg ttgctgggca aagccggcat tttacccgac tgcacgcgcc acccgcgggg
     2581 cccgctgcag gcccgtcgcc gcttcgccgc agcgcgcctg tacccggggt ccgcctcagg
     2641 cctcgggccg catgtacggg aacagcagca cgtcgcggat cgacgccgag ccggtgagca
     2701 gcatgacgag gcggtcgatg ccgatgccga ggccgccggt gggcggcagg ccgacttcga
     2761 gcgcgcggat gtagtcggcg tcgtagtgca tggcctcgtc gtcgccggcg tcgagcgcgg
     2821 ccacctgggc cttgaagcgc gcggcctggt cttccgggtc gttgagctcg gagaagccgt
     2881 tggcgatttc cttgccgctg acgaacagct cgaagcggtc ggtgatgccc ttgtccgtat
     2941 cgttctcgcg cgccagcggc gagacttcct tcgggtgctg ggtgatgaag gtcggctgga
     3001 tcagcgtctc ctccaccgtg gcctcgaaga tttcctgcag cagcttgccc cagccgtagc
     3061 cgggcttgac ctgcacgccc aggcgcctgg cgtgcgcggc catcgcttcg cggtcgcgca
     3121 gctcctcgcg cccgatctgc gggttgtgtt cgatcac
//
LOCUS       DASSVL010000322         4090 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1405528,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000322 DASSVL010000000
VERSION     DASSVL010000322.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 4090)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4090)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4090
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1405528"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(83..820)
                     /locus_tag="VFM52_05640"
     CDS             complement(83..820)
                     /locus_tag="VFM52_05640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019465947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_process: GO:0055070 - copper ion homeostasis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="copper homeostasis protein CutC"
                     /protein_id="HET8764682.1"
                     /translation="MSGCVLEVAANSVASALAAQAGGAGRVELCTALELGGLTPAHAT
                     IAMARERLRIPLYVLIRPRAGDFLYDDLECEAMQRDIETCVALGCDGVVLGVLDAEGQ
                     VDVERCRSLIAAAGRLGVTFHRAFDLVRDPRRALADVIALGCERVLTSGGQASAMEGI
                     TLIRSLVAQAAGRLVVMPGAGVTASNLFALAATGAREFHASAKLQLASRMRHRPERLA
                     DMQVGELRSDVQQVRALVQALQAIDQA"
     gene            complement(817..1797)
                     /locus_tag="VFM52_05645"
     CDS             complement(817..1797)
                     /locus_tag="VFM52_05645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007511308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase"
                     /protein_id="HET8764683.1"
                     /translation="MGRRLDAAESIPTALRGATVRVASTWDFGVAANQAAWAILGKQG
                     HALDAVEAGARVPEADLRNHSVGKGGYPDRDGKVTLDASIMDAEGNCGGVAAMEHITH
                     AISVARRVMERTPHVLLAGDGALQFALEQSFKKENLLTPEADAAWHAWLKTAHYQPVI
                     NSEVRDYGAGVPAGLPGGKDNHDTIGMLALDAHGKLAGACTTSGMAWKLHGRVGDSPI
                     IGAGLYVDGEVGGATSTGVGEEVIRNAGSFLVVELMRQGRTPAEACHEAVMRIVRKKP
                     KTAKDIQVGFLAMNKDGEVGAWAIQPGFSYAVCDARDQRALIPAKSVFPA"
     gene            2108..3166
                     /locus_tag="VFM52_05650"
     CDS             2108..3166
                     /locus_tag="VFM52_05650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008212997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HET8764684.1"
                     /translation="MTTDRTPHANRRVTLTDIAAGCNVSRATVSLVLRGSPLVNKHTR
                     ARVEEELRRQGYVYNRAAANLRRRTSSSVALVINDLANPFFAEFAAGVDEALGNAGYV
                     TLLGSTNESIDREQAVLGSLLEHDPAGIILSPAEGSAAERVLAAIGARTPLLLFNREL
                     AGSAPPEAPWDRLLLDNQRGARLATEHLIALGQKRIAFFGGHASSSSCQQRHAGYVEA
                     MNAAGLPIEAHWRVECAPNRVDAAAQCGALFFDNPRPTAAVCYNDAVALGLMLGLHQR
                     GIRPGRDFAVTGFDDIAESALSAPPLTTLASTPRARGRQAADMLLARLRDPQARPQRT
                     VAPVQLVARASSCPPPAA"
     gene            3261..>4090
                     /locus_tag="VFM52_05655"
     CDS             3261..>4090
                     /locus_tag="VFM52_05655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019182991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HET8764685.1"
                     /translation="MALGVITTVFFMWGLLTALNDILIPHLKSMFQLDYAQVMLVQST
                     FFGAYFLMSLPGGRLVARLGYKNGVVAGLVIAGFGALGFLPAAQMHSYGAFLAALFVL
                     ATGITVLQVAANPYVTLLGPERSSPSRLTLAQALNSLGTTLALGFGGMLILSAVVKTP
                     DAIAQLAPPEQLAYQAQQAHAVQGPYLGLAIALFLLAIFVWLFRLPALREATERADAT
                     PHGYRDVLRHPHVLFGVFGIFFYVGAEVSIGSFMVNYLALPEIGHISEQQASHYVSLY
                     "
BASE COUNT          598 a         1524 c         1337 g          631 t
ORIGIN      
        1 ggagtccgct cgcgggcgat gccctggctt cggccggcat cagcgcagca acattaccca
       61 gccggcccgc aggccaacgc cgtcaggcct gatcgatcgc ctgcagcgcc tgcaccagcg
      121 cacgcacctg ctgcacgtcg ctgcgcagct cgccgacctg catgtcggcc agccgctccg
      181 gtcgatggcg catgcgcgac gcgagctgga gcttggcgga ggcatggaac tcgcgcgccc
      241 cggtcgcagc cagcgcgaag agattgctgg cagtcacgcc ggcgccgggc atgacgacga
      301 ggcgacccgc tgcctgcgcg accagcgagc ggatcaatgt gatgccttcc atcgcgctgg
      361 cctgcccgcc cgaagtgagc acacgctcgc aacccagcgc gatcacgtcg gccaatgccc
      421 gccgtgggtc gcgaaccaga tcgaaggcgc gatggaaggt gacgccgagg cggcccgccg
      481 ccgcgatcag gctgcggcag cgttccacgt ccacctgccc ctcggcatcg agcacgccca
      541 gcaccacacc gtcgcagccc agcgccacgc aggtctcgat gtcgcgctgc atggcctcgc
      601 attcgaggtc gtcgtagaga aaatccccgg cgcgcgggcg gatcagcacg tatagcggaa
      661 tgcgcagccg ctcgcgcgcc atcgcgatgg tggcgtgcgc gggcgtgagg ccgcccagct
      721 ccagggcggt acacagctcc acccgccccg caccgcccgc ctgcgcggcg agcgcagagg
      781 ccaccgagtt ggcggccacc tccagcacac agccactcat gcgggaaaga cactcttcgc
      841 cgggatcagc gcacgctggt ccctggcatc gcacaccgca taggaaaacc cgggctggat
      901 cgcccacgcg ccgacctcgc catccttgtt catggcaagg aaacccacct ggatgtcctt
      961 cgcggtcttc ggcttcttgc gcacgatgcg catcaccgcc tcgtggcagg cttcggcggg
     1021 tgtgcggccc tggcgcatca gctccaccac caggaagctg cccgcgttgc ggatcacttc
     1081 ctcgcccacg ccggtggacg tcgcgccgcc cacctcgccg tccacgtaca ggccggcgcc
     1141 gatgatcggc gaatcgccca cgcggccgtg cagcttccat gccatgccgc tggtggtgca
     1201 ggcgccggcc agcttgccgt gcgcatccag cgccagcatg ccgatggtgt cgtggttgtc
     1261 cttgccgccg ggcaacccgg cggggacgcc ggcaccgtag tcgcgcacct cgctgttgat
     1321 caccggctgg taatgcgcgg tcttcagcca tgcgtgccac gccgcgtccg cctcgggcgt
     1381 cagcaggttt tccttcttga agctctgctc cagcgcgaac tgcagcgcgc cgtcgccggc
     1441 cagcagcacg tgcggcgtgc gttccatcac ccggcgcgcc accgagatcg cgtgggtgat
     1501 gtgctccatc gccgccaccc cgccacagtt gccctcggcg tccatgatgc tggcgtccag
     1561 cgtcaccttg ccgtcgcggt cggggtagcc gcccttgccg acgctgtggt tcctgaggtc
     1621 ggcctcgggc acgcgggcgc ccgcctcgac ggcatcgagc gcatggccct gcttgcccag
     1681 gatcgcccat gccgcctggt tggcggcgac gccgaaatcc caggtggaag ccacccgcac
     1741 ggtggccccg cggagcgcgg tggggatcga ttcggcggca tcgagccgcc gacccagcgc
     1801 cagcgccgaa acgccgagca aggaagtctg caggaaacgt cgacgatcgg tcacggccac
     1861 ctccacctgt tttcgggaat cgagatccgg cccgtgcccc tgccccgcag catgggtgcc
     1921 gggaagcggg gccgagctgg tagtgtgcgg gatgcagccg cccgaagcgg cttgcatgcg
     1981 tatttagatc gctccaaact aggtgcgcca gtggggactt gtcgatgatg taccgcttcg
     2041 ccaccccagc gcggccgatg tacggctctt ggtattttaa tcgttccaag ccatcaccca
     2101 gcaggccatg accaccgacc gcacacccca cgccaaccgc agggtcaccc tcaccgatat
     2161 cgccgccggc tgcaacgtct cgcgggccac cgtgtcgctg gtgctgcgcg gcagcccgct
     2221 ggtgaacaag cacacccgcg cccgcgtcga ggaggagctg cgccggcaag gctacgtgta
     2281 caaccgcgcc gccgccaacc tgcgccgacg cacctcgtcc agcgtggcgc tggtcatcaa
     2341 cgacctggcc aacccgttct ttgcggaatt cgccgccggc gtggacgagg cgctgggcaa
     2401 tgccggctac gtcaccctgc tgggcagcac caacgaatcg atcgaccgcg agcaggccgt
     2461 gctcggctcg ctgctggagc acgacccggc cggcatcatc ctgtcgccgg ccgaaggcag
     2521 cgcggccgaa cgcgtgcttg ccgccatcgg cgcgcgcacg ccgctgctgc tgttcaaccg
     2581 cgaacttgcc ggcagcgcgc cgcccgaggc gccatgggat cgcctgctgc tggacaacca
     2641 gcgcggcgcg cggctcgcca ccgagcacct gatcgcactg ggccagaagc ggatcgcgtt
     2701 cttcggcggc catgccagct ccagctcctg ccagcagcgc cacgccggct acgtcgaggc
     2761 gatgaacgcc gccggcctgc cgatcgaggc gcactggcgc gtcgaatgcg cgcccaaccg
     2821 tgtggatgcg gcggcgcaat gcggcgcgtt gttcttcgac aacccgcgcc ccacggcggc
     2881 ggtctgctac aacgacgcgg tggcgctggg cctgatgctt ggcctgcacc agcgcggcat
     2941 ccggcccggc cgcgatttcg ccgtcaccgg cttcgacgac attgccgagt ccgcgttgag
     3001 cgcgccgccg ctcaccacgc tggcgtccac gccgcgggcg cgtgggcgcc aggcggccga
     3061 catgctgctg gcgcgcctgc gcgacccgca agccaggccg caacgcacgg tcgccccggt
     3121 gcaactggtg gcacgcgcca gcagctgccc gccgcctgcc gcctgaaccc ctcctccgat
     3181 cgggaaaccg catgactacc ctcgttccac ccgctcttgc tcctgatgac ggcggcggcc
     3241 agcgctacac cgactacccg atggcgctgg gcgtcatcac caccgtgttc ttcatgtggg
     3301 gcctgctgac cgcgctcaac gacatcctca tcccgcacct gaaatcgatg ttccagctcg
     3361 attacgcgca ggtgatgctg gtgcagtcga cgttcttcgg cgcgtacttc ctgatgtcgc
     3421 tgccgggcgg ccggctggtg gcgaggctgg gctacaagaa cggcgtggtg gccgggctgg
     3481 tgatcgccgg gttcggcgcg ctcggcttcc tgccggcggc gcagatgcat tcctacggcg
     3541 cgttcctcgc cgcgctgttc gtgctggcca ccggcatcac cgtgctgcag gtggcggcca
     3601 atccctacgt caccctgctc gggccggagc gcagcagccc cagccggctc accctggcgc
     3661 aggcgctcaa ttcgctgggc accacgctgg cgctggggtt cggcggcatg ctgatcctgt
     3721 ccgcggtggt caagacgccg gacgcgatcg cccagctggc gccgccggaa caactcgcgt
     3781 accaggccca gcaggcgcac gcggtgcagg ggccgtatct cggcctcgcc atcgcgctgt
     3841 tcctgctggc gatcttcgtg tggctgttcc gcctgccggc gctgcgcgaa gccaccgagc
     3901 gggcggatgc cactccccac ggctatcgcg acgtgctgcg ccatccgcac gtgctgttcg
     3961 gcgtgttcgg catcttcttc tacgtgggcg ccgaggtgtc gatcggcagc ttcatggtga
     4021 actacctggc gctcccggag atcggccaca tcagcgagca gcaggcctcg cactacgtgt
     4081 cgctgtactg
//
LOCUS       DASSVL010000323         2213 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_276033, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000323 DASSVL010000000
VERSION     DASSVL010000323.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2213)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2213)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2213
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_276033"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..376
                     /locus_tag="VFM52_05660"
     CDS             <1..376
                     /locus_tag="VFM52_05660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008216291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="TraB/GumN family protein"
                     /protein_id="HET8764686.1"
                     /translation="PAMTQRANAWATGDLAALRELPDSHRRDACVSALTSAGFAHQLG
                     LDDVPTRLAATWLAAARKALAANATSFALLPMGELTSPHGYLAQLAAQGYTVTAPDVD
                     DDAPAPAASASSAVPGPPVVAR"
     gene            421..639
                     /locus_tag="VFM52_05665"
     CDS             421..639
                     /locus_tag="VFM52_05665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8764687.1"
                     /translation="MQRGIGLAPVALIAANVVAQDAPRQRPARRRACPLQWVIGGAGL
                     AEGTEGRSRAVDTRHADAAAEADAVAIA"
     gene            complement(1290..>2213)
                     /locus_tag="VFM52_05670"
     CDS             complement(1290..>2213)
                     /locus_tag="VFM52_05670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005989077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HET8764688.1"
                     /translation="NLVDTADVYSAWVPGHRGGESETIIGKWLARSGKRDQVLIATKV
                     GKWYQHAGLSPFNLRTALDASLRRLHTDHVDLYFAHQDDASIPTADILGEFSRLIEAG
                     KVRAIGASNFTAGRVEHALDIARRHGLPRYECLQPQYSLIERKAYETELEPLVRAEGV
                     GVVAYYALASGFLTGKCRSKRDLTRSHVRGQAVRGYLNPRGFAVLGALDAVAAAHRAT
                     PAQVALAWLVARPGVTAPIASATSAAQVQDLLGALTLELSAADLAQLDAASAAPTPQP
                     TVIVLPPGLAGVLEAGARSLPAPTSPGLSIR"
BASE COUNT          311 a          794 c          807 g          301 t
ORIGIN      
        1 gccggcgatg acccagcgcg cgaacgcgtg ggctaccggc gaccttgccg ccttgcgcga
       61 actgcccgac agtcatcgcc gcgatgcctg cgtcagcgcg ctgaccagcg ccggctttgc
      121 gcaccagctc ggcctcgacg acgtaccgac gcggctcgcg gcgacgtggc tggccgcggc
      181 gcgcaaggcg ctcgccgcca acgccaccag ctttgcgctg ctgccgatgg gcgaattgac
      241 ctcgccgcac ggctatctcg cacaactggc cgcgcagggc tacacggtga ctgcgccgga
      301 tgtggacgac gacgctccgg cgccggcggc gagcgcgtct tcagcggtgc cgggcccgcc
      361 cgtcgtcgcg cgctaggacg tggcgccgca tgacgtgcgg caccctccgg ggagcggccc
      421 atgcagcgcg gcatcggatt ggcgccggtg gccctgatcg cggcgaacgt cgtcgcccag
      481 gatgccccgc gccagcggcc agcacggcga agggcctgcc cgctgcagtg ggtgatcggc
      541 ggggctgggt tggcggaagg taccgagggg cgatcacgtg ccgtggatac ccggcacgct
      601 gacgccgccg ccgaagcgga tgcggtggca atcgcatgac ggcgggacag ccatgccggc
      661 ttcgcggccg gtgcccgaac cgccgggcgt cgcgctgcac gtggagcccg gtttcctcgg
      721 caagctcgcg ttgctgccgt gcccgatccg gatccgcgac gacccggatg gcaagcggcg
      781 cgtcgacgtg ccgtcgccgg acgaccgcgc gcgggcaggc gctcaaaccg cgccacctcg
      841 gcagcgggcg caaggtggag aaattccgcg cgctgttcgc cggcctcgat ctccacgaag
      901 cggcggtcaa ggccgccggc ctggacaaca ccgacatcgc cggcgagctg gtcgccaagc
      961 tggccaagca gcatgcgata ccggtggtgg acaccagcta ccgcttcacc atggccgacc
     1021 ccaggcgcgc gaacggcgat tttcgccacg gcggcatgcg ggacacggcc tgcttcgagg
     1081 gcttgcccga ccgcgtcgag cacggcgtgc cgcggatgga ggtgcaggcc aacgcctggg
     1141 ccaccggcac cgcctgcgcc gaagccttcg gcggcgccga tttcgcgcgc cagcaggggc
     1201 tgaccgacct gcgccaccac gttcgcgctg ctgccggtcg acgaaatgtt cgccggcgac
     1261 ggccttctgg cgcggctcga ggccgacggc taccggatcg aaagcccggg cgaggtcggc
     1321 gccggcagcg acctcgcgcc ggcttcgagc acgccggcca gccccggcgg cagcacgatg
     1381 accgtcggct gaggcgttgg cgcggcgctg gctgcgtcca gctgcgcaag gtcggcggcg
     1441 gagagctcca gcgtcaacgc gccgagcagg tcctgcacct gcgcggcgct ggtcgcgctt
     1501 gcgatcggcg cggtgacgcc gggccgcgcg accagccacg ccagcgccac ctgtgcgggc
     1561 gtcgcgcgat gcgcggcggc aaccgcgtcg agcgcaccca gtaccgcgaa cccgcgcggg
     1621 ttcaggtaac cccgcaccgc ctgcccgcgc acgtggctcc gcgtgagatc gcgcttactg
     1681 cggcacttgc cggtgaggaa gccactggcc agcgcgtagt aggcgacgac gccgacgcct
     1741 tcggcgcgca ccaggggttc gagttccgtc tcgtacgcct tgcgttcgat caggctgtac
     1801 tgcggctgca ggcattcgta gcgcggcagg ccatgccggc gtgcgatgtc cagcgcgtgc
     1861 tcaacgcgcc cggcggtgaa gttcgaggcg ccgatcgcgc gcaccttgcc cgcctcgatc
     1921 agccgcgaaa actcgccgag gatgtcggcc gtggggatac tggcatcgtc ctggtgcgca
     1981 aagtagaggt cgacgtggtc ggtgtggagc cggcgcagcg aggcgtcgag cgcggtgcgc
     2041 aggttgaacg gcgacagccc ggcatgctgg taccatttgc cgaccttggt cgcgatcagc
     2101 acctggtcac gcttgccgct tctggcgagc cacttgccga tgatcgtttc cgactcgccg
     2161 ccgcggtggc ccggcaccca ggccgagtac acatcggcgg tgtcgaccag gtt
//
LOCUS       DASSVL010000324         8317 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_487875, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000324 DASSVL010000000
VERSION     DASSVL010000324.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 8317)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8317)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8317
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_487875"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..725)
                     /locus_tag="VFM52_05675"
     CDS             complement(<1..725)
                     /locus_tag="VFM52_05675"
                     /inference="COORDINATES: protein motif:HMM:NF012257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030551 - cyclic nucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic nucleotide-binding domain-containing
                     protein"
                     /protein_id="HET8764689.1"
                     /translation="MQPRDLPELIRHTSIFAHLDEAQRTALAERMRWLCLPGGKHLFR
                     AGEPADALYLLRSGSLGVFDGPTRLIHQLVAGDCAGEISLVSGGNHHLSVRALRDSEL
                     LRLDGRAFEALVEHQPETMLAVARIATQRLLQNLQGPPTPNRPRTFALLPVDTGVPVR
                     ELAHRLGAAMEAWGSCLVIDAEHGRGRGSDWFAEREAQAQFVVYVDDIGEPAWRQRCL
                     RQADVLLLPALADQPPRPWPEAAP"
     gene            825..2882
                     /locus_tag="VFM52_05680"
     CDS             825..2882
                     /locus_tag="VFM52_05680"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008438717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M3 family metallopeptidase"
                     /protein_id="HET8764690.1"
                     /translation="MTNQNPLLEDAVLPAFSRIRPEHVLPAIDAILADDRAAIAAITA
                     PGAPRDFDRVMLVQERLDQRLSRAWAPVSHLHSVADTPALREVYGPADEKLTDYALEQ
                     GQNRELYAAVKAVADAPTFAALDRPRRALVEHALRDFRLSGVALEEPARSRFRAIGVE
                     LSKLATEFSNAVLDATDAWREHVADETQLAGIPESGRAVLRQYAKEQDLDGWLVTLKQ
                     PSVQAVMTYADDRALRERVYRAYQTRASDQGPNAGQFDNSARIEKIIALRHEAAQLLG
                     FANAAEESLATKMAGSPAEVLAFLHDLVARAKPVAQRELAELRVFAAEELGIPELEAW
                     DTAYASEKLRIKHYALDEEQLKPYFPLPAVIDGLWAITGKLYGITLRARAGVDTWHPD
                     VRYYDAVDADGRVFAGVYVDLYARTGKRGGAWMDVCRARFDDGAEKQLPVAYLTCNFA
                     PPTEGRPALLTHDDVLTLFHEFGHTLHHLLTRITLPSIGGIDGVEWDAVELPSQFMEN
                     FGWNREALDLFARHWQTGEKLPEELFQRMLAARHYHAGMFLVRQLEFGLFDFTLHLGY
                     DPARGARALEVLDAVRQEVAVLIPPAWHRFPHAFAHIFAGGYAAGYYSYLWAELLSAD
                     AFSAFEDAARASGSVIDAATGARFRKEFLAVGASRPALESFIAFRGREPRPDALLASY
                     GLG"
     gene            complement(2943..3152)
                     /locus_tag="VFM52_05685"
     CDS             complement(2943..3152)
                     /locus_tag="VFM52_05685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016488765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0001072 - transcription antitermination
                     factor activity, RNA binding [Evidence IEA];
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein"
                     /protein_id="HET8764691.1"
                     /translation="MSERQSGTVKWFNDAKGYGFITPESGEDLFVHFRAIQGTGFKSL
                     AEGDHVTFVVTKGPKGFQAEEVQKA"
     gene            3344..4123
                     /gene="xth"
                     /locus_tag="VFM52_05690"
     CDS             3344..4123
                     /gene="xth"
                     /locus_tag="VFM52_05690"
                     /EC_number="3.1.11.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017461700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008311 - double-stranded DNA 3'-5' DNA
                     exonuclease activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease III"
                     /protein_id="HET8764692.1"
                     /translation="MKIASWNVNSLKVRLPHLLQWLDEAQPDVVALQETKLEDAKFPV
                     AELAAAGYHTVFSGQKTYNGVAILAREALGTPADVVTDIPGLDDPQRRILAASIGGLR
                     VVDLYVVNGKAVGDEKYAYKLRWLERVRDFLAAEIAANPRLVVLGDFNIAPDDRDVHD
                     PEAWGEDILCSPPERRALKAITDLGLADSFRLFEPDAGHYSWWDYRQGAFRRNIGLRI
                     DLILIGEALKAHATAAAIDREPRRWERPSDHTPVTLELDLP"
     gene            4120..4797
                     /locus_tag="VFM52_05695"
     CDS             4120..4797
                     /locus_tag="VFM52_05695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015449193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YecA family protein"
                     /protein_id="HET8764693.1"
                     /translation="MTTSQADWPSSLSDEELGELDRYLRAHAQEGDGHLLLDGVHGML
                     SLLAVGPLEVLPDEWLPEVLHEPFGDEAEGNRVLALLAKLNDSIGAELDVDAYEPILG
                     EIDTEHGPQLSAAGWCEGFSRGIDLRANLWEARLANDPALMDALSPVMALAVDEGVLH
                     TDAEIARLSDDEYEDCLAQVSNVLDAVGRYWQDKPATEAEIEAMAEAASQESTPPPRH
                     RGEHWVH"
     gene            4906..5739
                     /locus_tag="VFM52_05700"
     CDS             4906..5739
                     /locus_tag="VFM52_05700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007512197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pirin family protein"
                     /protein_id="HET8764694.1"
                     /translation="MTERRILRRVRGMPTADGAGVKLTRVIGQPTLDHVDPFLLLDEF
                     RSDSADDYIAGFPEHPHRGFETVTYMLAGHMRHGDNHGNRGDLGPGSVQWMTAGRGIL
                     HSEMPMQEDGLMWGFQLWVNLPAKDKMTAPRYQDIAADRIPVVHPAPGVTARVIAGEF
                     AGATGPVNGIPTEPLYLDLTVEPGAQVTVPLPPEHRAFAYVFDGAAAEVGRERLARSE
                     LAVLGNGDRLRIAGGEATTRLLVVAGRPLNEAITRYGPFVMNTPEEIRTAVADYQAGR
                     F"
     gene            6030..6497
                     /locus_tag="VFM52_05705"
     CDS             6030..6497
                     /locus_tag="VFM52_05705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007809912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPFH domain-containing protein"
                     /protein_id="HET8764695.1"
                     /translation="MNVMDAWLILLLVTVAVLLASAVRRVPAGRVYSVYRRGKLVRVL
                     GAGTHLIQPWRDRVRHKIDLAGQTLTLDEPLDERRELRGTVYWQVLEPERVDAVIDEV
                     DQLIRRGAQEALRAQAPKVLADRRDAGIHVKQTLNSTLRPRGMLVTRVELEAA"
     gene            6597..7244
                     /gene="rsmG"
                     /locus_tag="VFM52_05710"
     CDS             6597..7244
                     /gene="rsmG"
                     /locus_tag="VFM52_05710"
                     /EC_number="2.1.1.170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019464152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005575 - cellular_component [Evidence
                     IEA];
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0031167 - rRNA methylation [Evidence IEA];
                     GO_process: GO:0046118 - 7-methylguanosine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(527)-N(7))-methyltransferase
                     RsmG"
                     /protein_id="HET8764696.1"
                     /translation="MTSRTDLAARLDHGVTALQLSLPAGAGERLLDYVELLTRWNAAY
                     NLTAVRDPAEMVTRHVLDSLAILPHVTGETLADLGTGPGLPGLVLAIAAPRREVLLVD
                     SNGKKVRFLREAIRSLKLAGVRAEQARVEDVPGQFDCVTARAFASLADMLAWGGHLLA
                     PGGTWLAMKGKLADEELAGVPPAFTVAGVRTLAVPGLDAERHLVVLRRAGAGAAC"
     gene            7279..8115
                     /locus_tag="VFM52_05715"
     CDS             7279..8115
                     /locus_tag="VFM52_05715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008215348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ParA family protein"
                     /protein_id="HET8764697.1"
                     /translation="MARILAVANQKGGVGKTTTAVNLAAALAAAKRRVLLVDLDPQGN
                     ATMASGIDKRTASPNGCAVLLEEAGVLDAVVTTESHFDLLPGNGDLTAAELKLMDAMA
                     REHRLHERLAPVADRYDLILIDCPPSLNLLTLNALTAADGVLIPVQCEYFALEGLSSL
                     LETVKAVRQRLNHRLEIEGILRTMYDVRNNLGNEVSAQLTTHFGDKVLRSIIPRNVRL
                     AEAPSHGQPIHLYDRSSRGAIAYIGLAGEIIRRERGIAAAAAAGEAHEALLAASASHH
                     QD"
     gene            8119..>8317
                     /locus_tag="VFM52_05720"
     CDS             8119..>8317
                     /locus_tag="VFM52_05720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017461716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParB N-terminal domain-containing protein"
                     /protein_id="HET8764698.1"
                     /translation="MAAKKRGLGRGLDALLGGDDTSAAVLEQEGELRTLPIGHIQPGK
                     YQPRRHWNDEALDELAASIKAQ"
BASE COUNT         1309 a         2942 c         2817 g         1249 t
ORIGIN      
        1 ggcgccgcct ccggccacgg ccgcggcggc tggtcggcga gtgccggcaa cagcagcacg
       61 tcggcctggc gcaggcagcg ctggcgccac gccggctcgc cgatgtcgtc cacgtacacc
      121 acgaactgcg cctgcgcctc gcgttcggca aaccagtcac tgccacggcc gcggccatgc
      181 tcggcgtcga tcaccaggca actgccccac gcctccatcg ccgcgccgag ccgatgcgcc
      241 agctcacgca ccggcacccc ggtgtcgacc ggcagcagtg cgaaggtgcg cggacggttc
      301 ggcgtcggcg ggccctgcag gttctgcagc agccgctggg tggcgatgcg cgccaccgcc
      361 agcatcgtct ccggctggtg ttcgaccagc gcctcgaacg cgcggccgtc cagccgcagc
      421 agttcggagt cgcgcaacgc gcgtaccgac aggtgatggt tgccgccgga aaccaggctg
      481 atctcgccgg cgcaatcccc ggccaccagc tggtggatga gccgggtcgg gccgtcgaac
      541 acgccgagac tgccgctgcg cagcaggtac agcgcatcgg ccggctcgcc ggcacggaac
      601 aggtgcttgc cgccgggcag gcacaaccag cgcatgcgtt cggcgagcgc cgtgcgctgg
      661 gcctcgtcca ggtgcgcgaa gatcgaggtg tgccggatca gttcgggcag gtcgcgcggc
      721 tgcatgccgg cgatgctacg ccggcggcag gtgacggcga tgttgccgcg cgcttgattt
      781 cggtgcgcac catcaccacg ctttcgcgat accaaggagt tgtcatgacc aaccagaacc
      841 cgctgctgga agatgccgtg ctgccggcgt tttcacgcat ccgccccgaa cacgtgctgc
      901 cggcgatcga cgccatcctt gccgacgacc gcgccgcgat cgcggccatc accgcgcccg
      961 gcgcgccgcg cgatttcgac cgcgtgatgc tcgtgcagga gcgcctcgac cagcgccttt
     1021 cccgcgcgtg ggcgccggtg tcgcacctgc actcggtggc cgataccccg gcgctgcgcg
     1081 aggtctacgg cccggccgac gagaagctca ccgactacgc gctcgaacag ggccagaacc
     1141 gcgagctgta cgccgcggtc aaggcggtgg ccgatgcgcc gacgttcgcc gcgctcgatc
     1201 gcccgcggcg cgcgctggtc gaacatgcgc tgcgcgattt ccggctttcc ggcgtggcgc
     1261 tggaggagcc ggcgcgctcg cgcttccgcg cgatcggcgt cgagctttcg aagctcgcca
     1321 ccgagttttc caacgccgtg ctggatgcga ccgacgcctg gcgcgagcac gtcgccgatg
     1381 aaacccagct ggccggcatc cccgaatccg gccgcgcggt gctgcgccag tatgccaagg
     1441 agcaggatct cgacggttgg ctggtcacgc tgaagcagcc cagcgtgcag gcggtgatga
     1501 cctatgccga cgaccgcgcg ctgcgcgagc gggtgtaccg cgcctaccag acgcgcgcct
     1561 ccgaccaggg cccgaacgcc ggccagttcg acaactccgc gcggattgaa aagatcatcg
     1621 cgctgcgcca cgaggccgcg cagctgctgg gcttcgccaa tgccgcggaa gaatcgctgg
     1681 ccaccaagat ggccggttcg ccggccgagg tgctggcgtt cctgcacgac ctcgtcgcgc
     1741 gcgccaagcc ggtcgcgcag cgcgaattgg ccgaactgcg cgtgttcgcg gccgaggaac
     1801 tcggcatccc cgagcttgaa gcctgggaca ccgcctacgc ctcggaaaaa ctgcgcatca
     1861 agcactacgc gctggacgag gagcaactca agccgtactt cccgctgccg gcggtgatcg
     1921 acggcctgtg ggcgatcacc ggcaagctct acggcatcac gctgcgcgcg cgcgccggcg
     1981 tcgatacctg gcaccccgac gtgcgctatt acgacgccgt ggatgccgac ggccgggtgt
     2041 tcgccggcgt ctacgtcgat ctctacgcgc gcaccggcaa gcgcggcggc gcgtggatgg
     2101 acgtgtgccg cgcgcgcttc gacgacggtg cggaaaagca gttgccggtg gcctacctca
     2161 cctgcaactt cgcgccgccg accgagggcc gccccgcgct gctcacccac gacgatgtgc
     2221 tcaccctgtt ccacgagttc ggccacacgc tgcatcatct gctgacgcgc atcacgctgc
     2281 cctcgatcgg cggcatcgac ggcgtggagt gggacgcggt cgagctgccc agccagttca
     2341 tggaaaactt cggctggaac cgcgaggcgc tggatctctt cgcgcgccac tggcagaccg
     2401 gcgagaagct gccggaggaa ctgttccagc gcatgctggc ggcgcgccat taccacgccg
     2461 gcatgttcct cgtgcgccag ctcgagttcg gcctgttcga tttcaccctg cacctgggct
     2521 acgacccggc gcgcggtgca cgcgcgctcg aagtgctgga tgcggtgcgc caggaagtgg
     2581 cggtgctgat cccgccggcg tggcaccggt tcccgcatgc gttcgcccac atctttgccg
     2641 gcggctacgc ggccggctac tacagctacc tgtgggccga gctgttgtcg gccgacgcgt
     2701 tcagcgcctt cgaggatgcc gccagggcga gcggcagcgt gatcgacgcg gcgaccggcg
     2761 cccgcttccg caaggagttt ctcgcggtcg gcgcgagccg cccggcgctg gaaagtttca
     2821 tcgccttccg cggccgcgag ccgcggccgg acgccttgct cgccagctac ggacttgggt
     2881 gaggcaccac aaaaaagaaa cccgccttgc ggcgggtttc ccatacggca gcctgggcag
     2941 gcttaggcct tctgtacttc ttcggcctgg aagcccttcg gccccttggt cacgacgaag
     3001 gtgacgtggt caccctcggc cagcgacttg aagccggtgc cctggatggc gcggaaatgc
     3061 acgaacagat cctcgccgct ttccggcgtg atgaagccgt agcccttcgc gtcgttgaac
     3121 cacttgaccg taccgctttg acgttccgac atgacacata cctttgaaac atgagtgact
     3181 gcgggtggcg cgcatgcgcc gaccgcaact ggcgcaggaa acccgagtcc tccccggtcc
     3241 ttgccggcgc gagcatacat ggaaaaagcc agtggcggcg cggttttctc gttgccggtt
     3301 caggtacgga gagccggctc cccccatccc gtagaatgca ggcatgaaaa tcgcctcgtg
     3361 gaacgtgaac tcgctcaagg tgcgcctgcc gcaccttctg caatggctgg acgaggccca
     3421 gcccgacgtc gtggcgctgc aggaaaccaa gctcgaggat gcgaaattcc ccgtcgccga
     3481 gctggcggcc gcgggctacc acacggtgtt ttccggccag aagacctaca acggcgtggc
     3541 gatcctcgcg cgcgaggcgc tggggacgcc agccgatgtg gtcaccgaca tccccggcct
     3601 ggacgacccg cagcggcgca tcctcgcggc cagcatcggc ggcctgcgcg tggttgacct
     3661 gtacgtggtc aacggcaagg cggtgggcga cgagaaatac gcctacaagc tgcgctggct
     3721 cgaacgcgtg cgtgatttcc tcgccgcgga aatcgccgcc aacccgcggc tggtggtact
     3781 cggcgacttc aacatcgccc ccgacgaccg cgacgtgcac gatccggagg cctggggcga
     3841 ggacatcctg tgctcgccgc ccgagcgacg cgcgctcaag gcgatcaccg acctcggcct
     3901 cgccgacagc ttccgcctgt tcgagccgga cgcgggccac tacagctggt gggattaccg
     3961 ccagggcgcg ttccgccgca acatcggcct gcgcatcgac ctcatcctca ttggcgaagc
     4021 gctcaaggcg catgccaccg ccgccgcaat cgaccgcgaa ccgcgccgct gggagcgccc
     4081 ctcggaccac acgccggtga cgctggagct ggacctgcca tgaccaccag ccaggccgat
     4141 tggccgagtt cgctcagcga cgaggagctt ggcgagctgg accgctacct gcgcgcgcat
     4201 gcgcaagaag gcgatggaca cctgctgctc gacggcgtgc acggcatgct cagcctgctg
     4261 gccgtcggcc cgctcgaagt gctgcccgac gagtggctgc ccgaggtgct gcacgagccg
     4321 ttcggcgacg aggcggaagg caaccgcgtg ctggcactgc tggccaagct caacgactcg
     4381 atcggcgccg agctcgacgt ggatgcgtac gagccgattc tcggcgagat cgacaccgaa
     4441 cacggcccgc agctttccgc cgccgggtgg tgcgagggtt tcagccgcgg catcgacctg
     4501 cgcgcgaacc tgtgggaggc gcggctggcc aacgacccgg cactgatgga tgcgctcagc
     4561 ccggtgatgg cgctggcggt cgacgaaggt gtgctgcaca ccgatgccga gatcgcgcgg
     4621 ctgagcgacg acgaatacga ggattgcctg gcccaggtgt cgaacgtgct cgatgccgtc
     4681 ggccgctact ggcaggacaa gccggccacc gaggcggaaa tcgaggcgat ggccgaggcc
     4741 gccagccagg agagcacccc gccgccgcgc caccgcggcg aacactgggt gcattgaacc
     4801 cgccgcactt ccgcgcaaaa ccggaacaat ccgttcccgc cgccgctctt ggctcccgcc
     4861 aggcaagcgc gcatcttgcg tgcatcactt ccacggagca tggccatgac cgaacgtcgc
     4921 atccttcgcc gcgtgcgcgg catgccgact gccgacggcg ccggcgtcaa gctgacccgc
     4981 gtcatcgggc agccgacgct cgaccacgtc gatccgttcc tgctgctcga cgaattccgc
     5041 tcggacagcg cggacgacta cattgccggt tttcccgagc acccgcatcg cggcttcgag
     5101 accgtcacct acatgctggc cgggcacatg cgccacggcg acaaccacgg caaccggggc
     5161 gacctcggcc ccggcagcgt gcagtggatg accgccgggc gcggcatcct gcattcggag
     5221 atgccgatgc aggaggacgg cctgatgtgg ggcttccagc tgtgggtcaa cctgcccgcg
     5281 aaggacaaga tgaccgcccc gcgctaccag gacatcgccg ccgaccgcat tccggtcgtg
     5341 cacccggccc cgggcgtcac cgcgcgcgtg atcgccggcg agttcgccgg cgcaaccggc
     5401 ccggtcaacg gcattcccac cgaaccgctg tatctcgacc tgacggtcga gcccggcgcc
     5461 caggttacgg tgccgctacc gcctgaacat cgcgcattcg cctacgtgtt tgacggcgcg
     5521 gccgccgagg tcggccgcga gcggctggcg cgcagcgaac tggcggtgct cggcaacggc
     5581 gaccgcctgc gcattgccgg cggcgaggcg accacgcggt tgctggtggt cgccgggcgg
     5641 ccgctcaacg aggcgatcac ccgctacggg ccattcgtga tgaacacgcc cgaggaaatc
     5701 cgcaccgcgg tggcggacta ccaggccggg cggttctgac ggccgtttcg ggccgttcgg
     5761 cctgatcgcc ccctttgcgg ggcgcccatc gcccgcgtgc gggctccttc ggcggcggtc
     5821 gcgtttggcg cggccgccgt ctggcatgtg ccatgcagct caagcggagg gcggggatgt
     5881 cgattccctg aacagggggc ggaactgcaa accagatcgc ttgtcaagtt cgttgggatg
     5941 tcgttaaatc ccagttaacg cttcgacttc atgaagatcg gtcatgaagt tgtagccgaa
     6001 tctcatcaac catctgcaac ctgttgtcgg tgaacgttat ggatgcctgg ctgatccttc
     6061 tgctagtgac cgttgccgtg ctgctggcca gcgccgtgcg ccgcgtgccg gctggcaggg
     6121 tgtacagcgt ctatcggcgc ggcaagctgg tgcgcgtgct gggcgccggc acccacctga
     6181 tccagccgtg gcgtgaccgg gtgcgtcaca agatcgacct ggcggggcag acgctcacgc
     6241 tggacgagcc gctcgacgag cgccgcgaac tgcgcggcac ggtgtactgg caggtgctgg
     6301 aacccgagcg cgtggacgcg gtgatcgacg aggtcgacca gctcatccgc cgcggcgcgc
     6361 aggaagcgct gcgcgcgcag gcgccgaagg tgttggccga ccgccgcgat gccggcatcc
     6421 acgtcaagca gaccttgaac agcacgctgc gcccgcgcgg catgctggtg acccgggtcg
     6481 agctcgaagc ggcctgagcg ccgcgcccgg cgtccctgcg aacccgccat ccggcgggtt
     6541 ttcgtttttg cgggtgccgc cggatactgt ccgaccctgt tgccgacccg ccccgcatga
     6601 cttcccgcac cgaccttgcc gcccgcctcg accacggcgt cactgccctg cagctcagcc
     6661 tgcccgccgg tgccggcgag cggctgctcg attacgtgga gctcctgacg cgctggaatg
     6721 cggcctacaa cctcacggcg gtgcgcgacc cggccgagat ggtgacccgc cacgtgctcg
     6781 attcgctggc aatcctgccg cacgtcacgg gcgaaaccct ggccgatctc ggcaccggcc
     6841 ccggcttgcc cggcctggtg ctggcgatcg cggcgccgcg gcgcgaggtg ctgctggtgg
     6901 actccaatgg caagaaggtg cgcttcctgc gcgaggcgat ccgcagcctg aaactggccg
     6961 gcgtgcgcgc cgagcaggcg cgggtcgagg acgtgccggg gcagttcgac tgcgtcaccg
     7021 cgcgcgcgtt cgcgagcctc gccgacatgc tcgcctgggg tgggcacctg ctcgcgccgg
     7081 gcggcacctg gctggcgatg aagggcaagc tggcggacga ggagctggcc ggcgtgccgc
     7141 ccgccttcac ggtcgccggg gtgcgcacgc tggcggtgcc ggggctcgac gccgagcgcc
     7201 atctcgtcgt gctgcgccgg gctggcgcgg gtgcggcctg ctaatctagg cctcctttcg
     7261 cgcactcgaa acgagcccat ggcacgcatt ctcgccgtcg ccaaccagaa aggtggcgtc
     7321 ggcaagacca ccacggcagt caatctcgca gcagccctgg ccgccgcgaa gcgccgcgtg
     7381 ctgctcgtcg atctcgaccc gcaaggcaat gccacgatgg cttccggcat cgacaagcgc
     7441 accgccagcc cgaatggctg cgcggtgttg ctggaggaag ccggcgtgct cgacgcggtg
     7501 gtcaccaccg agtcgcattt cgacctcttg cccggcaacg gcgacctcac cgccgccgag
     7561 ttgaaattga tggacgcgat ggcgcgcgag catcgcctgc acgagcgcct ggcgccggtg
     7621 gccgaccgct acgacctgat cctgatcgac tgcccgccgt cgctgaacct gctgacgctc
     7681 aacgcgctta ccgcggccga cggcgtgctg attccggtgc agtgcgaata cttcgcgctc
     7741 gaagggctgt cgagcctgct ggagacggtc aaggcagtgc gccagcggct caaccaccgg
     7801 ctcgagatcg aaggcatcct gcgcaccatg tacgacgtgc gcaacaacct cggcaacgag
     7861 gtttccgcgc agctcaccac gcatttcggc gacaaggtgc tgcgctcgat catcccgcgc
     7921 aacgtgcgcc tggccgaggc gccgagccac ggccagccga tccatctcta cgaccgcagc
     7981 tcgcgcggcg cgattgccta catcgggctg gccggcgaga tcatccgccg cgaacgcggc
     8041 atcgccgccg cggcggcggc aggcgaggcc cacgaagcgc tgctcgcggc gtccgcgtcg
     8101 catcatcagg actgaggcat ggctgcaaag aaacggggct tgggacgcgg gctggacgcg
     8161 ctgctcggtg gcgacgacac gtcggccgcg gtgctcgaac aggaaggcga gctgcgcacg
     8221 ctgcccatcg ggcacatcca gcccggcaag taccagccac gccggcactg gaacgacgag
     8281 gcgctggacg aactggcggc atcgatcaag gcgcagg
//
LOCUS       DASSVL010000325         2588 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_63937, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000325 DASSVL010000000
VERSION     DASSVL010000325.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2588)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2588)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2588
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_63937"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..448)
                     /locus_tag="VFM52_05725"
     CDS             complement(<1..448)
                     /locus_tag="VFM52_05725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017462882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_component: GO:0033573 - high-affinity iron permease
                     complex [Evidence IEA];
                     GO_function: GO:0005381 - iron ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0034755 - iron ion transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FTR1 family protein"
                     /protein_id="HET8764699.1"
                     /translation="MPGVALLVFREVLEAALIVSIVCAATRGVRWRGAYVAGGIGLGL
                     VGAMLVALGAGAIARLASGSGQELLNAGVLLAAVAMIGWHVLWMSRHARELAQHMSAV
                     GAAVKAGSSSLTLLLAVVALAVLREGSEVVLFLYSMAMGGIGAAGLA"
     gene            complement(453..779)
                     /locus_tag="VFM52_05730"
     CDS             complement(453..779)
                     /locus_tag="VFM52_05730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017462881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupredoxin domain-containing protein"
                     /protein_id="HET8764700.1"
                     /translation="MNRPAILAILLLSGFAAHAGEVPEFHLAIQGHAFQPAELKVPAG
                     TKFKLVVENRDAAPEEFESTEFGREKIVLPNSTADVFIGPLKPGSYRFFGDFHQDTAQ
                     GRLIVE"
     gene            complement(1117..1428)
                     /locus_tag="VFM52_05735"
     CDS             complement(1117..1428)
                     /locus_tag="VFM52_05735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019465179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6587 family protein"
                     /protein_id="HET8764701.1"
                     /translation="MSSGLLAQYVILGLIVLASVLVVVRKLAPQLTNRWLAAASIHFA
                     RKRDSRLAQSLSRRLQPRQATGNCADGCATCGACGPKPPATARPAGVEPLPLGFRPRR
                     K"
     gene            complement(1425..>2588)
                     /locus_tag="VFM52_05740"
     CDS             complement(1425..>2588)
                     /locus_tag="VFM52_05740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007804837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0015093 - ferrous iron transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006826 - iron ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferrous iron transporter B"
                     /protein_id="HET8764702.1"
                     /translation="AILALVMFLVFQAVYSLGKPLTDLIGDGFGWLGGHVAAWLPAGP
                     LQGLVSEGIFGGLGTVLGFLPEILVLFFFILTLEESGYLPRAAFLLDRLMVSVGLTGR
                     SFIPLLSSFACAIPGIMGTRSITDPRDRLATILVAPLMTCSARLPVYALLIAAFIPAH
                     AVLGVFNLQGLVLFALYAAGIAGAMLVGWVMKRVRRDQGEHALLMELPSYRLPKARDV
                     AIGLYERGMIFLKRLTGVILALTVLMWVLSSFPGAPAGATEPAIDYSFAGHLGHWLAY
                     PFAPIGFNWQMSLALIPAFAARETAVAALATVYAVGGDAGQLAPALAAHVSLASALSL
                     LVWFAYAPQCMSTLAVIRRETNSWRIVAISFGYQFVMAYAASFLVYQVASALA"
BASE COUNT          460 a          908 c          913 g          307 t
ORIGIN      
        1 cggccagacc cgccgcgccg atgccgccca tcgccatcga gtagaggaac agcaccacct
       61 cggagccctc gcgcagcacc gccagcgcca ccaccgccag cagcagggtg agtgagctgg
      121 agccggcctt caccgccgct ccgaccgcgc tcatgtgctg ggccagttcg cgcgcatggc
      181 gggacatcca cagcacgtgc cagccgatca tcgccaccgc ggcaagcagc acgccggcat
      241 tgagcagttc ctgccccgag ccgctggcca gccgcgcgat ggcgccggcg cccagcgcca
      301 ccagcatcgc gccgaccagg ccgaggccga tgccgccggc cacgtacgcc ccgcgccagc
      361 gcacgccacg cgtggcggca cagacgatgg agacgatcag tgccgcttcc agcacctcgc
      421 gaaacaccag cagcgctacg cccggcatgg catcactcca cgatcagccg gccctgggcc
      481 gtgtcctggt ggaagtcgcc gaagaagcgg tagctgcctg gcttgagcgg gccgatgaag
      541 acgtcggccg tgctgttcgg cagcacgatc ttctcgcggc cgaactcggt gctctcgaac
      601 tcctcgggcg ccgcgtcgcg gttttcgacc accagcttga acttggtgcc ggccggcacc
      661 ttgagctccg ccggctggaa cgcgtggccc tggatggcga gatggaactc gggaacctcg
      721 ccggcgtgcg cggcgaagcc cgaaagcagc aggatggcga gaatggcggg acggttcacg
      781 cgacggatcc ggatcgggaa ggtgtgcgaa tgataatgga tctcatcacg agccgcaatt
      841 tgccgcccgt ctccacgcgg cgtttcggca gcgatccggg tgcggcgaat cagcgcaggg
      901 gcacgcatac gcgaccggga cgcccccgtc gatgatccag ccgcctcact ggcggcccac
      961 ggtcaaccta cccaaccacg gcgcaccgga tcggccaccg cgccgcacga ggttcgacgc
     1021 aaacgtccgc ccgtcgtgcc tgcgggtggc ggccggacgt cgccgacgtg tgtccggcgg
     1081 tacgtgccgc catcgccacc gcgcgcccgg ccggacctac ttccggcggg ggcggaaacc
     1141 gagcggcaac ggctccacgc cggccgggcg cgccgtcgcg ggcggtttcg gcccgcaggc
     1201 gccgcaggtg gcgcagccgt cggcgcagtt gccggtggcc tgcctgggtt gcaggcggcg
     1261 gctgagcgat tgcgccaggc gcgaatcgcg cttgcgcgcg aagtggatgg aagcggccgc
     1321 cagccagcga ttggtgagct gcggcgcgag cttgcgcacg accaccagca cgctggccag
     1381 cacgatcagg ccgaggatga cgtattgcgc caggagtccg ctgctcatgc cagtgcgctc
     1441 gcgacctggt agacgaggaa ggaggccgcg taggccatca cgaactggta gccgaaggag
     1501 atggccacga tgcgccagga gttggtttcg cgccggatga cggccagcgt ggacatgcac
     1561 tgcggcgcat aggcgaacca caccaagagc gacagcgcgc tggccagcga cacgtgcgcg
     1621 gccagcgccg gcgcgagctg gccggcgtcg ccgcccaccg catacaccgt ggccagcgcg
     1681 gccaccgccg tttcgcgcgc ggcaaaggcg gggatcagcg ccaggctcat ctgccagttg
     1741 aagccgatcg gcgcgaaggg gtacgccagc cagtggccga ggtggccggc gaagctgtag
     1801 tcgatggctg gctcggtggc gcccgccggc gcgccgggga aactggagag cacccacatc
     1861 agcacggtga gcgcgaggat cacgccggtc agccgcttca ggaagatcat gccgcgctcg
     1921 tacaggccga tggccacgtc gcgcgccttg ggcagccggt aggacggcag ctccatcagg
     1981 agcgcatgct cgccctggtc gcggcggacg cgcttcatca cccagcccac cagcatggcg
     2041 ccggcaatgc cggctgcgta gagcgcaaac agcaccaggc cttgcaggtt gaacacgccc
     2101 agcaccgcat gggcggggat gaaggcggcg atcagcagcg catacaccgg caaccgcgcc
     2161 gagcaggtca tcagcggcgc gacgaggatg gtggcgaggc ggtcgcgcgg gtcggtgatg
     2221 gagcgcgtgc ccatgatgcc ggggatggcg caggcgaagc tggaaagcag cgggatgaag
     2281 gagcgcccgg tgagccccac cgacaccatc agccgatcca gcaggaaggc cgcgcgcggc
     2341 aggtagccgg attcctccag cgtgaggatg aagaagaaca gcaccaggat ttcgggcagg
     2401 aagcccagca ccgtgcccag gccgccgaaa atgccctcgc tcaccagacc ctgcagcggc
     2461 ccggccggca gccacgcggc gacgtgcccg cccagccagc cgaagccgtc gccgatcagg
     2521 tcggtcagcg gcttgcccaa cgagtacacc gcctggaaca ccaggaacat caccagcgcg
     2581 aggatggc
//
LOCUS       DASSVL010000326         2178 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_657619, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000326 DASSVL010000000
VERSION     DASSVL010000326.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2178)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2178)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2178
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_657619"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(236..1636)
                     /locus_tag="VFM52_05745"
     CDS             complement(236..1636)
                     /locus_tag="VFM52_05745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019465770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HET8764703.1"
                     /translation="MTNDQTVAGVIDDAQLLADEAKYSSFGDTVHYVDPPKIFRHGEG
                     SYMFDTAGTPFLDLQMWYSAVNFGYGNKRLNDALKRQIDVLPQVASQYLHQTRIELAK
                     TIALDAKQKFGLDGRVHFNVGGAQAIEDSLKLVRNYTKGKSLMFAFEGGYHGRTLGAS
                     SITSSYRYRRRFGHFGERAMFLPFPYPFRRPKGMSAEEYSDSCVHQFARLFETEYNGV
                     WDPKTNQCEYAAFYVEPIQGTGGYVVPPKNFFRDLKKVLDQYGILLVVDEIQMGFWRT
                     GKLWSIENFGVTPDVLVFGKALTNGLNPLSGLWAREEMINPTIFPPGSTHSTFNSNPL
                     GTALGLEVLQYGKEMNYEKTVPEKGAHFLEGLRSLQKKHKEIGDVDGLGLALRAEICT
                     GDGFTPNKALLDKMVDIGLAGGLTHKGKPIGLVLDVGGWYKNVITLAPSLNITTEEID
                     LAIELLDQLLTKAKKG"
     gene            complement(1687..2178)
                     /locus_tag="VFM52_05750"
     CDS             complement(1687..2178)
                     /locus_tag="VFM52_05750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008435426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase"
                     /protein_id="HET8764704.1"
                     /translation="MRELWIDHAFPGFVAKARELGVPIRVVSDGLDYAINRILGRYGL
                     GDLPIAANHLMPALQPKHWQLTSPYRAAGCASGTCKCACVDEARRDGAKTLLIGDGAS
                     DFCAADRVDFVFAKHRLIEHCRAAGIPYMPITSFDDAIAYLPQLVDGTLVPELPAREA
                     VAA"
BASE COUNT          358 a          687 c          741 g          392 t
ORIGIN      
        1 ccgctcgctc atcgccgctg ccccggttcg catggataga cccgcgagcg gcgtcaagtc
       61 tgcaagcggg aaacgcggga ccttactgcg caagcgcgcc gggtgtgctg atccagatcg
      121 tggcgccagt ggccaagacg cgaatgccgc ggtgaaacgg gatgcacccg tcgtcaccac
      181 ggcattcgag gtcgggtcgc ggcgcgcagc cgcaacgtct cggctggggc cagcctcagc
      241 ccttcttcgc cttcgtcagc aactggtcga gcagctcgat cgcgagatcg atttcctcgg
      301 tcgtgatgtt gagcgagggc gccagcgtga tcacgttctt gtaccagccg cccacgtcga
      361 gcacgaggcc gatcggcttg cccttgtggg tgaggccacc ggcgaggccg atgtccacca
      421 tcttgtcgag caacgccttg ttcggcgtga agccgtcccc ggtgcagatc tcggcgcgca
      481 gcgcgaggcc caggccgtcg acgtcgccga tttccttgtg cttcttctgc aggctgcgca
      541 ggccttcgag gaagtgcgcg cccttctccg gcacggtctt ctcgtagttc atctccttgc
      601 cgtactgcag cacctccagg ccgagcgcgg tgccgagcgg gttggagttg aacgtggagt
      661 gtgtggagcc cggcgggaag atggtcgggt tgatcatctc ctcgcgcgcc cacaggccgg
      721 aaagcggatt caggccgttg gtcagcgcct tgccgaacac cagcacgtcc ggcgtcacgc
      781 cgaagttctc gatcgaccac agcttgccgg tgcgccagaa acccatctgg atttcatcga
      841 cgacgagcag gatgccgtac tggtccagca ccttcttcag atcgcggaag aaattcttcg
      901 gcggcaccac gtagccgccg gtgccctgga tcggctcgac gtagaacgcg gcgtattcgc
      961 actggttggt cttggggtcc cacacgccgt tgtattcggt ctcgaacagg cgcgcgaact
     1021 ggtgcacgca gctgtcggaa tactcttccg cgctcatgcc cttcgggcgg cggaacggat
     1081 acgggaacgg caggaacatc gcgcgctcgc cgaagtggcc gaagcggcga cggtagcggt
     1141 agctcgacgt gatcgacgag gcgccgagcg tgcggccgtg gtagccgccc tcgaacgcga
     1201 acatcaggct cttgcccttg gtgtagttgc gcaccagctt gagcgaatcc tcgatcgcct
     1261 gcgcgccacc cacgttgaag tgcacgcggc cgtccaggcc gaacttctgc ttcgcgtcca
     1321 gcgcgatggt cttggccagc tcgatgcggg tctggtgcag gtactggctc gccacctgcg
     1381 gcagcacgtc gatctggcgc ttcagcgcgt cattgaggcg cttgttgccg tagccgaagt
     1441 tgaccgccga gtaccacatc tgcaggtcta ggaacggcgt gccggcggtg tcgaacatgt
     1501 agctgccttc gccgtggcga aagatcttcg gcgggtcgac gtaatggacg gtgtcgccga
     1561 acgagctgta cttggcttcg tccgcaagca actgggcgtc gtcgatgacg cccgcgacgg
     1621 tctggtcgtt ggtcatggct tgattccgtg aaacggggaa agggggtctg ggtaccggca
     1681 cgccggtcag gcggcaaccg cttcgcgtgc gggcagttcg ggcaccagcg tgccgtcgac
     1741 gagctgcggc aggtaggcga tggcgtcgtc gaaactggtg atcggcatgt acggaatgcc
     1801 ggcggcgcgg cagtgctcga tcaagcggtg cttggcgaac acgaaatcga cgcggtcggc
     1861 ggcgcagaaa tccgaggcgc cgtcaccgat caacagcgtc ttcgcaccat cgcggcgcgc
     1921 ttcgtccacg caggcgcact tgcaggtgcc actggcgcaa ccggcggcgc ggtagggcga
     1981 ggtgagctgc caatgcttgg gctgcagcgc cggcatcagg tggttggcgg caatcggcag
     2041 gtcgccgagg ccgtagcggc cgaggatccg gttgatggcg taatccagcc cgtcactgac
     2101 cacgcggatc ggcacgccca actcgcgcgc cttggcgacg aaacccggaa acgcgtggtc
     2161 gatccacagc tcgcgcag
//
LOCUS       DASSVL010000327         4442 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_106281, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000327 DASSVL010000000
VERSION     DASSVL010000327.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 4442)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4442)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4442
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_106281"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(31..726)
                     /locus_tag="VFM52_05755"
     CDS             complement(31..726)
                     /locus_tag="VFM52_05755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007809114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070567 - cytidylyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 4-phosphate
                     cytidylyltransferase"
                     /protein_id="HET8764705.1"
                     /translation="MSVDTVWCVVPTAGQVVPLGSDCPPTRLPLGGSTVLEQTLGRLA
                     AHPRVAGLMMALDRNDAHGLAVDQLHGKPVLTADGGFSRCDAVLAGLRALPEAVGERD
                     FVLVHDPLRPCVRGADIERLIVQAAPAGGGLLGVPVREMLKRANDQRCSEATEQVDRR
                     WRALSPQMFRRGELTRVMQAVANRGWTVSDEAMAMEIAGFRPLLVEGAPDNLRVVTPD
                     DLAYAGFLLARDA"
     gene            complement(723..1061)
                     /gene="ftsB"
                     /locus_tag="VFM52_05760"
     CDS             complement(723..1061)
                     /gene="ftsB"
                     /locus_tag="VFM52_05760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007082767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsB"
                     /protein_id="HET8764706.1"
                     /translation="MLRWVALILIALLIGLQMKLWSAHGGMHEVDAMRVSIKKQVDEN
                     ARLQQRNQALAADVADLKHGDQAIEARARTGLGLIKPGETFYQIDNQPAGASTTLPLP
                     PPARPGAQAQ"
     gene            complement(1074..2387)
                     /gene="eno"
                     /locus_tag="VFM52_05765"
     CDS             complement(1074..2387)
                     /gene="eno"
                     /locus_tag="VFM52_05765"
                     /EC_number="4.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017461177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004634 - phosphopyruvate hydratase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopyruvate hydratase"
                     /protein_id="HET8764707.1"
                     /translation="MTTQITRIHAREILDSRGNPTLEAEITLADGSFGRAAVPSGAST
                     GTREAVELRDGDPKRYGGKGVRNAVEHINGAIASALKGFDASNQGGLDAKLIQLDGTP
                     NKGKLGANALLGVSMAAAHAVAAQRKQPLWQYLAGINGTTGKPGALPTPMMNVINGGV
                     HADNPLDMQEFMIVPAGFERFSEALRAGAEVFHALKARLKKHGFNTAVGDEGGFAPAL
                     RTHEEAIEIILEAVNAAGYTPGKQFWIALDPASSEFFADGVYDLKAENRKLDAAGMVE
                     LYAGWCAKYPIVSIEDGLAEGDQAGWKLITARLGKAIQLVGDDLFVTNPTIFKQGIDN
                     HIANAILIKVNQIGTLSETLEAIAMAHAAKYAAIVSHRSGETEDTTIADIAVATTATQ
                     IKTGSLSRTDRIAKYNQLLRIEEALGAGAHFAGRKAFVSLDRLPG"
     gene            complement(2511..3344)
                     /gene="kdsA"
                     /locus_tag="VFM52_05770"
     CDS             complement(2511..3344)
                     /gene="kdsA"
                     /locus_tag="VFM52_05770"
                     /EC_number="2.5.1.55"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016904019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008676 - 3-deoxy-8-phosphooctulonate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-8-phosphooctulonate synthase"
                     /protein_id="HET8764708.1"
                     /translation="MNLCGFDVGLDKPFFLIAGPCVIESEQLQVDTAGTLKEITARLG
                     IPFIFKSSFDKANRSSGTSFRGLGMAEGLRILGEVKRQVGVPVLTDVHEYTPFDEVPA
                     VVDVLQTPAFLCRQTDFIQKVARAGKPVNIKKGQFLAPWDMKHVVAKAKAAGNDQILV
                     CERGASFGYNNLVSDMRSLSAMRDTGCPVVFDATHSVQLPGGQGTSSGGQREFIPVLA
                     RAAVAAGVAGLFAETHPNPAKALSDGPNAWPLGKMEALLETLMELDAVTKRHRFLEQD
                     V"
     gene            complement(3397..>4442)
                     /locus_tag="VFM52_05775"
     CDS             complement(3397..>4442)
                     /locus_tag="VFM52_05775"
                     /EC_number="6.3.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005408998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003883 - CTP synthase activity [Evidence
                     IEA];
                     GO_process: GO:0006221 - pyrimidine nucleotide
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0006241 - CTP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="CTP synthase"
                     /protein_id="HET8764709.1"
                     /translation="LCRSEQPLPDSERRKIALFTNVSERAVISAVDLDNIYKMPRFFH
                     EQGLDDIVIRRLGLQAGPANLSEWDAVLDASEHPVDEVTIGVVGKYVDHQDAYKSVAE
                     ALKHGGLRQRTRVKLKWLESSDVEKLGSAALEGVDGILVPGGFGDRGFEGKVLTAKYA
                     REHGIPYFGICYGMQAAVVDYARNVCGLDGANSTENDKHSPHPVIGLITEWRTSTGDV
                     ERRSEESDLGGTMRLGLQEQRLKPGTLARETYGRDVVSERPRHRYEFNNRYRTQLEDA
                     GLVISGKSMDDLLVEMVELPRDVHPWFLACQAHPEFLSTPRDGHPLFIGFIHAAREHK
                     AHAHDAAPTAVRA"
BASE COUNT          672 a         1504 c         1495 g          771 t
ORIGIN      
        1 cgctcatggt cgtcccttgc ccgaggcagg ctacgcgtcc ctggccagca ggaacccggc
       61 gtaggcgagg tcgtccggcg tgaccacgcg gaggttgtcc ggcgcaccct cgaccagcag
      121 cgggcggaag ccagcaatct ccatcgccat cgcctcgtcg ctcaccgtcc agccgcgatt
      181 ggcgacggcc tgcatcaccc gcgtcagctc accgcggcgg aacatctgcg ggctgagtgc
      241 acgccagcgg cggtcgacct gctcggtggc ctcactgcac cgctgatcgt tcgcacgctt
      301 gagcatctcg cgcaccggca cacccagcag gccgccgcca gccggcgccg cctgcacgat
      361 cagccgctcg atatcggcgc cacgcacgca cgggcgcagc gggtcgtgca ccagcacgaa
      421 atcgcgctca ccgaccgctt ccggcaaggc acgcagccca gccagcacgg catcgcagcg
      481 cgagaagccg ccgtcggcgg tcagcaccgg cttgccgtgc agctgatcca ccgccagccc
      541 gtgcgcatcg ttgcgatcca gcgccatcat caagccggca acgcgtggat gcgccgcgag
      601 gcgcccgagc gtctgctcga gcaccgtgct gccgccaagc ggcaggcggg tcggcggaca
      661 gtcgctgccc agcggtacca cttgccccgc ggtcggcacc acgcaccaca cggtatccac
      721 actcactgcg cttgagcccc tggacgtgcc ggcggcggca gcggcaaggt cgtgctggca
      781 ccggcgggtt ggttgtcgat ctggtagaag gtttcgccgg gcttgatgag gccgagcccg
      841 gtgcgtgcgc gcgcctcgat cgcctggtcg ccatgcttga ggtcggcgac gtcggcggcg
      901 agcgcctggt tgcgctgctg caggcgggcg ttctcgtcga cctgcttctt gatcgacacc
      961 cgcatcgcgt cgacctcgtg catgccgcca tgcgcggacc acagcttcat ctgcagtccg
     1021 atcaagaggg caatcaggat cagcgcgacc cagcgcagca tggagggtag cgatcagccg
     1081 ggcaggcggt cgaggctgac gaacgccttg cgcccggcaa aatgcgctcc ggcgcccagt
     1141 gcttcctcga tgcgcagcag ctggttgtac ttggcgatgc ggtcggtgcg gctgagcgag
     1201 ccggtcttga tctgcgtcgc cgtggtggcc accgcgatgt cggcgatcgt ggtgtcctcg
     1261 gtttcgccgg agcgatgcga cacgatcgcc gcgtatttcg ccgcgtgcgc catcgcgatc
     1321 gcttcgagcg tttccgacag cgtgccgatc tggttcacct tgatcaggat ggcattggca
     1381 atgtggttgt cgatgccctg cttgaagatc gtcgggttgg tgacgaacaa atcgtcgccg
     1441 accagctgga tcgccttgcc cagccgtgcg gtgatcagtt tccagccggc ctggtcgcct
     1501 tcggccaaac catcctcaat gctgacgatc gggtacttcg cgcaccagcc ggcatacagc
     1561 tcgaccatgc cggcggcgtc gagcttgcgg ttttcggcct tgaggtcgta cacgccatcg
     1621 gcaaagaact cggacgaggc cggatcaagc gcgatccaga actgcttgcc cggcgtgtag
     1681 cccgccgcat tgacggcttc caggatgatc tcgatggctt cctcgtgggt gcgcagcgcc
     1741 ggcgcgaaac caccttcgtc gcccaccgcg gtgttgaagc cgtgcttctt caggcgcgcc
     1801 ttgagcgcgt ggaagacttc ggcaccggcg cgcagggctt cggagaaccg ctcgaagccg
     1861 gccgggacga tcatgaactc ctgcatgtcc agcgggttgt cggcatgcac gccgccgttg
     1921 atgacgttca tcatcggcgt cggcagcgcg cccggcttgc cggtggtgcc gttgatgccg
     1981 gcgaggtact gccacaacgg ctgcttgcgc tgcgcggcca ccgcgtgcgc cgccgccatc
     2041 gacacgccga gcagcgcgtt ggcaccgagc ttgcccttgt tcggcgtgcc gtcgagctgg
     2101 atcagcttcg cgtccagccc gccctggttg ctggcgtcaa agcccttgag cgcgctggcg
     2161 atggcgccgt tgatgtgctc gaccgcgttg cgcacgccct tgccgccata gcgcttcgga
     2221 tcgccatcgc gcagttccac cgcctcgcgg gtaccggtgg aagcaccgct gggcaccgcc
     2281 gcgcggccga agctgccatc ggccagcgtg atttccgcct ccagcgtggg gttgccgcgc
     2341 gagtcgagga tttcacgggc atggatgcgg gtgatctgag tcgtcatggt tgccgtcgtc
     2401 cgtagtagat gaatgatccg ggtaggagcc cactcgcggg cgatgctctg gcttcggtgt
     2461 gcatcagagc aggagcgtcg cccgcgagcg ggctcctacc aaatcggggg ttacacgtct
     2521 tgctcgagga agcgatgacg cttggtcacg gcgtcgagct ccatcagggt ttccagcagc
     2581 gcttccatct tgcccagcgg ccaggcgttc gggccgtcgg aaagcgcctt ggccggattc
     2641 ggatgcgtct cggcgaacag cccggcgaca ccggccgcca ccgcggcgcg cgccagcacc
     2701 ggaatgaact cgcgctgacc accggaactg gtgccctgcc cgcccggcaa ttgcaccgag
     2761 tgggtggcgt cgaacaccac cggacagcca gtgtcgcgca ttgcggagag cgaacgcatg
     2821 tcggaaacca ggttgttgta gccaaagctc gcgccgcgct cgcacaccag gatctggtcg
     2881 ttgccggcgg ccttcgcctt cgcgaccacg tgcttcatgt cccacggcgc gaggaactgg
     2941 cccttcttga tgttcaccgg cttgccggca cgcgccacct tctggatgaa atccgtctgc
     3001 cggcacagga acgccggcgt ctgcagcacg tcgaccaccg cgggcacctc gtcgaacggg
     3061 gtgtactcgt gcacgtcggt gagcaccggc acgccgacct ggcgcttgac ctcgccgagg
     3121 atgcgcaggc cttccgccat gcccagcccg cggaagctgg tgccggagga gcggttggcc
     3181 ttgtcgaagc tcgacttgaa gatgaaggga atgccgagcc gcgccgtgat ctccttgagc
     3241 gtgccggcgg tatccacctg cagctgctcg gactcgatca cgcacgggcc ggcgatcagg
     3301 aagaacggct tgtcgaggcc gacgtcgaat ccacagaggt tcatcggatg ctccagcgcg
     3361 atgtcgcgtg cgcggcgggg aatagggaag cgtgcatcag gcgcgcaccg ccgtcggcgc
     3421 ggcgtcgtgc gcgtgcgcct tgtgttcgcg cgcggcatgg atgaagccga tgaacagcgg
     3481 atgcccgtcg cgcggcgtcg acaggaattc cgggtgtgcc tggcaggcga ggaaccacgg
     3541 atgcacatca cgcggcagtt cgaccatctc gaccagcaga tcgtccatcg acttgccgga
     3601 gatcaccagc cccgcgtcct cgagctgcgt gcggtagcgg ttattgaatt cgtagcgatg
     3661 gcgagggcgc tcgctgacga cgtcgcggcc gtaggtttcg cgcgccagcg tgccgggctt
     3721 caggcgctgc tcctgcaggc ccagtcgcat ggtgccgccg aggtcgctct cctcgctgcg
     3781 gcgctccacg tcgccggtgg acgtgcgcca ttcggtgatg aggccgatga ccggatgcgg
     3841 cgagtgcttg tcgttctcgg tgctgttggc gccgtcgagg ccgcagacat tgcgtgcgta
     3901 gtccaccacc gcggcctgca tgccgtagca gatgccgaaa tacgggatgc cgtgctcgcg
     3961 cgcgtacttc gcggtcagca ccttgccctc gaagccgcga tcgccgaagc cgcccggcac
     4021 gaggatgccg tcgacgccct cgagcgccgc gctgcccagc ttctcgacgt cgctggattc
     4081 cagccacttg agcttgacgc gcgtgcgctg gcgcaggccg ccgtgcttca gcgcttccgc
     4141 cacggattta taggcgtcct ggtggtcgac gtatttgccg accacgccga tcgtgacctc
     4201 gtcgacggga tgttcgctgg cgtccagcac cgcatcccat tccgacaggt tcgccgggcc
     4261 cgcctgcagg ccgaggcgac ggatcacgat gtcgtcgagc ccctgctcgt ggaagaagcg
     4321 cggcatcttg tagatgttgt cgaggtcgac ggcggagatc accgcgcgct cggacacgtt
     4381 ggtgaacagc gcgatcttgc ggcgctccga atccggcagc ggttgctcgc tgcggcagag
     4441 ca
//
LOCUS       DASSVL010000328         6769 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1066871,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000328 DASSVL010000000
VERSION     DASSVL010000328.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 6769)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6769)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6769
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1066871"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..246
                     /locus_tag="VFM52_05780"
     CDS             <1..246
                     /locus_tag="VFM52_05780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017463555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8764710.1"
                     /translation="GIDGRFPDVVWDGYFDPRSVGKDGLPPAADRICVPDPKVGVLNL
                     DGPHGYKKPSTDDAAYRCKLDPLPPVKLALAAMEKRP"
     gene            243..1436
                     /locus_tag="VFM52_05785"
     CDS             243..1436
                     /locus_tag="VFM52_05785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008213378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SO2930 family diheme c-type cytochrome"
                     /protein_id="HET8764711.1"
                     /translation="MNLRRSLWLLATTALLAACAKPQPAVTFHEHTNPQDLVAWHVVE
                     PRDGYLVLNQGVEPYAVNTKLFADYAHKLRTLWMPKGAAARYQPREVLDFPVGTIISK
                     TFYYPLPEGQPRNAKDVALSYAGIEDYLPAKGLELAKIHLVETRLLVHRKTGWSAITY
                     TWNADQTRATLAPLGAMDDLELVDAQGARTPFTYVVPSEDQCQVCHNVEYGATGANAT
                     RHILPIGPTARQLNRDFPYASGPENQLTRWARMGWLGGLPALAAVPRNADWLDPKASL
                     DARARSYLDANCAYCHNPHGEANYTALWLTADEPFGIATGQCKTPVAAGPATGGRLFD
                     VVPGQPDASILVHRMASTRVGVMMPELGRTLADEKAVALIRDWVALLKAAPCTIVHGE
                     APAAP"
     gene            1462..3918
                     /locus_tag="VFM52_05790"
     CDS             1462..3918
                     /locus_tag="VFM52_05790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017463557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HET8764712.1"
                     /translation="MRLIRRELASSMTQALVLGGVLGLALPALADDAPATGQATPQQP
                     ETKKEATNLSQVTVTAQSRKQELEAVPIAIDVVNGAEIATHAATDISKIDMFIPGLSV
                     DASQPTQPSYEIRGIGGSGFGVGTDPAVGVYMDGVYAARSGASVLAFNDVQRIEVLKG
                     PQGTLFGRNAAAGAISIISNRPDPSRFGASGLVRIGNYGEVYAAGMLNLPVSPNAAFR
                     FSLVDNQSDGWLTDRATHRDYASNNDWGLRSSWLWNIGGDTTLWLTWNHERLNQPPRA
                     AIGLVALSSDVNQPAPFPADPATYLNPLHAPLYNDAVGGGEWRHYDDVTLHLDHYFKW
                     GQLSSISAWRGFRTYNSNDNDGTNHDAVHFDELNAEANRSFYQEFKLSGDNDVASWLA
                     GASWYKEIANQTSGVGLYTDSVDTMIQNLGVPTGTPDGTIYHYFTGMLQAAGLPFSLL
                     HDYWQEQIRNRGDYQSYAVYGDVIWHLTDTVNLTTGARLTRDEKEFSWFNLPRIAPAL
                     DQTIATLDALGVLAQAGVPAAVFQQNLVFTDAVGELVHAKNSWNDFSPRVVLDDHFTP
                     NIMGYVSVAKGYKAGGYNSVQVASHFAPEKVWNYEAGIKAVFPAANLVVNGSVYHYRY
                     SNLQDLTLIPNATGSGVPGYVVSSSDEKADGADLALQWQPLADLSFHANAAYINSRYG
                     HKIGALGEDLSGDPTGVPKVSYTVGVQYGWNAGGGRMTANLSHAFRGAARCNADMQFN
                     GACAVSPNFTVGGPQNRTDARLDWTAPGGHWGVALYANNLFDQRYVMQVNNVSASVLG
                     TPNAFINAPRLYGVEFHAKL"
     gene            3941..5356
                     /locus_tag="VFM52_05795"
     CDS             3941..5356
                     /locus_tag="VFM52_05795"
                     /EC_number="1.2.1.68"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018972526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050269 - coniferyl-aldehyde dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006081 - cellular aldehyde metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="coniferyl aldehyde dehydrogenase"
                     /protein_id="HET8764713.1"
                     /translation="MDTPANPNPLHAAWQRLRLAQDAQPYPDWPERRRRLLALRAVVA
                     AHQDEICAAINADFGCRPAAEVKLLEAFPSLDGIAYALRKARKWMRPKKQWAGFWFLP
                     ARTELLPQPVGVVGVIVPWNYPLYLAVGPITDALAAGNRVMVKMSEYTPTFSALFAQL
                     VAKHFPSGEVVVVNGDANVAAAFSSLPFDHLLFTGSTSVGRHVMRAAAENLTPVTLEL
                     GGKSPAIIGPNARFDAAVERIVYGKSVNAGQTCIAPDYVLLPRSRVGEFITKATAAFA
                     RLYPDYARHGDYASVINERRYTHLVSLRDAAVAAGAQAHPLGAADGDATARRMPPTLL
                     TNVTPDAQVMNEEVFGPLLPLVGYDKLDDALAYVAAHPHPLSLYLFDDDARTQRRVLE
                     QNLAGGVTLNDTLYHIAQHHLPFGGIGDSGMGAYHGEAGFRTFSKLKPVFRQARWNGV
                     GLLNPPYGARFQRMLKLLLRH"
     gene            5453..5827
                     /locus_tag="VFM52_05800"
     CDS             5453..5827
                     /locus_tag="VFM52_05800"
                     /inference="COORDINATES: protein motif:HMM:NF024834.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HET8764714.1"
                     /translation="MDSLIVGWLRAAGLLIAAGTLAACGDATPPPAAPAPQAVLSPEL
                     ATTYQHTCANCHTNPQTGAPQAGDAKAWAPRLAQGQDVLLDHAINGYKGMPPLGTCMD
                     CTREQFQALIDYMAGVPQAGKH"
     gene            5827..>6769
                     /locus_tag="VFM52_05805"
     CDS             5827..>6769
                     /locus_tag="VFM52_05805"
                     /inference="COORDINATES: protein motif:HMM:NF013714.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HET8764715.1"
                     /translation="MDASRRRLLKGMGALGLLGLAGPLAAETALLLPGSTKPRWPQPI
                     AWRNWSGAQTCLPAARLGPANEAELAELLRAAKGTVRPVGSGHSFSALVPTDDTIVSL
                     ARMSGMIGHDTRALTSEWWAGTPMSQMGAPLAAAGLALPNMADIDYQTLAGALATSTH
                     GSGVDYGSYSTQVAGLRLVTAAGDTVDCDAQHHPEIFAAARCGLGALGVVTRVKLANR
                     RAFKLRRKEWVQDWRELLEDMPRLLKEHQHFEMDVLLHSNVALAVATDETTDPRVIPK
                     APGGDVKNVALLKRVHDGWRDSPRAYARIIDFVAKHVI"
BASE COUNT         1115 a         2404 c         2285 g          965 t
ORIGIN      
        1 ggcatcgatg gccgcttccc cgacgtggtg tgggacggct atttcgaccc caggagcgtc
       61 ggcaaggacg gcctgccgcc ggcggcggac cgcatctgcg tgccggaccc gaaggttggc
      121 gtgctgaacc tggatggccc acacggctac aagaaaccga gcaccgacga cgcggcgtac
      181 cgctgcaaac tcgatccgtt gccgccggtg aaactcgcgc tggccgcgat ggagaagcgg
      241 ccgtgaacct gcgccgctcc ctgtggctgc tggcgacgac ggcgctgctc gccgcctgcg
      301 ccaagccgca gccggcggtg acgttccacg agcacaccaa cccccaggac ctcgtcgcgt
      361 ggcacgtggt cgaaccgcgc gacggctatc tggtgctgaa ccagggcgtc gagccttatg
      421 cggtcaacac caagctgttc gccgactatg cgcacaagct gcgcacgctg tggatgccca
      481 agggcgccgc cgcgcgctac cagccgcgcg aagtgctgga tttcccggtc ggcaccatca
      541 tcagcaagac gttctactac ccactgccgg aaggccagcc gcgcaacgcg aaggacgtcg
      601 cgctgagcta cgccggcatc gaggactacc tgccggcgaa gggactggag ctggcgaaga
      661 tccacctggt cgagacgcgc ctgctggtgc accgcaagac cggctggagc gcgatcacct
      721 acacctggaa cgccgaccag acccgcgcca cgctcgctcc gctcggcgcg atggacgacc
      781 tcgaactcgt cgatgcgcaa ggtgcgcgca cgccgttcac ctacgtggtg cccagcgagg
      841 accagtgcca ggtgtgccac aacgtcgagt acggcgcgac cggcgccaac gcgacgcggc
      901 acatcctgcc gatcggcccg accgcgcgcc agctgaaccg tgatttcccc tacgcctcgg
      961 gcccggaaaa ccagctcacg cgctgggcgc gcatgggttg gctcggcggg ctgccggcgc
     1021 tggccgcggt gccgcgcaat gcagactggt tggacccgaa ggcctcgctc gacgcgcgcg
     1081 cacgttccta cctcgacgcc aattgcgcgt actgccacaa cccgcacggc gaggccaact
     1141 acaccgcgct gtggctcact gccgacgagc cgttcggcat cgccaccggg cagtgcaaga
     1201 ccccggtcgc ggccgggccg gccaccggcg ggcggttgtt cgacgtggtg ccggggcagc
     1261 cggacgcgtc gatcctcgtg caccgcatgg cctcgacgcg ggtgggcgtg atgatgcccg
     1321 agctggggcg cacgctggcc gacgagaagg cggtggcgtt gatccgcgat tgggtggcat
     1381 tgctcaaggc ggcgccgtgc acgatcgtcc acggcgaagc gccggcggcg ccatgaatcg
     1441 actgacgaag gggaatccag catgcgactg atccgacgtg aactggcgag ctccatgacc
     1501 caggcgctgg tgctgggcgg ggtgctcggg ctggcgttgc cggcgctggc ggacgacgcg
     1561 ccggcgaccg ggcaggccac accgcagcag ccggagacga agaaggaggc caccaacctc
     1621 tcgcaggtga cggtgacggc gcagagccgc aagcaggagc tggaagcggt gccgatcgcg
     1681 atcgacgtgg tgaacggcgc cgagatcgcc acccacgccg cgaccgacat cagcaagatc
     1741 gacatgttca ttcccggcct gtcggtggat gcctcgcagc cgacccagcc gagctacgag
     1801 atccgcggca tcggcggcag cggcttcggc gtcggcaccg acccggcggt gggcgtgtac
     1861 atggacggcg tctacgcggc gcgctccggc gcctcggtgt tggcgttcaa cgacgtgcag
     1921 cgcatcgagg tgctgaaagg cccgcagggc acgctgttcg ggcgcaacgc ggccgccggc
     1981 gcgatctcga tcatcagcaa ccggcccgat ccctcgcggt tcggcgccag cggcctggtg
     2041 cgcatcggca actacggcga ggtgtacgcc gccggcatgc tgaacctgcc ggtcagcccg
     2101 aacgcggcgt tccgcttcag cctggtcgac aaccagagcg acggctggct gaccgaccgc
     2161 gcgacacacc gcgactacgc cagcaacaac gactggggcc tgcgctcctc gtggctgtgg
     2221 aacatcggcg gggacaccac gctgtggctc acctggaacc acgagcggct gaaccagccg
     2281 ccgcgcgcgg cgatcggcct ggtggcgctc tccagcgacg tgaaccagcc ggccccgttc
     2341 ccggccgacc cggccaccta tctcaacccg ctgcacgcgc cgctgtacaa cgacgccgtg
     2401 ggcggcggcg agtggcgcca ctacgacgac gtgacgctgc acctggacca ctatttcaag
     2461 tggggccagc tctcctcgat cagcgcctgg cgcggtttcc gcacctacaa cagcaacgac
     2521 aacgacggca ccaaccacga cgcggtgcac ttcgacgagt tgaatgccga ggccaaccgc
     2581 agcttctacc aggagttcaa gctctccggc gacaacgacg tggcgagctg gctggccggc
     2641 gcgagctggt acaaggaaat cgccaaccag acctcgggcg tcggcctcta taccgacagc
     2701 gtggacacaa tgatccagaa cctcggcgtg cccaccggca cgccggacgg caccatctac
     2761 cactacttca ccggcatgct gcaggccgcc gggctacctt tcagcctgtt gcacgattac
     2821 tggcaggagc agatcaggaa ccgcggcgac taccagtcct atgcggtgta cggcgacgtg
     2881 atctggcacc tcaccgacac cgtgaacctc accaccggcg cgcgcctcac gcgcgacgag
     2941 aaggagttca gctggttcaa cctgccgcgc atcgcgccgg cgctggacca gaccatcgcc
     3001 acgctggatg cgctcggcgt gctggcgcag gccggcgtgc cggcggcggt gttccagcag
     3061 aacctggtgt tcaccgatgc cgtcggcgag ctggtgcacg cgaagaacag ctggaacgat
     3121 ttcagcccgc gcgtggtgct ggacgaccac ttcaccccga acatcatggg ctatgtgtcg
     3181 gtggccaagg gctacaaggc cggcggctac aacagcgtgc aggtggcctc gcacttcgcc
     3241 ccggaaaagg tgtggaacta cgaggcgggc atcaaggcgg tgtttccggc ggccaacctc
     3301 gtggtcaacg gctcggtcta tcactaccgc tattccaacc tgcaggacct gaccctgatc
     3361 cccaacgcca ccggctcggg cgtgcccggc tacgtggtga gctccagcga cgagaaggcg
     3421 gacggcgccg accttgcgct gcaatggcag ccgcttgcgg atttgtcctt ccacgccaat
     3481 gccgcgtaca tcaactcgcg ctacggccac aagatcggcg cgctgggcga ggacctttcc
     3541 ggcgacccca ccggcgtgcc caaggtgtcc tacaccgtgg gcgtgcagta cggctggaac
     3601 gcgggcggcg gccggatgac ggcgaacctg agccacgcgt tccgcggcgc ggcgcgctgc
     3661 aacgctgaca tgcagttcaa cggcgcctgc gcggtgagcc cgaacttcac cgtgggcggg
     3721 ccgcagaacc gcaccgacgc gcggctcgac tggaccgcgc cgggcggcca ctggggcgtg
     3781 gcgctgtacg ccaacaacct gttcgaccag cgctacgtga tgcaggtgaa caacgtctcg
     3841 gccagcgtgc tgggcacgcc gaacgccttc atcaacgcgc cgcggctgta cggcgtcgaa
     3901 ttccacgcca aactgtaggc cccaccgacc acacatcgcc atggacacgc ccgccaaccc
     3961 caatccgctg cacgccgcct ggcaacgcct gcgcctggcg caggatgcgc agccttatcc
     4021 cgactggccg gagcgccggc gccggctgct cgcgttgcgc gcggtggtgg ctgcgcacca
     4081 ggacgaaatc tgcgctgcga tcaacgccga tttcggctgc cgcccggcgg cggaggtgaa
     4141 gctgctcgaa gccttcccct cgctcgacgg catcgcctac gcgctgcgca aggcaagaaa
     4201 gtggatgcgg ccgaaaaagc agtgggccgg gttctggttc ctgccggcgc gcaccgagct
     4261 gttgccgcag ccggtcggcg tggtcggcgt gatcgtgccg tggaattacc cgctgtacct
     4321 cgccgtgggc ccgatcaccg acgcgctcgc cgccggcaac cgggtgatgg tgaagatgag
     4381 cgagtacacg ccgacgttct cggcgttgtt cgcgcagctc gtcgccaagc attttccgag
     4441 cggtgaagtc gtggtggtga atggcgatgc caacgtcgcg gccgcgtttt cgagcctgcc
     4501 gttcgaccat ctgctgttca ccggctcgac ctcggtcggc cgccacgtga tgcgggcggc
     4561 ggcggaaaac ctgacgccgg tgacgctgga gctgggcggc aagtcgccgg cgatcatcgg
     4621 cccgaatgcg cgcttcgacg cggcggtgga gcgcatcgtc tacggcaaga gcgtcaacgc
     4681 cgggcagacc tgcatcgcgc cggactacgt gctgctgccg cgcagccgcg tgggcgagtt
     4741 catcaccaag gccacggccg cgtttgcgcg cctgtacccc gactacgcgc gccacggcga
     4801 ttacgccagc gtcatcaacg agcggcgcta cacgcacctg gtttcgttgc gtgatgccgc
     4861 ggtggccgcc ggcgcgcagg cgcatccgct cggtgcggcg gacggcgacg ccaccgcgcg
     4921 gcgcatgccg ccgacgctgc tgaccaacgt cacgccggac gcgcaggtga tgaacgagga
     4981 agtgttcggc ccgctgctgc cgctcgtcgg ctacgacaag ctggacgacg cgctggcgta
     5041 cgtcgccgcg cacccgcatc cgctgtcgct gtacctgttc gacgacgacg cgcgcaccca
     5101 gcgccgcgtg ctggagcaaa acctcgccgg cggcgtcacg ttgaacgaca cgctctacca
     5161 catcgcccag caccacctgc cgttcggcgg catcggcgat tcgggcatgg gcgcgtatca
     5221 cggcgaagca ggtttccgca cgttctcgaa gctgaagccg gtgtttcgcc aggcgcgctg
     5281 gaatggcgtc gggctcttga atccacccta tggcgcgcgt ttccagcgca tgttgaaact
     5341 gcttttgcgg cactgatcgc gtcacccacg cggccgctgc gccgcccacg tcacaccacg
     5401 aacgcggggt ttgcgccctg cgcagggttg gttttgcccg aaggaggctt cgatggacag
     5461 cttgatcgtc ggatggctgc gtgcagccgg cctgctgatc gccgccggca cgctcgccgc
     5521 atgtggcgat gccacgccgc cgcccgcggc gcccgcgccg caggccgtgc tctcgcccga
     5581 gctggcgacg acctaccagc acacctgcgc caactgccac accaacccgc agaccggcgc
     5641 gccgcaggcg ggcgacgcga aggcgtgggc gccgcgcctg gcccagggcc aggacgtgct
     5701 gctcgaccat gcgatcaacg gctacaaggg catgccgccg ctcggcacct gcatggactg
     5761 cacgcgcgag cagttccagg cgctgatcga ctacatggcc ggcgtgccgc aagcggggaa
     5821 gcactgatgg acgcctcgcg ccgacggctc ctgaaaggca tgggcgcgct cggcctgctg
     5881 ggcctggccg ggccgctcgc ggccgaaacc gcactgctcc tgcccggctc caccaagccg
     5941 cgctggccgc agccgatcgc gtggcgcaac tggtcgggcg cgcaaacctg cctgccggcg
     6001 gcgcgccttg gccccgccaa cgaggcggag ctggccgagc tgctgcgcgc ggcgaagggc
     6061 acggtgcggc cggtcggctc cggtcactcg ttcagcgcgc tggtgccgac cgacgacacc
     6121 atcgtctcgc tggcgcggat gagcggcatg atcggccacg atacccgggc gctcacctcc
     6181 gaatggtggg ccggcacgcc gatgtcgcag atgggcgcgc cgctcgccgc cgccgggctg
     6241 gcgctgccga acatggccga catcgactac cagacgctgg ccggcgcgct cgccacgtcc
     6301 acccacggct cgggcgtcga ctacggctcg tactcgaccc aggtggccgg cctgcgcctg
     6361 gtcaccgccg ccggcgacac cgtcgactgc gatgcgcagc accacccgga aatcttcgcc
     6421 gccgcgcgct gcgggctcgg tgcgctcggc gtggtcaccc gggtgaagct ggccaatcgc
     6481 cgcgcgttca agctcaggcg caaggagtgg gtgcaggact ggcgggaact gctggaggac
     6541 atgccgcgcc tcttgaagga acaccagcat ttcgagatgg acgtgctgct gcattccaac
     6601 gtggcgctgg ccgtcgccac cgacgaaacc accgacccgc gggtgattcc caaggcgccc
     6661 ggcggcgacg tgaagaacgt cgcgctgctc aagcgcgtgc acgacggctg gcgcgattcg
     6721 ccgcgcgcct acgcgcgcat catcgacttc gtcgccaagc acgtgatct
//
LOCUS       DASSVL010000329         2183 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_163230, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000329 DASSVL010000000
VERSION     DASSVL010000329.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2183)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2183)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2183
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_163230"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1409
                     /locus_tag="VFM52_05810"
     CDS             <1..1409
                     /locus_tag="VFM52_05810"
                     /inference="COORDINATES: protein motif:HMM:TIGR02243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="putative baseplate assembly protein"
                     /protein_id="HET8764716.1"
                     /translation="IKLSSSKDFTNYTLRKTAVLAQSEQLELAELPITDVVKGNRLVL
                     DKPYLGLTVGRPVVVTGVRTDLDGVTDSEVMTLAEVTFNKGYTELVFVGSLANEYERA
                     SVTVNANVALATHGETKDQALGSGDANKPFQKFRLPEAPLTYVAAENTTGAASTLQVR
                     INQLLWQEVDFLYGRGPDEHVYITRTDDEGRTYVQFGDGRTGARVPTGQENVRATYRK
                     GMGAEGLVDEAQLTLLLVKPLGVRSVTNPLAAGDAADAESRDDVRRNAALPIRTLDRI
                     VSLRDYEDFARAFSGVAKALATWTWNGRQRGVFVTVAGAGGKAIAEGSLTYKNLLSAM
                     LQAGDPTVPLRVKSYTPAFFRLAGNLSIDPVYQTDQVLAAVEAALRAAFSFDAREFGQ
                     PVAKSEVIATIQAVKGVLAVDLNALHRTDATTEQLAHTTLFDRLTAQVPRAGTDVTVA
                     AELLLLDPRPVQLGVMKA"
     gene            1406..>2183
                     /locus_tag="VFM52_05815"
     CDS             1406..>2183
                     /locus_tag="VFM52_05815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8764717.1"
                     /translation="MSLDIETIYGLLPAVYRTRDAAVAEASDDLLTPEEQADLQALRD
                     ALAAGGLDETQQRDLARLEEKRLRGPLKALLTVIAEQVAGLEENIEQLYDDQFIETCA
                     NWAVPYIADLIGYRALDPRLQGRLGSARAEVANTIRFRRRKGTAAILEELALNITDWD
                     AAVVEFFLRLATTQYLNHIRRDHLGTANLRRVDALEAIGTPFDRLAHTADVRRIASGR
                     GRYNIPNIGIFLWRVGSHKLTESPAFRVDARRYLFSPLGAN"
BASE COUNT          387 a          722 c          749 g          325 t
ORIGIN      
        1 gtatcaagtt gagttcgtcc aaggacttca ccaactacac cctgcgcaag accgcagtgc
       61 tcgcgcagag cgagcaactg gagctggccg agctaccgat caccgatgtc gtcaagggca
      121 accggttggt cctcgacaag ccctacctgg gcctgacggt cggtcggccg gtggtcgtga
      181 ccggcgtacg cactgacctg gacggtgtta ccgatagcga ggtgatgact ctggccgagg
      241 tgacgttcaa caagggctat accgaactgg tgttcgtcgg cagcctggcc aacgagtacg
      301 agcgcgcgtc cgtgacggtc aatgccaacg tagcgctggc gacccatggc gaaaccaagg
      361 accaggcgct gggcagcggc gatgcgaaca agcctttcca gaagttccgc ctgcccgagg
      421 ctccgctgac ctatgtggcc gccgagaaca ccacgggcgc ggcctctacc ctgcaagtgc
      481 ggatcaacca gttgctctgg caggaggtcg acttcctgta tggccgcggc ccagacgagc
      541 acgtctacat cacgcgcacc gatgacgaag ggcgcaccta cgtccagttc ggcgacgggc
      601 ggaccggcgc gcgcgtgccg accgggcagg agaacgtgcg cgcgacctac cgcaagggca
      661 tgggcgcgga ggggctggtg gacgaggcgc agctgacgct gctgctcgtg aagccgctgg
      721 gcgtacgcag cgtcaccaat ccgctggccg cgggcgatgc cgcggatgcg gagagccgcg
      781 acgatgtgcg gcggaacgcc gcgctgccca tccgcaccct ggaccggatc gtctcgttgc
      841 gggactatga ggacttcgcc cgcgcgttca gcggggtggc caaggcgctg gcgacctgga
      901 cctggaacgg ccgccagcgc ggtgtgttcg tgaccgtcgc cggggcgggg ggcaaagcca
      961 tcgccgaggg cagcttgacc tacaagaacc tcctgtcggc catgctccag gccggcgatc
     1021 caaccgtgcc gctgcgggtc aagagctaca cgcccgcctt cttccgcctt gcgggcaacc
     1081 tgagcatcga tcccgtgtac cagaccgatc aggtgctggc ggcggtggag gcagcgctgc
     1141 gggcggcgtt ctccttcgac gcgcgtgagt tcggccagcc ggtcgccaag agcgaggtga
     1201 tcgccacgat tcaggcggtc aaaggtgtgc tggcggtgga cctgaacgcg ctgcaccgca
     1261 ccgacgcgac gaccgagcaa ttggcccaca ccacactttt cgacaggctg accgcgcaag
     1321 tgccgcgcgc agggaccgac gtgaccgtag ccgccgagtt gctgttgctc gacccgcggc
     1381 cggttcagct gggggtgatg aaggcatgag cctggatatc gaaaccatct acggccttct
     1441 gccggcggtc taccgcacgc gcgacgcggc cgtggcggag gcgtcggacg acctgctcac
     1501 gcctgaggag caggccgacc tgcaggcgct gcgcgatgca ttggccgccg gagggctcga
     1561 cgagacgcag cagcgcgacc tggcccggct ggaagagaag cggctgcgcg ggccacttaa
     1621 ggcgctgctc acggtgatcg ccgagcaggt ggccgggctc gaggagaaca tcgagcagct
     1681 ctacgacgac cagttcatcg aaacgtgcgc gaactgggcg gtgccctaca tcgccgacct
     1741 gatcggctac cgcgcgctcg acccgcggct gcaaggccgg ctgggcagcg cgcgcgccga
     1801 ggtagcgaac acgatccgct tcagacggcg caaaggcacc gccgcgatcc tggaagaact
     1861 ggcgctgaac atcaccgatt gggatgcggc tgtcgtggag ttcttcctcc ggctggcgac
     1921 cacccagtac ctcaatcaca ttcggcgcga ccacctgggc accgcgaatc tgcggcgcgt
     1981 ggatgcactg gaggccatcg gcaccccgtt cgaccgcctg gcccataccg cggacgtgcg
     2041 gcgcatcgcg agcggccggg gccgctacaa catccccaac atcggtattt tcttgtggcg
     2101 cgtgggcagc cacaaactga ccgaatcgcc ggccttccgt gtggacgcgc ggcgctacct
     2161 gttcagcccg ctgggcgcca aca
//
LOCUS       DASSVL010000330         3007 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_374987, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000330 DASSVL010000000
VERSION     DASSVL010000330.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3007)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3007)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3007
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_374987"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            1..747
                     /locus_tag="VFM52_05820"
     CDS             1..747
                     /locus_tag="VFM52_05820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007514607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HET8764718.1"
                     /translation="MAVTNVSRPTLTVYAPRGKNTGAAVVVFPGGGFEVLAIELEGTE
                     ACDWLVAQGVTCVLLKYRVPSLPYDWHTHDRPDDFVVPVQALDDAQRALGLVREHARA
                     WHVDPHKVGVLGFSAGGYLVAEISTHWLHRLYRPVDAADQQSARPDFALAIYPGHLVH
                     DDGTLNKNVPVTAATPPTFLVQAEDDHVDGVNQSLVYYAALAKAHVPAELHLYAHGGH
                     AFGLRRTQAPITAWPELAAAWLRTIGVLPP"
     gene            complement(750..1529)
                     /locus_tag="VFM52_05825"
     CDS             complement(750..1529)
                     /locus_tag="VFM52_05825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008207563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaminyl-peptide cyclotransferase"
                     /protein_id="HET8764719.1"
                     /translation="MKTLVAVFAFALFGWLAPAAARDAIPVYGYHVVHRYPHDPKAYT
                     EGLLYHDGFLYESTGQVGASSVRKVALASGKVLQSAPTPWPDYGEGIAIRKDKLIQLT
                     WRNQEGFLYDLATFKPLAKFSYPGEGWALTSDGRHLYMSDGTPVIRILDPDTLKQTGS
                     IAVTADGQPLQNINELEWVKGEIWANVWLTTRIARIDPASGKVVGWIELAGLVPPAST
                     LADPTNDVLNGIAYDAQHDRVFVTGKCWPWLYEIKLTAAKR"
     gene            1622..>3007
                     /locus_tag="VFM52_05830"
     CDS             1622..>3007
                     /locus_tag="VFM52_05830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008207561.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0051139 - metal cation:proton antiporter
                     activity [Evidence IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="monovalent cation:proton antiporter-2 (CPA2)
                     family protein"
                     /protein_id="HET8764720.1"
                     /translation="MDSQHFLQLAVVFLLATVIAVPLTKRFRLGSVLGYLLAGVAIGP
                     QVLGLVGDTEGVAAASEFGVVLMLFVIGLGLSPRRLWVMRRAVFGTGLVQVLATSLVI
                     GAIGWAWFGLAPGAATIVGGGLALSSTAFGLQILAERKQANSAYGRQAFAILLFQDLG
                     AIPLIAAVPVLAHSAATNGFDLSGTLRAVAVVTAVMVGGRYLLRPLFRFVAKADTVEV
                     STATALLVVTGVTLLMDLTGMSATLGAFLAGVLLADSEYRHEVESHIEPFKGLLLGLF
                     FVSVGMSMDVSLLLHQPLAVAGLVVALLVVKGSVLWPLGRYLAALGRADALRLAALLA
                     CGGEFAFVVLGEAATRHLISVPQRDLLVLAISLSMALTPLLVVGAARVLGAGHAGAPV
                     RSKDPAIAQPPRVIVAGYGRMGQIVSRVLRAQGIPFVALDHSAEQMDRVRRFGQWGDT
                     FYGDVTRPDLLR"
BASE COUNT          380 a          980 c         1094 g          553 t
ORIGIN      
        1 ctggccgtga ccaatgtctc gaggcccacg ctgacggtct acgcgccgcg tggaaagaac
       61 acgggcgccg ccgtcgtggt gttccctggc ggcggtttcg aggtgctcgc gatcgagctc
      121 gaaggcaccg aggcctgcga ctggctagtc gcgcagggcg tcacctgcgt gctgctgaag
      181 taccgcgtgc ccagcctgcc gtatgactgg cacacccacg atcgcccgga tgatttcgtg
      241 gtgccggtgc aggcgctgga cgatgcgcag cgtgcgctgg ggctggtgcg tgagcatgcc
      301 agggcgtggc atgtcgatcc gcacaaggtc ggcgtgctgg ggttctccgc aggcggttat
      361 ctcgtggccg agatcagcac gcattggtta catcgtctgt accgtccggt cgatgcggcg
      421 gatcagcaga gcgcgcggcc ggatttcgcg ctggcgatct atcccggcca tctcgtgcac
      481 gacgacggca cgttgaacaa gaacgtgccg gtcacggccg ccacgccgcc cacgttcctg
      541 gtgcaggcgg aagacgacca cgtggacggc gtgaaccagt cgctggtcta ttacgccgcg
      601 ttggcgaagg cgcacgtgcc ggcggagctg cacctctacg cgcatggcgg ccacgcgttc
      661 ggcctgcgtc gcacgcaggc tccgatcact gcctggccgg aactggccgc ggcgtggctg
      721 cgcacgatcg gcgtgttgcc gccctgaact cagcgcttcg ccgccgtcag cttgatctcg
      781 tacagccacg gccagcactt gccggtgacg aacacgcgat cgtgctgcgc gtcgtaggcg
      841 atgccgttca acacgtcgtt ggtcgggtcg gcgagggtgc tggccggcgg caccagcccg
      901 gccagctcga tccagccgac caccttgccg ctggccgggt cgatgcgcgc gatgcgcgtg
      961 gtgagccaca cgttggccca gatttcgccc ttgacccatt ccagctcgtt gatgttctgc
     1021 agcggctggc cgtcggcggt gacggcgatg ctgccggtct gcttgagcgt gtcgggatcg
     1081 aggatgcgga tcaccggcgt gccgtcgctc atgtacaggt gcctgccgtc gctggtcagc
     1141 gcccagccct cgccggggta ggaaaacttc gccagcggct tgaatgtcgc caggtcgtag
     1201 aggaagcctt cctggttccg ccaggtaagc tggatcagct tgtccttccg gatcgcgatg
     1261 ccttcgccgt agtccggcca cggcgtgggc gcggactgca gcaccttgcc gctcgccaat
     1321 gcgaccttgc gcacgctgga ggcaccgacc tggccggtgc tctcgtacag gaaaccgtcg
     1381 tgatacagca ggccttcggt gtaggccttg gggtcatgcg ggtagcggtg caccacgtgg
     1441 tagccgtaga ccgggatggc gtcgcgcgcg gccgcgggcg cgagccagcc gaagagggcg
     1501 aaggcgaaca cggcgacgag ggttttcatc cgcggatgat cccacgccgc cgccggacat
     1561 gttcgcattg ccgatgaacg tgcgcatgga ataatcggcc agcatcgttt ccggagcgcc
     1621 tgtggacagt cagcatttcc tccagctcgc ggtggtgttc ctgctggcca ccgtgatcgc
     1681 ggtgccgctc accaagcgct tccggctggg ctcggtgctc ggctacctgc tggccggcgt
     1741 ggcgatcggg ccgcaggtgc tgggcttggt cggcgacacc gagggcgtgg cggcggcgtc
     1801 ggaattcggc gtcgtcttga tgctgttcgt gataggcctc ggtctgtcgc cacggcggct
     1861 atgggtgatg cgccgcgcgg tgttcggcac cggcctggtg caggtgctgg cgaccagcct
     1921 ggtgatcggc gcgatcggct gggcgtggtt tggcctggcg ccgggcgcgg cgaccatcgt
     1981 cggcggcggg ctggcgttgt cgtcgaccgc gttcggcctg cagatcctgg ctgagcgcaa
     2041 acaggcgaac agcgcgtatg gccggcaggc gttcgcgatc ctgctgttcc aggatcttgg
     2101 cgccatcccg ctgattgcgg cggtgccggt gctggcgcac agcgccgcga ccaacggctt
     2161 cgacctgtcc ggcacgctgc gcgcggtggc ggtcgtcacc gcggtgatgg tgggcggccg
     2221 ttacctgctg cgcccgctgt tccgcttcgt cgccaaggcg gacacggtcg aggtgtccac
     2281 cgccaccgcg ctcttggtgg tgaccggggt gacgctgctg atggacctga ctggcatgtc
     2341 ggccacgctc ggcgccttcc tcgccggcgt actgctggcc gattcggaat accggcacga
     2401 ggtcgagtcg cacatcgagc cgttcaaggg gcttttgctc ggcctgtttt tcgtcagcgt
     2461 cggcatgtcg atggacgtgt cgctgctgct gcaccagccg ctcgcggttg ccggcctggt
     2521 ggtggcgctg ctggtggtga agggcagcgt gctgtggccg ctcgggcgct atctcgccgc
     2581 gctgggccgt gccgacgcgc tgcgcctggc ggcgctgctc gcctgtggtg gcgaattcgc
     2641 gttcgtggtg ctgggcgagg cggcgacgcg ccatctcatc agcgtgccgc agcgcgacct
     2701 gctggtgctg gcgatcagcc tgtcgatggc gttgacgccg ctgctcgtcg tcggcgcggc
     2761 gcgcgtgctg ggcgccggcc acgccggtgc gccggtgcgc agcaaggacc cggccatcgc
     2821 ccagccgccg cgcgtgatcg tcgccggcta cgggcgcatg gggcagatcg tgtcgcgcgt
     2881 gctgcgcgcc cagggcatcc cgttcgtggc gctcgaccat tcggccgagc agatggatcg
     2941 cgtgcgccgt ttcggccaat ggggcgacac cttctacggc gacgtcaccc ggcccgacct
     3001 gctgcgc
//
LOCUS       DASSVL010000331         2166 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_897822, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000331 DASSVL010000000
VERSION     DASSVL010000331.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2166)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2166)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2166
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_897822"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1371)
                     /gene="nirK"
                     /locus_tag="VFM52_05835"
     CDS             complement(<1..1371)
                     /gene="nirK"
                     /locus_tag="VFM52_05835"
                     /EC_number="1.7.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017463945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050421 - nitrite reductase (NO-forming)
                     activity [Evidence IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="copper-containing nitrite reductase"
                     /protein_id="HET8764721.1"
                     /translation="MKTVMCAAAMTATMLLAACGGGSSGKHSLLADIPAAHAAPAPLL
                     LAPPDFGPPQGAPIKAVLTSPPHVPPPIHRDYPAKVIVELEVVEKEMPISEGVSYTFW
                     TFGGTVPGSFIRVRQGDTVEFHLKNAPDSKMPHNIDLHGVTGPGGGAASSFTAPGHAS
                     QFTFKALNQGIYVYHCATAPVGMHIANGMYGLILVEPPEGLPKVDHEYYVMQGDFYTT
                     GKYREKGLQPFDMEKAIDEKPTYVLFNGKEGALTGDNALTAKTNESVRLFVGNGGPNL
                     VSSFHVIGEIFDRVQPEGGTVTQHNVQTTLIPAGGAAIVEFHTDVPGSYVLVDHSIFR
                     AFNKGALGILKVDGPENKLVYSGKEVDSVYLGDRSEPNLKAVSVAAKAHAAGTLTKDE
                     QIAAGKQLFTGTCSVCHQANGEGLPNVFPPLAKSDYLAADPKRAMSIVTHGLTGKVKV
                     NGHEYNS"
     gene            complement(1566..2117)
                     /locus_tag="VFM52_05840"
     CDS             complement(1566..2117)
                     /locus_tag="VFM52_05840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007507586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b/b6 domain-containing protein"
                     /protein_id="HET8764722.1"
                     /translation="MYFRHTPKHYSGALIALHWLTLLLLIAVYALIELRGIYPKGSDA
                     YQLMKTWHFMLGLTVLGLLPIRLLLRAVGGATPPIHPPLAVAQERLAKLVHLLLYLFL
                     LVMPVLGWLTLSAQGKVIPFFGLELPPLLGADKALGHQLEEIHETIGELGYYLIGLHA
                     AAALFHHYWTRDDTMRRMMLRRD"
BASE COUNT          340 a          700 c          747 g          379 t
ORIGIN      
        1 cgagttgtac tcgtgcccgt tgaccttgac cttgccggtc aggccgtggg tgacgatgct
       61 catcgcgcgc ttcgggtcgg cggccaggta gtcgctcttg gccagcggcg ggaacacgtt
      121 gggcaagccc tcgccattcg cctggtggca gaccgagcag gtgccggtga acagctgctt
      181 gccggcggcg atctgctcgt ccttggtcag cgtgccggcg gcgtgcgcct tggccgccac
      241 gctcactgcc ttgagattcg gctccgagcg gtcgcccagg tacaccgagt ccacctcctt
      301 gccggagtag accagcttgt tctccgggcc gtcgaccttg aggatgccca gcgcgccctt
      361 gttgaacgcg cggaagatcg agtggtcgac cagcacgtag ctgccgggca cgtcggtgtg
      421 gaactcgacg atcgcggcgc caccggcggg aatcagcgtg gtctgcacgt tgtgctgggt
      481 caccgtgccg ccttcgggct gcacgcggtc gaagatctcg ccgatcacgt ggaagctcga
      541 caccaggttc gggccgccgt tgccgacgaa caggcgcacg ctctcgttgg tctttgcagt
      601 gagcgcgttg tcgccggtga gcgcgccttc cttgccgttg aagaggacgt aggtcggctt
      661 ctcgtcgatc gccttctcca tgtcgaacgg ctgcaggccc ttctcgcggt acttgcccgt
      721 ggtgtagaaa tcgccctgca tcacgtagta ctcgtggtcc accttcggca ggccttccgg
      781 cggctcgacc aggatcaggc cgtacatgcc gttggcgatg tgcatgccca ccggcgcggt
      841 cgcgcagtgg tagacgtaga tgccctggtt gagcgccttg aaggtgaact gcgaggcgtg
      901 gccgggcgcg gtgaagctcg acgccgcgcc gccgccggga ccggtcacgc cgtgcaggtc
      961 gatgttgtgc ggcatcttgc tgtcgggcgc gttcttcagg tggaactcca cggtgtcgcc
     1021 ctggcgcacg cggatgaagc tgccgggcac ggtgccgccg aaggtccaga aggtgtagct
     1081 gacgccctcg gaaatcggca tctccttctc caccacttcc agctcgacga tcaccttcgc
     1141 cgggtagtcg cggtggatcg gcggcggcac gtgcggcgga ctggtcagca ccgccttgat
     1201 cggcgcgccc tgcggcgggc cgaagtcggg cggcgccagc agcaggggcg cgggggcggc
     1261 gtgggccgca gggatatcgg ccagcagcga atgcttgccg gatgatccgc caccacacgc
     1321 ggcaagcagc atcgtggcgg tcatcgcggc ggcacacatt acggtcttca tggagttgct
     1381 cctcgtggtc cgggggcatg ctccacggct gaaccgcaac gaaatttgat cgcaatcaat
     1441 tgcgcgcgag tggtgctgca agtgcgtcac ccagccacat gtgcgcttgt gtccacgatg
     1501 gcaaaaggtc gcacaaacgc gaacggcccg cgcttgcggg ccgttcgtca cgatgctgcc
     1561 acgagtcagt cgcggcgcag catcatgcgc cgcatggtgt cgtcgcgcgt ccagtagtga
     1621 tggaacagcg cggccgcggc gtgcaggccg atgaggtagt aaccgagctc gccgatcgtc
     1681 tcgtggatct cttcaagctg gtggcccagc gccttgtcgg cgccgagcag cggcggcaac
     1741 tccagcccga agaacgggat caccttgccc tgcgcgctga gcgtgagcca gccgagaacc
     1801 ggcatcacca gcaggaacag gtacagcagc aggtgcacca acttggccag ccgctcctgc
     1861 gcgacagcga gcggcgggtg gatgggcggc gtggcgccgc cgaccgcgcg cagcagcagc
     1921 cggatcggca gcaggcccag caccgtcagc ccgagcatga agtgccaggt cttcatcagc
     1981 tggtacgcgt cgctgccctt ggggtagatg ccgcgcagct cgatcagcgc gtacaccgcg
     2041 atcagcagca gcagggtcag ccaatgcagc gcgatcaacg caccgctgta gtgcttcggg
     2101 gtatgacgga aatacattcg ggctcctcgt ggcaacgacc ggaccccgct ggcctggccc
     2161 ggtcgt
//
LOCUS       DASSVL010000332         2253 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_855620, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000332 DASSVL010000000
VERSION     DASSVL010000332.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2253)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2253)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2253
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_855620"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(190..1221)
                     /locus_tag="VFM52_05845"
     CDS             complement(190..1221)
                     /locus_tag="VFM52_05845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007513741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8764723.1"
                     /translation="MDFPKPALRDPSNVISYASYLLVAVGLLLVIDLHLLPALLAGLL
                     VFELVQSMAPLLGRRISGDRARLVVVAVLGAIVVGLLLLLILGAISLFRHELGNPELL
                     WQQQLMPLVEKARQQLPPALVNNLPDSVDDLRVGAIELARKHAGALQLAGKGAVRVFV
                     HILIGLVLGAIVALGRARPAHQIGPLAAALSLRCLRLAQGFHNIVFAQIKISLINTVF
                     TAIFLLGVLPLLGVHVPLAKTLVVATFIVGLLPVIGNLISNTAITIAGLSVSLSVGIA
                     ALAFLILIHKLEYFLNARIVGTQIHARAWELLLAMLLMEAAFGLPGVIAAPIYYAYLK
                     LELEAWGLV"
     gene            1356..2237
                     /locus_tag="VFM52_05850"
     CDS             1356..2237
                     /locus_tag="VFM52_05850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008438480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family acid phosphatase"
                     /protein_id="HET8764724.1"
                     /translation="MPLRLPASLLAFALLAGCAATPLRHPEVVSSPAAPATVAANDNL
                     NAVAWTQTAIEHDLIYLQTYRDAEAGLLAALQDQGWDALAKDDRAAPLRGLKPAVVLD
                     IDETVLDNSPYQARLVKSGGEYNEADWAAWCKEEAARALPGAVAFTRFAARHGIAVIY
                     ISNRAKDLDQATLANLRKAGLPVSGPEAFLGLGTFVEGCEQIGTEKGCRRQLVSRKYR
                     VLMQFGDQIGDFVTVLANNAAGRQRAIAPYLGWIGSRWFVLPNATYGSWEPALFNNDW
                     AQPETRQRSAKIEQLHY"
BASE COUNT          416 a          773 c          736 g          328 t
ORIGIN      
        1 aacgcctgaa aaaacgtgtg tcgcatgtat tcaactcccc tggaaatgac cgccccatac
       61 ggccgttgcg cccgtgggcg aatggctctt gatccccgaa gatagcagga actttgcgct
      121 cggcgaagaa gctgcgcgca ccggcagcgg accgtccgcc gtcctgctcg attcatccgt
      181 cgaccaccct cacaccaacc cccacgcttc cagttccagt ttcaggtagg cgtagtagat
      241 cggtgcggcg atgacgcccg ggaggccgaa ggcggcttcc atcagcagca tcgccaacag
      301 caactcccag gcacgggcat ggatctgggt gccgacgatg cgggcgttga ggaagtattc
      361 gagcttgtgg atcaggatca ggaacgccag cgcggcgatg cccacgctca gcgacaccga
      421 cagcccggcg atggtgatgg cggtgttgga aatgaggttg ccgatcaccg gcagcaggcc
      481 gacgatgaag gtcgccacca ccagcgtctt ggccagcggc acgtggacgc cgagcagcgg
      541 cagcacgccg agcaggaaga tcgcggtgaa cacggtgttg atcagcgaga tcttgatctg
      601 cgcgaacacg atgttgtgga acccctgcgc cagccgcagg cagcgcaggc tcagtgcggc
      661 cgccagcggg ccgatctggt gcgccggccg tgcgcggccg agcgccacga tcgcgcccag
      721 caccaggccg atgaggatgt gcacgaaaac ccgcaccgca cccttgccgg ccaattgcag
      781 ggcaccggca tgcttgcgcg ccagctcgat cgcgcccacg cgcaggtcgt cgacgctgtc
      841 gggcaggttg ttgaccaggg ccggcggcaa ttgctggcgc gccttttcca ccagcggcat
      901 caattgttgc tgccagagca gctcggggtt gccgagctcg tgccggaaca ggctgatcgc
      961 gccgaggatc agcaacagca gcaggccgac cacgatggcg cccagcacgg ccaccaccac
     1021 cagtcgcgcg cggtcgccgg aaatgcgccg gcccagcagc ggcgccatcg actgcaccag
     1081 ctcgaacacc agcaggccag cgagcagggc cggcagcagg tgcaggtcga tgaccagcag
     1141 caggcccacc gcaaccagca ggtagctggc atagctgatg acgttcgagg gatcgcgcaa
     1201 ggcgggcttg gggaaatcca tgcgagacga aaccagagtg ggagagcagg cagtctgtca
     1261 gcagcccgcg gccgctgcca gccccgccga aaccgtcatg tggctgtcgt aaactcgggc
     1321 gcctgcccac gtcgccccgc cccaaggatc tgcgcatgcc acttcgtttg cccgcgagcc
     1381 tgctcgcgtt cgccctgctg gccggttgtg cggccacccc actccgccat cccgaggtcg
     1441 tctcctctcc tgccgcgccc gcgaccgtcg ccgccaacga caacctcaat gccgtggcgt
     1501 ggacccagac cgcgatcgag cacgacctga tttacctgca gacctatcgc gatgccgaag
     1561 cgggcctgct ggccgccctg caggaccaag gctgggatgc actggccaag gacgaccgcg
     1621 ccgcgccgct tcgcggcctc aagccggccg tggtgctgga catcgacgag accgtgctgg
     1681 acaactcgcc ctaccaggcg cgcctggtca aaagcggcgg cgagtacaac gaggccgatt
     1741 gggccgcctg gtgcaaggag gaggccgccc gcgcgctgcc cggcgcagtc gcgttcaccc
     1801 ggttcgccgc ccggcatggc atcgccgtca tctacatctc caaccgcgcc aaggatctgg
     1861 accaggccac cctggccaac ctgcgcaagg ccggcctgcc ggtgtccggg ccggaagcct
     1921 tcctcggcct gggcaccttc gtcgaaggct gcgagcagat cggcacggag aagggttgcc
     1981 ggcgccagct ggtcagccgc aagtaccgcg tgctgatgca gttcggcgac cagatcggcg
     2041 acttcgtgac ggtgctggcg aacaatgccg ccggtcgcca gcgggcgatc gcgccgtacc
     2101 tgggctggat cggctcgcgc tggttcgtgc tgccgaatgc gacctacggc tcgtgggagc
     2161 cggcgctgtt caacaacgac tgggcccagc cggaaacgcg ccagcgctcg gccaagatcg
     2221 agcagttgca ttattgatca ataatttacg aca
//
LOCUS       DASSVL010000333         2995 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_21971, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000333 DASSVL010000000
VERSION     DASSVL010000333.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2995)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2995)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2995
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_21971"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..215
                     /locus_tag="VFM52_05855"
     CDS             <1..215
                     /locus_tag="VFM52_05855"
                     /inference="COORDINATES: protein motif:HMM:NF012656.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HET8764725.1"
                     /translation="LAAGEAGAAVRASHAKLACADAAWTAARKAIQVHGAMGYTWEVD
                     LQMFMKRAWVLDAEPMPAIGPGATFG"
     gene            285..1436
                     /locus_tag="VFM52_05860"
     CDS             285..1436
                     /locus_tag="VFM52_05860"
                     /EC_number="2.3.1.9"
                     /inference="COORDINATES: protein motif:HMM:NF005865.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA C-acetyltransferase"
                     /protein_id="HET8764726.1"
                     /translation="MPEAYIIDALRSPTGKKKGGLAMVHGADLGAHEIRAIVERNQVP
                     AEDYDDVVFGCVDTIGALAGDIARTAWLTAGMPDCVPGVTVDRQCGSSQQAVHFAAQA
                     VMSGTQDVVLAGGVQTMTRIPISSAMLAGQPLGFTTPFAESIGWRARYGDQPVNQFYA
                     AQRIADHWNVSRADMELFALHSHERALAAIAAGHFDREIVPYGEVRMDETPRHTTLEK
                     MAALEPVDPKYPKITAAVSSCTCDAAAAILVASEAAVKRYGLKPRARIVHMSARADDP
                     IWHLTAPIAATRHALKKSGMALADMDIVEINEAFASVVLAWLKETRYPYERINVKGGA
                     IALGHPLGATGAKLMTTLLHEMERRGSRYGLQTMCEGGGQANVTILERL"
     gene            1447..2322
                     /locus_tag="VFM52_05865"
     CDS             1447..2322
                     /locus_tag="VFM52_05865"
                     /inference="COORDINATES: protein motif:HMM:NF005861.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HET8764727.1"
                     /translation="MGICDGRTVIITGAGGGLGRAYAQTFAAEGANVVVNDIRREAAQ
                     AVVAEITAAGGKALANDGDITSLAGAKAIVEAAIAAFGDVQVLVNNAGVLRDHMFLSL
                     TEEDWDTVMRVHLRGHFCLANVLGNHWRAQKKAGQGVDARIINTTSGAGLQGSVGQSN
                     YSAAKGGIAAQTLEQAPEHARYGITANCLAPAARTSMTEGAMPELVKKPEHGFDVWDP
                     RNVASIVVWLGSPQSAGVTGRCFEAKGGELSVADGWRTGKIADKGGRWAPAELGPVVA
                     RLLADAVPAQKVWGT"
     gene            2325..>2995
                     /locus_tag="VFM52_05870"
     CDS             2325..>2995
                     /locus_tag="VFM52_05870"
                     /inference="COORDINATES: protein motif:HMM:NF014790.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HET8764728.1"
                     /translation="MDLALDDDQQAMVHAAADFLAEACDAQAMRTAADSADGMDRALW
                     RGIVEQGWCVVAASEEEGGLGLGHVGLALLQEQLGRRLAGVPFFESVIEAGALLHAVG
                     QREPALLAGVLEGAVVVPALHPGEAGAVPTPDGDWQLDGTWPQVPAAAWADNFLLWID
                     GPVPRLFWLPSPELHVEPLAMVDTTRRSARVTAHGVRVPASALLAEGDALLAARDTAR
                     DLAALA"
BASE COUNT          457 a         1025 c         1099 g          414 t
ORIGIN      
        1 cactcgcggc aggcgaggcg ggggccgcag tgcgcgcgtc gcacgccaag ctggcctgcg
       61 cggatgccgc gtggaccgcc gcgcgcaagg cgatccaggt gcacggcgcc atgggctaca
      121 cctgggaagt ggatttgcag atgttcatga agcgcgcgtg ggtgctcgac gccgagccga
      181 tgccggcgat cgggccgggg gccacgtttg gttgagttgg aatcgggagc cggcgcggcg
      241 acgcgtagcg gcttccggca ctggacacac gaggtagctg caccatgcca gaggcataca
      301 tcatcgatgc gctgcgctcg cccaccggca agaagaaggg cgggttggcg atggtgcacg
      361 gggccgacct cggcgcgcac gagatccgcg ccatcgttga gcgcaaccag gtgcccgcgg
      421 aggattacga cgacgtcgtc ttcggttgcg tcgacaccat cggcgcgctg gccggcgaca
      481 ttgcgcgcac cgcgtggctc accgccggca tgccggactg cgtgcccggc gtcaccgtgg
      541 atcgccagtg cggcagctcg cagcaggcgg tgcatttcgc cgcgcaggcg gtgatgagcg
      601 gcacccagga tgtcgtgctg gccggcggcg tgcaaaccat gacgcgcatc ccgatcagct
      661 cggcgatgct cgccggccag ccgctcggtt tcaccacgcc gttcgccgaa agcatcggct
      721 ggcgcgcgcg ctacggcgac cagccggtca accagttcta cgccgcgcag cgcatcgccg
      781 accactggaa cgtcagccgc gccgacatgg agctgttcgc gctgcacagc catgaacgcg
      841 cgctcgccgc catcgctgcc ggacatttcg accgcgagat cgtgccgtat ggcgaggtgc
      901 gcatggacga gacgccgcgc cacaccacgc tggagaaaat ggccgcgctg gaaccggtcg
      961 acccgaagta ccccaagatc accgccgcgg tgtcgagctg cacctgcgac gcggctgcgg
     1021 cgatcctcgt cgcctcggaa gccgcggtga agcgctatgg cctcaagccc cgcgcgcgca
     1081 tcgtgcacat gtcggcgcgc gcggacgacc cgatctggca cctcaccgcg cccatcgccg
     1141 ccacccgcca cgcgctgaag aaatccggca tggcgctggc cgacatggac atcgtcgaga
     1201 tcaacgaggc gttcgcctcg gtggtgctcg cgtggctcaa ggaaacccgc tacccgtacg
     1261 agcgcatcaa cgtcaaaggc ggtgcgatcg cgcttggcca cccgctcggc gcgaccggcg
     1321 ccaagctgat gaccacgctg ctgcacgaaa tggagcgccg cggcagccgc tacggcctgc
     1381 agaccatgtg cgaaggcggc ggccaggcca acgtcaccat ccttgaacgg ctgtagggga
     1441 gcatccatgg gtatttgcga cggacgcacc gtcatcatca ccggcgccgg cggcggcctc
     1501 ggccgcgcct acgcgcagac gtttgccgcc gagggcgcca acgtggtcgt caacgacatc
     1561 cgccgcgagg ccgcgcaggc cgtggtggcc gagatcaccg ccgccggcgg caaggcgctg
     1621 gcgaacgatg gcgacatcac ttcgctggcc ggcgccaagg ccatcgtcga ggcggccatc
     1681 gccgcgttcg gcgacgtgca ggtgctggtc aacaacgccg gcgtgctgcg cgaccacatg
     1741 ttcctctcgc tcaccgagga ggattgggac accgtgatgc gcgtgcacct gcgcgggcat
     1801 ttctgcctgg cgaacgtgct cggcaaccac tggcgcgcgc agaagaaggc gggccaaggg
     1861 gtcgacgcgc gcatcatcaa caccacttcc ggcgcgggcc tgcagggctc ggtcgggcag
     1921 agcaactact cggcggccaa gggcggcatc gccgcgcaga cgctggagca ggcgccggaa
     1981 cacgcacgct acggcatcac cgccaactgc ctggcgccgg ccgcgcgcac ctcgatgacc
     2041 gagggcgcga tgccggagct ggtgaaaaag cccgagcacg ggttcgacgt gtgggatccg
     2101 cgcaacgtcg ccagcatcgt ggtgtggctg ggcagcccgc agtccgccgg cgtcaccggg
     2161 cgctgcttcg aggccaaggg tggcgagctg tcggtggccg atggctggcg caccggaaag
     2221 atcgccgaca agggcgggcg ctgggcgccg gccgagctcg gcccggtggt ggccaggctg
     2281 cttgccgacg cggtgcctgc gcagaaggtg tggggcacct gagcatggat ctcgccctcg
     2341 acgacgacca gcaggcgatg gtgcatgcgg cggcggattt cctcgccgag gcgtgcgacg
     2401 cccaggcgat gcgcaccgcg gcagacagcg ccgacggcat ggatcgcgcg ttgtggcgcg
     2461 gcatcgtcga gcagggctgg tgcgtggtcg ccgcgagcga ggaggaaggc ggcctcggcc
     2521 ttggccacgt cgggctggcg ctgctgcagg aacaactcgg ccggcgtctt gccggcgtgc
     2581 cgtttttcga aagcgtgatc gaggccggcg ccttgctgca tgccgtcggc cagcgcgagc
     2641 cggcgctgct cgcgggcgtg cttgaaggcg ccgtcgtggt gccggcgctg catccgggcg
     2701 aggctggcgc ggtgcccacg ccggatggcg actggcagct tgacggcacc tggccgcagg
     2761 tgcctgccgc cgcgtgggcg gacaattttc tgctgtggat cgacggtccg gtgccgcggc
     2821 tgttctggct gccgtcgccc gagctgcacg tcgagccgct ggcgatggtc gataccacgc
     2881 gccgcagcgc gcgcgtcacg gcgcacggcg tgcgcgtgcc ggcgtcggcg ctgctggccg
     2941 agggcgacgc gttgctcgcc gcgcgcgaca ccgcgcgtga tctcgcggcg ctggc
//
LOCUS       DASSVL010000334         2409 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_657754, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000334 DASSVL010000000
VERSION     DASSVL010000334.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2409)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2409)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2409
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_657754"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1459)
                     /gene="flgK"
                     /locus_tag="VFM52_05875"
     CDS             complement(<1..1459)
                     /gene="flgK"
                     /locus_tag="VFM52_05875"
                     /inference="COORDINATES: protein motif:HMM:TIGR02492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009424 - bacterial-type flagellum hook
                     [Evidence IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-associated protein FlgK"
                     /protein_id="HET8764729.1"
                     /translation="MASLFSIGVSGLNAAQMGLQATSNNIANAGTDGYSRQSTVQVDR
                     VGQDMGRYTTGSGVDVIAVQRAYNQYLTQSLWSSAGSMQAASTTNDLTAALNGYLKNS
                     GNLQTALDSFYGGFNAVANAPQDPSARQAAIGNAQTLVMAFNTFGQQLDQQRVQINGQ
                     ITATVAGINSATKQIAALNNQISQAGNSQPNALLDQRDSLIQQLAGQTGIAATPQPDG
                     SISIYSSSGQVLVAGNNSYALQTGASAYAAGTTVVLDPSGHDISSQLSGGALGALLSY
                     RGNTLDAAQNQLGRAALAVAQGVNAQQAKGLDLTGGQGQPLFIVPYPSVAMFKGNQGT
                     ATVAAQVSDIGKLTTDNYVLTNTGSNAPPSTNGWALATTSGRSVPLTANPDGTLSAEG
                     LTFSVAGSAQVGDNFEIRPTQNAASGIAMATTNPSAIAASAALAATPGNTNTGAASVG
                     SVTVAASANPALFTPATVTFGAGNTYSVNGGASQAF"
     gene            complement(1482..>2409)
                     /gene="flgJ"
                     /locus_tag="VFM52_05880"
     CDS             complement(1482..>2409)
                     /gene="flgJ"
                     /locus_tag="VFM52_05880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015448511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016798 - hydrolase activity, acting on
                     glycosyl bonds [Evidence IEA];
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="flagellar assembly peptidoglycan hydrolase FlgJ"
                     /protein_id="HET8764730.1"
                     /translation="ARQFEALFTQMMLKSMRAASDSFGSGLGDSDAGKAYRDLFDQQL
                     AVSLAQNGKGLGIAQMLVRQLGGGVKPTSAGAGAYIGALGGTGLAAGSAGGADDTGDA
                     AGIGDPTQLPATAEEFRNRLDALLASGRAVGHSAARWVPQDANEFVAALAPYAQAAAR
                     QLGVSVRSVLAQAALETGWGKRMPRGANGAASFNLFGIKAGSGWDGRKVSVPTLEYEN
                     GVAVRKHAQFRAYDSPAQSFKDYANLLGSDPRYASVRGHGDDVRGFAQALVRGGYATD
                     PAYAAKVAAIAASPQMRDALAALKNPANPPNN"
BASE COUNT          285 a          796 c          899 g          429 t
ORIGIN      
        1 tgaaagcctg gctggcgccg ccgttcacgc tgtaggtgtt gccggcaccg aaggtgacgg
       61 tggccggagt gaacagcgcc gggttggcgc tggcggcgac ggtgaccgaa cccacgctgg
      121 cggcgccggt gttcgtgttg cccggcgtcg cggccagcgc ggcggaggcg gcgatcgcgg
      181 acgggttggt ggtggccatc gcgatgccgc tggcggcgtt ctgcgtgggc cggatctcga
      241 agttgtcgcc cacctgggcg ctgccggcga cggagaacgt caggccttcg gcgctgagcg
      301 tgccgtccgg gttggcggtg agcggcacgc tgcgcccact ggtggtggcc agcgcccagc
      361 cattggtgga tggtggcgcg ttgctgccgg tgttggtcag cacgtagttg tcggtggtga
      421 gcttgccgat gtcgctgacc tgggcggcca ccgtggccgt gccttggttg cctttgaaca
      481 tcgccacgct ggggtacggc acgatgaaca gcggttggcc ttgcccgccg gtcaggtcga
      541 gacccttggc ctgctgcgcg ttgactcctt gcgccacggc gagcgcggca cggccaagct
      601 ggttctgcgc cgcatcaagg gtattgccgc ggtagctgag cagcgcgccg agcgcgccgc
      661 cggaaagctg cgaactgatg tcgtggccgc tcgggtcgag caccacggtg gtgccggcgg
      721 cgtacgcgct ggcgccggtc tgcagggcgt acgagttgtt gccggccacc agcacctggc
      781 cggagctgct gtagatgctg atgctgccgt ccggctgcgg cgtcgccgcg atgccggtct
      841 gcccggccag ttgctggatc aggctgtcgc gctggtcgag cagggcattg ggctgcgaat
      901 tgccggcctg gctgatctgg ttgttcagcg cggcgatctg cttggtggcc gagttgatgc
      961 cggccacggt ggcggtgatc tggccgttga tctgcacgcg ctgctggtcg agctgctggc
     1021 cgaaggtgtt gaacgccatc accagcgtct gcgcgttgcc gatcgccgcc tgccgcgcgg
     1081 acgggtcctg cggcgcattg gcgaccgcgt tgaagccgcc gtagaaactg tccagggcgg
     1141 tctgcaggtt gccgctgttc ttgaggtagc cgttgagcgc ggcggtgagg tcgttggtgg
     1201 tgctggcggc ctgcatgctg ccggcgctgc tccacaagga ctgcgtgagg tactggttgt
     1261 aggcgcgctg caccgcgatc acgtcgacgc cgctgccggt cgtgtagcgg cccatgtcct
     1321 ggccgacgcg gtcgacctgc accgtgctct ggcggctgta gccgtcggtg ccggcattgg
     1381 cgatgttgtt gctggtggcc tgcaggccca tctgggccgc attgagcccc gagacaccga
     1441 tgctgaacaa actggccatg gctgtgtcgt ccggaaatca gtcagttgtt cggcgggttt
     1501 gccggattct ttaaggcggc cagcgcgtcg cgcatctgcg ggctggcggc gatcgccgcc
     1561 accttcgccg cgtacgccgg atcggtggcg tagccgccgc gcaccagcgc ttgcgcgaag
     1621 ccgcgcacgt cgtcgccgtg gccgcgcacg ctggcgtagc gcgggtcgct gccgagcagg
     1681 ttggcatagt ccttgaacga ctgcgccggg gaatcgtagg cgcggaattg cgcgtgcttg
     1741 cgcaccgcca cgccgttttc gtactcgagc gtgggcacgc tcaccttgcg cccgtcccag
     1801 ccgctgccgg ccttgatgcc gaacaggttg aagctggccg cgccgttggc gccgcgcggc
     1861 atgcgcttgc cccagccggt ttccagtgcc gcctgcgcca gcacgctgcg caccgaaacc
     1921 ccgagctgcc tggcggccgc ctgcgcgtac ggcgccagcg cggcgacgaa ttcgttggca
     1981 tcctgcggca cccagcgcgc ggcgctgtgg cccactgcgc ggccggacgc aagcagtgca
     2041 tccagccggt tgcggaactc ctcggccgtc gccggcagct gcgtcgggtc gccgatgccg
     2101 gcggcatcgc ccgtatcgtc ggcgccaccg gcgctgccgg cggcaaggcc ggtgccgccc
     2161 agcgcgccga tgtacgcgcc ggcgccggcg gaggtcggct tgaccccgcc gccgagctgg
     2221 cgcaccagca tctgcgcgat gcccagcccc ttgccgttct gcgccaggct caccgccagc
     2281 tgctggtcga acaggtcgcg gtatgccttg ccggcgtcgc tgtcgcccaa gccggagccg
     2341 aagctgtcgc tcgcggcgcg catcgacttc agcatcatct gggtgaacag cgcctcgaac
     2401 tggcgggcg
//
LOCUS       DASSVL010000335         2178 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_982609, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000335 DASSVL010000000
VERSION     DASSVL010000335.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2178)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2178)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2178
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_982609"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            370..693
                     /locus_tag="VFM52_05885"
     CDS             370..693
                     /locus_tag="VFM52_05885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8764731.1"
                     /translation="MNTRTPLFAGLAACAMLFGSAAVAQQSVASPSSTPTPPPIVTVR
                     SAQPTAPTIAPPPSFQTLSGGSKWITSAQAAAYPPLANDFLNASRGADRINQTQYAAW
                     VKQMK"
     gene            complement(783..1175)
                     /locus_tag="VFM52_05890"
     CDS             complement(783..1175)
                     /locus_tag="VFM52_05890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017464158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0030261 - chromosome condensation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HU family DNA-binding protein"
                     /protein_id="HET8764732.1"
                     /translation="MATKTTAKKAPAKAAKPAPKAAPAAVKPIKETLTKSGLITHLAQ
                     QASVETKHVKAVLAALEQTVLGAVNKKGAGQFTLPGLFKVNAVKVPAKPKRTGINPFT
                     KQEQVFAAKPATVKVKVRPLKKLKDAAI"
     gene            complement(1285..>2178)
                     /locus_tag="VFM52_05895"
     CDS             complement(1285..>2178)
                     /locus_tag="VFM52_05895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008207967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formylglycine-generating enzyme family protein"
                     /protein_id="HET8764733.1"
                     /translation="EIYAGHKPGQVFTDRYVDLPGQSPAMVVIPTGSFLMGAAGGGTR
                     YPAELPQHKVAMARGFAMARSAITVGQFREFVRGSGYVPDSVRLGGAGVYDERSGVMR
                     DDERATWQDDYAGHPAADHLPVVNVSWNDAKAYADWLSRRTGKVYRLPSEAEFAYALR
                     GGTLTRYWWGDGTPSSRVENLTGAKDRSPSGRRWSHAFRDYGDGHWGPAAVMSFEPNP
                     FGLYDMGGNVSEWVADCWHDNYVHAPSDGSAWLNPGCSVRVLRGGSWGSSPDQARSAW
                     RQGANADVRSGRVGFRVIREL"
BASE COUNT          356 a          775 c          675 g          372 t
ORIGIN      
        1 tgcaggccca tgagcaaggc atgcgccaaa gcctgctcga tgccgccgcg gatcccggta
       61 cgcgccccta cctcgcggca cgttgccgcg tgctggccac gcagctcgaa caggcgctgc
      121 atggccgcac atgcgacggt acgccgcaca cggccaggca ctgaactgcc ccgaggcacc
      181 ctttgtgatc gccccgcgtg acgatccgcg ttccacaacg accgccaacg ttcacaccca
      241 ctgcacggga atattgcggc gcgatttaga cacgggctgc taggtttttc gaccggcggt
      301 tccggttccc gtggttttgc ttcaccccgg cgccgcctgc attccctcgg tcacaaagga
      361 gtatcgagca tgaatacacg cactccgctg tttgccggcc tcgccgcttg cgccatgctt
      421 ttcggcagcg cggcagttgc ccagcagtcg gtcgcctccc ccagcagtac cccgacgcca
      481 ccgcccattg tcacggtgcg cagcgcgcaa cccaccgccc cgaccattgc accgccgccg
      541 tcgttccaga ccttgtccgg cggcagcaaa tggatcacct cggcgcaagc ggccgcctat
      601 ccaccactgg cgaatgattt cctgaatgcc agccgcggcg ccgaccgcat caaccagacg
      661 caatacgccg cctgggtgaa acagatgaaa tgagtggcct gtccgcgtaa ccacccgcgc
      721 agacatgaca agggccgcat ccgcggccct tgtcatgtct ggctgacgcc gacgcgcgcg
      781 aatcagatcg cggcgtcctt gagcttcttc agcggacgca ccttgacctt gacggttgcc
      841 ggcttggcgg caaagacctg ttcctgcttg gtgaacgggt tgatgccggt gcgcttcggc
      901 ttggccggca ccttgaccgc attgaccttg aacaggcccg gcagggtgaa ctggccggca
      961 cctttcttgt tcacggcacc aagcaccgtc tgctcgagcg cggccagcac cgccttgacg
     1021 tgcttggttt cgacgctcgc ctgctgggcg aggtgcgtga tgagaccgga cttggtcaac
     1081 gtttccttga tcggcttgac ggcagcggga gcggctttcg gcgccggctt cgcggccttg
     1141 gcaggggctt tcttggcagt ggtcttggta gccatgggca tccatcgtga tgattgagac
     1201 accaccccgt gtggggcgat ggccatgcgg cccgcacaat ttacgcgaaa ttcgcggcca
     1261 tggtgcattt tcgcctgcgc aaactcacaa ctcgcggatc acgcgaaagc ccacgcgccc
     1321 actgcgcacg tccgcattgg caccctgccg ccacgccgag cgcgcctggt caggcgagct
     1381 gccccacgag ccgccgcgca atacgcgcac gctgcagccg gggttgagcc acgcgctgcc
     1441 gtcgctcggt gcatgcacgt agttgtcgtg ccagcagtcg gccacccatt cgctgacatt
     1501 gccgcccatg tcgtacaggc cgaacggatt gggctcgaag ctcatgaccg cggccggccc
     1561 ccagtggcca tcgccgtagt cgcggaacgc atggctccag cgccggccac tgggggaacg
     1621 gtccttcgca ccggtgagat tttccacccg cgacgacggc gtgccgtcgc cccaccagta
     1681 gcgcgtgagc gtgccgccgc gcaacgcgta ggcgaactcg gcctcgctcg gcaggcgata
     1741 gaccttgccg gtacgccggc tgagccagtc ggcgtaggcc ttggcgtcgt tccacgacac
     1801 attcaccacc ggcaggtggt cggcggccgg atgaccggcg tagtcgtcct gccaggtcgc
     1861 gcgctcgtcg tcgcgcatga caccactgcg ctcgtcgtag acgccggcac cgccaagacg
     1921 cacggagtcg ggcacataac cgctgccccg cacgaattcg cggaactggc cgacagtgat
     1981 cgcgctgcgc gccatggcga acccgcgggc catggcgacc ttgtgctgcg gcaattcggc
     2041 cgggtagcgg gtgccgccgc cagccgcgcc catcaggaac gagccggtcg gaatcaccac
     2101 catcgccggc gactgccccg gcagatcgac gtagcggtcg gtgaacacct gccccggctt
     2161 gtggccggca tagatttc
//
LOCUS       DASSVL010000336         2396 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1166001,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000336 DASSVL010000000
VERSION     DASSVL010000336.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2396)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2396)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2396
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1166001"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..177)
                     /locus_tag="VFM52_05900"
     CDS             complement(<1..177)
                     /locus_tag="VFM52_05900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007508562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TraB"
                     /protein_id="HET8764734.1"
                     /translation="MSVPEAALPAALADQPIERVVRDGVEYVVLGTAHVSRVSMEAVQ
                     ALLERETFDAVAVEL"
     gene            complement(370..1260)
                     /locus_tag="VFM52_05905"
     CDS             complement(370..1260)
                     /locus_tag="VFM52_05905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006451810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon-nitrogen hydrolase"
                     /protein_id="HET8764735.1"
                     /translation="MTRKTLKVALLQETDRGSRGANLDAIEAGLREAARAGAELVLLQ
                     ELHNGPYFCQHEAVDLFDLAESIPGPSTERLGRLAGELKLVVVASLFEKRAAGLYHNT
                     AVVFDRSAAIAGKYRKMHIPDDPAFYEKFYFTPGDLGFEPVQTSVGKLGVLVCWDQWY
                     PEAARLMALSGAELLLYPTAIGWDPNDAQAEKDRQREAWITVQRGHAVANGLPLLSCN
                     RTGFEPDPSGTGSGIRFWGSSFVAGPQGEFLAQAGTDARELLITEIDMQRSEHVRRIW
                     PFLRDRRIDAYADLLRRFRD"
     gene            complement(1277..2311)
                     /locus_tag="VFM52_05910"
     CDS             complement(1277..2311)
                     /locus_tag="VFM52_05910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008436424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="agmatine deiminase family protein"
                     /protein_id="HET8764736.1"
                     /translation="MTDSSLRLPAEWEPQSAVLIAWPHAGTDWAERLAEVETTYVALA
                     VAVTRFQPLIVVAADAAVHAHAEQLLRAARADLARIRFVELPYDDTWLRDSGPITLKA
                     DDGHFQLADFRFTGWGGKFDAEQDDALIAGLVEAGVFGEAAHRRIDWALEGGGIESDG
                     AGSVLTTWKCLHQRHPEQSRAAMDAILMDSLHASRILWLDHGYLEGDDTDAHIDTLAR
                     FAPGEHIVYQACDDAGDKHHAELARMGAELAALRTVDGRPYTLHPLPWARPIIDEGRR
                     LAASYANYLIVNGAVLVPAYGDAADDAAARIIEAAHPGREVVQVPCRPLIWQNGSLHC
                     ITMQLPAGLA"
BASE COUNT          346 a          806 c          871 g          373 t
ORIGIN      
        1 cagctccacc gccaccgcat cgaaggtctc gcgctcgagc agcgcctgca ccgcctccat
       61 gctcacccgc gagacgtggg ccgtgcccag caccacgtat tccacgccgt cgcgaaccac
      121 gcgctcgatg ggctgatccg caagcgcggc gggcagggcg gcttcgggaa cactcatgcg
      181 cgggtcgtgc cggtcgtggg gagagcccaa gcatggggac gccgcccgcg cgacgcaagc
      241 tcgccgtgga aagtgcggtc agggacggcc gcccgtttga cgtccgccat cagggacgat
      301 ggcaggtgcc agccccagtg cggccaagga cgcccacccg tttgattccc gcgatccgaa
      361 ccgtaggcac taatccctga agcgcctgag cagatccgca tacgcgtcga tgcggcggtc
      421 gcgcaggaat ggccagatgc gccgcacgtg ttcgctgcgc tgcatgtcga tctcggtgat
      481 gagcagctcg cgcgcatcgg tgccggcttg cgcgaggaac tcgccctgcg gcccggccac
      541 gaagctgctg ccccagaacc ggatgccgct gccggtgccg ctggggtcgg gctcgaagcc
      601 ggtgcggttg caggacagga ggggcaggcc gttggccacc gcgtggccgc gctgcacggt
      661 gatccaggct tcgcgctggc gatccttttc ggcttgcgca tcgttcggat cccagccgat
      721 cgcggtgggg tagagcagca gctccgcgcc ggagagcgcc atcagccgcg cggcctccgg
      781 gtaccactgg tcccagcaca ccagcacgcc cagcttgccc accgaggtct ggaccggctc
      841 gaagccgagg tcgccgggcg tgaagtagaa cttctcgtag aaggccggat cgtccgggat
      901 gtgcatcttg cggtacttgc ccgcgatggc ggcggagcgg tcgaacacca cggcggtgtt
      961 gtgatacagc ccggccgcgc gcttctcgaa cagcgaggcc accaccacca gcttgagttc
     1021 cccggccagc cggccgaggc gttcggtgct cgggcccggg atgctctcgg cgaggtcgaa
     1081 cagatccacc gcttcgtgct ggcagaagta cgggccgttg tgcagctcct gcagcagcac
     1141 cagctcggcg ccggccctgg ccgcctcgcg cagaccggct tcgatggcgt cgagattggc
     1201 gccgcggctg ccgcggtcgg tttcctgcag cagggcgact ttgagtgtct tgcgggtcat
     1261 tgcggggtac ctttgttcac gccagcccgg cgggcagttg catggtgatg cagtgcaggc
     1321 tgccgttctg ccagatcagt ggacggcagg gcacctgcac cacttcgcgt cccggatggg
     1381 cggcctcgat gatgcgcgcg gccgcgtcgt cggccgcgtc gccgtaggcg ggcaccagca
     1441 cggcgccgtt gacgatcagg tagttggcgt aggaagccgc caggcggcgg ccttcgtcga
     1501 tgatgggccg cgcccacggc agcggatgca gcgtgtacgg acggccgtcg acggtgcgca
     1561 gtgcggccag ttccgcgccc atgcgcgcca gttcggcgtg gtgcttgtcg ccggcgtcgt
     1621 cgcaggcctg gtacacgatg tgctcgccgg gtgcgaagcg ggcgagggtg tcgatgtgcg
     1681 cgtcggtgtc gtcaccttcc aggtagccgt ggtccagcca caggatgcgg ctggcgtgca
     1741 ggctgtccat caggatcgcg tccatcgccg cgcggctctg ctcgggatgg cgctggtgca
     1801 ggcacttcca ggtggtcagc acgctgccgg cgccgtcgct ctcgatgccg ccgccctcca
     1861 gcgcccagtc gatgcgccga tgcgcggcct cgccgaacac gccggcctcg accaggcccg
     1921 cgatcagcgc atcgtcctgc tcggcgtcga acttgccgcc ccagccggtg aagcggaaat
     1981 cggcgagctg gaagtggccg tcgtcggcct tcagcgtgat cgggccggag tcgcgcagcc
     2041 aggtgtcgtc gtagggcagc tcgacgaagc ggatgcgggc gaggtcggcg cgtgccgcgc
     2101 gcagcaactg ctcggcgtgc gcgtgcaccg cggcgtcggc cgcgaccacg atcaggggct
     2161 ggaagcgcgt cacggcgacg gccagcgcca cgtaggtggt ttccacctcg gccaggcgct
     2221 cggcccagtc ggtgccggcg tgcggccagg cgatcagcac ggcggattgc ggctcccatt
     2281 cggccggcag gcgcaagctg gaatcggtca tggagacgac actcgcgcta aagagatggc
     2341 ccggagactg gccgggcagg caagtgtgca agtttacgat ggcgcggaag cttgtg
//
LOCUS       DASSVL010000337         3334 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_120734, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000337 DASSVL010000000
VERSION     DASSVL010000337.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3334)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3334)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3334
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_120734"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2931)
                     /locus_tag="VFM52_05915"
     CDS             complement(<1..2931)
                     /locus_tag="VFM52_05915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007809798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015930 - glutamate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate synthase central domain-containing
                     protein"
                     /protein_id="HET8764737.1"
                     /translation="MSHPHAQGLYDPRFEHDACGVGFVAHIKGRKSHAIIEQGLAILK
                     NLNHRGAVGADPLMGDGAGVLIQIPDALYREDLAQQGISLPPPGEYGVGMIFLPKEKA
                     SRLACEQELERKVRAEGQVLLGWRDVPVDHAMEMSPTVKAKEPVIRQIFIGRGPDVMV
                     PDALERKLYVIRKTASHAIRALGLKYGGEYFVASMSTRTVVYKGLLLSTQVGRYYADL
                     ADPRAVSALALVHQRFSTNTFPEWELAHPYRMIAHNGEINTVKGNVNWINARTGAISS
                     AVLGDDLPKLWPLIYPGQSDTASFDNCLELLTMAGYPLAHAMMMMIPEAWEQHTLMDA
                     NRRAFYEYHAALMEPWDGPAAIAFTDGRQVGATLDRNGLRPARYVITDDDLVVLASEA
                     GVLPIPEASIVKKWRLQPGKMLLIDMDAGRIIDDQEIKDQLANARPYKQWIERISVRL
                     DDLPAPRPEPRSEASLLDSQQAFGFTMEDLKFQLLPMAENGQEALGSMGNDTPLAVLS
                     SKNRSLYDYFRQTFAQITNPAIDPIREQLVMSLTSFIGPKPNLLDINNINPPLRLEVT
                     QPVLGFADMAKLRKIARYSKNKFRSHTLDITYPVAWGAAGIEARLASLCAQAVDAIKQ
                     GHNILIVSDRHADRERVAIPALLATSAVHQHLVARGLRTSTGLVVETGSAREVHQFAL
                     LAGYGAEAIHPYLAMETLERHYANAPNGVTAELAIAHYVKAINKGLQKVMSKMGISTY
                     MSYTGAQIFEAVGLSHELVDKYFTGTTSNIEGIGLFELAEESLHQHQAAWGDDPVLAD
                     SLADGGDYAWRVRGEEHMWTPDAIAKLQHATRSNNAHDYQEYSDIINDQTRRHMTLRG
                     LFEFKFDPAGPLPIDEVEPVEAIVKRFATGAMSLGSISTEAHTSLAIAMNRIGGKSNT
                     GEGGEDPARYRAELKGEAIKDGDTLAGVIGRQHIERDLPLKAGDSLRSRIKQVASGRF
                     GVTAA"
     gene            complement(3076..>3334)
                     /locus_tag="VFM52_05920"
     CDS             complement(3076..>3334)
                     /locus_tag="VFM52_05920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008211506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="EamA/RhaT family transporter"
                     /protein_id="HET8764738.1"
                     /translation="RWRFTPRSVLGGIALGACNFGNILFYLQAHRALPQNPALVFASM
                     NLGVVALGALTGVLIFREQLSRVNLTGVALALAAIGLLTVA"
BASE COUNT          501 a         1084 c         1163 g          586 t
ORIGIN      
        1 cgccgcggtg acgccgaagc ggccggaggc cacctgcttg atccgcgaac gcagcgagtc
       61 gccggccttg agcggcaggt cgcgctcgat gtgctgccgg ccgatcacgc cggcgagggt
      121 gtcgccgtcc ttgatcgcct cgcccttcag ctccgcgcgg taacgcgccg gatcctcgcc
      181 gccctcgccg gtgttcgact tgccgccgat gcggttcatc gcgatcgcga gcgaggtgtg
      241 tgcctcggtg gagatcgagc cgagcgacat cgcgccggtg gcgaagcgct tgacgatggc
      301 ctccaccggc tcgacctcgt cgatcggcag cgggccggcg ggatcgaact tgaactcgaa
      361 cagcccgcgc agcgtcatgt gccggcgcgt ctggtcgttg atgatgtccg agtattcctg
      421 gtagtcgtgc gcgttgttgc tgcgcgtcgc gtgctgcagc ttggcgatcg cgtcgggcgt
      481 ccacatgtgc tcctcgccgc gcacgcgcca ggcgtagtcg ccgccgtcgg cgagcgagtc
      541 ggcgagcacc gggtcgtcgc cccacgcggc ctggtgctgg tgcagcgatt cctccgccag
      601 ctcgaacagg ccgatgccct cgatgttgga cgtggtgccg gtgaagtact tgtccaccag
      661 ctcgtgcgac aggccaacgg cctcgaagat ctgcgcgccg gtgtaggaca tgtaggtgct
      721 gatgcccatc ttggacatca ccttctgcag gcccttgttg atcgccttga cgtagtgcgc
      781 gatcgccagc tcggcggtga cgccgtttgg cgcgttggcg tagtggcgtt cgagcgtctc
      841 catcgccagg tacggatgga tcgcctcggc gccgtagccg gcaagcagtg cgaactggtg
      901 cacctcgcgc gccgagccgg tttccaccac cagcccggtc gaggtgcgca ggccgcgcgc
      961 gaccaggtgc tggtgcacgg ccgaggtcgc caggagcgcg gggatcgcca cccgctcgcg
     1021 atcggcatgg cggtcggaga cgatcaggat gttgtggccc tgcttgatcg cgtccaccgc
     1081 ctgcgcgcac agcgaggcca gccgcgcctc gatgccggcg gcgccccacg ccaccggata
     1141 ggtgatgtcc agcgtgtggc tgcggaactt gttcttggaa tagcgcgcga tcttgcgcag
     1201 cttcgccatg tcggcaaagc cgagcaccgg ctgggtcact tccagccgca gcggcgggtt
     1261 gatgttgttg atgtccagca ggttcggctt gggcccgatg aacgaggtca ggctcatcac
     1321 cagctgctcg cggatcgggt cgatcgccgg gttggtgatc tgcgcgaagg tctggcggaa
     1381 gtagtcgtac agcgagcggt tcttcgagct gagcacggcg agcggcgtgt cattgcccat
     1441 cgagccgagc gcttcctggc cgttctcggc catcggcaac agctggaact tcaggtcttc
     1501 catggtgaag ccgaacgcct gctgggagtc gagcaggctg gcctcgctgc gcggctccgg
     1561 gcgcggcgcg ggcaggtcgt ccaggcgcac gctgatgcgc tcgatccact gcttgtacgg
     1621 gcgcgcgttg gcgagctggt ccttgatctc ctggtcgtcg atgatgcgcc cggcatccat
     1681 gtcgatcagc agcatcttgc ccggctgcag gcgccacttc ttgacgatgc tggcctcggg
     1741 gatcggcagc acgccggcct cggaggcaag caccacgagg tcgtcgtcgg tgatcacgta
     1801 gcgcgccggg cgcaggccgt tgcggtcgag cgtggcgccg acctggcggc cgtcggtgaa
     1861 cgcgatcgcg gccgggccgt cccacggctc catcagcgcc gcgtggtact cgtagaacgc
     1921 gcgccggttg gcgtccatca gcgtgtgctg ctcccacgcc tccggaatca tcatcatcat
     1981 cgcgtgggcc agcgggtagc cggccatggt cagcagttcg aggcagttgt cgaacgaggc
     2041 ggtgtccgac tggccggggt agatcagcgg ccacagcttg ggcaggtcgt cgccgagcac
     2101 cgccgaggag atcgcgccgg tgcgcgcgtt gatccagttg acgttgccct tgaccgtatt
     2161 gatctcgccg ttgtgcgcga tcatgcggta cgggtgcgcc agctcccact cggggaaggt
     2221 gttggtggag aagcgctggt gcaccagcgc cagcgcggaa accgcgcgcg ggtcggcgag
     2281 gtcggcgtag tagcggccga cctgggtgga aagcaagagg cccttgtaga ccacggtgcg
     2341 ggtcgacatc gaggccacga aatactcgcc gccgtacttc aaacccagcg cgcggatcgc
     2401 gtggctcgcg gtcttgcgga tcacgtacag cttgcgctcc agcgcgtcgg gcaccatcac
     2461 gtcggggccg cggccgatga agatctggcg gatcaccggc tccttcgcct tcaccgtcgg
     2521 cgacatctcc atcgcgtggt cgaccggcac gtcgcgccag ccgagcagca cctggccctc
     2581 ggcgcgcacc ttgcgctcca gctcctgctc gcaggcgagg cgcgaggcct tttccttggg
     2641 caggaagatc atgcccacgc cgtattcgcc gggcggtggc agggagatgc cctgctgcgc
     2701 gaggtcctcg cggtacagcg cgtcgggaat ctggatcagc acgccggcgc cgtcgcccat
     2761 cagcggatcg gcaccgaccg cgccgcgatg gttgaggttt ttgaggatcg ccaacccctg
     2821 ctcgatgatg gcgtggcttt tgcgcccctt gatatgggcg acaaaaccga cgccacaggc
     2881 gtcgtgctcg aagcgcgggt cgtacagacc ctgggcgtgc gggtggctca tggctcctct
     2941 cccgagggcg ggcgtcaccc cgaatatact gcaccgcagc aagcgcgcaa gcagaccact
     3001 gaaaattttt ggcgcggacg tctataaggc caaacgccgt gacgccgatc taggaatttt
     3061 tcgtagcccg acgctttagg cgacagtgag caggccgatc gcggccagcg ccaatgccac
     3121 gccggtcagg ttcacccggc tcagttgctc gcgaaatatc agcacgccgg tcagtgcgcc
     3181 gagcgcgacc acgccgagat tcatgctggc gaacaccagc gccgggtttt gcggcaaggc
     3241 acgatgggcc tggaggtaga acaggatgtt gccgaagttg catgcgccga gcgcgatgcc
     3301 acccagcacg ctgcgcggcg tgaagcgcca gcgt
//
LOCUS       DASSVL010000338         3680 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_333088, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000338 DASSVL010000000
VERSION     DASSVL010000338.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3680)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3680)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3680
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_333088"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(143..394)
                     /locus_tag="VFM52_05925"
     CDS             complement(143..394)
                     /locus_tag="VFM52_05925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008294947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2274 domain-containing protein"
                     /protein_id="HET8764739.1"
                     /translation="MSATRKLRLGPLPDTQTVKLAFTCPARLKADLDRYATLHAQTYG
                     EAVDAVTLIPLMLEAFMARDRSFRRAGSASRAKPAGATG"
     gene            complement(391..1698)
                     /locus_tag="VFM52_05930"
     CDS             complement(391..1698)
                     /locus_tag="VFM52_05930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008434995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TrbI/VirB10 family protein"
                     /protein_id="HET8764740.1"
                     /translation="MDTTDRETPPAPKVAPEPKVAPERMALRAAPRPVTRLNRRTLAV
                     SAALLAITIAGASMWALQSKGRRGPADQSNLYNVDRVAKADDLEQLPANYSKLPRKPA
                     PAPAASVPQLGPPLPGAFGTASAATPLPPDATPPGPSAATVDAQHQAEQVARSGVFFR
                     TGSDVGQRTATAAVPAATTPAGALASAFNPMGTEPATSAQPNDPTAIQNRQNQKEAFL
                     AKGGDVATRNTGTLQAPASPYTVMAGTIIPAALVTGINSDLPGQIIAEVTQSVYDTAT
                     GRYLLIPQGSRLIGRYDSQVAFGQRRVLLVWLRLVLPDTSSIALDKLPGIDPAGYAGL
                     EDGVDWHWSRILAGAALSTLLGVSSELSVSNEGDINGNTVLALRDSAQDTVNQVGQEI
                     TRRNLSIQPTLTVRPGFRVNVMVNKDLVLRPYQPLFFQQGPMP"
     gene            complement(1685..2695)
                     /gene="trbG"
                     /locus_tag="VFM52_05935"
     CDS             complement(1685..2695)
                     /gene="trbG"
                     /locus_tag="VFM52_05935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008434993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009291 - unidirectional conjugation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="P-type conjugative transfer protein TrbG"
                     /protein_id="HET8764741.1"
                     /translation="MKHAIAVLGIFGALGALAGCATTGKPPPVISLDAPVQAEPLPEP
                     AKPVAVVEVPKLLPLPGQMKPLPDQKTDAKPAPEPADAKARVEQANAEASVAPTRAGY
                     INAIQVWPFSDGALYQVYTSPGRVTMIRLQPGEELVTVAAGDTVQWIVGDTASGSGAS
                     RRVAVMVKPVRAGIKTNLVITTNRRTYLLELTSTPKAWMASVSWEYPKDQMLALQAQA
                     RTAAAQAPVADGVSLDQLHFRYAITGDDPPWRPVRAFDDGRHVYIQFPAGIAQGELPP
                     LFVVGSDGKGELVNYRFHAPYDIVDRLFGAAELRLGGKKAAVVRIERTDGVAAGAGHG
                     HD"
     gene            complement(2692..3396)
                     /gene="trbF"
                     /locus_tag="VFM52_05940"
     CDS             complement(2692..3396)
                     /gene="trbF"
                     /locus_tag="VFM52_05940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003056121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TrbF"
                     /protein_id="HET8764742.1"
                     /translation="MRFKRAGVRYSTTPAPATPYQAAAQMWDQRLGSARVQAKNWRLM
                     AFGCLGLALLMAAGLVWQSGESRVTPYVVEVDHAGQVRAVGAAVTPYKPTDAQIAWYL
                     ARFITDVRSLSIDPVVVRRNWLEAYGYATDHGAATLNAYARAHDPFAHVGQDSVSVNI
                     TSVVRVSDASFQVRWVEQHYHQGTPTDSEHWTAMLTLVMQTPRTEQQVRRNPLGIYIN
                     GLSWSRDLDAPQGVKP"
     gene            complement(3409..>3680)
                     /locus_tag="VFM52_05945"
     CDS             complement(3409..>3680)
                     /locus_tag="VFM52_05945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008434991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="P-type conjugative transfer protein TrbL"
                     /protein_id="HET8764743.1"
                     /translation="AAGARAVRERVASAAGPRPRGGAGATPAPAAAAVAGNDSPANNR
                     APDWAQRLQRRQRISQGASTAAHVVRMADRGGGGAAPELRDSSNE"
BASE COUNT          547 a         1255 c         1249 g          629 t
ORIGIN      
        1 cgccaacgcc tcatcccgca ggagataggc acgacctttg gcaaggcgat cgtctatgta
       61 ttgttcgagc gaggccatgc ctggatcata tgcgaaaaac tacgtttttt gtagagtttc
      121 gcatatgact ggggccccac ccctaccctg ttgcgccggc tggcttcgcc ctggatgccg
      181 accccgctcg ccgaaagctg cgatcccgcg ccatgaacgc ctccagcatc agcggaatca
      241 gcgtcaccgc gtcgaccgcc tccccgtagg tctgcgcatg cagcgtagcg tagcggtcga
      301 ggtcggcttt gagccgagcc ggacacgtaa aggccagctt gacggtctgc gtatcaggca
      361 gcggtcccag ccgcagcttg cgtgtcgcac tcatggcatc ggcccctgtt ggaagaagag
      421 cggctggtac ggccgcagca ccagatcctt gttcaccatc acgttcaccc ggaatcccgg
      481 ccgcaccgtc agcgtcggct ggatgctcag gttgcggcgc gtgatctcct ggccgacctg
      541 gttgaccgtg tcctgcgcac tgtcacgcag cgccagcacc gtgttgccgt tgatgtcgcc
      601 ctcgttggaa accgacagct cggagctgac gcccagcagc gtggacaatg cggcgcccgc
      661 caggatgcgg ctccagtgcc agtccacgcc atcctccagg ccggcataac ccgccgggtc
      721 gatgccgggc agcttgtcca aggcaattga cgaggtatcg ggcagcacca gccgcagcca
      781 caccagcagc acgcggcgtt gcccgaacgc cacctggctg tcgtagcggc caatgagccg
      841 cgaaccctgc gggatcagca gatagcgacc cgtcgcggtg tcgtacaccg actgcgtcac
      901 ctcggcgatg atctgccccg gcaggtcgga gttgatgccg gtgaccagcg cggccgggat
      961 gatggtgccg gccatcacgg tgtagggcga agccggcgcc tgcaaggtgc ccgtgttgcg
     1021 cgtggcgaca tcgccgcctt tggcgaggaa cgcctctttc tggttctgcc ggttctggat
     1081 ggccgtggga tcgttgggtt gtgctgacgt ggccggctcc gtacccattg gattgaaggc
     1141 actcgccagg gcgccggctg gagttgttgc ggctggcaca gccgccgtcg cggtgcgctg
     1201 gccaacatcg ctgccggtgc ggaagaacac ccccgagcgc gcgacctgtt cggcttggtg
     1261 ctgcgcgtcg accgtcgcgg ctgacggccc gggtggcgtc gcatcgggtg gcaacggtgt
     1321 cgcagccgac gctgttccaa aagcaccagg cagtggcggc ccgagctgcg gcacgctggc
     1381 ggccggggcc ggcgccggtt ttctgggcag cttcgagtag ttggcaggca gttgctccag
     1441 atcgtcggcc ttggcgaccc gatcgacgtt gtacaggttg ctttgatcgg ccggcccacg
     1501 gcgacccttc gattgcaacg cccacatgga ggcgcccgcg atggtgatcg ccagcagcgc
     1561 ggcggatacg gccaacgtgc ggcgattgag ccgcgtcacg gggcgcgggg ccgcgcggag
     1621 cgccatgcgc tcgggtgcga cctttggctc gggcgcgacc ttcggcgcgg gcggcgtttc
     1681 gcggtcagtc gtgtccatgc ccggctcccg cggccacgcc atcggtgcgc tcgatgcgta
     1741 ccacggcggc cttcttacct cccaggcgca gttcggccgc gccgaacagt cggtccacaa
     1801 tgtcgtaggg cgcgtggaac cggtagttca cgagctcgcc cttgccatcc gacccgacca
     1861 cgaacagcgg cggcaattcg ccctgcgcga tgcccgccgg aaactggatg tagacgtgcc
     1921 ggccatcgtc gaaggcccgc accggccgcc atggcggatc gtcgcccgtg atcgcatagc
     1981 ggaagtgcaa ctggtcgagt gaaaccccat cggccaccgg cgcctgtgcg gcggcggttc
     2041 gcgcctgggc ctgcaacgcc agcatctgat ccttcgggta ttcccacgag accgaggcca
     2101 tccaggcctt cggggtggac gtgagttcca gcaggtaagt gcgccggttg gtggtgatga
     2161 cgaggttcgt cttgatgccc gcgcgcaccg gcttgaccat cacggcgacg cgtcggcttg
     2221 cgccgctgcc gctggcggtg tcgcccacga tccactgcac ggtgtcgccg gcggcgaccg
     2281 tcaccagttc ctcgcccggc tgcaggcgga tcatcgtcac gcgaccggga ctcgtgtaga
     2341 cctgatacag cgcgccatcg gagaacggcc agacctggat cgcgttgatg tagcccgcgc
     2401 gcgtgggcgc cacgctcgcc tcggcgttgg cctgctcgac ccgcgccttc gcgtcggcgg
     2461 gctctggggc tggcttcgcg tccgtcttct ggtcgggcaa tggcttcatc tggccgggca
     2521 gcggcaggag cttgggcacc tccactaccg cgaccggctt ggccggttct ggcagcggct
     2581 cggcctgtac cggtgcatcc agcgaaatga ccggcggcgg tttgccggtg gttgcacaac
     2641 cggcaagcgc gcccaatgcg ccgaagatgc ccaggacagc gatcgcgtgt ttcatggctt
     2701 gactccttgc ggtgcgtcca ggtcgcggct ccaggacagc ccgttgatgt agatcccgag
     2761 gggattgcgc cgcacctgtt gttcggtacg cggcgtctgc atgaccagcg tgagcatcgc
     2821 ggtccagtgc tcgctgtcgg tgggggtacc ctggtggtag tgctgctcga cccagcgcac
     2881 ctggaacgag gcgtcgctca cgcgcaccac gctggtgatg ttgaccgaca ccgagtcctg
     2941 cccgacgtgg gcgaacggat cgtgggcgcg cgcataggca ttcagcgttg ccgcaccgtg
     3001 gtcggtggcg tagccatagg cttcgagcca gttccgccgc accaccaccg ggtcgatgga
     3061 cagcgaacgc acatcggtga tgaagcgcgc gagataccac gcgatctgcg cgtcggttgg
     3121 cttatagggc gtgaccgccg caccgactgc gcgcacctgc ccggcgtgat cgacctcgac
     3181 cacgtagggt gtgacgcgcg actcgccgga ctgccacacc aagcccgcgg ccatcagcag
     3241 tgcaagcccc aggcaaccga acgccatcag ccgccagttc ttcgcctgca cgcgggcgct
     3301 gcccagccgc tggtcccaca tctgcgccgc cgcctggtag ggcgttgccg gcgcgggcgt
     3361 cgtgctgtag cggacaccgg ctcgtttgaa gcgcatcgtt cgcctccgtc actcgttcga
     3421 ggaatcccgc agctccggtg cagccccgcc accgccacga tcggccatgc gcacgacgtg
     3481 cgctgcggtc gaagcgcctt gcgagatacg ctgacgacgc tgcaagcgct gcgcccagtc
     3541 cggtgctcgg ttattggctg gggagtcgtt cccggctaca gccgctgctg cgggcgcagg
     3601 cgttgccccc gcaccgccgc gcggacgcgg cccggccgcc gaagcgacgc gttcgcgcac
     3661 cgcgcgggca ccggcagcga
//
LOCUS       DASSVL010000339         2054 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_261974, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000339 DASSVL010000000
VERSION     DASSVL010000339.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2054)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2054)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2054
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_261974"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..364)
                     /gene="yidC"
                     /locus_tag="VFM52_05950"
     CDS             complement(<1..364)
                     /gene="yidC"
                     /locus_tag="VFM52_05950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017461668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0051205 - protein insertion into membrane
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertase YidC"
                     /protein_id="HET8764744.1"
                     /translation="MKQTRNFLLFALLAVAYFLFMAWEKDYLQPPAPPATAAAASAAT
                     VPNAQVPTAQVPSAPPVAGAAPTVANTANPGAPTPLITVDTDVLHLTIDTRGGSIVRA
                     KLLDYLVKPRTHKDPHPAP"
     gene            complement(457..837)
                     /gene="rnpA"
                     /locus_tag="VFM52_05955"
     CDS             complement(457..837)
                     /gene="rnpA"
                     /locus_tag="VFM52_05955"
                     /EC_number="3.1.26.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015449214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004526 - ribonuclease P activity
                     [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease P protein component"
                     /protein_id="HET8764745.1"
                     /translation="MRAAGLPRATRLRQASEFQALRTSSGRLGGRCFHLRYRPNGLPH
                     ARLGLAISKRVSKLAVERNRLKRLLRESFRHARTGLPAVDIVVMARNEAAGRPNAELR
                     ADAEALWLRLAGAPMPPAPAPADH"
     gene            complement(852..986)
                     /gene="rpmH"
                     /locus_tag="VFM52_05960"
     CDS             complement(852..986)
                     /gene="rpmH"
                     /locus_tag="VFM52_05960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020393644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L34"
                     /protein_id="HET8764746.1"
                     /translation="MKRTFQPSKLKRARTHGFRARMATADGRKVLNARRAKGRKRLIP
                     "
     gene            1196..>2054
                     /locus_tag="VFM52_05965"
     CDS             1196..>2054
                     /locus_tag="VFM52_05965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007809826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaA/Hda family protein"
                     /protein_id="HET8764747.1"
                     /translation="MSELWRRCLERLEGELSAEDLHTWLMPLQAREDAAGLALYAPNP
                     YTLDAVRERYLAQITTLLGQLAGRPLAVRLEVGSSSSGPREPAHTGTTGGNGATAGAA
                     ATPVPAWHHNLDPHYTFETFVEGKSNQLGKAAAMQVAQNPGRAYNPLLLYGGTGLGKT
                     HLMHAAGNLMRQHTPACKVLYLRSEQFVGAMIEALRTKSMDQFKLRFRSVDALLIDDI
                     QFFAGKDTTQEEFFHTFNALFESKQQIILTCDRYPKEVDKLEPRLKSRLGWGLSVAIE
                     PPDFETRAAI"
BASE COUNT          330 a          671 c          744 g          309 t
ORIGIN      
        1 tcggcgccgg gtgcgggtcc ttgtgcgtgc gcggcttcac caggtagtcg agcagcttgg
       61 cgcgcacgat gctgccgcca cgggtgtcga tggtgaggtg cagcacgtcg gtgtcgacgg
      121 tgatgagcgg cgtcggcgca cccgggttgg cggtgttcgc aaccgtcggc gcggcacccg
      181 cgaccggcgg tgccgacggc acctgcgcgg tgggcacctg cgcgttcggc acggtcgccg
      241 cgctggcggc cgccgcggtg gccggcggtg cgggcggctg caggtaatcc ttctcccagg
      301 ccatgaacag gaagtaggcg accgcgagca gggcgaacag gaggaagttg cgggtttgtt
      361 tcatcgggtc acggatccgg acgaccccat gcggcacgcg gccaccgggg gtggaagaag
      421 gtcaacgcgc gattgtggcg ggcgcgggag ttggcatcaa tggtcggcgg gcgccggggc
      481 gggcggcatc ggcgcgccgg caagccgcag ccacagagct tccgcatcgg cgcgaagttc
      541 cgcattgggc cggcccgcag cctcgttgcg cgccatcacc acgatatcca ctgccggcag
      601 gccggtgcgg gcgtggcgga acgactcgcg cagcaggcgc ttcaggcgat tgcgctcgac
      661 cgccagcttg gagacgcgct tggaaatcgc cagccccagc cgcgcgtgcg gcaggccgtt
      721 gggccggtag cgcaaatgaa aacagcggcc accaaggcgg ccgctgctcg tgcgcaacgc
      781 ttgaaactcg ctggcctgac gcaaccgcgt cgcgcgcggc aggccggcag cacgcatgtc
      841 ctgcgcgccg cttacgggat caggcgcttg cggcccttgg cgcgacgggc gttgagcacc
      901 ttgcggccgt cggcggtggc catgcgggca cggaagccgt gggtgcgcgc gcgcttgagc
      961 ttgctgggct ggaaagtccg cttcatggcg tagctccgaa gggaatgaat gtcggtgaaa
     1021 aggttggcga ttatgtggtg cgccgcggca agctgtcaaa tcgccctgcc gcgcgccgca
     1081 caggcccggt gggcaaacct gtgcatgaaa agtggccggg ctgcgccggg gcgtgctggt
     1141 agactcgtcg atccaccctg cgcgcaagcg cccctgcctg tggacgagat acttcatgag
     1201 tgagttgtgg cggcgctgcc tcgagcgtct ggaaggcgaa ttgagcgccg aggatctgca
     1261 cacctggctg atgccgctgc aggcacgcga ggatgccgcc gggctggcgc tgtacgcgcc
     1321 caacccgtac acgctggatg cggtgcgcga gcgctacctg gcgcagatca ccaccctgct
     1381 tggccagctt gccggccgac cgctcgcggt gcggctcgag gtggggtcca gcagcagcgg
     1441 cccgcgcgaa ccggcgcaca ccggcaccac tggcggcaac ggcgccacgg cgggtgccgc
     1501 ggcgacccca gtgccggcgt ggcaccacaa tctcgacccg cactacacgt tcgaaacctt
     1561 cgtcgagggc aagtccaacc agctgggcaa ggctgccgcg atgcaggtgg cgcagaaccc
     1621 gggccgtgcc tacaacccgc tgctgctgta cggcggcacc ggcctgggca agacccatct
     1681 gatgcacgcc gccggcaacc taatgcgcca gcacaccccg gcgtgcaagg tgctctacct
     1741 gcgctcggaa cagttcgtgg gcgcgatgat cgaggcgctg cgcaccaaga gcatggacca
     1801 gttcaagctg cgcttccgct cggtggatgc gctcttgatc gacgacatcc agttcttcgc
     1861 cggcaaggac accacgcagg aggagttctt ccacaccttc aacgcgctgt tcgagtccaa
     1921 gcagcagatc atcctcacct gcgaccgtta ccccaaggaa gtggacaagc tggagccgcg
     1981 gctgaaatcg cgcctgggct ggggcctgtc ggtagcgatc gaaccgccgg atttcgagac
     2041 gcgtgcggcg attt
//
LOCUS       DASSVL010000340         2371 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1194477,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000340 DASSVL010000000
VERSION     DASSVL010000340.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2371)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2371)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2371
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1194477"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1553
                     /gene="ptsP"
                     /locus_tag="VFM52_05970"
     CDS             <1..1553
                     /gene="ptsP"
                     /locus_tag="VFM52_05970"
                     /EC_number="2.7.3.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017462154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008965 - phosphoenolpyruvate-protein
                     phosphotransferase activity [Evidence IEA];
                     GO_process: GO:0006808 - regulation of nitrogen
                     utilization [Evidence IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="phosphoenolpyruvate--protein phosphotransferase"
                     /protein_id="HET8764748.1"
                     /translation="RSKLHGALAREVNEFIDAHSLLLDDAELLRGLDDLVKIGHYRAG
                     AALKKQRDKLAAVFEAMDDPYLRGRKEDIEQVISRVISALQRQTSAEERKLAARVGEL
                     LVADTIAPGDMAQLAGNGLLGVVASGSSAYSHSAILARSLGLPMLVGARDALSMIHDD
                     DLILLDGEHAEAIIHPTAQDLARYRGWQREAAAEGRRLATLANAPTRTRDGTTIHLLA
                     NAETVSDVALARARGADGVGLYRTEFLFLKHKRLPTEEEQFTAYRDLVLGMGGRPVTI
                     RTLDLGADKADAAGLVLRGEDNPALGVRGVRLSLRYPAVFTTQIRAILRAACYGPVRV
                     LVPMVTQPDELIAVRELFTLARQELKREHVDLPETLPIGAMVEVPAAAINVRALLRHA
                     DFLAIGTNDLAQYVLAADRGNDALDNIYTPLQPALLRLIAYVIASGRRAKKPVSLCGE
                     IGGDTRFTALLIALGLAEFSMHPGLLLQVRDRLATLDGAALRGRSAQLLRAATHEEVS
                     ALLAQWAA"
     gene            complement(1522..1728)
                     /locus_tag="VFM52_05975"
     CDS             complement(1522..1728)
                     /locus_tag="VFM52_05975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8764749.1"
                     /translation="MHAQPAAIARSAPAFLGVLDFRWRRQAGLGWLDAHDVATVSRWG
                     ADVVRAVARATGLPVTLPTAPARR"
     gene            complement(2213..2368)
                     /locus_tag="VFM52_05980"
     CDS             complement(2213..2368)
                     /locus_tag="VFM52_05980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007810099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemin uptake protein HemP"
                     /protein_id="HET8764750.1"
                     /translation="MASPPRPAAGPLARRVTSQALLDGGHELVIQHHGSEYHLRLTRN
                     DKLILTK"
BASE COUNT          370 a          865 c          835 g          301 t
ORIGIN      
        1 tgcgcagcaa gttgcatggc gcgctggcgc gcgaggtcaa cgagttcatc gacgcgcaca
       61 gcctgctgct ggacgacgcc gaactgctgc gcggcctcga cgacctggtg aagattggcc
      121 actaccgcgc cggcgccgca ctgaagaagc agcgcgacaa gctcgccgcg gtgttcgagg
      181 cgatggacga cccctacctg cgcggccgca aggaggacat cgagcaggtg atctcgcggg
      241 tgatctcggc gctgcagcgg cagaccagcg ccgaggaacg caagctcgcg gcgcgcgtcg
      301 gcgagctgct ggtcgcggac accatcgctc cgggcgacat ggcgcagctg gccggcaacg
      361 gcctgctcgg cgtggtcgcc agcggcagca gcgcgtactc gcacagcgcg atcctcgcgc
      421 gcagcctcgg cctgccgatg ctggtcggcg cgcgcgacgc gctgagcatg atccacgacg
      481 acgacttgat cctgctcgac ggcgagcatg ccgaggcgat catccacccg accgcgcagg
      541 atctcgcgcg ctatcgcggc tggcagcgcg aggccgccgc cgaggggcgc cggctcgcca
      601 cgctcgccaa cgccccgacc cgcacccgcg acggcaccac catccacctg ctggccaatg
      661 cggaaaccgt gagcgacgtc gcgctggcgc gggcgcgcgg cgccgacggc gtcggcctgt
      721 accgcaccga attcctgttc ctgaaacaca agcggctgcc gaccgaagaa gaacagttca
      781 ccgcctaccg tgacctcgtg ctcggcatgg gcggccggcc ggtgacgatc cgcacgctcg
      841 acctcggcgc cgacaaggcg gatgccgccg gcctcgtgct gcgcggcgag gacaacccgg
      901 cactcggggt gcgcggcgtg cgcctgtcgc tgcgctaccc ggcggtgttc accacccaga
      961 tccgcgcgat cctgcgcgcc gcctgctacg gcccggtgcg cgtgctggtg ccgatggtca
     1021 cccagccgga cgaattgatc gcggtgcgcg agctgttcac gctggcgcgc caggagttga
     1081 aacgcgagca cgtcgacctg ccggaaaccc tgccgatcgg cgcgatggtc gaagtcccgg
     1141 ccgcggcgat caacgtgcgc gccctgctca ggcacgccga tttcctcgcc atcggcacca
     1201 acgacctggc ccagtacgtg ctcgccgccg atcgcggcaa cgacgcgctg gacaacatct
     1261 acaccccgct gcagccggcc ctgctgcgcc tgatcgccta cgtcatcgct tccggccggc
     1321 gcgcgaagaa gccggtgagc ctgtgcgggg aaatcggcgg cgacacccgt ttcaccgcgc
     1381 tgctgatcgc gctcggactc gccgaattca gcatgcaccc cgggctgttg ctgcaggtgc
     1441 gcgaccgcct cgccacactc gatggcgcgg cgctgcgcgg gcgctcggcg caactgctgc
     1501 gcgccgccac ccacgaagaa gtcagcgcct tgctggcgca gtgggcagcg tgaccggcag
     1561 gcccgtggcg cgtgccaccg cgcgcacgac gtcggcgccc cagcgggata cggtggccac
     1621 atcgtgcgcg tcgagccagc ccagccccgc ctgccggcgc cagcggaaat ccagcacgcc
     1681 gagaaaggcc ggggcggatc gcgcaatggc ggcaggttgt gcgtgcaccc ggcgccaccc
     1741 atgccggtca aggcttccca accgagatag tcggtatccg gcaagagatg gcactgcagg
     1801 ccgaggcgcc cgtcgcggtc gcggcactcg acccactcgt gcggaccatc cgcgtccacc
     1861 cggctgccca ccaccagcca gctcatggcc tgcagtggcg ccagttcggc ccgcgccacc
     1921 agcaaacggg acgccggagc cgccgctgcc gtcgtcgcca atgtcagcac gggcccggcg
     1981 aggggaaggc gggcggcgaa ctcgcatggc gccacgcgca gccagcgccg gtcggcgccg
     2041 acgccggtga acggaagacg ggaacgggtg ccgcgcgcgg ccagccaggc aatcatggca
     2101 atctcctcga gacagcgtgg atggctggcc gggaagtgcg ccgcggctgg ctggggaaca
     2161 acggggcgac gatcgacggg caaggccagg cggcatcacc ctgtgctcgc cgtcatttgg
     2221 tgagtatcag cttgtcgttg cgcgtgagcc gcaagtggta ttcgctgccg tggtgctgga
     2281 tcaccagctc gtggccgccg tcgagcagcg cctggctggt gacgcggcgg gccagcgggc
     2341 cggccgcggg gcgcggcggc gacgccaacc g
//
LOCUS       DASSVL010000341         2298 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1335642,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000341 DASSVL010000000
VERSION     DASSVL010000341.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2298)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2298)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2298
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1335642"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(40..2019)
                     /locus_tag="VFM52_05985"
     CDS             complement(40..2019)
                     /locus_tag="VFM52_05985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007513743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UvrD-helicase domain-containing protein"
                     /protein_id="HET8764751.1"
                     /translation="MLNPQQQAAVEHCDTPLLVLAGAGSGKTSVITQKIAYLIQRRKL
                     AASKIAAITFTNKAAREMRERVAKLVSSEDAAALTVSTFHALGLKFLQIEHARAGLRR
                     GFSVLDADDSEGIVKELAPKGAKPDVLFGLRNLLSRAKNGGLSPQEALAAARSPRELE
                     AATIYELYQARLAAFNAVDFDDLIRLPLRILESDGECRDAWRERLRYLLVDEYQDTND
                     AQYRLLKVLAGERGRLTCVGDDDQSIYAWRGANPENIDRLGRDWPTLRVIKLEQNYRC
                     GKRILRAANALIAHNPHTHEKQLWSEHPEGAPIRVLECKDADQEAEKVAAIAATLVTK
                     YQARWNDIAILYRNNFKARPLEKALRLARVPYHLSGALSFLDRDEVKDILGYLRLLTN
                     PSDDAAFLRVVNKPRREIGDTTKEKLGQHAQARHCSLLEATRSDAVLRQLSPRAATGL
                     AAFSELLDELRSAALHESAAELVERIIRRTGYVAQLVAASPDPAVRERKLGNLNELAD
                     WFRAMQKGASAGDLAAQLALLSHADRDDPGNAVRLMTLHAAKGLEFRFVFIVGCEEGA
                     LPSEGAMDEGRLDEERRLMYVGITRAKELLTLSWAARTRHYGEIVANQPSRFLQELPA
                     ADLHWQGKDPEADRETTRETAESHMAKIAAMLAGK"
BASE COUNT          280 a          748 c          851 g          419 t
ORIGIN      
        1 agcaccgccc gcaagcgggc tcctacaacg tcggtccgcc tatttgccgg ccaacatggc
       61 cgcgatcttc gccatgtgcg attcggcggt ctcgcgtgtg gtctcgcggt cggcctcggg
      121 gtccttgccc tgccagtgca ggtccgcggc cggcagctcc tgcaggaagc ggctgggctg
      181 gttggcgacg atctcgccgt agtgccgggt cctggccgcc cacgacagcg tgagcagctc
      241 cttggcgcgg gtgatgccga cgtacatcag gcggcgttcc tcgtccagcc ggccttcgtc
      301 cattgcgccc tcgctgggca aggcgccttc ctcgcagccg acgatgaaca cgaagcggaa
      361 ttcgaggccc ttggcggcgt gcagcgtcat cagccgcacc gcgttgccgg ggtcgtcgcg
      421 gtcggcgtgc gacagcagcg cgagctgcgc ggcgaggtcg ccggcgctgg cgcctttctg
      481 catggcgcgg aaccagtcgg ccagctcgtt caagttgccg agcttgcgct cgcgcaccgc
      541 cgggtcgggg ctggcggcga ccaactgtgc cacgtagccg gtgcggcgga tgatgcgctc
      601 gaccagttcg gccgcgcttt catgcagcgc cgcgctgcgc agctcgtcca gcagttcgga
      661 aaacgccgcg agcccggtcg ccgcgcgcgg gctgagctgg cgcagcacgg cgtcgctgcg
      721 cgtggcttcc agcagcgagc agtgccgcgc ctgcgcatgc tggccgagct tttccttggt
      781 ggtgtcgccg atctccctcc gcggcttgtt gaccacgcgc aggaaggcgg cgtcgtcgct
      841 ggggttggtc agcaaccgca ggtagccgag gatgtccttc acctcgtcgc ggtcgaggaa
      901 cgacagcgcg ccggagaggt gatacggcac gcgcgccagc cgcagggctt tttccagcgg
      961 gcgcgccttg aagttgttgc ggtagaggat ggcgatgtcg ttccagcgcg cctggtactt
     1021 ggtgaccagg gtggcggcga tcgcggcgac tttttccgcc tcctggtcgg cgtccttgca
     1081 ttcgagcacg cggatcggcg cgccttccgg gtgctcgctc cacagctgct tttcgtgggt
     1141 gtgcgggttg tgcgcaatca gcgcgttggc cgcgcgcagg atgcgcttgc cgcagcggta
     1201 gttctgttcg agcttgatca cgcgcagggt cggccagtcg cggccgaggc ggtcgatgtt
     1261 ctcggggttg gcgccgcgcc aggcgtagat cgactggtcg tcgtcgccga cgcaggtgag
     1321 gcggccgcgc tcgccggcca gcactttcag caggcggtat tgcgcgtcgt tggtgtcctg
     1381 gtactcgtcc accagcaggt agcgcaggcg ctcgcgccag gcgtcgcggc attcgccatc
     1441 cgattccagg atgcgcagcg gcagccggat caggtcgtcg aaatccaccg cgttgaacgc
     1501 ggccaggcgc gcctggtaca gctcgtagat ggtcgccgcc tccagctcgc gcgggctgcg
     1561 cgcggcggcc agcgcttcct gcggcgacag cccgccgttc ttcgcgcggc tgagcaggtt
     1621 gcgcaggccg aacagcacgt cgggcttggc gcctttcggc gccagttcct tcacgatgcc
     1681 ctcgctgtcg tccgcgtcca gcaccgagaa accgcggcgc aacccggcgc gcgcgtgctc
     1741 gatctgcagg aacttcagcc ccagcgcgtg gaatgtgctc accgtgagcg cggccgcatc
     1801 ctcgctcgac accagcttgg ccacgcgctc gcgcatctcg cgcgcggcct tgttggtgaa
     1861 ggtgatcgcg gcgatcttcg aggcggcgag ctttcgccgc tggatcaggt acgcgatctt
     1921 ctgcgtgatg acgctggtct tgcccgaacc ggcgcctgcc agcaccagca gcggggtgtc
     1981 gcagtgttcg acggcggcct gttgttgcgg gttgagcatg gagcggggcg ggcgaggggc
     2041 aggcggggat ggtagcagag ggggctggcg ggcccgggcg gcggctgcac gggatttcca
     2101 ggcggattgc gcaaggatcg accggtgcgg tggagcgtgc ggcgagcgtt ttcgttccgc
     2161 ccgtggccgc ggccgggcag gtgccggcgg ctacagttgt cggcgccgct gccgacagga
     2221 tagggggtgt tccagggcgg gcgcgtggtg tggcggccct gctgtcaggt ggttttcccg
     2281 tttggaagct ttcgtttc
//
LOCUS       DASSVL010000342         2773 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_643586, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000342 DASSVL010000000
VERSION     DASSVL010000342.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2773)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2773)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2773
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_643586"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1677)
                     /locus_tag="VFM52_05990"
     CDS             complement(<1..1677)
                     /locus_tag="VFM52_05990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015447529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HET8764752.1"
                     /translation="MITFRHFALRRGSRLLLSDVDLVIQAGWRLGVIGRNGCGKSSLF
                     AALMGQVEADTGAVDLPAKLRWAAVAQETPALPEAAIDYVLGGDAELAAALRDEAEAT
                     ARDDAPAMARAHHRIEELHGYDGRARAGRLLHGLGFAADMHERAVREFSGGWRVRLNL
                     ARALMAPSELLLLDEPTNHLDLDAVLWLEEWLRRYQGTLLIISHDREFLDGVIDHTLH
                     LEGGGVKLYTGNYSAFEHLRAEQLRQQQIAHEREQAERAHLQSFIDRFKAKATKAKQA
                     QSRMKRLEKLAGTEAVRAERAFHFQFAQPERVPDSMLQLEDVAAGYPADAEPAVILSD
                     VRFSIEAGDRIGLLGPNGAGKSTLVKTLVGDLAPLAGARTAHKDLRIGYFAQHTVENL
                     REHSSPIDHLREQAPGAADQALRDFLGSWNFTGDRAFEPVDGFSGGERARLALALIAW
                     TQPNLLVLDEPTNHLDLDMREALADALADFDGALVLVAHDRHLLGLVCDNFWRVANGK
                     VETFDGDLDDYARWLHAHNGAAKRGEEKGEAVTVSAADRRRAAAAQRDAER"
     gene            1811..2158
                     /locus_tag="VFM52_05995"
     CDS             1811..2158
                     /locus_tag="VFM52_05995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008212020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8764753.1"
                     /translation="MFTHRYSLPLLAAFAIGLGGYAGMPVAHADNLLLHRVQQEKTMS
                     LPTRGMTAAQVERRYGAPVRKLAPRGGDSKRHPVINRWEYANFIVYFEHDHVIHSVLN
                     TPAGNNTHPASAN"
     gene            2257..>2773
                     /locus_tag="VFM52_06000"
     CDS             2257..>2773
                     /locus_tag="VFM52_06000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008436424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="agmatine deiminase family protein"
                     /protein_id="HET8764754.1"
                     /translation="MTEPRWRLPAEWEPQSAVLIAWPHAGTDWAARLAEVETTYTALA
                     AAVTRFQPLVVVVADAAVRGRAEACMRDVAGDLARVRFVELPYDDTWLRDSGPITLAA
                     GDGRFQLADFRFTGWGGKFGAERDDALIAGLVRAGLFHNAMHTRIDWALEGGGIESDG
                     AGNILTTWKCLH"
BASE COUNT          410 a          976 c          961 g          426 t
ORIGIN      
        1 gcgctcggca tcgcgctggg ccgcggcggc gcgccggcga tcggcggcgg atacggtcac
       61 cgcctcgcct ttttcctcac cgcgcttggc cgcaccgttg tgcgcatgca gccagcgcgc
      121 gtagtcgtcg aggtcgccgt cgaaggtctc gaccttgcca tttgcgacgc gccagaagtt
      181 gtcgcatacc agcccgagca gatggcggtc gtgcgcgacc agcaccagcg cgccgtcgaa
      241 atcggcgagc gcatcggcca gcgcctcgcg catgtcgaga tccaggtggt tggtcggctc
      301 gtcgagcacc agcaggttcg gctgggtcca cgcgatcagc gccagcgcga ggcgcgcgcg
      361 ttcgccgccg gaaaagccgt cgaccggctc gaacgcgcgg tcgccggtga agttccagct
      421 gccgaggaaa tcccgcagcg cctggtcggc cgcgcctggc gcctgttcgc gcaggtggtc
      481 gatcgggctc gaatgctcgc gcaggttctc gaccgtgtgc tgggcgaaat agccgatacg
      541 cagatccttg tgcgcggtgc gcgcgccagc cagcggcgcg aggtcgccga ccagcgtctt
      601 gaccagcgtg gacttgcccg cgccgttggg gccgagcagg ccgatgcggt cgccggcctc
      661 gatggaaaac cgcacgtcgg acaggatgac cgcaggctcc gcgtccgctg ggtagcccgc
      721 cgccacgtct tccagctgca gcatcgagtc cggtacccgc tccggctgcg caaactggaa
      781 atggaacgcg cgctcggcgc gcacggcctc ggtgccggcg agtttctcca gccgcttcat
      841 gcgcgactgc gcctgcttgg ccttggtcgc cttcgccttg aagcggtcga tgaaactctg
      901 caggtgcgcg cgctcggcct gttcgcgctc gtgcgcgatc tgctgctggc gcagttgctc
      961 ggcgcgcagg tgctcgaacg cgctgtagtt gccggtgtac agcttcacgc cgccgccttc
     1021 gagatgcagc gtgtggtcga tcacgccgtc gaggaattcg cggtcgtggg aaatgatgag
     1081 caaggtgccc tggtagcgcc gcagccactc ttcgagccac agcacggcgt cgagatcgag
     1141 atggttggtg ggctcgtcca gcagcagcaa ttcggaaggc gccatcagcg cgcgggcgag
     1201 gttcaggcgc acgcgccagc cgccggaaaa ctcgcgcacc gcgcgctcgt gcatgtcggc
     1261 cgcgaagccc aggccgtgca gcaggcggcc ggcgcgcgcg cggccgtcgt agccgtgcag
     1321 ctcctcgatg cggtgatgcg cgcgcgccat cgccggcgcg tcgtcgcgcg ccgtggcttc
     1381 ggcctcgtcg cgcagcgccg cggccagctc ggcatcgccg cccagcacgt agtcgatcgc
     1441 cgcctccggc aacgcggggg tttcctgcgc caccgccgcc cagcgcaatt tcgccggcag
     1501 gtcgaccgcg cccgtatcgg cttcgacctg gcccatcaag gccgcgaaca ggctcgactt
     1561 gccgcagccg ttgcggccga tcacgcccag tcgccagccg gcctggatga cgaggtcgac
     1621 gtcggacagc agcaggcggc tgccgcgacg caaggcgaag tggcggaacg tgatcatcgg
     1681 gcttggggca gtatcgacac ggccggccat gataatggct atgccggtca cacccgttgc
     1741 ggcgtggcat ggattgcccg cggcagttct gttaaaacgg cgcggcaccg cccagtcggg
     1801 agaggggatc atgttcacgc accgctacag cctgcccttg ctggcagcgt tcgccatcgg
     1861 cctcggcggc tacgccggca tgccggtcgc ccatgccgac aacctgctgc tgcatcgcgt
     1921 gcagcaggaa aaaaccatga gcctgccgac gcgcggcatg accgccgcac aggtcgagcg
     1981 ccgctacggc gcaccggtgc gcaagctcgc gccgcgcggt ggggacagca agcggcatcc
     2041 ggtcatcaac cgctgggagt acgcgaactt catcgtgtac ttcgagcacg accacgtgat
     2101 ccactccgtg ctcaacacgc cggccggcaa caacacccac ccggcgtccg ccaactgacc
     2161 gagatactcg acatgacgcg gtctgcggcg gcgcgggccg cgttttcgtg tgcgcgccgg
     2221 tagacttgcg gactgccatc cccgcgagtg caaaccatga ccgaaccccg ctggcgcctg
     2281 cccgccgaat gggagccgca atccgcggtg ctgatcgcct ggccgcatgc cggcaccgat
     2341 tgggccgcgc gcctcgccga ggtggaaacc acgtacaccg ccctggccgc ggcggtcacc
     2401 cgtttccagc cgctggtcgt cgtggtggcc gacgccgccg tgcgcgggcg ggcggaggcc
     2461 tgcatgcgcg atgtggccgg cgacctggcg cgcgtgcgct tcgtcgagct gccgtacgac
     2521 gacacctggc tgcgcgattc cggcccaatc acgctggctg ccggcgacgg ccgtttccag
     2581 ctcgcggatt tccgcttcac cggctggggc ggcaagttcg gcgccgagcg cgacgacgcg
     2641 ctgatcgccg gactggtgcg cgccggcctg ttccataatg cgatgcatac gcggatcgac
     2701 tgggcgctcg aaggcggcgg catcgagagc gatggcgcag gcaacatcct caccacgtgg
     2761 aagtgcctgc acc
//
LOCUS       DASSVL010000343         2073 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_163454, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000343 DASSVL010000000
VERSION     DASSVL010000343.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2073)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2073)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2073
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_163454"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..736
                     /locus_tag="VFM52_06005"
     CDS             <1..736
                     /locus_tag="VFM52_06005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HET8764755.1"
                     /translation="SKLDFTLGYYRINLDQAIQAPDAQTQLNRCVASGSLTSDACGGI
                     HRNATGNIDSFANELQNLGTIHTDGYDFTVAWRGPQTDIGQFHATWSNTYVDQYTARD
                     ASGQIEPRTVGIEVNDSAIPRLASNLNLGWTRGAWMVDYTMRYRSGLKENCAGAAGFP
                     ICNHPDEITPNRPDGTHDLSAVSYSDLRASWKVPVALDLTLTAGINNLFNKAPPVCVS
                     CSLNGYDASTYDLPSRFTYLQANVKF"
     gene            874..2031
                     /locus_tag="VFM52_06010"
     CDS             874..2031
                     /locus_tag="VFM52_06010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007511919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isovaleryl-CoA dehydrogenase"
                     /protein_id="HET8764756.1"
                     /translation="MRPFPLGEEIDLLRDTVHAFAQKEIAPRAARIDRDNHFPADLWR
                     KFGALGLLGMTIPAEYGGTGMGYLAHMVAMEEISRASGSVGLSYGAHSNLCMANLCKN
                     GNEAQRRKYLPRLCSGEYVGALAMSEPGAGSDVVGSMACHAELHGDRWVANGNKMWIT
                     NGPDADVLLVYMRTAPKSAGSHGMTAFIVEKGMPGFSTAQKLDKLGMRGSNTCELVFE
                     NCEIPAENVLGDVNEGVCVLMSGLDTERLVLSGGPIGLMQAALDITLPYVRERKQFGT
                     AIGTFGIMQAKVADMYTALQSSRAFAYMVARGFDAGEHSRVDPAACLLNASRNAVAVT
                     LDAIQSLGGNGYINDYDTGRLLRDAKLYEIGAGTNEIRRMLIGRELFKGNA"
BASE COUNT          376 a          756 c          640 g          301 t
ORIGIN      
        1 gtccaagctg gacttcacgc tcggctacta ccggatcaat ctcgaccagg cgatccaggc
       61 acccgatgcg cagacccagc tcaaccgctg cgtcgccagc ggcagcctga cctccgacgc
      121 ctgcggcggc atccaccgca acgccaccgg caacatcgac agcttcgcga acgagctgca
      181 gaacctcggc acgatccaca ccgacggcta cgacttcacc gtcgcgtggc gcggtccgca
      241 gaccgacatc ggccagttcc acgccacctg gagcaacacc tatgtcgacc agtacaccgc
      301 gcgcgacgcc tccggccaga tcgagccgcg caccgtgggc atcgaggtga acgacagcgc
      361 gattccgcgc ctggcctcca acctcaacct cggctggaca cgcggcgcct ggatggtgga
      421 ctacaccatg cgctaccgca gcggcctcaa ggaaaactgc gcgggcgccg ccggcttccc
      481 gatctgcaac cacccggacg agatcacgcc gaaccggccg gacggcacgc acgacctcag
      541 tgcggtcagc tacagcgacc tccgcgccag ctggaaggtg cccgtcgcac tggacctcac
      601 gctcaccgcg ggcatcaaca acctgttcaa caaggcgccg ccggtgtgcg tgtcgtgctc
      661 gctgaacggc tacgacgcct ccacctacga cctgcccagc cgcttcacct acctgcaggc
      721 caacgtgaag ttctgaccac cgtcgcatcc gctgcacgca ggggccgccg caaggcggcc
      781 cttgtcgttc ccggctggtg cgccgcgtca gcggcaagcc accgacgtgc attaccatct
      841 gccggctaaa tccccacgat caggagttgc gtgatgcgcc cgtttccgct cggcgaagag
      901 atcgacctgc tgcgcgacac cgtgcacgcg tttgcgcaaa aggagatcgc gccgcgcgcc
      961 gcgcggatcg accgcgacaa ccacttcccg gcggacctgt ggcggaaatt cggggcactt
     1021 ggcctgctcg gcatgacgat accggccgaa tacggcggca ccggcatggg ctacctcgcg
     1081 cacatggtgg cgatggagga gatctcgcgc gcctccggct cggtcggcct gtcctacggc
     1141 gcgcactcca acctgtgcat ggcgaacctg tgcaagaacg gcaacgaggc acagcgccgc
     1201 aagtacctgc ccagactgtg cagcggcgag tacgtcggtg cgctggcgat gagcgaaccc
     1261 ggcgccggtt ccgacgtggt cggctcgatg gcctgccatg ccgagctgca cggcgaccgc
     1321 tgggtcgcga acggcaacaa gatgtggatc accaacggcc cggatgccga cgtgctgctg
     1381 gtctacatgc gcaccgcgcc gaagtcggcc ggcagccatg gcatgaccgc gttcatcgtg
     1441 gaaaagggca tgccaggatt ttccaccgcg cagaagctcg acaagctcgg catgcgcggc
     1501 tccaacacct gcgagctggt gttcgagaac tgcgagatcc ccgccgaaaa cgtgcttggc
     1561 gacgtgaacg agggcgtgtg cgtgctgatg agcgggctgg acaccgaacg cctcgtgctt
     1621 tccggcggcc cgatcggcct gatgcaggcc gcgctcgaca tcaccctgcc ctacgtgcgc
     1681 gagcgcaagc agttcggcac cgcgatcggc accttcggca tcatgcaggc gaaggtcgcc
     1741 gacatgtaca ccgcgctgca atcctcgcgc gccttcgcct acatggtcgc gcgcgggttc
     1801 gatgccggcg agcattcgcg cgtcgatccg gccgcctgcc tgctcaacgc ctcgcgcaac
     1861 gccgttgccg tcacgctcga tgccatccag tcactcggcg gcaacggcta catcaacgac
     1921 tacgacaccg gccgcctgct gcgcgacgcc aagctgtacg agatcggcgc cggcaccaac
     1981 gagatccgcc gcatgctgat cgggcgcgag ctgttcaagg gcaacgcctg aggtcgcagg
     2041 aaccggcccg gccgggccgc gctgtcccgt ctc
//
LOCUS       DASSVL010000344         2754 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_488332, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000344 DASSVL010000000
VERSION     DASSVL010000344.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2754)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2754)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2754
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_488332"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(17..487)
                     /locus_tag="VFM52_06015"
                     /pseudo
     CDS             complement(17..487)
                     /locus_tag="VFM52_06015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014402698.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
     gene            complement(534..2579)
                     /locus_tag="VFM52_06020"
                     /pseudo
     CDS             complement(534..2579)
                     /locus_tag="VFM52_06020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015448637.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3418 domain-containing protein"
BASE COUNT          375 a          959 c          990 g          430 t
ORIGIN      
        1 aggaacatca gccgcacgtg ttgcgctcgt gcggcgccag ccggccgtaa tcgacgaaca
       61 gctcggcgat cgcgtggttc cagatcagga tgtcgaagcg gctgttgcgc acgtaggcgg
      121 gcagcgggtc cagcgcctgc acgaactggc gcaggccgtc ggtcagcgac tcgtcgtggg
      181 tgtcctccgg cggcgcgtgg ccggagaggg cgaacacata ggcgcgctcg gcgtcgctca
      241 tgcgcagtac ctgcgccagc cgttccagcg cctcgggcga ggcgcgcacg tcgcggccct
      301 gctcgatcca tgtgtaccag ctcgcgctga cgtcagcggc catcgccacc tcttcgcgct
      361 tcaggcccgg cgtgcggcgg cggccgatgg cgaagcccag tgcggccggt gacacgcgtg
      421 cgcggcaggc caccaggaac gcgccgagtt ccttgcgctg cgccgcgtcg tgcgtgctgg
      481 cattcatcgt cgtggccgcc tcatgggatg ccccgcatga tagcgagcgc ggctcagagg
      541 gcttccagcg ccttcgccag ccgcttggcc gacaccggct cggcggtctt cagctcctgc
      601 gcgaacagcg acacgcgcca ttcctcgatc agccagcgca gctcgtcgag gttgccgtcg
      661 ccggcggcgt ggtgcttgag gtacgcgcgc cagtagggca gcacctgcag catgcgctgc
      721 tggtccttcg ccgggtcctg ctgcaggcgt tcggcgcgca ggcgcatcgc cttgaggtag
      781 cgcgggaaat gcgcaaggcg cgcgcccggc agctcgcgca ggaaaccagg cgtgagcagc
      841 gcatccagct gttcgtgcag gtcgtcgtag ctggcgcgcg caaagccgag caggggcggc
      901 tgcagccagg ggcgcagttc ggcctgggct tcgatgatcg gctcggcgag tttcaggcgt
      961 tcgatcgcgc aggcaaacag ttcgcgcgcg gcgcgcaggt gcagcgtggt gaacgcgccg
     1021 gcgctgcgca cgtccagctc cagcgtgccg acgaggtcgg cgaggccgcc ttcgaccagg
     1081 tcctcgcgca ggctctcggc gctgcccagc ggcgtgtatt ccagcgcgag cgggttgccg
     1141 atcggcagcc ggcggcgggc ctgcttgagg tcggtggcca atgcgtggcg cagcagacgc
     1201 agcacgcctt tcgcgtgtgc ggccgccgcc tcgtcggcgc gctcgaacac gcgcagcgcc
     1261 acggcatcgc ccaggtcgac cagcgcgggc cacgcggcga ggcctccggc cgaacgcacc
     1321 tcgtgcggaa tctcctcgaa atcccagctg gtgacgtcct cgcgcgtgag ttcgatatcg
     1381 gtcttgcgcg agaacgccgc ccgcgcctgg ttttcccagg tggcgcgcag cgcggcaagg
     1441 tcgcgcccgg ttgccagcgt atggccgtgc tcgtcgtgca cgcgaaagcg catgcggtaa
     1501 tgcggcgcca actcgatgcc gctgaatgcc gtcgccgcca gttcgacgcc ggtggcccgc
     1561 gtgaggaacg ccgcaagcgc cggggccaat ggcgcgtcgc gcgccgcctc ggcttcggta
     1621 aacgcgcgcg cgaaatccgg cgccggcacg aagttgcggc gcagcgcctt gggcaggccg
     1681 cggatcaact cggcgacttt ctccgcgagc aggccgggca ccagccattc gcagcgcgcg
     1741 gcaggcagtg cgttgagcat cgccagcggc aggtgcaggg tgacgccatc ggcctcgtcg
     1801 ccgggcacga agcggtattc gaggcgataa cgctgcgccg cagtcggcgc cttgccggtg
     1861 ctggccggcg cgatctccag tacggctggg aaggcttttg gatcgagccc ggcgccgccg
     1921 gccatcacgt cctccagcga ccagcgcagc gccgcctgtt ccgccgggcg cgcacggcga
     1981 taccacgcgt ccagcgcgcg gctgctgttg atctcctctg gcagcttgcc gcggaagaaa
     2041 tcgaccaggt cgtcctcgtc gcgcaccagc ccttcccggc gctggcgcgc ctcgatgccg
     2101 tgcgcgtctt ccagcacgcg ggcattggcg cggatgaaat cggcgcgggc gtcgaggtcg
     2161 ccgcgcacca gcgcctcgcg caggaaaatc tcgtgcgcca gcggcgggtc ctgcttgtcg
     2221 aaggtgatcg gccggcgctc gaccagggtc agcccgaaca ggctcacctg ctcgtaggcg
     2281 gtgacgcagc cgcgcttctt cgaccagtgc ggatcgcgga cggcggcctt caccaggtgc
     2341 gcggcctgct cctcgatcca tgccggttcc acccgggcgc acatcattgc ccacaccttg
     2401 ccgccgatgt cgagaatctg cgcggcaaac acccagttcg gcggcgcctt caccagtgcg
     2461 gaaccgggaa agacctggaa cttgcgctcg cgcgggccct ggtagatgcc gcgctcgtcc
     2521 ttgcggccga cctgggtcgg caggccggcg agaaggctgc gatggatggt ctcgtggagg
     2581 agggaggcgg cggcttcatc tgagccgggt ttgccgtttc tcccctctgg ggatgtgcgt
     2641 tcgctccctc ttctctctgg ggtgaggggc aagggcttgc ggggatgttc gtgcgcaggg
     2701 tgtttgctgc cgtgcgctgc gcgcgaggca gaagcccccc ccccccccgc cccc
//
LOCUS       DASSVL010000345         2504 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_516490, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000345 DASSVL010000000
VERSION     DASSVL010000345.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2504)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2504)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2504
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_516490"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2504
                     /gene="dnaE"
                     /locus_tag="VFM52_06025"
     CDS             <1..>2504
                     /gene="dnaE"
                     /locus_tag="VFM52_06025"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019464659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0008408 - 3'-5' exonuclease activity
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="DNA polymerase III subunit alpha"
                     /protein_id="HET8764757.1"
                     /translation="WVATPDDPRPWRLTLLCQHHEGYLNLMRLVSRVWQQGQQGGRAL
                     ARAEWLTPAATEGLIALLGRESEVARTVLVKGHAEALARLRPLARLFPDRLYLELTRC
                     SRENEEAWNQAALALATDLDLPVVASNDVRFLTRADFEAHEARVCIHQGRVLADPKRP
                     HDYSPEQYLKTPEEMAELFADLPEALENTVELAKRCNLELKFGTYYLPDFPVPEGYNL
                     DTHIAELARKGLKERLAVNPLAKGHTRQDYEDRLERELGVIIKMGFPGYFLIVADFIN
                     WSKQHDIPVGPGRGSGAGSLVAWCLRITELDPLEFDLLFERFLNPERVSMPDFDVDFC
                     MDRRDEVIDYVARKYGRDHVSQIITYGSMAAKAVLRDSGRVLGMGYGAVDKIAKLIPP
                     RPLDLTLSDALGRTEKSQKEPERVVREFCELYETDLDEARPLIDLALKLENLTRNVGK
                     HAGGVVIGPKPLTEFAPLYCEPGGGGVVTQYDKDDVEAVGLVKFDFLGLRTLTIIDWA
                     VKAINARRAKTGEAPLDISALPLDDPKSYELLKKAQTVAVFQLESSGMQRMLKDAKPD
                     RFGDIVALVALYRPGPMDLIPSFIARKHGREEVDYPDPRVEPILKETYGIMVYQEQVM
                     QMAQIVGGYTLGGADLLRRAMGKKKVEEMVKHRAIFREGAAKDGLSGDKADAIFDLME
                     KFAGYGFNKSHAAAYALVSYQTAYFKAHHPAAFMAANLSLVMDDTDKVKSLYDDTLAQ
                     KIAILPPDVNASGYRFEPVDTRSIRFGLGAVKGTGQAAIEAIVAARNEGGPFRDLFDF
                     ARRVDKRLVNRRVVEALVRGGAFDAVDARRATLLAS"
BASE COUNT          445 a          856 c          833 g          370 t
ORIGIN      
        1 gtgggtggca acgccggatg acccgcgccc ctggcggctg acactgctgt gccagcacca
       61 cgagggttac ctgaacctga tgcgcctggt gtcgcgcgtg tggcagcaag gccagcaggg
      121 cgggcgcgca ctggcccgcg cggagtggct caccccggcc gccaccgagg gcttgatcgc
      181 cctgctcgga cgcgagagcg aggtggcgcg cacggtactg gtgaaaggcc atgccgaggc
      241 gctcgcacgc ctgcgcccac tggcccggct gttccccgat cgcctgtacc tcgaactcac
      301 ccgctgcagc cgcgagaacg aggaagcgtg gaaccaggcg gcgctcgcgc tggccaccga
      361 cctcgacttg ccggtggtgg cctcgaacga cgtgcgcttc ctgacccgtg ccgatttcga
      421 ggcgcacgaa gcgcgagtgt gcatccacca gggtcgcgtg ctggccgacc ccaagcgccc
      481 gcacgactac agccccgagc agtacctgaa gaccccggag gaaatggcgg agctgttcgc
      541 cgacctgccc gaggcgctgg aaaacaccgt cgagctggcg aagcgctgca acctggagct
      601 gaagttcggc acctactacc tgccggattt cccggtgccc gagggctaca acctcgatac
      661 ccacattgcc gagctggcgc gcaagggcct gaaggaacgg cttgcggtca acccgctggc
      721 gaaaggccac acccggcagg attacgaaga ccgcctcgaa cgcgagctcg gcgtgatcat
      781 caagatgggg tttcccggct acttcctgat cgtggccgac ttcatcaact ggagcaaaca
      841 gcacgacatc ccggtcgggc cgggccgcgg ttcgggcgcg ggttcgctgg tggcgtggtg
      901 cctgcgcatc accgagctcg acccgctcga attcgacctg ctgttcgagc gctttctgaa
      961 ccccgaacgc gtgtcgatgc ccgacttcga cgtcgacttc tgcatggatc gccgcgacga
     1021 ggtgatcgac tatgtggcgc gcaagtacgg ccgcgaccac gtcagccaga tcatcaccta
     1081 cggctcgatg gcggcgaagg cggtgctgcg cgattccggc cgcgtgctcg gcatgggcta
     1141 cggcgcggtg gacaagatcg ccaagctgat cccgccgcgc ccgctggatc tcaccctctc
     1201 cgacgcgctg ggccgtaccg agaaatcgca gaaagagccc gagcgcgtcg tcagggaatt
     1261 ctgcgagctc tacgaaaccg acctggacga agcgcgcccg ctgatcgacc tcgcgctcaa
     1321 gctggaaaac ctcacccgca acgtgggcaa gcacgccggc ggcgtggtga tcgggcccaa
     1381 gccgctcacc gaattcgcgc cgctgtactg cgaaccgggc ggcggcggcg tggtcaccca
     1441 gtacgacaag gacgacgtcg aggcggtcgg cctggtgaag ttcgacttcc tcggcctgcg
     1501 cacgctgacc atcatcgact gggcggtgaa ggcgatcaac gcgcgtcgcg cgaaaaccgg
     1561 cgaggcgccg ctggacatct cggcactgcc gctggacgac cccaagtcct acgaactgct
     1621 gaagaaggcg cagaccgtcg cggtgttcca gctcgaatcc tccggcatgc agcgcatgct
     1681 gaaggatgcc aagcccgacc gtttcggcga catcgtggcg ctggtggcgc tgtaccgccc
     1741 cggcccgatg gacctgatcc ccagcttcat cgcgcgcaag cacggccgcg aggaagtgga
     1801 ctaccccgat ccgcgcgtcg agccgatcct gaaagagacc tacggcatca tggtctacca
     1861 ggagcaggtg atgcagatgg cgcagatcgt gggcggctac acgctcggcg gcgccgacct
     1921 gctgcgccgc gcgatgggca agaagaaagt cgaggagatg gtcaagcacc gcgcgatctt
     1981 ccgcgagggc gcggccaagg acgggctgtc cggcgacaag gccgacgcga tcttcgacct
     2041 gatggagaaa ttcgccggct acggcttcaa caagtcgcac gccgccgcct acgcgctggt
     2101 gtcctaccag accgcgtatt tcaaggcgca tcatcccgcg gcgttcatgg cggcgaacct
     2161 gtcgctcgtc atggacgaca ccgacaaggt gaagagcctg tacgacgaca cgctcgcgca
     2221 gaagatcgcc atcctgccgc cggacgtcaa cgcgtcgggc tatcgcttcg agccggtcga
     2281 cacccggagc atccgcttcg ggctcggcgc agtgaagggc accgggcagg cggccatcga
     2341 ggcgatcgtc gcggcgcgga acgaaggcgg gcccttccgc gacctgttcg acttcgcccg
     2401 gcgcgtcgac aagcgcctgg tcaatcgccg cgtcgtcgag gcgctggtgc gcggcggcgc
     2461 cttcgacgcg gtcgatgcgc gccgcgccac cctgctcgcc tccg
//
LOCUS       DASSVL010000346         2196 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_954553, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000346 DASSVL010000000
VERSION     DASSVL010000346.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2196)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2196)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2196
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_954553"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..375
                     /locus_tag="VFM52_06030"
     CDS             <1..375
                     /locus_tag="VFM52_06030"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HET8764758.1"
                     /translation="DPALLERIVDNLMLSAREYAPAGARIEVELARSQGQWLLRIGNP
                     APDLAEADLPHLGQRFWRKSPAREATRHGGLGLALATTLAAVLAMVLRFELRDGVLWA
                     ILGPLPDIGSINTRPTRDAAGR"
     gene            682..1710
                     /locus_tag="VFM52_06035"
     CDS             682..1710
                     /locus_tag="VFM52_06035"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HET8764759.1"
                     /translation="MRRWVVGFGLASLVVHVAWAAEPAVGVPTARVERVERIPLERLP
                     ATVRLPLEGTSVVVVPLAGSVLEVLVREGDAVKRGQALARLQSREAMTLGADLAAAQG
                     AYGVAAAQAKRDEQLVQEGIVPRARLQASIASRDAAAARVRELQAARAWAPAAGGSGM
                     GVYELRAPMAGRVVERAVQPGGTYDALAKAFVVTAGQRVMLELRVPASTAGQVRRGQE
                     VRTGEGAIAHVSETAGVLDAASQTVLVRAEGDAGALLPGMQTHATLWLPAPPDAVSVP
                     AGAVLGEGDALQVFVRTATGFRAVKVGLLARDGESRRIVRGELKHGDEVATGALDTLR
                     ARTAMEGR"
     gene            1712..>2196
                     /locus_tag="VFM52_06040"
     CDS             1712..>2196
                     /locus_tag="VFM52_06040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012204573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HET8764760.1"
                     /translation="MLQRLIAFSLAQRLLVLVMALGLVAAGVWAFLRLPIDAYPDIAP
                     TQVKLILKAPGMTPEEVESRVVVPLEMELLGVPKAVMLRSTAKYAIADVTLDFQEGTD
                     IYWARQQVAERFAGASAELPSDVSGGLAPMSTPLSDMFMFTIEGGQLSLAERRTLLDW
                     T"
BASE COUNT          290 a          754 c          830 g          322 t
ORIGIN      
        1 gaccccgccc tgctcgagcg catcgtcgac aacctgatgc tcagcgcgcg cgagtacgcg
       61 ccggccgggg cccgcatcga ggtggagctg gccaggtcgc aggggcagtg gctgctgcgc
      121 atcggcaatc cggcgccgga cctggccgag gccgacctgc cgcatctcgg ccagcgtttc
      181 tggcgcaagt cgccggcgcg cgaggcgacg cggcatggcg gcctgggcct ggcgctggcg
      241 accacgctgg cggcggtact cgccatggtg ctgcgtttcg aactgcgtga cggcgtgctc
      301 tgggccattc tagggccgtt gccggacatc ggctcgatca acacccggcc cacccgcgac
      361 gctgcaggca ggtgatccgc cgccggtgag ggcggcgccg ggttccgcac acgcgccgga
      421 agacctgcac gcggccattg gcaacgtgct gccgtggctc gccatcgccc acgcggccgt
      481 cgccgggttc cgccacgtcg tgcaacgcgg cgatgcgctg gcccgcatgc tgcccggcaa
      541 tcgccggcgc gcccgccgag gccgatggca cacgcgtcgc tcggggtgcg gcgtgccgcc
      601 gcagcggtcg gcccgttgcc ttaagcgcgt tcaaagctgg ccattccgat actccccgcc
      661 agtcgatacg ggagatcttg catgcgccgt tgggttgtcg gtttcgggct cgcgtccctg
      721 gtggtccatg tggcatgggc ggccgaaccg gcggtcggcg tgccgacggc gcgggtcgag
      781 cgcgtcgagc gcattccgct ggaacggctg ccggccaccg tgaggctgcc gctggaaggg
      841 acctcggtcg tggtcgtgcc gctggccggc agcgtgctcg aggtgctggt gcgcgaaggc
      901 gatgcggtga agcgcgggca ggcgctggcc aggctgcaaa gccgcgaggc gatgacgctt
      961 ggtgcggacc tggcggccgc gcagggcgcc tacggcgtcg ccgcggccca ggcaaagcgc
     1021 gacgaacaac tggtgcagga aggcatcgtg ccgcgagcgc ggctgcaggc cagcatcgcc
     1081 tcgcgtgacg cggcggcggc gcgcgtccgc gaactccagg cggcacgcgc ctgggcgccc
     1141 gcggcgggcg gatcgggcat gggcgtctat gagctgcggg caccgatggc tggccgcgtg
     1201 gtcgagcgtg ccgtgcagcc cggcggcacg tacgacgccc tggccaaggc cttcgtggtg
     1261 acggcagggc aacgcgtcat gctcgagttg cgggtacccg cttcgacggc cggccaggtg
     1321 cgccggggcc aggaggtgcg gactggcgaa ggggccatcg cccatgtcag cgaaaccgcc
     1381 ggcgtgctcg atgccgccag ccagacggtg ctggtccgcg cggaaggaga cgccggtgcc
     1441 ttgctgcccg gcatgcagac ccacgccacg ctgtggctgc ccgcgccgcc ggatgccgtc
     1501 tcggtgcccg ccggcgccgt gctgggcgaa ggcgatgccc tgcaggtttt cgtgcgcacg
     1561 gccaccgggt tccgcgccgt gaaggtcggc ctgctggcgc gcgatggcga gtcgcggcgc
     1621 atcgtgcgtg gcgagctgaa acacggcgac gaggtcgcca ccggcgcact cgacaccttg
     1681 cgggcgcgca cggccatgga agggcggtga gatgctgcag cgactcatcg cgttttcgct
     1741 ggcgcagcgc ctgctcgtgc tggtcatggc cctgggcctg gtcgcggcgg gcgtgtgggc
     1801 gttcctgcgc ctgccgatcg acgcctaccc agacatcgca cccacccaag tcaagctgat
     1861 cctcaaggca cccggcatga cgccggaaga ggtggaaagc cgcgtggtgg tgccgctgga
     1921 gatggaattg ctgggcgtgc ccaaggccgt gatgctgcgc tcgaccgcca agtacgccat
     1981 tgccgacgtc acgctcgatt tccaggaggg cacggacatc tactgggcgc gccagcaggt
     2041 ggccgagcgt ttcgccggcg cgtcggccga actaccctcc gatgtgagcg gcggactcgc
     2101 gccgatgtcc accccgctgt cggacatgtt catgttcacc atcgagggcg ggcagctttc
     2161 cctggcggag cgccgcaccc tgctggactg gaccat
//
LOCUS       DASSVL010000347         2626 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_389609, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000347 DASSVL010000000
VERSION     DASSVL010000347.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2626)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2626)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2626
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_389609"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..676
                     /locus_tag="VFM52_06045"
     CDS             <1..676
                     /locus_tag="VFM52_06045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017158585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HET8764761.1"
                     /translation="GSGQLPLLMVRAGDLRAAIRIDTVIGSREIVVKPIGPQISNVPG
                     MFGATILGDGSVMLILDLAPLVRHFEAKQAAVAVANDETMAVPEVPAATMRTESEGPR
                     VVMVVDDSITMRKVTTRVLERERLEVITAKDGMDALEKLQERVPDVMLLDIEMPRMDG
                     FELATHMKNDSRFRHVPIIMITSRTGEKHRQRAFEIGVDRYLGKPYSESDLLHNVSEI
                     LGARRA"
     gene            669..1853
                     /locus_tag="VFM52_06050"
     CDS             669..1853
                     /locus_tag="VFM52_06050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8764762.1"
                     /translation="MLDQKIPSRPRVALVFGDAGSARHLRDAVSGCVEIVYEASTAEF
                     DVARLAVSQATAALVNLDDCESLDGVEAGLEETGVAVVFNDPEISSKLDGWAQARWLR
                     HLTAKLSGNSDFDPPRPAAAQTASIVATAAPDAQDPVQAGSAAPPGAEDAPQLVERPL
                     SQAEIESMTADFVAVQEPSAHSMDFDGTAAPLAADAGGTESPTPAIEAPGTETPPPAQ
                     AADATRAAGTEADHADALDVDTEALSAMIDARLAAAEGEPVPESPEVWRVIEGGSVSA
                     VELPPIEPEPLAVAPSSAPPQPATPVDDADVWTALPPLDDWQLVDPEAPAVPASAPKR
                     DEHPGLTIDFGGLELVPMETVARVETGSASIEQWMHAGESVEAAGSAAMKPVVGAKGG
                     QA"
     gene            1850..2332
                     /locus_tag="VFM52_06055"
     CDS             1850..2332
                     /locus_tag="VFM52_06055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019464678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheW"
                     /protein_id="HET8764763.1"
                     /translation="MSAVQALPREIRGVMLPVTGGRVLVPNTTMAEVITYAQPTAVAD
                     APPWLLGRLAWRGWGLPVLAFSVLAGVAEHEPAENTRVAILKALSGHARLPYFGVLCQ
                     GFPRLTLISEATLVLDDASSGGVLAGVREQVRVHDEAAWIPDLGAIEDLVVGALAAAA
                     "
     gene            complement(2350..>2626)
                     /locus_tag="VFM52_06060"
     CDS             complement(2350..>2626)
                     /locus_tag="VFM52_06060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018973959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="RsmE family RNA methyltransferase"
                     /protein_id="HET8764764.1"
                     /translation="SLEACLAAYPQKGAEVRWMLHPGGNARLRHLASTPADVTLAVGP
                     EGGFSDKDVAALHRAGFDALALGPRILRTETAGLAAMAALQAVCGDF"
BASE COUNT          425 a          852 c          915 g          434 t
ORIGIN      
        1 aggctccggg cagttgccgc tgctgatggt gcgtgctggt gacctgcgcg ccgccatccg
       61 cattgatacg gtgatcggtt cgcgcgaaat cgtggtgaag ccgatcggtc cgcagatcag
      121 caacgtgccc ggcatgttcg gcgccaccat cctgggcgac ggctcggtga tgctcatcct
      181 cgatctcgca cctctcgtgc gccatttcga ggccaagcag gcggcggtcg cggttgcgaa
      241 cgacgaaacc atggcggtgc ccgaagtacc ggcggcgacc atgcgcacgg aatcggaggg
      301 tccacgcgtc gtgatggtgg tggacgattc gatcacgatg cgcaaggtga cgacccgcgt
      361 gctcgaacgc gagcggctgg aggtcatcac cgcgaaggac ggcatggatg cactcgagaa
      421 attgcaggaa cgcgtacccg acgtgatgtt gctcgacatc gaaatgccgc gcatggacgg
      481 tttcgaactg gccacccaca tgaagaacga ttcgcgcttc cgccatgttc cgatcatcat
      541 gatcacctcg cgtacgggcg agaaacatcg ccagcgtgcg ttcgagatcg gcgtcgaccg
      601 ctacctcggc aagccttaca gcgagtcgga cctgttgcac aacgtcagcg agatcctggg
      661 ggcccgccgt gcttgaccag aagattccgt ctcggccgcg cgtggcgctg gtgttcggcg
      721 atgcaggttc tgcacggcat ctgcgcgacg cggtgtccgg ttgcgtggag atcgtctacg
      781 aagcctccac cgcggaattc gacgtagcgc gccttgccgt ctcgcaggca accgctgcgc
      841 tggtgaatct cgatgattgc gagtcgctgg atggtgtgga agcagggctg gaggagaccg
      901 gcgtcgcggt ggttttcaat gatcccgaga tttccagcaa gctcgacggc tgggcacagg
      961 cgcgctggtt gcgccatctg accgccaagc tgagcggcaa cagtgatttc gatccgccgc
     1021 ggccggcggc cgcgcagacg gcgtcgatcg tcgccacggc cgcgccggac gcacaagatc
     1081 cggtgcaagc aggatcggcc gccccgcccg gcgcggagga cgcgccgcag ctcgtggaac
     1141 ggcccctgtc gcaggcagaa atcgaatcga tgacggcgga cttcgtggcc gtgcaagagc
     1201 cgtcggcgca ttccatggac ttcgatggaa ccgcggcacc cttggccgcc gatgccggcg
     1261 gcacggaatc cccgacaccg gccatcgagg cgcccgggac ggagaccccg ccgcctgcgc
     1321 aagcggccga tgcaacgcgc gcggccggca cggaagccga ccatgccgac gcgctcgatg
     1381 tcgacaccga ggcactgtcg gcgatgatcg atgcccggtt ggccgcggcg gaaggcgaac
     1441 ccgtgccgga atcccccgag gtctggcgtg tcatcgaagg tggcagcgtt tccgcggtcg
     1501 agctcccgcc gatcgagccg gaaccgcttg cggtggcgcc ttcgtcagcg ccgccgcaac
     1561 ctgcaacgcc cgtcgacgac gccgatgtat ggacggcgtt gccgccgttg gacgactggc
     1621 aactcgtcga tcccgaggct cccgccgtgc cggcttcggc tccgaagcgc gacgagcatc
     1681 cggggttgac gatcgatttc ggcggcctcg agttggtgcc catggaaacg gttgcgcggg
     1741 tggaaacggg ctcggcatcg atcgaacagt ggatgcatgc cggcgagtcc gtcgaggccg
     1801 cgggttcggc ggcgatgaag ccggtggtgg gtgccaaggg aggccaggca tgagcgcggt
     1861 ccaggctttg ccgcgcgaaa tccgcggcgt catgcttccc gtcacgggcg gccgcgtcct
     1921 cgtgcccaat accaccatgg cggaggtgat cacctacgcg caacccacgg cggtcgcgga
     1981 tgcaccgccc tggctgctgg gtcgcctcgc gtggcgcgga tggggcctcc cggtgctggc
     2041 gttctcggtg ttggccggtg ttgcggaaca tgagcctgcc gaaaacaccc gggtcgcgat
     2101 cctcaaggcc ctgagcggcc atgcgcggct gccgtatttc ggcgtcctgt gccagggctt
     2161 cccgcgcctg acgctgattt cggaagcgac actggtgctg gacgacgcgt catccggcgg
     2221 cgttctcgcc ggcgttcgag agcaggtgcg cgtgcatgac gaggcggcgt ggattccgga
     2281 tctcggcgcc atcgaggatc tggtcgtcgg cgcactggcg gcagcagcct gacacctttt
     2341 ccggtctggt cagaagtcgc cgcagacggc ttgcagtgcc gccatcgcag ccagtccggc
     2401 ggtttccgtg cgcaggatgc ggggacccaa tgcaagggcg tcaaagcccg cgcggtgcaa
     2461 tgcggccacg tccttgtcgc tgaatccacc ttccggtccc acggccagcg tcacgtccgc
     2521 cggcgtggag gcgagatgcc gcaagcgtgc gttgccaccc ggatgcagca tccagcgcac
     2581 ctccgcgcct ttctgcgggt aggcggcaag gcacgcttcc agcgag
//
LOCUS       DASSVL010000348         3692 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_926445, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000348 DASSVL010000000
VERSION     DASSVL010000348.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3692)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3692)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3692
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_926445"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..392)
                     /gene="ccsA"
                     /locus_tag="VFM52_06065"
     CDS             complement(<1..392)
                     /gene="ccsA"
                     /locus_tag="VFM52_06065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019302345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis protein CcsA"
                     /protein_id="HET8764765.1"
                     /translation="MSTWIPLWMHKLGSPPTFYRVAGVIRPWALVLALVLGAIGLYGG
                     LVLAPPDYQQGDAYRIIFIHVPSAWMSMFIYAVMGAAVFVALVWRLKLAEVVAMQSAP
                     IGAAFAAITLATGSLWGKPMWGTWWTWDA"
     gene            complement(396..1082)
                     /gene="ccmB"
                     /locus_tag="VFM52_06070"
     CDS             complement(396..1082)
                     /gene="ccmB"
                     /locus_tag="VFM52_06070"
                     /EC_number="7.6.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008434598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015232 - heme transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015886 - heme transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heme exporter protein CcmB"
                     /protein_id="HET8764766.1"
                     /translation="MARSTVAVACAAMLRRDLVLAWRRRGDLAMPVLYAVIVTVLFPF
                     ALGPDLALLQRIAGGVVLVTVLLAMLLALDAMFASDIEDGSLEQLLLAPQPPSLLLGM
                     KILAHWLTTALPLVVIAPILAGMLHLPAAAMPALVLALLFATPLLSLLGAVLVALTAG
                     TRRSGMLLALMLLPLCVPVVIFAAGAVAAAQQGLPWLAPIAWLAAALILSVVLAPLAC
                     TMALRIALDS"
     gene            complement(1084..1716)
                     /gene="ccmA"
                     /locus_tag="VFM52_06075"
     CDS             complement(1084..1716)
                     /gene="ccmA"
                     /locus_tag="VFM52_06075"
                     /EC_number="7.6.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014402525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis heme-transporting ATPase
                     CcmA"
                     /protein_id="HET8764767.1"
                     /translation="MTVIRATPLLQARQLAFHRRDEPVFAPLDFTLHAGELALIEGDN
                     GSGKTTLLRVLAGLLHVSAGELRWRGAPWQRDAVAGDILFLGHQLGQKLDLSPRENLA
                     FATGLHGRRGDVSIDATLERVGLAGYEDEPVRRLSAGQKKRAALARLLLLPATLWLLD
                     EQYANLDRHGLALVNQLLETHLAGGGAALVSSHRAMDFRDNAPQRIRMHG"
     gene            complement(1829..2251)
                     /locus_tag="VFM52_06080"
     CDS             complement(1829..2251)
                     /locus_tag="VFM52_06080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007508975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3293 domain-containing protein"
                     /protein_id="HET8764768.1"
                     /translation="MDEALLEAFRATTYHVCLDTVTWAILRVDLPPPATLAKTIGPGP
                     WAFITAWNPGARRRLPAENEAAQRQLLDEIGQVPGARAYPAIGVGTSGWSEPSLFVTG
                     LDVSAMDALARAHGQLAYVHGVAAGPATLRTLDGPREA"
     gene            complement(2244..>3692)
                     /locus_tag="VFM52_06085"
     CDS             complement(2244..>3692)
                     /locus_tag="VFM52_06085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007808065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HET8764769.1"
                     /translation="ARRLRNSGRILFADRSMAQQSITLIGGGLVGALLARLLAQRGFA
                     VEVFEKRADPRRAALAEGRSINLALAERGLQALRTTDLAAPVLDRAVMMRGRMVHDGA
                     EHCALQRYGVDDGEVIWSASRNTLNTLLLDAAEAVGVRFHFGAELVAADFDHRRIRLA
                     DAGGTQREHEAGLLIGADGAGSALRAAMAQHSPLGERVEPLGHGYKELEIPAIAAWPD
                     DQPPADAQGNFALEPNALHIWPHGHYMCIALPNAEGSFTVTLFLPAKGTHPSFESMPD
                     VAAARAFFAEQFPGLLPLMPGFDADWAQHPMGTLATLYLDRWHLDHRALLIGDAAHAI
                     VPFHGQGMNCGFEDTVTLAGLLAAEPHASAEVFVEFQRLRKPNTDAIAAMSLANYIEM
                     RDAVADPHYLAKRALEARLAPRIPGHFMAHYRMVAFTHLPYAYAQRRNDAQDVLIEQL
                     LRDTPDPAAVDLDAASRLFQAQLEPLPELARG"
BASE COUNT          608 a         1250 c         1323 g          511 t
ORIGIN      
        1 gcatcccagg tccaccacgt gccccacatc ggcttgcccc acaacgagcc ggtggccaat
       61 gtgatggcgg cgaacgcggc gccgatcggc gccgattgca tggcgacgac ttcggccagc
      121 ttcagccgcc acaccagcgc gacgaagacg gcggcgccca tcaccgcgta gatgaacatg
      181 ctcatccagg cgctgggcac gtggatgaag atgatgcggt aggcgtcgcc ttgctggtaa
      241 tccggcggcg ccagcaccag gccgccgtag aggccgatgg cgcccagcac cagcgcgagc
      301 accagcgccc acggccggat cacgccggcg acgcgataga acgtcggcgg cgagccgagc
      361 ttgtgcatcc agagcggaat ccaggtcgac atgactcacg aatccagtgc aatgcgcagg
      421 gccatggtgc aggcgagcgg cgccagcacc acgctgagga tgagagcggc ggccagccac
      481 gcgatcggtg ccagccatgg caggccctgc tgggcggcgg ccactgcgcc ggccgcgaag
      541 atcaccacgg ggacgcacag cggcagcaac atcaaggcga gcagcatacc agagcgccgg
      601 gtcccggccg tcagtgccac cagcacggcg cccagcaggc tgagcagcgg tgtggcgaac
      661 agcagcgcca gcaccagggc cggcatggcc gccgccggca ggtgcagcat gccggcgagg
      721 atcggcgcaa tcaccaccag cggcagcgcc gtggtcagcc agtgggcgag gatcttcatg
      781 cccagcagca gcgatggcgg ctgcggcgcg agcagcaatt gttcgagcga gccatcctcg
      841 atgtcgctgg cgaacatcgc atccagcgcc agcagcatcg ccagcagcac ggtgaccagc
      901 accacgccgc ccgcgatacg ctgcaggagc gcgagatccg gacccagcgc aaacggaaac
      961 agcacggtga cgatcactgc gtagagtacc ggcatggcga ggtcgccacg gcggcgccag
     1021 gccagcacga ggtcgcggcg cagcatggcg gcgcacgcga cggcaaccgt ggaccgcgcg
     1081 atctcagcca tgcatgcgga tccgctgcgg ggcgttgtcg cgaaagtcca tcgcccggtg
     1141 gctgctgacc agcgccgcgc cgccgccggc aaggtgggtt tccagcaatt ggttgaccag
     1201 cgcgaggccg tggcggtcga ggttggcgta ctgctcgtcg agcagccaca gcgtggccgg
     1261 caacagcagc aggcgggcca gcgcggcgcg ctttttctgc cccgcggaga gccggcgtac
     1321 cggctcgtcc tcgtagccgg caagcccgac gcgctccagc gtggcgtcga tcgacacgtc
     1381 gccgcgccga ccatgcaacc cggtcgcgaa ggccaggttt tcgcgcggac tcaggtcgag
     1441 cttctgcccg agctggtggc caaggaacag gatgtcgccg gcgaccgcgt cgcgctgcca
     1501 cggcgcgccg cgccagcgca gctcgcctgc gcttacgtgc agcagaccgg ccagcacgcg
     1561 cagcagggtg gtcttgccgc tgccgttgtc gccttcgatc aacgccagct cgcccgcgtg
     1621 cagggtgaaa tcgagcggcg cgaataccgg ctcgtcgcgg cggtggaacg cgagttggcg
     1681 agcctggagc aacggcgtgg cgcgaatgac agtcattacc gccattttcg acaattgccc
     1741 gcttggctgt ccatgtggtg cgctgtcgct gggcgcaggg gccgggaaac ctcccggcgg
     1801 gcttggccgc ccggaggatt tccgcggctc acgcttcccg tgggccgtcg agggtgcgca
     1861 gggttgccgg gccggcagcc acgccgtgca cgtacgccaa ttggccgtgg gcgcgggcca
     1921 gcgcgtccat cgccgacacg tcgaggccgg tgacgaacag gctcggctcg ctccagcccg
     1981 aagtgccgac gccgatcgcc gggtaggcgc gggcgcccgg cacctggccg atctcgtcca
     2041 gcaactggcg ctgtgccgcc tcgttctccg ccggaagacg ccgccgcgcc ccgggattcc
     2101 atgcggtgat gaaagcccac ggcccggggc cgatggtctt cgccagggtt gccggcgggg
     2161 gcaggtccac gcggaggatc gcccacgtca ccgtgtcgag gcagacatgg tacgtggtgg
     2221 cgcgaaacgc ttcgagcagg gcttcatcca cgggcgagtt ccggcagggg ttccaactgg
     2281 gcctggaaaa ggcggctggc ggcgtcgaga tcgacggccg ccggatcggg agtatcgcgc
     2341 agcagttgtt cgatcagcac atcctgcgcg tcgttgcggc gttgcgcata ggcatacggc
     2401 aggtgggtga acgccaccat gcggtagtgc gccatgaagt gccccgggat gcgcggcgcc
     2461 aggcgcgcct cgagcgcgcg cttggcgagg tagtgcggat cagccacggc atcgcgcatc
     2521 tcgatgtagt tcgcgagcga catcgcggcg atggcgtcgg tgttcggctt gcgcaggcgc
     2581 tggaattcga cgaagacctc cgcgctggcg tgcggctcgg cagccagcaa cccggcgagc
     2641 gtcacggtgt cctcgaagcc gcaattcatg ccctggccgt ggaacggcac gatggcgtgc
     2701 gcggcgtcgc cgatcagcag ggcgcggtgg tcgagatgcc agcgatcgag atacagcgtg
     2761 gccagcgtgc ccatcggatg ctgcgcccag tcggcgtcga aacccggcat cagcggcagc
     2821 aggccgggga attgctcggc aaagaatgcg cgtgccgccg cgacgtccgg catgctttcg
     2881 aagctgggat gggtgccctt ggccggcagg aacaaggtga cggtgaagct gccttccgcg
     2941 ttgggcagcg cgatgcacat gtaatgaccg tgtggccaga tgtgcagcgc gttcggctcc
     3001 agcgcgaagt tgccttgcgc gtcggcgggt ggctggtcgt cgggccaggc tgcgatggcc
     3061 gggatctcca gctccttgta accatggccg agcggctcga cgcgctcacc cagcggcgag
     3121 tgctgcgcca ttgccgcgcg cagcgccgaa cccgcgccat cggcgccgat aagcaggccg
     3181 gcttcgtgtt cgcgctgcgt accgccggca tcggcaagcc ggatacggcg gtggtcgaaa
     3241 tccgcggcga ccagctccgc cccgaaatgg aatcgcacgc cgacggcttc ggccgcatcc
     3301 agcagcaggg tgttgagcgt gttgcgcgag gcggaccaga tcacctcgcc atcgtcgacg
     3361 ccgtagcgct gcagcgcgca gtgttccgcc ccgtcatgca ccatccgtcc gcgcatcatc
     3421 accgcgcggt cgagcaccgg cgcggcgagg tcggtggtgc gcaatgcctg caggccgcgt
     3481 tcggccagcg cgaggttgat cgagcgtccc tcggccagtg ccgcgcggcg cggatcggcg
     3541 cgcttttcga acacctccac cgcgaaaccg cgttgtgcca gcagccgcgc cagaagtgcg
     3601 ccgaccaggc cgccgccgat cagggtgatg gattgctgcg ccatgctgcg gtccgcgaag
     3661 agaatccgcc cactgttccg caagcggcgc gc
//
LOCUS       DASSVL010000349         2207 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_64458, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000349 DASSVL010000000
VERSION     DASSVL010000349.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2207)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2207)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2207
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_64458"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..603)
                     /locus_tag="VFM52_06090"
     CDS             complement(<1..603)
                     /locus_tag="VFM52_06090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005997967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HET8764770.1"
                     /translation="MPSFFIDRPIFAWVVAILISLGGVLAILNLGVESYPNIAPPQVT
                     VTASYPGASADTTEKTVTQVIEQQLTGIDHLLYFSSSSASNGRSSITLTFETGTDPDI
                     AQVQVQNKVALATPRLPSEVTQQGVVVAKANAGFLMVVALRSDNPNIDRDRLGDIVGS
                     QVLDQIARVPGVGSTQQFGSEYAMRIWLNPDQLHGYGLSAT"
     gene            complement(616..1800)
                     /locus_tag="VFM52_06095"
     CDS             complement(616..1800)
                     /locus_tag="VFM52_06095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007079799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HET8764771.1"
                     /translation="MKPSFLRASALGAGLLVLAACGSHGANPAQMPPPAVGTITVQPQ
                     NEPLTKDLVGRLSAYRSADVRARVAGLVLKRSYVEGSDVKKGQLLFEIDPATYQAALN
                     ASLANLAAAKATYANAHVIAQRDRQLVTKGYVSRAQLDTDEATERSAAAAVQQAQSSV
                     AAARINLGYTKVTSPIDGRAGQQRVTEGAIVGNGTSDAGANATLLTTVDQIDPLYVNF
                     TMSVADMEQLRQAQQKGGVTLAQPDQASVQVTLPDGSVYPQPGTMDFTSATVDPATGS
                     VNLRALLPNPKHTLLPGMYVTLKARLGEQHRVFVVPQQAVLRDTVGPYVYVAGKDGNA
                     KRHDVTTQSMHDGNWIVNGGLAAGDQVIVSGVQDVHDDEPVKASAWKPEPAANGTKAA
                     GK"
BASE COUNT          322 a          694 c          780 g          411 t
ORIGIN      
        1 cgtggccgac aggccgtagc cgtgcagctg gtccgggttg agccagatgc gcatggcgta
       61 ctcggaaccg aactgctgcg tgctgcccac gccgggcacg cgcgcgatct ggtcgagcac
      121 ctgcgagccg acgatgtcgc ccaggcggtc gcggtcgatg ttcgggttgt cggacctgag
      181 cgccaccacc atcaggaagc cggcgttggc cttggccacc accacgccct gctgggtcac
      241 ctcggaaggc aggcgcgggg tggccagcgc caccttgttc tgcacttgca cctgggcaat
      301 gtcgggatcg gtgccggtct cgaaggtcag ggtgatgctg gagcggccgt tcgacgcgga
      361 cgacgagctg aaatacagca ggtggtcgat gccggtgagc tgctgctcga tcacctgggt
      421 gacggttttt tcggtggtgt ccgcgctggc gccggggtag ctcgccgtca ccgtcacctg
      481 cggcggcgcg atgttcggat aggactcgac gcccaggttg aggatggcga gcacgccgcc
      541 cagcgaaatc aggatggcca ccacccacgc gaagatcggg cggtcgatga agaaactcgg
      601 catggtcggt ctccgttact tgccggcagc cttggtgcca tttgccgcgg gctcgggttt
      661 ccacgccgag gccttgaccg gttcgtcgtc gtgcacgtcc tgcacgccgg aaacgatcac
      721 ctggtcgcca gcggcaaggc cgccattcac gatccagttg ccgtcgtgca tgctctgcgt
      781 ggtgacgtcg tggcgtttcg cattgccgtc cttgccggcg acgtagacgt acggcccgac
      841 ggtgtcacgc agcactgcct gctgcggcac cacgaacacc cggtgctgct cgccgagtcg
      901 cgccttgagc gtgacgtaca tgcctggcag cagggtgtgc ttcgggttgg gcagcagggc
      961 acgcaggttg accgagccgg tggccgggtc gaccgtggcc gaggtgaagt ccatcgtgcc
     1021 cggctgcggg tagacgctgc cgtccggcag tgtcacctgc acgctggcct gatcgggttg
     1081 cgccagcgtc acgccgcctt tttgctgcgc ctggcgcagc tgttccatgt cggcgacgct
     1141 catcgtgaag ttcacgtaca gcgggtcgat ctggtcgacc gtggtcagca gcgtcgcgtt
     1201 ggcgccggca tcgctcgtgc cgttgccgac gatggcgccc tcggtcaccc gctgctggcc
     1261 ggcgcggccg tcgatcggcg aggtcacctt ggtgtagccg aggttgatgc gtgcggcggc
     1321 cacgctcgac tgtgcctgct gcacggcggc ggcggcgctg cgctcggtgg cctcgtcggt
     1381 gtccagttgc gcacgcgaca cgtagccctt ggtgaccagt tggcggtcgc gttgggcgat
     1441 cacgtgcgcg ttggcgtagg tggccttggc ggcggcgagg ttggcgaggc tggcattgag
     1501 tgccgcctgg taggtcgccg ggtcgatctc gaacagcaac tggcccttct tcacgtcgct
     1561 gccctcgacg tagctgcgct tgagcaccag tccggcgacg cgcgcgcgga catcggcgct
     1621 gcggtacgcg gacaggcgac cgacgagatc cttcgtcagt ggctcgtttt gcggctgcac
     1681 ggtgatggtg ccgaccgccg gcggcggcat ctgggccggg ttggcgccgt ggctgccgca
     1741 ggccgccaat accagcaagc cggcacccag ggcggatgcg cgcaggaacg atggtttcat
     1801 ggggactcca aaacggggcg tagtagggca gtgcaaccgg ctgaacgcac atgtccgtcg
     1861 aagcgcggac tttgcggccc aatcggcggg atgtcgcgtg ccgaaggtca agtcgcaaca
     1921 cctggcacgc aacgggcccg ggttgcgagg ccgcaactat actgcacggt acacaatttc
     1981 tggaagtcgc ccctcgttca gcctcgttcg ctgcgaggcg gcaacccggg aaagcttcgc
     2041 gggctgcgat ccggcatctc cgtcccgccg cagggatgtt gcataacagc aagaatctgc
     2101 agggtttatg cggctgtgca caacggtatt gcgcggtgga ttggccccgg gacacagcgt
     2161 atcctttcag ggctttatcg cgtcaattcg tttccacttc cacagta
//
LOCUS       DASSVL010000350         3433 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1406177,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000350 DASSVL010000000
VERSION     DASSVL010000350.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3433)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3433)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3433
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1406177"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..571)
                     /locus_tag="VFM52_06100"
     CDS             complement(<1..571)
                     /locus_tag="VFM52_06100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007082598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase factor sigma-54"
                     /protein_id="HET8764772.1"
                     /translation="MKPGLQLRLHQQLTLTPQLQLAIRLLQLSQLELETELRELAESN
                     PLLEFDDDAQEDEAATEAEPATAATEYATADDVVEAAADRGNDGEDNTEWADNGGASA
                     ETPIDFSSSVGNGAASRGDDDFEPQNAAPETLQQHLGWQLNLAGFNPRQTAIATVIID
                     ALNADGYLADGIEAAQAALPADLVVGLDEI"
     gene            complement(660..1379)
                     /gene="lptB"
                     /locus_tag="VFM52_06105"
     CDS             complement(660..1379)
                     /gene="lptB"
                     /locus_tag="VFM52_06105"
                     /EC_number="7.5.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005913374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0015221 - lipopolysaccharide transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015920 - lipopolysaccharide transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter ATP-binding protein"
                     /protein_id="HET8764773.1"
                     /translation="MLSAEGLQKSFKARQVVRDFGFSIREGEVVGLLGPNGTGKTTCF
                     YMVVGLIEADAGTIRLDKQDITGLPMHQRAKLGIGYLPQEASVFRRLSVADNILAVLE
                     LREGLSAQQRDNELESLLDELKIEHLATQKGISLSGGERRRVEIARALAANPRYMLLD
                     EPFAGVDPISVGEIQRIVRHLRERGIGVLITDHNVRETLGICDRAYILNEGVVLSRGT
                     PAHILADDKVREVYLGREFKL"
     gene            complement(1379..1915)
                     /gene="lptA"
                     /locus_tag="VFM52_06110"
     CDS             complement(1379..1915)
                     /gene="lptA"
                     /locus_tag="VFM52_06110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019466407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0001530 - lipopolysaccharide binding
                     [Evidence IEA];
                     GO_process: GO:0015920 - lipopolysaccharide transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide transport periplasmic protein
                     LptA"
                     /protein_id="HET8764774.1"
                     /translation="MARTRRTGTSLKFAIGLLAALLLVPLAQAKKTDRDQPMAYQAKH
                     TDAYNAPNTVTTLTGDVKITQGSMLLTGDKAEIHLDGDQQISQVVVTGKPAHIQQLDD
                     AGNLMTGDAATLDYDNLKGIAVLTGTASVTQQNRGEFHGDKLTYNTETSQITGDAGGD
                     GLVHGVILPKQKPATGGK"
     gene            complement(1887..2489)
                     /gene="lptC"
                     /locus_tag="VFM52_06115"
     CDS             complement(1887..2489)
                     /gene="lptC"
                     /locus_tag="VFM52_06115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008208001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015221 - lipopolysaccharide transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015920 - lipopolysaccharide transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter periplasmic protein
                     LptC"
                     /protein_id="HET8764775.1"
                     /translation="MITRLRLWLRDRKVTSAIVLVGLAAGLAQLVLWWIGPTPKPNDF
                     VGPPRSGYVLDDAHVWSYNEAGALAFRMQSPHIERREGDDSLYINSPVFDLAARKPGI
                     PDWHGQSLYGWVNRAGTLIKLQGPVSMHRPPYADNAAADLVTSDVDVWPKENRMATAA
                     PAQMTQGDLKMGGVGMRASLNDNHLELLDDSYGTYPPHRH"
     gene            complement(2486..3028)
                     /locus_tag="VFM52_06120"
     CDS             complement(2486..3028)
                     /locus_tag="VFM52_06120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007511579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD hydrolase family protein"
                     /protein_id="HET8764776.1"
                     /translation="MPYLNNIPPDILARAAKIRVAAFDVDGTLTDGRLWYGEDGLEAK
                     VFHVHDGLGLKRLQANGIAVALVTARISHPVALRAEELGISHVYQGQGDKRACLEALL
                     DALDLAPEQAAFTGDDLPDLPALHLAGLAIAVANAHPWVAGEAHWQTRLPGGMGAARE
                     VADLLLLAQGKADAELRHWR"
     gene            complement(3113..>3433)
                     /locus_tag="VFM52_06125"
     CDS             complement(3113..>3433)
                     /locus_tag="VFM52_06125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015448609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HET8764777.1"
                     /translation="LPAALVEMTRTRLGMTAVVDADDRLLGVFTDGDLRRALDDESIN
                     LRSSAVASLMTRAPKTIGPDKLASEAAQLMEKHQIHALLVVDAGNHVIGALNIHDLLR
                     ARVV"
BASE COUNT          461 a         1091 c         1251 g          630 t
ORIGIN      
        1 cgatctcgtc gaggccgacg accagatcgg caggcaacgc cgcctgcgcc gcctcgatgc
       61 cgtcggcgag gtaaccgtcg gcgttcagcg cgtcgatgat caccgtggcg atggcggtct
      121 ggcgcgggtt gaagccggcc aggttgagtt gccagccgag gtgttgctgc agcgtctcgg
      181 gcgccgcgtt ctgcggctcg aagtcgtcgt cgccgcggct ggcggcgcca ttgccgacgc
      241 tgctggagaa gtcgatcggc gtctcggcgc tggcgccacc gttgtcggcc cactcggtgt
      301 tgtcctcgcc gtcgttgccg cggtcggcgg cggcttcgac gacgtcgtcg gcggtggcgt
      361 attccgtggc ggcggttgcc ggctcggcct cggtggcggc ctcgtcttcc tgcgcgtcgt
      421 cgtcgaattc gagcagcgga ttgctttccg cgagctcgcg cagctcggtt tccagttcga
      481 gttgcgatag ttgcaacagg cgtatcgcca attgcagttg tggcgtcagg gtgagctgct
      541 ggtggaggcg gagttgcagt cctggtttca tgccgaccat gcgtggagcg tcgtggcccc
      601 atcctacccg cacgtggtgg gggcatccac atcggggtcg cggcgttgtg aaaccggcgt
      661 caaagcttga attcgcgacc gaggtagacc tcgcgcacct tgtcgtcggc gaggatgtgc
      721 gccggggtgc cgcgagagag cacgacgccc tcgttcagga tgtacgcgcg gtcgcagatg
      781 ccgagcgtct cgcgcacgtt gtggtcggtg atcagcacgc cgatgccgcg ctcgcgcagg
      841 tggcgcacga tgcgctggat ctcgccgacg gaaatcgggt cgaccccggc gaagggctcg
      901 tccagcagca tgtagcgcgg gttcgcggcc agcgcgcgcg cgatctcgac gcgccggcgc
      961 tcgccgccgg aaaggctgat gcccttctgc gtggcgaggt gctcgatctt cagctcgtcg
     1021 agcaggcttt ccagctcgtt gtcgcgctgc tgcgcggaaa ggccttcgcg cagttcgagc
     1081 acggccagga tgttgtcggc cacgctcagg cggcggaaca ccgaggcttc ctgcggcagg
     1141 tagccgatgc cgagcttggc gcgctggtgc atcggcaggc cggtgatgtc ctgcttgtcg
     1201 aggcggatgg tgccggcgtc ggcctcgatc aggccgacca ccatgtagaa gcaggtggtc
     1261 ttgccggtgc cgttcgggcc gagcagcccc accacctcgc cctcgcggat ggagaacccg
     1321 aagtcgcgta cgacctggcg tgccttgaag cttttctgca aaccttccgc ggacagcatc
     1381 acttgccgcc cgtcgccggt ttttgcttcg gcaggatcac gccgtgcacc agcccgtcgc
     1441 cgccggcgtc gccggtgatc tggctggtct cggtgttgta ggtgagcttg tcgccgtgga
     1501 actcgccgcg gttctgctgg gtcacgctcg cggtgccggt cagcacggcg atgcccttga
     1561 ggttgtcgta gtcgagcgtg gccgcgtcgc cggtcatcag gttgccggcg tcgtcgagct
     1621 gctggatgtg cgccggcttg ccggtcacca ccacctgcga gatctgctgg tcgccgtcca
     1681 ggtggatttc cgccttgtcg ccggtcagca gcatgctgcc ctgggtgatc ttcacgtcgc
     1741 cggtgagcgt ggtcaccgta ttcggcgcgt tgtacgcgtc ggtgtgcttg gcctggtagg
     1801 ccatcggttg gtcgcggtcg gtctttttcg cctgcgcgag cggcaccagc agcagcgcgg
     1861 cgagcaggcc gatggcgaac ttgagactag tgccggtgcg gcgggtacgt gccatagctg
     1921 tcatcgagca actccaggtg attgtcgttg aggctggcac gcatgccgac cccacccatc
     1981 ttaaggtcgc cctgcgtcat ctgcgccggg gcggcggtgg ccatgcggtt ttccttcggc
     2041 cacacgtcga cgtcgctggt gacgaggtcg gcggcggcat tgtccgcgta gggggggcgg
     2101 tgcatgctga ccggcccctg cagcttgatc agcgtgccgg cgcggttgac ccagccgtac
     2161 agcgactggc cgtgccagtc cggtatgccg ggtttccttg cggcgaggtc gaacaccggg
     2221 ctgttgatgt acagcgagtc gtcaccctcg cggcgctcga tgtgcggcga ctgcatgcgg
     2281 aacgccagtg cgccagcctc gttgtaactc cacacgtggg cgtcgtcgag cacgtagccg
     2341 gagcgcggcg ggccgacgaa atcgttgggt ttcggtgtcg gcccgatcca ccacagcacg
     2401 agctgggcga ggccggcggc aaggccgacc agcacgatcg cgctggtgac cttgcggtcg
     2461 cgcagccata ggcgcaggcg cgtgatcacc gccaatgccg cagctccgca tcggccttgc
     2521 cctgggcgag cagcagcagg tcggccacct cgcgcgcggc gcccatgccg ccgggcaggc
     2581 gggtctgcca gtgggcttcg ccggcaaccc aggggtgggc gttggcgacc gcgatcgcca
     2641 gcccggcgag gtgcagcgcc ggcaggtcgg gcaggtcgtc gccggtgaac gcggcctgtt
     2701 ccggcgccag atccagcgcg tcgagcaggg cttcgagaca ggcgcgcttg tcgccctggc
     2761 cctggtagac atgggaaatg ccgagttctt ccgcgcgcag cgccaccggg tggctgatgc
     2821 gcgcggtgac cagcgcgacg gcgatgccgt tcgcctgcag gcgcttcagg cccagcccgt
     2881 cgtgcacgtg gaacaccttg gcttcgaggc catcctcgcc gtaccagagg cggccgtcgg
     2941 tcagcgtgcc gtcgacgtcg aaggcggcga cgcggatctt tgcggcgcgg gcgaggatgt
     3001 cgggcgggat gttgttcaag taaggcatga ggactgagtt tgatcgcgaa aggcgtcgaa
     3061 gggcgggctt gcctgatggg ccgattcgcc aaggcgaatc ggccagcgca aatcaaacga
     3121 cacgcgcacg gagcagatca tgaatgttga gcgcgccgat cacgtggttg ccggcatcga
     3181 ccaccagcaa cgcgtggatc tggtgcttct ccatcagctg cgcggcctcg ctggcgagct
     3241 tgtccgggcc gatggtcttc ggcgcgcggg tcatcaggct ggccacggcc gagctgcgca
     3301 ggttgatgct ttcgtcgtcc agtgcgcggc gcagatcgcc gtcggtgaac acgccgagca
     3361 ggcggtcgtc ggcatcgacc acggcggtca tgccgagccg cgtgcgggtc atctcgacca
     3421 gcgcggccgg gag
//
LOCUS       DASSVL010000351         3503 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1363906,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000351 DASSVL010000000
VERSION     DASSVL010000351.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3503)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3503)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3503
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1363906"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..561)
                     /gene="aroC"
                     /locus_tag="VFM52_06130"
     CDS             complement(<1..561)
                     /gene="aroC"
                     /locus_tag="VFM52_06130"
                     /EC_number="4.2.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017354299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004107 - chorismate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate synthase"
                     /protein_id="HET8764778.1"
                     /translation="MASNTFGKLFAVTTFGESHGPAIGCVIDGCPPGVAVAPEDFVHD
                     LARRATGRSRYTSQRHEADAVEILSGVYRGQTTGTPIALVIRNTDARSQDYAEIADVF
                     RPGHADYTYWQKYGMRDPRGGGRASARETTMRVAAAVIAKRWLADRYGVAVHGWLAQL
                     GDMVPGLADDAAIDFDVVEANPFFWPV"
     gene            complement(594..1121)
                     /locus_tag="VFM52_06135"
     CDS             complement(594..1121)
                     /locus_tag="VFM52_06135"
                     /inference="COORDINATES: protein motif:HMM:NF024698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HET8764779.1"
                     /translation="MDIVTARLRLDALLPADAPALFAYRSDPAVSRWQGWQPATVVDA
                     EHFIEVQQGAAPDMPGAWWQRAIRLRATRELIGDAGVHNVDAETVELGITLAPAQQRH
                     GYARETLEVILDYVFGGLQKQHAIALVAPGNLRCMRLLEGVGMRRIAAPGDDVMYTLP
                     RAAWLAPPANWDDRG"
     gene            complement(1125..2042)
                     /gene="prmB"
                     /locus_tag="VFM52_06140"
     CDS             complement(1125..2042)
                     /gene="prmB"
                     /locus_tag="VFM52_06140"
                     /EC_number="2.1.1.298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018974049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008276 - protein methyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0018364 - peptidyl-glutamine methylation
                     [Evidence IEA];
                     GO_process: GO:0042273 - ribosomal large subunit
                     biogenesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3 N(5)-glutamine
                     methyltransferase"
                     /protein_id="HET8764780.1"
                     /translation="MTTELATIIDFIRYAASRFSAAGLTFGHSHDNAIDEASHLVLST
                     LHLPPDLPPAYGSARLTADEQAQVLALVERRIQTREPVAYLVGEAWFAGMPFKSDPRA
                     LVPRSPIAELIEDGFSPWLDGREVERALDLCTGSGCIGIAMAAYNPRWQVDIADISDD
                     ALALARENIARHQLGAQVRVVRSDLFAGLGDARYELIVSNPPYVTDAEYAALPGEYAH
                     EPKLGLTAGSDGLDIALRILRAAPAHLADDGLLIVEVGDSERALAALLPDVPFVWIEF
                     KVGPMGVFAIERADLVQHAAAIRAVADAR"
     gene            2100..2990
                     /gene="asd"
                     /locus_tag="VFM52_06145"
     CDS             2100..2990
                     /gene="asd"
                     /locus_tag="VFM52_06145"
                     /EC_number="4.1.1.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003467477.1"
                     /note="Phosphatidylserine decarboxylase is synthesized as
                     a single chain precursor. Generation of the pyruvoyl
                     active site from a Ser is coupled to cleavage of a Gly-Ser
                     bond between the larger (beta) and smaller (alpha chains).
                     It is an integral membrane protein; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004609 - phosphatidylserine decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="archaetidylserine decarboxylase"
                     /protein_id="HET8764781.1"
                     /translation="MHAATLVQHLVPQKTLSRIVRAATRWAWRPWKNFLIGRVVRAYA
                     VDMAQAAEPDPRAYPTFNAFFTRALRAGARPVEGDANTLACPADGCISQIGRITDGRI
                     LQAKGRSYTVAELLADTDAAKAYATGCFATIYLSPRDYHRVHMPLAGELVATVHVPGH
                     LFSVAPGPVADIPNLFARNERLVCHFEGSQGPFVVVLVGAMLVSGITTVWSGTAVPPY
                     TRSVMREDWRGRGIHLARGVELGRFEMGSTVIVLVPAGEPAARLDTGTAVRVGQRLAD
                     LPSAANPVTIARQGGDNGSA"
     gene            3002..3457
                     /locus_tag="VFM52_06150"
     CDS             3002..3457
                     /locus_tag="VFM52_06150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8764782.1"
                     /translation="MISQGPKSGADTYLRRLVTRVTSMGRTARLRRQLDEIGRRSLEL
                     PRSYRRELAELIGRECDNVAASAEPALYGAQDAAGNAGSGLDVGFDRARSENVHVRMR
                     GIALWVALVFQETRHAETPEAQDLHRAVLHILRELKVFSSRVEHNGNQA"
BASE COUNT          567 a         1246 c         1167 g          523 t
ORIGIN      
        1 caccggccag aagaacgggt tcgcttcgac gacgtcgaaa tcgatcgcgg catcgtcggc
       61 aagacccggc accatgtcgc ccagttgcgc gagccagccg tgtaccgcga cgccataccg
      121 gtcggcgagc cagcgtttgg cgatcaccgc cgctgcgacc cgcatcgtcg tctcgcgcgc
      181 cgaggcgcgc ccgccgccac gcggatcgcg catgccgtac ttctgccagt aggtgtagtc
      241 ggcgtgcccg ggccggaaca cgtcggcgat ttcggcgtaa tcctgcgacc gcgcatcggt
      301 gttgcggatc acaagtgcga tcggcgtacc ggtcgtctgg ccccggtaca cgcccgagag
      361 gatttccacc gcatcggcct cgtgccgttg cgaggtatag cgcgaccgcc cggtcgcccg
      421 ccgcgcgagg tcgtgcacga aatcttccgg cgccaccgcg acgccaggcg gacagccatc
      481 gatgacgcag ccgatcgccg gcccgtgcga ttcgccgaag gtcgtgactg cgaacagctt
      541 gccgaaggta ttggatgcca ccgcgcgtga ccgtgcgttg cgaaggcgca agcttagccg
      601 cggtcgtccc agtttgccgg cggggccagc cacgccgcgc gcggcagtgt gtacatgacg
      661 tcatcccccg gcgcggcgat acgccgcatg ccgacacctt ccagcagccg catgcaccgg
      721 aggttgcccg gcgcgaccag cgcgatcgcg tgctgtttct gcagaccgcc gaagacgtag
      781 tccaggatca cttccagcgt ttcacgcgcg taaccgtggc gctgctgcgc cggcgcgagg
      841 gtgatgccaa gctcgaccgt ctccgcatcg acgttgtgca cgccggcatc gccgatcaac
      901 tcgcgcgtgg cgcgcagccg gatcgcgcgc tgccaccacg cgcccggcat gtcgggcgcg
      961 gcgccctgct ggacttcgat gaagtgctcg gcatcgacaa ccgtggccgg ctgccaaccc
     1021 tgccaacgac tgaccgcggg atcgctgcga taggcaaaca acgccggcgc gtcggccggg
     1081 agcaaggcgt cgagccgcaa gcgggcggtg acgatgtcca cgcctcagcg cgcgtcggcc
     1141 acggcgcgga tcgccgccgc gtgttgcacg aggtcagccc gctcgatcgc gaacacgccc
     1201 atcggcccga ccttgaactc gatccacacg aacggcacgt cgggcaacag cgccgccagc
     1261 gcgcgttcgc tgtcgcccac ctcgacgatc aacaatccgt cgtccgccag atgcgcgggc
     1321 gcagcgcgca ggatgcgcag cgcgatgtcg agaccgtcgc tgcccgcggt caagccaagc
     1381 ttgggctcgt gcgcgtattc gcccggcaac gccgcgtatt cggcatccgt aacataaggc
     1441 ggattcgaca cgatcaattc gtagcgcgca tcgccaagcc cggcaaacag gtccgaccgc
     1501 acgacccgca cctgggcacc gagctggtgc ctggcgatat tctcccgcgc cagcgccagc
     1561 gcgtcgtcgc tgatgtcggc gatatcgacc tgccagcgcg ggttgtaggc cgccatcgca
     1621 atgccgatgc agccggaacc cgtgcacagg tcgagcgcgc gttccacctc gcggccatcg
     1681 agccacggcg aaaacccgtc ctcgatcaat tcggcgatcg gcgagcgcgg caccagcgcg
     1741 cgcggatccg acttgaacgg catcccggca aaccacgcct cgcccacgag gtaggcgacc
     1801 ggctcgcggg tctggatgcg gcgttcgacc agcgccagca cctgcgcctg ctcgtccgcg
     1861 gtcaggcgtg cgctgccgta ggccggcggc aggtccggcg gcaggtgcag cgtcgagagc
     1921 accaggtggc tcgcctcgtc gatggcgttg tcgtggctgt ggccgaaggt caggccggcc
     1981 gcactgaagc ggctcgcggc atagcggatg aaatcgatga tggtggccag ttcagtggtc
     2041 atgcgcggct cgcccgaaag cgcggagtat aaaagcggca tggccgttac actgccgcga
     2101 tgcatgcggc cacgctcgtc caacacctcg tcccccagaa gaccctgagc cgtatcgtcc
     2161 gcgccgccac gcgctgggcc tggcggccgt ggaagaactt tctgatcggt cgcgtggtgc
     2221 gcgcctatgc agtcgacatg gcccaggcag ccgagcccga tccgcgggcg tacccgacct
     2281 tcaacgcgtt tttcacccgc gccttgcgcg ccggggcgcg accggtcgaa ggcgacgcca
     2341 acacgctcgc ctgcccggcc gatggctgca tcagccagat tggtcgcatc accgatggcc
     2401 gcatcctgca ggccaagggt cgcagctaca ccgtcgccga gctgctggcc gacaccgacg
     2461 ccgccaaggc ttatgcgaca gggtgctttg cgacgatcta cctgtcgccg cgcgactacc
     2521 accgcgtcca catgccgctc gccggcgagc tggtggcgac cgtgcatgtc ccggggcacc
     2581 tgttcagcgt tgccccgggg ccggtcgccg acatccccaa cctgttcgcc cgcaacgaac
     2641 ggctggtctg ccatttcgaa ggctcccagg ggccgttcgt ggtagtactg gtcggcgcga
     2701 tgctggtgtc gggcatcacc acggtctgga gcggaacagc cgtgccgccg tacacgcgca
     2761 gcgtcatgcg cgaggactgg cgcgggcgcg gcatccatct cgcgcgcggc gtcgaactgg
     2821 gccgtttcga gatgggctcg accgtgatcg tgctcgtacc agccggcgaa cccgcggcgc
     2881 gcctcgacac cggaaccgcg gtccgggtgg gccagcggct ggcggatttg ccgtccgccg
     2941 ccaacccggt cacaatcgcg cgccaggggg gagacaacgg aagcgcatga ggaacctgtc
     3001 cttgatctcg caaggcccga aatcgggggc tgatacctac cttcggcgcc tggtgacgcg
     3061 cgtcaccagc atggggcgca ctgcgcgcct gcgccgccag ctcgacgaga tcggccgccg
     3121 cagcctcgaa ctgccgcgct cgtatcgccg ggagcttgcc gagctgatcg ggcgcgagtg
     3181 cgacaacgtc gccgccagcg ccgagcccgc gctctatggc gcccaagatg cagcgggcaa
     3241 tgccggcagc ggcctggacg tcggcttcga ccgggcacgt tcggaaaacg tgcatgtacg
     3301 gatgcgcggc atcgcattgt gggttgccct ggttttccag gaaacccgcc acgccgagac
     3361 acccgaagcc caggacctgc accgtgcggt cctgcacatc ctgcgcgaat tgaaggtctt
     3421 ttcatcgcgc gtggagcaca acggcaacca ggcgtaagcg cgacgccgcg gaaccacgcg
     3481 gcggcgccgg gcccgttttt tca
//
LOCUS       DASSVL010000352         2411 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_629533, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000352 DASSVL010000000
VERSION     DASSVL010000352.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2411)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2411)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2411
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_629533"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..673
                     /locus_tag="VFM52_06155"
     CDS             <1..673
                     /locus_tag="VFM52_06155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015449063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HET8764783.1"
                     /translation="RHPTLGAVSPSVFVPLAEQSGLMRTLTDWALDRGIAQLAEWLRA
                     GLDLYLALNVAGIDLDATLEQRLRTIAQRHGVPLDRIELEFTESTAIHHDEVTREVLG
                     ALRRAGVGIAIDDFGIGYSNLDALRRMPATTLKIDQSLVRGLDTHPHDAAIVRTMTAL
                     GHDLGFRVVMEGVENPGVFATARDFGCDLVQGFHLARPLPAAAVPYWVREFNAHGNPA
                     TTIKP"
     gene            670..1083
                     /locus_tag="VFM52_06160"
     CDS             670..1083
                     /locus_tag="VFM52_06160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019463738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase C13"
                     /protein_id="HET8764784.1"
                     /translation="MKTRTRRRLPIRLAIVLLLAAPPALAGSDFAGRVQQAKLAEAAA
                     TGPGYQKALWAQIGTATGHAYQACLKASTPQDKTPFTLVLALDTHGKPHDVAAQPAIP
                     VAECMVKTFAGWTFPVPPAKPAPYPLEIDFSVTGE"
     gene            complement(1141..1884)
                     /gene="gpmA"
                     /locus_tag="VFM52_06165"
     CDS             complement(1141..1884)
                     /gene="gpmA"
                     /locus_tag="VFM52_06165"
                     /EC_number="5.4.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015449065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004619 - phosphoglycerate mutase activity
                     [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-diphosphoglycerate-dependent
                     phosphoglycerate mutase"
                     /protein_id="HET8764785.1"
                     /translation="MHKLVLIRHGQSQWNLENRFSGWADVDLTPQGVTEAREAGELLK
                     REGYAFDVAHTSVLKRAARTLWHVQDAMDLMWLPVHTDWRLNERHYGGLTGLNKAETA
                     QKYGDAQVKIWRRSYDVPPPPMDHAANPSRSDPRYARLAPAQIPDTECLQDTVARVLP
                     YWHEVLAPAISAGQRVVVAAHGNSLRALVKYLDGISDADIVELNIPNGVPLVYEFDDA
                     LVPQRHYYLGDAAAIAAKTAAVANQGKAK"
     gene            2216..>2411
                     /locus_tag="VFM52_06170"
     CDS             2216..>2411
                     /locus_tag="VFM52_06170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014089845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8764786.1"
                     /translation="MPPADRPTHQTLLRPLLKTGKRDVPWAVAARNTAAIVLPLVVGQ
                     LAGQLGAGLAVGTGALVTMFA"
BASE COUNT          344 a          880 c          832 g          355 t
ORIGIN      
        1 gcgccacccg acgctgggtg cggtgtcgcc cagcgtgttc gtgccgcttg ccgagcagtc
       61 cggcctgatg cgcacgctga ccgattgggc gctcgaccgc ggcatcgcgc aactcgcgga
      121 atggttgcgc gccggcctcg acctgtacct ggcgctgaat gtcgccggca tcgatctcga
      181 cgccacgctc gaacagcgcc tgcgcaccat cgcacagcgc cacggcgtgc cgctcgaccg
      241 gatcgagctc gagttcaccg aaagcaccgc gatccaccac gacgaagtga cccgcgaagt
      301 gctcggcgcg ctgcgtcgcg ccggcgtcgg catcgcgatc gacgacttcg gcatcggcta
      361 cagcaatctc gacgcgctgc gccggatgcc ggccaccacg ctcaagatcg accagtcgct
      421 ggtgcgcggg ctggataccc acccgcacga cgccgcaatc gtgcgcacca tgaccgcact
      481 cggccacgac ctcggtttcc gcgtggtgat ggaaggcgtg gaaaaccccg gcgtgttcgc
      541 caccgcgcgc gacttcggct gtgacctggt gcagggcttc cacctcgcgc gcccgctgcc
      601 ggccgccgcc gtgccgtact gggtgcgcga gttcaacgcg cacggcaacc ccgcgaccac
      661 catcaagcca tgaaaacccg cacaagaaga cgcctgccga tccgcctcgc catcgtcctg
      721 ctcctggccg cgccgccggc gctcgccggc agcgacttcg ccggccgcgt gcaacaggcg
      781 aagctcgccg aggcggcggc gaccgggccg ggctaccaga aggcgctgtg ggcgcagatc
      841 ggcaccgcca ccggccacgc ctaccaggcc tgcctcaagg cctcgacgcc gcaggacaag
      901 acgccgttca cgctggtgct tgccctggat acgcacggca agccgcacga cgtggccgcg
      961 cagccggcga tcccggtcgc cgagtgcatg gtcaagacct ttgccggctg gacgttcccg
     1021 gtgccgccgg caaaacccgc gccgtatccg ctggagatcg acttcagcgt cactggcgaa
     1081 tagcggacgg acaccgctgg cccgcgcacg cggcgggcgc ggcgtcccgg atttggacgg
     1141 ctacttcgcc ttgccctggt tggcgacggc cgcggtcttc gcggcgatcg ccgcggcgtc
     1201 gcccaggtag tagtggcgct gcggcaccag cgcgtcgtcg aactcgtaga ccagcggcac
     1261 gccgttgggg atgttgagct cgacgatgtc ggcatcggaa atgccgtcga ggtacttcac
     1321 cagcgcgcgc agcgaattgc cgtgcgcggc caccaccacg cgctggccgg cgctgatcgc
     1381 cggggcgagc acctcgtgcc agtacggcag cacgcgggcc acggtgtcct gcaggcattc
     1441 ggtgtcggga atctgcgccg gcgcgaggcg cgcgtagcgc gggtcgctgc gcgacgggtt
     1501 cgcggcgtga tccatcggcg gcggcggcac gtcgtagctg cggcgccaga tcttcacctg
     1561 ggcgtcgccg tacttctgcg ctgtctcggc cttgttgagg ccggtcaggc cgccgtagtg
     1621 gcgctcgttc aagcgccagt cggtgtgcac cggcagccac atcaaatcca tcgcatcctg
     1681 cacgtgccac agcgtgcgcg cggcgcgctt gagcaccgag gtgtgcgcca cgtcgaacgc
     1741 gtagccctcg cgcttcaaca gctcacccgc ctcgcgcgcc tcggtcacgc cctgcggcgt
     1801 gagatccacg tcggcccagc cgctgaagcg gttttcgagg ttccactgcg actggccgtg
     1861 gcggatcagg acgagcttgt gcatggcgat ggtttctctc gtggggccga aactgcgatg
     1921 gtgcggcgcg gcaccgcgag cgtcaaatcc cgcgccgcca ttccgcgcat gcatgccgcc
     1981 caccagtgcg gcggctggcc agcgcgagcg cgcaaatcgg ggaggtggag ggtgcgacgg
     2041 tcgcgatggt gccggatggc gcgccgggaa cggtcgcttc cgcctgacgt cgccccgcag
     2101 cccgcgcgtt tcgtgacggc gcacacggcg ctccccgcct ggggcttgaa ccactccgct
     2161 gaagccgcgc cgcgcgggat ccccgttcgg atgggatcgg gcacaatcga tcggcatgcc
     2221 gcccgccgac cgcccgaccc accagaccct gctgcgtccg ctgctgaaga ccggcaagcg
     2281 cgacgtgccg tgggcggtgg ccgcgcgcaa caccgcggcg atcgtgttgc cgctggtcgt
     2341 cggccagctg gccgggcagc tcggcgccgg gctcgcggtg ggcaccggcg ccctggtcac
     2401 gatgtttgcg g
//
LOCUS       DASSVL010000353         2253 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_318469, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000353 DASSVL010000000
VERSION     DASSVL010000353.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2253)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2253)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2253
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_318469"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..472)
                     /locus_tag="VFM52_06175"
     CDS             complement(<1..472)
                     /locus_tag="VFM52_06175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017460279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008703 -
                     5-amino-6-(5-phosphoribosylamino)uracil reductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrofolate reductase family protein"
                     /protein_id="HET8764787.1"
                     /translation="MRKLIVPAFISLDGVMQAPGGPQEDTSGGFAYGGWVWPFADDSG
                     EVMGGVFKQPFELLLGRRTYDIFAAYWPHVPADAPHRSLADQFNGTTKHVATHHPDTL
                     AWQHSRGLGPDIATAVRELKRGDGPDLVTQGSSDLVHQLLATDLVDELRLLVYPI"
     gene            complement(500..>2253)
                     /locus_tag="VFM52_06180"
     CDS             complement(500..>2253)
                     /locus_tag="VFM52_06180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008435196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="CocE/NonD family hydrolase"
                     /protein_id="HET8764788.1"
                     /translation="MRDGVKLYTVIWVPKGAKDAPIILTRTPYNAAKRERGENPTLLA
                     SLPLADEPFAEAGYIRVYQDVRGKYGSDGAYLMTRPPRGPLNATSTDDTTDAFDTIDW
                     LVKHLPESNGKVGMIGSSYDGWTVAMALLDPHPALKVAAPESPMIDGWMGDDWYHYGA
                     FRLTNLDYFTHQMSIRGKGEGVPRGHYDDYTNFLEAGSASGWAVANGFDQLPWWHRFA
                     AHPAYDAFWQLQALDKLLVARPSTVPTMWLQGLWDQEDIYGAVHAWEALVEAGHGANN
                     HLVIGPWWHSQINRDGWNTGVLRWPGNTTAQFRREVMIPWFDHHLRGTPLPQPLPAAL
                     IYNPVAQRWDDFADWQPASQQTLTPLYLQDDLGLGFDAPAGGSDSYVADPAKPVPYLP
                     RPIPQNIDRWRTWLVEDQRFVVDRPDVLSYVTPILTETLIVQGAPIADLFARTTGTDA
                     DFVVKLIDVYPGTVPDDPPMGGYLFPVALDIFRGRYRESFSDPSPIPANAVQRYRFRL
                     PTVNHEFRPGHRIMVQIQSSLFPLYDRNPQTYVANILFAQPGDYQKATVTIEHGPEAR
                     SAVLLPLAARTAGKHGS"
BASE COUNT          345 a          690 c          824 g          394 t
ORIGIN      
        1 ggatcggata aaccagcagg cgcagttcgt cgacgaggtc cgtggcgagc agttggtgca
       61 cgagatcgct gctgccttgc gtgacgagat cggggccgtc gccgcgcttg agttcgcgca
      121 ccgcggtggc gatatccggg ccaaggccgc ggctgtgctg ccacgcgagc gtgtcggggt
      181 ggtgcgtggc gacgtgcttg gtggtgccgt tgaactggtc ggcaaggctg cggtgcggcg
      241 cgtcggccgg cacatgcggc cagtacgcgg cgaagatgtc gtaggtgcgg cgtccgagca
      301 gcaactcgaa cggctgcttg aacacgccgc ccatcacttc gcccgagtcg tccgcgaagg
      361 gccagaccca gccaccgtag gcgaagccgc cgctggtgtc ttcctgtggg ccaccgggcg
      421 cctgcatcac gccgtcgagg ctgatgaacg cgggaacgat gagcttgcgc atgcggggac
      481 tcctgcgtgg ggctagggat cacgatccgt gcttaccagc cgtccgcgcc gccagcggca
      541 gcagtacggc gctccgcgcc tccggcccgt gttcgatcgt gaccgtggct ttttggtagt
      601 cgcccggttg ggcgaacagg atgttcgcaa cgtaggtttg cgggttgcgg tcgtacagcg
      661 gaaacaggct cgactggatc tgcaccatga tccggtggcc gggccggaat tcgtggttga
      721 cggtcggcag gcggaagcgg taacgctgca ccgcgttcgc ggggatcggc gacgggtcgg
      781 agaaactttc gcggtagcgc ccgcggaaga tgtcgagtgc caccgggaac aggtagccgc
      841 ccatgggcgg atcgtcgggt accgtgccgg gatagacatc gatcagcttc accacgaagt
      901 cggcgtcggt gccggtggtg cgcgcgaaca ggtcggcaat cggcgcaccc tgcacgatca
      961 gggtttcggt gaggatgggc gtgacatacg agagcacgtc cggacggtcc accacgaaac
     1021 gctgatcctc gaccagccag gtgcgccaac ggtcgatgtt ctgcggaatg ggccgcggca
     1081 ggtaggggac gggtttcgcc gggtcggcaa catagctgtc gctgccgccg gcgggcgcgt
     1141 cgaaaccgag acccagatcg tcctgcagat aaagcggtgt cagggtctgc tggctcgcgg
     1201 gttgccagtc ggcaaaatcg tcccagcgtt gcgcgaccgg gttgtagatg agtgctgcgg
     1261 gcagcggttg cggcagcggc gtaccgcgca ggtggtggtc gaaccacggg atcatcactt
     1321 cgcggcggaa ctgcgccgtg gtgttgccgg gccagcgcag cacgccggtg ttccagccgt
     1381 cgcggttgat ctggctgtgc caccacggcc cgatcacgag gtggttgttg gcaccgtgcc
     1441 cggcttcgac cagggcttcc cacgcgtgga cggcgccgta aatgtcttcc tggtcccaca
     1501 ggccctgcag ccacatcgtc ggcaccgtgg atggccgcgc gaccagcagt ttgtccagcg
     1561 cctgcagttg ccagaacgcg tcgtacgcgg gatgcgcggc gaagcggtgc caccacggca
     1621 actggtcaaa accattggcg acggcccagc cgcttgcgga acctgcttcg agaaagttcg
     1681 tgtagtcgtc gtagtggccg cgcggcacgc cttcgccctt gccgcggatg ctcatctggt
     1741 gggtgaagta atcgaggttg gtcaggcgga aggcgccgta gtggtaccag tcgtcgccca
     1801 tccagccgtc gatcatcggg ctttccgggg cagcgacctt gagcgccggg tgcgggtcga
     1861 gcaatgccat cgcgaccgtc cagccgtcgt aggacgagcc gatcatgccg accttgccgt
     1921 tgctctcggg cagatgtttc accagccagt cgatggtgtc gaaggcgtcg gtggtgtcgt
     1981 cggtcgaggt cgcgttgagc gggccgcgcg gcggccgcgt catcagatag gcgccgtccg
     2041 agccgtactt gccgcgcacg tcctggtaga cgcggatgta gccggcctcc gcgaacggct
     2101 cgtcggccag gggcagggag gccagcaggg tcgggttctc cccgcgctcg cgcttggcgg
     2161 cgttgtaggg cgtgcgcgtc aggatgatcg gcgcgtcctt cgcccccttg gggacccaga
     2221 tcaccgtgta gagcttcacc ccgtcgcgca tcg
//
LOCUS       DASSVL010000354         3759 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1406303,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000354 DASSVL010000000
VERSION     DASSVL010000354.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3759)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3759)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3759
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1406303"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1073)
                     /locus_tag="VFM52_06185"
     CDS             complement(<1..1073)
                     /locus_tag="VFM52_06185"
                     /EC_number="4.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007509958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004333 - fumarate hydratase activity
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA];
                     GO_process: GO:0006106 - fumarate metabolic process
                     [Evidence IEA];
                     GO_process: GO:0006108 - malate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class II fumarate hydratase"
                     /protein_id="HET8764789.1"
                     /translation="MSGFRIEHDSMGELQVPAEALYGAQTQRAIDNFPISGQHLPREF
                     IRALGLVKVAAAEANLSLGYLKKGQAAAIRKAALAVAGGEYDAQFPIDIYQTGSGTST
                     NMNANEVIAHLAAAAGTKVHPNDHVNYGQSSNDVIPTTIRVSAALSAHEQLLPALKQL
                     KKAIDRRAHQLRNTAKTGRTHLMDAMPITFGQELSGWSAQIGSASARIEDALVRLRRL
                     PQGGTAVGTGINADPKFGAAVAVQLKKLTGVRFEAMAVPFEGMAAQDDAVELSGALKT
                     LAVALMKIANDLRWMNSGPLAGLGEIALPALQPGSSIMPGKVNPVIPEAVTMVAAQVI
                     GNDTAITVAGQAGNFQLNVMLPL"
     gene            1180..2547
                     /gene="purB"
                     /locus_tag="VFM52_06190"
     CDS             1180..2547
                     /gene="purB"
                     /locus_tag="VFM52_06190"
                     /EC_number="4.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015447442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004018 - N6-(1,2-dicarboxyethyl)AMP
                     AMP-lyase (fumarate-forming) activity [Evidence IEA];
                     GO_process: GO:0006188 - IMP biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate lyase"
                     /protein_id="HET8764790.1"
                     /translation="MSHHALTALSPLDGRYAGKVEALRPIFSELGLMHRRVHVEIEWL
                     LALGNEPGIAELPPFTATQVKHLHTIADSFAIEEGARVKAIEATTNHDVKAVEYFIKE
                     RIGADPALAQAREFVHFACTSEDINNLSYALMLKDAREHVLLPELDAIIATLRALAHE
                     HAALAQLARTHGQTASPTTLGKEFANVVARLERQRKLLAAVEVSGKINGAVGNYNAHA
                     IAYPDIDWRAFSRRFVESLGLAWNPYTTQIEPHDNIAEYCDAVRRANTILIDLARDIW
                     GYISEGYFTQTLKAGEVGSSTMPHKVNPIDFENAEGNFGLANAMLGHFADKLPISRWQ
                     RDLTDSTVLRALGVAFGHTLVAFASLRKGLGKLNVNAPRLAADLDASWEVLAEAVQTV
                     MRRYGLPQPYEQLKALTRGHGISKDSMRGFIASLALPAEAKQRLLELTPATYTGLAAS
                     LAKDI"
     gene            complement(2625..3566)
                     /gene="cysK"
                     /locus_tag="VFM52_06195"
     CDS             complement(2625..3566)
                     /gene="cysK"
                     /locus_tag="VFM52_06195"
                     /EC_number="2.5.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007805273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004124 - cysteine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006535 - cysteine biosynthetic process
                     from serine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine synthase A"
                     /protein_id="HET8764791.1"
                     /translation="MIYQSIVDTIGRTPVVRLHRLAPAHVELYVKVEAFNPAGSVKDR
                     LALAIILDAEQRGTLKPGQTVVESTSGNTGVALAAVCAARGYPFVAVLPDSFSIERRK
                     LIRAYGGKVLLTPAALRGSGASAKAEELAEKHGWFLANQFDNPANPAYHRQTTAAEIV
                     SDFAGRRLDYFVSGWGTGGTLTGVGEVLKVARPEVTVVGAEPAAASLLGGKPWASHKI
                     QGWTPDFLPKVLNPKVVDRIVTVDDLRARDTARELARQEGIFAGLSSGATLAAAIDVA
                     KEAPKGAAILAMLPDTGERYLSTFLFEGVNEGSDEVE"
BASE COUNT          587 a         1332 c         1259 g          581 t
ORIGIN      
        1 atcagcggca gcatcacgtt gagctggaag ttgccggcct ggccggcgac cgtgatcgcg
       61 gtgtcgttgc cgatcacctg cgcggccacc atcgtcacag cctcggggat caccgggttg
      121 accttgcccg gcatgatcga cgaccccggc tgcagcgccg gcagcgcgat ttcgccgagg
      181 ccggcgagcg ggccggagtt catccagcgc aggtcgttgg cgatcttcat cagcgccacg
      241 gcgagcgtct tcagcgcgcc ggaaagctcc accgcgtcgt cctgcgcggc catgccctcg
      301 aacggcaccg ccatcgcctc gaagcgcacg ccggtgagct tcttgagctg caccgccact
      361 gccgcgccga acttcggatc ggcattgatg ccggtgccga ccgcggtgcc gccctgcggc
      421 aggcggcgca ggcgcaccag cgcatcctcg atgcgcgcgc tggccgagcc gatctgcgcg
      481 gaccagccgg agagctcctg gccgaaggtg atcggcatcg cgtccatcag gtgcgtgcgg
      541 ccggtcttcg ccgtgttgcg cagctggtgc gcgcggcggt cgatcgcctt cttcaactgc
      601 ttcagcgccg gcagcagctg ctcgtgcgcg ctgagcgccg cgctgacgcg gatggtggtg
      661 gggatcacgt cgttcgagct ctgcccatag ttgacgtggt cgttcgggtg caccttggtg
      721 ccggccgcgg cggcgaggtg cgcgatcacc tcgttcgcat tcatgttggt gctggtgccc
      781 gaaccggtct ggtagatgtc aatcgggaac tgcgcgtcgt actcgccgcc ggccaccgcg
      841 agcgcggcct tgcggatcgc cgccgcctgg cccttcttca ggtagccgag cgagagattc
      901 gcctcggcgg ccgcgacctt gaccaggccg agcgcgcgga tgaactcgcg cggcaggtgc
      961 tggccggaaa tcggaaagtt gtcgatcgcg cgctgggtct gcgcgccgta caaggcttcg
     1021 gcaggtacct gcagctcgcc catgctgtcg tgttcaatgc ggaaaccgct catgctctca
     1081 acccttgcct tgagtgaagg aaaacctgcg gactataagg caagccgcgc gaaaccgccg
     1141 tcacgctaaa atgcgcgttc cctttgccgg aacgccgcca tgtcccacca cgccctcact
     1201 gccctgtcgc cgctggacgg ccgctacgcc ggcaaggtcg aggcgctgcg cccgatcttc
     1261 agcgagctgg ggctgatgca ccggcgcgtg cacgtggaga tcgaatggct gctggcgctg
     1321 ggcaacgagc cgggcattgc cgaactgccg ccgttcaccg ccacccaggt gaagcacctg
     1381 cacaccatcg ccgacagttt cgcgatcgag gaaggcgcgc gcgtcaaggc gatcgaggcg
     1441 acgaccaacc acgacgtgaa agccgtggag tacttcatca aggagcgcat cggcgccgac
     1501 ccggcgctgg cgcaggcgcg cgagttcgtg cacttcgcct gcaccagcga ggacatcaac
     1561 aacctgtcct atgcgctgat gctgaaggac gcgcgcgagc acgtgctgct gcccgagctg
     1621 gacgccatca tcgccacgct ccgcgcgctg gcgcacgagc atgccgcgct cgcgcagctg
     1681 gcgcgcacgc atgggcagac cgcctcgccc accacgctcg gcaaggagtt cgccaacgtg
     1741 gtcgcgcgcc tcgagcgcca gcgcaagctg ctcgcggcgg tggaggtttc cggcaagatc
     1801 aacggcgccg tcggcaacta caacgcgcac gccatcgcct accccgacat cgactggcgc
     1861 gcgttctcgc ggcgcttcgt ggaaagcctg ggcctcgcct ggaacccgta caccacgcag
     1921 atcgagccgc acgacaacat cgccgaatac tgcgacgccg tgcgccgcgc caacaccatc
     1981 ctgatcgacc tcgcgcgcga catctggggc tacatctcgg aaggctattt cacccaaacc
     2041 ctgaaggccg gcgaggtggg ttcctccacc atgccgcaca aggtcaaccc gatcgacttc
     2101 gagaacgccg aaggcaattt cggcctcgcc aacgccatgc ttggccactt cgccgacaag
     2161 ctgccgatca gccgctggca gcgcgacctg accgactcca ccgtgctgcg cgcgctcggc
     2221 gtcgccttcg gccacacgct ggtggcgttc gcctcgctca ggaagggcct cggcaagctc
     2281 aacgtcaacg cgccgcgcct ggccgccgac ctcgacgcca gctgggaagt gctggccgaa
     2341 gccgtgcaga cggtgatgcg ccgctacggc ctgccgcagc cctacgaaca gctcaaggcg
     2401 ctgacccgcg ggcacggcat cagcaaggac tcgatgcgcg gcttcatcgc cagcctcgcc
     2461 ttgccggccg aggcgaaaca gcgcctgctg gagctgacgc cggccaccta caccggtctc
     2521 gccgccagtc tcgccaaaga catctgacgc gcgtcagatc gcgcatgcgg gcgggccggc
     2581 atgcctgccg gcccgtccgt ttcttcagcc gccgcgaggg aacctcattc cacctcgtcc
     2641 gagccttcgt tgacgccctc gaacaggaac gtggagagat accgctcgcc ggtatccggc
     2701 agcatggcga gaatcgccgc gcccttcggc gcctccttgg cgacgtcgat cgcggcggcc
     2761 agcgtggcgc cggacgacag gccggcaaag atgccttcct gccgcgccag ctcgcgcgcc
     2821 gtgtcgcggg cgcgcaggtc gtccaccgtc acgatgcggt cgaccacctt ggggttcagc
     2881 accttgggca ggaaatccgg cgtccagccc tggatcttgt gcgaagccca cggcttgccg
     2941 ccgagcagcg acgcggccgc cggctccgcg ccgacgaccg tcacctcggg tcgcgccacc
     3001 ttgagcactt cgcccacgcc ggtgagcgtg ccgccggtgc cccagccgct gacgaaatag
     3061 tccagccggc ggccggcgaa atcgctgacg atctcggccg ccgtggtctg ccggtggtac
     3121 gccgggttcg ccgggttgtc gaactggttg gcgagaaacc agccgtgctt ctcagccagt
     3181 tcctcggcct tcgccgatgc gccgctgccg cgcagggcgg ccggcgtgag cagcaccttg
     3241 ccgccgtagg cgcggatcag cttgcggcgc tcgatggaga aggaatccgg cagcaccgcc
     3301 acaaacgggt agccgcgcgc ggcgcacacc gccgccagcg ccacgccagt gttgcccgaa
     3361 gtggactcca ccacggtctg gccgggtttc agcgtgccgc gctgctcggc gtcgagaatg
     3421 atcgccagcg ccaggcggtc cttgaccgag ccggcggggt tgaaggcttc cactttcacg
     3481 tacaactcga cgtgggccgg cgcgagccgg tgcaggcgga cgaccggcgt gcggccgatg
     3541 gtgtcgacga tgctctggta gatcatgggc ggtccttggt gacaggtgga cagggtgtcg
     3601 cggggatcgg ggatgactcg gggctgcggc gtcaggccgg acaggaggca atctcgtcga
     3661 tggccggtcg ccgccgcacg ccacggggtt cgcctgcggg ccggttcggg ccgtcgatcg
     3721 gcggtgcgcc gaaccacgcc agttcggtgg caaggctcg
//
LOCUS       DASSVL010000355         2243 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_869714, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000355 DASSVL010000000
VERSION     DASSVL010000355.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2243)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2243)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2243
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_869714"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..243)
                     /locus_tag="VFM52_06200"
     CDS             complement(<1..243)
                     /locus_tag="VFM52_06200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8764792.1"
                     /translation="MNAADRRRLTPALGIVAAILVVLLIALWAGLGDGATWNDHAAPA
                     RLPSVGATTPAPAVPPLDRYAEVWQHPLFSPTRTPAP"
     gene            complement(240..824)
                     /gene="gspM"
                     /locus_tag="VFM52_06205"
     CDS             complement(240..824)
                     /gene="gspM"
                     /locus_tag="VFM52_06205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007806832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein GspM"
                     /protein_id="HET8764793.1"
                     /translation="MKSRIARRLSPAQSRLVAIGLALVALAIAYFVLLHWWFVAPLLR
                     VDGQMRDLQGIHAKYAAAIAEQPELRKRVAKLEQGGASVDAFLSANDPSAAAANLIQR
                     ATDVVAAHAHEDSGCSMPSKMPIERDTGNEPFRRVSVSITLDCGMQPLAAVLHDFDRG
                     LPYLFVDNLTVARSPSGRLQAQLTLSGYLRPASP"
     gene            complement(826..1953)
                     /locus_tag="VFM52_06210"
     CDS             complement(826..1953)
                     /locus_tag="VFM52_06210"
                     /inference="COORDINATES: protein motif:HMM:NF016992.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilN domain-containing protein"
                     /protein_id="HET8764794.1"
                     /translation="MATASAQTLERAKLAWRRSPLPGFLRWWGAELTALLPAGVRAWV
                     RRGPDVLWLGEAGGNATVRRARTGAMLAAIGPELPVDVQRTEFARACAGIDPDDRCLL
                     LVVPASQVLHRRLLMPAAAAADPRRVVGYELDRQTPFKPEQVYYAVSVSADSAPAGQV
                     ALDLYAAPKAEIDPLLERFNAIGAQPDAVDVQTARGTLAGIDLMPPEQRPRHIDRRGR
                     ANFILGLVCILLVVLVLSQWLANRRAALAEMQDEVQAMRARATQSEQLRAQLTGALAA
                     SKFLVKRKSENPSALAVLDDLTRRLPATAWLDVLTLDDSGGLDIKGEAAKAAALVDTL
                     GSSKLLQEPKLQGVIQPDPATGKERFEMVARVRQQGAVDGR"
     gene            complement(1986..>2243)
                     /locus_tag="VFM52_06215"
     CDS             complement(1986..>2243)
                     /locus_tag="VFM52_06215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8764795.1"
                     /translation="LGPDQAKTMVAQRQRRPAQRGAGNGRALGAVANGPLVAGYGGVV
                     GRVFSTATMPDGTRVGLDVTLRLALTGTRARPYKVLDWRVD"
BASE COUNT          354 a          820 c          742 g          327 t
ORIGIN      
        1 gggcgcgggc gtgcgggtag ggctgaacaa ggggtgttgc cagacttccg cataccggtc
       61 cagaggcggt accgccggtg ccggtgtggt ggcgccgacc gatggcagac gcgccggcgc
      121 ggcatggtcg ttccaggtcg caccgtcgcc gaggcccgcc cacaaggcga tcagcaacac
      181 caccaggatc gcggcgacga tgcccaacgc gggcgtgagg cggcggcgat cggcggcgtt
      241 catggcgacg cgggcctcag gtacccggac aaggtcagtt gcgcctgcaa ccggccgctc
      301 ggcgaacgtg ccacggtcag gttgtccacg aacagatacg gcaagccgcg atcgaaatcg
      361 tgcagcaccg ccgccagcgg ctgcatgccg caatcgagcg tgatgctgac gctgacccgc
      421 cggaacggct cgttgccggt gtcgcgttcg atcggcatct tggacggcat gctgcagccg
      481 gaatcctcgt gcgcgtgcgc ggcgaccacg tcggtggcgc gctggatcag gttcgcggcc
      541 gcggcgctgg gatcgttcgc ggacaagaac gcgtccaccg atgcgccgcc ttgttccagc
      601 ttggcgacgc gctttcgcag ttccggctgc tcggcgatcg ctgccgcata cttcgcgtgg
      661 atcccctgca ggtcgcgcat ctgcccgtcc acccgcagca gcggcgcgac gaaccaccag
      721 tgcagcagca cgaaataggc gatcgccagc gcgaccagcg ccaacccgat cgcgaccagc
      781 cgcgactgcg caggcgacaa ccgtcgcgcg atgcggcttt tcacgtcaac ggccatcgac
      841 ggcaccctgc tggcgcaccc gcgcgaccat ctcgaagcgt tccttgccgg tcgcgggatc
      901 gggctggatc acgccctgca gcttgggttc ctgcaacagc ttcgaactgc ccaaggtatc
      961 gaccagcgcc gccgccttgg cggcttcgcc cttgatgtcg aggccgcccg agtcgtccag
     1021 cgtcagtacg tccagccacg ccgtggcggg caagcgccgg gtcaggtcgt ccagcaccgc
     1081 cagcgcggat ggattttccg acttgcgctt caccaggaac ttcgaggccg ccagcgcgcc
     1141 cgtgagttgc gcgcgcaact gttccgattg cgtggcccgg gcgcgcatcg cctgcacttc
     1201 gtcctgcatt tcggccagcg cggcgcgacg attggccagc cactgcgaca acaccagcac
     1261 caccagcaat atgcaaacga gacccaggat gaagttcgcg cgaccgcggc gatcgatgtg
     1321 gcgcggccgc tgctccggcg gcatcaggtc gatgccggcc agcgtgccac gggcggtctg
     1381 cacgtcgacc gcatcgggct gcgcgccgat cgcgttgaag cgttccagca agggatcgat
     1441 ctccgccttc ggcgccgcgt agagatccag cgccacctgt ccggccggtg ccgaatcggc
     1501 actgacgctg acggcgtaat acacctgctc gggcttgaac ggcgtctgcc ggtccagctc
     1561 gtaaccgacc acccggcgcg gatcggcggc tgccgccgcg ggcatcaaga ggcgccggtg
     1621 caacacctgg gaagccggca ccaccagcag caggcagcga tcgtccggat caatgccggc
     1681 gcacgcccgc gcgaattccg tgcgctgcac gtccaccggc agctcaggtc cgatcgcggc
     1741 cagcatggcg ccggtgcgcg cgcgccgcac cgtcgcattg ccgcccgctt cgcccagcca
     1801 caacacgtcc ggcccgcggc gcacccatgc acgcacgccc gcaggcagca aggccgtcaa
     1861 ttcagcaccc caccagcgca ggaagccggg cagtggcgaa cgtcgccacg ccagtttcgc
     1921 gcgttcgagg gtttgtgcgc ttgctgtcgc cattgcttgc cggccccgcc aggaaacgcg
     1981 tggaatcaat ccacgcgcca gtccaatact ttgtacgggc gtgcccgggt gcccgtcaac
     2041 gccaagcgta gcgtgacatc cagccccacg cgcgttccgt cgggcatcgt ggcggtgctg
     2101 aacacgcgcc cgaccacccc gccgtaaccc gccaccagcg gtccgttggc caccgcaccc
     2161 agggcgcgcc cgttgcccgc gccgcgctgc gccggccggc gttggcgttg cgcgaccatc
     2221 gtcttcgcct ggtcgggccc aag
//
LOCUS       DASSVL010000356         5204 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_559201, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000356 DASSVL010000000
VERSION     DASSVL010000356.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 5204)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5204)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5204
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_559201"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..886
                     /locus_tag="VFM52_06220"
     CDS             <1..886
                     /locus_tag="VFM52_06220"
                     /inference="COORDINATES: protein motif:HMM:NF014207.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="flagellar hook-length control protein FliK"
                     /protein_id="HET8764796.1"
                     /translation="AAGSVAAPAPAPPRAQDAPADEEGAAALAGAMLAMLGQVNGVVP
                     TARPAAPGTGVPAAGGDRTAPTGAPQGALLDTLAADAKSTSGAASNAAANAAVVAAPT
                     MAGGPVAPAPNFAAMLAGSGVPQAATDAPKDTALQALALATAPLAPSPAPPLPALQVM
                     TPPGQPGFANELGQQVIWLGRQDIQSAKIRLHPEDLGTLDVHLDLSHDRVDVVFAAQH
                     PAAVAAVQQSLPQLQQMLAQHGLALGHAEVGQQQQGNAHAHGHRHAAAAPEDRGEVAA
                     IGSVPVASSQVGLLDAFA"
     gene            1132..1638
                     /locus_tag="VFM52_06225"
     CDS             1132..1638
                     /locus_tag="VFM52_06225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015448499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009425 - bacterial-type flagellum basal
                     body [Evidence IEA];
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA];
                     GO_process: GO:0071973 - bacterial-type
                     flagellum-dependent cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body-associated FliL family
                     protein"
                     /protein_id="HET8764797.1"
                     /translation="MAAEKPAAEEGAVAAPVKKKSKLPLILIVAVVLLAAGGGASWLL
                     LGHKGNHGNAEGPKVELSKADLYLPLDPPFVVNFEDGQSLRYLQVGITLMSHDPKAID
                     AAKGADPVIRNALVALLSNQQFAFLSTSAGRQKLQGEALAAVQKVVRDRLGRPGIEAL
                     YFTSYVMQ"
     gene            1655..2686
                     /gene="fliM"
                     /locus_tag="VFM52_06230"
     CDS             1655..2686
                     /gene="fliM"
                     /locus_tag="VFM52_06230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008439169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009288 - bacterial-type flagellum
                     [Evidence IEA];
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor switch protein FliM"
                     /protein_id="HET8764798.1"
                     /translation="MSDLLSQDEIDALLDGVTDGGVETSTDQPPPKDAVISYDFTQQD
                     RIVRGRLPTLEMVNDRFARYFRTGIFNVLRKTAEVSVLGVKMVKFAEYVHGLVVPTNL
                     NLVRIKPLRGTALVVFEPRLVFTVIDNFFGGDGRFHARIEGRDFTPTENRVIQIMLDE
                     LFAAMREAWAPVLGLEFEYQSSEINPQFANIVSPTETVVVSTFHVELDGGGGEIHLTL
                     PYAMIEPIRTLLDAGVQSDRVDRDDRWAELLREEVLDAEVPISSELVEVEMTLGGFLH
                     LRPGDVIPIQLPEFATVFAEDVPMFRGSYGKSNGVNAVRFHTKVARHEVRLPTDSSHE
                     GSFPHEPVH"
     gene            2670..3017
                     /gene="fliN"
                     /locus_tag="VFM52_06235"
     CDS             2670..3017
                     /gene="fliN"
                     /locus_tag="VFM52_06235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008439167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009288 - bacterial-type flagellum
                     [Evidence IEA];
                     GO_function: GO:0003774 - cytoskeletal motor activity
                     [Evidence IEA];
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor switch protein FliN"
                     /protein_id="HET8764799.1"
                     /translation="MNQSTEAVAEAGGERVEFDALNAAPAAGGEVNLDMILDVPVTLA
                     MEVGRTRISIRNLLQLNQGSVVELDRSAGEPLDVFVNGTLVAHGEVVVINEKFGIRLT
                     DVISPAERVRKLR"
     gene            3229..3570
                     /gene="fliO"
                     /locus_tag="VFM52_06240"
     CDS             3229..3570
                     /gene="fliO"
                     /locus_tag="VFM52_06240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015448498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0044781 - bacterial-type flagellum
                     organization [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthetic protein FliO"
                     /protein_id="HET8764800.1"
                     /translation="MDVGGELVRVILSLVAVIALIFVAGWLSRRMQGRARAGGRRIRC
                     VESMAVGARDRVMLLDADGKRLLVGVGPGGMRTLHVYDGAAPADETPPPVLPAVPNFA
                     QLITRLRKPKP"
     gene            3567..4388
                     /gene="fliP"
                     /locus_tag="VFM52_06245"
     CDS             3567..4388
                     /gene="fliP"
                     /locus_tag="VFM52_06245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017463601.1"
                     /note="The bacterial flagellar biogenesis protein FliP
                     forms a type III secretion system (T3SS)-type pore
                     required for flagellar assembly; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar type III secretion system pore protein
                     FliP"
                     /protein_id="HET8764801.1"
                     /translation="MSARLRRFGLVLVLALLPLVAFGAPRAANAAASAPALSMPASPA
                     GIGSQGIPVLSVHDAPGGVKNWTLSLQMLALLTVLTLLPAIVLMMTSFTRIIIVLGFL
                     RQALGTQSTSPNQVLLGLSLFLTLFVMSPVLNQSYNQGVKPYMDGQLSAEQALPAATA
                     PFKRFMLDQTREADLGLFTKLSGNKPYASKADVPFTVAMPAFLTSELKTAFQMGFLLF
                     IPFLIIDLVVASVLMSMGMMMVSPSIISLPFKIMLFVLVDGWTLLLGTLAGSFYT"
     gene            complement(4909..>5204)
                     /locus_tag="VFM52_06250"
     CDS             complement(4909..>5204)
                     /locus_tag="VFM52_06250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8764802.1"
                     /translation="GFVPLARRAFLLRLAWHQSGFVPLTRRAFLLRLAPRQSGFVPLA
                     RRAFLLRLARHQSGFVRLAAAELLLFCLPKREVAKRKRHPGAALSVHPWTESP"
BASE COUNT          788 a         1771 c         1830 g          815 t
ORIGIN      
        1 cgccgccggc agtgtggcgg cgccggcacc ggcgccgccc cgtgcgcagg acgcgccggc
       61 cgacgaggaa ggcgcggccg cgctggccgg tgcgatgctg gcgatgctcg gccaggtgaa
      121 tggcgtggtg ccgacggccc gtccggctgc gcccggcacc ggcgtgccgg cggccggcgg
      181 cgatcggacc gcgccgaccg gcgcgccgca gggtgcgttg ctcgacacgc tcgctgcgga
      241 cgccaaatcg acgtccggcg cggcatcgaa cgccgccgcg aatgccgcgg tggtggctgc
      301 gcccacgatg gccggcggcc cggtggcgcc agcgccgaac ttcgcggcga tgctcgccgg
      361 gtccggcgtg ccgcaagccg cgaccgatgc cccgaaggac accgcgttgc aggcgctggc
      421 gctggccacc gcgcccttgg cgccatcgcc cgcgccgccg ctgccggcgc tgcaggtgat
      481 gacgccgccc gggcagcccg gcttcgccaa cgaactgggc cagcaggtga tctggctggg
      541 ccggcaggac atccagtcgg cgaagatccg cctgcatccg gaggatctcg gcacgctcga
      601 cgtgcatctc gacctgagcc acgaccgggt cgacgtggtg ttcgccgcgc agcatccggc
      661 cgcggtcgcc gccgtgcagc aaagcctgcc gcaactgcag cagatgctgg cccagcacgg
      721 cctggcgctg ggtcatgccg aggtgggcca gcaacagcag ggcaacgcgc acgcacacgg
      781 ccaccggcac gcagcggccg cgccggagga ccgcggcgaa gtggccgcca tcggcagcgt
      841 gccggtggcg agcagccagg tcggcctgct cgacgcgttt gcctgacgca cccgatgtcg
      901 tgaccggtcc cgcatcgccg ccgcaaggcg gcgatgccgt catggggccg ggacgatcgc
      961 tggcgcgacg ccggcttggc gggcgtcaag aaagcgccgg tcgccgcacc ggggtgtgcg
     1021 ccaccacgcg gggaagacgc tggcagccac gctttccacg cgtggcatgc ggcttgcatt
     1081 ccacgcaggg atgccacgtg cgtggcgtgt ttccgaccga caggagcttg catggccgcc
     1141 gagaagccag ccgccgaaga gggtgccgtc gcggcaccgg tgaagaagaa gtcgaagctg
     1201 ccgctgatcc tcatcgtggc cgtggtgctg ctggcggccg gcggcggcgc gagctggctg
     1261 ctgctgggtc acaagggcaa ccacggcaac gcggaagggc cgaaggtgga gctgtccaag
     1321 gccgatctct acctgccgct ggatccgccg ttcgtggtga atttcgagga cggccagtcg
     1381 ctgcgctacc tgcaggtggg catcaccctg atgtcgcacg atcccaaggc gatcgacgcg
     1441 gcgaagggcg ccgacccggt gatccgcaat gcgctggtcg cgctcctgag caaccagcag
     1501 ttcgcgttcc tgagcacctc ggccggtcgc cagaagctgc agggcgaagc gctggcggcg
     1561 gtgcagaagg tggtgcgcga ccggctcggc cggcccggca tcgaggcgct gtatttcacc
     1621 agctacgtga tgcagtgagc gcggaggcaa cgacgtgagc gacctgcttt cccaggacga
     1681 gatcgacgcg ctgctcgacg gcgtgaccga cggcggggtc gagaccagca ccgaccagcc
     1741 gccgccgaag gatgcggtga tctcgtacga cttcacccag caggaccgca tcgtgcgcgg
     1801 ccggctgccg acgctggaaa tggtcaacga ccgtttcgcg cgctacttcc gcaccggcat
     1861 cttcaacgtg ctgcgcaaga ccgccgaggt gtcggtgctc ggcgtgaaga tggtcaagtt
     1921 cgccgagtac gtgcacggcc tggtggtgcc gaccaacctg aacctggtgc gcatcaagcc
     1981 gctgcgcggc accgcgctgg tggtgttcga gccgcgcctg gtgttcaccg tgatcgacaa
     2041 cttcttcggc ggcgacggcc gcttccacgc gcgcatcgag ggccgcgact tcacgccgac
     2101 cgagaaccgc gtcatccaga tcatgctcga tgagctgttc gccgcgatgc gcgaggcgtg
     2161 ggcgccggtg ctcgggctcg agttcgagta ccagagctcg gagatcaacc cgcagttcgc
     2221 gaacatcgtg agcccgaccg agaccgtggt ggtgtcgacc ttccacgtcg agctcgacgg
     2281 cggcggtggc gagatccacc tcaccttgcc gtacgcgatg atcgagccga tccgcaccct
     2341 gctcgatgcc ggcgtgcaga gcgaccgcgt cgatcgcgac gaccgctggg ccgagctgct
     2401 gcgcgaggaa gtgctcgacg ccgaggtgcc gatcagctcc gagctggtcg aggtggaaat
     2461 gacgctgggc ggtttcctcc acctgcgccc tggcgacgtc atcccgatcc agttgcccga
     2521 gttcgcgacc gtgtttgccg aggacgtgcc gatgttccgc ggcagctatg gcaagtccaa
     2581 cggcgtgaac gccgtgcgtt tccacaccaa ggtggcgcgc cacgaagtgc gcctgcccac
     2641 cgattcgtct cacgaaggga gcttcccgca tgaaccagtc cactgaagcc gtggccgaag
     2701 ccggcggcga gcgtgtcgaa ttcgatgcgc tgaatgccgc accggcggcc ggcggcgagg
     2761 tcaatctcga catgatcctc gatgtgccgg tgacgctggc gatggaagtc gggcgcacgc
     2821 gcatcagcat ccgcaacctg ctgcagctca accagggttc ggtggtggag ctcgaccgct
     2881 ccgccggcga gccgctcgac gtgttcgtca acggcacgct ggtcgcgcac ggcgaggtgg
     2941 tcgtcatcaa cgagaagttc ggcatccggc tgaccgacgt gatcagcccg gccgagcgcg
     3001 tgcgcaagct gcggtgatcg ggtcgtgatc cggggttcgg aattcgggat gtggttttcg
     3061 cgcgctcacc gcacgatggg tcgagtgtgc ttgtcgccga cggcgagacg ggcaagccgc
     3121 ggcagcgatg aaattccatc gccgtcggcg ctgccttgct gcggcagcca atcgattacg
     3181 cgccggctga tatcggcgct ggcgccggcc gcgctgccgg ccaccgacgt ggacgtcggc
     3241 ggcgagctgg tgcgggtgat cctgagcctc gtcgcggtga tcgcgctgat cttcgtcgcc
     3301 ggctggctca gccggcgcat gcagggccgc gcgcgcgccg gcgggcggcg catccgctgc
     3361 gtggaatcga tggcggtcgg tgcgcgcgat cgggtgatgc tgctcgacgc cgacggcaag
     3421 cgcctgctgg tcggcgtcgg tcccggcggc atgcgcacgc tgcatgtcta cgacggcgcg
     3481 gcgccagccg acgagacgcc gccgcccgtg cttcccgcgg tgccgaattt cgcccagctc
     3541 atcacccgcc tgcggaagcc gaagccatga gcgcgcgcct gcggcgtttt ggcctcgtcc
     3601 tcgtgctggc gctgttgccg ctggtggcgt tcggcgcgcc gcgagcggcc aacgccgcgg
     3661 ccagcgcgcc ggcgctgagc atgccggcca gcccggccgg catcggcagc cagggcatcc
     3721 cggtgctgag cgtgcatgac gcgcccggcg gggtgaagaa ctggacgctc tcgctgcaga
     3781 tgctggcgct gctcacggtg ctgacgctgc tgccggcgat cgtgctgatg atgacctcgt
     3841 tcacccgcat catcatcgtg ctcggctttt tgcgccaggc gctgggcacg cagtccacgt
     3901 cgccgaacca ggtgctgctc gggctctccc tgttcctcac cctgttcgtg atgtcgccgg
     3961 tgctgaacca gtcctacaac cagggcgtga agccgtacat ggacggccag ctctccgccg
     4021 agcaggcgct gccggcggcc accgcgccgt tcaagcgctt catgctcgac cagacccgcg
     4081 aggccgacct cggcctgttc accaagctct ccggcaacaa gccctacgcg agcaaggccg
     4141 acgtgccgtt caccgtggcg atgccggcgt tcctcacctc ggaactcaag actgcgttcc
     4201 agatgggctt cctgctgttc atcccgttcc tgatcatcga cctcgtcgtc gccagcgtgc
     4261 tgatgtcgat gggcatgatg atggtctcgc cctcgatcat ctcgctgccg ttcaagatca
     4321 tgctgttcgt gctggtggac ggctggacac tgctgctggg gacgttggcg ggcagcttct
     4381 acacgtgatg gggatgggct gcttgcgcag ctcttgtgtt ttgcgatggc tgtctccgca
     4441 gttgccgcta catcagagcg gtttcgtgcc gctgacgcgg cccgagttac ttctcttttg
     4501 cttgcccaaa agagaagtaa ccaagagaaa acggcacccc gatggcgcgc cctccgggca
     4561 tcctgccctg cgggtgcgcg ggtgggctgc ggggttttcc ggcggcacct ccgtgtgccg
     4621 tcggaaaact ggcccgcatc catgcgggcc atcctgcgga ctatccgcat cccacccgcc
     4681 gcgccacagg ggccccaccg gcaggcgcgc gtccgcgcgc ccaagggcaa aagcggcgca
     4741 tgaatcggtt gttgccgttg cgtctggcgc gcaggaggcg cgcccggctc ggtggggccc
     4801 ctgggcggcg gtgaggtggg gacgatcagg ccgcgtagcg ggcgaggcca aggatggcct
     4861 cgccttttcg accgggcagg atgcccggcc gaaaagcccg gccacgcctc acggactttc
     4921 cgtccacgga tggacggaaa gcgctgcccc ggggtgccgt tttctcttgg ctacttctct
     4981 tttgggcaag caaaagagaa gtaactcggc cgccgccagg cggacgaaac cgctctgatg
     5041 ccgtgctaat cgcaaaagaa acgcgcgccg cgccagcggc acgaagccgc tctgacgtgg
     5101 tgcgagtcgc aaaagaaacg cgcgccgcgt cagcggcacg aaaccgctct gatgccatgc
     5161 tagtcgcaaa agaaacgcgc gccgcgccag cggcacgaaa ccgc
//
LOCUS       DASSVL010000357         2383 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1265393,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000357 DASSVL010000000
VERSION     DASSVL010000357.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2383)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2383)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2383
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1265393"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..288
                     /locus_tag="VFM52_06255"
     CDS             <1..288
                     /locus_tag="VFM52_06255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018974772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter associated domain-containing
                     protein"
                     /protein_id="HET8764803.1"
                     /translation="DEHDDEDEPAQIVAQPDGAWLVSALTPIEDFNAELGATFSDEEF
                     DTIGGLVTAQFGHLPEVGEDAAAGDFRFHVTAADDRRVQQFRVTRDAPALS"
     gene            341..1552
                     /locus_tag="VFM52_06260"
     CDS             341..1552
                     /locus_tag="VFM52_06260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008439051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4105 domain-containing protein"
                     /protein_id="HET8764804.1"
                     /translation="MTRLIRRLVACLLLGWLLVPGAHASVANAPGANLEVYLVTYGPG
                     DVYWERFGHDALELRDAVSGEAINFNYGMFDFNEKNFFLNFARGRMHYLMDAEPTEPE
                     EADYVAIGRSITRQRLALTAQQAGALRDFLFWNLRPENAGYPYDYYVDNCTTRVRDAL
                     DKALGGVIEKTLIVQPGGMTYRQQTDRLMRAQPWLMLVLDLGLGPYADQPLNGWSESF
                     LPEVLQHRLRDVRVPDDHGGSQPLVASEQLLSPSHITAPPAIAPDLRLPLGAAGLAFA
                     LVLAACARWWRTGHALLATAYLVAAGLVGVILIMLWTLTAHHSAWANANLLLFSPLAF
                     FLPRAVWHASRGLAPSRLANAAITLQLIAVLAAIALHALPGTVQQNQPWIGFALPVWL
                     ALAWGLRRAPA"
     gene            complement(1563..2321)
                     /locus_tag="VFM52_06265"
     CDS             complement(1563..2321)
                     /locus_tag="VFM52_06265"
                     /inference="COORDINATES: protein motif:HMM:NF039218.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SGNH hydrolase domain-containing protein"
                     /protein_id="HET8764805.1"
                     /translation="MGCDDWYHSDRVRICAFGPADAAHVAVLMGDSHAGQWFPAVAAA
                     FDRPGWRLLVLTKSSCPMVDEPIFYARIGREYTECATWRKAALAQVAALKPEVLILGS
                     TRYGFGKDQWIDGTRRVLDEVSPAVGHIYLLRDTPHLAFDGPDCLAEQAGRPAWLARR
                     STCYSRGVDPEAERVQQWIAQAARPFANVSVLDLDALVCPGGVCHAERHGLVVFRDAQ
                     HLTGSFAASLGPAFARMLGLPESATPPVVASTRR"
BASE COUNT          370 a          913 c          740 g          360 t
ORIGIN      
        1 gacgagcacg acgacgagga cgaaccggcg cagatcgtcg cgcagcccga cggcgcctgg
       61 ctggtcagcg cgctcacccc gatcgaggac ttcaacgccg agctcggcgc gacgttttcc
      121 gacgaggaat tcgacaccat cggcggcctc gtcaccgcgc aattcggcca ccttccggag
      181 gtgggcgaag acgccgccgc cggtgatttc cgcttccacg tcaccgctgc cgacgaccgc
      241 cgcgtgcagc agttccgggt gacgcgcgac gccccggcgc tgtcgtaagc cgcactcgtt
      301 ccgcatgtac cacgccaccg cggcagaccc cggtttcgcc atgacccgcc tgatccggcg
      361 cctcgtcgcg tgcctgctgc tggggtggct gctcgtgccg ggcgcacatg cgagcgtcgc
      421 caacgcgccc ggcgccaacc tcgaggtgta cctcgtcacc tacggccccg gcgacgtgta
      481 ctgggagcgc ttcggccacg acgcgctgga gttgcgcgac gccgtcagcg gcgaggcgat
      541 caacttcaac tacggcatgt tcgacttcaa cgagaagaac ttctttctca atttcgcgcg
      601 cggccgcatg cactacctga tggatgccga gccgaccgag cccgaggaag ccgactacgt
      661 cgccatcggc cgctcgatca cccgccagcg cctcgcgctc accgcgcagc aggccggcgc
      721 gttgcgcgat ttcctgttct ggaacctgcg cccggaaaac gccggctacc cgtacgacta
      781 ctacgtcgac aactgcacca cgcgcgtgcg cgacgcgctc gacaaggcgc tcggcggcgt
      841 catcgagaag acgctcatcg tccagcccgg cggcatgacc taccgccagc agaccgaccg
      901 cctgatgcgc gcgcaaccgt ggctgatgct ggtactcgac cttggccttg gcccgtacgc
      961 cgaccagccg ttgaacggct ggagcgaaag cttcctgccc gaggtgttgc agcaccggct
     1021 gcgcgacgtc cgcgtcccgg acgaccacgg tggcagccag ccgctggtgg ccagcgaaca
     1081 gctgctctcg cccagccaca tcaccgcacc gccagctatc gcgcccgacc tgcgcctgcc
     1141 gcttggcgcc gccggccttg ccttcgcgct ggtgctggcg gcctgcgcgc gctggtggcg
     1201 caccggccac gcgctgctcg ccaccgccta cctcgtcgcc gccggcctcg tcggcgtgat
     1261 cctcatcatg ctgtggacgc tcaccgccca ccactccgcc tgggccaacg ccaacctgct
     1321 gctgttcagc ccgctcgcct tcttcttgcc gcgcgcggtc tggcacgcca gccgcggcct
     1381 cgctccctcg cgcctcgcca acgccgcgat cacgttgcag ctcatcgccg tgctcgccgc
     1441 catcgcgctg cacgcgctgc ccggcaccgt gcagcagaac cagccgtgga tcgggttcgc
     1501 cctgccagtg tggctggcgc tggcatgggg cctgcggcgc gcgccggcct gactccttcc
     1561 cgtcagcgcc tggttgacgc caccaccggc ggcgtcgccg actccggcaa cccaagcatc
     1621 cgggcaaacg cgggccccag cgaagccgca aagctgccgg tcagatgctg cgcatcgcgg
     1681 aacaccacca acccgtgccg ctccgcatgg cacacgccac cagggcacac cagcgcatcg
     1741 agatcgagca cactgacgtt cgcgaacggc ctggccgcct gcgcgatcca ttgctggacg
     1801 cgctcggcct ccgggtcgac tcccctgctg tagcaagtgg aacgccgcgc cagccatgcc
     1861 ggtcgtccgg cctgctcggc gaggcaatcc ggcccgtcga aggccaggtg cggcgtgtcg
     1921 cgaagcaggt agatatggcc gacggcaggg ctcacttcgt ccagtacgcg gcgtgtgccg
     1981 tcgatccact gatccttgcc gaatccatac cgggtgctgc ccaggatcag tacctccggc
     2041 ttcaatgcag caacttgtgc aagcgccgcc ttccgccagg ttgcgcactc ggtgtactcg
     2101 cggccgattc gggcgtagaa aatcggctcg tcgaccatcg gacacgacga cttggtgagc
     2161 accagcagcc gccagccggg acggtcgaac gccgccgcca ctgccggaaa ccactgcccg
     2221 gcgtggctgt cgcccatcag taccgcaacg tgagcggcat ccgccggccc gaacgcacaa
     2281 atccgcacgc ggtcgctgtg ataccagtcg tcgcagccca tgccgtagat cgccggtgca
     2341 tcgccgtggg cgcgcgcgta gcgctggaaa atcggcgact gca
//
LOCUS       DASSVL010000358         2353 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_587471, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000358 DASSVL010000000
VERSION     DASSVL010000358.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2353)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2353)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2353
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_587471"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..244)
                     /locus_tag="VFM52_06270"
     CDS             complement(<1..244)
                     /locus_tag="VFM52_06270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8764806.1"
                     /translation="MLGLAAGAAWMVTAMYLERSPGWLAFVAAGLLALATRRWLRRPG
                     RTAAALAMLATLLAALYFNVLLAAIRLAANFDLGLVD"
     gene            485..1042
                     /gene="sufT"
                     /locus_tag="VFM52_06275"
     CDS             485..1042
                     /gene="sufT"
                     /locus_tag="VFM52_06275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007080029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="putative Fe-S cluster assembly protein SufT"
                     /protein_id="HET8764807.1"
                     /translation="MSGFALSSEPVTLSRDCDAVMVPQGEEVTLPAGQIGYITQALGG
                     SFTVYVDGNLFRIAGDDADALGKDKPEPLTVPENATNADVEKLCWTQLHGVFDPEIPV
                     NVVDLGLVYDLSLEKRDDGQRRVYVKLTLTAPGCGMGDILVDDARTNLLMIPTVVEAD
                     VDLVFDPPWNHTMMSEEAKLETGML"
     gene            1236..1898
                     /locus_tag="VFM52_06280"
     CDS             1236..1898
                     /locus_tag="VFM52_06280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007508500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HET8764808.1"
                     /translation="MRLLIVEDSPTLGPDLRVALARDGHAVDLAVDGAQALAFVATYA
                     YDVVVLDLMLPKVDGWSVLQRIRQGEGGPGVLVLSARDQVADRVEALNLGADDYLVKP
                     FAYDELLARVAAISRRGQTQPPLLRAGSLEVDPRARLARVDGQVLALTPKEYALLEAL
                     LGQRGTVLARGELFERLYDARSEASDKVIEVLVSTLRAKLARAGLPELIETRRGYGYV
                     VA"
     gene            1885..>2353
                     /locus_tag="VFM52_06285"
     CDS             1885..>2353
                     /locus_tag="VFM52_06285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8764809.1"
                     /translation="MSLRNWLFGSIHGRLLLTLCVGLGLLMAAMFVALDHSIDRKIYQ
                     QLDDDLLQRGRGVAALLETPPLDVAMARLQTMHPAYAGGHTEYLQVWDAAGRTLAVSG
                     SNVAGRLELPSGVEANRPLFYDLALPDHHRGRAVALQLRFPGVSGPATLAVAEE"
BASE COUNT          355 a          768 c          871 g          359 t
ORIGIN      
        1 cgtcgaccag gcccaggtcg aagttggccg cgagccggat cgccgccagc agcacgttga
       61 aatacagcgc ggcgagcagg gtcgcgagca tggccagtgc ggcggcggtg cggcccgggc
      121 ggcgcagcca ccggcgggtc gccagcgcca gcaggccggc ggcgacaaat gctagccagc
      181 ccggggagcg ctccaggtac atcgcggtga ccatccacgc ggcgcccgcg gccagcccga
      241 gcatggcggc actgaacaac gcgaggatga agccggccgc cgcacgggcg gtcggaacgg
      301 aaggctggaa ggcgggaggc aaggcgttga tcagcggaag cggaagcgcc gatcatagct
      361 gcttgcatcg cccggctgcg tcggcgcgcc tgatctggga caggcatgcg gcgacgtgct
      421 gcgacataat cgcttctctg cgcacggtgc gtggcacggt cattcgacaa aaggtggatg
      481 cggcatgagt ggatttgcgc tgagcagcga accggtgacc ctttcgcgcg actgcgatgc
      541 ggtgatggtg ccgcagggcg aagaggtgac gctgccggcc ggccagatcg gctacatcac
      601 gcaggcgctc ggcggcagct tcacggtgta cgtcgacggc aacctgttcc gcattgccgg
      661 cgacgatgcc gacgcgctgg gcaaggacaa gcccgagccg ctcacggtgc cggagaacgc
      721 gaccaacgcc gatgtcgaga agctgtgctg gacccagctg catggcgtgt tcgatcccga
      781 gatcccggtg aacgtggtgg atctcggcct ggtctacgac ctgagcctcg aaaagcgcga
      841 cgacggccag cgccgggtct acgtcaagct cacgctgacc gcgcccggct gcggcatggg
      901 cgacatcctg gtcgacgatg cgcgcaccaa tctgctgatg atcccgaccg tggtcgaggc
      961 cgacgtcgac ctggtgttcg atccgccgtg gaaccacacc atgatgtcgg aagaagccaa
     1021 gctcgaaacc gggatgctct gatgctctga gccgcgcggc gcgcggggtg gcgccacggg
     1081 cgatgccgag gcgcaatggc ggcgggccgg gtttccgact tgccctatga tcgccgcatg
     1141 attcccggat cgtcatcgca gcgccgatcc ccgcgggatg ccggcgtgcc gggttccgcc
     1201 ggctccggtg tgccgtcgtt tcggcgggtg gcctcgtgcg gctgttgatc gtcgaggatt
     1261 cgcccacgct ggggccggac ctgcgcgtcg cgctcgcccg cgacgggcat gcggtggacc
     1321 ttgccgtcga cggcgcgcag gcgctggcgt tcgtcgcgac ctacgcctat gacgtggtgg
     1381 tgctcgacct gatgctgccg aaggtcgacg gatggtcggt gctgcagcgg atccgccagg
     1441 gggaaggggg ccccggcgtc ctggtgctgt ccgcacgcga ccaggtggcc gaccgggtgg
     1501 aggcgctcaa ccttggcgcc gacgactatc tggtgaaacc cttcgcctac gatgaactgc
     1561 tggcgcgcgt cgccgccatt tcccggcgcg ggcagacgca gccgccactg cttcgcgccg
     1621 gctccctgga agtggacccg cgggcgcggc tggcgcgggt cgatggccag gtgctggcgt
     1681 tgacgcccaa ggagtacgcg ctgctggaag ccttgctcgg ccagcgcggg acggtgctgg
     1741 cgcgcggcga gctgttcgag cgcctgtacg acgcgcgcag cgaggcttcc gacaaggtga
     1801 tcgaggtgct ggtgagcacg ctgcgcgcca agctggcgcg cgccggattg ccggagctga
     1861 tcgaaacccg ccgcggatac ggttatgtcg ttgcgtaatt ggctgttcgg ttccatccac
     1921 gggcgcctgc tgctcacgct gtgcgtgggg ctgggcctgc tgatggccgc catgttcgtc
     1981 gcgctcgacc acagcatcga ccgcaagatc taccagcagc tcgacgacga cctgctgcag
     2041 cgcgggcgcg gcgttgcggc actgctggaa accccgcccc tcgacgtggc gatggcgcgc
     2101 ctgcagacca tgcatcccgc gtatgccggc ggccacaccg aatacctgca ggtgtgggac
     2161 gcggcgggcc gcaccctggc agtgtccggc agcaacgtgg cggggcgtct cgaattgccg
     2221 tcgggcgtgg aggccaaccg gccgcttttc tacgacctcg ccctgcccga ccaccatcgc
     2281 ggtcgggcgg tggccttgca gctgcggttc ccgggggtga gcgggccggc cacgctggcg
     2341 gtggcggagg aac
//
LOCUS       DASSVL010000359         2534 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_375541, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000359 DASSVL010000000
VERSION     DASSVL010000359.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2534)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2534)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2534
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_375541"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1920)
                     /locus_tag="VFM52_06290"
     CDS             complement(<1..1920)
                     /locus_tag="VFM52_06290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007509906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS-domain containing protein"
                     /protein_id="HET8764810.1"
                     /translation="MLNVGWIVAAALMWLGLLFAVALYGERHAQVLHKRWAIVYGLSL
                     AIHCTSWTFYGTVTQASRSGWWLPPTFVGAILMYLLAADWLRRLVRMAHEYNAGSLAD
                     LIAARLGRHSGLAALVTAVMLIGMVPYVALQLKAVAMSYAVLSRGHVVGTPAWQDSAL
                     YVGLVMAVFTMLFGTRRAAATEHNRGLMLAVAFESVFKLGAMLALGVLLFVPMPPDTV
                     IGSLPPTADASGFPALILLGGPAMFTMPHQFHAGVVECRDDAHVRTARWVFPLYLLLI
                     SLPILPLARLGDHWLGPVGVTSDLYVLALPLAHGDRGLALVAFLGGLSAATSMVVIAT
                     LTLSLMVSNHFVAPLRVRAGWGRREQGDLRGAVLMQRRIAILAIVLLAWAYSRVLARS
                     DALADIGAISFSALAGLAPATLIAMYRPHVGARAVWAGLLVGVLVWFYALLPALFVPQ
                     PEWVRNGPLGVSWLAPAHLLGLDEWSRLTRAVVLSLVANVATTWLVARSRFAHPAPSA
                     GGDVGLPELRQLAGRFLPPAHVYRLFAGAAADGPAGTSRVAAVEHELAAVIGASSARL
                     LLDVMRHQGSRELAAVAEIVGEAAQDLRFNQRVLAAALASMSQGICVVDPQLRVVAWN
                     RPYERLFDYPPGLLVI"
     gene            complement(2210..>2534)
                     /locus_tag="VFM52_06295"
     CDS             complement(2210..>2534)
                     /locus_tag="VFM52_06295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007509908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005576 - extracellular region [Evidence
                     IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="PHB depolymerase family esterase"
                     /protein_id="HET8764811.1"
                     /translation="AKTGYLYVPPACANGKPCGLLVAFHGCKQDAATVGTAFVRDAGF
                     NRWADAYGVAVLYPQTRASFAPLNPQACWDWWGYSGADYATRDGAQLRWLVRTVHALG
                     LPVRP"
BASE COUNT          466 a          949 c          826 g          293 t
ORIGIN      
        1 gatgacgagc aggcccggcg ggtaatcgaa cagccgctca tagggccggt tccatgccac
       61 cacgcgcagt tgcggatcga ccacgcagat gccctggctc atgctcgcga gcgcggccgc
      121 cagcacgcgc tggttgaagc gcagatcctg cgccgcctcg ccgacgatct cggccacggc
      181 ggccagctcg cgcgagcctt ggtggcgcat cacgtcgagc agcaggcgcg ccgagctggc
      241 gccgatcacc gcggccagct cgtgctccac cgcagccacc cgcgacgtgc ctgccggccc
      301 gtccgccgcc gccccggcaa acagtcgata cacatgcgct ggcggcagga agcgccccgc
      361 caattggcgc aactccggca ggcccacgtc gccgcccgcg ctcggtgccg ggtgcgcaaa
      421 acgcgaacgc gccaccagcc acgtggtcgc cacgttggcc accaggctca gcaccacggc
      481 gcgcgtcagc cggctccact cgtccagccc gagcaaatgc gccggggcca gccacgacac
      541 cccgagcggt ccgttgcgca cccactccgg ctgcggcacg aacaacgccg gcagcaaggc
      601 gtagaaccac accaacacgc cgaccagcag cccggcccac actgcgcgtg caccgacgtg
      661 cgggcggtac atggcgatca gcgttgccgg agccagcccg gccagggcgg aaaacgagat
      721 cgcgccgata tccgcgagcg cgtcgctgcg cgccagcacg cggctgtatg cccacgccag
      781 gagcacgatc gccaggatcg cgatgcgccg ctgcatcagc acggcgccac gcaggtcgcc
      841 ctgctcgcgc cggccccaac cggcgcgtac ccgcagcggc gcgacgaaat ggttgctgac
      901 catgaggctc aaggtcagcg tcgcgatcac caccatgctg gtggccgcgc tgaggccacc
      961 gagaaacgca accagcgcca gcccgcgatc gccatgcgcc agcggcagcg ccagcacgta
     1021 caggtcggaa gtgacaccga ccggcccgag ccagtggtcg ccgagccgtg ccagcggcag
     1081 gatcggcagc gaaatcagca gcaggtacag cggaaacacc caccgcgccg tgcgcacatg
     1141 ggcgtcgtcg cggcactcga ccacccccgc atggaactgg tgtggcatgg tgaacatcgc
     1201 cggcccgcca agcaggatca gcgcagggaa accgctggcg tcggccgtcg gcggcaagct
     1261 gccaatcacg gtgtccggtg gcatcggcac gaacaacagc acgccgagtg ccagcatcgc
     1321 accgagcttg aacaccgact cgaacgccac cgccagcatc agcccacggt tgtgctcggt
     1381 cgctgccgcg cgacgagtac cgaacagcat cgtgaacacc gccatcacca gcccgacgta
     1441 caaggcgctg tcctgccacg ccggcgtccc caccacgtgt ccgcggctga gcaccgcgta
     1501 gctcatcgcc acggccttca gctgcaaggc gacgtacggc accatgccga tcagcatcac
     1561 cgccgtgacc aacgccgcca acccggaatg ccgcccgagc cgggccgcga tgagatcggc
     1621 cagcgagccg gcgttgtatt catgggccat gcgcaccagc cggcgcagcc aatccgcggc
     1681 aagcaggtac atcaggatcg cgccgacgaa cgtcggcggc agccaccagc ccgaacggct
     1741 ggcctgggtg accgtgccgt agaacgtcca cgaggtgcag tggatcgcca gcgacaggcc
     1801 gtacacgatc gcccaccgct tgtgcagcac ctgcgcatgc cgctcgccat acagcgccac
     1861 cgcaaacagc agccccagcc acatcagcgc cgcggcgacg atccagccga cgttcaacat
     1921 gggccggcgg cgcgcatgcc ggtgcgggac gtggagcaac gggcggatgg aagcttcatg
     1981 tccggtcgaa cgggctcgtg tgcagggcgg gaaagcctgg tggcgcagcg gcgcagtgga
     2041 atccttgcac agctcgcagc gctccgcggg gtgggattca ctccgacacc gcaggcttga
     2101 cgcacgggcg tcgtgggcga cgtcctgctg gaatgaatcc cgccctacaa cggcagcggt
     2161 gccccgccgt gggtcgggcc tcagcgcggc acccggcccg gaggcggttt cacggccgca
     2221 ccggcaaacc caacgcgtgc acggtgcgca ccagccagcg caattgcgcg ccgtcgcggg
     2281 tggcgtaatc ggcgccggaa tagccccacc agtcccagca tgcctgcggg ttcagcggtg
     2341 cgaagctggc acgcgtctgc gggtacagta ccgccacgcc gtaggcgtcg gcccagcgat
     2401 tgaacccggc atcccgcacg aaggcggtgc caaccgtcgc agcgtcctgc ttgcaaccat
     2461 ggaacgccac cagcaggccg cagggcttgc cgtttgcgca tgccggcggc acgtacaggt
     2521 aaccggtctt cgcc
//
LOCUS       DASSVL010000360         3940 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_573655, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000360 DASSVL010000000
VERSION     DASSVL010000360.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3940)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3940)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3940
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_573655"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..240)
                     /locus_tag="VFM52_06300"
     CDS             complement(<1..240)
                     /locus_tag="VFM52_06300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008208238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin"
                     /protein_id="HET8764812.1"
                     /translation="MSRLRIFDENHPANPIASWTDHADIKRELAKAGVRFEQWAANQP
                     IAPGASQEEVIAAYRADIDRLMREEGYQAVDVISLK"
     gene            complement(237..884)
                     /locus_tag="VFM52_06305"
     CDS             complement(237..884)
                     /locus_tag="VFM52_06305"
                     /EC_number="4.2.1.109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008208240.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0019509 - L-methionine salvage from
                     methylthioadenosine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylthioribulose 1-phosphate dehydratase"
                     /protein_id="HET8764813.1"
                     /translation="MSQQLPDSIPRAVFRACAEAIAHAAHEVAARGWTPATSSNFSMR
                     VDAAHAAITISGRDKGRLRADDIMLVDAAGNPVGTTARPSAETALHTQIYRRMPTAGV
                     VLHTHSHVQSVASRLYARAGAVRLQGWELQKAIAGTTTHADTLAIPVFPNTQHMPELV
                     AQVDAWLDAGKPLAAYLIDGHGLYTWGRDMAEAQRHLEALEFLLDCELDLRRLTP"
     gene            1049..1381
                     /locus_tag="VFM52_06310"
     CDS             1049..1381
                     /locus_tag="VFM52_06310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017461192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="high-potential iron-sulfur protein"
                     /protein_id="HET8764814.1"
                     /translation="MSHEENNESRRRFLKVAAGTTAAAVVLGGLPRMARSADLPHVTA
                     ADPTAKALDYIDDAGKTKNPKHKAGDDCANCQFYSGGATGYGPCALFPGKSVSAKGWC
                     VSHAPKAH"
     gene            complement(1772..3214)
                     /locus_tag="VFM52_06315"
     CDS             complement(1772..3214)
                     /locus_tag="VFM52_06315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015447351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HET8764815.1"
                     /translation="MFTQLFTRKTDFNGTGTHGVALQRTLGPWGLTALGIGAVIGGGI
                     FVITGQAAAEHAGPAIILAFVIAAICCSFTALCYAEFATRIPMSGSSYSYAYATLGEL
                     AAWFIGWNMVLEYGVSASAVAVSWTGYFTSLLDHMGLHLPGVLVNAPLAYKGGHLIAT
                     GALINLPAVLIVLALTWLCYIGIRESSGANLAMVTLKVGLIIIVIVAGWQYVNPHYWE
                     PFIPAQQGPEKYGWPGIMRAATLVFFAYIGFEATSTAAQEAKNPQRDLPIGTLVSLAI
                     CTVLYIGMAAVITGLLPFDQLGTSEPVVTAVKAHPELGWLRWIVEVGALIGLSSVVLV
                     MIIAQPRIFMIMGSDGLLPPVFAKIHPVHKTPHINTIITGVGIALLAAVFPLDVLGDL
                     VSMGTLIAFVAVCAGVLILRYTRPELPRTFRVPWAPVTCTLGVLCCLGLLYWENWYQW
                     LLMGIWTAIGLVIYFGYGYRHSRLRTESRE"
     gene            complement(3257..>3940)
                     /locus_tag="VFM52_06320"
     CDS             complement(3257..>3940)
                     /locus_tag="VFM52_06320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007513030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HET8764816.1"
                     /translation="SYGAVGSVGSQPLVDAHGVAFEPGTPDFAAACATVSAHAAQPLV
                     CSKEALAHVLRLLDHNQLGNLVGLAAGIALPSVILTMTYGQTRIFFTMARDGLLPAGL
                     AKIHPRFHTPHIITLITGTFVALFGALFPVGVLADITNSGTLFAFMMVALGVLILRRT
                     QPDRPRPFRTPIAWLVCPLAVLGCLLLFLNLSEKAIVTFFVWGGIGLVVYFLYGYRKS
                     NLARGGSSN"
BASE COUNT          693 a         1248 c         1351 g          648 t
ORIGIN      
        1 tttgaggctg atcacgtcga cggcttgata gccttcctcg cgcatcaggc ggtcgatgtc
       61 ggcgcgatag gcggcaatca cttcctcctg gctcgcgcca ggagcgatcg gctggttggc
      121 tgcccactgc tcgaagcgca cgccggcctt ggccagttcg cgcttgatgt cggcgtgatc
      181 ggtccagctc gcgatcgggt tggcggggtg gttttcgtcg aagatgcgca ggcggctcac
      241 ggggtcaatc tcctcaggtc cagttcgcaa tcgagcagga attccagcgc ctcgaggtgg
      301 cgctgtgcct cggccatgtc gcggccccag gtgtagaggc cgtgaccgtc gatcaggtag
      361 gctgccagcg gcttgccggc atcgagccag gcatccacct gcgccaccag ctcgggcatg
      421 tgctgggtgt tgggaaacac cgggatggcg agcgtgtcgg catgcgtggt ggtgccggcg
      481 atcgccttct gcagctccca gccttgcagc cgcaccgcgc cggcgcgggc gtacaggcgc
      541 gaagcgacgc tttgcacgtg cgagtgcgtg tgcagcacga cgccggccgt cggcatccgg
      601 cggtagatct gcgtgtgcag cgcggtttcc gcgctcggcc gcgccgtggt gccgaccgga
      661 ttgccggcgg cgtcgaccag catgatgtcg tcggcgcgaa gccgaccctt gtcgcgcccc
      721 gagatcgtga tcgcggcgtg cgcggcatcc acccgcatcg agaagttgct gctggtggcc
      781 ggcgtccagc cgcgtgccgc cacctcgtgt gcggcatggg cgatggcctc ggcacaggcg
      841 cggaacacgg cgcgcggaat cgagtcgggc agttgctggc tcatgcaaat ggacgtccaa
      901 acgagtggcc gactatacac caagggtgcc ggcgatcgtc ggcgttaatg cgatccattc
      961 gcgccttgcg ccgtattcgc ggcgtaggat cgaacctgtt ccgtcatccg tggatggcgg
     1021 cctgcatggc aacgacggag gttttttcat gtcgcacgaa gagaacaacg agtcgcgtcg
     1081 ccgttttctc aaggtggctg ccggtaccac ggcggctgcg gtggtgctgg gtgggctgcc
     1141 acgcatggcc cgtagtgccg acctgccgca cgtgacggcg gccgacccca cggccaaggc
     1201 actcgactat atcgatgatg cgggcaagac caagaatccg aaacacaagg ccggcgacga
     1261 ctgcgccaac tgccagttct actcgggcgg tgccaccggc tacggtccgt gtgcgctgtt
     1321 ccccggcaag tcggtgagcg cgaagggctg gtgcgtgtcg catgcgccca aggcacactg
     1381 acggttcccg ccgtctgccc ggacaaagca aagggccggc gaatgccggc cctttgcttt
     1441 ggttccgccc gcaaaagcgg gtggtggaaa aagtgctgcc cggcacatca ggctgaggag
     1501 ctacgcacct gaggtgccgg gcggcgatcc ggggcccact gccaagtgat caaccctcgg
     1561 gtcgaggatg ataacccgcg ccaccgtgaa tgggctgttt gtatgcggtt ttcttttgga
     1621 aaggtttcgt tatacccttt ccgaacaagt acttggcgtg caaacttgat gttgtaggca
     1681 cattccttgg cacgtctgtc gaactctgcg cgatcactgc aaatccgaca ttatcgcgac
     1741 ggatcatcga cgttcgacgc agcttacgcc attactccct ggactcggta cgcaggcggc
     1801 tgtgccggta tccgtagccg aagtagatca ccaggccgat tgcggtccag atacccatca
     1861 gcagccactg ataccagttt tcccagtaca gcaggccaag gcagcacagc acgcccagcg
     1921 tgcaggtgac cggtgcccac ggcacgcgga aggtgcgcgg cagctcgggg cgggtgtagc
     1981 gcaggatcag cacgccggca cataccgcga cgaaggcgat caaggtgccc atcgatacca
     2041 ggtcgccgag cacgtcgagc gggaacaccg cagccagcag cgcgatgccc acgccggtga
     2101 tgatggtgtt gatgtgcggc gtcttgtgca ccggatggat cttcgcgaac accggcggca
     2161 gcaggccgtc gctgcccatg atcatgaaga tgcgcggctg ggcgatgatc atcaccagca
     2221 ccaccgatga caggccgatc agcgcgccga cctcgacgat ccagcgcagc cagccgagct
     2281 ccgggtgcgc cttcaccgcg gtcaccaccg gttcgctggt gccgagctgg tcgaacggca
     2341 gcaggccggt gatgaccgcc gccatgccga tgtagagcac ggtgcagatc gccagcgaca
     2401 ccagggtgcc gatcggcagg tcgcgctgcg ggttcttggc ttcctgcgcc gccgtcgagg
     2461 tggcctcgaa accgatgtag gcgaagaaca ccagcgtcgc cgcgcgcatg atcccgggcc
     2521 agccgtattt ctccggccct tgctgcgccg ggatgaacgg ctcccagtaa tgcgggttca
     2581 cgtactgcca gccggcgacg atcacgatga tgatcaggcc gaccttgagc gtcaccatcg
     2641 ccaggttcgc gccgctggat tcgcggatgc cgatgtagca cagccaggtc agcgccagca
     2701 cgatcagcac tgccggcagg ttgatcaggg caccggtggc gatcaggtgt ccgcccttgt
     2761 acgccaaggg tgcgttgacg agcacgccgg gcagatgcag ccccatgtgg tcgagcaggc
     2821 tggtgaagta gccggtccag ctcacggcca ccgccgacgc cgatacgccg tattccagca
     2881 ccatgttcca gccgatgaac cacgccgcca gctcgccgag cgttgcatag gcgtaggagt
     2941 acgagctgcc cgacatcggg atccgcgtgg cgaactcggc gtagcacagc gcggtgaagc
     3001 tgcagcagat cgcggcgatg acgaaggcga ggatgatcgc cgggccggcg tgctcggccg
     3061 ctgcctgccc ggtgatgacg aagatgccgc cgccgatcac ggcgccgatg ccaagtgccg
     3121 tcagacccca cggccccagc gtgcgctgca gggcgacacc atgcgtgccg gtgccgttga
     3181 agtcggtctt gcgggtaaac agttgggtga acatcgagct tccgggcaat gggcaggttg
     3241 cggtgccgcg gccgcgtcag ttcgagctgc cgccgcgtgc aaggttgctc ttgcggtagc
     3301 cgtacaggaa atacaccacc agtccgatgc cgccccagac gaagaaggtg acgatcgcct
     3361 tctccgacag gttgaggaac aacaacaggc agccgagcac cgccagcggg cataccagcc
     3421 acgcgatcgg cgtgcggaac gggcgcgggc gatcgggctg cgtgcggcgc aggatcagca
     3481 cgccgagcgc caccatcatg aatgcgaaca gcgtgcccga gttggtgatg tcggcgagca
     3541 cgcccaccgg gaacaacgca ccgaacaagg cgacgaaggt gccggtgatc agggtgatga
     3601 tgtgcggcgt gtggaagcgc gggtggatct tcgccagccc ggccggcagc aggccgtcac
     3661 gcgccatggt gaagaagatg cgcgtctggc cgtaggtcat ggtgaggatc accgacggca
     3721 gcgcgatgcc cgccgccagc ccgacgaggt tgccgagctg gttgtggtcg agcaggcgca
     3781 gcacgtgggc cagcgcctcc ttgctgcaca ccagtggctg tgcagcgtgc gcgctgaccg
     3841 tggcgcacgc cgcggcaaag tccggtgtgc cgggctcgaa cgcgacgccg tgggcgtcca
     3901 cgagaggctg cgagccgacg gaaccgaccg cgccgtagct
//
LOCUS       DASSVL010000361         4207 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_954843, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000361 DASSVL010000000
VERSION     DASSVL010000361.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 4207)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4207)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4207
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_954843"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(66..1268)
                     /locus_tag="VFM52_06325"
     CDS             complement(66..1268)
                     /locus_tag="VFM52_06325"
                     /EC_number="2.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008211487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid aminotransferase"
                     /protein_id="HET8764817.1"
                     /translation="MSIFAALEMAPGDPILGLTETYLADQRPEKVNLGVGIYVNDAGK
                     VPVLAAVRKVEEALVRENAPRSYLPISGLPAYNAETQKLVFGADSAALAAGRVATVQT
                     IGGSGALRVGADLLKQVLGDKAKLAVSSPTWGNHRAVFKAAGFALVDYRYYDDASHGL
                     DFAGMLEDLGKLEPGTVVLLHACCHNPTGVDPSAAQWAQLVALLKERQLLPFVDMAYQ
                     GFDKGADEDATAVRLLADSGIPAFIVANSYSKSFSLYGERVGALSCVGVDREEAARLL
                     SRMKTTIRANYSSPATHGGKLVAGVLGSPELHAQWQAELTEMRERIHTMRAAMVAKLA
                     ALGAPDFGFINAQTGMFSYSGLSKAQVERLRNEYAIYALTSGRICVAALNTGNIDYVT
                     RAVAAVCR"
     gene            1433..1639
                     /locus_tag="VFM52_06330"
     CDS             1433..1639
                     /locus_tag="VFM52_06330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008438444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF465 domain-containing protein"
                     /protein_id="HET8764818.1"
                     /translation="MQIQDQAETVQLLAELRQEHRDLDAAIKQLSGALGRDELQLTRL
                     KKRKLLLKDNIARLESKLIPDLDA"
     gene            1636..2238
                     /locus_tag="VFM52_06335"
     CDS             1636..2238
                     /locus_tag="VFM52_06335"
                     /EC_number="2.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019463670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family protein"
                     /protein_id="HET8764819.1"
                     /translation="MNATAVAPVTLSNEYVTLEPLAAGHAAELEAAAVDGELWNFPYT
                     RIPGQGEGAAYVDAALKGQAEGRMLPFAVREASTGKVVGSTRYYDIDLGLPRLYIGYT
                     WYAKAWQQKHLNTACKQLLLEHAFDTLHCVAVAFNVDEMNGRSMHAVEHIGAQREGVL
                     RAHKRRRDGSLRNTVAFSILAEDWPNVENWLAMRLNKLAP"
     gene            complement(2254..3279)
                     /gene="tsaD"
                     /locus_tag="VFM52_06340"
     CDS             complement(2254..3279)
                     /gene="tsaD"
                     /locus_tag="VFM52_06340"
                     /EC_number="2.3.1.234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019464948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     transferase subunit TsaD"
                     /protein_id="HET8764820.1"
                     /translation="MLGIESSCDETGVAILRWVPDAPGTGLLAHVLYSQIKLHANYGG
                     VVPELASRDHVRKLLPLVREVLAQAGLKPSDLGGVAYTAGPGLVGALLVGAAAGRALA
                     WGLGVPALAVHHMEGHLLAPLLEEDPPKPPFVALLVSGGHSLLVEVKAIGQYRILGDT
                     LDDAAGEAFDKTAKLMGLPYPGGPALAKIATQGTHGTFRFSRPMTDRPGLDFSFSGLK
                     TQVLLAWQHSDQREQTRADIALGFEEAIVDTLLIKCRRALAATGTDKLVIAGGVGANR
                     RLRAELAAAGEKDGFRTYFPRLAFCTDNGAMIALAGAIRLAHGQWQNESVQVRPRWNL
                     EELPPAA"
     gene            3416..3631
                     /gene="rpsU"
                     /locus_tag="VFM52_06345"
     CDS             3416..3631
                     /gene="rpsU"
                     /locus_tag="VFM52_06345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011235429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S21"
                     /protein_id="HET8764821.1"
                     /translation="MPNVKVRENEPFEVALRRFKRTCEKAGILAETRKREFYEKPTQE
                     RKRKRAAAVKRHLRRLSRDVTRKTRLY"
     gene            3795..>4207
                     /locus_tag="VFM52_06350"
     CDS             3795..>4207
                     /locus_tag="VFM52_06350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013533885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GatB/YqeY domain-containing protein"
                     /protein_id="HET8764822.1"
                     /translation="MTLKQQLTEDMKTALRGGDKQRLGVIRLVLAALKQREVDERIVL
                     DDAQVIAVLEKMLKQRRDSISQYDAAHRSDLADAERAEMTVIEAYLPKPLDAAEVDAI
                     IAAAVQSTGATSMRDMGKVMAVVKEQAAGRADMAKV"
BASE COUNT          745 a         1458 c         1377 g          627 t
ORIGIN      
        1 gatatccatg cagagaagcg aaggccgcct tgcggcggcc acgcatatag gacaagccgg
       61 aggagtcagc gacaaacggc cgcgacggcc ctggtcacgt agtcgatatt gccggtgttg
      121 agcgcggcga cgcaaatgcg cccgctggtg agcgcgtaga tcgcgtactc gttgcgcagg
      181 cgctcgacct gggccttgga cagcccggaa tacgagaaca tgccggtctg cgcgttgatg
      241 aagccgaagt ccggcgcgcc gagcgcggcg agcttggcga ccatcgccgc gcgcatggtg
      301 tggatgcgct cgcgcatctc ggtgagctcg gcctgccact gcgcgtgcag ctcggggctg
      361 ccgagcactc cggccaccag cttgccgccg tgcgtggccg ggctggagta gttggcgcgg
      421 atcgtggtct tcatgcgcga cagcaggcgc gcggcctcct cgcgatccac gccgacgcag
      481 ctcagcgcac ccacacgttc gccgtacagc gagaacgatt tcgagtacga gttggcgacg
      541 atgaacgccg ggatgccgga atcggcgagc aggcgcaccg ccgtcgcatc ctcgtcggcc
      601 cccttgtcga aaccctggta ggccatgtcg acgaacggca gcagctggcg ttccttgagc
      661 agtgcgacca gctgcgccca ctgcgcagcg ctcgggtcga cgccggtcgg attgtggcaa
      721 caggcatgca gcagcacgac ggtgccgggt tcgagcttgc cgaggtcttc gagcatgccg
      781 gcgaaatcca gcccgtggct ggcatcgtcg tagtagcggt agtccaccag cgcaaacccg
      841 gcggccttga acaccgcgcg gtggttgccc caggtggggc tgctcaccgc gagcttcgcc
      901 ttgtcgccga gcacctgctt caggagatcg gcgccgacgc gcagcgcgcc gctgccgccg
      961 atggtctgca cggtggcgac gcgcccggcc gcgagcgcgg cggaatcggc accgaacacc
     1021 agcttctgcg tctcggcgtt gtacgccggc aagccgctga tcggcaggta gctgcgcggc
     1081 gcgttctcgc gcaccagcgc ctcctcgacc ttgcgcacgg ccgccagcac cggcaccttg
     1141 ccggcgtcgt tcacgtagat gccaacgccg aggttcactt tctccgggcg ctggtccgcg
     1201 aggtaggttt cggtaaggcc gagaatcgga tcgcccggcg ccatttcgag agcagcaaag
     1261 atggacacga tttccctcgc tcgggatgcg tttggaagga tggacatccg cgcatgcgga
     1321 cgcatcatga tcgcagattc cgcaccgcaa caaaacagcg attgcagtgc acgcgtggcc
     1381 ccattgtaac ggtgcgcact acactgtcgg cttcatcgag cgaaccgctt tcatgcagat
     1441 ccaggaccaa gccgaaaccg tccagctgct cgccgaactg cggcaggagc accgcgacct
     1501 cgacgccgcc atcaagcaac tgtccggcgc gctcggccgc gacgagctgc agttgacccg
     1561 cctcaagaag cgcaaattgc tgttgaaaga caatatcgcg cgccttgaaa gcaagctcat
     1621 cccggatctc gatgcatgaa tgccaccgct gtcgcccccg tcacgctcag caacgaatac
     1681 gtcacgctgg aaccgctcgc cgccggccac gcggctgagc tcgaagccgc agcagtcgat
     1741 ggcgaactgt ggaactttcc gtacacccgc atccccggcc agggcgaagg cgccgcctac
     1801 gtcgacgccg cgctgaaggg gcaggccgag ggccgcatgc tgccgttcgc ggtgcgcgag
     1861 gccagcaccg gcaaggtcgt cggcagcacg cgctactacg acatcgacct gggcctgccg
     1921 cggctctaca tcggctacac gtggtatgcg aaggcgtggc agcagaagca cctcaacacc
     1981 gcctgcaagc agctcctgct cgagcacgcg ttcgacacgc tgcactgcgt ggccgtggcg
     2041 ttcaacgtcg acgagatgaa tgggcgctcg atgcacgcgg tcgagcacat cggcgcccag
     2101 cgcgaaggcg tgttgcgggc gcacaagcgc cggcgcgacg gcagcctgcg caacacggtg
     2161 gctttcagca tcctcgccga ggactggccg aacgtcgaga actggctcgc catgcgcctc
     2221 aacaagctcg cgccctgagg cgcgggcaag gcttcacgcg gctggcggca gctcctcaag
     2281 attccagcgc gggcgcacct gcaccgactc gttttgccac tggccgtggg ccagccggat
     2341 cgcgccggcc agcgcgatca tcgcgccgtt gtcggtgcag aacgccaggc gcgggaaata
     2401 ggtgcggaac ccgtccttct cgccggctgc ggccagctcg gcacgcaggc ggcggttggc
     2461 gccgacgccg ccggcaatca ccagcttgtc ggtaccggtc gcagccagcg cacgacggca
     2521 cttgatgagc agggtgtcga cgatggcctc ctcgaacccg agggcaatgt cggcgcgtgt
     2581 ctgttcgcgc tggtccgagt gctgccaagc cagcagtacc tgggtcttga gcccggaaaa
     2641 gctgaagtcc agccccggtc ggtcggtcat cggccgcgaa aagcggaacg tgccatgggt
     2701 gccctgggtg gcgatcttcg ccagcgccgg gccaccggga tatggcaagc ccattagctt
     2761 cgcggtcttg tcgaacgcct cgccggcggc gtcgtccagg gtgtcgccga ggatgcggta
     2821 ctggccgatc gccttcacct cgaccagcag cgagtgcccg cccgacacca gcaatgcgac
     2881 gaacggtggc ttcggcgggt cttcctccaa tagcggcgcc aagaggtgcc cttccatgtg
     2941 gtgcacggcc agcgccggca cgcccagccc ccacgccagc gcacgtccgg ccgcggcgcc
     3001 gaccagcagc gcgccgacca ggcccgggcc cgcggtgtag gccacgccac cgagatcgga
     3061 cggcttgagc ccggcctgcg ccagcacctc gcgcaccagc ggcaacagct tgcgcacgtg
     3121 gtcgcgactg gccagctcgg gcaccacgcc gccgtagttc gcgtgcagct tgatctggct
     3181 gtacaacacg tgggccagga ggcccgtgcc cggcgcgtcc ggcacccagc gcaggatcgc
     3241 cacgccggtc tcgtcgcacg aggattcgat acccagcacc ggcttgccga ccaccggccc
     3301 cgcggccgtc ttcacgcctt gctgctttga aagttcgctg tcaggcacgg tatacttcgc
     3361 ggctcgccgc attcaacgac cctgaaagcg gcacagctta ccactcggag tattcatgcc
     3421 caacgtcaaa gtccgcgaga acgaaccgtt cgaggttgcc ctgcgccgct tcaagcgcac
     3481 ctgcgaaaag gccggcatcc tggccgaaac ccgcaagcgc gagttctacg aaaagccgac
     3541 ccaggaacgc aagcgcaagc gcgcagcggc ggtcaagcgt cacctgcgcc gcctgtcgcg
     3601 cgacgtgacg cgcaagaccc ggctgtactg agtcatcccg catcgttgct ggcgcttgcg
     3661 ccaccgatgc ggacgcggct ggtgcgggtt ccgcagccac cgcaaacact ccgagtcgac
     3721 gaaccggtgt tgccgcaagg caccaccggt tttgtcgttt gcgtaaaatc acccgattcc
     3781 cgcgaggaca caccatgaca ctcaagcagc agcttaccga ggacatgaaa accgcgctgc
     3841 gcggtggcga caagcagcgg ctcggcgtga tccgcctggt gctggccgcg ctcaagcagc
     3901 gcgaggtgga cgagcgcatc gtgctcgacg acgcgcaggt catcgccgtg ctggaaaaga
     3961 tgctgaagca gcgccgcgac tcgatcagcc agtacgatgc cgcccaccgc agcgacctcg
     4021 ccgacgccga gcgcgccgag atgacggtga tcgaggccta cctgcccaag ccgctcgatg
     4081 ccgccgaggt cgacgcgatc atcgccgccg ccgtccagtc caccggcgcc acttcgatgc
     4141 gcgacatggg caaggtgatg gccgtggtca aggagcaggc cgccggccgc gccgacatgg
     4201 ccaaggt
//
LOCUS       DASSVL010000362         2672 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1322401,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000362 DASSVL010000000
VERSION     DASSVL010000362.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2672)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2672)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2672
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1322401"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..547)
                     /locus_tag="VFM52_06355"
     CDS             complement(<1..547)
                     /locus_tag="VFM52_06355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007513096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016881 - acid-amino acid ligase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Mur ligase family protein"
                     /protein_id="HET8764823.1"
                     /translation="MSRTLAEWLEYQQHVNPHTIELGLDRVRSVWQRMGAAAPARRVI
                     TVAGTNGKGSTVALVEAMARGAGLRVGAYTSPHLLAYNERIRIDGADVDDAALLASFA
                     RIEAARGDTLLTFFEYATLAALDLFARAKLDIAVLEVGLGGRLDAVNIVDADVAVITT
                     IDLDHMEWLGPDRDSIGREKAG"
     gene            complement(616..>2672)
                     /locus_tag="VFM52_06360"
     CDS             complement(616..>2672)
                     /locus_tag="VFM52_06360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016451564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="copper-translocating P-type ATPase"
                     /protein_id="HET8764824.1"
                     /translation="KCGMALEPMLPTAEADDGGEVHAMARRLAALVALTLPVFVIAMG
                     PHLFGWHWPAPWAGTAGWIETVLATVVVLWGGAPFFARGWRSLKPWSPNMYTLIALGT
                     GVAWVYSAVAFLFPAVFPVGFRDAHGQVDVYFESAAVIVTLVTLGDFLELRARRRTGA
                     ALQALLGLAPKTARRIAADGSEADVPLDAVVVGDTLRVRPGEKVPVDGVVVQGASHVD
                     ESMLTGESMPVDKQAGDKLAGGTVNHDGSLVMRAQKVGGETLLAQIVSLVAQAQRSRA
                     PLQRVADRVAAWFVPAVVAVALTAFVVWVLVGPPPAWAHALIAGVSVLIIACPCALGL
                     ATPISIMVASGRGAQHGVLFKDAGAIEALRSIDTLVVDKTGTLTVGKPALVDVVLTGT
                     LPRERVLALAAAIERPSEHPLAHAIVAAAVAEGAATLEADDFRAWTGRGVTAQVDGAA
                     VALGNAPLLAARGIAMAATVGVQADRLRGQGATVMHLAVGGELVALLAVADQVKPEAA
                     RTVAALKRAGLRLVMLTGDNAVTARAVATRLGIDDVRAEVSPADKAAAVATLKADGAR
                     VAMAGDGVNDAPALAAADVGIAMGSGSDVALESAQVTLVKGDLSAILRARTLSRATVR
                     NIHQNLFFAFIYNGIGVPLAAGVLYPAFGILLSPMIAALAMSLSSVSVVSNALRLRKL
                     AL"
BASE COUNT          431 a         1017 c          871 g          353 t
ORIGIN      
        1 tgccggcctt ctcgcggccg atgctgtcgc ggtccggacc cagccattcc atatggtcga
       61 ggtcgatggt ggtgatcacc gccacgtcgg cgtcgacgat gttgaccgca tcgagccgcc
      121 cgccgaggcc gacttccagc acggcgatgt cgagcttggc gcgcgcgaac agatccagcg
      181 cggcgagcgt cgcgtattcg aagaacgtca gcagcgtgtc gccacgcgcg gcctcgatgc
      241 gcgcgaaact cgccagcagc gcggcgtcat cgacatccgc gccgtcgatg cggatgcgct
      301 cgttgtaggc cagcaaatgc ggcgaggtat acgcccccac gcgcaggccg gcgccgcgcg
      361 ccatcgcctc gaccagcgcc accgtcgaac ccttgccatt ggtgccggcc acggtgatga
      421 cgcgccgcgc tggcgcggcg gcacccatgc gttgccacac gctgcgcacg cgatccaggc
      481 ccagctcgat ggtgtgcgga ttgacgtgct gctggtattc aagccattcg gcaagcgtgc
      541 gggacatgga aacgggcggc ctcgcgtggt gaaaaccgga agcttacgcg atcgccgcga
      601 tcgtgccgat gaatctcaca gcgcgagctt gcgcaagcgc aacgcgttcg acaccaccga
      661 caccgagctc aggctcatcg ccagcgccgc gatcatcggc gacagcagga tgccgaacgc
      721 gggatacagc accccggccg caagcggcac gccgatgccg ttgtagatga aggcgaaaaa
      781 caggttctga tggatattgc gcacggtcgc ccgcgacagc gtgcgcgcac gcaggatcgc
      841 ggaaaggtcg cccttcacca gcgtgacttg tgcgctttcc aacgccacgt cgctgccgct
      901 gcccatcgcg atgccgacgt cggcggcggc cagcgccggc gcatcgttga cgccgtcgcc
      961 ggccatcgcc acccgcgcgc catccgcctt gagcgtcgcg accgcagccg ccttgtccgc
     1021 tggcgacacc tcggcgcgca cgtcgtcgat gccgagccgg gtcgccaccg cacgcgcggt
     1081 gacggcgttg tccccggtca acatcaccag gcgcaggccg gcgcgcttga gcgcggcgac
     1141 ggtgcgtgcc gcctcgggct tgacctggtc ggcaaccgcc agcagggcga ccagttcgcc
     1201 acccacggca agatgcatca ccgtcgcgcc ctgtccgcgc agtcgatcgg cttgcacacc
     1261 gacggtggcg gccatggcga ttccccgcgc ggccagcaac ggcgcgttgc cgagtgccac
     1321 cgccgccccg tcgacctgcg ccgtcacgcc gcgcccggtc caggcgcgga agtcatcggc
     1381 ttccagcgtc gccgcgcctt cagccactgc cgcggccacg atcgcatgcg ccagcgggtg
     1441 ctcgctcggc cgttcgatcg cggccgccaa cgccagcacg cgctcgcgcg gcagcgtgcc
     1501 ggtgagcacg acatcgacca gcgccggctt gccaaccgtc agcgtgccgg tcttgtccac
     1561 caccagggtg tcgatgctgc gcagcgcctc gatcgcgccg gcgtccttga acagcacgcc
     1621 gtgctgcgcg ccgcggccgc tggcaaccat gatcgaaatc ggggtcgcca gcccgagcgc
     1681 acacgggcag gcgatgatca gcaccgacac gccggcgatc agcgcatgcg cccatgccgg
     1741 cggcggcccg accagcaccc acacgacgaa cgcggtgagc gcaaccgcga ccaccgccgg
     1801 cacgaaccac gcggcaacgc ggtcggccac gcgctgcagg ggcgcgcggc tgcgctgggc
     1861 ctgggcgacg aggctcacga tctgcgccag caacgtctcg ccgccgactt tctgcgcacg
     1921 catcaccagg ctgccgtcgt ggttcaccgt gccgccggcg agcttgtcgc ccgcctgctt
     1981 gtccaccggc atcgactcac cggtgagcat cgactcgtcg acgtggctgg cgccctgcac
     2041 caccacgcca tccaccggca ccttctcgcc ggggcgcacg cgcagggtat cgccgaccac
     2101 gacggcgtcc agcggcacgt cggcctcgct gccgtcggcg gcgatccggc gtgcggtttt
     2161 cggtgcaagg ccaagcagtg cctgcagcgc cgcaccggtg cgccggcgtg cgcgcagctc
     2221 gaggaagtcg cccagcgtca ccagggtgac gatgactgcc gccgattcga aatagacgtc
     2281 cacctgaccg tgcgcgtcgc ggaacccgac cgggaaaacg gcagggaaca ggaacgccac
     2341 cgcgctgtac acccacgcca caccggtgcc caacgcaatc agcgtgtaca tgttcggcga
     2401 ccacggcttg agcgagcgcc agccgcgcgc aaagaacggc gcgccgcccc acagcaccac
     2461 cacggtcgcc agcaccgttt cgatccagcc ggcggtgcct gcccacggcg ccggccagtg
     2521 ccagccgaac aggtgcgggc ccatcgcaat cacgaacacc ggcagcgtca gcgcgaccag
     2581 cgccgccagc cgccgtgcca tggcatggac ttcaccgcca tcgtccgcct ccgccgtcgg
     2641 cagcatcggc tccagcgcca tgccgcactt cg
//
LOCUS       DASSVL010000363         5733 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_587545, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000363 DASSVL010000000
VERSION     DASSVL010000363.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 5733)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5733)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5733
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_587545"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1546)
                     /locus_tag="VFM52_06365"
     CDS             complement(<1..1546)
                     /locus_tag="VFM52_06365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007809937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SLC13 family permease"
                     /protein_id="HET8764825.1"
                     /translation="MTWQAWAVTGIVAVAMVLFASEKVRIDLVALLVLAALVVLGIVS
                     PVEALSGFSNEATVTVAAMFALSIGIEHSGALEPLSRLLMRIRRPWLLTLTLMLAIAP
                     LGAFIKNIALVAMFLPLALRVCQRTGTSPARVLMPMAYAAQMGGVCTLIGTSSNLLAD
                     SLAQQHGLASFGVFEFTGMGALLAVAGITYLMVVGRWLLPRHIAADDLEEEEIGKFVT
                     ELALAPSSPLVGKSIADVHLGERFGVYPLELLRGERRMWTPRSQQLRAGDVLLVRGDW
                     EKIEEFQRRAHLRNVPESRYAPDTGHPRVLAEMMVAPASLAEGRRLAETDLGRRPDAV
                     ALAIHRRGQVLRDKLADVSLAVGDVLLVLVEAESMPSLRADDAFIVLSERTDTRRLSR
                     KALYAVAIMAGVVLVSGLRWLPIPVAAICGAAAMALTGCFGRKDVYEGMDWKIIVLLG
                     AILPLGTAIESTGLSHAVVAAGLGLIGNHGPLAALLMVYLLTALLTELMGHNPSVVLM
                     VGIAVTV"
     gene            1705..2628
                     /locus_tag="VFM52_06370"
     CDS             1705..2628
                     /locus_tag="VFM52_06370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007512229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HET8764826.1"
                     /translation="MTSSEPRPAGGPSVALALGAGGAKGLAHIGVIEELTARGFRITA
                     IAGSSMGALIGGIHAMGKLDVYRDWVVSLAKLDVLRLVDWTLSGGLIKGDRIIDTLRE
                     LIGDTLIETLPIAFTAVATDIDRGREMWLTRGPLFDAIRASIAIPTIFRPHPIDGRRC
                     VDGALLNPVPVTPLIREPADYVIAVSIDGAATKPVVPAVSETPEPSAATGYRQRIGAF
                     VSRLVAHHGDAVNREPGALELLAQSIELMQANLARLRLSAYEPDLLIQMPRNIASAYE
                     FYRARELIELGRAAARDALANWPPAANVEHP"
     gene            complement(2689..3057)
                     /locus_tag="VFM52_06375"
     CDS             complement(2689..3057)
                     /locus_tag="VFM52_06375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007809934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF488 domain-containing protein"
                     /protein_id="HET8764827.1"
                     /translation="MSIAIKRVYEPAAKSDGYRVLIDRLWPRGLKKEAVPLDVWAKEL
                     APSTELRKWFGHDPALWSGFQERYVAELDQLKEHWQPIAERATTRPVTILFGAHDTEH
                     NNAVVMKAYLEKWLHAHGGK"
     gene            complement(3201..3917)
                     /locus_tag="VFM52_06380"
     CDS             complement(3201..3917)
                     /locus_tag="VFM52_06380"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015449182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HET8764828.1"
                     /translation="MPQLSVVVPVFNERDNIPPLLAEIAAALRGKVDYEVIYIDDDSS
                     DDSRAVLAAQKAQHPELRVLHHVTRSGQSTAVWNGVHAARGVWIATLDGDGQNDPADI
                     PKLLAARDAATGEVKLLAGWRTTRRDSFNKRISSKIANAVRSRMLKDATPDTGCGLKL
                     FEREVFLRLPYFDHMHRYLPALVKRAGFESRSVPVGHRPRTAGVSKYGMLDRLWVGLA
                     DLRGVAWLMRRAKVTRVEEL"
     gene            4052..5143
                     /locus_tag="VFM52_06385"
     CDS             4052..5143
                     /locus_tag="VFM52_06385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019464190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PA0069 family radical SAM protein"
                     /protein_id="HET8764829.1"
                     /translation="MADAVDKPQAIKGRGAASNPEGRFETIRHHAEDDGWQSALLDET
                     APRPRTEVTAETAKSVITRNDSPDIGFDQALNPYRGCEHGCIYCFARPSHSYLNLSPG
                     LDFETRLRAKTNLAEVLRAELGKPGYVVKPINIGSNTDPYQPVEKRLRLTRAALEVLA
                     ACHHPCTIVTKNAMVERDIDLLAPMAREHLVQVFVSVNSVDNHLAAKLEPRATAPHRR
                     IAAIRTLSAAGIPVGVLVAPIIPAVNDKDLETVLERAAQAGAVSAGYTTLRLPWELKT
                     LFREWLALHLPERAEHVMSLIRQMNGGRDYDADFRTRMHGQGVFAELLRKRFDVACRK
                     HDLARSRDLRLDCSRFVPPREPSPQGELF"
     gene            complement(5231..5551)
                     /locus_tag="VFM52_06390"
     CDS             complement(5231..5551)
                     /locus_tag="VFM52_06390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017462223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HigA family addiction module antitoxin"
                     /protein_id="HET8764830.1"
                     /translation="MKEARHVQERHAPVHPGEILREDYLVPLAMSANALAEALNVPAP
                     RINDIVRERRGVSADTALRLARYFGGDPQSWLNLQAAFDLRTAEIAAGKRIEREVAVM
                     ERAA"
     gene            complement(5548..>5733)
                     /locus_tag="VFM52_06395"
     CDS             complement(5548..>5733)
                     /locus_tag="VFM52_06395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008214582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HET8764831.1"
                     /translation="LLAGLDATQELRDLRSPPGNRLEAPRGDRAGQHSIRINGQFRIC
                     FIWNGSDAEQVEIVGYH"
BASE COUNT          915 a         2117 c         1899 g          802 t
ORIGIN      
        1 ccacggtcac cgcgatgccc accatcagta ccactgatgg gttgtggccc atcagttcgg
       61 tgagcagcgc ggtgagcagg tacaccatca gcagcgctgc cagcgggcca tggttgccga
      121 tcagcccgag cccggccgcg accaccgcgt gcgacaggcc ggtgctctcg atcgcggtgc
      181 cgagcggcag gatcgcgccg agcagcacga tgatcttcca gtccatgccc tcgtagacgt
      241 ccttgcggcc gaagcagccg gtgagtgcca ttgccgccgc gccgcagatc gcggcaaccg
      301 ggatcggcag ccagcgcagg ccggacacca gcaccacgcc agccatgatc gcgacggcgt
      361 acagcgcctt gcgcgacagc cgccgggtgt cggtgcgctc gctgagcacg atgaacgcat
      421 cgtcggcgcg cagcgacggc atgctctccg cctcgaccag caccagcagc acgtcgccca
      481 ccgcgaggct cacgtcggcc agcttgtcgc gcagcacctg gccgcggcga tggatcgcca
      541 gcgccaccgc atccgggcgc cggccgaggt cggtttccgc cagccgccgg ccttcggcaa
      601 ggctcgccgg cgcgaccatc atttccgcca gcacgcgcgg gtggccggtg tccggcgcgt
      661 agcggctctc cggcacattg cgcaggtgcg cgcggcgctg gaactcctcg atcttctccc
      721 agtcgccgcg caccagcagc acgtcaccgg cgcgcaactg ctgcgagcgc ggcgtccaca
      781 tgcgccgctc gccgcgcaag agttcgagcg gatacacgcc gaagcgctcg cccagatgca
      841 cgtcggcgat gctcttgccg accagcggcg agctcggcgc cagcgccagc tcggtgacga
      901 acttgccgat ctcctcttcc tcgaggtcgt cggcggcgat gtggcgcggc agcagccagc
      961 gcccgaccac catcaggtag gtgatgccgg ccaccgccag caatgcgccc atgccggtga
     1021 actcgaacac gccgaaactg gccagcccgt gctgctgcgc cagcgagtcg gccagcaggt
     1081 tcgacgaggt gccgatcaag gtgcacacgc cgcccatctg cgccgcgtac gccatcggca
     1141 tcagcacccg cgccggcgag gtgccggtgc gctggcacac gcgcagcgcc agcggcagga
     1201 acatcgccac cagcgcgatg ttcttgatga acgcgccgag cggcgcgatc gccagcatca
     1261 gcgtgagcgt caagagccac ggccggcgga tgcgcatcag caggcggctc agcggctcca
     1321 acgcgccgga gtgctcgatg ccgatcgaca gcgcgaacat cgcggccacc gtcaccgtgg
     1381 cctcgttgct gaacccggac agcgcctcga ccgggctgac gatgccgagc accaccagcg
     1441 ccgccagcac cagcagcgcc accaggtcga tgcgcacctt ctcgctggcg aacagcacca
     1501 tcgcgaccgc gacgatgccg gtcaccgccc aggcttgcca ggtcatgcgg cggttccaca
     1561 cggagcgggc gcccaccgcg cccgggcgat cttggtcatc ggcttccttc ccggcgcccg
     1621 ggacggcgcc ctgccctgca tgctacgcga ccaggccgca cgccggaacc ggcaggcccg
     1681 cgcgttccgc ggcagaatgc cggcatgacg agcagcgaac cacggccagc aggcggcccg
     1741 agcgtggcgc tggcccttgg cgccggcggc gccaagggcc tggcccacat cggcgtgatc
     1801 gaggagctca ccgcgcgcgg cttccgcatc accgccatcg ccggcagctc gatgggcgcg
     1861 ctgatcggcg gcatccacgc gatgggcaag ctcgacgtgt accgcgactg ggtggtgtcg
     1921 ctggccaagc tcgacgtgct gcggctggtc gactggacgc tctccggcgg gctgatcaag
     1981 ggcgaccgca tcatcgacac gctgcgcgag ctgatcggcg acaccttgat cgagaccttg
     2041 ccgatcgcgt tcaccgcggt cgccaccgac atcgaccgcg ggcgcgagat gtggctgacg
     2101 cgcggcccgc tgttcgacgc catccgcgcc tcgatcgcga tccccacgat ctttcgcccg
     2161 cacccgatcg acggccgccg ctgcgtcgac ggcgcgctgc tgaacccggt gccggtgacg
     2221 ccgctgatcc gcgaaccggc cgactacgtg atcgcggtga gcatcgacgg cgccgcgacg
     2281 aaaccggtgg tgccggccgt gtccgagacg ccggaaccca gcgcggccac cggttaccgg
     2341 cagcgtatcg gcgcgttcgt cagccggctg gtcgcccacc acggcgacgc ggtgaaccgc
     2401 gaaccgggcg cgctggaact cctggcgcaa tccatcgagc tgatgcaggc caacctcgcg
     2461 cgcctgcgtc tctccgccta cgagccggat ctgctgatcc agatgccgcg caacatcgcc
     2521 agcgcctacg agttctaccg cgcgcgcgag ctgatcgaac tcggccgggc cgcggcccgc
     2581 gacgcactgg cgaactggcc gccggcggcg aacgtggagc acccctgaga cggagcgcgc
     2641 ggcgcgcggg ccgtcatcac cagggcgcac gccgcgtgcc gcggcgcgct acttgccgcc
     2701 gtgcgcgtgc agccactttt cgagataggc cttcatcacc accgcgttgt tgtgctcggt
     2761 gtcgtgcgcg ccgaacagga tggtgaccgg gcgggtggtg gcgcgttcgg cgatcggctg
     2821 ccaatgttcc ttgagctggt cgagctcggc cacgtagcgc tcctggaaac cgctccacag
     2881 ggcgggatca tggccaaacc acttgcgcaa ctcggtggac ggcgccagct ccttcgccca
     2941 cacgtcgagc ggcaccgctt ccttcttcag cccgcgcggc cacaaccggt cgatcagcac
     3001 gcggtagccg tcactcttcg cggccggctc gtacacgcgc ttgatggcaa tgctcatggc
     3061 aagactcctg cagcaaccac caatcagcat acgcgcgcgc agtcacgcag gcgtgacgcg
     3121 gctcagcgcc tgcaaagccc ggacatcatc gcaagggcgt cgccggcggc cgcagcagag
     3181 gccggctttt tcacgggccc tcaaagctcc tcgacgcgcg tgaccttggc ccgacgcatc
     3241 agccaggcca cgccgcgcag gtcggccagg cccacccaca ggcggtcgag catgccgtac
     3301 ttggataccc cggcggtgcg cgggcgatgg cccaccggca cgctgcggct ctcgaacccg
     3361 gcgcgcttca ccagcgccgg caggtagcgg tgcatgtggt cgaaatacgg caggcgcagg
     3421 aacacctcgc gctcgaacaa cttcagcccg cagccggtgt ccggcgtggc gtccttgagc
     3481 atgcgcgagc gcaccgcgtt ggcgatcttg gacgagatgc gcttgttgaa gctgtcgcgc
     3541 cgcgtggtgc gccagccggc gagcagcttc acctctcccg tggcggcgtc gcgcgccgcg
     3601 agcagcttcg ggatgtccgc cggatcgttc tggccgtcgc cgtcgagcgt ggcgatccac
     3661 acgccgcgcg ccgcgtgcac gccgttccac accgccgtgc tctgcccgct gcgcgtcacg
     3721 tggtgcagca cgcgcagctc ggggtgctgc gccttctgcg cggccagcac cgcgcggctg
     3781 tcgtcgctcg aatcgtcgtc gatgtagatc acctcatagt cgaccttgcc gcgcagcgcg
     3841 gccgcgatct cggcgagcag gggcgggatg ttgtcgcgtt cgttgaacac cgggacgacg
     3901 acggaaagct gcggcatggc agggccttga tggaaacggg cgccgcgatg cgcgcggcgt
     3961 gcgcgcattt tacgtggcag cggcgcgggc cgcacagcgg cgggcccggc gtgtcgcacc
     4021 ggttgagatg ccggcgcgac acactgcacg catggccgac gccgtcgaca aaccgcaggc
     4081 gatcaagggt cggggcgccg cctcgaaccc cgaaggccgg ttcgagacca tccgccacca
     4141 cgccgaggac gacggctggc aaagcgcact gctggacgaa accgcaccgc gcccgcgcac
     4201 cgaagtcacc gcggaaaccg cgaaaagcgt catcacccgc aacgactcgc cggacatcgg
     4261 gttcgaccag gcgctgaacc cgtaccgcgg ctgcgagcac ggctgcatct actgcttcgc
     4321 gcggcccagc cacagttacc tgaacctctc gcccggcctc gatttcgaga ccaggctgcg
     4381 cgccaagacc aacctcgccg aggtgctgcg cgcggagctg ggcaagcccg gctacgtggt
     4441 gaaaccgatc aacatcggct ccaacaccga cccgtaccag ccggtggaaa agcgcctgcg
     4501 cctgacccgc gccgcgctcg aagtgctggc cgcgtgccat cacccgtgca ccatcgtcac
     4561 caagaacgcg atggtcgagc gcgacatcga cctgctggcg ccgatggcac gcgagcacct
     4621 ggtgcaggtg ttcgtctcgg tcaactcggt agacaaccac ctggccgcaa aactcgaacc
     4681 acgcgcgacc gcgccgcacc ggcgcatcgc ggccatccgc accttgagcg cagccggcat
     4741 cccggtcggc gtgctggtcg cgccgatcat tcccgcggtg aacgacaagg acctggaaac
     4801 cgtgctcgaa cgcgcggcgc aagccggcgc cgtcagcgcg ggctacacca cgctgcgcct
     4861 gccgtgggag ctgaagaccc tgttccgcga atggctcgcc ctgcacctgc ccgaacgcgc
     4921 cgagcacgtc atgagcctga tccgccagat gaacggcggc cgcgactacg acgcggactt
     4981 tcgcacccgc atgcacggcc agggcgtatt cgccgaactc ctgcgcaagc gcttcgacgt
     5041 cgcctgccgc aagcacgacc tcgcccgctc gcgcgacctt cggctcgact gctcgcgctt
     5101 cgtgccgccg cgtgaaccct cgccgcaggg ggagctgttc tagccacccg agggacagac
     5161 ctgcacctgg catgtaggtc gggctgaagc ccgacccaca gtcgtggagc tgcagggttc
     5221 cgcgtcccag tcaggcagcg cgctccatga cggccacctc gcgctcgatg cgtttgccgg
     5281 cggcaatctc ggcggtgcgc aggtcgaagg cggcctgcag gttcagccag ctctgcggat
     5341 cgccgccgaa atagcgggcg agccgcagcg cggtatccgc gctcacgccg cgccgctcgc
     5401 gcacgatgtc gttgatgcgc ggcgccggca cgttcagcgc ctcggccagc gcattggcgc
     5461 tcatggccag cggcactagg taatcctcgc gcaggatttc gcccggatgg acgggcgcat
     5521 gccgttcttg aacatggcgg gcctccttca gtgatagccg acgatctcca cctgctcggc
     5581 gtcgctgccg ttccagatga agcagatgcg gaactgaccg ttgatccgga tgctgtgctg
     5641 cccggcgcgg tcgcccctgg gtgcttccag ccgattgccc ggcggcgaac gcaggtcacg
     5701 cagctcttgc gtggcatcca gcccagcaag cag
//
LOCUS       DASSVL010000364         4012 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_587550, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000364 DASSVL010000000
VERSION     DASSVL010000364.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 4012)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4012)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4012
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_587550"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..564)
                     /locus_tag="VFM52_06400"
     CDS             complement(<1..564)
                     /locus_tag="VFM52_06400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013536145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Wadjet anti-phage system protein JetA family
                     protein"
                     /protein_id="HET8764832.1"
                     /translation="MSIDAAPPLFAVVPGGLFGPLASANRERYWALLYRLFAELFGPD
                     APLPPSIGFPRREITAAIERYLLTDDPWESEEGDVPGASLLERANAIYERFRSSGWLR
                     QERVGAREMVAMLPAVAQFLSALVEFAEHGPTFVSAKVRSIELQLRQVVEGKAAGDAL
                     DEAADQARRLLVSLSSMSLKVRDLMPEL"
     gene            complement(651..3758)
                     /locus_tag="VFM52_06405"
     CDS             complement(651..3758)
                     /locus_tag="VFM52_06405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015448746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HET8764833.1"
                     /translation="MNVPALCIRRPVMTTLLMIALVVFGIVAYPNLAVNELPNVDFPT
                     ISVSASLPGAAPETMATAVATPLENQFATIAGISQMTSTSALGATQITLTFDLSRNID
                     AAAQDVQAAISAAQRQLPTNMPTPPTFRKVNPADKAILYLAISSDTLPLSTVDDYGET
                     RLAQELSMVPGVAQVNVFGSQKYAVRIGVDPAKLAAHGIGIDTVQQAIADANVNLATG
                     SLNGARQLLQVRSDGQLQKAAPYNHVIVAWRNGAPVTLDQLGHATDSVQNDQVMSWFN
                     GKRAMVLAIDRQPGSNTVATIDRVRAVLPGFEATLPPSITLQTLYDRSDSIRASVDDV
                     QFTLLLAGLLVVLVIYLFLGNASATLIPALALPVSVIGTFGVMYALGYSLDNLSLLAL
                     TLVVGFVVDDAIVMLENIMRHVEAGMEPYAASIKGAGEIGFTIFSMTLSLMAVFLPVM
                     FMGGIVGRLFHEFAVVISSAILISGFVSITLTPMLCSRFVRASTQRKSRVAAAFDVGF
                     NRTLDGYKRWLAWAVAHPRAVLGVFVASLLATAALFAVVNKDFIPAGDTGQLFANTEG
                     PDDISITAMAARQQQLAAIVGKDPNIAAYMSSVGSGGSRTTTNNGSIFMRLKPANERK
                     LDPDQIMQELRAKFARVPGIRAYLSNPPSIQVGGRASKAQYQYTLQSTDMDALYAESG
                     KVLAAFAKLPGFQDVTSDLDLNGPAVDIKVDRDKLAPLGLTMRQVQSALGTAFGAGQV
                     STIYGTATQYWVILEVKRALQDDPAILSQLYVTSNTGTLVPLDTVASFTRKAEPLTVN
                     HQGELPAVTISFNLAPGVSLGAAVDEIDGAMRRLDLPASITGSVQGTAQAFEQSMQGM
                     GLLLVLAVFVIYLVLGILYESFIHPLTILSGLPAAGVGALLTLLIFGAPLDLFSFVGI
                     VMLIGIVKKNAIMLIDFALERQRVEGMPPAQAIVEACHVRFRPIMMTTMAAFAGTLPI
                     ALGLGAGASSRRPLGLAVVGGLLVSQVLTLYLTPVIYLYMDRLRARLARPKPAETAAL
                     PGGEG"
     gene            complement(3769..>4012)
                     /locus_tag="VFM52_06410"
     CDS             complement(3769..>4012)
                     /locus_tag="VFM52_06410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008211538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8764834.1"
                     /translation="ALAGIREALARGPVAVRVQVPGVGGAPLAAKLDFVDNAVDTGTG
                     SAGRIVIDKGLAGGERVVTDGQLLLVDGSHVQVVAG"
BASE COUNT          658 a         1376 c         1393 g          585 t
ORIGIN      
        1 cagctccggc atcaggtcgc gcaccttgag gctcatcgag ctgagcgaca ccagcaggcg
       61 ccgcgcctgg tcggcggcct cgtccagcgc gtcgccggct gccttgcctt cgaccacctg
      121 ccgcaactgc agctcgatcg agcgcacctt ggccgagacg aaggtggggc cgtgctcggc
      181 aaactccacc agcgcggaga ggaactgcgc caccgcgggc agcatggcca ccatctcgcg
      241 cgcgcccacg cgctcctggc gcagccagcc gctggaacgg aagcgctcgt agatcgcgtt
      301 cgcgcgttcg agcagcgagg cgccgggcac gtcgccctcc tcgctctccc acgggtcgtc
      361 ggtgagcagg tagcgctcga tcgcggcggt gatctcgcgc cgcgggaagc cgatgctggg
      421 cggcaacggc gcgtccggcc cgaacagctc cgcgaacagc cgatacagca gcgcccagta
      481 gcgttcgcgg ttggcgctgg ccagcggccc gaacaggccg ccgggcacca ccgcgaacag
      541 gggcggcgcg gcgtcgatac tcaagcggga atccgtccgg tcatgtccag ggaatctgaa
      601 aactcccacg gattatgacc catgcgtgcc ccgccccgtc gcgtgccgct tcagccctcg
      661 ccgcccggca acgccgcagt ttcggcgggc ttcgggcgcg caagacgcgc gcgcagccga
      721 tccatgtaga gatagatcac cggcgtcagg tacagggtga gcacctgcga caccagcagg
      781 ccgccgacca cggcgaggcc gagcggacgc cgcgacgacg cgccggcgcc gaggccgagc
      841 gcgatcggca gcgtgccggc gaacgccgcc atcgtggtca tcatgatcgg gcggaaacgc
      901 acgtggcagg cttcgacgat ggcctgcgcc ggcggcatgc cttccacccg ctgccgttcg
      961 agcgcgaagt cgatcagcat gatcgcgttc ttcttgacga tgccgatcag catcacgatg
     1021 ccgacgaacg agaacaggtc gagcggcgcg ccgaagatga gcagcgtgag cagcgcgcca
     1081 acgccggccg cgggcaggcc ggaaagaatc gtcagcgggt ggatgaagct ctcgtacagg
     1141 atgccgagca cgagatagat cacgaacacc gcgagcacga gcagcaggcc catgccctgc
     1201 atcgactgct cgaacgcctg cgccgtgccc tgcacgctgc cggtgatcga ggccggcagg
     1261 tcgagccggc gcatcgcgcc gtcgatctcg tccaccgccg cgccgaggct cacgccgggc
     1321 gcgaggttga acgagatggt caccgccggc agctcgcctt ggtggttcac ggtgagcggc
     1381 tccgccttgc gggtgaaact cgcgacggtg tcgagcggca ccagcgtgcc ggtgttcgag
     1441 gtgacgtaga gctgcgagag gatggccggg tcatcctgca gcgcgcgctt cacttcgagg
     1501 atcacccagt actgcgtcgc ggtaccgtag atggtcgaca cctggccagc gccgaacgcg
     1561 gtgccgagcg cgctctgcac ctggcgcatg gtgagcccga gcggcgcgag cttgtcgcga
     1621 tccaccttga tgtcgaccgc cgggccgttc aggtcgaggt cgctggtgac atcctggaaa
     1681 ccgggcagct tcgcgaacgc ggccagcacc ttgcccgact ccgcgtacag cgcgtccatg
     1741 tcggtcgact gcagcgtgta ctggtactgc gccttcgacg cgcggccgcc gacctggatc
     1801 gacggcgggt tcgacaggta ggcgcggatg ccgggtaccc tggcaaactt cgcacgcagc
     1861 tcctgcatga tctggtccgg atcgagcttg cgctcgttcg cgggcttcag gcgcatgaag
     1921 atcgagccgt tgttggtcgt ggtgcgcgag ccgccggagc cgaccgacga catgtacgcc
     1981 gcgatgttcg ggtccttgcc gacgatcgcc gccagctgct gctggcgcgc cgccatcgcg
     2041 gtgatcgaga tgtcgtccgg gccctcggtg ttggcgaaca gctggccggt gtcgccggcc
     2101 gggatgaaat ccttgttgac caccgcgaac agcgccgccg tcgccagcag gctggcgacg
     2161 aacacgccga gcaccgcgcg cgggtgcgcc accgcccagg ccagccagcg cttgtagccg
     2221 tccagcgtgc ggttgaaacc gacgtcgaac gcggcggcga cgcgcgactt gcgctgcgtg
     2281 gaggcgcgca cgaagcggct gcacagcatc ggcgtgagcg tgatcgagac gaaaccggag
     2341 atcaggatgg cggaggagat caccaccgcg aattcgtgga acaggcggcc gacgatgccg
     2401 cccatgaaca tcaccggcag gaacaccgcc atcagcgaca gcgtcatcga gaagatggtg
     2461 aagccgattt cgcccgcgcc cttgatcgac gccgcgtacg gctccatgcc ggcctcgacg
     2521 tggcgcatga tgttttccag catcacgatc gcgtcgtcga cgacgaagcc gaccaccagc
     2581 gtcagcgcca gcagcgacag gttgtcgagg ctgtagccga gcgcatacat cacgccgaag
     2641 gtgccgatca ccgacaccgg cagcgcgagc gccgggatca gcgtggccga tgcattgccg
     2701 agaaacaggt agatcaccag caccaccagc agcccggcca gcagcagggt gaactgcacg
     2761 tcgtcgaccg aggcgcggat cgagtcggag cggtcgtaca gcgtctgcag ggtgatcgac
     2821 ggcggcagcg tcgcctcgaa gccgggcagc accgcacgca cgcggtcgat cgtcgccacg
     2881 gtgttggaac ccggctggcg gtcgatcgcg agcaccatgg cgcgcttgcc gttgaaccag
     2941 ctcatcacct ggtcgttctg cacgctgtcg gtggcgtgcc cgagctggtc gagcgtgacc
     3001 ggcgcgccgt tgcgccaggc gacaatgacg tggttgtacg gcgcagcctt ctgcaattgg
     3061 ccgtccgaac gcacctgcag cagctggcgc gcgccgttca acgagccggt ggcgaggttc
     3121 acgttggcat ccgcgatggc ctgctgcacg gtgtcgatgc cgatgccgtg cgccgcgagc
     3181 ttcgccgggt cgacgccgat gcgcacggcg tacttctgcg agccgaacac gttgacctgg
     3241 gcgacgcccg gcaccatcga caactcctgc gccagccgcg tctcgccgta gtcgtcgacg
     3301 gtggagagcg gcagcgtgtc ggagctgatc gcgaggtaca ggatcgcctt gtccgccggg
     3361 ttcaccttgc ggaacgtcgg cggcgtgggc atgttcgtcg gcagctggcg ctgcgcggcg
     3421 gaaatcgccg cctgcacgtc ctgcgccgcg gcgtcgatgt tgcgcgacag gtcgaaggtc
     3481 agcgtgatct gggtcgcgcc gagcgcgctg gtcgaggtca tctggctgat gccggcgatc
     3541 gtcgcgaact ggttttccag cggcgtcgcc accgccgtcg ccatcgtctc cggcgccgcg
     3601 ccaggcaggc tcgcgctgac cgagatggtg gggaaatcca cgttcggcag ttcgttcacc
     3661 gcgaggttgg gataagcgac gatgccgaac acgacgagcg cgatcatcag cagcgtcgtc
     3721 atcaccggcc ggcgaatgca cagcgcaggc acgttcacgg cgtcgcgctc atcccgccac
     3781 cacctgcacg tggctgccgt cgacgagcag cagctggccg tcggtcacca cgcgttcgcc
     3841 gccggcgagg cccttgtcga tcacgatgcg gccggcgctg ccggtgccgg tgtcgaccgc
     3901 gttgtcgacg aagtccagct tggcggcgag cggcgcaccg cccacgcccg gcacctgcac
     3961 gcgtaccgcg accggcccgc gcgccagcgc ctcgcggatg ccggccagcg cc
//
LOCUS       DASSVL010000365         2187 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_446397, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000365 DASSVL010000000
VERSION     DASSVL010000365.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2187)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2187)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2187
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_446397"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2187
                     /locus_tag="VFM52_06415"
     CDS             <1..>2187
                     /locus_tag="VFM52_06415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014038720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HET8764835.1"
                     /translation="SGVNLDSAARDVQAAINAALPDLPTGLNGAPSYEKANPNDDPII
                     AIALTSTTQSAAQLYNVADTLLAQRLRQLKGVSSVDIAGAATPAIRVDVNLRALNAMG
                     ISPDDLRNALTAANVTSPEGFLSNDHTTMAVSSTAQLHSADDFARLVIATKNGTPVRL
                     SEVAHVYAGTQDAYQSASFQGQPAILLYVYKKSDANVIATVDAVRAQLPALAGYLAPG
                     TTMTPFFDGTPTIRASLHEVQATLLISLAMVILTMALFLRRLAATLIAAIAVPLSLAG
                     AFVMMYILGYTLNNLTLLALVIAIGFVVDDAIVVIENIIRHIEAGMSRMDATLAGAKE
                     IGFTIVSITASLIAVFIPLLFASGYTGMFMHDFAVTLVSAIVMSALVSLTLTPALCGV
                     FLRGPAHAAAGESRLARVLDGFHAHMLSIYERALGFALRHTLAFALTPLVLIGLTWFL
                     FGVVKSGLFPPQDTGLIWGRATSSATVSFAQSEQRMQRLTHMLMADPDVATVGTRLGS
                     SRQGASGSFNIDLKTRAQGRKDDTFAVLARLTAKAAKYPDLNLRLRPLQDLPSASGGG
                     TSQGAEYQIGLQGSSLAELQEWLPKLVAELKKNPKLQDVGSDVDEGGLRQNIVVDRAT
                     AARLGVSMGAIDGALYDAFGQRQVSTIYSDINQYSVVVNALPNQTATPASINQLYVPS
                     SSGKMVPLTAIAKQVPGLAPSSITHRNQMTTMDLSFNLAPGVSMGQA"
BASE COUNT          346 a          798 c          713 g          330 t
ORIGIN      
        1 agcggggtga acctggactc cgccgcgcgc gacgtgcagg ccgcgatcaa cgccgcgctg
       61 cccgacctgc ccaccggctt gaacggcgcg ccgagctacg agaaggccaa cccgaacgac
      121 gacccgatca tcgcgatcgc gctgacctcg accacgcagt cggcggcgca gttgtacaac
      181 gtggccgaca ccttgctggc gcagcgcctg cgccagctga agggcgtctc ctcggtggac
      241 atcgccggcg ccgccacccc ggcgatccgg gtggacgtga acctgcgcgc gctgaacgcc
      301 atgggcatct cgcccgacga cctgcgcaac gcgctcaccg ccgccaacgt cacctcgccg
      361 gagggttttc tctccaacga ccacaccacc atggcggtca gctccactgc ccagctgcac
      421 agcgccgacg acttcgccag gctcgtcatc gcgacgaaga acggcacgcc ggtgcggctg
      481 tccgaggtgg cgcacgtgta tgcgggcacg caggacgcct accagtcggc ctccttccag
      541 ggccagccgg cgatcctgct gtacgtgtac aagaaatccg atgccaacgt gatcgccacg
      601 gtggacgcgg tgcgcgcgca gctgccggcg ctcgccggct acctcgcgcc gggcaccacg
      661 atgacgccgt tcttcgacgg cacgcccacc atccgcgcct cgctgcacga agtgcaggcg
      721 acgctgctga tctcgctggc gatggtgatc ctcaccatgg cgctgttcct gcgccggctc
      781 gcggccacgc tgatcgcggc gatcgcggtg ccgctgtcgc tcgccggcgc gtttgtgatg
      841 atgtacatcc tcggctacac gctgaacaac ctgacgctgc tcgcgctggt gatcgcgatc
      901 ggcttcgtcg tcgacgacgc gatcgtggtg atcgagaaca tcatccgcca catcgaggcc
      961 ggcatgagcc ggatggacgc gaccctggcc ggcgcgaagg agatcggctt caccatcgtc
     1021 tccatcaccg cctcgctgat cgcggtgttc atcccgctgc tgttcgccag cggctacacc
     1081 ggcatgttca tgcacgactt cgcggtgacc ctggtttccg cgatcgtgat gtcggcactg
     1141 gtgtcgctga cgctgacccc ggcgctgtgc ggcgtgttcc tgcgcggccc ggcgcacgcg
     1201 gccgccgggg agtcgcgcct ggcgcgcgtg ctggacggct tccatgcaca catgctttcg
     1261 atctacgagc gcgcactggg tttcgcgctg cgccacacgc tggccttcgc gctgacgccg
     1321 ctggtgctga tcggcctcac ctggttcctg ttcggcgtgg tcaagagcgg actgttcccg
     1381 ccgcaggaca ccggcctcat ctggggccgc gcgacctcca gcgcaacggt gtcgttcgcg
     1441 cagagcgagc agcgcatgca gcgcctcacc cacatgctga tggccgaccc cgacgtggcc
     1501 accgtcggca cccgcctcgg cagcagccgg cagggcgcga gcgggtcgtt caacatcgac
     1561 ctcaagaccc gcgcccaggg ccgcaaggac gacaccttcg ccgtgctggc gcggctcacc
     1621 gccaaggccg cgaagtaccc cgacctcaac ctgcgcctgc gcccgctgca ggatctgccg
     1681 agcgccagcg gcggcggcac cagccagggc gcggagtacc agatcggcct gcagggcagc
     1741 agcctcgccg agctgcagga gtggctgccc aagctggtcg ccgagctcaa gaagaacccc
     1801 aagctgcagg acgtcggcag cgacgtcgac gagggcgggt tgcgccagaa catcgtcgtc
     1861 gaccgcgcga ccgccgcgcg cctcggcgtg tcgatgggtg cgatcgacgg cgcgctgtac
     1921 gacgcgttcg gccagcgcca ggtgtccacc atctactcgg acatcaacca gtattcggtg
     1981 gtggtgaacg cgctgcccaa ccagaccgcg acgccggcgt cgatcaacca gctgtacgtg
     2041 ccgtccagca gcggcaagat ggtgccgctc accgcgatcg cgaagcaggt gccggggctg
     2101 gcgccgtcgt cgatcaccca ccggaaccag atgaccacga tggacctcag cttcaacctc
     2161 gcaccggggg tgtcgatggg gcaggcg
//
LOCUS       DASSVL010000366         2262 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_318658, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000366 DASSVL010000000
VERSION     DASSVL010000366.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2262)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2262)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2262
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_318658"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..186)
                     /locus_tag="VFM52_06420"
     CDS             complement(<1..186)
                     /locus_tag="VFM52_06420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017463108.1"
                     /note="with TatABE forms the twin-arginine translocation
                     complex which is involved in the transport of proteins
                     across the cytoplasmic membrane; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Sec-independent protein translocase subunit
                     TatC"
                     /protein_id="HET8764836.1"
                     /translation="MATLDEAPAQGMFVQLIELRSRLLKAAACVLVVLVALVPFANRL
                     YAELAAPLVARLPQGAHL"
     gene            complement(173..538)
                     /gene="tatB"
                     /locus_tag="VFM52_06425"
     CDS             complement(173..538)
                     /gene="tatB"
                     /locus_tag="VFM52_06425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007809989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0015031 - protein transport [Evidence IEA];
                     GO_process: GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Sec-independent protein translocase protein
                     TatB"
                     /protein_id="HET8764837.1"
                     /translation="MIELSFAKLFLLALVALVVLGPEKLPGAARTAGVLVRRLHAGWE
                     DVRAEVARELAVEEVRTTAKTAAATVTAATATLASAQDEFRASVRRMHQPFIERLAVL
                     DAPPPPAPVAPEDSRDGHA"
     gene            complement(546..779)
                     /gene="tatA"
                     /locus_tag="VFM52_06430"
     CDS             complement(546..779)
                     /gene="tatA"
                     /locus_tag="VFM52_06430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018972271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase TatA/TatE family
                     subunit"
                     /protein_id="HET8764838.1"
                     /translation="MGFDSIWHWGLLLLIVLLVFGTRKIAGMGTDLGKAVRGFKEATR
                     GEGEAGPAAEKLRADPPAGGTTVRQDEAVHATK"
     gene            complement(813..1637)
                     /locus_tag="VFM52_06435"
     CDS             complement(813..1637)
                     /locus_tag="VFM52_06435"
                     /EC_number="1.18.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015446711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004324 - ferredoxin-NADP+ reductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin--NADP reductase"
                     /protein_id="HET8764839.1"
                     /translation="MRDNLAAPAPAPHPHATLAGSTGRVIDVHHWNDTLFSFRTTRDP
                     AFRFTSGQFVMMGLMVDGKPLLRAYSIASASWEEHLEFLSIKVPHGQLTSRLMHLQPG
                     DPILVTHKPTGTLLLTGLNPGKRLYLLATGTGLAPFMSIVRDPDTYERFDHVVLVHGV
                     RRTSDLAYADYLTRELPAHEYLGEMVRGKLIYYPTVTREPFRHQGRIPAAIESGALAA
                     ATGLPPLDPAHDRVMLCGSPDMLRDLSALLDARGFHVSPRTREAGDYVLERAFVEK"
     gene            complement(1655..2260)
                     /locus_tag="VFM52_06440"
     CDS             complement(1655..2260)
                     /locus_tag="VFM52_06440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007806439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrous oxide reductase accessory protein NosL"
                     /protein_id="HET8764840.1"
                     /translation="MLVALLAACGAQVAAEHQAVEVRDGDVCAVCGMYLRDSPGPRGE
                     AWVNGEPKPLVFDSIRDFFAWVLQPEHQHTAGSLYVQNSALIDWRHPTGAAASFIDAR
                     RAFYVAWQPLPGSMGATLAPFADRAAADGFVAKHGGAVLTFAQVTPDLVASLDRQCPP
                     AGPGAAPACHAPPAGGTSTPEMDMTTPADAMAPLPAHQVSP"
BASE COUNT          333 a          743 c          868 g          318 t
ORIGIN      
        1 caggtgcgcg ccctgcggca ggcgcgccac cagcggcgcg gccagctcgg catacagccg
       61 gttcgcgaac ggcaccagcg cgaccagcac caccagcacg cacgcagcgg ccttcagcag
      121 gcgcgagcgc agctcgatga gctgcacgaa catgccctgc gccggggcct cgtcaagcgt
      181 ggccatcgcg ggaatcctcc ggcgcgaccg gcgcgggcgg tggtggagca tccagcacgg
      241 ccagccgctc gatgaagggc tggtgcatgc ggcgcacgct ggcgcggaac tcgtcctgcg
      301 cggaggcgag cgtggcagtg gccgcggtga ccgtggcggc ggcagtcttc gcggtggtgc
      361 gcacctcttc cacggccagc tcgcgggcga cctcggcgcg cacgtcctcc cagcccgcgt
      421 gcagccggcg cacgagtacg ccggcggtgc gcgcggcgcc gggcagtttt tccgggccca
      481 gcacgacgag cgcgaccagc gcgagcagga agagcttggc gaagctcagc tcgatcatcc
      541 tcggctcact tggttgcgtg cacggcttca tcctggcgca cggtggtgcc accggccggc
      601 ggatcggcac gcagcttttc ggcagcgggc ccggcttcgc cttcgccgcg ggtggcctcc
      661 ttgaaaccgc gtacggcctt gccgagatcg gtgcccatgc cggcgatctt ccgcgtgccg
      721 aagaccagca gcacgatcag gagcagcaaa ccccaatgcc agatactgtc gaaacccatg
      781 gtgtcgcctc gctgtgtgtg gatggatggg aactactttt cgacgaacgc gcgttcgagc
      841 acgtaatcgc cggcctcgcg ggtgcgcggg gagacgtgga agccgcgcgc atcgagcagc
      901 gcggagaggt cgcgcagcat gtccggactg ccgcacagca tcacccggtc gtgcgcggga
      961 tcgagtggcg gcaggccggt ggccgcggcc agcgcccccg actcgatggc ggcgggaatg
     1021 cgcccctggt ggcggaacgg ctcgcgggtg acggtggggt agtagatgag cttcccgcgc
     1081 accatctcgc cgagatattc gtgcgcgggc agttcgcggg tgaggtagtc ggcgtaggca
     1141 aggtcactgg tccggcgcac accgtgcacc agcaccacgt ggtcgaagcg ctcgtaggtg
     1201 tcgggatcgc gcacgatgct catgaacggc gcgaggccgg tgccggtggc gagcaggtac
     1261 agccgcttgc cgggattgag cccggtgagc agcagcgtgc cggtgggctt gtgggtgacg
     1321 aggatcgggt cgcccggctg caggtgcatc agccgcgagg tgagctggcc gtgcggcacc
     1381 ttgatcgaca ggaattccag atgctcctcc cagctggcgc tggcgatgga gtacgcgcgc
     1441 agcagcggct tgccgtccac catgaggccc atcatcacga attgcccgct ggtgaagcgg
     1501 aacgcgggat cgcgcgtggt gcggaacgag aacagcgtgt cgttccagtg gtggacgtcg
     1561 atgacgcgcc cggtcgagcc ggccagcgtg gcgtgcgggt gcggcgcggg cgcgggtgcg
     1621 gcgaggttgt cgcgcatggc ttcagtggcg gcgttcacgg cgagacctga tgtgcgggaa
     1681 gcggcgccat cgcgtcggca ggcgtggtca tgtccatctc gggcgtggac gtgccgccgg
     1741 ccggcggcgc gtggcaggcg ggggcggcgc ccgggccggc gggtgggcac tggcggtcga
     1801 ggctggccac gaggtcgggc gtgacctgcg cgaacgtgag caccgcaccg ccatgtttcg
     1861 cgacgaagcc gtcggcggcc gcgcggtcgg cgaacggcgc gagtgtcgcc cccatcgatc
     1921 ccgggagcgg ctgccaggcc acgtagaacg cgcggcgtgc gtcgatgaag ctggctgccg
     1981 cgccggtcgg atgccgccag tcgatgagcg cgctgttctg cacgtagagc gaacctgccg
     2041 tgtgctggtg ctcgggctgc aggacccagg cgaagaaatc gcggatggag tcgaacacga
     2101 gcggcttcgg ctcgccgttc acccaggcct cgccgcgcgg gccgggcgag tcgcgcaggt
     2161 acatgccgca cacggcgcac acgtcgccgt cgcggacttc caccgcctga tgctcggcgg
     2221 cgacctgggc cccgcaggcg gccagcaggg cgaccagcag ca
//
LOCUS       DASSVL010000367         3054 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1082429,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000367 DASSVL010000000
VERSION     DASSVL010000367.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3054)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3054)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3054
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1082429"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..356
                     /locus_tag="VFM52_06445"
     CDS             <1..356
                     /locus_tag="VFM52_06445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017159518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="3-hydroxyacyl-CoA dehydrogenase"
                     /protein_id="HET8764841.1"
                     /translation="KKDGQGLYTWQEGKPVKPEVDPDYVAAPDLADRMILALVNEAVA
                     CLADRVVEDADLLDAGVIFGTGFAPFRGGPIQYVRSEGAGVVRARLEQLAERHGARFT
                     PKDGWDDPALATATV"
     gene            complement(402..926)
                     /locus_tag="VFM52_06450"
     CDS             complement(402..926)
                     /locus_tag="VFM52_06450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007511269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2058 family protein"
                     /protein_id="HET8764842.1"
                     /translation="MSESLRDQLLKSGLAKPAHDKPRPHGRHGGGKAAPAKPAHEMDL
                     AKAYAIRAQAEAKERKAAQREAEEQARLRRERKQKLTVLLDGKALNKPDTELVRNFEY
                     GGKIRRMHVDAAQLAALNAGEMGIVQFGGRYLLVSGEVARQVRMIDPHHLALLVDPQA
                     PATDDDGVPDDLVW"
     gene            complement(941..1153)
                     /locus_tag="VFM52_06455"
     CDS             complement(941..1153)
                     /locus_tag="VFM52_06455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008213859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SlyX family protein"
                     /protein_id="HET8764843.1"
                     /translation="MAGIEERIADLEVRLTFIDDTVQALSTADADQALRIVQLEQLVH
                     QLRQELQAVRTNAAPDPHLEPPPPHY"
     gene            complement(1153..2496)
                     /locus_tag="VFM52_06460"
     CDS             complement(1153..2496)
                     /locus_tag="VFM52_06460"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008213858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose/GDP-mannose dehydrogenase family
                     protein"
                     /protein_id="HET8764844.1"
                     /translation="MKVTIFGTGYVGLVTGACLAEMGNHVVCVDIDAAKVERLKHGEV
                     PIFEPGLAPLVARNHENGQLDFTTDAAGAIAAAEVIFIAVGTPPDEDGSADLRYVLAV
                     AGTIGRLLDHDAVVVNKSTVPVGTADRVRAAIAAELATRGVQLGFEVASNPEFLKEGD
                     AVEDCLRPDRIVIGSSSPHAVEVLRKLYAPFNRNHDRSVVMDERSAELTKYAANAMLA
                     TKISFMNEIANIAERVGADVELVRQGIGADPRIGYHFIYPGIGYGGSCFPKDVQALAR
                     TARGVGYPARLLAAVEAVNHDQKTRLLDLMTRHFGGSMRGKTVALWGLAFKPNTDDMR
                     EASSRRLMEALWAAGARVRAFDPEARGEARRLYGERADLVLCEHAYEALEGADVLAIV
                     TEWKAFRSPDFARIRAALKEPAIFDGRNLYDPALVEEAGLAYYGIGRGRSLQVAR"
     gene            complement(2617..>3054)
                     /locus_tag="VFM52_06465"
     CDS             complement(2617..>3054)
                     /locus_tag="VFM52_06465"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017461144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HET8764845.1"
                     /translation="AIAKEAAKNKAAGDAFLAKNKTQPGVKTTASGLQYQVIKQGTGA
                     RPGPNDTVKIDYTGSFIDGQVFDASAKHNPPGAASIPLAGVIPGFREGLELMQVGGHY
                     KLFIPANLAYGAEPQPPMQPNATLIFDVTLVSTAPTPAAPASK"
BASE COUNT          444 a         1071 c         1018 g          521 t
ORIGIN      
        1 gcaagaagga tggccaaggc ctgtacacgt ggcaggaagg caagccggtg aagccggaag
       61 tcgatcccga ctatgtggca gcgcccgacc tggccgaccg catgatcctc gcactggtca
      121 acgaggccgt ggcctgcctc gccgatcgcg tggtggagga tgccgacctg ctcgacgccg
      181 gggtgatctt cggtaccggt ttcgcgccgt tccgcggcgg cccgatccag tacgtgcgca
      241 gcgaaggcgc gggcgtggtg agggcccggc tggaacaact tgccgagcgc cacggcgccc
      301 gcttcacgcc caaggacggc tgggacgatc cggcactggc cacggctacg gtgtgacggc
      361 cccggcggga gcgcccgaca ctcgccgggc gtgggttccg ctcaccacac gagatcgtcg
      421 ggcacgccgt cgtcgtcggt tgccggtgcc tgcgggtcga ccagcaacgc gaggtgatgc
      481 ggatcgatca tgcgcacctg cctggccact tcaccgctga ccagcagata gcgcccgccg
      541 aattgcacga tgcccatctc gccagcgttc aacgccgcca gttgcgccgc gtccacgtgc
      601 atgcggcgga tcttgccgcc gtattcgaag ttgcgcacca gctcggtatc cggcttgttc
      661 agcgccttgc cgtcgagcaa caccgtcaac ttctgcttgc gctcgcggcg cagccgcgcc
      721 tgctcctcgg cctcgcgctg cgccgccttg cgctccttcg cctcggcctg cgcgcggatc
      781 gcgtacgcct tggccaagtc catctcgtgc gcgggcttcg ccggcgcggc cttgccgccg
      841 ccgtgccggc cgtgcggccg cggcttgtcg tgcgccggct tggcgaggcc gctcttcagc
      901 agctggtcgc gcagggattc gctcatgaag gctccgttgc tcagtagtgc ggcggcggcg
      961 gttcgaggtg cggatcgggc gcggcgttgg tgcgcaccgc ctgcagctcc tggcgcaact
     1021 ggtgcaccag ctgttcgagc tgcacgatgc gcagcgcctg gtcggcatct gccgtcgaca
     1081 gcgcctgcac ggtgtcgtcg atgaaggtca gccgcacttc gagatcggcg atgcgctctt
     1141 cgatgcccgc catcagcgcg ccacctgcag gctgcgcccg cggccgatgc cgtagtacgc
     1201 caggccggct tcctccacca gcgccggatc gtacagattg cggccgtcga agatcgccgg
     1261 ctccttgagt gccgcgcgga tgcgcgcgaa atccgggctg cggaacgcct tccactcggt
     1321 gacgatcgcc agtacgtcgg caccctcaag cgcctcataa gcgtgctcgc acaacacgag
     1381 gtcggcgcgc tcgccgtaga ggcggcgtgc ctcgccacgc gcctcggggt cgaacgcacg
     1441 tacccgcgcg cctgcagccc acaacgcttc catcaggcgg cgactggatg cctcgcgcat
     1501 gtcgtcggta ttgggcttga acgccagccc ccacagcgcc accgtcttgc cgcgcatgct
     1561 gccgccgaag tggcgggtca tcaaatcgag caggcgcgtc ttctggtcgt ggttgaccgc
     1621 ctcgaccgcg gccagcaggc gggccgggta gccgacgccg cgcgccgtgc gcgccagcgc
     1681 ctgcacgtcc ttcgggaaac acgagccgcc ataaccgata ccgggataga tgaagtggta
     1741 gccgatgcgc gggtcggcac cgatgccctg gcgcaccagc tccacgtcgg ctcccacccg
     1801 ctccgcgatg ttggcgatct cgttcatgaa gctgatcttg gtcgccagca ttgcgtttgc
     1861 ggcgtacttg gtcagctccg ccgaacgctc gtccatcacc acgctgcggt catggttgcg
     1921 gttgaacggc gcatacagct tgcgcaacac ctccaccgca tgcgggctgg agctgccgat
     1981 gacgatgcgg tccgggcgca ggcaatcctc gaccgcatcg ccttccttca ggaactcggg
     2041 gttggaagcg acttcgaacc cgagctgcac gccgcgcgtc gccagctcgg cggcaattgc
     2101 cgcgcgcacg cgatcagcgg tgcccaccgg caccgtggac ttgttgacca ccacggcatc
     2161 gtgatcgagc aggcggccaa tcgtcccggc caccgccagc acgtaacgca gatcggcgct
     2221 gccgtcctcg tccggcggcg tgcccaccgc aatgaagatc acctcggcgg cggcgatggc
     2281 gccggccgcg tcggtggtga aatccagctg gccgttctcg tggttgcgcg ccaccagcgg
     2341 cgccaggccg ggttcgaaaa tcggcacctc gccgtgcttg aggcgctcga ccttggccgc
     2401 gtcgatgtcg acgcacacca cgtggttgcc catctcggcg aggcaggcgc cggtgacgag
     2461 ccccacgtag ccggtgccga agatcgtgac tttcattgca ttgccggttg ttggcgaatc
     2521 cagccgcgca ttctacccgg tgcccaccgg gcaccgccaa agcgaagggg cacgaatcgc
     2581 ttcgtgcccc ttcgttcaaa ccggtgcgag cgcggcttac ttgctggccg gtgccgccgg
     2641 cgtcggtgcg gtgctgacca gcgtcacgtc gaagatcaac gtggcattgg gctgcatcgg
     2701 cggctgcggc tcggcgccat aggccaggtt cgccgggatg aacagcttgt agtggccgcc
     2761 cacctgcatc agctccaggc cctcgcggaa gccgggaatc acgccggcca gcgggatcga
     2821 ggccgcaccc ggcggattgt gcttggccga ggcatcgaac acctggccgt cgatgaacga
     2881 gccggtgtag tcgatcttca cggtgtcgtt cggacccgga cgcgcgccgg taccctgctt
     2941 gatgacctga tattgcaggc ccgatgccgt ggtcttcacg cccggctggg tcttgttctt
     3001 ggcgaggaac gcatcgccgg ccgccttgtt cttcgcggct tccttcgcga tggc
//
LOCUS       DASSVL010000368         3140 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1350401,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000368 DASSVL010000000
VERSION     DASSVL010000368.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3140)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3140)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3140
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1350401"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1531
                     /locus_tag="VFM52_06470"
     CDS             <1..1531
                     /locus_tag="VFM52_06470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007810225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="GspE/PulE family protein"
                     /protein_id="HET8764846.1"
                     /translation="VVSHAYAKRHRIRPVAAATGEVTFATAEPFDAAWAADLSHMLRR
                     DVHRVVSSPIDINRYLQEFYGVQRSIQLAQDAKNAGGYENSAAILNFEQLVELGKSGE
                     VGADDRHVVHIVDWLLQYAFEQRASDIHLEPRREAGQIRFRIDGVMHKVFELPPSVMA
                     AVTARIKILARMDVAEKRRPQDGRIKTRSPGGREVELRISSMPTAFGEKVVMRIFDPD
                     LVVKDFAQLGFSPEETRHWRHMVERPHGIVLVTGPTGSGKTTTLYSTLKHLATPEMNV
                     CTVEDPIEMVSSEFNQMQVQPAIDLDFASGVRTLLRQDPDIIMIGEIRDLETAQMAVQ
                     ASLTGHLVLSTLHTNDAPSAVTRLLDLGVPHYLIQSTLTGVVAQRLVRTLCPYCKEET
                     TQDPHEWAALTRGWPLPLPDKVCKPVGCLECRNTGFMGRTGIYEMMPISPRLRGLVTA
                     QTDLGRFGDEALAEGMRPLRISAAAQVARGLTTVQEVLAVLPPIENLDGAPGITPDTV
                     A"
     gene            1528..2262
                     /locus_tag="VFM52_06475"
     CDS             1528..2262
                     /locus_tag="VFM52_06475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008437289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine amidotransferase"
                     /protein_id="HET8764847.1"
                     /translation="MKPILIIRTGRAPDRIRGRFGDFPHWFRVAARLAGTHTRSIDVE
                     GGETLPDPRDVAGAIITGSAAMVTERSAWSERTAGWIRSAMDVELPLFGVCFGHQLMA
                     HALGGKVDYLPGGREIGTQPITTLAAAQRDPLAGSLPARFRAHTTHEQSVLEPPPGAI
                     VLARSARDPNQLLRYGPHALSSQFHPEFSADVMRAYVARKRDAMRREGSDPTRIYREV
                     GATPIARRLLQHFALRRGLDRPPRKR"
     gene            complement(2264..2947)
                     /locus_tag="VFM52_06480"
     CDS             complement(2264..2947)
                     /locus_tag="VFM52_06480"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019662230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rhomboid family intramembrane serine protease"
                     /protein_id="HET8764848.1"
                     /translation="MFVHVDTRRKRQWRWATVLLVCLCVLCFLWLAALPPGTRISVLQ
                     EWGTVPANIFDAHEPIWPQLVDPSLLRLFTALFIHVTWLHLLSNLLFLVIFGLPGERA
                     LGSLRFLLLFTIGGVVANLIGAVSLAGVRLPIIGCSGAVSAVVGTYVALFPRARLGLV
                     LPLGLYLQFVRVPAYLLIGIWILLQLLFSYAGASYGAYVWWAHIGGFLFGLAFALLSR
                     DAIARRLRR"
BASE COUNT          568 a         1103 c         1019 g          450 t
ORIGIN      
        1 ggtggtgagc catgcctatg cgaagcggca tcgcatccgg ccggttgccg cggcgaccgg
       61 cgaggtgacc tttgccaccg ccgagccgtt cgacgccgcg tgggccgccg acctgtcgca
      121 catgctgcgc cgggacgtgc accgcgtggt gtccagcccg atcgacatca accgctacct
      181 gcaggagttc tacggcgtcc agcgctcgat ccagctcgca caggatgcga agaacgccgg
      241 cggctacgag aacagcgcgg cgatcctcaa cttcgagcag ctggtcgagc tcggcaagag
      301 cggcgaggtc ggcgccgacg atcgccacgt ggtgcacatc gtcgactggc tcctgcagta
      361 cgccttcgag cagcgcgcct cggacatcca tctcgaaccg cgccgcgagg ccgggcagat
      421 ccgcttccgc atcgacggcg tgatgcacaa ggtgttcgag ctgccgccgt cggtgatggc
      481 cgcggtgacc gcgcgcatca agatcctcgc acgcatggac gtggccgaga agcgccgccc
      541 gcaggacggc cgcatcaaga cccgctcgcc gggcgggcgc gaggtcgaac tgcgcatctc
      601 cagcatgcca accgcgttcg gcgaaaaggt cgtcatgcgc atcttcgacc ccgacctggt
      661 ggtcaaggat ttcgcgcaac tcggtttctc gccggaggag acccggcact ggcggcacat
      721 ggtcgagcgc ccgcacggca tcgtgctggt gaccggacca accggttcgg gcaagaccac
      781 gacgctgtac tccacgctca agcacctcgc cacacccgag atgaacgtgt gcacggtcga
      841 ggacccgatc gagatggttt cgtccgagtt caaccagatg caggtgcagc cggcgatcga
      901 cctcgacttt gcctccggcg tgcgcacgct gctgcgccag gatccggaca tcatcatgat
      961 cggcgagatc cgcgacctcg aaaccgcgca gatggcggtg caggcctcac tgacggggca
     1021 cctcgtactc tccacgctgc ataccaacga cgcgccgagc gcggtcaccc gcctgctcga
     1081 cctcggcgtg ccgcattacc tgatccagtc gactctgacc ggcgtcgtcg cgcagcgcct
     1141 ggtgcgcacc ctgtgcccgt actgcaagga agaaaccacg caggatccgc acgaatgggc
     1201 ggcgctcacc cgcggctggc cactgccgct gccggacaag gtatgcaagc cggtcggttg
     1261 cctcgagtgc cgcaacaccg gcttcatggg ccgcaccggc atctacgaga tgatgccgat
     1321 ctcgccgcgc ctgcgcgggc tggtcaccgc gcagaccgat ctcggccgtt tcggcgacga
     1381 ggcgctggcc gaaggcatgc gcccgctgcg catctccgct gcagcccagg tcgcccgcgg
     1441 gctgacgacg gtgcaggaag tccttgccgt gctgccgccg atcgaaaatc tcgacggcgc
     1501 gccgggcatt acaccggata ccgtcgcttg aagccgatcc tcatcatccg caccggccgt
     1561 gccccggatc gtatccgcgg ccgcttcggc gattttccgc actggttccg tgttgccgct
     1621 cgcctggccg gtacgcacac ccgcagcatc gacgtggagg gcggcgagac cttgcccgac
     1681 ccgcgtgacg tcgctggcgc gatcatcacc ggctcggccg ccatggttac cgagcgttcc
     1741 gcctggagcg aacgcaccgc cggctggatc cgcagcgcga tggacgtcga gctgccgctg
     1801 ttcggcgtct gcttcgggca ccagctcatg gcgcacgcgc tcggcggcaa ggtcgactac
     1861 ctgcccggtg gccgcgaaat cggcacgcag ccaatcacca ccctggctgc cgcgcagcgc
     1921 gatccgctgg ccggttcctt gccggcgcga ttccgcgcac acaccaccca cgagcaaagc
     1981 gtgctggagc caccgcccgg cgccatcgtg ctcgcgcgtt ccgcgcgtga cccaaaccag
     2041 ctgctgcgct acgggccgca tgcgctgagc tcgcagttcc atccggagtt cagtgccgac
     2101 gtgatgcgcg cctacgtggc acgcaagcgt gacgccatgc gccgggaggg cagcgacccg
     2161 acccggatct accgcgaagt cggcgccacg ccgatcgccc gtcgtctgct gcagcacttc
     2221 gcactgcgcc gcggtctcga ccgcccgccg cgcaaacgtt gactcaccgg cgcaggcggc
     2281 gcgcgatcgc atcgcgcgac aacagcgcaa acgcgagccc gaacaagaag ccgccgatgt
     2341 gcgcccacca cacataggcg ccgtagctgg cgcccgcgta gctgaaaagg agttgcagca
     2401 ggatccagat gccgatcagc aggtaggccg gcacgcgcac gaactgcagg tacaggccca
     2461 gcggcaacac caggccaagc cgcgcgcgcg gaaacaacgc aacgtaggtg ccgaccaccg
     2521 ccgacaccgc gccactgcag ccgatgatcg gcagccgcac gccggccagc gacactgcgc
     2581 caatcaggtt cgcgacgaca ccgccaatgg tgaacagcag caggaatcgc agggagccaa
     2641 gcgcccgctc acccggcaac ccgaatatca ccaggaacag caggttgctc agcagatgca
     2701 gccaggtgac gtggatgaac agcgcggtga acaggcgcag cagcgaaggg tcgaccagct
     2761 gcggccagat cggctcgtgg gcgtcaaaga tgtttgccgg gacggtgccc cattcctgca
     2821 ataccgatat tcgggtcccg ggcggcagcg ccgcgagcca caggaaacac agtacgcaca
     2881 ggcataccaa cagcacggtt gcccatcgcc actgtcgctt gcggcgggtg tcgacgtgga
     2941 cgaacaaggg cactccggtg gaagtggttc ggggcgtcaa tgataggggc accggcgagg
     3001 acaccggtga ggcgggatat tttgggccgt gaaaaggtga acgccccgac gagtaggctc
     3061 gttggggcgt tcgggatagg accctggcgg tgacctactc tcgcatgcag aagcacacta
     3121 ccatcggcgc ggctgcgttt
//
LOCUS       DASSVL010000369         2723 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_714911, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000369 DASSVL010000000
VERSION     DASSVL010000369.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2723)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2723)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2723
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_714911"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..753
                     /locus_tag="VFM52_06485"
     CDS             <1..753
                     /locus_tag="VFM52_06485"
                     /inference="COORDINATES: protein motif:HMM:NF018168.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body rod C-terminal
                     domain-containing protein"
                     /protein_id="HET8764849.1"
                     /translation="SVPLTANPDGTLSAEGLTFSVSGSAQVGDSFEIRPTQNAASGIA
                     MATTNPSAIAASAALAATPGNTNTGAASVGSVTVADSANPALFTPATVTFGAGNTYSV
                     NGGASQAFTPGQPITFNGWSLALSGTPAVGDTFAVGRNSAGLNDNTNALDLTNLANAG
                     TLDGGTLSATGAYAALTNQIGLAGSMASNDLATQTGLFNQATSAQQSAAGVNLDEEAA
                     NLVKYQQSYQASAQVIATAQTLFASLITAIQA"
     gene            767..1978
                     /gene="flgL"
                     /locus_tag="VFM52_06490"
     CDS             767..1978
                     /gene="flgL"
                     /locus_tag="VFM52_06490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017461986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009424 - bacterial-type flagellum hook
                     [Evidence IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-associated protein FlgL"
                     /protein_id="HET8764850.1"
                     /translation="MIRLSTSWMFQQSLSSMLGAQSGLADIQNQVTSGSRINLASDDP
                     AGAAQAVSLNHVIASTAQYSSNIDNANARLSTEANTLTSFNSLLDQVRSMTLQGINGT
                     LSNADRSDMATQLTQIRAQLVQLANTTDANGNALFAGTATTSTPFVVNGNGSVSYAGN
                     ASNQMSQIGDSLRIPDSDAGANLFMNLPTGNGSFTASAAAANTGTLLVGSTSVSDGAA
                     WKAATAGGPVDYQTSFDAAGNWTATDAGGATVATGAYQDGGSISFNGMSIALSGTPAA
                     GDSVSVKSGGTQDVFSTLSNLIGALQDGTLSDTQRSNQISRQLESIDQAQNSVLGTQT
                     DVGGRINRIAQQKTTYSDLTLTYQTTLSGVQDTDMASAISKLMLQSTALQASQQTFAK
                     VQGMSLFNYIH"
     gene            2092..>2723
                     /locus_tag="VFM52_06495"
     CDS             2092..>2723
                     /locus_tag="VFM52_06495"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003465689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HET8764851.1"
                     /translation="MPSTIPAVDHPALRNLLGEARVRQGVDEIWAMIGATFEKTQKEL
                     PQQRAMARKELSFHDHVKLLGYLCLLIGEAAGDLVEIGVWKGKSLCFMSQMCGKKRRV
                     FGIDPMELDHQADELGFYHDKLFPEATLIRGYSELAVERFQVNAPNVVLLHIDGGHAG
                     RNVLLDFLLYSPSVVSGGFVVFDDYGDHDYSPEVGPAVDLLRVGGYFRDFR"
BASE COUNT          514 a         1009 c          818 g          382 t
ORIGIN      
        1 agcgtgccgc tcaccgccaa cccggacggc acgctcagcg ccgaaggcct gaccttctcc
       61 gtctccggca gcgcccaggt gggcgacagc ttcgagatcc ggcccacgca gaacgccgcc
      121 agcggcatcg cgatggccac caccaatccg tccgcgatcg ccgcctccgc cgcactggcc
      181 gcgacgccag gcaatacgaa taccggcgcc gccagcgtgg gttcggtcac cgtcgccgac
      241 agcgccaacc cggcgctgtt caccccggcc accgtcacct tcggtgccgg caacacctac
      301 agcgtgaacg gcggcgccag ccaggctttc accccgggcc agccgatcac cttcaacggc
      361 tggagcctcg cgctctccgg cacgcccgcc gtcggcgaca ccttcgcggt gggccggaac
      421 agcgccgggc tcaacgacaa caccaacgcg ctcgacctca ccaacctcgc caacgccggc
      481 acgctcgacg gcggcacctt gtcggccacc ggcgcgtacg ccgcgctcac caaccagatc
      541 ggcctggccg gcagcatggc cagcaacgac ctggccaccc agaccggcct gttcaaccag
      601 gccaccagcg cgcagcagag cgccgccggc gtcaacctcg acgaagaggc ggccaacctc
      661 gtgaagtacc agcagtccta ccaggcctcg gcgcaggtca tcgccaccgc gcagacgctg
      721 ttcgccagcc tgatcaccgc gatccaggcg tgagggagct ccagccatga tccgcctgtc
      781 caccagttgg atgttccagc aatccctgtc cagcatgctc ggcgcgcaaa gcgggctggc
      841 ggacatccag aaccaggtca ccagcggcag ccgcatcaac ctcgcgtccg acgatccggc
      901 cggcgcggcg caggcggtgt cgctcaacca cgtcatcgcc agcaccgcgc agtacagcag
      961 caacatcgac aacgccaacg cgcggctgtc gaccgaggcc aacacgctca cctcgttcaa
     1021 cagcctgctc gaccaggtgc gttcgatgac gctgcagggc atcaacggca cgctgtccaa
     1081 tgccgaccgc agcgacatgg ccacccagct cacccagatc cgcgcgcagc tggtgcagct
     1141 ggccaacacc accgacgcca acggcaacgc gctgttcgcc ggcaccgcca ccaccagcac
     1201 gccgttcgtg gtgaacggca atggttcggt gagctacgcc ggcaacgcca gcaatcagat
     1261 gagccagatc ggcgacagcc tgcgcattcc cgacagcgac gccggcgcca acctgttcat
     1321 gaacctcccc accggcaacg gctcgttcac cgccagcgcc gcggccgcca acaccggcac
     1381 gctgctcgtc ggcagcacca gcgtcagcga cggcgccgcg tggaaggccg ccaccgccgg
     1441 cggcccggtc gattaccaga ccagcttcga cgccgccggc aactggacgg ccaccgatgc
     1501 cggcggcgcg acggtggcca ccggcgccta ccaggacggc ggcagcatca gcttcaacgg
     1561 catgtccatc gccttgagcg gcacccccgc cgccggcgac agcgtgagcg tcaagagcgg
     1621 cggcacgcag gatgtgttca gcacgctcag caacctcatc ggcgctctgc aggacggcac
     1681 gctgtccgac acccagcgca gcaaccagat cagccgccag ctcgaatcca tcgaccaggc
     1741 gcagaacagc gtgctgggca cacagaccga cgtcggcggc cggatcaacc gcatcgccca
     1801 gcagaaaacc acctacagcg acctcacgct cacctaccag accaccctct ccggcgtgca
     1861 ggacaccgac atggccagcg ccatcagcaa gctcatgctg cagtccaccg ccctgcaggc
     1921 gtcgcagcag acgtttgcga aggtgcaggg gatgagtttg ttcaactaca tccactgagg
     1981 cgggcgcagt gtgccgggcc gcccacctat ggacggttcc gccgcgccat ggtcgtcgcc
     2041 tcgcgatcgg tgctctgagc cggacgcgat ataaccgagg agtcacctgc gatgccgtca
     2101 accattccgg ccgtggatca cccggcgcta cgcaacctgc tcggcgaggc gcgggtgagg
     2161 cagggtgtcg acgaaatctg ggccatgatc ggcgccacct ttgagaaaac ccagaaggaa
     2221 ctcccgcagc agcgggccat ggcccgcaag gaactctctt tccacgatca cgtgaagctg
     2281 ctcggctacc tctgcctgct catcggtgag gcggcaggtg atctcgtcga aatcggggta
     2341 tggaagggca agtcactgtg cttcatgagc cagatgtgcg gcaagaagcg gagggtgttc
     2401 ggcatcgacc cgatggaact cgaccaccag gccgatgagc tgggtttcta ccacgacaag
     2461 ctctttcctg aagccacctt gatccgtggc tattcggagc tggcggtgga gcgctttcag
     2521 gtgaacgcgc ccaacgtggt gctgctgcac atcgatggcg gccatgccgg ccgcaacgtg
     2581 ctgctcgatt tcctgctgta ttcccccagc gttgtgagcg gcggcttcgt ggtgttcgac
     2641 gactacggcg atcacgacta ctcgccggag gttggccctg ctgtcgatct gttgcgggtg
     2701 ggcggctatt tccgcgattt ccg
//
LOCUS       DASSVL010000370         3584 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_333634, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000370 DASSVL010000000
VERSION     DASSVL010000370.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3584)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3584)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3584
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_333634"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..534)
                     /locus_tag="VFM52_06500"
     CDS             complement(<1..534)
                     /locus_tag="VFM52_06500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018974572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HET8764852.1"
                     /translation="MNQVLPAAPAADDLRQQLAAAETQLNQVVLGKPRQVKLALACLI
                     AGGHLLLEDVPGVGKTTLAHALAATFALDFQRVQFTSDLLPSDIVGVSVYERETGSFR
                     FHPGPIFGGLLLADEINRATPKTQSALLEAMAEGQVTVDGQTHALPQPFFVVATQNPL
                     DLAGTFPLPDSQLDRFML"
     gene            complement(628..1221)
                     /locus_tag="VFM52_06505"
     CDS             complement(628..1221)
                     /locus_tag="VFM52_06505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017462272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030428 - cell septum [Evidence IEA];
                     GO_process: GO:0000917 - division septum assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Maf family nucleotide pyrophosphatase"
                     /protein_id="HET8764853.1"
                     /translation="MNPPSPPRVVLASTSRYRAELLRRLMADFEPCRPDVDETPRPGE
                     PPAMRAERLAIAKAEAVAAGRRDALVIGSDQVAELDGDLLRKPGSIANACAQLAASSG
                     HAVAFHTAVCVVDTRNGRRTSRIDRTQVQFRTLSSAEIERYVAREHPLDCAGSFKCEG
                     LGISLFERIDSSDPTALIGLPLIALAQLLRAAGRSLP"
     gene            complement(1218..1667)
                     /locus_tag="VFM52_06510"
     CDS             complement(1218..1667)
                     /locus_tag="VFM52_06510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007513166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8764854.1"
                     /translation="MDLSLTYGVAVLLVLSTLAGWLLALRRRQGRRMQALQQLLDLAD
                     RLETDLRNCRSGLEQAHAVMTVNPDLPGSSEQDARHAVDAGLQALLRQRIWIRDHAAD
                     ASPRELDTAAIAMRTSRDRLQPLLCALSAAQHDLDSAMREHIHRDAE"
     gene            1814..2329
                     /locus_tag="VFM52_06515"
     CDS             1814..2329
                     /locus_tag="VFM52_06515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015447401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YceD family protein"
                     /protein_id="HET8764855.1"
                     /translation="MSVMLPESVDAWRAVAARRSFEGTLPVASLKRLGEVLAGTDGEL
                     RYRLDFGSDAFGTEGVEVHVQAPLTLLCQRTLEPFVLPVTVDTRLGLIRREQDEAGLP
                     PGSEPLLVAADGQVHPADVIEDELLLAVPLVPMNPDSSLPDAVLADDAGDAAADEQRD
                     NPFAALRGLKQ"
     gene            2395..2589
                     /gene="rpmF"
                     /locus_tag="VFM52_06520"
     CDS             2395..2589
                     /gene="rpmF"
                     /locus_tag="VFM52_06520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019302036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L32"
                     /protein_id="HET8764856.1"
                     /translation="MAVAKSRRTPSTRGMRRAHDKLKTVQLSTDPTTGEVHLRHHVTA
                     DGYYRGKKVIETKGAVSVED"
     gene            2740..>3584
                     /locus_tag="VFM52_06525"
     CDS             2740..>3584
                     /locus_tag="VFM52_06525"
                     /EC_number="2.3.1.180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014646186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0033818 -
                     beta-ketoacyl-acyl-carrier-protein synthase III activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase III"
                     /protein_id="HET8764857.1"
                     /translation="MAPIYSRIIATGSALPERVVSNVDLEKIVDTSDEWIRTRTGIRQ
                     RHIAADGETTGDLAFLAAQRALEAAGVKASELDLIVLGTTTPDIIFPSTACLVQHRLG
                     ANGCAAFDVNAACSGFMYALGVADKFVKSGQAKKALVIGAETLTRMIDWHERETCVLF
                     GDGAGAVVLEASDEPGVSATCLHADGGYKELLYNPVGVSAGFSDEKNHGVRIRMSGRE
                     VFKVAVKTLEMLVDETLTAANMHADQIDWLIPHQANLRIIEATAKRLGMSMEQVIVTV
                     DKHANT"
BASE COUNT          582 a         1135 c         1305 g          562 t
ORIGIN      
        1 cagcatgaag cggtcgagct gcgagtcggg cagcggaaac gtgccggcga gatcgagcgg
       61 gttctgggtg gcgacgacga agaacggctg cggcagcgca tgggtctggc cgtcgaccgt
      121 cacctggcct tcggccatcg cctcgagcag ggcgctttgc gtcttcggcg tcgcgcggtt
      181 gatctcgtcg gcgagcagca ggccgccgaa gatcgggccg gggtggaagc ggaagctgcc
      241 ggtctcacgc tcgtagacgc tgacgccgac gatgtccgac ggcagcaggt cactggtgaa
      301 ctgcacgcgc tggaaatcca gcgcgaaggt ggccgcgagg gcatgcgcga gcgtggtctt
      361 gccgacgccc ggcacgtctt ccagcagcag gtggccaccg gcgatcaggc aggcgagcgc
      421 gagcttgacc tgccgcggct tgccgagcac cacctggttc aactgggttt cggcggcagc
      481 cagttgctgg cgcaggtcat cggcggcggg ggccgcgggc aacacttggt tcatggacga
      541 aactcgtggc gaggcgttcc cgggcagcgc cggggcatgg gccgagcgta gccagcaacg
      601 tgccgacgcg ccatgaaggc ggtcccatca gggcagggac cggccggcag cgcgcagcag
      661 ttgcgccagt gcgatcagcg gcaggccgat cagcgcggtc gggtcgctgc tgtcgatgcg
      721 ctcgaacagg ctgatgccca gcccttcgca cttgaagctg ccggcgcaat caagcgggtg
      781 ttcgcgcgcc acgtagcgtt cgatttcggc gctggacagc gtgcggaact gcacctgcgt
      841 gcggtcgatc cggctggtgc gacgcccgtt gcgggtgtcg acgacgcata cggcagtgtg
      901 gaaagccacc gcgtggccgc tgctggccgc caactgggca caggcatttg cgatgctgcc
      961 gggcttgcgc agcaggtcgc catccagttc ggcgacctgg tcggaaccga tgacgagcgc
     1021 gtcgcgccgg ccggcggcaa ctgcttccgc cttggcgatg gcgaggcgtt cggcgcgcat
     1081 ggcaggtggc tcgcccggcc gcggggtttc atcgacgtcc gggcggcacg gctcgaagtc
     1141 cgccatcagg cggcgcagca gttcggcgcg gtagcgcgag gtggaggcca ggacgacgcg
     1201 cggcggcgaa ggcgggttca ttcggcatcc cgatggatgt gttcgcgcat cgcgctgtcc
     1261 aggtcgtgct gggctgcgct gagtgcgcac agcaagggtt gcaggcggtc gcggctggtg
     1321 cgcatcgcaa tggctgcggt atccagttcg cgcgggctgg catcggcggc gtggtcgcgg
     1381 atccagatgc gctgccgcag cagtgcctgc aggccggcgt cgacggcgtg ccgcgcatcc
     1441 tgttcgctgc tgcccggcag gtccgggttg accgtcatta ccgcgtgcgc ctgctcgagt
     1501 ccgctgcggc agttccgcag gtcggtttcc agccggtcgg cgaggtcgag aagctgctgc
     1561 agcgcctgca tgcgccggcc ttgccgccga cgcagcgcga gcagccagcc ggcgagcgtg
     1621 gacagcacca gcagtaccgc cacgccatag gtcagggaaa ggtccacgcg actggctttg
     1681 cgagaatgga gttgcagtct gccgcaagca tgctggatca ggcaaaatcc cgcgctggac
     1741 cggcgtgcgg gcggtctcgc ggccgggcat cgcaattgac ttcggtccgg cgcatattta
     1801 acattcactg gttatgtccg tgatgttgcc cgaatcggtc gatgcgtggc gtgccgtcgc
     1861 ggcgcggcgt tcgttcgaag gcacgttgcc ggtggccagc ctcaagcggt tgggcgaggt
     1921 gctggcgggt acggacggcg aactgcgcta ccggctggat ttcggcagcg acgcgttcgg
     1981 caccgagggc gtggaggtgc atgtgcaggc cccgctcacg ttgctgtgcc agcgcacgct
     2041 ggagccgttc gtgttgccgg tcacggtgga tacccgcctc gggctgatcc gccgcgagca
     2101 ggacgaggca gggttgccac ccgggagtga gccgttgctg gtggccgcgg atggccaggt
     2161 gcatccggcg gacgtgatcg aggacgaact gctgctggcg gtgccgctgg tgccgatgaa
     2221 cccggacagc agcttgccgg acgcggtgct tgcggatgac gcgggcgacg cggcggcaga
     2281 cgaacagcgg gacaatccgt tcgcggcctt gcgcggactg aagcagtaaa gcggtcgggc
     2341 ctggtggccg cgaccatgta gctaccgaac atcgagttca gttggagaac catcatggcc
     2401 gttgccaaga gccgccgtac cccgtccacc cgcggcatgc gccgcgcgca cgacaagctg
     2461 aagaccgtgc agctgtcgac cgacccgacc actggcgagg tgcacctgcg tcaccacgtc
     2521 accgccgacg gctactaccg cggcaagaag gtcatcgaga ccaagggtgc ggtgtcggtc
     2581 gaggactgat cgcgccagcg ggtttccgga cggaagcccg cctgcccgga tcgagtggaa
     2641 cggcgcggcg acgcgccgtt tcgcgttatg aggtccggac ggttgcgcat gcgccgccca
     2701 gggcgttcaa ttcacggttt acgtttgacg gaaaacggca tggccccgat ctactcccgc
     2761 atcatcgcca ccggcagcgc cttgcccgag cgtgtcgtca gcaacgtcga tctggagaag
     2821 atcgtcgaca ccagcgacga atggatccgc acccgcaccg gcatccgcca gcgccacatc
     2881 gccgccgacg gcgagaccac cggcgacctg gccttcctcg ccgcgcagcg cgcgctggaa
     2941 gcggccgggg tgaaggcgtc ggagctggac ctgatcgtgc tgggcacaac cacgccggac
     3001 atcatcttcc cgtccaccgc ctgcctggtg cagcatcgcc tgggcgccaa cggctgcgcc
     3061 gcgttcgacg tcaacgccgc ctgctcgggc ttcatgtacg cgctgggcgt cgccgacaag
     3121 ttcgtcaaga gcggccaggc gaagaaggca ctggtgatcg gcgccgaaac gctgacccgc
     3181 atgatcgact ggcacgagcg cgaaacctgc gtgctgttcg gcgacggcgc tggtgcggtg
     3241 gtgctggaag cgtcggatga acccggcgtg agcgccactt gcctgcacgc ggatggcggt
     3301 tacaaggaac tgctgtacaa cccggtcggc gtgtcggccg gattcagcga cgagaagaac
     3361 cacggcgtac gcatccgcat gagcggacgc gaggtgttca aggttgcggt gaagacgctc
     3421 gagatgctgg tggacgaaac cctcaccgcg gccaacatgc atgcggacca gatcgactgg
     3481 ctgatcccgc accaggccaa tctgcgtatc atcgaagcga cggccaagcg gctcggcatg
     3541 tcgatggagc aggtgatcgt caccgtggac aagcacgcca acac
//
LOCUS       DASSVL010000371         2836 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_827630, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000371 DASSVL010000000
VERSION     DASSVL010000371.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2836)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2836)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2836
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_827630"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1405)
                     /locus_tag="VFM52_06530"
     CDS             complement(<1..1405)
                     /locus_tag="VFM52_06530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007512775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HET8764858.1"
                     /translation="MHFLQRMLRHKSVVELQSEAAQRGDFRRVLGLWQLTAIGVGGII
                     GVGIFVLAGQQAALNAGPAVALSFLIAGCGSACAALCYAEFAGLIPVTGSAYTYGYAV
                     LGEFVAWIIGWDLLLEYALVVAVVAIGWSGYVQVLLASAGVHLPEWAQQSMSPQTMHW
                     YLQQMFGVHGAAVAGPSDGHRFNVIAAAVSVGVALLLTMRMEVGARFNTAIVAIKVLG
                     VLLVIGVGAFFIHTVNWHPYIPPRVFDAQGVGHFGWAGVLTGASVVFFAVFGYDTLTT
                     AAEEARHPQRDLPRAVILSLAVAMVLYIAVSLVITGITPYRNLGGDASVSQAFELIGL
                     HWVSVAIAVAAVVGVTSVLFAFMLGAARIWFALARDGLLPEWFARVSPRYGTPARPTL
                     ILGVFTAIVAGLLPIGEVAELVNIGTLSAFIIICSAVLTLRIRKPQLDRGFRAPWLGL
                     VAPLGVAFSLLLIFGLPW"
     gene            complement(1458..2735)
                     /locus_tag="VFM52_06535"
     CDS             complement(1458..2735)
                     /locus_tag="VFM52_06535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017460635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_process: GO:0008610 - lipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sterol desaturase family protein"
                     /protein_id="HET8764859.1"
                     /translation="MNVQQLVITWATPVFFILIGIELLVARWRGRDAYAGNDAVNSLS
                     LGVISQLVAVFTVTLNIGIYAWCARHLALFHLPADSVAVWLGALLAYDFCYYWLHRKG
                     HEMNILWAAHVVHHQSERYNLSTALRQTGTGPLLSWIFYLPLAILGVPVEVFVVVALI
                     DLLYQFWVHTGEIGKLGWFDRVFCSPSNHRAHHAVNDRYLDKNYGGILILWDRLFGTF
                     VEEDAADPPVYGTRAPLRSWNPLWANAEVYWHTAQDAWHARRWRDKLLVWVKPPGWRP
                     AGAAERYPATGFDLHRPRYDPPQALPVKVYVLAQFALLLGMVTQFLALAGSAAGLGGL
                     LGYALYLVAGLSVLGALMENRRWAWWAEGARVLATATLPLASGRWFGVTHLDGRVALA
                     SALVFGVSALALPWLHRLPAPAVAAPARVTAGP"
BASE COUNT          508 a         1034 c          953 g          341 t
ORIGIN      
        1 gccacggcag gccgaagatc aagagcagcg agaaggcgac gccgagcggc gcgaccaggc
       61 cgagccacgg cgcgcggaag ccgcggtcga gctgcggctt gcggatgcgc agcgtgagca
      121 ccgcgctgca gatgatgatg aaggcgctga gcgtgccgat gttgaccagc tcggcgactt
      181 cgccgatcgg cagcagaccg gccacgatcg cggtgaacac gccgaggatc agcgtcggcc
      241 gcgctggcgt gccgtagcgc gggctcaccc tggcgaacca ctcgggcagc aggccgtcgc
      301 gcgccagcgc aaaccagatg cgcgccgcgc cgagcatgaa ggcgaacagc acgctggtga
      361 cgccgaccac cgccgccacc gcgatcgcca cgctcaccca gtgcaagccg atcagctcga
      421 acgcctgcga caccgacgcg tcgccgccga ggttgcggta cggcgtgatg ccggtgatca
      481 ccagcgacac cgcgatgtac agcaccatcg ccaccgccag cgacaggatc acggcgcgcg
      541 gcaggtcgcg ctgcgggtgc ctggcctcct ccgcggccgt ggtcaacgtg tcgtagccga
      601 acaccgcgaa gaacaccacg ctcgcgccgg tgagcacgcc ggcccagccg aaatggccga
      661 cgccctgcgc atcgaacacg cgcggcggga tgtacggatg ccagttcacg gtgtggatga
      721 agaacgcgcc gacgccgatc accagcagca cgccgagcac cttgatcgcg acgatcgcgg
      781 tgttgaagcg cgcaccgacc tccatgcgca tggtgagcag caacgccacg ccgaccgaca
      841 ccgccgccgc gatcacgttg aagcggtggc cgtcgctcgg cccggcgacc gctgcgccgt
      901 gcacgccgaa catctgctgc aggtaccagt gcatggtctg cgggctcatg ctctgctgcg
      961 cccattccgg caggtgcacg ccggccgagg ccagcaacac ctgcacgtag cccgaccagc
     1021 cgatcgccac caccgcgacc accagcgcgt attccagcag caggtcccag ccgatgatcc
     1081 aggcgacgaa ctcgccgagc actgcgtagc cgtaggtgta ggcactgccg gtgaccggga
     1141 tcagcccggc gaattcggcg tagcacaacg cggcgcacgc gctgccgcaa cccgcgatca
     1201 ggaacgacag cgccaccgcc ggccccgcgt tcagcgctgc ctgctggccg gcgagcacga
     1261 agatgccgac gccgatgatg ccgccgacgc cgatcgcggt gagctgccac aaccccagca
     1321 cgcggcggaa gtccccgcgc tgcgcggctt cgctctgcag ctcgacgacc gacttgtggc
     1381 gcagcatcct ctgcaggaag tgcatgggtg gctccccgtt gtacaagcga gcgatcatag
     1441 ccgctcgccc gctgcggtca tgggccagcg gtcacacgcg ccggcgcagc gacggccggc
     1501 gccggaagcc ggtgcagcca cggcagtgcc agggcgctca cgccaaacac cagcgccgac
     1561 gccagcgcga cgcgcccatc caggtgggtc acgccgaacc agcgcccgct ggccagcggc
     1621 aatgttgcgg tggccagcac gcgtgcgcct tcggcccacc acgcccagcg gcggttttcc
     1681 atcagtgccc cgagcacgct cagcccggcc acgagataca gcgcgtagcc gagcaatccg
     1741 cccaggccgg cggcgctgcc cgccagcgcg aggaactggg tcaccatgcc cagcagcagc
     1801 gcgaactgcg ccagcacata caccttgacc ggcagcgcct gcggcgggtc gtagcgcgga
     1861 cggtgcaggt cgaaccccgt cgccggatag cgctcggctg cgccggcggg ccgccagccc
     1921 ggcggcttca cccacaccag cagcttgtcg cgccagcggc gcgcatgcca ggcgtcctgc
     1981 gccgtgtgcc agtacacctc ggcattcgcc cacaacgggt tccagctgcg cagcggcgcg
     2041 cgcgtgccgt acaccggcgg gtcggcggcg tcttcctcca cgaaggtgcc gaacaggcga
     2101 tcccagagga tgaggatgcc gccgtagttc ttgtccaggt agcggtcgtt caccgcatgg
     2161 tgcgcgcggt ggttggacgg cgagcagaac acgcggtcga accagcccag cttgccgatc
     2221 tcgccggtgt gcacccagaa ctggtagagc aggtcgatca gcgccaccac cacgaacacc
     2281 tcgaccggca cgccgaggat cgccagcggc aggtagaaga tccagctcag cagcggcccg
     2341 gtgccggtct ggcgcagcgc agtggagagg ttgtagcgct cgctctggtg gtgcaccacg
     2401 tgcgcggccc acaggatgtt catctcgtgg cccttgcggt gcagccagta gtagcagaag
     2461 tcgtaggcca gcaaggcgcc cagccacacc gccacgctgt cggcaggcag gtggaacagc
     2521 gcgaggtgcc gcgcgcacca ggcgtagatg ccgatgttca gcgtgacggt gaacacggcg
     2581 accaactgcg agatcacgcc gaggctcagg ctgttcacgg cgtcgttgcc ggcataggcg
     2641 tcgcggccgc gccagcgggc caccagcagc tcgatgccga tcaggatgaa gaacaccggc
     2701 gtcgcccagg tgatgaccag ctgctgcacg ttcatcgacc gcccccgtcg cccgcgccct
     2761 gcaccgagcg cgcaatgccc cccaacgccg gatagtacgt cgccaggatc cacagcgggg
     2821 ccagcggcag cggacc
//
LOCUS       DASSVL010000372         2241 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_178187, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000372 DASSVL010000000
VERSION     DASSVL010000372.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2241)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2241)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2241
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_178187"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(29..1246)
                     /gene="gspF"
                     /locus_tag="VFM52_06540"
     CDS             complement(29..1246)
                     /gene="gspF"
                     /locus_tag="VFM52_06540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015449042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015627 - type II protein secretion
                     system complex [Evidence IEA];
                     GO_process: GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system inner membrane protein
                     GspF"
                     /protein_id="HET8764860.1"
                     /translation="MSQFRYKAVSESGELLQGQMEARSVDEVVARLQDQGSTPLEAAP
                     ADAAGGGSSLAALFKRGPFGGDQLAQFTHELATLLGAGQPLDRALGILMDLPESDRAR
                     RLVERVRDRVRGGMPLSQALDEEHGVFPRLYVALVRAGEAGGSLEETLRRLADYLERA
                     QQLRGSLINSLIYPAFLLVGVLGSLLLLLAYVVPQFVPIFEDMQVPIPWITRVVLALG
                     NAVQAGWWLMLLLVVGGAFVLRARLRDPSMRLAWDARLLRVRIAGPLLLKVQTARIAR
                     TLGTLLKNGVPLLTALTIARQVTTNRALDAALAQAGEQVKGGSGLGLALGETRVFPRL
                     ALQMVQVGEEAGELDGMLLKVADTFELESRRSIDRLLAALVPALTVVMTVLVGFIMAA
                     ILLPLLSLTSNIQ"
     gene            complement(1349..>2241)
                     /locus_tag="VFM52_06545"
     CDS             complement(1349..>2241)
                     /locus_tag="VFM52_06545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007512274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATPase, T2SS/T4P/T4SS family"
                     /protein_id="HET8764861.1"
                     /translation="SAHGEDAVIRILDKESISEQFTELRLDILGFPDDELRRFRKYIR
                     EPYGMVLVTGPTGSGKTTTLYTALSRLNTPDVKIITVEDPVEYQIEGINQIQAKPQIG
                     LDFAAALRSIVRQDPDVIMIGEMRDLETCRIAIQSALTGHLVLSTLHTNSAAGGITRL
                     LDMGVEDYLLGSTVNGILAQRLVRRLDPETAQPYTPSPEVIAQFELEKYAGGKPIQLW
                     KPGTSAANPTGYHGRQAIMEFLVMSEPLRRLVMQHADEADIEHAARAEGMRTMYEDGL
                     VKALAGVTTLEEVLRVTQEG"
BASE COUNT          348 a          806 c          736 g          351 t
ORIGIN      
        1 cgtcaaacgt catggctgtc tccacctttc attggatatt gctggtgagg ctcagcagcg
       61 gcagcaggat cgccgccatg atgaaaccca ccagcaccgt catcaccacg gtcaacgcgg
      121 gcaccagcgc ggccagcagg cggtcgatcg agcgccggct ttccagctcg aaggtgtcgg
      181 cgaccttgag cagcatgcca tccagctcgc cggcttcctc gccgacctgc accatctgca
      241 gcgcgaggcg cgggaagacc ctggtttcac caagcgccag gccgagcccg gaaccgccct
      301 tcacctgctc gccggcctgc gccagcgcgg catcgagtgc gcggttggtg gtgacctggc
      361 gcgcaatggt cagcgcggtc agcaacggca cgccgttctt cagcagcgtg ccgagcgtgc
      421 gcgcgatgcg cgcggtctgc accttgagca gcagcgggcc ggcgatgcgc acgcgcagca
      481 ggcgtgcatc ccacgccagc cgcatcgacg gatcgcgcaa tcgcgcgcgc agcacgaacg
      541 cgccgccgac gaccagcagc agcatcagcc accacccggc ctgcacggca ttgccgagtg
      601 ccagcaccac gcgcgtgatc cacgggatcg gcacctgcat gtcctcgaag atcggcacga
      661 actgcggcac cacgtaggcg agcagcaaga gcagcgagcc gagcacgccg accagcagga
      721 acgccggata gatcagcgaa ttgatcaggc tgccgcgcaa ctgctgcgcg cgctcgaggt
      781 aatccgcgag ccggcgcagg gtttcctcca gcgagccacc ggcttcgccg gcgcgcacca
      841 gcgcgacgta cagcctggga aacacgccgt gttcctcgtc gagcgcctgc gacagcggca
      901 tgccgccgcg cacgcggtcg cgcacgcgct cgaccagcct gcgggcacgg tcgctctccg
      961 gcaggtccat caggatgccg agcgcgcgat ccagcggctg gccggccccc agcagcgtcg
     1021 ccagttcatg cgtgaactgc gcgagctggt cgccgccgaa cggcccgcgc ttgaacagcg
     1081 ccgcgaggct cgatccgcca cccgcggcat cggcgggtgc ggcttcgagc ggtgtgctgc
     1141 cctggtcctg caggcgcgcc accacttcat ccacgctgcg ggcttccatc tgaccctgca
     1201 gcaattcccc ggattcgctg accgccttgt agcggaactg gctcatgaac gccgcccttt
     1261 gcgggcgccc aggtcgtgcc ctcgcaagtg cgccccctcg ccccgaccct ccgcaggagt
     1321 cgttccctgc agcgggcggg aacaggcctc agccttcctg cgtgacacgc agcacctcct
     1381 ccagcgtggt cacgccggcg agcgccttga ccaggccgtc ctcgtacatc gtgcgcatgc
     1441 cctcggcgcg cgcggcgtgc tcgatgtcgg cctcgtcggc gtgctgcatc accagccggc
     1501 gcagcggctc gctcatcacc aggaactcca tgatcgcctg gcggccgtga tagccggtcg
     1561 ggttggccgc gctggtgccc ggcttccaca gctggatcgg cttgccaccc gcgtatttct
     1621 ccagctcgaa ctgcgcgatc acctcgggcg acggcgtgta cggctgcgcg gtttccgggt
     1681 cgagccggcg caccaggcgc tgggcaagga tgccgttcac cgtggagccc agcaggtaat
     1741 cctccacgcc catgtcgagc aggcgggtga tgccgccggc cgcgctgttg gtgtgcagcg
     1801 tggagagcac caggtggccg gtgagtgcgg actggatcgc gatgcggcag gtctccaggt
     1861 cgcgcatctc gccgatcatg atcacgtccg gatcctggcg cacgatcgag cgcagcgcgg
     1921 cggcgaaatc cagcccgatc tgcggcttgg cctggatctg gttgatgccc tcgatctggt
     1981 attcgaccgg atcctcgacc gtgatgatct tcacgtccgg cgtgttgagc ctggacagcg
     2041 ccgtgtacag cgtcgtcgtc ttgcccgagc cggtcggccc cgtgacgagc accatgccgt
     2101 acggctcgcg gatgtacttg cggaaccgcc gcagctcgtc gtcgggaaaa ccgaggatgt
     2161 cgagccgcag ctcggtgaac tgctcgctga tcgattcctt gtcgaggatg cggatgaccg
     2221 cgtcctcgcc gtgcgcgctc g
//
LOCUS       DASSVL010000373         4674 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1322580,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000373 DASSVL010000000
VERSION     DASSVL010000373.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 4674)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4674)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4674
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1322580"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(3..128)
                     /gene="ykgO"
                     /locus_tag="VFM52_06550"
     CDS             complement(3..128)
                     /gene="ykgO"
                     /locus_tag="VFM52_06550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011098120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type B 50S ribosomal protein L36"
                     /protein_id="HET8764862.1"
                     /translation="MKVLNSLKSAKARHRDCKIVRRRGKVFVICKSNPRFKARQR"
     gene            299..982
                     /gene="cmk"
                     /locus_tag="VFM52_06555"
     CDS             299..982
                     /gene="cmk"
                     /locus_tag="VFM52_06555"
                     /EC_number="2.7.4.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007080708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004127 - cytidylate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0015949 - nucleobase-containing small
                     molecule interconversion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(d)CMP kinase"
                     /protein_id="HET8764863.1"
                     /translation="MNRIATIPVLTIDGPSGSGKGTVSRCVADRLGWRLLDSGALYRA
                     VGYAAGAAGLDLSDAEAVTRCAEATKIRFQASADGGDTRILVNGHDATDELRTETAGA
                     AASAIASMAPVRQALVDMQLGFRKAPGLVADGRDMGTVIFPDAPFKVFLTASAAERAK
                     RRYKQLKAKGLNVTLATLQREIEARDHRDATRAVAPLKPAPEAVLVDTTGMSIDQVVA
                     RVLAVVQPQ"
     gene            1150..2823
                     /gene="rpsA"
                     /locus_tag="VFM52_06560"
     CDS             1150..2823
                     /gene="rpsA"
                     /locus_tag="VFM52_06560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019183099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S1"
                     /protein_id="HET8764864.1"
                     /translation="MTESFAELFEQSQQAIAKLKPGAIVSGIVVEIRNDVVVINAGLK
                     SEGIVPIEQFKDESGAIEVHVGDEVKVALEALEDGFGETKLSREKAKRSMVWDDLEAA
                     FDKEETVKGMISGKVKGGFTVDIHDVRAFLPGSLVDVPPVREPTYLEGKELEFKIITL
                     DRKRNNVVVSRRAVVETEFSAERELLLERLVEGAVIKGVVKNLTDYGAFVDLGGIDGL
                     LHITDMAWKRVRHPSEVVNVGDELEVRVLKFDRERNRVSLGLKQLGDDPWVNISRRYP
                     VGSRLFGKVSNVTDYGCFVEIEPGVEGLVHVSEMDWTNKNVNPSKIVQVGDDVEVMVL
                     DVDEDRRRISLGIKQTRSNPWEAFAAMHKKGDKVSGQIKSITDFGVFIGLEGGIDGLV
                     HLSDISWQTSSEDLVRNFKKGDEIEAVVLAVDPERERISLGIKQMEQDPFGQYMGNHP
                     RGTVVTGTVKEVDAKGAVIDLGDGVEGYVRANDIAKERVDDATQYLKVGDSVEAKFTG
                     MDRKGRQLALSIRAKDEADVQEAMAEYSSTGGGTTKLGALLKEQLNKAE"
     gene            2873..3208
                     /locus_tag="VFM52_06565"
     CDS             2873..3208
                     /locus_tag="VFM52_06565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014402796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005694 - chromosome [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="integration host factor subunit beta"
                     /protein_id="HET8764865.1"
                     /translation="MAGSNVADQGTMTKSELIEALARRQTHLAFADVELAVKSIIEQM
                     SQALADGERIEVRGFGSFALHFRPPRMGRNPKTGESVALPGKHVPHFKPGKELRERVN
                     QRLEEAATH"
     gene            3301..3543
                     /locus_tag="VFM52_06570"
     CDS             3301..3543
                     /locus_tag="VFM52_06570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019466990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide assembly protein LapA
                     domain-containing protein"
                     /protein_id="HET8764866.1"
                     /translation="MRLTVILLLGFFVAAGIVVGALNADLVGYDFAFARVQLPKGAAL
                     LAALVLGWFLGGLTAWLGVGMRRRRQRTRTRKEAGK"
     gene            3553..>4674
                     /gene="lapB"
                     /locus_tag="VFM52_06575"
     CDS             3553..>4674
                     /gene="lapB"
                     /locus_tag="VFM52_06575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019466991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide assembly protein LapB"
                     /protein_id="HET8764867.1"
                     /translation="MFPWYVIPAAFGAFAAGWWLARWLSARRSGAAVNELSSDYFRGL
                     NYLLNEEQDKAIEVFLRLAEYNRDTVETHLALGNLFRRRGEVDRAIRLHQHLVSRPGL
                     SEPMKTVALLELGEDYMRAGLLDRAEALFCDLVALDAHAPSALRHLISIYQHERDWHK
                     AIEHARRLEAMTGEDQAPIIAQFYCELAERSRQHGAKVEAREYLDQAFACQRDCVRAW
                     MLTGRIEADAGHPDKAVDAYEAAVDADVAFVPEILPPLLESYARSRQTDRAEQFLRGL
                     LERYHGVSPVLALTRLYRERDGKRVAVDFLTSQLRRRPSVRGLMALIDATMDSIQGEA
                     RDNFLILRDLTKKLLEGQAMYRCSRCGFGAKAHHWQCPSC"
BASE COUNT          808 a         1496 c         1611 g          759 t
ORIGIN      
        1 gatcagcgct gacgggcctt gaaacgcggg ttgctcttgc agatcacgaa caccttgccg
       61 cgacgacgca cgatcttgca gtcgcggtgc cgcgccttgg cggacttcaa cgagttaagc
      121 accttcacgg ccagctcctg atgcagacga aaaacgtagc gcgctactgt agccgatatg
      181 ttggcgtatc acaagttgcc ggactcgttc aaggcgcgtg ccggcgcgcc cggcaaggat
      241 cgtcctgggc gcgcgggcgc cgcgatacca tgcgggtttt cgcgccgccg agtccgccat
      301 gaaccgcatc gccaccatcc ccgtgctgac catcgacggc ccgtccggct cgggcaaggg
      361 cacggtgagc cggtgcgtgg ccgaccgcct gggctggcgg ctgctggact ccggcgcgct
      421 gtaccgagcg gtcggctacg ccgcgggcgc cgccgggctg gatctctccg acgccgaggc
      481 ggtcacccgc tgtgccgaag ccacgaagat ccgcttccag gccagcgccg acggcggcga
      541 cacccggatt ctcgtcaatg gccacgacgc caccgacgag ttgcgcacgg aaaccgcggg
      601 tgcggcggcg tcggccatcg cgtcgatggc gccggtacgc caggcgctgg tggacatgca
      661 gctcggcttc cgcaaggcgc ctgggctggt ggccgacggg cgcgacatgg gcacggtgat
      721 ctttcccgat gcgccgttca aggtattcct caccgccagc gccgccgagc gtgcgaaaag
      781 gcgctataag cagttgaaag caaaggggct caacgttaca cttgccaccc ttcaacgcga
      841 gatcgaagcg cgtgaccatc gcgatgcgac acgtgcggtg gcgcctctca agcccgcgcc
      901 ggaagccgtg ctggtggaca ccaccggcat gagcatcgat caagtcgttg cacgcgttct
      961 cgccgtcgtg cagccgcaat agcggttgcc tggcggtttt ccctcctcgg ccagggcggc
     1021 cggggttcaa tcatggtgac aaggggcgcc ccgccaacgg gctcccggcg gcacccttac
     1081 cggtggaccg ctgtcggtgc aggttctgga tcgcgcatcg cggccgtcct ttttcattct
     1141 ggaatcaaca tgaccgaaag ttttgccgaa ctgtttgaac agagccagca ggccatcgcc
     1201 aagctcaagc ccggcgccat cgtctccggc atcgtggtgg aaatccgcaa tgacgtcgtc
     1261 gtcatcaacg cgggcctgaa gagcgaaggc atcgtcccga tcgagcagtt caaggacgag
     1321 agtggcgcga tcgaagtgca cgtgggcgac gaggtgaagg ttgccctcga agcgctcgaa
     1381 gacgggttcg gcgaaaccaa gctgtcgcgc gagaaggcca agcgctcgat ggtgtgggac
     1441 gacctcgagg cggcgttcga caaggaagag accgtcaagg gcatgatctc gggcaaggtc
     1501 aagggcggct tcaccgtgga catccacgat gtgcgcgcct tcctgccggg ttccctggtc
     1561 gacgtgcccc cggtgcgcga gccgacctac ctcgagggca aggaactcga gttcaagatc
     1621 atcacgctcg accgcaagcg caacaacgtg gtggtcagcc gccgcgccgt cgtcgagacc
     1681 gagttctccg ccgagcgcga gctgctgctg gagcgcctgg tcgagggcgc cgtgatcaag
     1741 ggcgtggtga agaacctcac cgattacggc gcgttcgtgg acctgggtgg catcgacggc
     1801 ctgctgcaca tcaccgacat ggcgtggaag cgcgtgcgcc atccgtccga ggtggtcaac
     1861 gtcggcgacg agctggaagt gcgcgtgctg aagttcgacc gcgagcgcaa ccgcgtctcg
     1921 ctgggcctga agcagctcgg cgacgatccg tgggtgaaca tctcgcgtcg ctacccggtg
     1981 ggctcgcgcc tgttcggcaa ggtctccaac gtcaccgact acggctgctt cgtcgagatc
     2041 gagccgggcg tcgagggcct ggtgcacgtg tccgagatgg actggaccaa caagaacgtc
     2101 aacccgtcca agatcgtgca ggtcggtgac gacgtcgaag tgatggtgct ggacgtcgat
     2161 gaagaccgtc gccgcatctc gctgggcatc aagcagacgc gttccaaccc gtgggaagcc
     2221 ttcgccgcca tgcacaagaa gggcgacaag gtctccggcc agatcaagtc gatcaccgac
     2281 ttcggcgtgt tcatcggcct ggaaggcggc atcgatggcc tggtgcacct gtccgacatc
     2341 tcctggcaga catccagcga agacctcgtg cgcaacttca agaagggcga cgagatcgag
     2401 gcggtggtgc tggcggtgga tccggagcgt gagcgcatct cgcttggcat caagcagatg
     2461 gagcaggacc cgttcggcca gtacatgggc aaccatccgc gcggcacggt cgtcaccggc
     2521 acggtcaagg aagtggacgc gaagggcgcc gtgatcgacc tcggcgatgg cgtcgagggc
     2581 tatgtgcgcg ccaacgacat cgcgaaggag cgcgtcgacg acgccaccca gtatctcaag
     2641 gtgggggatt ccgtcgaagc caagttcacc ggcatggatc gcaagggacg ccagctggcg
     2701 ctgtcgatcc gtgccaagga cgaggcggac gtgcaggaag ccatggccga atactcctcg
     2761 accggcggcg gcaccaccaa gctgggtgcg ctgctcaagg agcagttgaa caaggccgag
     2821 taaggcatcg tgggttcggc gcggggcggg ttgtgccgcc tcgcgccgca cgatggcggg
     2881 atcgaacgtc gcggaccagg ggaccatgac caaatccgaa ttgatcgagg cgctggcacg
     2941 gcgccagacc caccttgcgt ttgccgacgt cgagcttgcg gtcaagagca tcatcgagca
     3001 gatgagccag gcgttggccg atggcgagcg catcgaggtg cgcggcttcg gcagctttgc
     3061 gttgcacttt cgcccgcctc gcatggggcg caaccccaag accggcgaat cggtggcgct
     3121 gccgggcaag cacgtgccgc atttcaagcc gggcaaggag ctgcgcgagc gcgtcaatca
     3181 acggctggaa gaagccgcga cgcactgagt cgcgccggga agcgaggata ggaggcaggc
     3241 ggcgcgagcc ggcctgcctt ttgtgttttt gtgcggcaag cgatcgggta aagtccacgc
     3301 atgcgattga ccgtcattct tctgctcggg ttcttcgtcg ccgccggcat cgtggtcggc
     3361 gcgctcaacg ccgacctggt cggctacgac ttcgcgtttg cccgcgtgca gttgccgaag
     3421 ggcgccgcgc tgctcgcggc actggtgctc ggctggtttc tcggcggcct gaccgcgtgg
     3481 ctcggcgtgg gcatgcgccg gcgtcgccag cgcacgcgca cgcgcaagga ggccggcaag
     3541 taagccggcg ccatgtttcc ctggtacgtg attcccgcgg ctttcggcgc gtttgcggcc
     3601 ggctggtggc tggcgcgctg gctgtcggcg cggcgctccg gggccgccgt caacgagctg
     3661 tcgtcggact atttccgcgg cctcaattac ctcctgaacg aggagcagga caaggccatc
     3721 gaggtgttcc tgcgcctcgc cgagtacaac cgcgacacgg tcgagaccca cctggcgctg
     3781 ggcaacctgt tccgtcggcg cggcgaggtc gatcgcgcga tccgcctgca ccagcacctg
     3841 gtgtcgcggc cgggcctgtc cgaaccgatg aagaccgtgg cgctgctgga actgggcgag
     3901 gactacatgc gcgccggcct gctcgatcgc gccgaggcct tgttctgcga cctggtcgca
     3961 ctggacgcgc acgcgccctc ggccttgcgc catctgatct cgatctacca gcacgaacgc
     4021 gactggcaca aggcgatcga gcacgcgcgg cggctcgagg cgatgaccgg cgaggatcag
     4081 gcgccgatca tcgcccagtt ctactgcgag ctggccgaac gctcgcgcca gcacggcgcc
     4141 aaggtggaag cccgcgaata cctcgaccag gcgtttgcct gccagcgcga ctgcgtgcgc
     4201 gcctggatgc tgaccggccg catcgaagcc gacgcggggc accccgacaa ggcggtggac
     4261 gcctatgagg cggcggtgga cgccgatgtg gcgttcgtgc cggagatcct gccgcccttg
     4321 ctggaaagct acgcgcgatc gcggcagacc gatcgtgccg agcagttcct gcgtggactg
     4381 ctggagcgct accacggggt gtcgccggtg ctggccctga cccggctgta ccgtgaacgc
     4441 gatggcaagc gtgtcgcggt cgatttcctc acttcgcagt tgcggcgccg gccgtcggtg
     4501 cgcggcttga tggcgctgat cgacgccacg atggacagca tccagggcga ggcgcgcgac
     4561 aacttcctca tcctgcgcga cctgacaaag aagctgctgg aagggcaggc gatgtatcgc
     4621 tgcagccgct gcggcttcgg cgccaaggcg catcactggc agtgccccag ctgc
//
LOCUS       DASSVL010000374         2213 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1223184,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000374 DASSVL010000000
VERSION     DASSVL010000374.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2213)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2213)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2213
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1223184"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(15..479)
                     /locus_tag="VFM52_06580"
     CDS             complement(15..479)
                     /locus_tag="VFM52_06580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019237451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SET domain-containing protein-lysine
                     N-methyltransferase"
                     /protein_id="HET8764868.1"
                     /translation="MTRRLSVRRSPIHGNGVYAVVGLPAHTALIQYKGRLLTHAQADR
                     LYDGGADTGHTFLFTLNDKYVVDANVDGNSARWINHSCAPNCRAYIEEVDGARRDKVM
                     IESIRAIEAGEELTYDYGIVLDVPHTAKLKRIWACRCGAKRCTGTLLQPKRG"
     gene            547..906
                     /locus_tag="VFM52_06585"
     CDS             547..906
                     /locus_tag="VFM52_06585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008215357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF488 family protein"
                     /protein_id="HET8764869.1"
                     /translation="MAFKTKRANEPLTKADGARILIDRLWPRGQSKDKLQLTAWVKDI
                     APSTELRKWFNHDPPKFEEFRKRYRAELDANPAAVAELQALLKEHSNATLLYMAHDEQ
                     HCNAVVLSEHLHQHGSK"
     gene            914..1450
                     /locus_tag="VFM52_06590"
     CDS             914..1450
                     /locus_tag="VFM52_06590"
                     /inference="COORDINATES: protein motif:HMM:TIGR00481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbhB/YbcL family Raf kinase inhibitor-like
                     protein"
                     /protein_id="HET8764870.1"
                     /translation="MRRVIAALALAAFTAAAVAAPPFALTSPTFAANARMPMANVYGE
                     CGGGNLSPPLAWRDAPAGTRSFAVTLYDTSVPGGFWHWIAFDIAVGAHGLNAGAGTPH
                     SGNAPGDTVQLRNDFGNAGYSGPCPPPGAPHAYVITVYALDVPELGLMTHFNRKAALA
                     AIHQHALAQATLTVTWGR"
     gene            complement(1434..2069)
                     /locus_tag="VFM52_06595"
     CDS             complement(1434..2069)
                     /locus_tag="VFM52_06595"
                     /inference="COORDINATES: protein motif:HMM:NF013718.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HET8764871.1"
                     /translation="MPWWPLLVACVLIVLGFAGLLLAPVHVLDGRVLLALRDPVDPAQ
                     MLGPRWLQDMLRDFVGLGGIGVLVLFIAGGLGLLWLAGRRRDAGWLLGGVIGAFVVAS
                     VLKHVIARPRPELVPHAAYTFTASFPSGNTLMATVVWLLLAFALADASGRRAIRNLGV
                     LGALAIALLVGVGRVGMGVHWPSDVIEAWGLGMAWVWLLRWLQARRVSVPR"
BASE COUNT          411 a          787 c          719 g          296 t
ORIGIN      
        1 gatcgtcgtc gaaactaacc acgcttcggc tgcagcaagg ttccggtgca ccgcttcgcg
       61 ccgcagcggc aggcccagat gcgcttcagc ttcgcggtgt gcggcacgtc cagcacgatg
      121 ccgtagtcgt aggtgagttc ctcgccggcc tcgatcgcgc ggatggattc gatcatcacc
      181 ttgtcgcggc gcgcgccatc gacttcctcg atgtaggcac ggcagttcgg cgcgcaggaa
      241 tggttgatcc agcgcgcgct gttgccatcg acgttggcat cgacgacgta cttgtcgttg
      301 agcgtgaaca ggaaagtgtg gccggtgtcg gcgccaccgt cgtacaggcg gtcggcctgc
      361 gcgtgggtca aaaggcgccc cttgtactgg atcaacgccg tgtgcgcggg caggccgacg
      421 acggcgtaca cgccgttgcc gtggatgggc gagcggcgca cgctcaagcg acgggtcatg
      481 gaaaaccttg tgcaggcaaa cgcgtatgat gctgtgacat gcagccatca cacaacggag
      541 gttgccatgg cattcaagac caaacgcgcg aacgagccgc tgaccaaggc cgacggcgcg
      601 cgcattctca tcgaccgcct gtggccgcgc ggccagtcca aggacaagtt gcagttgacg
      661 gcgtgggtga aggacatcgc gccctcgacc gaactgcgca agtggttcaa ccacgacccg
      721 cccaagttcg aggaattccg caagcgctat cgcgcagagc tggacgccaa cccggcggcg
      781 gtggccgaac tgcaggcgct gctgaaagag cattccaacg cgacgctgct gtacatggcg
      841 cacgacgagc agcactgcaa cgcggtggtg ttgtcggaac acctgcacca gcacggttcg
      901 aagtagcgcc gccgtgcgcc gcgtgatcgc cgcgctcgca ctggccgcct tcactgcggc
      961 ggcggtggcc gcgccgccct tcgcgctgac cagcccgacc ttcgcagcga atgcacgcat
     1021 gccgatggcg aacgtgtacg gcgagtgcgg cggcggcaac ctgtcgccac cactcgcatg
     1081 gcgcgacgca cccgcgggta cgcgcagctt tgccgtcacc ctgtacgaca ccagcgtgcc
     1141 gggcggcttc tggcactgga tcgcgttcga catcgcggtc ggcgcacacg gcttgaacgc
     1201 cggcgccggc acgccgcaca gcggcaacgc gcccggcgac accgtgcaac tcaggaacga
     1261 tttcggcaac gccggctact ccggcccctg cccgccgccc ggcgcgccac acgcttacgt
     1321 catcacggtg tacgcgctgg acgtgcccga acttggcctg atgacgcact tcaatcgcaa
     1381 ggccgcgctg gcggcgatcc accagcacgc cttggcgcag gcgacactga cggtcacctg
     1441 gggacgctga cgcgccgcgc ctgcagccag cgcagcagcc acacccaggc catgcccagg
     1501 ccccacgcct cgatcacgtc gctgggccaa tgcacgccca tgccaacccg gccgacgccc
     1561 accagcagcg cgatcgccag cgcgcccagc acgcccaggt tgcggatcgc gcgccggccc
     1621 gacgcatcgg caagcgcgaa tgccagcaac agccagacca ccgttgccat cagcgtgttg
     1681 ccgctcggaa aactcgcggt gaaggtgtac gccgcgtgtg gcaccagttc ggggcgcggg
     1741 cgcgcgatca catgcttcaa caccgaagcg acgacgaacg caccgatcac gccgcccagc
     1801 agccagcccg cgtcgcggcg gcgcccggcc agccacagca ggcccagccc gccggcgatg
     1861 aacagcacca gcacgccgat gccgcccagg ccaacgaagt cgcgcagcat gtcctgcaac
     1921 cagcgcggcc ccagcatctg ggcgggatcg accggatcgc gcagcgccag caggacgcgc
     1981 ccatccagca catgcaccgg cgccagcagc agtccggcaa acccgagcac gatcagcacg
     2041 caggcgacca gcaacggcca ccacggcatg cggcaacgcc ggccaatatt cgcaacgggg
     2101 tctggcatcg acatggcttg aatgaccact gagtgggggc gcaggcagtg tagcgatgcg
     2161 gcgaatccgg cggatcgccg ggcaggcatc ggcaaccggc atggtggcac tcg
//
LOCUS       DASSVL010000375         2226 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1280080,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000375 DASSVL010000000
VERSION     DASSVL010000375.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2226)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2226)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2226
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1280080"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1386
                     /locus_tag="VFM52_06600"
     CDS             <1..1386
                     /locus_tag="VFM52_06600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008434738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004177 - aminopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0070006 - metalloaminopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase family protein P"
                     /protein_id="HET8764872.1"
                     /translation="RTDLDLPGLVWADRPALPAQPVFALDLAHACTPRADKLERLRKV
                     MRANGVTHHLVSSLDDIAWLTNLRGSDVDCNPVFLAHLLVAADGSGTLFAERGKFDAA
                     LLAALAADGITVAGYAEVTGAIARLGAGSTLLYDPAHVVCTVSSAIPAQAKRVEAANP
                     STAFKAVKSAAELDHVREVMRRDGAALAHAFREIEARLAAGEPLTELDVDRIVRAARA
                     AQPEFVSESFETIAGYQANGAMPHYRATPELHTALQAKGLLLIDSGGQYLGGTTDITR
                     VLALGEVTAEQRRDATLVLKGMINLSRARFPQGASGPQLDALARAPLWASGSNYGHGT
                     GHGVGYFLNVHEGPQSIRPPVHGDPLVPLEAGMITSIEPGLYKPGRHGIRHENLAAVV
                     EADHTEFGDFLAFETLTMCPFDRRILEPALLSPDERAWLDDYHATVRAALAPLLTGAD
                     LAWLEWHCAPL"
     gene            1417..>2226
                     /locus_tag="VFM52_06605"
     CDS             1417..>2226
                     /locus_tag="VFM52_06605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005416021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HET8764873.1"
                     /translation="MSSRYNAADIEVLSGLDPVKRRPGMYTDTTRPNHMVQEVVDNSV
                     DEALAGYAKTIEVVLHTDGSAEVSDDGRGMPVDIHPEEGIPGVELILTRLHAGGKFSG
                     KNYNFSGGLHGVGVSVVNALSQRLEVTIQRDGNEYRMAFENGDRASDLEIIGSAPKRR
                     TGTTVRCWADPKYFDSPKISLGKLKHLLRAKAVLCAGLTVKLTDEASGEHEEWFYEDG
                     LKDYLRGELDGNEAIPADLFVHHVARDTEGMDVALAWLPEGELVQESYVNLI"
BASE COUNT          381 a          805 c          727 g          313 t
ORIGIN      
        1 cgcaccgatc tcgacctgcc cggcctggtg tgggcggatc gcccggcgct gccggcgcag
       61 ccggtgttcg ccctcgatct cgcccacgcc tgtacgccgc gcgcggacaa gctggagcgc
      121 ctgcgcaagg tgatgcgtgc caatggcgtc acccaccacc tggtttccag cctcgacgac
      181 atcgcctggc tcaccaacct gcgcggcagt gacgtcgact gcaacccggt gttcctcgcc
      241 cacctgctgg tcgccgctga cggcagcggc accttgtttg ccgagcgggg caagttcgat
      301 gccgccctgc tcgccgcgct ggcggccgat ggcatcaccg tggccgggta tgccgaggtg
      361 acgggcgcca tcgcccggct tggcgccgga tccaccctgc tgtacgaccc ggcccacgtg
      421 gtgtgcacgg tgagcagcgc gattcccgcc caggccaagc gggtcgaagc cgcaaacccg
      481 agcaccgcct tcaaggcggt gaagagtgcc gcggaactcg accatgtgcg cgaggtgatg
      541 cgccgcgacg gcgccgcgct ggcgcatgcg ttccgcgaga tcgaggcccg gcttgcggct
      601 ggcgagccgc tcaccgagct ggacgtggac cgcatcgtgc gggcggcgcg cgcggcgcag
      661 cccgagttcg tgagcgaaag cttcgagacc attgccggct accaggccaa cggcgccatg
      721 ccgcactacc gcgccacgcc ggaactgcac accgccttgc aggccaaggg cctgctgctg
      781 atcgactccg gcggccagta tctcggcggt accaccgaca tcacccgcgt gctggcgctg
      841 ggcgaggtca cggccgagca gcgccgcgat gcgacgctgg tgctcaaggg catgatcaac
      901 ctgagccgcg cccggttccc gcagggggcc agcggtccgc agctggatgc gctggcccgc
      961 gccccgctgt gggccagcgg cagcaactac ggccacggca ccggccacgg cgtggggtat
     1021 ttcctcaacg tgcacgaagg cccgcagtcg atccggccgc cggtgcacgg cgacccgctg
     1081 gtgccgctcg aagccggcat gatcacctcg atcgagccgg gcctgtacaa gcccggccgg
     1141 cacggtatcc ggcacgagaa cctcgccgcc gtggtcgagg ccgaccacac cgagttcggc
     1201 gatttcctcg ccttcgagac gctgacgatg tgcccgttcg accgacgcat cctcgaaccc
     1261 gcattgctca gccccgacga gcgcgcctgg ctcgacgact accacgccac ggtgcgcgcc
     1321 gcgctcgcgc cgctgctgac cggcgccgac ctcgcctggc tcgaatggca ttgcgcaccg
     1381 ctgtaatccc cacctttctg gaatcgaaca tcaagcatga gcagccgcta caacgccgcc
     1441 gacattgaag tcctctccgg cctcgacccg gtcaagcgcc ggccgggcat gtacaccgac
     1501 accacccgcc ccaaccacat ggtgcaggag gtggtcgaca actcggtcga cgaagcgttg
     1561 gccggctacg caaagacgat cgaggtcgtg ctgcacaccg acggctcggc cgaggtcagc
     1621 gacgacggcc gcggcatgcc ggtggacatc catcccgagg aaggcatccc cggcgtcgaa
     1681 ctgatcctca cccggctgca tgcgggcggc aagttcagcg gcaagaacta caacttctcc
     1741 ggcggcctgc acggcgtcgg cgtatccgtg gtgaacgcgc tgtcgcagcg gctggaggtg
     1801 accatccagc gcgacggcaa cgaataccgc atggcattcg agaacggcga ccgcgcgagc
     1861 gacctggaaa tcatcggcag cgcaccgaag cgcaggaccg gcaccaccgt gcgctgctgg
     1921 gccgacccga aatacttcga ctcaccgaag atctcgctcg gcaaactcaa gcacctgctg
     1981 cgcgcgaagg ccgtgctgtg cgccggcctc accgtgaagc tcaccgacga ggccagcggc
     2041 gaacacgagg aatggttcta cgaggacggc ctcaaggatt acctgcgtgg cgagctggac
     2101 ggcaatgaag ccattcccgc cgacctcttc gtgcaccacg tcgcgcgcga cactgaaggc
     2161 atggacgtcg cgctcgcatg gctgccggaa ggcgagctgg tgcaagagag ctacgtcaac
     2221 ctgatc
//
LOCUS       DASSVL010000376         4217 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_629944, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000376 DASSVL010000000
VERSION     DASSVL010000376.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 4217)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4217)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4217
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_629944"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(152..2068)
                     /locus_tag="VFM52_06610"
     CDS             complement(152..2068)
                     /locus_tag="VFM52_06610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004572898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium transporter Kup"
                     /protein_id="HET8764874.1"
                     /translation="MTTSSATAPEASGNHATLANLPLRTLTVGAVGVVFGDLGTSPLY
                     TLQEVFGNTRGLGVNHATVLGVLSLVLWSLIVVVCIKYVLFVMRADNKGEGGIVALLA
                     LAQRSVRNAPTLRWLVAIIAVFGAALFYGDGVITPAISVLSAVEGIKVAAPELEAWIM
                     PGSAVILLALFLLQRVGTARVGKLFAPVMLVWFVVIALLGVRMIVRDPSILAAANPYY
                     ALRFFATHGLVGFVALGGVVLALTGTEALYADIGHFGKRPIRVAWSLIVFPALLLNYF
                     GQGALLLQAPTDSRNPFYLMVPQPLLVPMIALAAMATIIASQAVISGAYSMTIQAMQL
                     GYSPRMRVVHTSDQVAGQVFVPWINTMLLVLVLAAVLGFRSSENLGAAYGIAVTGTMV
                     TTTLLALLVALRQWRWKWYAVAALGLPLLTIDFAFFGANLLKVESGGWFPLALGGLVF
                     IVMTTWRRGRELVLRQLKMGGLALAPFIESLGTHPPLRVPGTAVFLTANPGAVPHALL
                     HSLKHFKVLHERNVLLSVETLETPYADADERIELTALGHDFHRLLLRFGFAEAPNIPA
                     ALSACALQGMRFDLMDTTFFLSRENIVASRHPGMALWRDKLFAFLARNAMPATAFFHI
                     PGNRLVELGTQVEI"
     gene            2272..2637
                     /locus_tag="VFM52_06615"
     CDS             2272..2637
                     /locus_tag="VFM52_06615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008213025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PadR family transcriptional regulator"
                     /protein_id="HET8764875.1"
                     /translation="MDDVADQLKKFRKELSAGTVSLVLLAVLGQSCQPMYGYQIAKRL
                     EQVGEGVLAGKQSALYPVLRNLEGAGLLVSDVEPSVSGPPRRYYHITQSGREVLRAWI
                     AAWNASRDSVDQVLRGELQ"
     gene            2634..3566
                     /locus_tag="VFM52_06620"
     CDS             2634..3566
                     /locus_tag="VFM52_06620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010344057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor domain-containing protein"
                     /protein_id="HET8764876.1"
                     /translation="MNPSPTPPRTIAEYLERLRAALQGADPALIQDALYDAEEHLRAE
                     LYERPGRDEAAMLEQVVQSYGAPDEVAEIYRDQEIRIQRAIRPPPPPRRRSASGRFFG
                     VIADPRAWGALLYLLFGLVTGIAYFTWVVAGVAMSMGLSVLIIGLPFIVLFFGSVRSF
                     ALLEGRLVETMLGVRMPRRPPYPVAHLPIWKRIGAMFTDPRSWSSMLYGLLQLPLGIF
                     YFTLIVTWRAVALGFIAAPALKLVAMLGHWDTGTCTGQPAWLCDGIEWWSGWAGATVL
                     CVFGLLLFFSLLHVARGLGHLHGQLAKQLLVRRS"
     gene            complement(3657..>4217)
                     /locus_tag="VFM52_06625"
     CDS             complement(3657..>4217)
                     /locus_tag="VFM52_06625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013535967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translational GTPase TypA"
                     /protein_id="HET8764877.1"
                     /translation="ALGERRADLVNMEPDGMGRVRLDYKIPARGLIGFQNQFKTLTQG
                     SGLLFHVFDHYGPKEEGQIAKRQNGVMISNGTGPCPAYALNMLQDRGRLLAGEGDEVY
                     EGQLVGIHAKDNDLTVNCLRGKQLTNMRAAGKDEGIQLTPPVRMSLEQALDFIEDDEL
                     VEVTPKAIRLRKKWLTEIDRRRAHRG"
BASE COUNT          677 a         1407 c         1450 g          683 t
ORIGIN      
        1 cgactacgtg gcgcgccccg cggcgtggta cctgcgcgaa ttcgggcgcg tcggcctcgt
       61 gccctgcggt tcgcactgct acgtgggcgc cgcgctggcc acgcgcgcca cggcgctgga
      121 actcgccgga cgcacgccgc gccggtagcc gtcagatctc gacctgggtg ccgagctcga
      181 ccagccggtt gccggggatg tggaagaacg ccgtcgccgg catcgcgttg cgcgcgagga
      241 acgcgaacag cttgtcgcgc cacagcgcca tgcccgggtg ccggctggcg acgatgttct
      301 cgcgcgacag gaagaacgtg gtgtccatca ggtcgaagcg catcccctgc agggcgcagg
      361 cggacagcgc ggccgggatg ttcggcgcct cggcgaagcc gaagcgcagc agcaggcgat
      421 ggaaatcgtg tccgagcgcg gtcagctcga tccgctcgtc ggcatccgca tacggcgttt
      481 cgagggtttc cacgctgagc agcacgttgc gctcgtgcag caccttgaag tgcttgaggc
      541 tgtgcagcag cgcgtgcggc acggcgcccg ggttcgcggt caggaacacc gccgtgcccg
      601 gtacccgcag cggcgggtgc gtgccgaggc tctcgatgaa cggggcgagc gcgagcccgc
      661 ccatcttcaa ctggcgcagc accagctcgc gcccgcgccg ccaggtggtc atcacgatga
      721 acaccaggcc gcccagcgca agcgggaacc agccgccgct ctcgaccttg agcaggttgg
      781 cgccgaagaa cgcaaagtcg atcgtcaaca acggcagccc cagcgcagcc acggcgtacc
      841 atttccagcg ccattgccgc agcgcgacca agagcgccag cagcgtggtg gtgaccatcg
      901 tgccggtgac cgcgatgccg taggctgcgc cgaggttttc cgaggagcgg aaaccgagca
      961 cggccgccag caccagcacc agcagcatgg tgttgatcca cggcacgaac acctggccgg
     1021 cgacctggtc ggaggtgtgc accacgcgca tgcgcggcga gtaaccgagc tgcatcgcct
     1081 ggatcgtcat cgagtacgcg ccggaaatca ccgcctgcga ggcgatgatg gtcgccatcg
     1141 ccgccagcgc gatcatcggg accagcagcg gctgtggcac catcaggtag aacgggttgc
     1201 ggctgtccgt cggcgcctgc agcagcagcg cgccctggcc gaagtagttg agcagcagcg
     1261 cgggaaacac gatgaggctc cacgccacgc ggatcggtcg cttgccgaag tgcccgatgt
     1321 ccgcatacag cgcctcggta ccggtcagcg ccagcaccac gccgccgagc gcgacgaagc
     1381 cgaccaggcc gtgcgtcgcg aagaagcgca gcgcgtagta cggattcgcc gcggcgagaa
     1441 tcgacgggtc gcgcacgatc atgcgcacac cgagcaacgc gatcaccacg aaccacacca
     1501 gcatcaccgg cgcaaacagc ttgccgaccc gcgcggtgcc gacacgctgc agcaggaaca
     1561 gcgcgagcag gatcaccgcg ctgcccggca tgatccaggc ctccagctcg ggcgcggcca
     1621 ccttgatgcc ttcgacggca gacagtaccg agatggccgg ggtgatcacg ccgtcgccgt
     1681 agaacagcgc ggcaccgaac acggcgatga tcgcgaccag ccagcgcagc gtcggcgcgt
     1741 tgcgcacgct gcgctgggcc agggcgagca gcgccacgat gccgccctcg cccttgttgt
     1801 cggcgcgcat cacgaacagc acgtacttga tgcacaccac gacgatcagc gaccacagca
     1861 ccagcgacag cacgccgagc accgtcgcat ggttgacccc cagcccgcgc gtgttgccga
     1921 acacctcctg caacgtgtac agcgggctgg tgccgaggtc gccgaacacg acgccgacgg
     1981 cgcccacggt cagcgtgcgc agcggcaggt tggccagcgt tgcgtggttt cccgatgctt
     2041 cgggtgccgt ggcggaagag gtcgtcatcg atggttttcc ggttcgtccg gggcggcatt
     2101 gtcgtcgatc ctgggggcgg cgggattggc gtgcgatgcc aggcatggac ggccccaggc
     2161 atgtcacgcg ggaatcaccc cgtggcctgg tgccatgact tccagcgcat gtactagtgt
     2221 tcactcaaca ctatgttgat gatcgttcaa caaccaggtt cggacaggcc ggtggatgac
     2281 gtcgccgatc aactgaagaa atttcgcaag gagctttccg cgggcaccgt gtcgctggtg
     2341 ctgctggcgg tgctggggca gtcgtgccag ccgatgtatg gctaccagat cgccaagcgg
     2401 ctggagcagg taggcgaggg cgtgctggcc ggcaagcaga gtgcgctgta cccggtgctg
     2461 cgcaacctcg aaggcgcggg cctgctggtc agcgacgtcg agccttcggt gagcgggccg
     2521 ccgcggcgct actaccacat cacccaatcc ggtcgcgaag tgctgcgcgc gtggatcgcc
     2581 gcgtggaacg ccagtcgcga cagtgtcgat caggtactcc ggggagaact gcaatgaacc
     2641 catcgcccac accgccgcgc accatcgcgg aatatctcga gcggctgcgt gccgcactgc
     2701 agggcgccga tcccgcactg atccaggacg cgctgtacga cgccgaggag cacctgcgcg
     2761 ccgagctgta cgagcgcccc ggccgcgacg aggcggcgat gctcgaacag gtggtgcaga
     2821 gctacggcgc acccgatgaa gtggccgaga tctaccgcga ccaggagatc aggatccagc
     2881 gtgcgatccg tccgccgccg ccgccgcggc gacgctcggc cagcggccgc ttcttcgggg
     2941 tgatcgccga cccgcgagcc tggggtgcgc tgctctattt gctgttcggg ctggtcaccg
     3001 gcatcgcgta tttcacctgg gtggtggccg gtgtggcgat gtcgatgggc ttgtcagtgc
     3061 tcatcatcgg cttgccgttc atcgtgctgt tcttcggcag cgtgcgcagc tttgcgctgc
     3121 tggaagggcg cctggtggaa accatgctag gcgtgcgcat gccgcgacgg ccgccgtatc
     3181 cggtcgccca tcttccgatc tggaagcgta tcggcgcgat gttcaccgac ccgcgcagct
     3241 ggagctcgat gctgtacggg ctgttgcaac tgccgctggg tatcttctac ttcaccctga
     3301 tcgtgacctg gcgtgctgtc gccctgggct ttatcgccgc gcccgcgctg aagctggtcg
     3361 ccatgctcgg gcactgggat accggcacct gcaccggcca gccggcatgg ctctgcgatg
     3421 gcatcgagtg gtggagcggc tgggctggcg ccacggtgtt gtgcgtgttc ggcctgctgc
     3481 tgttcttcag cctgttgcac gtggcacgcg gcctcggcca tctgcacgga cagctggcca
     3541 agcagttgct ggtgcgccgc tcctgaagcc cgacctgcag gggcttcgcc gcggccacca
     3601 caacgcagga cggccgcctt gcggcggccg tcctgggtat tgcgcgacgc ggatgcttac
     3661 ccgcggtgtg cgcgccggcg gtcgatctcg gtgagccact tcttgcgcag ccggatcgcc
     3721 ttgggcgtga cttccaccag ctcgtcgtcc tcgatgaaat ccagtgcctg ttcgagcgac
     3781 atgcgtaccg gcggggtgag ctggatgcct tcgtccttgc cggccgcgcg catgttggtg
     3841 agctgcttgc cgcgcaggca gttcaccgtg aggtcgttgt ccttggcgtg gatgccgacc
     3901 agctggccct cgtacacctc gtcgccttcg ccggcgagca ggcggccgcg atcctgcagc
     3961 atgttgagcg cgtaggccgg gcacgggccg gtgccgttgg agatcatcac gccgttctgg
     4021 cgcttggcga tctggccttc ttccttcgga ccgtaatggt cgaacacgtg gaacagcagg
     4081 cccgaaccct gggtgagggt cttgaactgg ttctggaagc cgatcaggcc gcgcgccggg
     4141 atcttgtagt cgaggcgaac gcgtcccatg ccgtccggct ccatgttgac caggtcggcg
     4201 cggcgctcgc cgagcgc
//
LOCUS       DASSVL010000377         3674 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_601875, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000377 DASSVL010000000
VERSION     DASSVL010000377.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3674)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3674)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3674
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_601875"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(138..935)
                     /locus_tag="VFM52_06630"
     CDS             complement(138..935)
                     /locus_tag="VFM52_06630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017463727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HET8764878.1"
                     /translation="MSFRFAGFRPAALGAAAALMFAFGAGTVAAQDSAAAASTPAPAG
                     TAAPAAASTAAAPAAAAAPAVAEAVKPGDPKVGQTKATACAACHGADGNSTDPQYPKL
                     AGQSEQYIVRQLENFKSQKRKNAIMFGMASTLSEQDMHDVAAYFSSQKRLPGVADQAL
                     VADGQKLYREGDAKAGVPACMACHGMDGRGNPGAMYPAIEGQHAQYVQTQLKAWHDGD
                     AWGTDPHSQIMPTIAKKLSADDIAAVSSYIEGLHPAAATTKSAPATP"
     gene            1042..1659
                     /gene="yihA"
                     /locus_tag="VFM52_06635"
     CDS             1042..1659
                     /gene="yihA"
                     /locus_tag="VFM52_06635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019463772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTP-binding protein
                     YihA/YsxC"
                     /protein_id="HET8764879.1"
                     /translation="MPNPLQRAQFALAAHRISQLPADTGAEVAFAGRSNAGKSSALNA
                     LTGQKSLARTSKTPGRTQQMVVFALPADAGGEPLRLVDLPGYGYAKVPEELRAHWRHE
                     IDAYLQQRASLRGVVLIADIRHPLKAFDRQMLDFCFTSGLPCHLLLTKADKLSRNQAA
                     QALAAVRKSFPDGLHATLQAFSTPAGTGVDEARTRVVELLHTPRG"
     gene            complement(1685..2176)
                     /locus_tag="VFM52_06640"
     CDS             complement(1685..2176)
                     /locus_tag="VFM52_06640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014645821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0033745 - L-methionine-(R)-S-oxide
                     reductase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HET8764880.1"
                     /translation="MFEVKPLSHATKPELYADLAQQARSLVGGEPSMVANAANFSALV
                     YHGLPDINWCGFYLHDGNELVVGPFQGKPACIRIALGRGVCGTAARTRETQVVRDVSV
                     HPNHVYCDTASQSEIVVPLVRADGSLFGVWDVDSPHTNRFDDEDRAGMEALCAAFMDA
                     AGL"
     gene            2407..3084
                     /gene="bioD"
                     /locus_tag="VFM52_06645"
     CDS             2407..3084
                     /gene="bioD"
                     /locus_tag="VFM52_06645"
                     /EC_number="6.3.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008215931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004141 - dethiobiotin synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009102 - biotin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dethiobiotin synthase"
                     /protein_id="HET8764881.1"
                     /translation="MARSYFIAGTDTGIGKTHASCALIHALRARGLRTTGMKPVASGC
                     LPSPAGLVSEDAQALRAASSPPLPAYALSNPAALREPLSPHLAAEHDGVTIGLPPLRV
                     AFDALCRTHEAVVVEGVGGWRVPLAPGLYASEIPRAWQLPVIFVVGLKLGCLNHTLLS
                     VEAIRADGCTLAGWIANRIDPAMDAVDENLATLRERLPAPCLGVLPHGVAAEAAAAAL
                     DLAALGM"
     gene            3186..>3674
                     /locus_tag="VFM52_06650"
     CDS             3186..>3674
                     /locus_tag="VFM52_06650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007510976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptidyl carboxypeptidase II"
                     /protein_id="HET8764882.1"
                     /translation="MLPLRTIVIATSIALAGCSQGSNDAAKTAPAPGTSAPAKAASAA
                     PVADAAAANPFFAASTLPFQAPPFDKIKDADYQPAIEKGMAEQLAEVRKIADNPEPPT
                     FENTYVALEKTGVLLNRVMAVFSGVTGANTDDTLQKVQETIAPELAKHQDAIYLDDKL
                     FAR"
BASE COUNT          545 a         1306 c         1263 g          560 t
ORIGIN      
        1 tggcggaatg cccgcacgcg ctcagcgcca gcacggcggc gcacaccaac atcagacgct
       61 tcaacatggg agttacctcg atggagccgg atcgccgctg cgcggccgga ccggctggcc
      121 ggcccggcga gtcgccgtca cggcgtggcg ggtgcgctct tggtggtggc cgcagccggg
      181 tgcaggcctt cgatgtagct ggacaccgcg gcgatgtcgt cggcgctcag cttcttcgcg
      241 atcgtcggca tgatctgcga gtgcggatcg gtgccccacg cgtcgccgtc gtgccacgcc
      301 ttgagctggg tctgcacgta ctgcgcgtgc tggccctcga tcgccgggta catcgcgccg
      361 gggttgccgc gcccgtccat gccatggcag gccatgcacg ccggaacccc ggccttcgca
      421 tcaccctcgc ggtagagctt ctgcccgtcg gcgaccaggg cctggtcggc cacgcccggc
      481 aggcgcttct ggctggagaa atacgcggcg acgtcgtgca tgtcctgctc ggagagcgtc
      541 gatgccatgc cgaacatgat cgcgttcttg cgcttctggc tcttgaagtt ttccagctgg
      601 cggacgatgt actgctcgct ctggccggcc agcttcgggt actgcggatc ggtcgaattg
      661 ccgtcggcgc cgtggcaggc ggcgcacgcc gtggccttgg tctggccgac tttcggatcg
      721 cccggtttca ccgcctcggc aaccgccggt gccgcagccg cagctggcgc cgcagcggtg
      781 ctggcggctg ccggcgcggc cgtgcccgcc ggcgccggcg tgctggccgc ggcagcggag
      841 tcctgcgccg ccaccgtgcc cgcgccgaac gcgaacatca atgcggccgc ggcacccagc
      901 gcagccggcc gaaaacccgc gaaccgaaaa ctcatacact gctctcccga gaaacctcga
      961 aggctgccat cgcgggccgg catcggcaca gcgggcagaa accatcggat tatctccgtg
     1021 ccctcgtact ccggtcaaac gatgcccaac cccctgcagc gcgcgcagtt cgcccttgcc
     1081 gcccaccgta tcagccagtt gcccgccgac accggtgccg aagtcgcgtt cgccggtcgc
     1141 tccaacgccg gcaagtccag cgcgctcaat gcgctgaccg gccagaagag tctcgcgcgc
     1201 acctcgaaga caccgggacg cacccagcag atggtggtgt tcgcgttgcc ggcggacgcg
     1261 ggcggcgaac cgctgcgcct ggtcgacctg cccggctacg gctacgccaa ggtgccggag
     1321 gagctgcgcg cgcactggcg gcacgagatc gacgcctatc tgcagcagcg cgcgagcctg
     1381 cgcggcgtgg tgctgatcgc cgacatccgc cacccgctca aggcgttcga tcgccagatg
     1441 ctggatttct gcttcaccag cggcctgcca tgccatctcc tgctgaccaa ggccgacaag
     1501 ctctcgcgca accaggcggc gcaggcgctg gccgcggtgc gcaagagctt ccccgacggc
     1561 ctgcacgcga cgctgcaggc gttttccacg cctgccggca ccggcgtgga tgaagcgcgg
     1621 acgcgcgtcg tcgaactgct gcacacgccg cgcgggtaga tcctgcgtcc gcgcagccgg
     1681 gcggctacag gccggcggcg tccatgaacg ccgcgcacag ggcttccatg ccggcacgat
     1741 cttcgtcgtc gaagcggttg gtgtgcgggc tgtccacgtc ccacacgccg aacaggctgc
     1801 cgtcggcgcg caccagcggc accacgattt ccgattgcga ggcggtgtcg cagtagacgt
     1861 ggttggggtg cacgctgacg tcgcgcacca cctgggtctc gcgggtgcgc gccgcggtgc
     1921 cgcacacgcc gcgcccgagc gcgatgcgga tgcatgccgg cttgccctgg aacgggccga
     1981 ccaccagctc gttgccgtcg tgcaggtaga agccgcacca gttgatgtcg ggcaggccgt
     2041 ggtagaccag cgccgagaag ttcgccgcgt tggcgaccat gctcggctcg ccgccgacga
     2101 ggctgcgcgc ctgctgcgcg aggtcggcgt agagctcggg tttggtggcg tgcgaaaggg
     2161 gtttgacttc gaacatgctg gaaccttggt agccgggagt cgcggcggtg tcccgcgtgc
     2221 gtggatgccg cgcaggcgtc gccgcctcga acgcctcgcc gccggaaaac gctgcactgg
     2281 atattatgcg cagtccgtca accaggacat gcagcatgca cgcgatcggg cagggtgcga
     2341 gatgccgggc cacgccgtgg tcggtgcggc gccaatgcgc tgccgttgcc ggccaggcgt
     2401 gaaccgatgg cccgcagcta tttcatcgcc ggcaccgaca ccggcatcgg caagacgcac
     2461 gcgagttgcg cgctgatcca cgcactgcgc gccaggggct tgcgcaccac cggcatgaag
     2521 ccggtcgcca gtggctgcct gccatcgcca gctggcttgg tcagcgagga tgcgcaggcg
     2581 ctgcgcgccg cgagcagccc gccgttgccg gcctacgcgc tgagcaatcc ggcggcgctg
     2641 cgcgagccgt tgtcgcccca tctggccgcc gaacacgatg gcgtgaccat tggcttgccg
     2701 ccgctgcgcg tcgcgttcga cgccttgtgc cgcacacatg aagcggtggt ggtcgaaggc
     2761 gtcggtggct ggcgcgtgcc gctcgcgccg gggttgtacg cctcggagat accgcgcgcg
     2821 tggcagctgc cggtgatctt cgtcgtcggg ctcaagctcg gctgcctgaa ccacacgctg
     2881 ctcagcgtcg aggcgattcg tgccgacggc tgcacgctgg ccggctggat cgccaaccgc
     2941 atcgatccgg cgatggacgc ggtggacgag aacctcgcca ccttgcgcga acgcctgccc
     3001 gcaccttgcc tcggcgtgct gccgcatggc gtggcggcgg aagccgcggc ggcggcgctc
     3061 gatctcgcgg cgctcggcat gtagcgcgct gcgctgcggc tggccttgtg ccggccggaa
     3121 tcgctacagt caggaattac tcactccggc gccgcgcgtg cggcgcccct gaccgggacc
     3181 attgcatgct tcctctacgc acgatcgtga ttgccaccag catcgccctc gccggctgct
     3241 cgcagggatc gaacgacgcc gccaagaccg cgccggcgcc cggcacgagt gcgccggcca
     3301 aggccgccag tgccgcgccg gtggcggatg ccgcggccgc caacccgttc ttcgccgcca
     3361 gcacgctgcc gttccaggcg ccgccgttcg acaagatcaa ggatgccgac taccagccgg
     3421 cgatcgagaa gggcatggcc gagcaactgg ccgaggtgcg caagatcgcc gacaaccccg
     3481 agccgcccac gttcgagaac acctacgtgg cactggagaa aactggcgtg ctgctgaacc
     3541 gcgtgatggc ggtgttcagc ggcgtcaccg gcgccaacac cgacgacacg ctgcagaagg
     3601 tgcaggaaac catcgcgccg gaactggcca agcatcagga cgcgatctac ctcgacgaca
     3661 agctgttcgc gcgc
//
LOCUS       DASSVL010000378         2096 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_135695, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000378 DASSVL010000000
VERSION     DASSVL010000378.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2096)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2096)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2096
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_135695"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..401
                     /locus_tag="VFM52_06655"
     CDS             <1..401
                     /locus_tag="VFM52_06655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007804578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8764883.1"
                     /translation="QRAGLAHAMRGFDSADDLVATFGEQQRTAPQPTYLSIDKDVFAA
                     DVAQTNWDQGRFQLRHALGVIDSLRPDLVGSDINGEVSYYRYRAWWKRKLSALDEQPA
                     IDPAKLAGWHAQQHALNLQLLAAIDARMAR"
     gene            540..1628
                     /locus_tag="VFM52_06660"
     CDS             540..1628
                     /locus_tag="VFM52_06660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8764884.1"
                     /translation="MATLYPAARRSLSIACDDLMARRNVVAVGIGYKRTGGHKTRELA
                     IVCSVLAKRPRAALAQADIIPADIQGVRTDVVPTGPIFAQQSRTARVRPAPGGVSIGH
                     VSITAGTLGCLVSKGGRLHLLSNNHVLANSNDASAGDAILQPGVADGGKDPDDRIAQL
                     REWVPIVFDGDRGGNDGGGGGNPPPCQLDEKVVGLLNAAAAAIGSRTRVQIVRQPVAR
                     AAANLVDCAIAEPLDPADVSPDILGIGKLAGLGSGELGMAVKESGRTTAVTTGTIEQV
                     DVTVQVDYGSGRVATFTDQLMAGAMSQGGDSGSAVLDGDDRLVGLLFAGGTNTTIINR
                     IENVFQALQLELPESPAAPVAKGRSRSR"
     gene            1634..1861
                     /locus_tag="VFM52_06665"
     CDS             1634..1861
                     /locus_tag="VFM52_06665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8764885.1"
                     /translation="MLAHLRAVKQVHEAHWLAQAGVVAVGIGQAADGRPAIVVSVERD
                     DDAIRQLIPTQVDGVPVELRLAGPIRAQDPS"
BASE COUNT          329 a          718 c          752 g          297 t
ORIGIN      
        1 cgcagcgtgc gggcctggcg cacgccatgc gcgggttcga cagcgccgac gatctggtcg
       61 ccaccttcgg tgagcaacag cgcacggcgc cgcagccaac ctatctgtcg atcgacaagg
      121 acgtgttcgc cgccgacgtg gcgcagacca actgggacca gggccgcttc cagctgcgcc
      181 acgcgctggg cgtgatcgac agcctccggc ccgacctcgt cggcagcgac atcaacggcg
      241 aggtgtcgta ctaccgctat cgcgcgtggt ggaaacgcaa gctctccgcg ctcgacgagc
      301 agcccgcgat cgacccggcc aagcttgccg gctggcacgc gcagcaacac gcgctgaacc
      361 tgcagttgct cgcggcgatc gacgcgcgga tggcgcggtg attccgattc aagccagcac
      421 tcgccgcctc cacgaacgcg ggcgttgcgg gtgccacgca cttcagtcgt gattcacgcc
      481 ctgatgacgg ggggtgacac actgccttgg cacatccgcg cgtacctcgg aggtgaccca
      541 tggcaactct ctaccctgcc gcacgtcgca gcttgtccat tgcctgcgat gacttgatgg
      601 cgcgacgcaa cgtcgtggcc gtcggcatcg gctacaagcg aacgggcgga cacaagaccc
      661 gcgaactcgc gatcgtctgc tcggtgctgg ccaagcggcc gcgtgcggcg ctcgcgcaag
      721 ccgacatcat tcccgccgac atccagggcg tgcgcaccga cgtggtgccg acggggccga
      781 tcttcgccca gcagtcgcgt acggcgcgtg tgcgaccggc gccaggcggc gtcagcatcg
      841 ggcacgtcag catcaccgcc ggcacgctgg gctgcctggt gagcaagggc ggacgcctgc
      901 acctgctgtc gaacaaccac gtgctcgcca acagcaatga cgcgtcggcc ggcgacgcga
      961 tcctgcagcc gggcgtggcc gatggtggca aggaccctga cgaccgcatc gcgcagctgc
     1021 gcgagtgggt gccgattgtt ttcgacggcg acaggggcgg gaatgatggt ggcggtggcg
     1081 gcaacccgcc gccgtgccag ctggacgaga aggtggtcgg cctgctcaac gccgcggccg
     1141 ccgcgatcgg cagccgcacc cgcgtgcaga tcgtgcgcca gccggtcgcg cgggcagccg
     1201 ccaacctggt cgattgcgcg attgccgagc cgctcgatcc ggcggacgtg agcccggaca
     1261 ttcttggcat cggcaagctc gccgggctcg gcagcggcga gctgggtatg gcggtgaagg
     1321 agagcggccg caccacggcg gtgacgaccg ggacgatcga gcaggtcgac gtcaccgtgc
     1381 aggtcgacta cggttccggt cgcgtcgcca ccttcaccga ccagctgatg gccggtgcga
     1441 tgagccaggg cggcgacagc ggctcggcgg tgctggacgg cgacgatcgc ctggtcgggc
     1501 tgctgttcgc cggcggcacc aacaccacga tcatcaaccg catcgagaat gtgttccagg
     1561 cactgcaatt ggagctgccg gagtcgccgg cggcgcccgt ggcgaaaggc cggagccgct
     1621 cccggtgaac ggggtgctgg cgcacctgcg tgcggtcaag caggtccacg aggcgcactg
     1681 gctggcgcag gcgggggtgg tggcggtcgg catcgggcag gcggccgacg gccgcccggc
     1741 catcgtcgtt tccgtcgagc gggacgacga cgcgatccgg cagctgatcc ccacgcaagt
     1801 cgatggcgtg ccagtggaac tgcggctcgc cgggccgatc cgcgcgcagg atccgtcgtg
     1861 agcgccgggc accgttgaag gcggccaagg gcgttggagt ggcgagcccg gcgggctgaa
     1921 acccacgccg tccatgggct gccgcaagca cgctgcatcc atcttcgcca atgccgggcg
     1981 cgggttggag tccgcccatg cgctgcgggg tgccgccggg cgatgcgccc ggcgcggctg
     2041 gtggcggaga aaccgggtac agttcccgcc ttccatgaac accctgtccc ctcatg
//
LOCUS       DASSVL010000379         2654 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1138684,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000379 DASSVL010000000
VERSION     DASSVL010000379.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2654)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2654)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2654
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1138684"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(16..558)
                     /locus_tag="VFM52_06670"
     CDS             complement(16..558)
                     /locus_tag="VFM52_06670"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019304550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit delta"
                     /protein_id="HET8764886.1"
                     /translation="MTQALTLARPYARAAFGIARDEAAASNGSYAGWSQALGFAAQVA
                     GDPRVAGLLGDPRLTDAAATELLAPPQAPASFARFLAMLADNRRLALLPEIAGLYEEL
                     RAEAERVVKATVTSASALPSAELDAIKAALRKRFGREVEVETAVDATLIGGAVIDAGD
                     VVIDGSLKGKLGRLQAALSH"
     gene            complement(562..1032)
                     /locus_tag="VFM52_06675"
     CDS             complement(562..1032)
                     /locus_tag="VFM52_06675"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016901014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015078 - proton transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit B"
                     /protein_id="HET8764887.1"
                     /translation="MLPNLTLVIQGLAFFAVAWLVMKFGWPHIIGAIEERQQKIAEGL
                     AAADRSQKDLAQAQEKANDALKEARAKANEIIEQAHQRASQIVDAAKTDALAEAGRQK
                     ALAEAEIAAAANRAREDLRKQVSALAVTGAEKLLRREIDANAHKALLDELAAEI"
     gene            complement(1120..1395)
                     /gene="atpE"
                     /locus_tag="VFM52_06680"
     CDS             complement(1120..1395)
                     /gene="atpE"
                     /locus_tag="VFM52_06680"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007082359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015078 - proton transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit C"
                     /protein_id="HET8764888.1"
                     /translation="MENAALIAEVLKFTVIAAGLLIGLGALGTAIGFAILGGKFLEGA
                     ARQPELTPMLQTKMFIVAGLLDAVPMIGVAIALLLLFANPLLGSLAG"
     gene            complement(1469..2338)
                     /gene="atpB"
                     /locus_tag="VFM52_06685"
     CDS             complement(1469..2338)
                     /gene="atpB"
                     /locus_tag="VFM52_06685"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004773235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045263 - proton-transporting ATP
                     synthase complex, coupling factor F(o) [Evidence IEA];
                     GO_function: GO:0015078 - proton transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit A"
                     /protein_id="HET8764889.1"
                     /translation="MAATEPATGGSTEYINHHLHHLQVKVGDGAFMTLNVDTLFFTLV
                     LSALFVFFFLRAARKATPGVPGKFQSLVEIVVGFVDGLVRETFHGRSKLIAPLSITIF
                     CLVFLMNFMDMVPVDLLPWMWASGYEAAGHDPAHAYLRAVPTADLNTTLGLSLAVFLL
                     IQVFGISHKGVGGFTKEIFTAPFHAESTGMKIALAPANVLLRLIEEGVRPLSLSLRLF
                     GNMYAGELIFILIALMTLGSSLGHASTWIMGGAQLVSGFAWTAFHVLIITLQAFIFMM
                     LTIVYLSMSAESH"
     gene            complement(2353..>2654)
                     /locus_tag="VFM52_06690"
     CDS             complement(2353..>2654)
                     /locus_tag="VFM52_06690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8764890.1"
                     /translation="ALVAAGPRQGLAAAAGGIAMLAGNGLAAAVALGGGIQPAGAAFA
                     RLLLGTLGKWVVALVVIVVALGPLRLPPLPLLAGLAAGMLAYLLALNLRTQRRQR"
BASE COUNT          417 a          889 c          955 g          393 t
ORIGIN      
        1 aagtgttctg gtgggttagt gcgacagcgc ggcctgcagg cggcccagct tgcccttcag
       61 cgagccgtcg atgacgacgt cgccggcgtc gatcaccgcg ccgccgatca gcgtcgcgtc
      121 gaccgcggtc tcgacctcga cctcgcggcc gaagcgcttg cgcagcgcgg ccttgatcgc
      181 gtcgagctcg gcggacggca gcgccgacgc ggaggtgacg gtggccttga ccacgcgctc
      241 ggcttccgcg cgcagctctt cgtacaggcc ggcgatctcg ggcagcaggg cgaggcggcg
      301 gttgtccgcc agcatcgcca ggaagcgcgc gaacgaggcc ggggcctgcg gcggggcgag
      361 cagctcggtg gccgcggcgt cggtgaggcg cgggtcgccg agcaggccgg cgacgcgcgg
      421 atcccccgcg acctgcgcgg cgaagccgag cgcctgcgac cagccggcat agctgccgtt
      481 cgaagccgcc gcttcgtcgc gcgcgatgcc gaaggcggcg cgggcgtacg ggcgggcgag
      541 ggtcagggcc tgggtcacgg ctcagatctc cgccgcgagc tcgtcgagca gcgccttgtg
      601 cgcgttcgcg tcgatctcgc ggcgcagcag cttctcggcg ccggtcacgg cgagcgcgga
      661 cacctgcttg cgcaggtcct cgcgcgcacg gttcgcggcg gcggcgatct cggcctccgc
      721 cagcgccttc tgccggccgg cctcggcgag cgcgtcggtc ttggccgcgt cgacgatctg
      781 gctggcacgc tggtgcgcct gctcgatgat ctcgttggcc ttcgcgcgcg cttccttcag
      841 cgcgtcgttg gccttttcct gcgcctgcgc gaggtccttc tggctgcggt cggcagccgc
      901 caggccttcg gcgatcttct gctggcgctc ttcgatcgca ccgatgatgt gcggccagcc
      961 gaatttcatc accagccagg cgaccgcgaa gaacgcgagg ccctgaatga cgagggtgag
     1021 gttgggtagc atttgatatt gctcctggag ccggctcctg gtgccggcgg cgcgatgccg
     1081 ccggcgatgc cgtgaccgtt tgcggttcgc gggggccgat cagccggcca gcgagcccag
     1141 cagcgggttg gcgaacagca gcagcagcgc gatcgcgacg ccgatcatcg gcacggcgtc
     1201 gagcaggccg gcgacgatga acatcttggt ctgcagcatc ggggtcagct ccggctggcg
     1261 cgccgcgccc tcgaggaact tgccgccgag gatggcgaaa ccgatcgcgg tgccgagggc
     1321 accgaggccg atcagcaggc cggccgcgat gaccgtgaac ttcagcactt cagcgatgag
     1381 ggcagcgttt tccatggtgt actccggttg gatccgatcg tgttgcttgg tggaaaggaa
     1441 ggggttggaa cgaaatccgg cgacgcgact agtggctttc ggccgacatg ctgaggtaga
     1501 cgatcgtcag catcatgaag atgaaggcct gcagggtgat gatcagcacg tggaacgcgg
     1561 tccaggcgaa gcccgagacc agctgcgcgc cgcccatgat ccaggtggag gcatggccga
     1621 gcgacgagcc cagcgtcatc agcgcgatca ggatgaagat cagctcgccg gcgtacatgt
     1681 tgccgaacag tcgcagcgac aggctcagcg ggcgcacgcc ttcctcgatc aggcgcagca
     1741 gcacgttcgc cggcgccagc gcgatcttca tgccggtgga ttcggcgtgg aacggcgcgg
     1801 tgaagatttc cttcgtgaag ccgccgacgc ccttgtgcga gatgccgaac acctggatca
     1861 gcaggaacac cgccagcgag aggccgagcg tggtgttgag gtcggcggtc ggcacggcgc
     1921 gcaggtaggc gtgcgcggga tcgtggccgg cggcctcgta gccggacgcc cacatccagg
     1981 gcagcaggtc gaccggcacc atgtccatga agttcatcag gaacacgagg cagaagatgg
     2041 tgatcgacag cggcgcgatc agcttgctgc ggccgtggaa ggtctcgcgc acgaggccgt
     2101 cgacgaagcc gacgacgatc tcgaccagcg actggaactt gcccggcacg cccggcgtcg
     2161 ccttgcgcgc cgcgcgcagg aagaagaaga cgaacagcgc ggacagcacg agggtgaaga
     2221 acagcgtgtc cacgttcaag gtcatgaacg cgccgtcgcc caccttcacc tgcaggtggt
     2281 gcaggtggtg gttgatgtat tcggtggaac cgccggtggc cggttccgtc gccgcgatgt
     2341 gctcagtcgg attcaacgct gccgcctctg tgtcctaagg ttcaacgcca gcaggtaggc
     2401 gagcattccg gccgccagtc ccgccaggag cggcaacggg ggcagccgca agggccccag
     2461 tgccaccacg atcaccacca gtgccacgac ccacttgccc agcgtgccca gcaggaggcg
     2521 cgcgaacgcg gcacccgccg gctggatccc gccgcccagc gccaccgcgg ccgccaggcc
     2581 gttgccggcc agcatcgcga tgccccccgc cgccgccgcc agcccctgcc gcggacccgc
     2641 cgcgaccagg gcca
//
LOCUS       DASSVL010000380         2461 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_446735, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000380 DASSVL010000000
VERSION     DASSVL010000380.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2461)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2461)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2461
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_446735"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(44..1285)
                     /locus_tag="VFM52_06695"
     CDS             complement(44..1285)
                     /locus_tag="VFM52_06695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008212464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EmrA/EmrK family multidrug efflux transporter
                     periplasmic adaptor subunit"
                     /protein_id="HET8764891.1"
                     /translation="MTSPINPHPGAEDDAAAQLKAQRLRKRRWLLRGLVALVVVVGIG
                     WALYHFLVGRWYEGTDDAYVDGNVVQITPQVPGTVISIGADDNDYVRQGQTLVKLDPS
                     DADVALAQAEAALAQAVRKVRGLYSTVHTSKADVAARESAVQQAQADYKRRKGLADSG
                     AISAEELAHARDALTTAQSALAAAQAQLATTDALVSDTEISTHPDVKAAAAAVRAAWL
                     NDQRTTLVAPVAGYVAKRTVQVGQRVQPGMPLMAVVPLHQVWVDANFKETQLQDMRIG
                     QPVTLTSDVYGGGVTYHGRVAGLGIGTGSAFSLLPAQNASGNWIKIVQRLPVRIELDA
                     KDLDKYPLRIGLSMNVDVNLHDQSGAMLAKNAPEHPVFSTDVYAHDRAEANALIARII
                     HANSGPITESAPAKGAAIARH"
     gene            complement(1282..>2461)
                     /locus_tag="VFM52_06700"
     CDS             complement(1282..>2461)
                     /locus_tag="VFM52_06700"
                     /inference="COORDINATES: protein motif:HMM:TIGR01845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="efflux transporter outer membrane subunit"
                     /protein_id="HET8764892.1"
                     /translation="AARKPTLNGGASAAGARVPPILPPLASGHFGVIRYGYLSFKWDL
                     DLWGGKRAAWQAAVGNARAAEVDAQAARLKLSADVVQAYFQLAGAYAQRDLANEELQR
                     ADDFLKLTHKRVASGIDSKFSLARIEAESASDRAHLEAADNAVHSAGLVLAALLGAGP
                     DRALSIERPALPAIPALSLPSDLPADLLGRRPDVVAARWRVEAAGHDIKAAKTRFLPN
                     IGISSLAGLLAPSSMNLFSLQNRFYTISPALSLPIFEGGALRANLAGKDAARDIAVAQ
                     YNQTQVHAINQVAGQVDDLQSLSAQVQDAGDARASAEDAYTLAMKRYRAGVGNYLEAL
                     SVRQELIAAEQQLASLQTRRAGAWAALNEALGGGFKPAADAPSLATAPQQESETKAHR
                     "
BASE COUNT          363 a          832 c          847 g          419 t
ORIGIN      
        1 agattgcggc gaactccggg gacggcgatc agggccgatc gcatcaatgc ctcgctatcg
       61 cggcgccctt tgctggggca ctctcggtga tcgggccgct gttggcgtgg atgatcctgg
      121 cgatcaacgc gttcgcctcg gcgcggtcat gcgcgtagac gtcggtgctg aacaccggat
      181 gctccggagc attcttcgcc agcatggcac cggactggtc gtgcaggttg acatccacgt
      241 tcatcgacaa gccgatccgc aaggggtact tgtccaggtc cttggcgtcg agctcgatgc
      301 gcaccggcag gcgctgcacg atcttgatcc agttgcccga agcgttctgc gccggcagca
      361 acgagaacgc gctgcccgtg ccgatgccga gtccggccac gcgaccgtgg taggtcacgc
      421 cgccgccgta gacgtcggac gtcagcgtca ccggctggcc gatgcgcatg tcctgcaact
      481 gggtttcctt gaagttcgcg tcgacccaca cctgatgcag cggcaccacc gccatcagcg
      541 gcatgccggg ttgcacgcgc tgcccgacct gcacggtgcg cttggcgacg taaccggcca
      601 ccggggcgac aagcgtggtg cgctggtcgt tcaaccaggc cgcgcgcacc gcggcggctg
      661 ccgccttcac gtccgggtgc gtggagattt cggtgtcgga caccagcgcg tcggtggtcg
      721 cgagttgcgc ctgcgccgcc gccagcgcgc tctgcgcggt agtcagcgcg tcgcgtgcgt
      781 gcgccagttc ctcggcggag atcgcacccg agtccgcaag gcccttgcgg cgcttgtagt
      841 cggcctgcgc ctgctggacc gccgattcgc gcgcggcgac atcggccttc gaggtgtgca
      901 cggtgctgta gaggccgcgc accttgcgca ccgcctgcgc cagcgccgct tcggcctgcg
      961 ccagcgcgac gtcggcgtcg gacggatcga gcttcaccag cgtctggccc tggcgcacgt
     1021 aatcgttgtc gtcggcgccg atgctgatca cggtgcccgg cacctgcggg gtgatctgca
     1081 ccacgttgcc atcgacatat gcatcgtcgg tgccttcgta ccagcggccg accaggaagt
     1141 ggtacagcgc ccagccgatg ccgacgacga ccaccagcgc gaccaagccg cgcagcagcc
     1201 agcgccgctt gcgcaagcgc tgcgccttca gttgtgccgc ggcatcatct tcggcgccgg
     1261 ggtggggatt gatgggagaa gtcatcgatg tgccttggtt tcggattctt gttggggtgc
     1321 ggtggccagc gacggtgcgt cggcagccgg tttgaaacca ccgccaagcg cctcgttgag
     1381 cgcggcccat gcgccggcgc ggcgggtctg caggctggcg agttgctgct cggcggcgat
     1441 cagctcctgc cgcacgctca atgcttcgag atagttgccg acgccggcgc ggtagcgctt
     1501 catcgccagg gtgtaggcgt cttcggcgct ggcgcgcgcg tcccccgcgt cctgcacctg
     1561 cgccgacagc gactgcagat catcgacctg gcccgccacc tggttgatcg cgtgcacctg
     1621 tgtctggttg tactgcgcga ccgcgatgtc gcgtgcagcg tccttgccgg cgaggttggc
     1681 gcgtagcgcg ccgccctcga agatcggcag gctcagcgcc ggtgaaatcg tgtagaaacg
     1741 attctgcagc gagaacaggt tcatcgagga tggtgcgagc agtccagcca gcgaactgat
     1801 gccgatgttc ggcaggaacc tggtcttcgc ggccttgatg tcgtggcctg ctgcctcgac
     1861 gcgccagcgt gcagccacca cgtccggacg gcgaccgaga aggtcggccg gcaagtcgct
     1921 gggcagcgaa agcgcgggaa tcgccggcag cgcgggacgc tcgatcgaca acgcgcgatc
     1981 cggacccgcg cccagcaacg ccgccagcac gaggcccgcc gaatgcacgg cgttgtcggc
     2041 ggcttcgaga tgcgcgcggt cgctcgcgct ttcggcctcg atgcgggcca gcgagaactt
     2101 gctgtcgatg ccgctggcga cacgcttgtg ggtgagcttc aggaaatcgt cggcgcgttg
     2161 cagctcctca ttggcaagat cgcgctgcgc gtaggcaccc gccagttgaa agtacgcctg
     2221 caccacgtcg gcggaaagtt tcaggcgcgc ggcttgcgcg tctacttccg cggcgcgcgc
     2281 attgccgacg gccgcctgcc acgcagcgcg cttgccgccc cacaggtcaa ggtcccactt
     2341 gaagctcaaa tagccatagc ggatcacccc gaaatggccc gacgccagcg gcggcaagat
     2401 cggcgggacg cgcgcgccgg cggcgcttgc gccaccgttc agcgtcggct tgcgcgcggc
     2461 a
//
LOCUS       DASSVL010000381         2709 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_841906, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000381 DASSVL010000000
VERSION     DASSVL010000381.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2709)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2709)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2709
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_841906"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            66..1619
                     /locus_tag="VFM52_06705"
     CDS             66..1619
                     /locus_tag="VFM52_06705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007080271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5597 domain-containing protein"
                     /protein_id="HET8764893.1"
                     /translation="MPSFAAAPPRIVTDHGRHLLLVDGQPYLVLGAQVNNSSAWPAML
                     PAVWPAMDALHVNTVQVPIAWEQIEPTEGHFDFSFLDTLVTQAREHQVRLVLLWFATW
                     KNNGPAYAPAWVKLDNRRFPRVVKQDGDTLNSLSPFGAATLAADRTAFVALMKHLRAI
                     DGGPHTVIMVQVENESGTYGTDRDHSAAGDKLLQSPVPAAVLAKTGRKAGTWANVFGK
                     DAAEFSYAWAIAHYIDQVAAAGKVAYDLPMYVNVALRDPFHPGPPGGYSSGGPTDNVL
                     DIWRAAAPALDLIAPDIYLPEYAKYTAVLDRYARADNPLFVAETGNAAPYARYVFATL
                     GHQGIGFSPFGMDYTGYSNWPLGAQKVDADTIAPFALDYALLRPIAALVAKANAEGKV
                     WGVSEPEQTHTHTQQIDLGDWTAHVGYGLPQFGVPEAKGNPTPQGGVLIVQLGRNEYL
                     VAGCHARVSFQPSGRNAGKHSLFDRVEEGRYVDGQWQFLRVWNGDQTDYGLNLTSQPQ
                     WLHVKLATY"
     gene            1631..>2709
                     /locus_tag="VFM52_06710"
     CDS             1631..>2709
                     /locus_tag="VFM52_06710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007508407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 3 N-terminal
                     domain-containing protein"
                     /protein_id="HET8764894.1"
                     /translation="MMGWKSFSVPLLLIALVLPALAAEPQADTAAVEHRVDGLLHQLT
                     LAQKVDLIGGVDGFNIRAEPALGMPALAMSDGPYGVRMGGNGTAYAAGIALAASWDPA
                     LAQRVGTAMGRDARARGISFLLGPGVNIYRAPQNGRNMEYYGEDPYLAGRTAIGLIDG
                     IQSQGVVAVVKHFAANNSEYDRRQINSVIAPRPLHEIYLRAFEMAVKQGHVGAVMSSY
                     NQLNGQYTAEDRGLVTGILKHDWGFNGLYMSDWGAVDDGLKAFKAGLDLEMPAADKMQ
                     PALLLPALRDGTLSKTELDDKVRRILRTAVRFGFLDRPQRDLAQPLFDPANDQVALES
                     ARESLVLLKNSNDLLPLDAGKLKTIA"
BASE COUNT          446 a          949 c          908 g          406 t
ORIGIN      
        1 gaggggacag cgccatgaga tgttggcgat ggtttttggc gtgcgtgctt gccttgggcg
       61 tcggcatgcc gtcgttcgcg gcagcaccgc cgcggatcgt gaccgaccac gggcgccacc
      121 tgctgctggt ggacggccag ccatacctgg tgctgggcgc gcaggtgaac aactccagcg
      181 cgtggccagc gatgctgccc gcggtgtggc cggcgatgga cgcgctgcac gtcaacaccg
      241 tgcaggtgcc gattgcctgg gagcagatcg agcccaccga gggccacttc gatttcagct
      301 tcctcgacac gctggtgacg caggcgcgcg agcaccaggt gcgcctggtg ctgctgtggt
      361 tcgccacctg gaaaaacaac ggcccggcct acgccccggc gtgggtgaag ctggacaacc
      421 gccgtttccc acgcgtggtg aagcaggacg gcgacacgct caattcgctg tcgccgtttg
      481 gcgcggccac gctcgccgcc gaccgcaccg cgtttgtcgc cttgatgaag cacctgcgcg
      541 cgatcgacgg cgggccgcac accgtcatca tggtgcaagt ggaaaacgag tcgggcacct
      601 acggcaccga ccgcgaccac tccgccgccg gcgacaagct gctgcaatcg ccagtgcccg
      661 ccgcggtgct ggcgaagacc gggcgcaagg ccggcacctg ggccaacgtg ttcggcaagg
      721 acgcggcgga gttctcctac gcctgggcca tcgcgcacta catcgaccag gtcgccgcgg
      781 cgggcaaggt cgcgtacgac ctgccgatgt acgtcaacgt cgcgctgcgc gatcccttcc
      841 accccggccc gccgggcggc tactccagcg gcggcccgac cgacaacgtg ctcgacatct
      901 ggcgtgcggc ggcgcccgcg ctggacctca tcgcgccgga catctacctg cccgaatacg
      961 cgaagtacac cgccgtgctg gaccgctacg cgcgcgccga caacccgctg ttcgtcgccg
     1021 aaaccggcaa cgcggcgccg tacgcgcgct acgtgttcgc caccctgggc caccagggca
     1081 tcggcttctc gccgttcggc atggactaca ccggctactc caactggccg cttggcgcgc
     1141 aaaaggtgga cgccgacacc atcgccccgt tcgcgctgga ttacgccctg ctgcgcccga
     1201 tcgccgcgct ggtggccaag gccaacgccg aaggcaaggt gtggggcgtg tccgagccgg
     1261 agcagacgca cacccacacc cagcagatcg acctgggcga ctggacagcg cacgtcggct
     1321 acggcctgcc gcagttcggc gtgcccgagg ccaagggcaa ccccacgcca cagggcggcg
     1381 tgctgatcgt gcagctcggc cgcaacgaat acctggtggc cggctgccac gcgcgcgtca
     1441 gcttccagcc gtccggccgc aacgccggca agcacagctt gttcgaccgc gtggaggaag
     1501 ggcgctacgt ggacggccag tggcagttcc tgcgcgtgtg gaatggcgac cagaccgact
     1561 acggcctcaa cctcaccagc cagccgcagt ggctgcacgt gaagctggcc acgtactgaa
     1621 aggtgtttgc atgatgggtt ggaaatcgtt ctccgtgccg ctgctgctga tcgctctcgt
     1681 cctgccggcg ctggcagccg agccgcaagc cgacacggcc gcggtcgagc atcgcgtcga
     1741 cggcttgctg caccagctca cgctggcgca gaaggtcgac ctgatcggtg gcgtcgacgg
     1801 cttcaacatc cgcgccgagc ctgcgctcgg catgcccgcg ctggccatgt ccgacggccc
     1861 ctacggcgtg cgcatgggcg gcaacggtac ggcctacgcg gccggcattg cattggccgc
     1921 gagctgggat ccggcgctgg cacagcgcgt gggcaccgcg atgggacgcg acgcgcgcgc
     1981 ccgcggcatc agctttctgc tcgggccggg cgtgaacatc taccgcgcgc cgcagaacgg
     2041 ccgcaacatg gagtactacg gcgaggaccc gtacctcgcc gggcgcaccg ccatcggcct
     2101 gatcgatggt atccagagcc agggcgtggt ggcggtggtc aagcacttcg ccgccaacaa
     2161 ctccgagtac gaccggcgcc agatcaattc ggtgatcgcg ccgcggccgc tgcacgaaat
     2221 ttatttgcgc gcgttcgaga tggcggtgaa gcagggccac gtcggcgcgg tgatgagcag
     2281 ctacaaccag ctcaacggcc agtacaccgc cgaggatcgc ggcctggtca ccggcattct
     2341 caagcatgac tggggcttca atggcctgta catgtccgac tggggtgcgg tggacgacgg
     2401 cctcaaggcg ttcaaggccg gcctcgacct ggagatgccc gcggccgaca agatgcagcc
     2461 cgcgctgctg ctgcccgccc tgcgcgacgg cacgctgtcg aagaccgaac tggacgacaa
     2521 ggtgcgccgc atcctgcgca ccgcggtgcg cttcggcttt ctcgaccggc cgcagcgcga
     2581 tctcgcgcag cccttgttcg acccggccaa cgaccaggtg gcgctggaat cggcgcgcga
     2641 atcgctggtg ctgctgaaga actccaacga tttgttgccg ctcgacgccg gcaagctcaa
     2701 gaccatcgc
//
LOCUS       DASSVL010000382         2293 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_460542, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000382 DASSVL010000000
VERSION     DASSVL010000382.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2293)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2293)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2293
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_460542"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..241)
                     /locus_tag="VFM52_06715"
     CDS             complement(<1..241)
                     /locus_tag="VFM52_06715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017462727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arylesterase"
                     /protein_id="HET8764895.1"
                     /translation="MRRFLIGLLWLAGAFGAVQAAAPARTVLVLGDSLSAAHNIAVDQ
                     GWVRLLEAWLSKMVPAWTVVNASISGETSLSGRNRL"
     gene            240..941
                     /locus_tag="VFM52_06720"
     CDS             240..941
                     /locus_tag="VFM52_06720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008212241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HET8764896.1"
                     /translation="MRDTPPVILEARDVSKSVIGPEGELAILAGVNLTVATGESFAIV
                     GASGSGKTTLLGLLAGLDTSSSGHVQLAGHALETLDEEARADLRRRLVGFVFQSFHLL
                     PALSAEENVMLPLELEGDAQARRKAHDALGAVGLDARRRHYPAQLSGGEQQRVAIARA
                     FVHAPRVLFADEPTGNLDQRTGHHIADLLFALNRDHHTTLVMVTHDHQLAARCTRHIE
                     LREGRVVTADAAVSA"
     gene            1248..>2293
                     /locus_tag="VFM52_06725"
     CDS             1248..>2293
                     /locus_tag="VFM52_06725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007507010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HET8764897.1"
                     /translation="MNLLRLSLRNLRREWRLPELRTLAGSLLLAVLALGVVATLAARV
                     ENGILASAAELIGGDVGISAPQAPPARFADRATRNHLAISRTAGFPSVAFAGERSQLL
                     DVQAVDAAWPLRGKLVLADAHGMARNGHGPSAGNLYLDHRALVALGLNVGDDVQLGGR
                     TLRIAAQIVQQPDGGTLVALAPRALMSLADARAAGLLGTGSRATHRLLLAGAPAEVHA
                     WRAWAERQALPQGAELITPERTQERMRSAFDRAGAFLHLTALLAALLAGVAIALSAQR
                     YARRKTPEVALLRALGTSRRRTLGLLLGTLAALAVPVTAIAVAATLGIGQIAWQFAGS
                     LFGALPTVLPIRPAL"
BASE COUNT          329 a          863 c          794 g          307 t
ORIGIN      
        1 gcaggcggtt gcgcccggac agcgaggtct cgccgctgat gctggcattg accacggtcc
       61 acgccggcac catcttggac aaccaggctt cgagcagacg cacccagccc tggtcgaccg
      121 cgatgttgtg cgcggccgac agggaatccc cgagcaccag caccgtgcgc gcgggcgccg
      181 ccgcctgcac cgcgccgaac gcgcccgcca gccacagcaa cccgatcagg aaccgacgca
      241 tgcgcgacac gcctccagtc atcctcgaag cccgcgatgt tagcaagtcg gtcatcggtc
      301 ccgagggcga gctggccatc ctcgccggcg tgaacctgac cgtcgcgacc ggcgaaagct
      361 tcgccatcgt cggcgcctcc ggttcgggca agaccacgct gctcggcctg ctggccggcc
      421 tggatacatc cagcagcggc cacgtgcagc tcgccggcca cgcactggaa acgctggacg
      481 aggaagcgcg cgccgacctg cgccggcggc tcgtcggctt cgtgttccag tcgttccacc
      541 tgctgccggc gctgtccgcc gaagagaacg tgatgctgcc gctcgaactc gaaggcgacg
      601 cgcaggcacg gcgcaaggca cacgacgcgc tcggcgcggt gggcctggat gcgcgccggc
      661 gccattaccc ggcacagctt tccggcggcg agcagcagcg cgtcgccatc gcgcgcgcct
      721 tcgtgcacgc accgcgcgtg ctgttcgccg acgagcccac cggcaacctc gaccagcgca
      781 ccggccacca catcgccgac ctcttgttcg cgctcaaccg cgaccaccac accacgctgg
      841 tgatggtgac ccacgaccac cagctcgctg cgcgctgcac gcgccacatc gaactgcgcg
      901 aagggcgggt ggtgacggcc gatgcggcgg tgagcgcatg agcgggcttc ccgcaacctt
      961 gtggggcggg gttcatcccg actccggtct gccgctggca cataccacaa cggtgggcgg
     1021 atgaacgcaa aagccgaagc ccccctcacc ccaaccctct cccccaacaa tgaagccgtt
     1081 gggggagagg gagacaagtg ctgcgccgcg gcatctgcac catgtccgcc caacgatgaa
     1141 gccgttgggg gagagggaga cgagcactac gccgcggcgc ccgcaccctg cccgcccgac
     1201 gatggagccg ctcggcgaga aggcacccaa ggcgcgggag cacgggcatg aacctgttgc
     1261 gcttgtcgct gcgcaacctg cgccgcgaat ggcggctgcc ggagctgcgc acgctggctg
     1321 gctcgctgct cctcgcggtg ctggcgctgg gcgtcgtcgc cacgcttgcg gcgcgggtcg
     1381 agaacggcat cctcgccagc gcggcggagc tgatcggcgg cgacgtcggc atctcggcac
     1441 cgcaggcgcc tccggctagg tttgccgacc gggcgacgcg caatcacctc gccatcagcc
     1501 gcaccgccgg cttccccagc gtggcgttcg ccggcgagcg cagccagttg ctcgacgtgc
     1561 aggcggtgga tgcggcgtgg ccgctgcgcg gcaagctggt gctggccgat gcgcacggca
     1621 tggcacgcaa cggtcacggc ccgtccgccg gcaacctgta tctcgatcac cgcgcgctgg
     1681 tcgcgcttgg gctcaacgtg ggcgacgacg tgcagcttgg cggccgcacg ctgcgcatcg
     1741 ccgcgcagat cgtgcagcag cccgacggcg gcaccctggt cgctctcgca ccgcgcgcgc
     1801 tgatgagcct ggccgatgcg cgcgccgccg gcctgctcgg taccggcagc cgcgccacgc
     1861 atcgcctgct gctcgccggt gcgcccgccg aggtgcacgc gtggcgcgca tgggcggagc
     1921 ggcaggcctt gccgcagggc gccgaactca tcaccccgga gcgcacgcag gagcggatgc
     1981 gctcggcgtt cgatcgcgcc ggtgcgttcc tgcacctgac cgcactgctc gccgccctgc
     2041 tcgccggcgt ggcgatcgcg ctgtccgcgc aacgctacgc gcggcgcaag acgcccgagg
     2101 tcgcgctgct gcgcgcgctg ggcacctcgc gccgacgcac gctggggctg ctgctcggca
     2161 cgctcgcggc gctcgccgtg ccggtcactg cgatcgcggt ggcggccacg ctgggcatcg
     2221 ggcagatcgc gtggcagttc gccggcagcc tgttcggcgc gctgccgacg gtgttgccga
     2281 tccggccggc gct
//
LOCUS       DASSVL010000383         4682 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_997494, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000383 DASSVL010000000
VERSION     DASSVL010000383.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 4682)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4682)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4682
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_997494"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..3556
                     /locus_tag="VFM52_06730"
     CDS             <1..3556
                     /locus_tag="VFM52_06730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007804864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HET8764898.1"
                     /translation="IGRRRPDRHDVEVLAGAGPEASYADALKLSADPADPGGGGPVGI
                     VLREGHVLTMTIDAPAFAPWREVATRHGFGAIIVAVASTRDTGQLALTAYARAGSPPF
                     GAEMLDWAQRLADELARFWDHQQLLERSLRLGRYRTAQRAIQHSLLAQPDPAAVYAAL
                     AHALVDIAGALAVDVFVAAEGEPMLQRVALVGSITGVMQQLPAPPCHADPAEALVPTL
                     AFMRASPVIRRHPDRVGHGGRAFNPLLRDYAGAVGCWPVFGRQRGATDKPGPSGVFVV
                     VASEGDAFDDDLCRLLDELADATGLALHQHAQRDALRQEKDRQTYLALHDDLTGLPNR
                     RALERHLEQVLRRADERGRQVAVGLLDLDDLKPINDRHGHAAGDHLLVEMARRFRRGL
                     RANDYLARLGGDEFVLVFEDLETGQEVDGLLERVDEALRQPLTLDDAAVSVGASLGVA
                     LYASGSGLSGEQLMRRADQAMYRIKARKRQRSRWWALVAADGVVDKSGELTLILPYGE
                     AAAEALAECHTEWMARLPAIVDGFCEQLRGHDGIAALLALLPAADLAPMHARLVNHLQ
                     GLLLPELTDATQRKHAYRAGVLYAACGLEEVWLLEVIEELRNTLATALGSMGRAGRRA
                     LAVLLQRLGMERQWQLESMRELQRKRVAVLAQLNALAWSAESYLALIQGTADILTAHP
                     EVLACSVGRPDGDGQLTYEAAAGHAFTRYLRALVAGQAAPIGVREARPEGQGPSGRAW
                     RSGAIQRCGHYGSDPTMALWSKAVLELGVVSSVSVPLCPTRHQPAAVLAVFSPYLGGF
                     RSEDQQAFIEQIRIVLELALVRLAPPRPGTELLPFIVRERWRASIATGALEMHYQPMV
                     RLADGRATEIEALARLHDIDGELLTPARFLPALDSDDLLALFCQGLSQAVACQRRLAE
                     QGALLDVSVNVPATALHDARYVDMVASAIRDGRCDPATLLLEILESSAEGEHVDRPVA
                     AGVQSLRALGVRLVEDDLGAGYSSLIRLRKWPFDRIKIDQAIVGQARTDPRGTLRFVR
                     QLIRIGYDMRLEVVVEGLETPALAEAARILGADFGQGYALAQPMPLAQLAEWMARRPT
                     PVPDAAPRTGLGALAAELRWEERFLALPDEPAYWKRHPEASCGPGMYLHGLAGGGSLH
                     AAHEAMHRAAEHGPADEIYREAHEAFLALLVQHVLAQP"
     gene            3707..>4682
                     /locus_tag="VFM52_06735"
     CDS             3707..>4682
                     /locus_tag="VFM52_06735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007509215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing phosphohydrolase"
                     /protein_id="HET8764899.1"
                     /translation="MTEPLIHPSQIRLGEPLPHDAFDRRGMLLLRRGHVVATAWQVEV
                     LLQNAVLAAGRAPPRREAPTAAPETPLSLALSARLLLRALLTTPPRRGFAGEVLGVVD
                     MLARACRANPDVALATILMHREDEYSIRHAVNVAIACQVVGAAMRMARARLASTVAAA
                     LTMNIGMLALQDALQAQAGPLDEAQRDGVRGHCERGVALLVEHGVEDPVWLAAVRDHH
                     ERPDGSGYPAGTVGAALDTPARLVGLADVYCARVSSRETRPAMAPNAAMRQLFLREGE
                     ATDEALARQLIKALGIYPPGTGVRLRNGRVAVVIERGMTGHRPLLALLT"
BASE COUNT          611 a         1619 c         1777 g          675 t
ORIGIN      
        1 gatcggtcgg cgcaggccgg accggcacga cgtcgaggtg ctcgccgggg ccggccccga
       61 ggcaagctat gccgacgcgt tgaagctcag cgccgatccg gccgacccgg gcggcggcgg
      121 cccggtgggt atcgtgctgc gcgaggggca tgtcctcacc atgaccatcg atgcgccggc
      181 gttcgcaccg tggcgcgagg ttgccacccg gcacggtttc ggcgcgatca tcgtcgccgt
      241 cgcctccacc cgcgataccg gccagctcgc gctcaccgcc tacgcgcgcg ccggcagccc
      301 gccgttcggc gcggagatgc tggactgggc gcagcgcctg gccgacgagc tggcgcgttt
      361 ctgggaccat cagcaactgc tcgaacgcag cctgcgtctg ggccgctatc gcacggcgca
      421 gcgtgcgatc cagcattcgc tgctggcgca gcccgatccc gcggccgtgt acgccgcgct
      481 ggcgcatgcg ctggtcgaca tcgccggagc gctggccgtg gacgtgttcg tcgcggcgga
      541 gggcgagccg atgctgcagc gggtggcgct ggtcggcagc atcaccgggg tgatgcagca
      601 gttgccggca ccgccgtgcc atgccgatcc ggccgaggcc ctggtgccca cgcttgcctt
      661 catgcgcgcc agcccggtga tccgccggca tccggaccgg gtcggccacg gcggccgcgc
      721 cttcaacccg ctgctgcgcg actacgccgg cgcggttggc tgctggccgg tgttcgggcg
      781 ccagcgcggg gcgaccgaca agccgggccc cagcggcgtg ttcgtggtgg tcgcgagcga
      841 gggggacgcg ttcgacgacg acctgtgccg cctgctcgac gaactggccg atgccaccgg
      901 cctcgcgctg caccagcacg cgcaacgcga cgcgctgcgc caggaaaagg atcgccagac
      961 ctacctcgcg ctgcacgacg acctgaccgg gctgcccaac cggcgcgcac tggaacgcca
     1021 tctcgaacag gtgctgcggc gcgccgacga gcgcggccgc caggtggccg tcggcctgct
     1081 cgacctggac gacctgaagc cgatcaacga tcgccacggc catgctgccg gcgaccatct
     1141 gctggtcgag atggcacgtc gtttccgtcg tggcctgcgc gccaacgatt acctggcgcg
     1201 gctggggggc gacgagttcg tgctggtatt cgaggatctc gagaccggac aggaggtgga
     1261 cggcctgctg gagcgcgtcg acgaggcatt gcgccagccg ctgacgctcg acgacgctgc
     1321 ggtgtcggtg ggcgccagcc tgggcgtggc gttgtacgcg agcggcagcg gcctcagcgg
     1381 cgaacagctg atgcggcgcg ccgaccaggc gatgtaccgg atcaaggccc gcaagcgcca
     1441 gcgttcgcgc tggtgggcgc tggtcgcggc cgacggcgtg gtggacaagt ccggcgagct
     1501 gaccttgatc ctgccgtatg gcgaagcggc cgccgaggcg ctggccgaat gccacaccga
     1561 gtggatggcg cgcctgccgg cgatcgtcga cggtttttgc gagcagttgc gcgggcatga
     1621 cggcatcgcg gcgctgctgg cgctgctgcc ggcggctgac ctggcgccca tgcacgcgcg
     1681 gctggtaaac catctgcagg gactgttgct gccggagctg accgatgcca cgcagcgcaa
     1741 gcacgcatac cgcgccggcg tgctgtatgc cgcgtgtggc ctggaggagg tctggctgct
     1801 ggaggtgatc gaggaactgc gcaacacgct ggccacggcg ctcggcagca tggggcgcgc
     1861 cggccggcgc gcgctcgcgg tgctgctgca gcgtctcggc atggagcgcc aatggcagct
     1921 ggaaagcatg cgcgagctgc agcgcaagcg ggtcgccgtg ctggcccagt tgaacgccct
     1981 ggcgtggtcg gcggaaagct acctcgcgtt gatccagggc accgccgaca tcctgaccgc
     2041 ccatccggag gtcctcgcct gttcggtggg gcgcccggac ggggacggcc agctcaccta
     2101 cgaggcggcg gccggccacg cgttcacccg ctacctgcgt gcgctggtcg ccggccaggc
     2161 ggcgccgatc ggcgtgcgcg aggcgcgccc ggagggccag gggccgagcg ggcgggcgtg
     2221 gcgctcgggg gcgatccagc gttgcggcca ttacggcagc gacccgacga tggccctgtg
     2281 gagcaaggcg gtgctggagc tgggagtggt gtccagcgtg tcggtgccgc tgtgcccgac
     2341 gcggcaccag ccagcggccg tgctggcggt attcagccct tatctcggcg gctttcgcag
     2401 cgaggatcag caggctttca tcgagcagat ccgcatcgtg ctggagctgg cgctggtgcg
     2461 tcttgcgccg ccgcggccgg gcaccgagct gctgccgttc atcgtgcgcg aacgctggcg
     2521 ggcgagcatc gccaccggcg cgctggagat gcattaccag ccgatggtgc gcctcgccga
     2581 cggccgcgcc accgaaatcg aggcgctggc ccgcctgcat gacatcgacg gcgagctgct
     2641 gaccccggca cgcttcctgc cggcgctgga cagcgacgac ctgctcgcgt tgttctgcca
     2701 ggggttgtcc caggcggtgg cgtgccagcg ccggctggcg gagcaggggg cgctgctcga
     2761 cgtgtcggtc aacgtcccgg ccaccgcgct gcacgatgcg cgttacgtcg acatggtggc
     2821 gagtgccatc cgcgatggcc gctgcgatcc ggccacgctg ctgctggaga tcctcgagtc
     2881 ctcggccgaa ggcgagcatg tcgatcggcc ggtcgccgcc ggagtgcagt cgctgcgcgc
     2941 gcttggcgtg cgcctcgtcg aggatgacct cggcgccggc tacagctccc tgatccgcct
     3001 gcgcaagtgg ccgttcgatc gcatcaagat cgaccaggcc atcgtcggcc aggcccgcac
     3061 cgacccgcgc ggcacgctgc gtttcgtgcg ccagctgatc cgcatcggct acgacatgcg
     3121 gctcgaagtg gtggtcgagg ggctggagac accggcgctg gccgaggccg cgcgcatcct
     3181 cggcgccgat tttggccagg gttacgcgct ggcgcagccg atgccgctgg cgcagctcgc
     3241 cgaatggatg gcgcggcgcc cgacgcccgt gcccgacgcc gccccgcgca ccggcctcgg
     3301 cgcgctggcg gccgagctgc gctgggagga acggttcctc gccttgccgg acgaaccggc
     3361 ctactggaag cgccaccccg aggcgtcttg cggcccgggc atgtacctgc acggactggc
     3421 cggcggcggc agcctgcacg ccgcacatga agccatgcat cgcgcggccg agcacgggcc
     3481 ggcggacgaa atctatcgcg aggcgcacga ggcgtttctc gcgttgctgg tgcagcacgt
     3541 gctggcccag ccgtagcggt ggcgggcgcg gttcggcatc atggtcgcca cgtcgccggg
     3601 cacggggagc ggggcgcggg cgcgttcggg gccgggattg ccggccgaac ggcgtccgtc
     3661 acgtgggtcc cgggttgaac cgtcgcgacg ccagatcgag gggagcgtga ccgaaccgct
     3721 gattcatccg tcgcagatcc ggctgggcga gccgttgccg cacgacgcgt tcgaccgccg
     3781 cgggatgctg ctgttgcggc gcggccacgt cgtggccacg gcatggcaag tggaagtgct
     3841 gctgcagaac gcagtgctgg ccgcaggccg ggcgccgccg cgtcgcgagg cgccgacggc
     3901 ggcaccggag acgccgctgt cgctggcgct gtcggcgcgc ctgctgctgc gcgcgttgct
     3961 gaccaccccg ccgcggcgcg gctttgccgg agaggtgctc ggcgtggtcg acatgctcgc
     4021 ccgggcctgc cgggccaatc cggacgtggc gctggcgacg atcctgatgc atcgcgagga
     4081 cgagtattcg atccgccatg cggtcaacgt ggcgattgcc tgccaggtgg tcggtgccgc
     4141 gatgcggatg gcgcgtgcgc gcctggcctc gacggtggcc gccgcgctca ccatgaacat
     4201 cggcatgctg gcgctgcagg acgccctgca ggcgcaggcg gggccgctcg acgaggccca
     4261 gcgcgacggc gtgcgcgggc actgcgaacg cggcgtggcg ctgctcgtcg agcacggcgt
     4321 cgaggatccg gtctggctgg ctgccgtacg cgatcaccac gagcgtcccg acggcagcgg
     4381 ctacccggcc ggcacggtgg gcgcggcgct cgatacgccg gcgcgcctgg tcgggttggc
     4441 cgacgtgtat tgcgcgcggg tgtcgagtcg cgagacccgg ccggcgatgg caccgaacgc
     4501 ggcgatgcgc cagttgttcc tgcgcgaggg agaggccacc gacgaagccc tggcgcgcca
     4561 gctcatcaag gcactcggca tctacccgcc cggcaccggc gtgcgcttgc gcaatggccg
     4621 ggtggcggtg gtgatcgagc gcggcatgac cgggcaccgg ccattgctgg cgctgctcac
     4681 cg
//
LOCUS       DASSVL010000384         3254 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_390295, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000384 DASSVL010000000
VERSION     DASSVL010000384.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3254)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3254)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3254
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_390295"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..180
                     /locus_tag="VFM52_06740"
     CDS             <1..180
                     /locus_tag="VFM52_06740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007508788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux transporter periplasmic adaptor subunit"
                     /protein_id="HET8764900.1"
                     /translation="HGAYLYQLDHGKARRVEVKLRHPAGDTVGVEGKLDPALPVIVQG
                     AYELDDGAAVRESKP"
     gene            192..>3254
                     /locus_tag="VFM52_06745"
     CDS             192..>3254
                     /locus_tag="VFM52_06745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007508791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HET8764901.1"
                     /translation="MTITGWLHRHRRSLLFLAFILALGGIASALKLPVSLFPDVSFPR
                     VRVTLDAGDQPADQMVVAVTRPVEEAIRRVRGVREVRSTTSRGSAEINVGFDWGADMG
                     RALLDVDAAIGEVLPRLPPGVDVEAIRLDPTVFPILAYSLSSDALTPTQLHDIAEFQL
                     RPLLSGITGVAQVDVQGGDIAEFHVDADATKLRAQGLTLADLDHAVASAATIQSLGRL
                     QDHYKLYLLLANNQPATAAALGDIVLRADAQGVVRVKDVATVGLDHQPQWVRTTADGH
                     DAVLMQVFQQPDGNSVQIAQDVKQRLADFERQAPRGLHIANWYDQTQLVLGAAASVRD
                     AIAIGIVLAGLVLFAFLRNARVILVALVVVPATLAITVLLLTVMHMSFNMMTLGGMAA
                     AVGLLIDDVIVMLEHIMRRLRDGSGPVRGRIAGAAWEFTRPLTGSSAATVVIFLPLAF
                     LTGVTGAFFKALSLTMASALVISYLLTWVVVPLLAEWLLDERHLAEHPPGRATQRLQR
                     GYEHVLDVVLKRPVLVLLGVVPLLLVGVLAYRQVGSGFMPKMDEGGFTLDYLSQPGTS
                     LDETDRLLQQLEQIIRTNPYVDTYSRRTGLQLGGGLTEANTGDIFVRLKNGARPSTST
                     VMEQIREEIVAKVPGLDVDVSQLMEDLIGDLTEVPQPIEIKLYGDNQAQLDVTAKKVA
                     AAIARVSGVAEVRNGINPAGDALDVRVDPVRAGLAGLDPVAVAQQVAGAVAGTVDARL
                     PQGPKTVGVRVWLPPAARAQVEQLAALPIRGADGRVLPLSALATIRAVQGQPEIDRDN
                     LKRMVAVTARIVGRDLGSTVADVKQVLAKPGLLPPGMYHELGGLYAQQRIAFHDLSLV
                     MLAAIALVFTLLLFLYESFRVALAIMTAPLLSMAAVFIGLWATGIELNISAMMGMTMI
                     VGIVTEIAIFYFTEMRDAEQSMPLHAALQHAGRYRMRPILMSTIAAILTLLPLALAIG
                     QGSQMQQPLAVAIIAGMLLQVPLVLLVMPVLYAVLMRKKSSGGHEPVPV"
BASE COUNT          475 a         1083 c         1166 g          530 t
ORIGIN      
        1 catggcgcct acctgtacca gctggaccac ggcaaggcgc gacgggtgga ggtgaagctg
       61 cgccatcccg cgggcgatac ggtgggcgtt gagggcaagc tcgacccggc gctgccggtg
      121 atcgtgcagg gcgcctacga actggatgac ggcgcggccg tgcgcgagag caagccgtga
      181 gtgcagcacc gatgacgatc accggctggc tgcaccggca tcggcggtca ctgctgttcc
      241 tcgccttcat cctggcgctc ggcggcatcg ccagtgcgct caagctgccg gtgtcgctgt
      301 ttcccgatgt gtcgtttccg cgcgtgcggg tgacgctgga tgccggcgac cagcccgccg
      361 accagatggt ggtggccgtc acccgaccgg tggaggaagc gatccgccgc gtgcgtggtg
      421 tgcgcgaggt gcgctcgacc accagccgcg gcagtgccga gatcaacgtc ggtttcgact
      481 ggggcgccga catgggccgc gcgctgctcg acgtggacgc cgcgatcggc gaggtgttgc
      541 cgcgcctgcc gccgggcgtc gacgtggagg cgatccggct cgacccgacg gtgttcccga
      601 tcctggccta cagcctcagt tccgacgcgc tcacgccgac ccagctgcac gacatcgccg
      661 agttccagct gcgcccgttg ctgtccggca tcaccggcgt ggcgcaggtg gatgtgcagg
      721 gcggcgacat cgccgagttc cacgtggacg cggatgccac gaagctgcgc gcgcagggcc
      781 tcaccctggc cgacctcgat cacgccgtgg ccagcgcggc caccatccag tcgcttggcc
      841 ggctgcagga ccattacaag ctttacctgc tgctggcgaa caaccagccg gcgacggcgg
      901 cggcgctggg cgacatcgtg ctgcgcgcgg acgcgcaggg cgtggtgcgc gtgaaggacg
      961 tcgccacggt cgggctcgat caccagccgc agtgggtgcg caccaccgcg gatggccacg
     1021 atgcggtgct gatgcaggta ttccagcaac ccgatggcaa cagcgtgcag atcgcgcagg
     1081 acgtgaagca gcgcctggcg gatttcgagc ggcaggcgcc gcgtggcctg cacatcgcga
     1141 actggtacga ccagacgcag ctggtgctgg gcgcggcggc cagcgtgcgc gatgcgatcg
     1201 cgatcggcat cgtgctcgcc gggctggtgt tgttcgcgtt cctgcgcaat gcgcgggtga
     1261 tcctggtggc gctggtcgtg gtgccggcca cgctggcgat caccgtgctg ctgctcaccg
     1321 tcatgcacat gagcttcaac atgatgacgc tcggcggcat ggcggccgcg gtcggactgc
     1381 tgatcgacga cgtgatcgtg atgctcgaac acatcatgcg ccggctgcgc gacggcagcg
     1441 gcccggtgcg cgggcgcatc gccggcgcag cgtgggaatt cacccgcccg ctcactggtt
     1501 cgagcgcggc cacggtggtg atcttcctgc cgctggcgtt cctcaccggc gtcaccggcg
     1561 cgttcttcaa ggcgttgagc ctgaccatgg ccagcgccct ggtgatctcc tacctgctga
     1621 cctgggtggt ggtgccgctg ctggccgagt ggctgctcga cgagcggcac ctggccgagc
     1681 acccgcctgg gcgcgccacg cagcgcctgc aacggggcta cgaacacgtg ctggacgtcg
     1741 tgctgaagcg gccggtgctg gtgctgctcg gcgtggtccc gctgctgctg gtcggcgtac
     1801 tggcctatcg ccaggtgggc agcggtttca tgccgaagat ggacgagggc ggcttcaccc
     1861 tggattacct ctcgcagccc ggcacctcgc tggacgagac cgaccgcctg ctgcagcaac
     1921 tcgaacagat catccgcacc aatccctacg tggacaccta ctcgcggcgc accggcctgc
     1981 agctgggcgg tggcctcacc gaggcgaaca ccggcgacat cttcgtgcgc ctgaagaatg
     2041 gcgcgcggcc gtccaccagc accgtgatgg agcagatccg cgaagagatc gtggccaagg
     2101 tgccgggcct ggacgtcgac gtttcccagc tgatggagga cctgatcggc gacctcaccg
     2161 aagtgccgca gccgatcgag atcaagctgt acggtgacaa ccaggcgcag ctggacgtca
     2221 ccgcgaagaa ggtggccgcg gcgatcgcca gggtcagcgg cgtagccgag gtgcgcaacg
     2281 gcatcaaccc ggcgggcgac gcgctcgacg tgcgtgtgga cccggtgcgc gccgggttgg
     2341 ccgggctcga tccggtggcg gtggcgcagc aggttgcggg ggcggtcgcc ggcaccgtcg
     2401 atgcacggct gccgcaggga ccgaagacgg tcggcgtgcg cgtgtggctg ccgccggcgg
     2461 cacgcgccca ggtggaacag ctggcggcgc tgccgatccg cggcgccgat ggccgcgtgc
     2521 tgccgttgtc ggcgctggcc acgatccgcg ccgtgcaggg ccagcccgag atcgaccgcg
     2581 acaacctgaa gcgcatggtg gcggtgaccg cgcgcatcgt cggccgcgac ctcggttcga
     2641 ccgtggccga cgtcaagcag gtgctggcca agccgggcct gctgccgccc ggcatgtacc
     2701 acgagctggg cgggctctac gcgcagcagc ggatcgcgtt ccacgacctg agcctggtga
     2761 tgctggccgc gatcgcgctg gtgttcaccc tgctgctgtt tctctacgag agcttccgcg
     2821 tcgcgctggc gatcatgacc gcaccgctgc tgtcgatggc ggcggtgttc atcgggctgt
     2881 gggccaccgg catcgagctc aatatctcgg cgatgatggg catgacgatg atcgtcggca
     2941 tcgtcaccga gatcgcgatc ttctacttca ccgaaatgcg cgatgccgag cagagcatgc
     3001 cgctgcatgc cgccttgcag cacgccggcc gctaccgcat gcggccgatc ctgatgtcca
     3061 ccattgccgc catcctcacc ctgctgccgc tggcgctggc gatcggccag ggctcgcaga
     3121 tgcagcagcc gctggcggtg gcgatcatcg caggcatgtt gctgcaggtg ccgctggtgc
     3181 tgctggtgat gccggtgttg tatgcggtgc tgatgcgaaa gaaatcgtca ggcggccacg
     3241 aacctgtccc tgtt
//
LOCUS       DASSVL010000385         2057 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1011709,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000385 DASSVL010000000
VERSION     DASSVL010000385.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2057)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2057)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2057
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1011709"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..936)
                     /gene="hisC"
                     /locus_tag="VFM52_06750"
     CDS             complement(<1..936)
                     /gene="hisC"
                     /locus_tag="VFM52_06750"
                     /EC_number="2.6.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007513000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004400 - histidinol-phosphate
                     transaminase activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol-phosphate transaminase"
                     /protein_id="HET8764902.1"
                     /translation="MNVLDLARPDIRALTPYSSARMEASGGAVLLNANESAWPPTGDA
                     GIGCNRYPEPQPPELVSALARLYGVRPEQLLVGRGSDEAIDLLMRAFCAAGRDAIVVQ
                     PPTFGMYAVSAHIQGAAVIAVPLGADFALDVEATLAAVTPAVKLVFVCSPNNPTGTQV
                     PRAALERLAQGLAGRALLVVDEAYVEFADEGSLADALDRFDHLVVLRTLSKAWALAGA
                     RIGCLLGHPDIVTLLRRIMAPYPLPRPSVAAALLALSGWGQTNARARVALVRSERARI
                     AAALTRIRGVRAVLPSQANFLAARFADAAGAFARLS"
     gene            complement(933..>2057)
                     /gene="hisD"
                     /locus_tag="VFM52_06755"
     CDS             complement(933..>2057)
                     /gene="hisD"
                     /locus_tag="VFM52_06755"
                     /EC_number="1.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019466658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004399 - histidinol dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol dehydrogenase"
                     /protein_id="HET8764903.1"
                     /translation="ALQVTAREFAEAEAALDESLKAAIREAITRIEAWHRAAVLQPVA
                     ADTAPGVRIERMLRPVGRVGLYVPAGSAPLPSTAIMLGVPARIAGCPQVVLCSPARAD
                     GRCDAAVLYAAQLTGVHQVFKVGGAQAIAAMAYGTASVPKCDKLFGPGNAWVTEAKLQ
                     VSADPDGAAIDMPAGPSEVLVIADAEANPVFVAADLLSQAEHGPDSQVILLSPSAALL
                     DAAAAEVERQCSELPRVAIVRQSLARSRLILVDSLAQAVEVSNRYAPEHAIIQVKDPR
                     ALLPAIQSAGSIFLGQWACESVGDYCSGSNHVLPTYGHARSHSGVSVASFQKQITVQE
                     LSADGLRTIGPCTATLAAAEQLDAHRRAVTLRLAALEQTA"
BASE COUNT          307 a          752 c          721 g          277 t
ORIGIN      
        1 ggacaggcgc gcgaaggcgc ccgcggcatc ggcaaatcgt gcggcaagaa aattggcttg
       61 cgacggcaac accgcgcgca cgccccggat acgcgtcagc gcagccgcga tccgcgcacg
      121 ctcgctgcgc accagcgcca cccgcgcgcg cgcgttggtc tggccccagc cggacagcgc
      181 cagcaacgcc gccgccacgc tcggccgcgg caaggggtac ggcgccatga tccgccgcag
      241 caaggtcacg atatccggat ggccgagcag gcagccgatg cgcgcgccgg ccagcgccca
      301 tgccttggac agcgtgcgca acaccacgag atgatcgaag cggtcgagcg cgtcggccag
      361 gctgccctcg tcggcaaatt cgacataggc ttcgtcgacc accagcaagg cgcggcccgc
      421 gagcccttgc gccaggcgtt cgagcgccgc gcgcggcacc tgcgtgccgg tcgggttgtt
      481 cggcgagcac acgaatacca gcttcaccgc cggcgtcacc gcggccagcg tcgcttccac
      541 gtcgagcgcg aaatccgcgc ccagcggcac cgcgatcacc gcggcgccct ggatgtgcgc
      601 gctcaccgcg tacatgccga aggtcggcgg ctgcaccacg atcgcgtccc ggccggccgc
      661 gcagaacgcg cgcatcagga ggtcgatcgc ctcgtcgctg ccgcgaccga ccaggagttg
      721 ttccgggcgc acgccataca gtcgcgccag cgcggagacc agttccggcg gctgcggctc
      781 cggataccgg ttgcagccga tgccggcatc gccagtcggc ggccacgcgg attcgttggc
      841 gttgagcagc accgcgccgc cgctggcttc catgcgcgcc gaggaatacg gcgtgagcgc
      901 gcggatgtcc ggccgcgcga gatcgagcac gttcatgcgg tttgctccag ggcggcgagg
      961 cgcagtgtca ccgcgcggcg gtgcgcgtcc agttgctcgg cggccgccaa cgtcgccgtg
     1021 catgggccga tcgtgcgcag gccatcggcg ctcagctcct gcaccgtgat ctgcttctgg
     1081 aagcttgcca ccgacacgcc gctgtggctg cgcgcgtggc cataggtcgg cagcacgtgg
     1141 ttgctgccgc tgcagtagtc gccgacggac tcgcacgccc actggccgag gaagatcgag
     1201 ccggcgctct ggatggcggg cagcagcgcg cgcgggtcct tcacctggat gatcgcatgc
     1261 tccggcgcgt agcggttgct gacttccacc gcctgcgcga gcgagtccac caggatcaag
     1321 cggctgcgtg cgagcgactg gcgcacgatc gcgacgcgcg gcaattcgct gcactggcgc
     1381 tcgacttccg ctgccgccgc atcgagcagc gcggccgacg ggctgagcag gatcacctgc
     1441 gaatccgggc cgtgctcggc ctgcgacaag agatcggcgg cgacgaacac cgggttggcc
     1501 tcggcgtcgg cgatcaccag cacttcggac gggcctgccg gcatgtcgat cgccgcgccg
     1561 tcggggtcgg cggaaacctg cagcttcgct tccgtcaccc acgcgttgcc ggggccgaac
     1621 agcttgtcgc acttgggcac gctcgcggtg ccgtaggcca tcgcggcaat cgcctgcgca
     1681 ccgcccacct tgaacacctg gtgcacgccg gtgagctgcg cggcgtacag cactgcggca
     1741 tcgcaacggc catcggcgcg ggcgggcgaa cacagcacca cttgcgggca gccggcaatg
     1801 cgcgccggca cgcccagcat gatcgccgtc gacggcagcg gcgcgctgcc cgccggcacg
     1861 tacaggccga cgcggccgac tggccgcagc atgcgttcga tgcgcacgcc gggcgcggta
     1921 tcggccgcca ccggctgcag taccgcggcg cggtgccagg cttcgatgcg cgtgatcgct
     1981 tcgcggatcg ccgccttgag cgattcatcg agcgccgcct cggcttcggc gaactcgcgc
     2041 gcggtgacct gcaaggc
//
LOCUS       DASSVL010000386         3581 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_588012, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000386 DASSVL010000000
VERSION     DASSVL010000386.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3581)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3581)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3581
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_588012"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1119
                     /locus_tag="VFM52_06760"
     CDS             <1..1119
                     /locus_tag="VFM52_06760"
                     /inference="COORDINATES: protein motif:HMM:NF015316.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein transport protein"
                     /protein_id="HET8764904.1"
                     /translation="NVSTQFHGSGHDAFGRPLSGGDGGNGGGVYGVPSISFIAPIAQN
                     WRLGLGLNAPFGLQTQYDANWVGRYESIKSSVKSMDVTGSIAWAVTPEFSLGFSVIAQ
                     KTTINLTNAINFGTVMIAPVSLGGFGLPPPTFMPQSADGMAQVRGSNWKWGWQLGAEW
                     KPTSQDTLALNYHAKINHNIDGQAHFTVPASVQYVLSQPGVPPVFQDGAASGSFATPA
                     MASLSYWHKTLGPVSWGAEVSWTGWSSFSHLAIDFANPYQPDINQYYGWKNTWFGSVG
                     MDYKLSDQWTLRGGLAFDQTPTRDFSRDPRIPDGSRRWVSFGVGYAPSDNIQLNLGYT
                     HLFVSNGNVNNVSSTLDTLVGSFDNSGDLLGISMQYKF"
     gene            complement(1262..3274)
                     /locus_tag="VFM52_06765"
     CDS             complement(1262..3274)
                     /locus_tag="VFM52_06765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008436910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="multicopper oxidase domain-containing protein"
                     /protein_id="HET8764905.1"
                     /translation="MSEESGHEVSPRTLPAMARTALRVAFGLIWVVNAALTWTNEFAV
                     HYVGYLHNAAQGQSAWSGWWFSLWIAVVTPHAMLFVWATRIIETALALALVFGFARKT
                     TYIAGALFSLLVWSTAEGFGGPYAVGATNMGAGIVYVLVFIALLVINSRSGPSPYSLD
                     FYIEKRCSGWRKFSELSGASQPRPAQPVSWGVQAPILIGIAVLVFFLVAGLHSSLNVK
                     GASPTAAAAAVSPLSLASSEPVKHPRDARLPPLTDGPSVNVDISSTDGKVEIASGVQY
                     QAWTFGAMVPGPTVHVRQGQTVNVTYTNHGTMQHSIDFHSALTPPNLSFAEVDPGKSI
                     TFSFVAKVPGAFVYHCGTQPVLLHMANGMYGAIIVDPATPLPPAAESYVIVQGEWYTQ
                     QVAGNLMGANYQKMLDERPDEVVFNGIAFQYRDHPLPVTPGKRVRIYFVNAGPSLWSS
                     FHVIGEIFDAVYPDGDMTHALTGVSTYSVGPGAGAIFDLVIQAPGKYPFVDHSMAHMT
                     IGAQGILAVGTPSEIAAKVPAITSAATPAPNAAPAASTPVAAAATGPYKFDPAKGSAI
                     YTANCAACHQATGTGLPGAFPPLKDNPVVNDPDPAKQITTILHGLQGENVMGTVYPSA
                     MPPFAASLSDADIADVANHERTSWGNQGKQVTAAQVQALRAKGGGK"
BASE COUNT          600 a         1136 c         1214 g          631 t
ORIGIN      
        1 aacgtcagca cccaattcca cggcagcggc cacgatgcgt tcggccggcc gctgtcgggc
       61 ggcgacggcg gcaacggtgg cggcgtgtac ggcgtgccgt cgatcagctt catcgcgccg
      121 attgcgcaga actggcgcct gggcctcggc ctcaatgcgc cgttcggcct gcagacgcaa
      181 tacgacgcga actgggtcgg ccgctacgaa tcgatcaagt ccagcgtgaa gtcgatggac
      241 gtcacgggtt cgatcgcgtg ggcggtgacg cccgaattct cgctgggctt ttcggtgatc
      301 gcgcaaaaga ccaccatcaa cctgaccaac gccatcaact tcggtacggt gatgatcgcg
      361 ccggtatcgc tgggtggctt tggcctgccg ccgccgacgt tcatgccgca atccgccgat
      421 ggcatggccc aggtgcgtgg cagcaactgg aagtggggct ggcagctcgg cgccgaatgg
      481 aagccgacct cgcaggacac cctcgcgctg aactaccacg ccaagatcaa ccacaacatc
      541 gacggccagg cgcacttcac ggtgccggcg agcgtgcagt atgtgttgtc gcagccgggc
      601 gtgccgccgg tgttccagga cggcgccgcc agcggctcgt tcgccacgcc ggcgatggca
      661 tcgttgagct actggcacaa gacgcttggc ccggtgtcct ggggcgccga ggtcagctgg
      721 accggctgga gttcgttcag ccacctggcg atcgatttcg ccaacccgta ccagcccgac
      781 atcaaccagt actacggctg gaaaaatacc tggttcggct cggtcggcat ggactacaag
      841 ctgagcgacc aatggacgtt gcgtggcggc ctggctttcg accagacccc gacgcgggat
      901 ttctcgcgcg atccgcgcat ccccgacggc agccgccgct gggtctcgtt cggcgtcggc
      961 tatgcgccga gcgacaacat ccagctcaat ctcggctata cgcacctgtt cgtcagcaat
     1021 ggcaacgtca acaacgtcag ctcgaccctc gacaccctgg tgggcagctt cgacaactcg
     1081 ggcgatctgc tcggcatttc gatgcagtac aagttctgac gctcacgcgt caggcgcaaa
     1141 cgaaaccccg ccgcgaggcg gggttttttg ttggctggcg actggatgct ggaggtggtg
     1201 agccagcagc gaggtactgg cagcccgccg cgcgataccc gatcgcgccg ggtggaattc
     1261 gctacttgcc accgcccttg gcgcgcagcg cctgtacctg cgcggccgtg acttgcttgc
     1321 cctggttgcc ccacgacgtg cgttcgtgat tggcgacgtc ggcgatgtcg gcgtcactga
     1381 gcgaggccgc gaagggcggc atcgcgcttg ggtacacggt gcccatcacg ttttcgcctt
     1441 gcaggccgtg caggatcgtg gtgatctgct tggccgggtc ggggtcgttg acgaccgggt
     1501 tgtccttcag cggcgggaac gcgccgggca ggccggtacc ggtggcctgg tggcacgctg
     1561 cacaattggc cgtatagatg gctgaaccct tggccggatc gaacttgtaa ggccccgtcg
     1621 cggcggccgc gaccggtgtg cttgcagcgg gtgccgcgtt cggcgctggc gtggcagcgc
     1681 tggtgatcgc gggcaccttg gcggcgattt cgctcggcgt gccgaccgcg aggatgccct
     1741 gcgcgccaat ggtcatgtgc gccatcgagt gatcgacgaa gggatatttg ccgggggcct
     1801 ggatgacgag gtcgaagatc gcccccgcgc cgggtccgac gctgtaggtc gacacgccgg
     1861 tgagcgcgtg cgtcatgtcg ccatcgggat acaccgcgtc gaagatctcg ccgatcacat
     1921 ggaatgaaga ccacaggctg gggccggcgt tgacgaagta gatgcggacg cgcttgccgg
     1981 gcgtgaccgg caacgggtgg tcgcggtact ggaaggcgat gccgttgaag accacttcat
     2041 cggggcgctc gtccagcatc ttctggtagt tcgcgcccat gagattgccc gcgacctgct
     2101 gcgtgtacca ctcgccttgc acgatgacgt agctttcggc agccggcggc agcggcgttg
     2161 ccggatcgac gatgatcgcg ccgtacatgc cgttggccat gtgcagcagc accggctgtg
     2221 tgccgcagtg gtagacgaac gcccccggca ccttggcgac aaacgagaag gtgatgctct
     2281 tgcccgggtc gacttccgca aagctcaggt tgggcggcgt cagcgccgag tggaagtcga
     2341 tcgagtgctg catcgtgccg tggttggtgt aggtgacgtt gaccgtttgg ccctggcgga
     2401 cgtgaaccgt cggtccaggc accatcgcgc cgaacgtcca tgcctgatac tgcacgccgc
     2461 tcgcgatttc gaccttgcca tcggtgctgc tgatgtcaac gttgacgctg ggcccgtcgg
     2521 tcagcggcgg caggcgcgcg tcgcgcgggt gcttgaccgg ttcgctggat gcgagtgaca
     2581 gtggcgatac ggcggccgcc gccgcggtcg gcgaagcgcc ttttacgttc aggctgctgt
     2641 gcaggccggc gaccaggaaa aacaccagca ccgcgatgcc gatcaggatc ggcgcctgca
     2701 cgccccacga caccggctgc gccgggcgcg gctgcgaggc gccgctcagc tcggagaatt
     2761 tacgccaacc actgcagcgc ttctcgatat agaaatcgag gctgtacggg ctcgggcccg
     2821 agcggctgtt gatgaccagc agggcgatga acaccagcac atacacgatg ccggccccca
     2881 tgttggtggc gccgaccgcg tacggaccgc cgaagccctc ggcggtgctc cacaccaaaa
     2941 ggctgaagag cgcgccggcg atgtaggtgg tcttgcgggc aaagccgaac accaacgcca
     3001 gcgcgagtgc ggtttcgatg atgcgggtgg cccacacgaa cagcatcgcg tgcggcgtca
     3061 ccaccgcgat ccacaggctg aaccaccagc ccgaccacgc cgactggccc tgcgccgcgt
     3121 tgtgcaggta accgacgtag tggacggcga attcgttggt ccaagtcaat gcggcgttga
     3181 cgacccagat caggccgaag gcgacgcgga gcgcggtgcg cgccatggcg ggcagggtac
     3241 gcggggagac ttcgtgaccg gattcttccg acatgcgatg tacctcgatg gacttggtag
     3301 ggcgttccgg gccgcggcgg cccgcgcgtg caacccgttg cagccggagt ttatcctctc
     3361 gcgcatggga ccggggtgac gccggtcagt cgcgccggcg ccgcgcgtgg ttcggcgcac
     3421 aaattgagac gccgctcggc acacacggag tgcttacgaa acgatattct cgcaaccgct
     3481 gtgttccgag agttttgcta accgatcttg attcggcagt tcgaagttca acgctgctgc
     3541 gcgctacccg gcaattcccg cgccgtttcc gtgcacagcc t
//
LOCUS       DASSVL010000387         2385 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1124540,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000387 DASSVL010000000
VERSION     DASSVL010000387.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2385)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2385)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2385
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1124540"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1985
                     /locus_tag="VFM52_06770"
     CDS             <1..1985
                     /locus_tag="VFM52_06770"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HET8764906.1"
                     /translation="CNERVLQGLHRRRDEIVGHTDLELFGPGRAAEIRELDARTTREG
                     RRQTGLLALGDGADDQRQLQIINAPLRDEAGHIYGTLGTGRDVTDEARTEAELRLAAA
                     AFQIQEALLVLDGTHCIRRVNQAFEALTGFAAADVVGKDASFLRSGHHDPAFFTQLWA
                     RVETEGYWQDEYWVRVKHGRPRVVRMAISAVHGDGGAVTHYLASMVDLTAEREAHASV
                     DHMTFFDPLTDLPNRHYLHGRLRQVLDDPDAAGDALLILDLDHFKRVNDLRGHAAGDW
                     LLTQVAQRLRRALDADGMLSRFGGGTFAVLQGGVAPGARSAAETAQRCAEHLRQVLHA
                     PFPLGNGAPVTVTASIGWTVLVPGAGTPDSVLKEAELAMYEAKASGRDQARGYTPAMQ
                     AQLERNEALVHDLRTAIADDTLALHLQAQTDRDGCIVGAEGLLRWTRPCGEQVPPGVF
                     IPLAEENGLIVVLGNWVLQRACELLAQWAGAPATRDLALAVNVSARQFARPDFVDTVR
                     AVVATHGVDPSRLKLEVTESAILDDLDEATAKLRQLRALGMRISLDDFGTGYSSLAYL
                     SRLPLDQLKIDQSFVARLPDSPSDAMVARTIIGMGRGLGMEVIAEGVETSAQHAFLMS
                     KGCNAFQGFLISMPVSAPAFEALLARQPVVTSPAGN"
     gene            complement(1963..>2385)
                     /locus_tag="VFM52_06775"
     CDS             complement(1963..>2385)
                     /locus_tag="VFM52_06775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007512722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translocation/assembly module TamB
                     domain-containing protein"
                     /protein_id="HET8764907.1"
                     /translation="GTARKPVLTVFSQPPMEQSDALAYLVTGKPLSQVSSGEGDMLGA
                     AAQALGSAAGNLLAKRIGSQLGVDDIGVASSEALGGNSAFTVGKYLSPRLYLSYGVGL
                     FEPGEVVTLRYRLSHRWHFEAQSATEFNRASLNYRLEK"
BASE COUNT          347 a          833 c          864 g          341 t
ORIGIN      
        1 actgcaacga acgcgtgctg cagggcctgc accggcggcg cgacgagatc gtcgggcaca
       61 ccgacctcga attgttcggc cccgggcgcg cggcggagat ccgcgaactg gacgcacgca
      121 ccacccggga ggggcgacgc cagacgggct tgctggccct cggcgacggt gcggacgacc
      181 agcgccagct gcagatcatc aacgcgccac tgcgcgatga agcgggtcat atctacggca
      241 cgctcggtac cggacgcgac gtcaccgacg aggcacgcac cgaggccgag ttgcggctgg
      301 ccgcggccgc gttccagatc caggaggcgc tgctggtgct ggacggcacc cactgcatcc
      361 ggcgcgtcaa ccaggcgttc gaggcgctca ccgggttcgc ggccgccgac gtcgtcggca
      421 aggatgcgtc gttccttcgc tccggccatc acgatccggc gttcttcacc cagttgtggg
      481 ccagggtgga aaccgagggc tactggcagg acgagtactg ggtgcgggtg aaacacggtc
      541 gcccgcgggt ggtgcgcatg gcgatctcgg cggtgcacgg cgatggcggc gccgtgaccc
      601 actacctcgc ctcgatggtc gacctgaccg ccgagcgcga agcgcacgcc agcgtcgacc
      661 acatgacgtt tttcgacccg ctcaccgact tgcccaaccg gcactacctg cacgggcgcc
      721 tgcgccaggt gctggacgac ccggacgccg ccggggacgc gctgctcatc ctcgacctgg
      781 accacttcaa gcgggtgaac gacctgcgcg ggcatgccgc cggcgactgg ctgctgaccc
      841 aggtggcgca gcgcctgcgc cgcgcgctgg atgccgacgg catgctcagc cgcttcggcg
      901 gcggcacgtt cgcggtgctg cagggcggcg tcgcgccggg ggcgcggtcc gccgcggaaa
      961 ctgcgcagcg ctgcgccgag cacctgcgcc aggttctgca cgcgccgttc ccgctgggca
     1021 acggtgcgcc ggtgacggtg accgccagca tcggctggac cgtgctggtg cccggcgccg
     1081 gcacgcccga ttcggtgctc aaggaggccg agctggcgat gtacgaggcc aaggccagcg
     1141 gccgtgacca ggcgcgcggc tacaccccgg ccatgcaggc ccagctcgaa cgcaacgagg
     1201 cgctggtgca cgatttgcgc accgcgatcg cggacgacac gctggccctg cacctgcagg
     1261 cgcagaccga tcgcgacgga tgcatcgtcg gcgccgaggg cctgctgcgc tggacccgcc
     1321 cctgcggcga acaggtgccg cccggcgtgt tcattccgct ggcggaggag aacgggctga
     1381 tcgtggtgct gggcaactgg gtgctgcagc gcgcctgcga gctgctggcg cagtgggccg
     1441 gggcgccggc cacgcgcgac ctggcgctgg cggtgaacgt cagtgcgcgg cagttcgcgc
     1501 gcccggactt cgtcgacacc gtgcgcgccg tggtggcgac gcacggcgtc gacccgtcgc
     1561 ggctgaaact ggaagtgacc gagtcggcga tcctcgacga cctcgacgag gcgaccgcca
     1621 agctccgcca gctgcgcgcg ctcggcatgc gcatctcgct cgacgacttc ggcaccgggt
     1681 attcctcgct ggcgtacctg tcgcggctgc cgctggacca gctcaagatc gaccagtcgt
     1741 tcgtggcccg cctgccggac agcccgagcg atgcgatggt ggcgcgcacc atcatcggca
     1801 tgggccgcgg gctgggcatg gaggtgatcg ccgaaggcgt ggagaccagc gcgcagcacg
     1861 cgttcctgat gagcaagggc tgcaacgcat tccagggttt cctgatctcc atgccggttt
     1921 cggcgccggc gttcgaggcg ctgctggcgc gccagcccgt ggtcacttct ccagccggta
     1981 attgaggctg gcgcggttga attccgtggc gctctgcgcc tcgaagtgcc aacggtggct
     2041 gagccggtag cgcagggtca ccacctcgcc gggctcgaac aggccgacgc cgtagctcag
     2101 gtacagccgc ggcgacaggt acttgccgac ggtgaacgcc gagttgccgc ccagggcctc
     2161 gctgctggcc acgccgatgt cgtccacccc gagctggctg ccgatgcgct tggcgagcag
     2221 gttgccggcg gccgagccga gcgcctgcgc ggcggcaccg agcatgtcgc cctcgccgct
     2281 gctcacctgc gacaagggct tgccggtgac gaggtaggcg agcgcgtcgg actgttccat
     2341 cggcggctgg gaaaacaccg tcagcaccgg cttgcgcgcg gtgcc
//
LOCUS       DASSVL010000388         2626 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1393279,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000388 DASSVL010000000
VERSION     DASSVL010000388.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2626)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2626)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2626
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1393279"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..294)
                     /locus_tag="VFM52_06780"
     CDS             complement(<1..294)
                     /locus_tag="VFM52_06780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007810305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HET8764908.1"
                     /translation="MKVSLIGAALLALACLLPAYGADVREQTYSVGADVDAQGRVTAT
                     QFEDGVPASVAKLLGAAVEQWRFKPATADGQPVPAHTFISVKLLATPNAQGQYN"
     gene            494..>2626
                     /locus_tag="VFM52_06785"
     CDS             494..>2626
                     /locus_tag="VFM52_06785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007510263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HET8764909.1"
                     /translation="MRRLLLAGLLALAVAPVAAQTAPAASAPLDLETIMANPDWIGHP
                     VESPYWSVDGSSLYYSLKRDGSSVRDLYRVAAAGGAPTRLDDADLAGADGPAVYDRAH
                     RRAAFILHGDVFVTDLASGQRTQVTRSPARESAPQFSADGRAVQFRDGLTWYRHDLAS
                     GVTTPVAVLKFADDPQAKQPDALARHQLDLFSTLRTIKADRDAVRERDKALDAADPGR
                     APAPFWLGDKIRMIDSSLSPDGRWLLLVTVPAASTRGAPGDVIHYVTDSGYTEVQHAR
                     SYVGRNDPAPQSLLLLDLTAHQSYPVPTDTLPGIKDDPLKALRDKAIAKLTADGHADE
                     AKALKAPDVRPVTITDEEDTGGGGIAWNEDGSAVAVQLRAVDNKDRWLATVDLAKHAL
                     VIQDRLHDDAWINWNFNDFGWLKGGRTLWFLSEATGYSQLYVKPLDGKAKALTRGNFE
                     VSHPQPSPDGKWFYLRTNETAPYSYDVYRVPADGGALTRLTSFQGMDGFVLSPDGSHL
                     AVLHSAPYVLPQLAVLNADGSAPRELTNTTAPAFTAHAWIAPQIVGVPSSHGAGTIWA
                     KYYGPVHDDGAPRPAVVFVHGAGYLQDVTLGWSNYFREQMFHNLLVQQGYVVLDMDYR
                     ASEGYGRAWRTAIYRQMGHPELEDLLDGKAWLVRNHHVDPRRVGIYGGSYGGFMTEMA
                     LLRAPGEFAAGAALRAPSDWVTYNHGYTS"
BASE COUNT          407 a          966 c          884 g          369 t
ORIGIN      
        1 gttgtattgc ccctgggcat tcggcgtcgc cagcagcttc accgagatga aggtgtgcgc
       61 cggcaccggt tggccatccg cggtggccgg cttgaaccgc cactgctcaa cggcggcgcc
      121 cagcagcttg gccaccgatg ccggcacgcc gtcctcgaac tgggtggcag tgacgcgccc
      181 ctgtgcatcc acgtccgcac ccaccgaata cgtctgttcg cgcacatcgg cgccgtacgc
      241 cggcaacagg caagcgagtg cgagcaaggc cgcaccgatc aggctgactt tcattgactt
      301 cccccatcgt gcgccggcgt ccccacgtcg cgcttcgcgg cagcatgccg caacgccgcg
      361 ggcggctcaa tcgcaaaccg gtggatgccg cgaacgcaac cgtcgcgagt tccgccgcgg
      421 tccctgacct atggcgcttg cccacgcgtg ccgcctcgct atgctgcggg gctttacgtt
      481 cgtggagcgc accatgcgtc gactgttgct ggccggtctg ctggccctcg ccgtggcccc
      541 cgtcgcggcc cagaccgcgc cggcggcgag cgccccgctc gacctggaaa ccatcatggc
      601 gaacccggac tggatcgggc atccggtcga gtcgccgtac tggagcgtgg acggcagcag
      661 cctctactac tcgctgaagc gcgacggcag cagcgtgcgc gacctgtatc gcgtcgccgc
      721 cgcgggcggc gcgccgacgc ggctggatga cgccgacctg gctggcgccg atggcccggc
      781 ggtctacgat cgcgcgcatc ggcgcgcggc gttcatcctg cacggcgacg tgttcgtcac
      841 cgacctcgcg agcggccagc gcacccaggt cacgcgcagc ccggcgcggg aatccgcgcc
      901 gcagttctcg gccgatgggc gcgcggtgca gttccgcgac ggcctcacgt ggtatcgcca
      961 cgacctcgcc agcggcgtca ccacgccggt ggccgtgctg aagttcgccg acgatccgca
     1021 ggcgaagcag cccgatgcgc tcgcgcgcca ccagctcgac ctgttcagca cgctgcgcac
     1081 gatcaaggcc gaccgcgacg ccgtgcgcga gcgcgacaag gcgctggacg ccgccgaccc
     1141 cggccgtgcg ccggcgccgt tctggctcgg cgacaagatc cgcatgatcg acagctcgct
     1201 gtcaccggac ggtcgctggc tgctgctggt gacggtgccg gcggcgtcca cgcgcggcgc
     1261 gccgggcgac gtcatccact acgtcaccga ttccggctac accgaggtgc agcacgcgcg
     1321 cagctacgtc ggccgcaacg acccggcgcc gcagtcgctg ctgctgctcg acctcaccgc
     1381 gcaccagagc tacccggtgc cgaccgacac cctgcccggc atcaaggacg acccgttgaa
     1441 ggcgctgcgc gacaaggcga tcgccaagct caccgcggat ggccacgccg acgaggcgaa
     1501 ggcgctcaag gcgccggacg tgcggccggt gacgatcacc gacgaggaag acacgggcgg
     1561 tggcggcatc gcgtggaacg aggatggcag cgcggtggcc gtgcagctgc gcgcggtcga
     1621 caacaaggat cgctggctcg ccaccgtcga cctggcgaag cacgcgctgg tgatccagga
     1681 ccgcctgcac gacgacgcat ggatcaactg gaacttcaac gatttcggct ggctcaaggg
     1741 cggccgcacg ctgtggttcc tgtccgaggc gacgggctac tcgcagctct acgtcaagcc
     1801 gctcgacggc aaggcgaagg cgctgacccg cggcaacttc gaggtgagcc acccgcagcc
     1861 gagcccggac ggcaagtggt tctacctgcg caccaacgag actgcgccat acagctacga
     1921 cgtataccgc gtgcccgccg atggcggcgc actgacgcgc ctcaccagct tccagggcat
     1981 ggacggcttc gtgctgtcgc ccgacggcag ccacctcgcg gtgctgcatt ccgcgcccta
     2041 cgtgctgccg cagcttgccg tgctcaacgc tgacggcagc gcgccgcgcg agctgaccaa
     2101 caccaccgcg ccggcgttca ccgcgcatgc gtggatcgcg ccgcagatcg tcggcgtgcc
     2161 gtccagccac ggcgcgggca cgatctgggc gaagtactac ggccccgtgc acgacgacgg
     2221 cgcgccgcgc ccggcggtgg tcttcgtgca cggcgccggc tacctgcagg acgtgacgct
     2281 tggctggtcc aactatttcc gcgagcagat gttccacaac ctgctggtgc agcagggcta
     2341 cgtggtgctg gacatggact accgcgcctc cgaaggctac ggccgcgcgt ggcgcacggc
     2401 gatctaccgc cagatgggcc accccgagct ggaagacctg ctcgacggca aggcgtggct
     2461 ggtccggaac catcacgtcg acccgcgccg cgtcggcatc tacggcggca gctacggcgg
     2521 cttcatgacc gagatggcgt tgctgcgcgc gccgggcgaa ttcgccgccg gcgccgcact
     2581 gcgcgcgcca tcggactggg tcacctacaa ccacggctac acgtcg
//
LOCUS       DASSVL010000389         3727 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_220647, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000389 DASSVL010000000
VERSION     DASSVL010000389.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3727)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3727)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3727
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_220647"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..470
                     /locus_tag="VFM52_06790"
     CDS             <1..470
                     /locus_tag="VFM52_06790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017462617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF2782 domain-containing protein"
                     /protein_id="HET8764910.1"
                     /translation="VVAPAFAQSTSPLPKFAPLPPPPGMNDPGPQAVAPPSTPAPAAS
                     STPATVTATPLPGKPIPLPAAPGQKAETVPDQTPAGDVSVHTEGDAVYQEYKRGGRVY
                     MVVVTMKSGLSYTYMVDEQGVMHATNGAPPVRPVMYKVLQWGAPATPKGDDGK"
     gene            complement(474..1151)
                     /locus_tag="VFM52_06795"
     CDS             complement(474..1151)
                     /locus_tag="VFM52_06795"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007805982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HET8764911.1"
                     /translation="MHPLDRPAWASLVSFHQPLSIGDARARRYARDVNVFAAAGEETE
                     DTLAALAALVASGEQAYVLQVPPIQVPPELVAHKQAFCVQMLATTAVADAADTTDIQP
                     LGAADANEMLALATLTKPGPFRINTWRMGQFIGIRIGGRLAAMAGECFHCPGFAEVSG
                     VCTHPDFRGHGLASRLSRHVAARIAARGETAFLHAWRDHADAIHLYQRLGFTWRSDVN
                     VAVLARR"
     gene            complement(1265..2875)
                     /gene="purH"
                     /locus_tag="VFM52_06800"
     CDS             complement(1265..2875)
                     /gene="purH"
                     /locus_tag="VFM52_06800"
                     /EC_number="2.1.2.3"
                     /EC_number="3.5.4.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015446607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0003937 - IMP cyclohydrolase activity
                     [Evidence IEA];
                     GO_function: GO:0004643 -
                     phosphoribosylaminoimidazolecarboxamide formyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006164 - purine nucleotide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     phosphoribosylaminoimidazolecarboxamide
                     formyltransferase/IMP cyclohydrolase"
                     /protein_id="HET8764912.1"
                     /translation="MSRPAIVPVRRALISVSDKTGVIELGKRLAAKGVALLSTGGTAR
                     ALREAGVAVTDVSEVTGFPEIMDGRVKTLHPKIHGALLGRRGTDDAVMKELGIAGIDL
                     LVLNLYPFEATVAKPDCTLEDAIENIDIGGPAMLRSAAKNWNDVAVVTAPDQYAGVLA
                     EIESTGGVARATRFKLAVAAFNRVAAYGDAISNYLSGVELDDGCAKVTGHAAFPAQEN
                     AHYEKVMDLRYGENPHQQAAFYRDAKPEPGTLATFKQLQGKELSFNNIADADAAWECV
                     RSFHKPACVIVKHANPCGVAVSLDGIGKAYDLAFQTDPTSAFGGIIAFNRELDGATAE
                     AIVARQFVEVVLAPGYTDAALAALAKKHNVRALVIPPPANGELWAAHPGHNVKRVGSG
                     LLVQTADTGMITAADLKVVTKLAPTEAQVNDLIFAWKVAKFVKSNAIVYARNRQTIGV
                     GAGQMSRVYSAKIAGIKAADEKLEVRGSVMASDAFFPFRDGIDAAAAAGISAVIQPGG
                     SMRDAEVIAAADEHGMAMVFTGMRHFRH"
     gene            complement(2996..3286)
                     /locus_tag="VFM52_06805"
     CDS             complement(2996..3286)
                     /locus_tag="VFM52_06805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015446608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HET8764913.1"
                     /translation="MPVNAVRSPATEAAARPAASQSALGECVTRTVRRYLTDIGDTEC
                     SEGLHALVIHEVEGPLLREVLAFHGGNQSRAAAVLGINRATLRKKLAAHGLL"
     gene            complement(3455..>3727)
                     /locus_tag="VFM52_06810"
     CDS             complement(3455..>3727)
                     /locus_tag="VFM52_06810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015446609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3426 domain-containing protein"
                     /protein_id="HET8764914.1"
                     /translation="VEAHPNAAHALMISLSLRNQAGFAQPWPVVVVTLYDAHGHQLAM
                     RRLQPGDYLDDPDVQRNGLAPGATTALLLEVEDPGDQAVAYDFRFE"
BASE COUNT          554 a         1271 c         1322 g          580 t
ORIGIN      
        1 tggtggtcgc accggcgttc gcgcagtcga cttccccgtt gccgaagttt gccccgttgc
       61 cgccaccgcc cggcatgaac gaccccggcc cgcaggcggt ggcgccgccc agcacgccgg
      121 cgccggcagc cagcagcacg ccggcgaccg tcaccgcgac gcccctgccg ggcaagccga
      181 tcccactgcc ggccgcgccg ggccagaagg cggagaccgt gccggaccag acgccggccg
      241 gcgacgtcag cgtgcacacc gagggcgacg cggtgtacca ggaatacaag cgcggcggcc
      301 gcgtctacat ggtggtggtg acgatgaaga gcgggctgtc ctacacctac atggtggacg
      361 agcagggcgt gatgcacgcc accaacggcg cgccgccagt gcgcccggtg atgtacaagg
      421 tgctgcagtg gggggcgccg gcgacgccca agggcgacga cggcaagtga gcttcagcgg
      481 cgcgcaagca cggcgacgtt cacgtcgctg cgccaggtga agcccaggcg ctggtagaga
      541 tggatggcat cggcgtgatc ccgccacgcg tgcaggaacg cggtttcgcc gcgtgcggca
      601 atacgtgcgg caacgtggcg tgacaggcgg ctggccagcc cgtggccacg gaaatccggg
      661 tgcgtgcaca cgccgctgac ctcggcgaaa ccggggcagt ggaagcactc gccggccatc
      721 gccgccagcc gccctccgat gcggatgccg atgaactggc ccatgcgcca ggtgttgatg
      781 cggaacggac cgggtttggt gagcgtggcc agcgccagca tctcgttggc gtcggccgcg
      841 cccagcggct ggatgtccgt ggtatccgcg gcgtccgcga ccgccgtggt ggcgagcatc
      901 tgcacgcaga aagcctgttt gtgcgccacc agctccggcg gcacctggat cggcggcacc
      961 tgcagtacat aggcctgttc gccggatgcg accagcgcgg ccagcgccgc cagcgtgtct
     1021 tcggtttcct caccggcggc ggcaaagacg ttgacgtcgc gtgcgtagcg ccgggcgcgt
     1081 gcgtcgccga tcgacagcgg ttgatggaag gaaaccaggc tggcccatgc cgggcggtcg
     1141 agcggatgca tcacggtgcc ttgcggggat gcgggaacgc gatcggccga cgcgcaggca
     1201 tcggccgatc ggggtcacgc tgatgccgcg atggtaacgc caccgaccgc gggagatccg
     1261 ggcctcagtg gcggaagtgg cgcatgccgg tgaacaccat cgccatgccg tgctcgtccg
     1321 cagcggcgat cacctcggcg tcgcgcatcg acccgccggg ctggatcacc gcgctgatgc
     1381 ccgccgcggc ggcggcgtcg atgccgtcgc ggaacgggaa gaacgcgtcg ctggccatca
     1441 ccgagccgcg cacctcgagc ttctcgtcgg cggccttgat gccggcgatc ttcgcgctat
     1501 agacgcggct catctggccc gcgccgacgc cgatggtctg gcggttcctg gcatagacga
     1561 tggcgttgga cttgacgaac ttcgccacct tccaggcaaa gatcaggtcg ttcacctgcg
     1621 cctcggtcgg tgcgagcttc gtcaccacct tgagatcggc ggcggtgatc atgccggtgt
     1681 cggcggtctg caccagcagg cccgagccga cgcgcttgac gttgtggccg ggatgcgcgg
     1741 cccacagttc gccgttcgcc ggcggcggaa tcaccagcgc gcgcacgttg tgcttcttcg
     1801 ccagcgcggc gagtgccgca tcggtgtagc cgggcgccag caccacctcg acgaactggc
     1861 gggcgacgat ggcttcggcg gtggcgccgt ccagctcgcg gttgaacgcg atgatgccgc
     1921 cgaacgccga ggtcgggtcg gtctggaagg cgaggtcgta ggccttgccg atgccgtcga
     1981 ggctcaccgc gacgccgcac gggttggcat gcttcacgat cacgcacgcc ggcttgtgga
     2041 agctgcgcac acactcccac gccgcatccg cgtcggcaat gttgttgaac gacagctcct
     2101 tgccctgcag ctgcttgaac gtcgccagcg tgcccggctc gggctttgca tcacggtaga
     2161 acgccgcctg ctggtgcggg ttctcgccgt agcgcagatc catcaccttc tcgtaatggg
     2221 cgttttcctg cgccgggaac gcggcgtggc cggtcacctt cgcgcagccg tcgtccagtt
     2281 ccacgccgga gaggtaattg ctgatcgcgt cgccgtacgc ggccacgcgg ttgaacgccg
     2341 ccaccgccag cttgaagcgc gtggcccgcg caacgccgcc ggtggactcg atctcggcca
     2401 gcacgccggc gtactggtcg ggcgcggtga ccaccgccac gtcgttccag ttcttcgccg
     2461 ccgagcgcag catcgccggg ccgccgatgt cgatgttctc gatcgcgtct tccagcgtgc
     2521 aatcgggctt ggcgacggtc gcctcgaacg ggtacaggtt cagcaccagc aggtcgatgc
     2581 cggcgatgcc gagctccttc atcaccgcat cgtcggtgcc gcgccggccg agcagcgcgc
     2641 cgtggatctt cgggtgcagc gtcttgaccc ggccgtccat gatttccgga aagccggtga
     2701 cctcgctgac gtcggtcacc gccacgccag cctcgcgcag cgcgcgtgcg gtgccgccgg
     2761 tcgacagcag cgccacaccc ttcgccgcca gccgcttgcc cagttcgatc accccggtct
     2821 tgtcggacac gctgatgagc gcacggcgaa cggggacgat ggcggggcgg gacatggtgt
     2881 cgactccagg aatgggaaac gggggatggg gaacgcgctg cggctcgatg ggcgtcggag
     2941 acaggaccgc ggctgcgtgc cccatgcccg atggattgct cccaagcccg tcctctcaga
     3001 gcaggccgtg cgcagccagc ttcttgcgca acgtggcgcg gttgatgccg agcacggcgg
     3061 cagcgcggct ctggttgccg ccgtggaacg ccagcacctc gcgcagcagt gggccctcga
     3121 cctcgtggat caccagcgca tgcaagcctt cgctgcattc ggtgtcgccg atgtcggtga
     3181 gatagcggcg cacggtgcgt gtcacgcatt cgccgagcgc actttgcgaa gcggccggac
     3241 gggcggcggc ttcggtggct ggcgatctca cggcattcac tggcattccc tctgcatggg
     3301 cgcgacggcg gcactgcagc ggacgaggcg ccggagcgcg gccgcagcga actgtcgttc
     3361 ttggtcttgt gggcgccgta cgacggcgtc gaagaccgat gagtctaccc gtgccggcgc
     3421 cggattttaa gtgcccgtcg ccggcccggc agcgtcactc gaagcggaag tcataggcca
     3481 ccgcctggtc gccagggtcc tcgacctcga gcagcaacgc ggtggtcgcg ccgggggcca
     3541 ggccattgcg ttgcacatcc ggatcgtcga gatagtcacc gggctgcagc cggcgcatgg
     3601 ccagctggtg gccatgcgcg tcgtacagcg tgaccaccac caccggccac ggctgcgcga
     3661 agcccgcctg gttgcgcagg ctcaggctga tcatcagcgc gtgggcggcg ttcgggtggg
     3721 cttcgac
//
LOCUS       DASSVL010000390         2482 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_799729, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000390 DASSVL010000000
VERSION     DASSVL010000390.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2482)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2482)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2482
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_799729"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..322
                     /locus_tag="VFM52_06815"
     CDS             <1..322
                     /locus_tag="VFM52_06815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017907837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8764915.1"
                     /translation="HACHVAGDDVHAGIAYADATFLSGHAADALDQLHRLLKRTDLDY
                     YSRAQIDARIAQVTPIVLENRRRHLDQDQDGNDNSSLQNEASPNRQTGFRFGACAGAA
                     CMQP"
     gene            393..1124
                     /locus_tag="VFM52_06820"
     CDS             393..1124
                     /locus_tag="VFM52_06820"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008439524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_process: GO:0000413 - protein peptidyl-prolyl
                     isomerization [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HET8764916.1"
                     /translation="MIPIRHSLCRLLPVLLVPFAFALARAQAAPPVSASSSPAPAAPA
                     HPQVEIKTSQGDFVLELFPDKAPKTVANFLQYVKDGFYDGTVFHRVIPGYLVQGGLYT
                     RQLRPKRTQPSIPDEANNGLSNLRGTVAAARGPDPDSATAQFFINVVDNPRLDYVGNQ
                     SGMTWGYAVFGKVVKGMDVVDKIDNLPTGPQGPFIGDVPRPLVVIEGAKVIGEAAHPV
                     EEPVSPVTGQVPASAPPASKKPAKH"
     gene            1128..1877
                     /gene="lpxH"
                     /locus_tag="VFM52_06825"
     CDS             1128..1877
                     /gene="lpxH"
                     /locus_tag="VFM52_06825"
                     /EC_number="3.6.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019465459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008758 - UDP-2,3-diacylglucosamine
                     hydrolase activity [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-2,3-diacylglucosamine diphosphatase"
                     /protein_id="HET8764917.1"
                     /translation="MATLFVSDLHLDDARPHIVADFERFCAGEAHSADALYILGDLFE
                     AYVGDDDDAALNTRLAGALHGVADAGVPVHFIAGNRDFLVGEAYARRCGMQLLDDGSV
                     VDLYGTPTLILHGDVLCTDDAAYLAFRKQVRDPAWQAAFLARPLVERRAFAAQARDAS
                     RAHTSSTDMAIMDVNQRAVEGALRRAGVMRMIHGHTHRPAIHDFTLDGNPARRIVLGD
                     WYEQGSVLRVDADGATLQRLAPQGAATGARS"
     gene            1874..2341
                     /locus_tag="VFM52_06830"
     CDS             1874..2341
                     /locus_tag="VFM52_06830"
                     /inference="COORDINATES: protein motif:HMM:NF014373.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MgtC/SapB family protein"
                     /protein_id="HET8764918.1"
                     /translation="MNVLVEELTTGLPNGTELLRVLIRLLGAMLAGAVLGLQRERADK
                     PAGLRTHILVALGAAIFVAVPTQLGMGPDGLSRVIQGIATGIGFLGGGVILKLASERK
                     IEGLTTAADIWTTAAIGVAIGLGALGIGLIATAFAWVVLSVLYRVEVRRKNPR"
BASE COUNT          383 a          882 c          810 g          407 t
ORIGIN      
        1 ccacgcctgc cacgtcgccg gcgacgacgt gcacgccggc atcgcgtacg ccgacgccac
       61 cttcctgtcc ggccacgccg ccgacgcgct ggaccagctg catcgcctgc tgaaacgcac
      121 cgacctcgac tattacagcc gcgcccagat cgacgcgcgc atcgcgcagg tcacgccaat
      181 cgtgctggaa aaccgccggc ggcatctcga ccaggaccag gacggcaacg acaacagctc
      241 gctgcagaac gaggcctcgc cgaaccgcca aaccggattc cggttcggcg cctgcgcggg
      301 cgccgcgtgc atgcagccgt gaatcggcgt gctccgctgt ctgcggcagt gcgttcgctt
      361 atcatgccgc tctgggccct tcgactcgcg ccatgatccc gatccgccat tcgctttgcc
      421 ggctgctgcc cgtcctgctc gtgccgttcg cgttcgcgct tgcccgtgcg caggccgcac
      481 caccggtttc ggcctcctcg tcgccggcac cagccgcgcc cgcgcatccg caggtcgaga
      541 tcaagacctc gcagggcgac ttcgtgctcg agctgtttcc cgacaaggcg cccaagaccg
      601 tcgccaactt cctgcaatac gtgaaggacg gtttttacga cggcaccgtg ttccaccgcg
      661 tgattccggg ttacctggtc cagggcgggc tatacacgcg gcagttgcgg cccaagcgga
      721 cgcagccgtc gattcccgat gaagccaaca acggcttgtc gaacctgcgc ggcaccgtgg
      781 ccgccgcgcg cggacccgat cccgattcgg ccaccgcgca gttcttcatc aacgtggtcg
      841 acaatccgcg tctcgactat gtcggcaacc agagcggcat gacctggggc tatgcagtgt
      901 tcggcaaggt cgtgaaaggc atggacgtgg tggacaagat cgacaacctg ccgaccggcc
      961 cgcagggccc attcatcggc gacgtgccgc gtccgctggt ggtgatcgaa ggcgcgaaag
     1021 tgatcggcga agccgcgcat cccgtcgagg aacccgtgtc gccggtgacc ggacaggtgc
     1081 ctgcttcggc gccgccggct tcgaagaagc ccgcgaagca ctgatccgtg gcgacgctgt
     1141 tcgtctccga tcttcacctc gacgacgcgc gcccgcacat cgtcgcggac ttcgagcgct
     1201 tctgcgcggg cgaagcacac agcgccgacg cgctctacat cctgggcgac ctgttcgagg
     1261 cctatgtcgg cgacgacgat gatgccgcct tgaacacgcg cctcgccggc gcgctgcatg
     1321 gcgtcgccga cgcgggcgtg ccggtgcatt tcatcgcggg caatcgcgac ttcctcgtgg
     1381 gcgaggcata cgcgcgccgc tgcggcatgc agctcctcga cgacggcagc gtggtcgatt
     1441 tatacggcac gcccacgttg atcctgcacg gggacgtgct atgcaccgac gacgcggcct
     1501 acctcgcatt ccgcaaacag gtgcgcgatc cggcctggca ggccgcgttc ctcgcccgtc
     1561 cgctggtcga gcgccgcgcg ttcgcggcgc aggcccgcga cgccagtcgc gcgcacacct
     1621 caagcaccga catggcgatc atggacgtca accagcgtgc cgtggaaggc gcattgcgcc
     1681 gggccggcgt catgcggatg atccacggcc acacccatcg tcccgcgatc cacgatttca
     1741 cgctggacgg aaaccccgcg cgtcgcatcg tgctgggcga ctggtacgag cagggttcgg
     1801 tgctgcgcgt ggacgcggat ggcgcaacgt tgcagcggct ggctccgcaa ggcgctgcca
     1861 cgggtgcacg gtcatgaacg tgctggtgga ggaactcacc accggcctgc ccaatggcac
     1921 cgagctgttg cgggtgctga tccggctgct cggcgccatg ctggcaggcg cggtgcttgg
     1981 cttgcagcgc gaacgcgcgg acaagcctgc gggcctgcgc acccacatcc tggtcgcgct
     2041 cggcgccgcc atcttcgtgg cggtgcccac gcaactcggg atgggccccg acggattgtc
     2101 ccgagtgatc cagggcattg ccaccggcat cgggttcctc ggcggcggcg tgatcctgaa
     2161 gctcgcttcc gagcgcaaga tcgagggctt gaccacggcg gcggacatct ggacgacggc
     2221 ggcgatcggg gttgcgatcg gcctgggtgc actcggcatc ggcctgatcg ccacggcatt
     2281 cgcctgggtt gtgctgagcg tcctctaccg cgtcgaggtg cggcggaaaa atccgcgcta
     2341 gcaacccggt tcccggctca acccccggcc gcgtcgatcg cttcgcgcaa gcgttccacg
     2401 ccgatcactt ccagatcgcc ggtgcgcgtg gatttcttcg gcgcgttggc gcgcggcacg
     2461 atcgcgcgcc ggaagccgtg gt
//
LOCUS       DASSVL010000391         2221 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_178468, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000391 DASSVL010000000
VERSION     DASSVL010000391.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2221)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2221)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2221
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_178468"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..628)
                     /locus_tag="VFM52_06835"
     CDS             complement(<1..628)
                     /locus_tag="VFM52_06835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007082957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LD-carboxypeptidase"
                     /protein_id="HET8764919.1"
                     /translation="MPATRVRLIAPSGYPHDRAAMTRGVARLYEAGCVVDAMDVLERT
                     ELRYAGSDAERAADLNALAMLDELPDIALATRGGYGATRLLEHLRYDALRERLGGTGT
                     ALVGHSDFTAIQLALFAQAGLVTFGGPMLAADFGAEVASDFTLSRFWATVRAAQASAT
                     WSTSSEQLLDVEGLLWGGNLAMLCSLLQSPYFPRIEGGILFVEDIGEPP"
     gene            complement(785..1876)
                     /gene="ribB"
                     /locus_tag="VFM52_06840"
     CDS             complement(785..1876)
                     /gene="ribB"
                     /locus_tag="VFM52_06840"
                     /EC_number="4.1.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007810119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008686 -
                     3,4-dihydroxy-2-butanone-4-phosphate synthase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3,4-dihydroxy-2-butanone-4-phosphate synthase"
                     /protein_id="HET8764920.1"
                     /translation="MSFNTIPEILADIRAGRMVVMLDDEGRENEGDLIMAAQHVRPED
                     VNFMTREARGLLCLTLTVERTHQLGLRPMVADNTSAYHTNFTVSIEAAEGVTTGISAF
                     DRAHTIQTAVRRNAGPRDLTQPGHVFPLTAQPGGVLTRAGHTEAGCDLAALAGLEPAS
                     ILIEILHEDGTMARRPELETFAHKHGLKIGTIADLIRHRLQTEKTVQRVHEEDVQTAY
                     GTFRLVAYRDMVHLGLHFALVRGRVDDGAPVLARVHVRNTLGDVLHLQRDDLGLGVGD
                     ALQRIAAEDRGVLLVLTGEDTPEMMLSRLTGEKPALAAGDASQREWRQLGLGAQMLAD
                     LGARRLRVLGTPRKLVGLAGFGLEVVEYV"
     gene            complement(1937..>2221)
                     /locus_tag="VFM52_06845"
     CDS             complement(1937..>2221)
                     /locus_tag="VFM52_06845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007507193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="riboflavin synthase"
                     /protein_id="HET8764921.1"
                     /translation="RWQFDVPAALARYIAAKGSVCIDGVSLTVNEVTGNRFGVNLIPH
                     TVEHTAFHARRAGDAVNIEVDLIARYVERLIHGDDASRLDESFLQRHGFA"
BASE COUNT          349 a          744 c          796 g          332 t
ORIGIN      
        1 acggcggctc gccgatgtcc tccacgaaca ggatgccgcc ctcgatgcgg gggaaataag
       61 gcgactgcag caggctgcac agcatggcga gattgccacc ccacagcagc ccttccacgt
      121 cgagcagctg ctcgctggaa gtcgaccacg tggcgctggc ctgcgcggcg cgcacggtgg
      181 cccagaaccg ggacaaggtg aaatcgctcg ccacctcggc gccgaaatcg gcggccagca
      241 tcggcccgcc aaacgtgacc agcccggcct gtgcaaacag cgccagctgg atcgcggtga
      301 agtcactgtg gcccaccaac gcggtgccgg ttccgcccag gcgctcgcgc agcgcgtcgt
      361 aacgcaggtg ttccagcagc cgcgtcgcgc cgtagccgcc gcgggtggcc agcgcgatgt
      421 cgggcaactc gtccagcatc gcgagcgcgt tgaggtcggc ggcgcgctcg gcgtcgctgc
      481 cggcgtaacg cagctccgtg cgctccaaca cgtccatggc gtccaccacg cagccagcct
      541 cgtacagacg ggccacgccg cgggtcatcg cggcacggtc atgcggatag ccggaaggtg
      601 cgatcaggcg gacgcgggta gcgggcatgg gtgtcaacag cagcttggac gtccggatta
      661 tgcgtgcacg caccgcccag gacatggcct gcgcatggca caggccgggc gatcccacag
      721 gggcgccccg tgcacgaatg ctcccggccg gaccgccgga agcttttggc atcctgggca
      781 gctcttaaac gtactccacc acttcgagac cgaagccggc cagcccgacg agcttgcgcg
      841 gggtgccgag cacccgcaac ctgcgtgcgc cgaggtcggc gagcatctgc gcgccgaggc
      901 cgagctggcg ccattcgcgc tgcgaggcat cgcccgcggc cagcgccggc ttctcgccgg
      961 tgaggcgcga cagcatcatc tccggcgtgt cctcgccggt gagcaccagc agcacgccgc
     1021 ggtcctcggc ggcgatgcgc tgcagcgcgt cgcccacgcc caggccgaga tcgtcgcgct
     1081 gcaagtgcag cacgtcgccc agcgtgttgc gcacgtgcac gcgcgccagc accggcgcgc
     1141 cgtcgtcgac gcggccgcgc accagcgcaa agtgcaggcc aaggtgcacc atgtcgcgat
     1201 aggccaccag gcggaacgtg ccgtatgcgg tctgcacgtc ttcctcgtgc acgcgctgca
     1261 cggtcttctc ggtttgcaag cgatgacgga tgaggtcggc gatggtgccg atcttgagcc
     1321 cgtgcttgtg cgcgaacgtc tccagctcgg ggcggcgcgc catggtgccg tcctcgtgca
     1381 ggatctcgat caggatcgac gccggttcga gcccggccag cgcggcgaga tcgcaacccg
     1441 cctcggtatg cccggcgcgc gtcagcaccc cgcccggctg cgccgtgagc ggaaacacat
     1501 ggcccggctg ggtcaggtcg cgcgggccgg cgttgcggcg caccgcggtc tggatggtgt
     1561 gcgcgcgatc gaacgcggag atgccggtgg tcaccccttc ggccgcctcg atcgagacgg
     1621 tgaagttggt gtggtaggcc gaggtgttgt cggccaccat cgggcgcagg ccgagctggt
     1681 gcgtgcgctc gaccgtgagc gtcaggcaca gcaggccgcg cgcctcgcgg gtcatgaagt
     1741 tgacgtcctc ggggcgcacg tgctgcgcgg ccatgatgag gtcgccttcg ttttcgcggc
     1801 cttcgtcgtc gagcatgacg accatgcggc cggcgcggat gtcggcgagg atttcgggga
     1861 tggtgttgaa ggacatggga ttcggaatat gcggtgaggg gtacgggaaa accggactgc
     1921 gacgacgcgc ggcgtttcag gcgaagccgt ggcgctgaag gaaggactcg tcgagcctgg
     1981 aggcatcgtc gccatggatc aggcgctcga cgtagcgtgc gatcaggtcg acttcgatgt
     2041 tcacggcatc gccggcgcga cgcgcgtgga aggcggtgtg ctcgacagtg tgcggaatca
     2101 ggttcacgcc gaagcggttg ccggtgactt cgttcaccgt gaggcttacg ccatcgatgc
     2161 acaccgagcc cttcgccgcg atgtagcgcg cgagcgcggc gggcacgtcg aactgccagc
     2221 g
//
LOCUS       DASSVL010000392         2853 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1407006,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000392 DASSVL010000000
VERSION     DASSVL010000392.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2853)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2853)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2853
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1407006"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(30..1022)
                     /gene="hemB"
                     /locus_tag="VFM52_06850"
     CDS             complement(30..1022)
                     /gene="hemB"
                     /locus_tag="VFM52_06850"
                     /EC_number="4.2.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007810331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0004655 - porphobilinogen synthase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0033014 - tetrapyrrole biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="porphobilinogen synthase"
                     /protein_id="HET8764922.1"
                     /translation="MGFPATRMRRMRHDAFSRALMREHTLLPSDLIMVAFVIEGEHQR
                     EPVPSMPGVSRLSIDELLKLAGECVRLGIPALALFPSPGDGVKSLDAREAWNPDNLMH
                     RATRALKQAYPDLGLIGDVALDPYTTHGQDGLIDDAGYVMNEPTVEALVKMSLAQADA
                     GMDIVAPSDMMDGRIGAIRDALEAAGHIHTRILAYSAKYASSFYGPFRDAVGSSASLG
                     KGNKHTYQMDFGNSNEALHEVELDIDEGADMVMVKPGLPYLDVLRRVKDTFGVPTFVY
                     QVSGEYAMLKAASQNGWLDEKAVVLEALTSMKRAGADAILSYYAIDAARWLRGE"
     gene            1170..2738
                     /locus_tag="VFM52_06855"
     CDS             1170..2738
                     /locus_tag="VFM52_06855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019463523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S53 family serine peptidase"
                     /protein_id="HET8764923.1"
                     /translation="MNSSPRQAIHTDHPLPAGTRYLGPHSTRTPLEVTVVFRRMGPPP
                     ATAAWPQSPRWSRSEFGMHCGADPIDIDRMRRHARAHGLVETGCEPHRRVLHLRGSLD
                     AMQRAFGVQLGRYRVPGTRRYVVCCDHAPSLPDDIAPAVLAVLGLDRRPVAKPHFRRP
                     LAVPNQTYTPPQLGRLYRFPANTDGSGQGVVLIELGGGLRQTDLATYFAALGIATPPK
                     VTAVSVAGGKNRPGGNADAEVMLDIEVVGALAPGAAIAVYFAPNTDQGFYEAISQAAH
                     DAKHKPSVISISWGGPEDSWSVSALAAMQSALEDAAALGVTVTAAAGDGGSSDGESDG
                     QPHVDYPASSPYALACGGTTLRAGTSAITSEVVWNETAANEGATGGGVSTDYALPSWQ
                     QDSKVPKAPNGFVGRGVPDVAGDADPLTGYQVRVDGQDTVIGGTSAVAPLWAALLARC
                     NQSLGRAVGDPHAAFYLIGEAAFRDVTRGNNGSYAAGKGWDACTGLGSPDGQTLLAAL
                     AAQGKPAAGRRLQA"
BASE COUNT          438 a         1001 c         1003 g          411 t
ORIGIN      
        1 caagcgggct tcctacgggc ggggtgggat cactcgccgc gcagccacct tgcggcgtcg
       61 atcgcgtagt agctgaggat cgcgtcggcg ccggcgcgct tcatggaagt gagtgcttcg
      121 agcaccaccg ccttctcgtc cagccagccg ttctgcgagg ccgccttgag catcgcgtac
      181 tcgcccgaca cctggtacac gaaggtcggt acgccgaagg tgtccttcac ccggcgcagc
      241 acgtcgaggt acggcaggcc cggcttcacc atcaccatgt cggcgccttc gtcgatgtcc
      301 agctcgacct cgtgcagcgc ctcgttggaa ttgccgaagt ccatctggta ggtgtgcttg
      361 ttgcccttgc cgaggctggc ggaggagccc accgcatcgc ggaacgggcc atagaagctc
      421 gatgcgtact tggccgaata cgcgaggatg cgggtgtgga tgtggccggc ggcttccagc
      481 gcgtcgcgga tggcgccgat gcggccgtcc atcatgtccg agggcgcgac gatgtccatg
      541 ccggcgtcgg cctgcgcgag cgacatcttc accagcgctt ccaccgtggg ctcgttcatc
      601 acgtagccgg catcgtcgat caggccgtcc tggccgtgcg tggtgtacgg gtcgagcgcg
      661 acgtcgccga tcaggccgag gtcgggatac gcctgcttca gcgcgcgggt ggcgcgatgc
      721 atgaggttgt cgggattcca cgcctcgcgc gcatccagcg acttcacccc atcgcccggc
      781 gaggggaaca gcgccagcgc cgggatgccc aggcgcacgc attcgccggc cagcttgagc
      841 agctcgtcga tcgacagccg gctcacgccc ggcatcgacg gcaccggctc gcgttggtgc
      901 tcaccctcga tcacgaacgc caccatgatg aggtcggacg gcagcagcgt gtgttcgcgc
      961 atcagcgcgc gggagaacgc atcgtggcgc atgcggcgca tgcgggtggc gggaaaaccc
     1021 atggcgaagc ctcgtgttgc gatccgtgca ttttaacgcg acgcatcgcc ggccacggcc
     1081 tgaaccgcgc aacaaggcac caacatcaaa ccaacgcgat gtctacattt cacggcgcac
     1141 ggtgagcgcg tccccagcga ggaatcgcga tgaacagctc gccacgccaa gccatccaca
     1201 ccgatcaccc gctccccgcc ggcacgcgct acctcggccc gcacagcacg cgcaccccgc
     1261 tcgaggtcac cgtggtgttt cgccgcatgg ggccgccgcc ggcgaccgcc gcgtggccgc
     1321 agtccccgcg ctggtcgcgc agcgaattcg gcatgcactg cggcgccgat cccatcgaca
     1381 tcgaccgcat gcgtcgccac gcccgggcgc acgggctggt ggaaaccggc tgcgaaccgc
     1441 atcggcgcgt gctgcacctg cgtggttcgc tggacgcgat gcagcgcgcg ttcggcgtgc
     1501 agctgggccg ctaccgggtg cccggcacgc gccgctacgt ggtgtgctgc gaccacgccc
     1561 ccagcctgcc ggacgacatc gcacccgccg tgctggcggt gctggggctg gatcgccgcc
     1621 cggtggcgaa gccgcacttc cgcaggccgc tggcggtacc aaaccagacc tacacaccgc
     1681 cgcagctggg gcggctctac cgctttcccg cgaacaccga cggcagcggc cagggcgtgg
     1741 tgttgatcga gctcggtggc ggcttgcgcc agaccgacct cgccacgtac ttcgccgcgc
     1801 tgggcatcgc cacgccgccc aaggtgacgg cggtatccgt ggccggtggc aagaaccgcc
     1861 ccggcggcaa cgccgacgcg gaggtgatgc tggatatcga ggtggtcggc gcgctggcgc
     1921 cgggcgcggc gatcgccgtg tacttcgcgc caaacaccga ccaggggttc tacgaggcga
     1981 tctcgcaggc cgcgcacgac gccaagcaca agccgtcggt gatctcgatc agctggggtg
     2041 gccccgagga cagctggagc gtgtccgcgc tcgccgcgat gcagagcgcg ctggaggatg
     2101 ccgccgcgct cggcgtcacg gtgaccgccg ccgcaggcga cggcggttcc agtgacggcg
     2161 agagcgacgg ccagccgcac gtggattacc ccgcatccag cccttatgcg ctggcctgtg
     2221 gcggcaccac gctgcgcgcc ggcaccagcg cgatcaccag cgaggtggtg tggaacgaga
     2281 ccgcggcgaa cgagggcgcc accggcggcg gcgtcagcac cgactacgcg ctgccgagct
     2341 ggcagcagga cagcaaggtg ccgaaggcgc cgaacgggtt cgtgggtcgc ggcgtgcccg
     2401 atgtggccgg cgatgccgat ccgctcaccg gctaccaggt gcgggtggac ggccaggaca
     2461 cggtgatcgg cggcaccagt gcggtggcgc cgttgtgggc cgccttgctg gcgcgctgca
     2521 accagtcgct ggggcgcgcc gtgggcgacc cgcacgccgc gttctacctg atcggtgaag
     2581 ccgcctttcg cgatgtgacc cgcggcaaca acggcagcta cgccgccggc aagggttggg
     2641 atgcgtgcac cgggcttggc agtccagacg gccaaacact gcttgcggca ctggccgcgc
     2701 aaggcaagcc cgccgcgggt cggcgcctgc aggcttgaag agcccgcgac ccgatggggc
     2761 ggcagccgat gaacgggtct gcgccggctg ccggcgcgcc gcgtgaagtc gctcgcgcac
     2821 gcgatgcaga ccagtgcgcc gcatcgtgcc gac
//
LOCUS       DASSVL010000393         2235 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1195326,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000393 DASSVL010000000
VERSION     DASSVL010000393.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2235)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2235)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2235
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1195326"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2133)
                     /locus_tag="VFM52_06860"
     CDS             complement(<1..2133)
                     /locus_tag="VFM52_06860"
                     /EC_number="2.7.6.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008433918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0015970 - guanosine tetraphosphate
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional (p)ppGpp
                     synthetase/guanosine-3',5'-bis(diphosphate)
                     3'-pyrophosphohydrolase"
                     /protein_id="HET8764924.1"
                     /translation="MTTHPHPTRLQAWHDRAGALAPALAAALEACATRAVDQAECADV
                     LDTLAMLGCDAATQAAALWFALAQADPALWQERAPTLPEDVRRLVEGQQAAEKVWTLH
                     AQRSQAGSSEGLRRLLLAIIRDLRVVFVLLARQLARMRAATALAEAERHALARLTRDI
                     HAPLANRLGIWQLKWELEDLAFRYLQPDTYKRIARLLDERRADREAFIAESLATLGQA
                     LHEAGIRADLAGRPKHIYSIWKKMQKKGVAFTELYDIRAVRVLVDTVADCYAALGVVH
                     TLWVHLPREFDDYLARPKGNGYRSLHTAVIGPRGKTLEVQIRTHQMHRDNELGVAAHW
                     RYKEGGGADAEFEAKVAWMRKLLETRGEDDGALAAELKTELMEDRVYLLTPKGEVVDL
                     PHGGTVLDFAYHVHTEVGHRCRGAKVNGRIVPLTFQPQSGDRVEILTAKQAEPSRDWL
                     SPHHGYLNSSRARDKVRAWFRRLAHDANLAVGRAMFERERKRLALPEVDIARLPAHFH
                     LKSQDELLIALALNEISPGQIAHALQELAQPPADETSLPLAPVRPAPARDPGALSIEG
                     IGNLLTTLARCCQPLPGDPVRGYVTKGRGVSVHRADCAALARLGKRDPDRVIEVAWGK
                     AGAQAYEVDIELRGYDRKGLQKDVTNVISNANTPILASSTRAFAASGEVEMRFALRVR
                     DFEQLSGLLGRLLALPNVVETRRVGGSHT"
BASE COUNT          271 a          765 c          840 g          359 t
ORIGIN      
        1 cgtgtgcgag ccgccgacgc ggcgggtctc caccacgttg ggcagcgcca gcagtcggcc
       61 aagcaggccg gagagctgct cgaaatcgcg cacgcgcagg gcgaagcgca tttccacctc
      121 gccgctggcg gcgaaggcgc gggtggacga ggcgaggatg ggcgtgttgg cgttgctgat
      181 gacgttggtg acgtccttct gcaggccctt gcggtcgtag ccgcgcagtt cgatgtccac
      241 ctcgtaggct tgcgcgccgg ccttgcccca ggccacctcg atcacgcggt ccggatcgcg
      301 cttgcccagc cgcgccagtg cggcgcagtc ggcgcggtgc accgatacgc cgcggccctt
      361 ggtgacgtag ccgcgcaccg ggtcgccggg cagcggctgg cagcagcgcg ccagcgtggt
      421 gagcaggttg ccgatgccct cgatgctgag cgcgccgggg tcgcgcgcgg gcgccgggcg
      481 caccggggca agcggcaggc tggtttcgtc ggccggtggt tgcgcgagct cctgcagggc
      541 gtgcgcgatc tggccggggc tgatctcgtt cagcgccagc gcgatcagca gctcgtcctg
      601 gcttttcagg tggaagtgcg ccggcagcct ggcgatgtcc acttcgggaa gggcgagccg
      661 cttgcgctcg cgctcgaaca tggcgcggcc cacggcgagg ttggcgtcgt gggcgaggcg
      721 gcggaaccag gcgcgcacct tgtcgcgcgc ccgcgagctg ttgaggtagc cgtggtgcgg
      781 cgacagccag tcgcggctgg gctcggcctg cttcgcggtg aggatctcca cccggtcgcc
      841 gctctgcggc tggaaggtga gcggcacgat gcggccgttg accttggcgc cgcggcagcg
      901 gtgccccacc tcggtatgca cgtggtaggc gaagtccagc acggtgccgc cgtgcggcag
      961 gtccaccact tcgcccttcg gggtgagcag gtagacgcga tcctccatca gctcggtctt
     1021 cagctcggcg gccagcgcgc cgtcgtcctc gccgcgcgtc tccagcagct tgcgcatcca
     1081 ggccaccttg gcctcgaact cggcgtcggc gccgccgccc tccttgtagc gccagtgtgc
     1141 ggccacgccc agttcgttgt cgcgatgcat ctggtgggtg cggatctgca cctccagcgt
     1201 cttgccgcgc gggccgatca ccgcggtatg cagcgagcgg tagccgttgc ccttgggtcg
     1261 ggcgaggtag tcgtcgaact cgcgcggcag gtgcacccac agggtgtgca ccacgcccag
     1321 cgcggcgtag cagtcggcca ccgtgtccac cagcacgcgc accgcgcgga tgtcgtacag
     1381 ctcggtgaag gccacgccct tcttctgcat cttcttccag atggaataga tgtgcttggg
     1441 gcggccggcg aggtcggccc ggatgccggc ctcatgcagc gcctggccca gcgtggccag
     1501 cgattcggcg atgaaggcct cgcggtcggc gcggcgctcg tcgagcagcc tggcgatgcg
     1561 cttgtaggtg tccggctgca ggtagcggaa ggcgaggtct tccagttccc acttgagttg
     1621 ccagatgccc aggcggttgg ccagcggcgc gtggatgtcg cgggtcagcc gcgccagcgc
     1681 atggcgctcg gcctcggcca gcgccgtggc cgcgcgcatg cgcgcgagct ggcgcgccag
     1741 cagcacgaac accacgcgca ggtcgcggat gatcgccagc agcagccggc gcagaccttc
     1801 cgagctgccg gcctggctgc gctgggcgtg cagcgtccac accttttccg ccgcctgctg
     1861 gccttccacc aggcggcgca cgtcctcggg cagggtcggc gcgcgttcct gccacagcgc
     1921 cgggtcggcc tgcgctagcg cgaaccacag cgccgccgcc tgcgtggcgg cgtcgcagcc
     1981 gagcatggcg agggtgtcga gcacgtccgc gcactcggcc tggtcgaccg cgcgcgtggc
     2041 gcaggcttcc agcgccgcgg ccagggcggg cgcgagcgca ccggcgcggt cgtgccaggc
     2101 ttgcaggcgg gtgggatgcg gatgtgtggt catggcggcg gtgtcgggac ggcgatcatt
     2161 ctaggagttt gcgtggtgtt tggcttcgcc gccccgtggc cgcagaatcg cggcattgcc
     2221 cttgccgcct accgc
//
LOCUS       DASSVL010000394         3186 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1210319,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000394 DASSVL010000000
VERSION     DASSVL010000394.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3186)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3186)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3186
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1210319"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..461)
                     /locus_tag="VFM52_06865"
     CDS             complement(<1..461)
                     /locus_tag="VFM52_06865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008212482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8764925.1"
                     /translation="MAPLHAQGLYDPRHEHDACGVGFVAHIKGRRNHAIIQQGLAILR
                     NLDHRGAVGADPLMGDGAGILIQIPDRLYREEMALRGISLPPPGEYGVGMIFLPREHA
                     SRLACEQELERKVRAEGQVLLGWRNVPVDGDMPMSPAVKEREPVIRQVFIGR"
     regulatory      697..865
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00050"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="FMN riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="flavin mononucleotide"
                     /db_xref="RFAM:RF00050"
     gene            986..1585
                     /locus_tag="VFM52_06870"
     CDS             986..1585
                     /locus_tag="VFM52_06870"
                     /EC_number="2.5.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017461533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="riboflavin synthase"
                     /protein_id="HET8764926.1"
                     /translation="MFTGIIQATGRVTRSEPRGGDLRLGIVAPEFDTSDVMLGDSVAV
                     SGCCLTVVAHEGDTLAFDISNESLALTTLGDLGMGDRVNLEKALRLSDRLGGHLVSGH
                     VDGIGSIVSVEPDARSQRWIIEAPLVLARYVAAKGSVCVDGVSLTVNTVDGARFGVNL
                     IPHTVEQTTFGDRRVGDRVNLEIDMLARYVERMLATGGQ"
     gene            1587..2711
                     /gene="ribB"
                     /locus_tag="VFM52_06875"
     CDS             1587..2711
                     /gene="ribB"
                     /locus_tag="VFM52_06875"
                     /EC_number="4.1.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014506643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008686 -
                     3,4-dihydroxy-2-butanone-4-phosphate synthase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3,4-dihydroxy-2-butanone-4-phosphate synthase"
                     /protein_id="HET8764927.1"
                     /translation="MAFATIPELQEEIAAGRMVVMLDDEDRENEGDLIMAADKVRAED
                     VNFMAREGRGLICLALDQARCRRLGLQPMVRDNGSVYHTNFTVSIEAASGVTTGISAH
                     DRARTIQVAVASGAKAADLVQPGHVFPLEAQPGGVLTRAGHTEAAVDLATLAGRTPAG
                     VLVEILREDGSMARRPDLETFAAKHGLKVGSIADLIRHRLATEKTIERVHESGVETEF
                     GAFRLIAWRDRLRGDLHFALVRGVVEGDQPVLTRVHVRNTLSDVLHLEREDLGMTMTA
                     ALRRIASEGRGVAVVLSSEEDVGVLLARLNHDAASAPATGRAAAQREWRQLGLGAQIL
                     ADLGVHRLRVLGTPRKLVGLSGFDLEVVEYVEEQGAGNRK"
     gene            2769..>3186
                     /gene="ribH"
                     /locus_tag="VFM52_06880"
     CDS             2769..>3186
                     /gene="ribH"
                     /locus_tag="VFM52_06880"
                     /EC_number="2.5.1.78"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011260255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009349 - riboflavin synthase complex
                     [Evidence IEA];
                     GO_function: GO:0000906 - 6,7-dimethyl-8-ribityllumazine
                     synthase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="6,7-dimethyl-8-ribityllumazine synthase"
                     /protein_id="HET8764928.1"
                     /translation="MSRQTATSPPDLHSPSGARYAVIASRWNGEIVDELVAGARRAFT
                     AHGVAEKAFDVLRVPGAWELPLVAKRLAASGRYVAVVALGCVVRGETRHYEHVADACA
                     RGLMRVALDAGVPVLNGVLAVEDEADAWARAGGAHGN"
BASE COUNT          507 a         1016 c         1136 g          527 t
ORIGIN      
        1 cggccgatga agacctgccg gatcaccggc tcgcgttcct tcaccgccgg cgacatcggc
       61 atgtcgccgt cgaccggaac gttgcgccag cccagcagca cctggccttc ggcgcgcacc
      121 ttgcgctcca gttcctgttc gcacgcaagt cgcgaggcgt gctcgcgcgg caggaagatc
      181 atgccgacgc cgtattcgcc gggcggcggc aggctgatgc cgcgcagcgc catctcctcg
      241 cgatacagtc ggtcgggaat ctggatcagg atgccggcgc cgtcgcccat cagcggatcg
      301 gcgcccaccg cgccgcgatg atcgaggttg cgcaggatcg ccaggccctg ctggatgatc
      361 gcgtgattcc tgcggccctt gatgtgcgcg acgaagccca cgccgcaggc gtcgtgttcg
      421 tggcgggggt cgtatagacc ctgtgcgtgc aagggcgcca tggtcttcgc tccgtcgggg
      481 gctcgattcc gactatagtg cggtgcagca aaaaggcaac aggtttttac gtccatacgt
      541 atggacgtcc aaatgtgtaa gtgggacggc ggattgggac tcgggcgggg ggcgaggacg
      601 agaggcgagg cgagctcccg cgcgtgaacg ggcacaggcg taccgacgtg gccgagtcgt
      661 cgaaggtgct agactgcaat ctccggcctg tgccggaaac gtcttcaggg cggggtggaa
      721 gtccccaccg gcggtaggcc cgcaagggcg agcccgcgag cgctttcgcc gatggcgaaa
      781 ggtcagcaga tccggtcgaa tgccggagcc gacggtcggc agcaggtcaa cgctgccgga
      841 aagtccggat aaagcgaagg cggtccgatc gcggcaatgt ccgcgcgtcg gcctcatgcc
      901 ttggggcgtt ctcgccattc gtcacgcgga gaacgttcat gtccatcatt cgtggatccg
      961 ccgccttctt tggggaggcg cgctgatgtt caccggcatc atccaggcca ccggtcgcgt
     1021 cacgcgcagc gaaccgcgcg gcggcgactt gcgcctcggc atcgtcgcgc ccgaattcga
     1081 tacgtccgat gtcatgcttg gcgacagcgt cgcggtgtcg ggctgctgcc tgaccgtggt
     1141 cgcacatgaa ggcgacaccc tggcgttcga catttccaac gaaagccttg ccctgaccac
     1201 gctgggcgat ctgggcatgg gtgaccgcgt aaatctggaa aaggcgctgc ggctttcgga
     1261 tcggctgggt ggccatctgg tgtcgggcca tgtcgacggc atcggcagca tcgtttccgt
     1321 cgaacccgac gcgcgttcac agcgctggat catcgaggca ccactggtac tcgcccgcta
     1381 cgtcgcggcc aagggatcgg tgtgcgtgga cggcgtcagc ctgacggtca acacggtgga
     1441 cggcgcgcgt ttcggcgtga acctgattcc gcatacggtc gagcagacca cgttcggcga
     1501 ccgccgtgtc ggcgatcgcg tgaatctcga gatcgacatg ctggcgcgct acgtcgagcg
     1561 gatgctcgca acgggagggc aatgacatgg ctttcgcgac cattcccgaa ctgcaggaag
     1621 agatcgccgc cggccggatg gtggtgatgc tggacgacga ggaccgcgag aacgagggcg
     1681 acctgatcat ggccgccgac aaggtgcgcg cggaggacgt caacttcatg gcgcgcgaag
     1741 gccgcggcct gatttgcctg gcgctggacc aggcgcgttg ccgccggctc ggcctgcagc
     1801 cgatggtgcg cgacaatgga tcggtctacc acaccaactt caccgtctcg atcgaggctg
     1861 ccagcggcgt caccaccggc atctccgcgc acgaccgcgc gcgcaccatc caggtggcgg
     1921 tggcatccgg ggcgaaagcc gccgatctgg ttcagccggg ccacgtgttc ccgctggaag
     1981 cgcaacccgg aggcgtattg acgcgcgccg gccataccga agccgccgtg gatttggcga
     2041 cgctcgccgg tcgcacgcct gccggcgtgc tggtggagat cctgcgcgaa gatggttcga
     2101 tggcgcggcg gccggacctc gaaaccttcg ccgccaagca cgggctcaag gtcggcagca
     2161 tcgccgacct gatccggcat cgcctcgcga cggaaaaaac catcgagcgc gtgcacgagt
     2221 cgggcgtcga aaccgaattc ggcgcgttcc gtttgatcgc atggcgcgac cgcttgcgcg
     2281 gcgacctgca tttcgcgctg gtgcgcggtg tggtcgaggg cgaccagccg gtgctgacac
     2341 gcgtgcatgt gcgcaacacc ttgtccgacg tgctgcatct cgagcgcgag gatctcggca
     2401 tgaccatgac cgcggcgctg cggcgcatcg cctccgaagg gcgtggcgtg gcggtggtgc
     2461 tgagttccga ggaagatgtc ggagtcctgc tcgcgcgcct gaaccacgac gccgcgtctg
     2521 cgcccgcgac ggggcgggct gcggcgcagc gcgaatggcg ccagctcggc cttggcgcac
     2581 agatcctcgc cgacctcggc gtgcatcgcc tgcgcgtact gggcacgccc cgcaagctgg
     2641 tcgggctgtc ggggttcgat ctcgaggtgg tcgaatatgt ggaagagcag ggcgcgggga
     2701 acaggaaata ggggcagcat ggttccgctg ttacgcttcc cgactcccga atcgaatccc
     2761 gcaacgccat gtcccgccaa accgccacgt cgccccccga ccttcactcg ccgtccggtg
     2821 cgcgttacgc cgtgatcgcc agccgctgga atggcgagat cgtcgacgag ctggtggccg
     2881 gtgcgcgccg tgctttcacc gcacatggcg tggccgagaa ggcgttcgac gtgctgcgcg
     2941 tgccgggtgc gtgggagttg ccgctggtcg cgaagcggct ggccgcgagc ggccggtacg
     3001 tggcggtcgt cgcgttgggc tgcgtggtgc gcggcgagac gcgtcactac gaacacgtgg
     3061 cggacgcgtg cgcgcgcgga ttgatgcgcg tcgcgctgga tgccggcgtg ccggtattga
     3121 atggcgtgct cgcggtcgag gacgaagccg acgcatgggc gcgcgcgggc ggtgcgcacg
     3181 gcaaca
//
LOCUS       DASSVL010000395         4112 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_574340, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000395 DASSVL010000000
VERSION     DASSVL010000395.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 4112)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4112)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4112
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_574340"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..186
                     /locus_tag="VFM52_06885"
     CDS             <1..186
                     /locus_tag="VFM52_06885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008572000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxo acid dehydrogenase subunit E2"
                     /protein_id="HET8764929.1"
                     /translation="ILGMHTIKERAIVENGQVIAAPMMYIAISYDHRIIDGKDAVLFL
                     VDIKNQLENPHKMLLGI"
     gene            324..1748
                     /gene="lpdA"
                     /locus_tag="VFM52_06890"
     CDS             324..1748
                     /gene="lpdA"
                     /locus_tag="VFM52_06890"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005913750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004148 - dihydrolipoyl dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA];
                     GO_process: GO:0045454 - cell redox homeostasis [Evidence
                     IEA];
                     GO_process: GO:0051068 - dihydrolipoamide metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HET8764930.1"
                     /translation="MSDKFDVIVIGAGPAGYVAAIRAAQLGLKTACIDAFAGKDGKQA
                     LGGTCLNVGCIPSKALLDSSRQFWNLAHNLPAHGISVKDAKVDMAAFIGRKDKIVKQF
                     TGGIGQLFKANKVTPFYGTGKLLKGNQVEITAADGSKQTISATNVVLASGSIPIELPF
                     AKFDGKAIVDNAGALDFTEVPKRLGVIGAGVIGLELGSVWRRMGSEVTIIEALPTFLG
                     ATDIDVAKIAAKEFAKQGLDIKLDAKLNKAEVKKDGVHLVYTTKDGEQKLVVDKLLVA
                     VGRRAYTKDLLADDTGVKLDERGRIVVDEHNHTGVDGVWAVGDAVRGPMLAHKGSEEG
                     VAVAEWIAGKAGHVNLDTIPFVIYTEPEVAWVGKSEQQLKAEGVPYKVGTFPFAAIGR
                     AVAMNEGVGQVKMLAHAETDRILGVHMVGPGVSELVAECVVAMEFKGSSEDLARIVHA
                     HPTLSEAVHEAALSVDKRAIHKGN"
     gene            1964..2560
                     /locus_tag="VFM52_06895"
     CDS             1964..2560
                     /locus_tag="VFM52_06895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008211769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00730 family Rossman fold protein"
                     /protein_id="HET8764931.1"
                     /translation="MPQPTSLCVYCGSNRGKHPEYAEKAQTFGSEMAKRGIRLVYGGG
                     NVGLMGVVADAVLAGGGEVTGVIPRQLVEHEVAHKGLTELVVVDTMHQRKTRMFELAE
                     AFVALPGGFGTMDEMFEMLTWAQLGLHRCPCAFLDVRGYYRDLRAMVDHMVAERFVRT
                     EQRDSVWFGEEIDALFDWMRDYQGGYQPKWIDRGSVHA"
     gene            2596..3594
                     /locus_tag="VFM52_06900"
     CDS             2596..3594
                     /locus_tag="VFM52_06900"
                     /EC_number="1.3.1.95"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008211770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016655 - oxidoreductase activity, acting
                     on NAD(P)H, quinone or similar compound as acceptor
                     [Evidence IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acryloyl-CoA reductase"
                     /protein_id="HET8764932.1"
                     /translation="MPSFRAFRIRNDGAGYRAGIETMASDDLTPGELLVKVAYSSVNY
                     KDALAGTGKGKILRRYPLNGGIDLAGHVVGSTDAAFKEGDAVLCTGSGLSETRDGGYA
                     EYARLDARWTIPLPAGLSLRDSMILGTAGFTAALALVHMQDNRQTPKHGPIAITGATG
                     GVGQLAVDIFSQAGYTVQAISGKPEHFDHLKALGAAECIDRRELAFSGKPLDSARFGG
                     VFDTVGGKLLAGLLPLVSPYGNVAICGNAGGFAFDATVMPFIIRGVNLLGVASAGTAR
                     DLRDRVWQHLADDWKPRHLDRILTREATLAELPDVFSHMLSGASFGRTLVRVADHP"
     gene            3660..4025
                     /gene="pilH"
                     /locus_tag="VFM52_06905"
     CDS             3660..4025
                     /gene="pilH"
                     /locus_tag="VFM52_06905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019464718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twitching motility response regulator PilH"
                     /protein_id="HET8764933.1"
                     /translation="MARILIVDDSPSQLLGLKRIVEKLGHEALTAEDGAAGVEVAKRE
                     IPDLILMDVVMPNLNGFQATRTISKDPTTAHIPVVLVTTKDQETDKVWGMRQGAKAYV
                     TKPVREEELATTLKELLPA"
BASE COUNT          739 a         1405 c         1323 g          645 t
ORIGIN      
        1 atcctcggca tgcacacgat caaggagcgc gccattgtcg agaacggcca ggtgatcgcc
       61 gcgccgatga tgtacatcgc gatcagctac gaccaccgca tcatcgacgg caaggacgcg
      121 gtgctgttcc tggtcgacat caagaaccag ctcgagaacc cgcacaagat gttgttgggt
      181 atctgagtcc tcgagcccct ctcccgccgg gagaggggtt ggggtgagga tccggcatcg
      241 ccgcaacgcc tcgctccgca cgtaccctca cccgccctcc gggcaccctc tcccgacagg
      301 agagggacaa agcgagaaac gacatgagcg acaaattcga cgtcatcgtc atcggcgccg
      361 gcccggccgg ctatgtggcc gcgatccgcg ccgcgcaact gggcctgaag accgcctgca
      421 tcgacgcctt tgccggcaag gacggcaagc aggcgctggg cggcacgtgc ttgaacgtcg
      481 gctgcatccc gtccaaggcg ctgctggact cctcgcgcca gttctggaac ctcgcgcaca
      541 acctgccggc gcacggcatc agcgtgaagg acgccaaggt cgacatggcc gcgttcatcg
      601 gccgcaagga caagatcgtc aagcagttca ccggcggcat cggccagttg ttcaaggcca
      661 acaaggtcac gccgttctac ggcaccggca agctgctcaa gggcaaccag gtggagatca
      721 ccgccgccga cggcagcaag cagacgatca gcgccaccaa cgtggtgctc gcctccggct
      781 cgatcccgat cgagctgccg ttcgccaagt tcgacggcaa ggcgatcgtc gacaacgccg
      841 gcgcgctcga cttcaccgaa gtgccgaagc gcctcggcgt gatcggcgcc ggcgtgatcg
      901 ggctggaact cggcagcgtg tggcgccgca tgggttcgga agtcaccatc atcgaggcac
      961 tgccgacctt cctcggcgcc accgatatcg acgtcgccaa gatcgccgcc aaggagttcg
     1021 ccaagcaggg cctggacatc aagctcgacg ccaagctcaa caaggccgag gtgaaaaagg
     1081 acggcgtgca tctggtctac accaccaagg atggcgagca gaagctggtg gtcgacaagc
     1141 tgctggtggc cgtgggccgc cgcgcctaca ccaaggatct cctggccgac gacaccggcg
     1201 tcaagctcga cgagcgcggt cgcatcgtgg tcgacgaaca caaccacacc ggcgtggatg
     1261 gcgtgtgggc cgtcggtgat gccgtgcgcg gcccgatgct ggcacacaag ggttcggagg
     1321 aaggcgtggc agtggccgag tggatcgccg gcaaggccgg ccacgtcaac ctggacacca
     1381 tcccgttcgt gatctacacc gagccggaag tggcctgggt cggcaagagc gagcagcagc
     1441 tcaaggcgga gggcgtgccg tacaaggtcg gcaccttccc gttcgccgcg atcggccgcg
     1501 ccgtggcgat gaacgagggc gtgggccagg tgaagatgct ggcccatgcc gagaccgacc
     1561 gcatcctcgg cgtgcacatg gtcggcccgg gtgtctccga gctggtcgcc gaatgcgtgg
     1621 tggcgatgga attcaagggt tcctccgagg acctcgcgcg catcgtccac gcgcatccga
     1681 ccttgtccga agccgtgcac gaagccgcgc tctcggtcga caagcgggcg atccacaagg
     1741 gcaactgatt ctccctgccc gttcggcgat ggcccgctcg tggcaacatg ggcgggccat
     1801 tttgcgtatg cggtgtgcat ccctgcactt cgcacgcgcg atcgcatcct tctgcaggaa
     1861 cccgcttgcg ggcgacctcc tcgtccgaga tccagggcag aagcatcgcc cgcaagcacg
     1921 ctcctgcaca cacgccattc cgtccaacta ccctggcaaa tcgatgcccc agcccacgtc
     1981 tctttgcgtc tattgcggtt ccaaccgcgg caagcacccc gaatacgccg agaaggcgca
     2041 gaccttcggc agcgagatgg ccaagcgcgg cattcgcctc gtctacggcg gcggcaacgt
     2101 cggcctgatg ggggtggtgg ccgatgcggt gcttgccggt ggcggcgagg tcaccggcgt
     2161 gatcccgcgc cagctggtcg agcacgaagt ggcgcacaag ggcctgaccg aactggtggt
     2221 ggtggacacc atgcaccagc gcaagacgcg catgttcgag ctggcggaag ccttcgtggc
     2281 cctgccaggc ggcttcggca cgatggacga gatgttcgag atgctgacct gggcgcaact
     2341 cgggctgcat cgctgcccct gcgccttcct cgacgtgcgc ggttactacc gcgacctgcg
     2401 cgcgatggtg gatcacatgg tcgccgagcg tttcgtccgc accgagcaac gcgacagcgt
     2461 gtggttcggc gaggagatcg acgccttgtt cgactggatg cgcgattatc agggcggcta
     2521 ccagcccaag tggatcgacc gcggcagcgt gcacgcctga gtcctgcccc ccgccatcgc
     2581 tcacaggagc accccatgcc cagctttcgc gccttccgca tccgcaacga cggcgccggc
     2641 tatcgtgccg gcatcgagac gatggccagc gacgacctga cgcccggcga gttgctggtg
     2701 aaagttgcct actcgtcggt caattacaag gacgcgctgg ccggcaccgg caagggcaag
     2761 atcctccgcc gttacccgct gaacggcggc atcgacctcg ccggccacgt cgtcgggtcc
     2821 accgacgccg cgttcaagga gggtgacgcg gtgctgtgca ccggcagcgg cctgtctgaa
     2881 acgcgcgacg gcggctatgc ggaatacgcg cggctcgacg ctcgctggac gatcccgctg
     2941 cccgccgggc tctccctgcg tgacagcatg atcctcggta ccgccggctt caccgcggcg
     3001 ctcgccctgg tgcacatgca ggacaatcgc cagacaccca agcacggccc catcgcgatc
     3061 accggcgcca ccggcggcgt cggccagctc gccgtcgata tcttcagcca ggctggctac
     3121 acggtgcagg cgatcagcgg caagccggag catttcgacc acctcaaggc gctcggcgcc
     3181 gccgagtgca tcgaccgccg cgagctcgcc ttcagcggca agccactgga ttccgcacgc
     3241 ttcggcggtg tgttcgacac tgtcggcggc aagctgctgg ccggcctgct gccactggtg
     3301 tcgccgtacg gcaacgtcgc gatctgcggc aacgccggcg gtttcgcgtt cgatgccacg
     3361 gtgatgcctt tcatcatccg cggcgtcaac ctgctcggcg tcgcctcggc cggcaccgcg
     3421 cgcgacctgc gcgaccgtgt gtggcagcac ctcgccgacg actggaagcc gcggcacctc
     3481 gatcgcatcc tcacccgcga agcgacgctc gcggagcttc cggacgtctt ttcgcacatg
     3541 ctgtccggcg cctcgttcgg ccgcacgctg gtgcgcgtgg ccgatcatcc gtgacccggc
     3601 ttggaagccc tgcaacacgg gcataaaatc ccggcaaccc acacggatac cgtttgtcta
     3661 tggctcgcat cctgatcgtc gacgattcgc cctcgcaact ccttggcttg aagcgcatcg
     3721 tcgaaaagct cggccatgag gcactcaccg cggaggacgg cgcggccggc gtcgaagtgg
     3781 ccaagcggga gatccccgac ctcatcctga tggatgtggt gatgccgaac ctcaacggct
     3841 tccaggccac gcgcacgatc agcaaggacc cgaccacggc gcacatcccg gtggtgctgg
     3901 tcaccaccaa ggaccaggaa accgacaagg tgtggggcat gcgccagggc gcgaaggcct
     3961 atgtcaccaa gccggtgcgc gaagaggagc tggccaccac gctaaaggaa ctgctgccgg
     4021 cctgagccgg tggcatgcgg tagagaaacg gcgcccctgg gcgccgtttt catttgccgt
     4081 tgcctcggca ctcaagctgg aaatccttct cc
//
LOCUS       DASSVL010000396         3459 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1026754,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000396 DASSVL010000000
VERSION     DASSVL010000396.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3459)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3459)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3459
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1026754"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2357)
                     /locus_tag="VFM52_06910"
     CDS             complement(<1..2357)
                     /locus_tag="VFM52_06910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007511510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HET8764934.1"
                     /translation="MLLKRKLLAAALLTAGIGATAGALAAPVPAQAAQDQTQDTTAPA
                     TTNKTDKKAADNKSKAQDMSSVTVNGFVSSIENATALKHNASTIVEAVSAEQVGKLPG
                     VSIADSLGRLPGLAVQQVSGRPQVLTIHGLGPDFSTALVNGGQQVSTSNNRDVQFDQY
                     PSSWFDNVVVHISPEADLIGQGLAGTVDMHTIRPLEKSGQEAAFNAHYIWNDMSELSP
                     GRGVSNTGYNVNGVWVNQFADHTLGITLGVDLENNPTQIQHQGPWGYASDANGDAVIG
                     GSKNYGITDSMKRNGILATVQWQPNEHYTGTLDVTYDAFKEVQQAKGIEFPLWWGNGG
                     VAPGPALTPGNVVNGFVQSGTYDNINAVIRNDYHATTARVYNLNWDNKFTINENWTID
                     AVANYSRATRRDINLESYSGSGYYYGSDAHLNADNNVTGTMGSPSATIGFDELSNGML
                     YVNPSLDYVNGMVLTDPQAWGSGNDVVQAGFINAPHTVDWLANFRLSAERSFTSGPIS
                     SMEFGVAYSKRNKTYHIDQDFLTLGGGTISGGNAVETAAFTGSSCNPLSWMGVSSQLC
                     YNPFDLIASGTLQPVPTFGSNTGTPPDWKVREKVLTPYLQMNLDTYLGGVSLRGNFGV
                     QMQHTSQRASGERVAPGSAITGNTITLIPVTGSTSYNKYLPSANLIFGFTDNDDLRVS
                     AARTLARPRMDQMNASLGVSGNITRLPNTDPNQSYFSANGGNPKLKPTMADNYNVSYE
                     HYFSGANGYDCNSNDAKNSDLCRTGAGYFALSGYFIKLHDYINPNS"
     gene            2797..>3459
                     /locus_tag="VFM52_06915"
     CDS             2797..>3459
                     /locus_tag="VFM52_06915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017356713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-amylase family glycosyl hydrolase"
                     /protein_id="HET8764935.1"
                     /translation="MSDTPWWRGAVIYQIYPRSFLDTDGDGVGDLPGIIERLDYVAAL
                     GVDAIWIAPFFRSPMADFGYDIADPCDVDPLFGTLADFDRLLAAAHARGLKVIIDQVP
                     SHTSAEHAWFKESRQDRVNPRADWYVWADAKPDGTPPNNWLSLFGGPAWSWEPRRGQY
                     YLHNFLASQPDLDFHHPAVRAAVLDNLRFWLERGVDGFRLDSINFCYHDAQLRDNPAK
                     PLA"
BASE COUNT          475 a         1077 c         1217 g          690 t
ORIGIN      
        1 gagttcgggt tgatgtagtc gtgcagcttg atgaagtagc ccgacagcgc gaagtagccg
       61 gcaccggtgc ggcacaggtc ggagttcttc gcgtcgttgg agttgcaatc gtagccgttg
      121 gcgcccgaga agtagtgttc gtagctgacg ttgtagttgt cggccatggt cggcttcagt
      181 ttcgggttgc cgccgttggc actgaagtag gactggtttg ggtcggtgtt cggcaggcgc
      241 gtgatgttgc cgctcacgcc gaggctcgcg ttcatctggt ccatgcgcgg gcgggccagg
      301 gtgcgcgcgg cgctgacgcg cagatcgtcg ttgtcggtga agccgaagat caggttggcg
      361 ctcggcaggt acttattgta gctggtgctg cccgtgaccg ggatcagcgt gatcgtgttg
      421 ccggtgatcg cgctgcccgg cgccacccgc tcgccggacg cgcgctgcga ggtgtgctgc
      481 atctgcacgc cgaagttgcc gcgcaggctg acgccgccga ggtaggtgtc caggttcatc
      541 tgcaggtacg gggtcaggac cttctcgcgc accttccagt ccggcggcgt gccggtgttg
      601 gagccgaagg tcggcaccgg ctgcagcgtg ccgctggcga tcaggtcgaa cgggttgtag
      661 cagagttgcg agctcacgcc catccacgac agcgggttgc agctgctgcc ggtgaacgcc
      721 gcggtctcca ccgcgttgcc gccgctgatg gtgccgccgc ccagggtcag gaagtcctgg
      781 tcgatgtggt aggtcttgtt gcgcttgctg tacgccacgc cgaactccat gctggagatc
      841 gggccgctgg tgaagctgcg ctccgccgac aggcggaagt tggccagcca gtcgacggtg
      901 tgcggcgcgt tgatgaagcc ggcctgcacc acgtcgttgc ccgaacccca ggcctgcggg
      961 tcggtcagca ccatgccgtt gacgtagtcg agcgacgggt tgacgtacag catgccgttg
     1021 ctgagctcgt cgaacccgat cgtggcgctg gggctaccca tcgttcccgt cacgttgttg
     1081 tccgcattga gatgggcatc ggagccgtag tagtaaccgc tgccggaata gctctcgagg
     1141 ttgatgtcac gccgcgtcgc ccgcgagtag ttggcgaccg cgtcgatcgt ccagttctcg
     1201 ttgatggtga acttgttgtc ccagttgagg ttgtacacgc gcgcggtggt ggcgtggtag
     1261 tcgttgcgaa tcacggcgtt gatgttgtcg taggtgccgc tctgcacgaa gccgttcacc
     1321 acgttgcccg gggtcagtgc cggaccgggc gcgacgccgc cgttgcccca ccacagcggg
     1381 aactcgatgc ccttcgcctg ctgcacttcc ttgaacgcgt cgtaggtcac gtcgagggtg
     1441 ccggtgtagt gctcgttcgg ctgccactgc acggtggcga ggatgccgtt gcgcttcatc
     1501 gagtcggtga tgccgtagtt cttcgagccg ccgatcacgg cgtcgccgtt cgcgtcggag
     1561 gcgtagcccc acggcccctg gtgctggatc tgggtcgggt tgttctccag gtcgacgccc
     1621 agcgtgatgc cgagggtgtg gtcggcgaac tggttcaccc acacgccgtt gacgttgtag
     1681 ccggtgttgc tcacgccacg gccgggcgac agctcggaca tgtcgttcca gatgtagtgc
     1741 gcgttgaacg ctgcttcctg gccgctcttt tccagcgggc ggatggtgtg catgtcgacc
     1801 gtgccggcga ggccctggcc gatcaggtca gcctccggcg agatgtgcac caccacgttg
     1861 tcgaaccagc tcgacgggta ctggtcgaac tgcacgtcgc ggttgttgga ggtggagacc
     1921 tgctggccgc cgttgaccag cgcggtggag aagtccgggc ccaggccgtg gatggtcagc
     1981 acctgcgggc ggccggaaac ctgctgcacg gcgaggccgg gcaggcgacc cagcgaatcg
     2041 gcgatcgaca cgcccggcag cttgccgacc tgctcggccg acaccgcctc gacgatggtg
     2101 ctggcgttgt gcttgagcgc ggtggcgttc tcgatgctgc tgacgaagcc gttgactgtc
     2161 accgacgaca tgtcctgcgc cttcgacttg ttgtcggcgg ccttcttgtc ggtcttgttg
     2221 gtggtggcgg gcgcagtggt gtcctgcgtc tggtcctgcg cggcttgcgc cgggaccggt
     2281 gcggcaaggg cgccggcggt ggcgccgatg cctgcggtga gcagcgctgc ggcaagcagc
     2341 ttgcgtttca gtagcatgtt cggtctcccc acgaaatagc gatgccgtct tgcggcgcgt
     2401 gccggatgcg catcccgcgt tgccggcgtg tttcggccgt gtttcggccg tgtgaatgca
     2461 tggtagggcc ggggtttcgc gccgcatcgt ttgtgcatac gtattcattg cgcggcctcg
     2521 ccggcgttgc tgcgacgcca cacgcgaggc cgcgcaaccc gcgccaggag caggcgattc
     2581 gccctcgcgc ggcatcctgc cgtggtttcc gccgtggccg gcaaaatgga gatggacgtc
     2641 cagacgtccg tttgttccag cgggcatgtc gcgggtgcag catgcatgaa tacgtatgca
     2701 cgtttccgct ggccgccgcg gcgctgccct aagctgggtg ccgttttcag ggcagtggcg
     2761 cggatcgccg cgcgcttcgc cggaccgggg ccagcaatga gtgacacacc atggtggcgc
     2821 ggtgccgtca tctaccagat ctatccgcgc agtttcctcg acaccgacgg tgacggggtc
     2881 ggcgacctgc cgggcatcat cgaacggctg gattacgtcg ccgcgctcgg cgtggacgcg
     2941 atctggatcg cgccgttctt ccgctcgccg atggccgatt tcggctacga catcgccgat
     3001 ccgtgcgacg tcgacccgct gttcggcacg ctcgcggatt tcgaccgcct gctggccgcc
     3061 gcgcatgcgc gcgggctcaa ggtcatcatc gaccaggtgc ccagccacac ctcggccgag
     3121 cacgcgtggt tcaaggaaag ccggcaggat cgcgtgaacc cgcgcgccga ctggtacgtg
     3181 tgggcggacg ccaaacccga cggcacgccg ccgaacaact ggctgtcgct gttcggcggc
     3241 ccggcgtgga gctgggagcc gcgccgcggg cagtactacc tgcacaattt cctcgccagc
     3301 cagccggatc tcgatttcca ccacccggcc gtgcgcgcgg cggtgctcga caacctccgg
     3361 ttctggctgg agcgcggcgt ggacggcttc cgtcttgatt cgatcaactt ctgctaccac
     3421 gatgcgcagc tgcgcgacaa cccggccaag ccgctggcg
//
LOCUS       DASSVL010000397         2507 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_164572, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000397 DASSVL010000000
VERSION     DASSVL010000397.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2507)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2507)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2507
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_164572"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..331
                     /locus_tag="VFM52_06920"
     CDS             <1..331
                     /locus_tag="VFM52_06920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="PepSY domain-containing protein"
                     /protein_id="HET8764936.1"
                     /translation="WLAVTAQLHKKQNLTVPERKLRPPVEPAAQPAQAAAASPVGRPA
                     PTPRRGTNPRHLLPLKIFVALVALALALSTLSGLYMSWRHTRHAGRLATIFAAGIAVP
                     VVLILLQ"
     gene            complement(359..1228)
                     /locus_tag="VFM52_06925"
     CDS             complement(359..1228)
                     /locus_tag="VFM52_06925"
                     /EC_number="6.5.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019397462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003910 - DNA ligase (ATP) activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA ligase"
                     /protein_id="HET8764937.1"
                     /translation="MPATMRWMAMVLLAWAWLLPGHAASVPPVELVDVYRGDLDLSRY
                     WVSEKFDGVRGYWDGHRLLTREGTVVRVPAWFTRGWPTTPMDGELWAGYRRFERASTI
                     VRSAAANDPAWREISYRVFDLPGHTGDFDARVPAIRRVVAAIKVPWVVAVDQFHVADA
                     AQLDAALQRVLARGGEGLVLHRGDARYQAGRNAGLFKLKPYEDAEARVVAIRPGKGRL
                     QGRMGAIEVRTPDGRRFAIGSGFSDADRADPPPIGSWVTYRFNGRTRSGLPRFARFLR
                     RRPGGPPPEVAGR"
     gene            1650..2411
                     /locus_tag="VFM52_06930"
     CDS             1650..2411
                     /locus_tag="VFM52_06930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015446400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015288 - porin activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TorF family putative porin"
                     /protein_id="HET8764938.1"
                     /translation="MPQSDAWRRTLLAAALLLAVAVRADEAPAVTWNGSLALTSDYRF
                     RGLTQTGGDPALQAGLETDFPGGAYLGAWASNVSWLAASSTPAHPVSNSLELDLYAGR
                     RGAFGNGATWDVGVYAYTYPGHYPRDQPSPQTLEGYAALGWKTLTLKYSRSIGNLFGV
                     AASRGSHYTETAWQQPLGATWALAAHLGHQDVAGHRAADYTDWKLGISHTWGTAWTIE
                     LDWCDTNARRAAYTDPQGRYLGRATALLTVTRAWH"
BASE COUNT          387 a          984 c          812 g          324 t
ORIGIN      
        1 ctggctggcg gtgacggcgc aactgcacaa gaagcagaac ctcaccgtgc cggagcgcaa
       61 gctgcgcccg ccggtcgaac cggccgcgca gccagcacaa gccgccgccg caagtccagt
      121 cggtcgccct gccccgacgc cccggcgcgg cacgaatccg cggcatctgc tgccgctgaa
      181 aatcttcgtg gcgctggtgg cgctggcctt ggcgctgtcc acgctgagcg ggctgtacat
      241 gtcctggcgc cacacccgcc acgcgggccg gctcgccacc atcttcgccg ccggcatcgc
      301 ggtgccggtg gtgctgatcc tgctgcagtg agtcggcggc aggtggcgcc accgcggctc
      361 agcgaccggc cacctcgggt ggcggcccgc ccggccgccg gcgcaggaaa cgcgcaaacc
      421 gcggcaggcc gctgcgcgtg cggccgttga agcggtaggt cacccatgag ccgatcggcg
      481 gcgggtccgc ccggtcggcg tcggagaacc ccgagccgat cgcgaaccgg cgcccgtccg
      541 gcgtgcgcac ctcgatcgcg cccatgcggc cctgcagccg gcccttgccc gggcggatgg
      601 cgacgacccg ggcctcggcg tcctcgtacg gtttcagctt gaacaggccg gcgttgcggc
      661 cggcctgata ccgggcgtcg ccccggtgca gcaccagccc ttccccgccc ctggccagca
      721 cgcgctgcaa cgcggcgtcg agctgcgccg cgtcggccac gtggaactga tccaccgcga
      781 cgacccacgg taccttgatc gccgcaacga cacggcggat cgccggcacc cgcgcgtcga
      841 agtcccccgt gtggcccggc aaatcgaaca cgcgatagct gatctcgcgc cacgccggat
      901 cgttcgccgc ggccgaccgc acgatggtcg aagcccgttc gaaacgcctg taacccgccc
      961 acaactcgcc gtccatcggc gttgtcggcc agccgcgcgt aaaccacgcc ggcacgcgca
     1021 ccaccgtgcc ctcgcgcgtc agcaaccggt ggccgtccca gtaaccacgc acgccgtcga
     1081 acttctcgct gacccaatag cgcgacaggt cgagatcgcc acggtagacg tccaccagct
     1141 cgaccggcgg cacgctggcg gcgtggcccg gcagcagcca cgcccacgcc agcaacacca
     1201 tcgccatcca gcgcatcgtg gcaggcatgc gggccagctc ccgtcgaaaa ccgcgatggt
     1261 cgagcgccgc gcggtaagcc gccatcggcg cacggcccct gaccggcggc gcaacgcccc
     1321 gccgcacgtc ggccattccc tacgaggcca gcggcgaggg atcgacgtgg ccgcccgaca
     1381 tcgttggccg atgcgtcgac cacgcaccga tcgatggtcg ccatgcgaat accgcatggc
     1441 cgccgccgca agccgcgtac ccccgcgtgg tgcgacgttt tcccccgcgt agtgcgtccg
     1501 gcggcgtccg cgcccgccaa tgccttgcac cagccgcgcg acggccttgg tccgggtctt
     1561 gctgatgcgc tggtcgggcg gaacccctcc gcggcaccgc ttccgtccgc gccctgcacg
     1621 gcgcccgccg catcacggag caccatgcta tgccccaatc cgacgcctgg cggcgaacct
     1681 tgttggccgc tgccctgctg ctggcggtcg cggttcgcgc cgacgaggcg cctgccgtga
     1741 cctggaacgg cagcctcgcg ctgaccagcg actaccgctt ccgtggcctc acccagaccg
     1801 gcggcgaccc ggcgctgcaa gccggactgg aaaccgactt ccccggtggt gcatatctcg
     1861 gcgcctgggc cagcaacgtg agttggctgg ccgccagttc gacgcctgca catccggtat
     1921 cgaacagcct ggaactcgac ctgtatgccg gccggcgcgg cgccttcggc aacggcgcca
     1981 cctgggacgt aggggtgtac gcctacacct atcccggcca ctacccgcgc gatcagccca
     2041 gcccgcaaac gctggaaggc tatgccgcgc tgggctggaa aaccttgacg ctgaaatact
     2101 cgcgcagcat cggcaacctg ttcggcgtgg ccgccagtcg cggcagccac tacacggaga
     2161 cggcgtggca gcaaccgctg ggcgcgacgt gggcactcgc cgcgcacctg ggccatcagg
     2221 acgtggccgg ccatcgcgcc gcggactaca ccgactggaa actcggcatc agccatacgt
     2281 ggggaaccgc gtggaccatc gagctggact ggtgcgacac caacgcccgc cgcgccgcct
     2341 acaccgaccc ccaaggccgc tatctcggcc gcgccacggc actgctgacc gtcacccgcg
     2401 cgtggcacta gagacgccga tgtgcgaccc ggcgcaggca gcgcaccacc acgccgcgac
     2461 gggtcgcccg gacatcggtt ggcgacctca cttcttcgac acgaacc
//
LOCUS       DASSVL010000398         2524 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1308287,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000398 DASSVL010000000
VERSION     DASSVL010000398.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2524)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2524)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2524
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1308287"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..428)
                     /locus_tag="VFM52_06935"
     CDS             complement(<1..428)
                     /locus_tag="VFM52_06935"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017462523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MsnO8 family LLM class oxidoreductase"
                     /protein_id="HET8764939.1"
                     /translation="MIPFSLLDLAPITVGSDATQAFRNMRDLAQLADRLGYTRYWLAE
                     HHNMPGIASAATAVLIGDVAAATTRIRVGAGGIMLPNHSPLQVAEAFGTLAALHAGRI
                     DLGLGRAPGTDQATARALRRYFASADAFPQDVAELLEFLAP"
     gene            complement(610..795)
                     /locus_tag="VFM52_06940"
     CDS             complement(610..795)
                     /locus_tag="VFM52_06940"
                     /inference="COORDINATES: protein motif:HMM:NF021321.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidoreductase-like domain-containing protein"
                     /protein_id="HET8764940.1"
                     /translation="MLIVDLPKLPVNDPKPVPPPEPDPADCCGEGCVPCVYDRYDEEV
                     ERYKADLAAWQARHPGE"
     gene            727..2007
                     /locus_tag="VFM52_06945"
     CDS             727..2007
                     /locus_tag="VFM52_06945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008209216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 18 protein"
                     /protein_id="HET8764941.1"
                     /translation="MRLRRRHRLRVVHRKLGQVDDQHAGSVSRTASTLRWREARAAAM
                     IPPATTGKPVVPPARLPSIAWMLIAVATLLSARAPDAHAADRYRVVAYDLAQHPIGGA
                     DLGRIDVLNFAFATVVDGRPALDAKAQQALAGRIALKATHPKVKVVISVGGWGAGGFS
                     EAAATAAGRERFAAGAADLIAASHADGLDVDWEYPGHHESGIASSPHDRANFTALMTA
                     LRGALDAAGAKAGEHYLLTIAAADGPFVDGIDIPAVAPQLDWFNLMTYDFCNAMTPET
                     CHHAGLHASKLAPADARTTDRAVAQFLSAGVPSRKLVIGAAFYGREFGGVNPSHDGLY
                     QRYEKFIAFVPWPKLKAGFIGKHGFVRHWDAQADAPWLWNASTRTFISYEDLQSLAAK
                     AAFVKMHHLGGIMYWEQSLDPEGELLEATWRGLQ"
     gene            complement(2057..>2524)
                     /locus_tag="VFM52_06950"
     CDS             complement(2057..>2524)
                     /locus_tag="VFM52_06950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8764942.1"
                     /translation="DRASHIWDKLEKDPAYAALAQSIWAQHFSLGPGMPTPAQLRKLT
                     AEQIARASAAVAKLRKRHVEVIFVRTPSAGQYLVFEDKLFPRAQTWDVLLARTGAPGV
                     HFQDHPELQGLWLPEWSHLATRDAVRFTGALYRIIEHGTGHQIAGVAAKPLAR"
BASE COUNT          398 a          900 c          834 g          392 t
ORIGIN      
        1 ggcgcgagaa actccagcaa ctcggcaacg tcctgcggaa acgcatccgc gctggcgaaa
       61 tagcggcgca gcgcgcgcgc cgtcgcctgg tcggtgcccg gcgcacggcc caggccaagg
      121 tcgatgcggc cggcgtgcaa ggccgccagc gtgccgaatg cctcggccac ctgcagcggc
      181 gaatggttcg gcagcatgat gccgccagcc ccgacgcgga tgcgcgtggt ggccgcggcc
      241 acgtcgccga tcagcaccgc cgtcgcggcg ctcgcgatgc cgggcatgtt gtggtgctcg
      301 gccagccagt agcgggtgta gccgagccgg tcggccagtt gcgcgagatc gcgcatgttg
      361 cggaacgcct gcgtggcgtc gctgcccacc gtgatcggcg ccaggtccag caaggaaaac
      421 ggaatcatca ctgccaccac acttcgtcag gtggttcggc cacttcgcac cgcgcgcccg
      481 ccacgactgg cgcaaggccc cgtcatgcga tgtcgccgaa accggttcgc ggccgccgtc
      541 acggcgcgcc gcatgctgca agcctacatc gtggggcaac tgcggccgcc tgacttgcgg
      601 caggcgcagt tattcgcccg ggtgccgcgc ctgccacgcc gcgagatcgg ccttgtagcg
      661 ctccacttcc tcgtcgtagc ggtcgtacac gcacggcacg cagccctcgc cgcagcaatc
      721 ggccggatcc ggctccggcg gcggcaccgg cttcgggtcg ttcacaggaa gcttgggcag
      781 gtcgacgatc agcatgcagg cagtgtatcg cgcactgcgt ccacgctgcg ttggcgcgaa
      841 gcgcgggcgg ctgcgatgat ccccccagcc accaccggga aacctgtcgt gccacctgcc
      901 cgcctgccgt cgatcgcctg gatgctcatc gccgtcgcca ccttgctgtc cgcccgcgca
      961 ccggacgccc acgccgccga ccgctaccgc gtcgtcgcct atgacctggc gcagcatccg
     1021 atcggcggtg ccgacctcgg gcgcatcgat gtgttgaact tcgcgtttgc caccgtcgtc
     1081 gacggccgtc cggcgctgga tgcgaaggcg cagcaggcgc tggccggccg cattgcgctg
     1141 aaggcaacgc atccgaaagt caaggtggtg atctcggtcg gcggctgggg cgccggtggc
     1201 ttttccgagg cggcggcaac cgcagccggg cgcgaacgct tcgccgcggg cgccgccgac
     1261 ctcatcgccg ccagccatgc cgacggtctc gacgtggatt gggaataccc cggccaccac
     1321 gagtccggca tcgcctccag cccgcacgac cgcgcgaact tcaccgcctt gatgacggcg
     1381 ctgcgcggtg cgctggacgc cgcgggcgcg aaggccggtg agcactatct gctgaccatc
     1441 gccgcggccg acggcccgtt cgtcgatggc atcgacatcc ccgctgtagc gccgcaactc
     1501 gactggttca atctgatgac ctacgacttc tgcaacgcga tgacgccgga gacctgccac
     1561 cacgcgggcc tgcacgcgtc gaaactggcg ccggcagacg cacgcaccac cgatcgcgct
     1621 gtcgcacaat tcctttcggc cggcgtgccc tcgcgcaagc tggtaatcgg cgccgccttc
     1681 tatggccgcg agttcggcgg cgtgaaccca tctcatgacg gtctgtacca gcggtacgag
     1741 aagttcatcg cattcgtgcc ctggccgaag ctgaaggccg gcttcatcgg caagcacggt
     1801 ttcgtacgtc actgggacgc ccaagccgac gcgccgtggc tgtggaacgc cagcacgcgc
     1861 accttcatca gctacgaaga cctccagtcg ctcgccgcca aggcggcttt cgtgaaaatg
     1921 caccacctcg gcggcatcat gtactgggag cagagcctcg atcccgaggg cgaactgctc
     1981 gaagcgacct ggcgcggctt gcagtaaggc gtcgcaccgc ggcttcgcat agacggcgca
     2041 acgatgggac gggcgctcaa cgcgccagcg gcttggccgc gacgccggca atctggtgcc
     2101 cggtgccatg ctcgatgatc cggtacagcg ctccggtgaa gcgcaccgca tcgcgcgtgg
     2161 ccaggtgcga ccactccggc aaccagaggc cctgcaattc cgggtgatcc tggaagtgca
     2221 cgccgggcgc gccggttctc gccagcaaca cgtcccaggt ttgcgcgcgc gggaagagct
     2281 tgtcctcgaa taccaagtat tggcctgcgc tcggcgtgcg cacgaagatc acttccacgt
     2341 ggcgcttgcg cagcttcgcg accgcggccg acgcacgagc gatctgttcg gcagtgagct
     2401 tccgcaactg cgcaggcgtc ggcatgccgg ggcccagcga aaagtgctgc gcccagatgc
     2461 tctgcgccag cgcggcatag gccggatctt tttcgagctt gtcccagatg tggctggccc
     2521 ggtc
//
LOCUS       DASSVL010000399         2133 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1238228,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000399 DASSVL010000000
VERSION     DASSVL010000399.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2133)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2133)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2133
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1238228"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..563
                     /locus_tag="VFM52_06955"
     CDS             <1..563
                     /locus_tag="VFM52_06955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015448514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="flagellar hook-basal body complex protein"
                     /protein_id="HET8764943.1"
                     /translation="VTADGYPIEPAITLPQGVQSITIGNDGTISATVPGQAAPVQVGS
                     LHQDQNGQIVTADGYPIEPAITLPQGAQSITIGTDGTVSATLAGQAAPQQIGNIQLAD
                     FINPAGLQSMGQNLYLETASSGAPQTGQAGLNGMGTLLQGSLESSNVDIVEAMVDMIQ
                     TQRTYEMNSKSISAADGMLQTITNKT"
     gene            575..1246
                     /gene="flgH"
                     /locus_tag="VFM52_06960"
     CDS             575..1246
                     /gene="flgH"
                     /locus_tag="VFM52_06960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019464394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009427 - bacterial-type flagellum basal
                     body, distal rod, L ring [Evidence IEA];
                     GO_function: GO:0003774 - cytoskeletal motor activity
                     [Evidence IEA];
                     GO_process: GO:0071973 - bacterial-type
                     flagellum-dependent cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body L-ring protein FlgH"
                     /protein_id="HET8764944.1"
                     /translation="MHVSPFSARLAIVLAAVALTGCAGLQPRHDDAEWAATAPVAPAA
                     PAADGSIYHDAQNMELFADPRAHRTGDILTIVLVENTQAVKKANTSTSKTDKDKIGAP
                     SLLGKTFNKAAIGTDAERSFAGGGSSSQSNTLTGNITVTVAQRLPNGNLLVRGEKLLT
                     INQGQEQIRIAGIVRPQDIGPDNTVPSTRVADAKIGYTGRGSLADSNTQGWLSRFFNS
                     KWMPF"
     gene            1249..>2133
                     /locus_tag="VFM52_06965"
     CDS             1249..>2133
                     /locus_tag="VFM52_06965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019337416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009428 - bacterial-type flagellum basal
                     body, distal rod, P ring [Evidence IEA];
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0071973 - bacterial-type
                     flagellum-dependent cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body P-ring protein FlgI"
                     /protein_id="HET8764945.1"
                     /translation="MKIHASLVPALATVALGLLLTLGVATPAHADRIGDLTSIGGVRS
                     NQLIGYGLVVGLDGSGDQTTQAPFTTQSLENMLEQFGVNVPPNVRPQLKNAAAVTITA
                     ELPPFAKPGQAIDVTVASIGNAKSIRGGELLMAPLRGADGNVYAIAQGSVIVGGINAS
                     GKSGSSVQKNISASGRIPNGATVERAVASAFAGAEALHLNLNTPDFTTAARIVGAINR
                     TYGAGTAHAVDGGTVEVRVPQDPTQKVAWLGAIQALDVAPGAPPARVVVNSRTGTVVI
                     GSDVRVSAAAVAPGAIQVT"
BASE COUNT          373 a          827 c          675 g          258 t
ORIGIN      
        1 tcgtcaccgc cgacggctac ccgatcgaac cggcgatcac cctgccgcag ggcgtgcaga
       61 gcatcaccat cggcaacgac ggcacgatca gcgccaccgt gccggggcag gccgcgccgg
      121 tgcaggtggg ctcgctgcac caggaccaga acggccagat cgtcaccgcc gacggctacc
      181 cgatcgagcc ggcgatcacc ctgccgcagg gcgcgcagtc gatcaccatc ggcaccgacg
      241 gcacggtcag cgccacgctc gccggccagg ccgcgccgca gcagatcggc aacatccagc
      301 tcgcggattt catcaatccc gccggcctgc agtcgatggg ccagaacctg tacctggaaa
      361 ccgcgtccag cggcgcgccg cagaccggcc aggccgggct gaacggcatg ggcacgctgc
      421 tgcagggctc gctggagtcg tccaacgtcg acatcgtcga ggcgatggtc gacatgatcc
      481 agacccagcg cacctacgag atgaactcca agtcgatcag cgccgccgac ggcatgctgc
      541 aaaccatcac caacaagacc tgaggcacgc cgccgtgcac gtttccccgt tttccgcccg
      601 ccttgccatc gtgctcgccg cggtcgcgct caccggctgc gccgggctgc agccgcggca
      661 cgacgacgcc gaatgggccg cgaccgcgcc ggtcgccccg gcggcgccgg ccgccgacgg
      721 ctcgatctac cacgacgcgc agaacatgga gctgttcgcc gacccgcgcg cccaccgcac
      781 cggcgacatc ctcaccatcg tgctggtcga gaacacccag gcggtgaaga aggccaacac
      841 cagcaccagc aagaccgaca aggacaagat cggcgcgccg agcctgctgg gcaagacctt
      901 caacaaggcc gcgatcggca ccgatgccga gcgcagcttc gccggcggcg gatcgagcag
      961 ccagagcaac acgctcaccg gcaacatcac cgtcaccgtc gcccagcggt tgccgaacgg
     1021 gaacctgctg gtgcgcggcg aaaagctgct caccatcaac cagggccagg agcagatccg
     1081 catcgccggc atcgtgcgcc cgcaggacat cggcccggac aacaccgtgc cgtccacccg
     1141 cgtcgccgac gccaagatcg gctacaccgg ccgcggctcg ctcgccgact ccaacaccca
     1201 gggctggctg tcgcgcttct tcaactccaa gtggatgccg ttctagccat gaaaatccac
     1261 gcctccctcg tccccgccct cgccaccgtc gcactcggcc tgctgctgac cctgggcgtc
     1321 gcgacccccg cccatgccga ccgcatcggc gacctcacct cgatcggcgg cgtgcgctcc
     1381 aatcagctga tcggctatgg cctcgtcgtc ggcctcgacg gctcgggcga ccagaccacg
     1441 caggcgccgt tcaccaccca gagcctggag aacatgctcg aacagttcgg cgtcaacgtg
     1501 ccgccgaacg tgcgcccgca gctcaagaac gcggcggcgg tcacgatcac cgccgagctg
     1561 ccgccgttcg ccaagcccgg tcaggcgatc gacgtcaccg tggcttcgat cggcaacgcc
     1621 aagagcatcc gcggcggcga attgctgatg gcgccgctgc gcggcgcgga cggcaacgtg
     1681 tacgccatcg cgcagggcag cgtgatcgtc ggcggcatca acgccagcgg caagagcggt
     1741 tccagcgtgc agaagaacat ctccgccagc gggcgcatcc cgaatggcgc gacggtggag
     1801 cgcgcggtgg cgtccgcgtt cgccggcgcc gaggccctgc acctgaacct caacaccccg
     1861 gatttcacca ccgccgcgcg catcgtcggc gcgatcaacc gcacctacgg cgccggcacc
     1921 gcgcacgcgg tcgacggcgg cacggtcgag gtgcgcgtgc cgcaggaccc gacccagaag
     1981 gtcgcctggc tcggcgcgat ccaggcgctc gacgtcgcgc ccggcgcgcc gccggcccgc
     2041 gtcgtggtca actcgcgcac cggcaccgtg gtgatcggct ccgacgtgcg cgtgtccgcg
     2101 gcggcggtcg ccccgggcgc gatccaggtc acc
//
LOCUS       DASSVL010000400         2544 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_107548, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000400 DASSVL010000000
VERSION     DASSVL010000400.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2544)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2544)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2544
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_107548"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1168)
                     /locus_tag="VFM52_06970"
     CDS             complement(<1..1168)
                     /locus_tag="VFM52_06970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014403306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug effflux MFS transporter"
                     /protein_id="HET8764946.1"
                     /translation="MTSRLLGAALVLGLLSAVGPFAIDMYLPALPDIQHGLHTDVAGA
                     QASLMAFFVAAGLGQVAYGPLSDMFGRKPPLYFGLGVFVLASIGCALAPDIHTLIAFR
                     FLQGLGACAGMVIPRAVVRDLYTGVDAARLMALLMLVFSVSPILAPLTGSLVIQLASW
                     RGIFWVVAAVAVLGVALVRLALIETRPPAQRVNSSVRSALAAYRVLVRDRTFIGLVFI
                     GACGTASFFTYLANSSFVLIEHYGLSPTQYSLAFSINAASFIGAAQCTGWLGTRYGLR
                     RVVRAAVVGHVVAMVGLLGLFLAGFDHLGLLIGLLLIGYGFLGLTIPITAVLALDRHG
                     PIAGTASALMGTLQFVTGAMVIAVVAQFAGGGALTMVAGIAGCATAAFVLVRLTL"
     gene            1406..1873
                     /locus_tag="VFM52_06975"
     CDS             1406..1873
                     /locus_tag="VFM52_06975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008213115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC family protein"
                     /protein_id="HET8764947.1"
                     /translation="MDTSADSDRIERQIILAAARSKVWHALVDAEAFGDWFGVALKGQ
                     RFVVGETARGHITYPGYEHLMCEMQVVQIEPERRFAYRWHPYAVDPAMDYAREPTTLV
                     EFTLEDHADGILLRVVESGFDRIPLARRAEAYRMNSGGWDQQMQNIHAYLAGH"
     gene            1881..2210
                     /locus_tag="VFM52_06980"
     CDS             1881..2210
                     /locus_tag="VFM52_06980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007809277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HET8764948.1"
                     /translation="MPRSPAWQKSAPVFAALGDPTRLHLLAALCAGGALSIAQLTAGT
                     AISRQAVTKHLQVLAGAGLVRDDWQGRERLWELEPSRLAEAQRALDAIATQWDQALLR
                     LKCVVER"
BASE COUNT          467 a          902 c          850 g          325 t
ORIGIN      
        1 gcagcgtcag gcgcaccagc acgaaggcag cagtggcgca gccggcaatg ccggcgacca
       61 tcgtcagcgc gccgccgccg gcgaattgcg cgacgacggc aatcaccatc gcaccggtca
      121 cgaactgcag ggtgcccatc aaggccgatg ccgtgccggc aatcgggccg tggcggtcga
      181 gcgccagcac cgccgtgatc ggaatcgtca ggccgagaaa accgtagccg atcagcagca
      241 gcccgatcag caggccgaga tggtcgaagc ctgcgaggaa cagccccagc aggccaacca
      301 tcgccaccac gtggccgacg accgcggcgc gcaccacccg gcgcaagccg taacgcgtgc
      361 cgagccagcc ggtgcattgc gccgcgccga tgaacgacgc cgcgttgatc gaaaacgcca
      421 ggctgtactg cgtcggcgac aggccgtagt gctcgatcag cacgaacgac gaattggcga
      481 ggtaggtgaa aaaactggcg gtgccacagg cgccgatgaa caccaggccg atgaaggtgc
      541 ggtcgcgcac gagcacgcgg tacgccgcca gcgccgaacg cacactgctg ttcacccgct
      601 gcgccggcgg ccgggtctcg atcagcgcca accgcaccag cgccacgccg agcacggcga
      661 cggcggccac cacccagaaa atgccgcgcc aactggcgag ctggatgacc aggctgccgg
      721 tcagcggcgc gaggatcggc gacacgctga acaccagcat cagcagcgcc atcagccgcg
      781 ccgcgtcgac gccggtgtac aggtcgcgca ccacggcacg cgggatcacc atgccggcac
      841 aggcgcccag cccctgcagg aaccggaacg cgatcaaggt gtggatatcc ggcgccagcg
      901 cgcagccgat gctggccagc acgaacacgc cgaggccgaa gtacagcggc ggcttgcggc
      961 cgaacatgtc cgacagcggc ccgtacgcca cctggcccaa cccggccgcg acgaaaaacg
     1021 ccatcaggct ggcctgcgca ccggccacgt cggtatgcag gccatgctgg atgtccggca
     1081 gcgccggcag gtacatgtcg atcgcgaacg ggccgactgc cgacagcagg ccgagcacca
     1141 gcgccgcgcc gagcaggcgg gaggtcatgc ggaacctcga tgaagaagcg ggagaagaac
     1201 gggcacccgg cagacggcgt gtcaaggcgc cgaatcgccc ggggtcggcc atgttaaacc
     1261 accggatgcg gagaccggct tgccgccagt gcggacatgc gcactgccgc cacgccgttc
     1321 acatgcaact ttccggttgc gtttcttccc gggccgttcc aatatgcaac ttcaaggttg
     1381 cgccttcccg cgacggagat tccccatgga caccagtgca gacagcgatc gcatcgaacg
     1441 gcaaatcatt ctcgcagccg cgcgcagcaa ggtctggcac gcgctggtcg acgccgaggc
     1501 cttcggcgac tggtttggcg tggccctcaa ggggcagcgt ttcgtggtcg gtgaaaccgc
     1561 gcgcggccac atcacctacc ctggctacga gcacctgatg tgcgagatgc aggtcgtgca
     1621 gatcgagccc gagcgccggt tcgcgtaccg ctggcatccg tacgcggtcg atcccgccat
     1681 ggactatgcg cgggagccga ctacgctggt ggaattcacg ctggaggatc acgccgacgg
     1741 catcctgctg cgcgtcgtcg aatccggctt cgaccggatc ccgctggcac gtcgcgccga
     1801 ggcctatcgc atgaacagcg gcggctggga ccagcagatg cagaacatcc acgcgtacct
     1861 ggccgggcac tgagcgcgcc atgccgagga gccccgcgtg gcagaagagt gcgccggtgt
     1921 ttgccgccct cggcgatccg acccggctgc acctgctcgc cgcgctgtgt gcgggtggcg
     1981 ccctgtcgat cgcgcaactc accgccggca ccgcgatcag ccgccaggcc gtcaccaagc
     2041 acctgcaggt gctggctggc gccggcctgg tgcgtgacga ctggcaaggg cgcgagcgac
     2101 tgtgggagct ggagccgtcg cggctggccg aagcgcagcg cgcgctggac gccatcgcga
     2161 cgcaatggga ccaggcgctg ttgcgcctga agtgcgtcgt cgagcgctga gccgcacacc
     2221 gtcccaccgc gcccgccgca cacgcaccgc ccccccttcc gccgtcactg cgctgccgga
     2281 gatggccggc accagttgca cggcacaccc gactcgccga ccgccgccct catcgcattg
     2341 cctccgggag gccgtgcgcg ctacaaggta cgcgggccac tgcacgcggg tatccacatg
     2401 ggcaaggttc gcgtcgccgg tttctcgctg tccctcgacg gtttcggcgc aggcgtcgag
     2461 cagagcctgg acgatccgct gggcaagcgc ggcaaggagc tgcaccagtg gttctttgcc
     2521 acccgcacgt tccacgcgat ggtc
//
LOCUS       DASSVL010000401         2648 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1323324,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000401 DASSVL010000000
VERSION     DASSVL010000401.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2648)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2648)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2648
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1323324"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..557
                     /locus_tag="VFM52_06985"
     CDS             <1..557
                     /locus_tag="VFM52_06985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007512331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HET8764949.1"
                     /translation="LANEGWLILAAIVTVYIVLGVLYESYIHPLTILSTLPPAGVGAL
                     LALILCGMSLSVDGIVGIVLLIGIVKKNAIMMIDFAIEARRTGLNAHDAIRRACLLRF
                     RPIMMTTAAAMLGALPLALGTGIGSELRRPLGVSIVGGLLLSQLVTLYTTPVIYLYME
                     RFSDWLAARRERRALEHARADRTA"
     gene            718..>2648
                     /locus_tag="VFM52_06990"
     CDS             718..>2648
                     /locus_tag="VFM52_06990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019238037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HET8764950.1"
                     /translation="MNVSGSFIRRPIGTSLLAIGLFVGGMICYFLLGVSALPNMQFPA
                     IFVQASQAGADASTMASTVAAPLERHLGQVPGIETMRSSSSEGRTFVFMMFRNGTDLD
                     SAARDVQAAINSAAPDLPSGLNGAPSYQKANPNDDPVIAFALTSDTQAAGDLYNVADT
                     LLAQRLRQLPGVSSVEIAGASTPAIRVDVNLRALNAMGLSPDQLRNALRAANVTSPEG
                     FLSDGKTRMAVAATTSLHSAADFAKLVVASHDGTPVRLADVANVYAGTEDAYQAAWFG
                     GQPAVLMYVYKKADANVISTVDLVKAQLPALRTFLQPGTRLTPFFDGTPTIRASLHEV
                     QATLLISLAMVVLTMALFLRRLAPTLIAAVAVPLSLAGAFVAMYILDYTLNNLTLLAL
                     VIAIGFVVDDAIVVIENIIRHIDEGMDRKQATLAGAREIGFTIVSITASLVAVFIPLL
                     FAGGITGMFMHEFAVTLVAAIVVSAAVSLTLTPALCGRFLGGHRAREASAGAARSHVL
                     DRFHAAMLAAYRRALDFSLRHVLAFSLTPLVLIVATFYLFTVVKTGLFPQQDTGLIWG
                     RATSSATVSFDESRQRLERLTAMLLADPDVATVGTRLGSSRQGASGSFNIDLKTRSEG
                     RTDDTFTVLARLSAKAAKYP"
BASE COUNT          373 a          957 c          859 g          459 t
ORIGIN      
        1 cactcgcgaa cgaaggctgg ctcattctgg cggcaatcgt caccgtctac atcgtcctcg
       61 gagtactgta cgagagctac atccacccgc tgacgatcct ctccacgctg ccgccggccg
      121 gcgtcggcgc gctgctggcg ctgatcctgt gcggcatgag cctgtcggtg gacggcatcg
      181 tcggcatcgt gctcttgatc ggcatcgtga agaagaacgc gatcatgatg atcgacttcg
      241 cgatcgaggc gcgccgcacc ggcctcaacg cgcatgacgc gatccgccgc gcctgcctgc
      301 tgcgcttccg cccgatcatg atgaccaccg cggcggcgat gctcggcgcc ttgccgctgg
      361 cgctgggcac cggcatcggc tcggagctgc gccggccgct gggcgtgtcg atcgtcggcg
      421 gcctgctgct gtcgcagctg gtgacgctgt acaccacgcc cgtgatctac ctgtacatgg
      481 agcgtttctc cgactggctc gccgcacgcc gagaacggcg tgcgctggaa catgcgcggg
      541 ccgatcgcac ggcgtgatcc gatcgcttgc cgcctgcccc tgcccgcgcg acgccggcag
      601 gggtttttcc ttttcgcgtc ccgatcaacc gttttgccgc tggtgcgttg agggtgggat
      661 gatccgcctg gatcccgccc ggcatcgtgc cgcctgcacc acggtcgtgt ttcccgcatg
      721 aatgtctccg gctccttcat ccgccgtccg atcggcacca gcttgctcgc gatcggcctg
      781 ttcgtcggcg gcatgatctg ctacttcctg ctcggcgtgt cggcgctgcc gaacatgcag
      841 ttcccggcga tcttcgtgca ggccagccag gccggcgccg acgccagcac catggcctcc
      901 accgtggccg cgccgctgga acggcacctg ggccaggtgc ccggcatcga gacgatgcgc
      961 tcgtccagct ccgaagggcg caccttcgtc ttcatgatgt tccgcaacgg taccgacctc
     1021 gattcggcgg cgcgcgacgt gcaggcggcg atcaactcgg cggcgccgga cctgcccagc
     1081 ggcctcaacg gcgcgcccag ctaccagaag gccaatccca acgacgaccc ggtgatcgcc
     1141 ttcgcgctga cctccgacac gcaggccgcg ggcgatctct acaacgtcgc cgacactttg
     1201 ctggcgcagc gcctgcgcca gttgccgggt gtctcgtcgg tggagatcgc cggcgcttcg
     1261 accccggcga tccgcgtcga cgtgaacctg cgcgcgctca acgcgatggg cctgtcgccg
     1321 gaccagctgc gcaacgcctt gcgcgcggcc aacgtgacct cgccggaagg cttcctcagc
     1381 gacggcaaga cgcgcatggc ggtggccgcc accacctcgc tgcacagcgc cgcggacttc
     1441 gcgaaactgg tggtggccag ccacgatggc acgccggtgc gcctcgccga cgtggcgaac
     1501 gtctacgccg gtaccgagga cgcctaccag gcggcgtggt tcggcggcca gccggcggtg
     1561 ctgatgtacg tgtacaagaa ggccgacgcc aacgtcatct ccaccgtgga cctggtcaag
     1621 gcacaactgc cggcgctgcg cacgttcctg cagccaggca cccggctcac cccgttcttc
     1681 gacggcacgc caaccatccg cgcctcgctg catgaggtac aggcgacctt gctgatctcg
     1741 ctggcgatgg tggtgctgac catggcgctg ttcctgcgtc gtctcgcacc cacgctgatc
     1801 gccgcggtgg cggtgccgct gtcgctggcc ggtgcgttcg tggcgatgta catcctcgac
     1861 tacacgctca acaacctcac cctgctggcg ctggtgatcg cgatcgggtt cgtggtggac
     1921 gacgcgatcg tggtgatcga gaacatcatc cgccacatcg acgagggcat ggaccgcaag
     1981 caggccaccc tggccggcgc acgcgagatc ggcttcacca tcgtctcgat caccgcctcg
     2041 ctggtggcgg tgttcatccc gctgctgttc gccggcggca tcaccggcat gttcatgcac
     2101 gagttcgcgg tgaccctggt ggcggcgatc gtggtgtcgg ccgcggtgtc gctgacgctc
     2161 acgccggcgc tgtgcgggcg tttcctcggc ggccatcgcg cacgcgaggc cagcgccgga
     2221 gccgcgcgca gccacgtgct ggaccgcttc cacgccgcca tgctggccgc gtatcgccgg
     2281 gcgctggatt tctcgctgcg ccacgtgctg gccttctcgc tgacgcccct ggtgctgatc
     2341 gtcgccacgt tctacctgtt caccgtggtc aagaccggtc tgttcccgca gcaggacacc
     2401 ggcctgatct ggggccgcgc cacctccagc gccacggtat cgttcgacga gagccggcag
     2461 cggctggagc ggctcaccgc gatgctgctg gccgacccgg acgtggccac ggtaggcacg
     2521 cgcctgggca gcagccgcca gggtgccagc ggctcgttca acatcgacct caagacgcgc
     2581 agcgaagggc gcaccgacga caccttcacc gtgctggccc ggttgagcgc caaggccgcg
     2641 aagtatcc
//
LOCUS       DASSVL010000402         6551 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_475254, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000402 DASSVL010000000
VERSION     DASSVL010000402.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 6551)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6551)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6551
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_475254"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..309
                     /locus_tag="VFM52_06995"
     CDS             <1..309
                     /locus_tag="VFM52_06995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019465473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid A hydroxylase LpxO"
                     /protein_id="HET8764951.1"
                     /translation="KTDQPRVIFFADVERPLKFRWLQAVNRHVSAFMGRITNSPNMES
                     ATEKAGFVNRMYALSQRNRERNRAFKKKHPKLFRAGKYLAIAFVLWLIVLAPWPFFAR
                     "
     gene            complement(327..1472)
                     /locus_tag="VFM52_07000"
     CDS             complement(327..1472)
                     /locus_tag="VFM52_07000"
                     /EC_number="2.3.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013884.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase"
                     /protein_id="HET8764952.1"
                     /translation="MKAREWLSDLHGGRRGWAAGRIATVADGLAGGRDNFLLLRLLAA
                     SLVIYGHAPAITGGRGWPDVFVWLGWGSYSGDLAVDVFFVVSGFMIAGSYLRRRHLAD
                     FLWARLLRIYPAYIACLLGTAFVLGAACTSLPAHVYYGSHDVVRYVSKNIQLGKGLIW
                     ELPGVFTGNPRLSIVNGSIWTLPAEVRMYLWVALAGMLGILSRRWLCNLLLAWLVVLG
                     WLAPAHVPLVPLASFLRLAGCFALGVFCCVNRERIPVGWWCVAVLAVLAWVTHATLLY
                     PFVFALALTAFVFAFGYASPWLGCLRFGDYSYGLYLWGFPMQQWVAHLAPQLPPAGNA
                     LLALPPAMLLAVLSWHLVERPALRLKSLPSAVHAKARAKFAQLRAGG"
     gene            1759..3198
                     /locus_tag="VFM52_07005"
     CDS             1759..3198
                     /locus_tag="VFM52_07005"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008209788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HET8764953.1"
                     /translation="MTLRILKILLALVLLAVLAGAVWLGTAGRPLLLIATGSVSRGLC
                     DAAFVSQVDPESVFHEQHAPMLRGISWAFHWHIDRARREAHASVLGAFGARAVLRPGL
                     GCLLVHGDGPVPEAAGFTPTPIASPFPEQAVASSDPAIRAAIDRAFAEPDPAHPRNTK
                     AVVVLHDGRLIAERYAPGYGPDTPIWAHSLTKSLTNALIGILVREGRLRLDQPAPIAA
                     WRRPGDPHGAVTVDQLLRMDSGLPFDETDGVVNPLTRMVFLTHDMAAYAVGTPLAHPP
                     GTHWAYGNLDYMLLGRIVTDAAGGSAVEAERFVRRELFAPLGMAHTLIQADATGSLAG
                     FGGSYGTARDFARFGQLYLDDGVVDGQRILPAGWVAYSHSQTLDTGYGAGFWLNIRHD
                     TRVPVWNAPWGMPQLPRDMYYARGAFGQYVVIVPSEKLVVVRMGISLDYGDHTGDLVA
                     AIIRALHARSSPRATAPCGSRWACRPAGA"
     gene            complement(3113..4258)
                     /locus_tag="VFM52_07010"
     CDS             complement(3113..4258)
                     /locus_tag="VFM52_07010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008209790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HET8764954.1"
                     /translation="MNLSFWVYVYIAAAVQAALLALALWRRPANREANRLLAVWVALA
                     GIDLAVKAAYWHTLAPEWFRAYRFVALFPFLYGSLFFLYVRALTRGLGFRWRDARHLL
                     GFVAMLLVTSPVLLGGAARLQAMSASWIAGERSIGSWFDLALFVYSLSYVAAALVQVH
                     RYRRRLRERRSDADRLSLRWIDTMAACQVVIWCIAVVQALVYLPILNYGLLFGAIAGW
                     ICVVGWFSLGQPPVAIEPEAEPADDEAAAPAATSEPDDARHDAVQARLAVLMEGAAPL
                     YLEPALTIGQVAKRSGYPEYLVSTVINRRFGGTFWDYINRLRVEAARGCLADAGDTRS
                     ILDIAYACGFTSKSTFNAAFKRQLGDTPSGYRKAQSLAATSGHAGPG"
     gene            complement(4372..5385)
                     /locus_tag="VFM52_07015"
     CDS             complement(4372..5385)
                     /locus_tag="VFM52_07015"
                     /EC_number="1.1.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008209792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate dehydrogenase"
                     /protein_id="HET8764955.1"
                     /translation="MNKTIAVIPGDGIGPEIMAATLRVLDALDCGLTYDYVDAGMVAL
                     EKHGDLLPKATLDKIAEHQVALKGPLTTPIGGGFTSINVTLRRHFDLYANVRPAVSFP
                     GTKSRFENIDIITVRENTEGAYLAEGQTISEDGQTATSLVRNTRRGGSRIVRYAFELA
                     VKKGRKKVTAVHKANIIKTASGLFLNVAREIAKEYPQIEFNEMIVDNTCMQLVMKPEQ
                     FDVIVTTNLFGDILSDLCAGLVGGLGLAPGDNIGENVAIFEAVHGSAPDIAGKGIANP
                     CALLLAAADMLDHLGMVAKGDKLRAAIRDTMTNDRASVTPDLGGKGSTQSFGAAIAKR
                     VKG"
     gene            complement(5643..6041)
                     /locus_tag="VFM52_07020"
     CDS             complement(5643..6041)
                     /locus_tag="VFM52_07020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002806638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HET8764956.1"
                     /translation="MSGDAQDGKDRVAEFTAFRQRMNERILAEDNQVVRRFFALDTQT
                     YKPGALDAKTKELLSLVASLVLRCDDCISYHVAQCVECGVTREEFFEVFGVGLVVGGS
                     IVIPHLRRAVDFLDRLETGGGAAKPCADHA"
     gene            complement(6038..6301)
                     /gene="grxC"
                     /locus_tag="VFM52_07025"
     CDS             complement(6038..6301)
                     /gene="grxC"
                     /locus_tag="VFM52_07025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015448214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015036 - disulfide oxidoreductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin 3"
                     /protein_id="HET8764957.1"
                     /translation="MPKIEVYSTAVCPYCVAAKNLLKAKGLSWEDVFVDADPAQREVM
                     LKRSGGRRTVPQIFINDQHVGGYDDLVAAERSGKLAELLGSAA"
BASE COUNT         1099 a         2326 c         2169 g          957 t
ORIGIN      
        1 aagaccgacc agccgcgggt gatctttttc gccgacgtcg aacggccatt gaaattccgc
       61 tggctgcaag cggtcaatcg ccacgtgagc gctttcatgg ggcgcatcac caactcgccc
      121 aacatggaat ccgccactga aaaggccggc ttcgtgaacc gcatgtacgc cctgagccaa
      181 cgcaaccgcg aacgcaaccg cgcgttcaag aaaaagcacc ccaagctgtt ccgcgccggc
      241 aaatacctcg ccatcgcctt cgtgctgtgg ctgatcgtgc tcgcaccgtg gccgttcttc
      301 gcgcgttgaa gcctctctgg cgtctctcaa ccgcccgcac ggagctgcgc aaatttcgct
      361 cgtgccttcg cgtgcaccgc gcttggcaag gacttcaacc gcaacgctgg tcgctcgacc
      421 agatgccagg acaacaccgc cagcagcatg gccggcggca gcgccagcaa ggcgttgccc
      481 gccggaggta actgcggggc gagatgcgcg acccattgct gcattggaaa gccccacagg
      541 tagagcccgt acgaatagtc gccgaagcgc aggcacccca gccacggcga ggcgtagccg
      601 aacgcgaaca cgaaggcggt gagcgccagc gcaaagacga acggataaag cagcgtcgcg
      661 tgcgtgaccc aggccaacac cgccagcacg gccacgcacc accagcccac cggaatgcgc
      721 tcgcggttga cgcagcagaa aacgcccagc gcgaagcagc cggccagccg caggaacgac
      781 gccagcggca ccagcggcac gtgcgccggt gccagccatc ccagcaccac cagccacgcc
      841 agcagcaagt tgcacagcca gcggcgcgac aggatgccca gcatccccgc cagcgccacc
      901 cacaggtaca tacgcacctc ggccggcagc gtccagatcg aaccgttgac aatcgacagc
      961 cgcggattgc cggtgaacac gcctggcagt tcccagatca ggcccttgcc aagctggatg
     1021 ttcttcgaca cgtaacgcac cacgtcgtgg ctgccgtaat agacgtgcgc cggcaagctg
     1081 gtgcacgcag cgccgagcac gaaggccgtg cccagcaggc aggcgatata ggcgggatag
     1141 atgcgcagca gccgcgccca caggaagtcc gccaggtggc gtcggcgcag gtagctgccg
     1201 gcgatcatga agccgctgac cacgaagaac acgtccaccg ccaggtcgcc ggagtagctg
     1261 ccccagccca gccagacgaa gacatccggc cagccgcgac caccggtgat ggcgggcgca
     1321 tggccgtaga tcacgaggct cgccgccagc agccgcagca gcaggaagtt gtcgcggccg
     1381 ccggccaggc catcggccac ggtggcgatg cgacccgccg cccaaccgcg ccgaccgccg
     1441 tgcagatccg acagccactc ccttgctttc atgcactccc ctgtaccggc agccaacgcc
     1501 ggcggtatgc cggcaaagtg cgcatcttaa ccgcgcccct cccggcatga ccccgtgcgg
     1561 acacgtccga atccgccgga tcgcaccctg cctggcgtgc cggagcgtac ggttccgccg
     1621 ccccggacga ggccggacgc ccgccgccgc atgctggctc aacctcaccg catgcgagct
     1681 gctgcgctga cttggcacct gctcgcatcc ctccaccgtc gccctggcga cgcatccgtg
     1741 caacacggga agaacgccat gaccctacgc atcctgaaaa tcctcctcgc cctggtgctg
     1801 ctcgcggtgc tcgccggtgc agtctggctc ggcaccgcgg gccggcccct gctgctcatc
     1861 gccaccggct cggtcagccg cggcctgtgc gacgcggcct tcgtcagcca ggtcgatccc
     1921 gaaagcgtgt tccacgagca gcatgcgccg atgctgcgtg gcatcagctg ggcgttccac
     1981 tggcacatcg atcgcgcgcg gcgcgaggcg cacgccagcg tgctgggcgc cttcggcgcg
     2041 cgtgccgtgt tgcgacccgg gctgggttgc ctgctggtgc acggcgacgg cccagtgccc
     2101 gaggccgccg gtttcacgcc cacgcccatc gccagtccgt tcccggaaca ggcggtcgcc
     2161 tcaagcgatc ccgccatccg agccgcaatc gaccgtgcct tcgccgaacc cgatccggcg
     2221 cacccgcgca acaccaaggc cgtcgtggtg ctgcacgacg gccggctgat cgccgagcgt
     2281 tacgcgccgg gctacgggcc ggacacgccg atctgggcgc actcgctgac caagtcgctg
     2341 accaacgcgc tgatcggcat cctggtgcgc gaaggcaggc tgcggctgga ccagcccgcg
     2401 cccatcgccg cctggcgccg ccccggcgac ccgcatggtg ccgtgaccgt cgaccagctg
     2461 ctgcgcatgg acagcggcct gccgttcgac gagaccgacg gggtggtgaa tccgctgacg
     2521 cgcatggtct tcctcacgca cgacatggcc gcctatgcgg tgggcacgcc gctggcgcat
     2581 ccgcccggca cccactgggc ctacggcaac ctggactaca tgctgctcgg ccgcatcgtc
     2641 accgacgccg ccggcggcag cgcggtggaa gccgagcgct tcgtgcgacg cgagctgttc
     2701 gcaccgctgg gcatggcgca cacgctgatc caggccgacg ccaccggcag cctggccggc
     2761 ttcggcggca gctacggcac ggcgcgcgac ttcgcccgct tcggccagct ctacctcgac
     2821 gacggcgtgg tcgatggcca gcgcatcctg cccgcgggct gggtcgccta cagtcactcg
     2881 cagacgctgg acaccggcta cggcgcgggc ttctggctga acatccggca cgacacgcgg
     2941 gtgccggtgt ggaacgcgcc ctggggcatg ccgcagctgc ccagggacat gtactacgcg
     3001 cgcggtgcgt tcgggcagta cgtggtgatc gtgccgtcgg aaaagctcgt ggtggtgcgc
     3061 atgggcatct cgctggatta cggcgaccac accggcgacc tggtggcagc gatcatccgg
     3121 gccctgcatg cccgctcgtc gccgcgagcg actgcgcctt gcggtagccg ctgggcgtgt
     3181 cgcccagctg gcgcttgaag gcggcgttga aggtggactt ggaagtgaag ccgcaggcgt
     3241 aggcgatgtc gaggatgctg cgcgtgtcgc cggcatcggc caggcagccg cgcgccgcct
     3301 ccacgcgcag ccggttgatg tagtcccaga acgtgccgcc gaagcggcgg ttgatcaccg
     3361 tcgacaccag gtactcggga tagccgctgc gcttcgccac ctggccgatg gtgagcgccg
     3421 gctccaggta cagcggcgcg gcgccttcca tcaacaccgc gagccgcgcc tgcaccgcgt
     3481 cgtggcgcgc gtcgtccggc tcgctggtcg cggcgggcgc ggcggcttcg tcgtctgccg
     3541 gctcggcttc gggctcgatc gccaccggcg gctggcccag gctgaaccag ccgaccacgc
     3601 agatccagcc ggcgatggcg ccgaacagca ggccgtaatt gaggatcggc aggtagacca
     3661 gggcctgcac gacggcgata caccagatca ccacctggca ggccgccatc gtgtcgatcc
     3721 agcgcagcga caggcggtcg gcgtcggagc gccgctcgcg caggcgccgg cgatagcggt
     3781 gcacctgcac caaggccgcc gccacgtagg acaggctgta gacgaacaac gcgaggtcga
     3841 accaggaacc gatcgagcgc tcgcccgcga tccagctcgc cgacatcgcc tgcagccgcg
     3901 ccgcgccccc cagcagcacg ggcgaggtga ccagcagcat cgcgacaaaa ccgagcaggt
     3961 gccgcgcatc gcgccagcgg aagcccagtc cccgggtcag cgcccgcacg tagaggaaga
     4021 acaggctgcc gtagaggaac gggaacagcg ccacgaagcg gtaggcgcgg aaccattccg
     4081 gcgccagcgt gtgccagtac gccgccttca ccgccaggtc gatgccggcc agcgccaccc
     4141 acacggcgag cagccggttc gcctcgcggt tggccggccg ccgccacagc gccagcgcga
     4201 gcagcgcggc ctgcacggcg gcggcgatgt agacgtagac ccagaacgag aggttcatcg
     4261 gatggtcgcg cagaaggccg aagcgcccat gctagcaatc gccgtcgtgc gctccaaaaa
     4321 cgacaaggcc gcggacgatg ccgcggcctt gcgtgtcgat gtcgcggacg ctcagccctt
     4381 gacgcgcttc gcgatggccg cgccgaagct ctgggtcgag cccttgccgc cgaggtccgg
     4441 cgtcacgctg gcgcggtcgt tggtcatggt gtcgcggatg gcggcgcgca gcttgtcgcc
     4501 cttggcgacc atgccgaggt ggtcgagcat gtcggcggcg gccaacagca gcgcgcacgg
     4561 attggcgatg cccttgccgg cgatgtccgg cgccgagccg tgcacggcct cgaagatcgc
     4621 gacgttctcg ccgatgttgt cgcccggcgc caggccaagg ccgccgacga ggccggcgca
     4681 caggtcggaa aggatgtcgc cgaacaggtt ggtggtgacg atcacgtcga actgctcggg
     4741 cttcatcacc agctgcatgc aggtgttgtc cacgatcatc tcgttgaact cgatctgcgg
     4801 gtattccttg gcgatctcgc gcgccacgtt gaggaacagg cccgaggcgg tcttgatgat
     4861 gttggccttg tgcacggccg tgaccttctt gcggcccttc ttcaccgcca gttcgaacgc
     4921 gtagcgcacg atgcggctgc cgccgcggcg ggtgttgcgc accagcgagg tcgcggtctg
     4981 gccatcctcg gaaatcgtct ggccctcggc gagatacgcg ccctcggtgt tctcgcgcac
     5041 ggtgatgatg tcgatgttct cgaagcgcga cttggtgccc gggaacgaca ccgccgggcg
     5101 cacgttcgcg tagagatcga agtggcggcg caaggtgacg ttgatcgagg tgaagccgcc
     5161 gccgatcggc gtggtcagcg ggcctttcag cgccacctgg tgctcggcga tcttgtccag
     5221 cgtggccttg ggcagcaggt cgccgtgctt ttccagcgcg accatgccgg catcgacgta
     5281 gtcgtaggtg aggccgcaat cgagcgcgtc gagcacgcgc agcgtggcag ccatgatctc
     5341 cgggccaatg ccgtcgccgg ggatcaccgc aatggtcttg ttcatggggg ggactccttg
     5401 gggaacgcag ccgccacgcc aagggtcggc gtggcatgcg tgctgcggaa agtccgccgt
     5461 tatcgccgat tgcgcccacg cctggccgcc accacggcac gcaaggcgtt gaaaatcctc
     5521 gcacgcagca ttgcgtaacc tcgcacaccc aacgcttgtc gggagtctgc ttgcgggcaa
     5581 cgccatggcc ttcgacaggc gcccgggcaa aacaccgccc gcgggcgggt cctacgcgcg
     5641 atttatgcgt ggtcggcgca gggtttggcg gcgccaccgc cggtttcgag ccggtcgagg
     5701 aaatccacgg cgcggcgcag gtgcgggatc acgatcgaac cgccgacgac caggcccacg
     5761 ccgaacacct cgaagaactc ctcgcgcgtc acgccgcact ccacgcactg ggcgacgtgg
     5821 tagctgatgc agtcgtcgca gcgcagcacc agcgaggcga ccaggctgag cagttccttg
     5881 gtcttcgcgt ccagcgcgcc gggcttgtag gtctgcgtgt cgagcgcgaa gaagcggcgc
     5941 acgacctggt tgtcctccgc caggatgcgc tcgttcatgc gctggcggaa cgcagtgaac
     6001 tcggcgacgc gatccttgcc atcctgcgcg tcaccgctca tgccgcgctc ccgagcagct
     6061 cggcaagctt gccgctgcgc tcggcggcga ccaggtcgtc atagccgccc acgtgctggt
     6121 cgttgatgaa gatctgcggc accgtgcggc ggccgccgct gcgcttcagc atcacctcgc
     6181 gctgcgccgg gtcggcgtcg acgaacacgt cctcccagct caggcccttg gctttcaaca
     6241 ggtttttcgc cgccacgcaa tacgggcaaa cggcggtgga atagacttcg atcttcggca
     6301 tggaacgact ccacaggtac tggcccggag atggcggcgc cggtacggaa atgcaagcca
     6361 cgatggtggt gaacatcgcc ggccactcag ggtcagagtg atattgtcgc ctgagcatgc
     6421 gcatgtcatc cggacatctc acgccccgcc tcctcgccgc cgtgctcgcg gccagcctcg
     6481 cgtttgccgc cggtgcgcag gacaacgtgc gcctgcccga cctgggcagc tcggccaacg
     6541 cgctgatctc g
//
LOCUS       DASSVL010000403         5816 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1323377,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000403 DASSVL010000000
VERSION     DASSVL010000403.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 5816)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5816)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5816
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1323377"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1296
                     /locus_tag="VFM52_07030"
     CDS             <1..1296
                     /locus_tag="VFM52_07030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007513458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HET8764958.1"
                     /translation="ELIPASVLRFKGLQNVYRRDGFGSNYVAVAPPLAPDDVQPWREP
                     RYAAMTGVLVFPGATLDAVLATRAVQLLVRDPYRDASVAIDGQDVPLGANFTAPYGLW
                     LARSDFATQSIRSLFGRTGGLDKPRVLLMQPYDPDRLTVVMLHGLASSPEAWVNVANE
                     VLGDDVLRRHYQVWQVYYPTNVPIAVNLAQIHAALQATLRHFDPAGTAPASRHVTLVG
                     HSMGGVIARLLVSASGDKLWSLVPHERDLSPARRARLHKALAPYLQFSPMPQVDAAVF
                     MAAPHRGTPMARHRLARWLAELIRMPLGVLKEVASISDLLGDGGNAPLHVSNSIGNLS
                     DEDPFIVATENLPIAPDVRYHSIIGLYKPHGSLEQSSDGVVPYTSAHLAGAASEVVIP
                     SWHSVQETPAAILELRRILRAHLQRVDGGDAAGKAAGPG"
     gene            complement(1375..1980)
                     /locus_tag="VFM52_07035"
     CDS             complement(1375..1980)
                     /locus_tag="VFM52_07035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008208567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HET8764959.1"
                     /translation="MKIRTPRITVLAAGIMAVTLVGCSQYVKKDELNAAVQQLQQKQQ
                     DQQQQLDGLKQQMQSQFSKYDSQITAMQGRVSVDTVAHFAFNSADLNDQDKPALQNFA
                     QTISKYHPNVMITVEGFADPAGSRAYNRKLGMRRAKAVRDFLVSSGINASQIRAVSYG
                     SATNRQVVKGASHDRGADNRRVSLTVDSTGAGAVASTTSAG"
     gene            complement(2219..3994)
                     /locus_tag="VFM52_07040"
     CDS             complement(2219..3994)
                     /locus_tag="VFM52_07040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008433855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase C-terminal
                     domain-containing protein"
                     /protein_id="HET8764960.1"
                     /translation="MTLYHAPTDDQRFALFDLLDAEATLTKLDGGGEHTRDLLDAVLE
                     EAGKLAEQVLAPTNESGDAEGCHYDKATHTVTTPKGFKQAFKAFTEGGWAGLTAKEQF
                     GGQALPGVIGIATTELFQSGNLGWSLYPLLSEGACHALELHGTPAQQDTYMKPIVAGR
                     WTGTMCLTEPQAGSDLGLLKTRAEPNADGSYAITGTKIFISAGEHDMAENIVHLVLAR
                     LPDAPAGSRGISMFIVPKFKVNADGSLGERNAAFAGAIEHKMGIHGSATCVMNFDGAT
                     GFLIGKPHKGLAAMFTMMNAARLSVGVQGLALSERAWQNSLNYARERLQGRSLSGAKL
                     PEKPADNLLVQPDVRRMLLTQRAFVEGSRALLYYTALQTDVEARGSDAATRQAASELV
                     AFLIPIAKGFVTEVAQECTKEALQIYGGHGFIAENGMEQFVRDARIITLYEGTTGIQA
                     ADLLGRKILQLQGVGFKRFAGEIGAFCKAHAADAKLAAFIVPLGAAVKQWGELTLALA
                     GRVQANPEELGAAAVDYLWYSGYVTLAYFWARSVAAAEAGEHNADFKQAKRDTATFYF
                     TRILPRTLAHKAAIEAGAATIADIA"
     gene            complement(4022..4504)
                     /locus_tag="VFM52_07045"
     CDS             complement(4022..4504)
                     /locus_tag="VFM52_07045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008208540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8764961.1"
                     /translation="MPRLLRYLVPTVLALVLAACGQPRKSVFPPTLSVQQLAVQPNGT
                     WRLTLRIQNNSYGGMDFTTLDGQLQIAELVPLRLHTAFERDIPAFASDVVPLDVVPTP
                     EMAKALAAIASKGSAGSLAYRIDGTTLAKPEQEKKPRDFHFSGHDWLSPVPGIANTYR
                     "
     gene            4636..5109
                     /locus_tag="VFM52_07050"
     CDS             4636..5109
                     /locus_tag="VFM52_07050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007804142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SET domain-containing protein-lysine
                     N-methyltransferase"
                     /protein_id="HET8764962.1"
                     /translation="MSRRFVARRSPIHGTGVFACAPIRKGEEIIQYRGVLMTHAEADA
                     MYGDGGESGHTFLFTLNERYIIDANRRGNTARWINHSCAPNCRAVVVESASGDPRRDK
                     VMIEALRAIEAGEELTYDYGITLDVPHTARLKRLWRCLCGAPNCTGTMLKPRHRS"
     gene            5156..>5816
                     /locus_tag="VFM52_07055"
     CDS             5156..>5816
                     /locus_tag="VFM52_07055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8764963.1"
                     /translation="MSSLPPDPADAPRSGTRAQVLLNSPLAAAPRMLGYQAWRRPQPP
                     MLWRRVIGWTGSLLAQLIFLFAFVLGPAYEPPPAQEVPAAKMQLRFVEVPDVTPPKGE
                     VPRKVGPVHRGSSAPARRVASTTITRRSASTPVMPAKQVAAPTPAPSLPQAATDLHPV
                     QAAVQTPPVTLPTPSMQPPVPPKFRPKPLRAPQLEGNQPIPPPPSLALPEVPTPAAPT
                     MA"
BASE COUNT          832 a         1929 c         2073 g          982 t
ORIGIN      
        1 gagctgattc ccgcctccgt gctgcgtttc aaggggctgc agaacgtgta ccgccgcgac
       61 ggcttcggct ccaactacgt ggcggtcgcg ccgccactgg cgccggatga cgtgcaaccg
      121 tggcgtgagc cacgctacgc ggcaatgacc ggcgtgctgg tgtttcccgg cgcgacgctc
      181 gacgcggtgc tggcgacgcg cgcggtgcag ctcctggtgc gcgacccgta tcgcgacgca
      241 agcgtggcga tcgacggcca ggatgtgccg ctcggcgcga atttcaccgc accctacggc
      301 ctgtggctcg cgcgatcgga tttcgccacg cagtcgatcc gctcgttgtt cgggcgcacg
      361 ggtggcctcg acaagccacg cgtgctcttg atgcagccgt acgacccgga tcgcctcacg
      421 gtggtgatgc tgcacggcct ggcgagcagc cccgaggcct gggtcaacgt ggccaacgag
      481 gtgctcggcg acgacgtgct gcgccggcat taccaagtgt ggcaggtgta ttacccgacg
      541 aatgtgccga tcgcggtgaa cctggcgcag atccatgccg cgctgcaggc gacgctgcgt
      601 cacttcgatc cggccggcac ggcgccggcg agccgccacg tcacgctggt cgggcacagc
      661 atgggcggcg tcatcgcgcg gctcctggtt tccgccagcg gcgacaagct gtggagcctg
      721 gtgccgcacg agcgcgatct gtcgccggcg cgccgcgcgc ggctgcacaa ggcgctggcg
      781 ccgtacctgc agttctcgcc gatgccgcag gtggacgccg cggtgttcat ggccgcgccg
      841 catcgcggca cgccgatggc gcggcatcgc ctggcgcgct ggctggcgga actgatccgg
      901 atgccgctcg gcgtgctcaa ggaggtcgcc agcatttccg atctgctcgg cgacggcggc
      961 aacgcgccgc tgcatgtttc caacagcatc ggcaacctgt ccgacgagga cccgttcatc
     1021 gttgccaccg agaacctgcc gatcgcgccg gacgtgcgct accactcgat catcggcctg
     1081 tacaagccgc acggttcgct cgaacaaagc agtgacggcg tggtgccgta caccagcgca
     1141 cacctggccg gtgcggcgtc cgaggtggtg attccgtcct ggcacagcgt gcaggagacg
     1201 ccggcggcga ttctcgaatt gcgccgcatc ctgcgcgcgc atctgcagcg ggtggatggt
     1261 ggcgacgcgg cgggcaaggc cgcggggccg gggtgattcg gggctttcgc gaccgttgaa
     1321 agcgaaaacg cccggagtcg atccgggcgt ttccgtgtgg gcatgtggaa ccgatcagcc
     1381 ggcggacgtc gtcgacgcca ccgcgccggc gccggtggaa tccaccgtca gcgagacgcg
     1441 gcggttgtcg gcgccgcggt cgtggctggc acccttcacc acctggcggt tggtggccga
     1501 gccgtagctc accgcgcgga tctggctggc gttgatgccg ctggaaacca ggaaatcacg
     1561 caccgccttg gcgcgccgca tgccgagttt ccggttgtac gcgcgcgagc cggccgggtc
     1621 ggcaaagcct tccacggtga tcatcacgtt cgggtggtac ttgctgatgg tctgggcgaa
     1681 gttctgcagc gcgggcttgt cctggtcgtt gaggtcggcg ctgttgaagg cgaagtgcgc
     1741 cacggtgtcg acgctgacgc ggccctgcat ggcggtgatc tgcgagtcgt acttggagaa
     1801 ctgcgactgc atctgctgct tgaggccgtc gagctgctgt tgctggtcct gctgcttttg
     1861 ctgcagctgc tggacggcgg cgttgagctc gtcctttttc acgtattgcg agcagcccac
     1921 cagggtgacg gccatgatgc cggcagccag cacggtgatt cgcggggttc gaattttcat
     1981 taatggcatc tcctgtgcgt gccggcatcg cggtgacagc ggcgatgccg gtcgttcatg
     2041 gattcccttt ttgaacctac cccacgctgg cgcgtgtcgc gcgcatcggg gatgccgcca
     2101 ctacgtttgc gttcagtttt ttcgcgccga tggcgggtga ggcgacggac gcgcagggca
     2161 cgaaaaagcg aagcccggcg ggtgccgggc ttcgcttcga cgccggggtg gccgatgctc
     2221 aggcgatgtc ggcgatcgtc gcggcgccgg cttcgatcgc agccttgtgc gcgagcgtgc
     2281 gcggcaggat gcgggtgaag tagaacgtcg cggtgtcgcg cttggcctgc ttgaagtcgg
     2341 cgttgtgttc gcctgcttcg gcggcggcga cgctgcgcgc ccagaagtac gcgagcgtga
     2401 cgtagccgga gtaccacagg taatcgacgg cggcggcgcc cagttcctcc gggttggcct
     2461 gcacccggcc ggcgagcgcg agcgtgagtt cgccccactg cttcaccgcg gcgccgagcg
     2521 ggacgatgaa ggccgcgagc ttggcgtcgg cggcgtgcgc cttgcagaac gcgccgatct
     2581 cgccggcgaa gcgcttgaag cccacgccct gcaattgaag aatcttgcgg ccgagcaggt
     2641 ccgcggcctg gatgccggtg gtgccctcgt acagggtgat gatgcgggcg tcacgcacga
     2701 actgctccat gccgttctcg gcgatgaagc cgtggccgcc gtagatctgc agcgcctcct
     2761 tggtgcactc ctgcgcgacc tcggtgacga agcccttggc gatcgggatc aggaacgcca
     2821 ccagttcgct cgcggcctgg cgcgtggccg cgtcgctgcc gcgcgcctcg acgtcggtct
     2881 gcagcgcggt gtagtagagc agcgcgcgcg aaccctcgac gaacgcgcgc tgggtgagca
     2941 gcatgcggcg cacgtccggt tgcaccagca ggttgtcggc gggtttttcc ggcagcttgg
     3001 cgccggagag cgagcggccc tgcaggcgct cgcgcgcgta gttgaggctg ttctgccacg
     3061 cgcgctcgga aagcgccagg ccctgcacgc cgaccgacag gcgcgccgca ttcatcatgg
     3121 tgaacatcgc ggcgaggccc ttgtgcggct tgccgatcag gaagccagtg gcgccgtcga
     3181 aattcatcac gcaggtggcc gagccgtgga tgcccatctt gtgttcgatc gcgccggcga
     3241 acgcggcgtt gcgctcgccg agcgaaccat cggcgttcac cttgaacttc ggcacgatga
     3301 acatcgagat gccgcggctg ccggccggcg cgtcaggcag gcgcgccagc accaggtgca
     3361 cgatgttctc ggccatgtcg tgctcgccgg cgctgatgaa gatcttggtg ccggtgatcg
     3421 cgtagctgcc gtcggcattc ggctcggcgc gggtcttgag caggccgagg tcggagccgg
     3481 cctgcggctc ggtcaggcac atcgtgccgg tccagcggcc ggcgacgatc ggcttcatgt
     3541 aggtgtcctg ctgcgccggc gtgccgtgca gttcgagcgc gtggcaggcg ccttcggaga
     3601 gcagcgggta caggctccag ccgaggttgc cggactggaa cagctcggtg gtggcgatgc
     3661 cgatcacgcc tggcagcgcc tggccgccga actgctcctt ggcggtcagc ccggcccagc
     3721 cgccctcggt gaacgccttg aaggcctgct tgaagccctt gggcgtggtc accgtgtgcg
     3781 tggccttgtc gtagtggcag ccttcggcat cgccggattc gttggtcggt gcgagcacct
     3841 gctcggcgag cttgccggct tcttccaata ccgcatcgag caggtcgcgc gtgtgctcgc
     3901 cgccgccgtc cagcttggtg agcgtggcct cggcatcgag caggtcgaac agggcgaagc
     3961 gctggtcatc ggtgggcgcg tgataaaggg tcatgggctt gtctcctgaa cggccgtggg
     4021 gtcagcggta ggtgttggcg atgcccggta cgggcgacag ccagtcgtgg ccactgaagt
     4081 ggaaatcgcg gggtttcttt tcctgctcgg gcttcgccag cgtggtgccg tcgatgcggt
     4141 aggcgagcga gccggcgctg cccttgctgg cgatcgccgc cagcgccttc gccatctccg
     4201 gcgtcggcac tacgtcgagc ggcacgacgt cgctggcgaa ggcggggatg tcgcgctcga
     4261 acgcggtgtg cagccgcagc ggcaccagct cggcgatctg cagctggccg tcgagcgtgg
     4321 tgaagtccat gccgccgtag ctgttgttct ggatgcgcag cgtgaggcgc caggtgccgt
     4381 tcggctgcac cgcgagctgc tgcacgctca gcgtcggcgg gaacacgctc ttgcgcggct
     4441 ggccgcaggc ggcaagcacg agcgcaagga cagtgggcac gaggtagcga agcaggcggg
     4501 gcatggactc acctcaaacg attgtttgaa tattggccgc gggcaggtgg cacgtcaatg
     4561 ccgcagcgtt ccactggcag cgtgcagcgg gcatcatggc gcgattcccg gtcttcgatc
     4621 cctgatcccg cccccatgtc acgtcgcttc gtcgcccgtc gctctcccat ccacggcacc
     4681 ggcgtgtttg cctgcgcccc gatccgcaag ggcgaggaga tcatccagta ccggggcgtg
     4741 ctgatgaccc acgccgaagc cgacgcgatg tacggcgatg gcggcgagag cgggcacacg
     4801 ttcctgttca cgctcaacga gcgctacatc atcgacgcga accgccgcgg caacactgcg
     4861 cgctggatca accacagttg cgcgccgaat tgccgcgccg tggtcgtcga gagcgccagc
     4921 ggcgacccgc ggcgcgacaa ggtgatgatc gaggcgctgc gcgcgatcga ggcgggcgag
     4981 gagctgacct acgactacgg catcaccctc gacgtgccgc acaccgcgcg cctgaaacgc
     5041 ctctggcgct gcctgtgcgg cgcgccgaac tgcaccggca cgatgctaaa acccaggcac
     5101 cggtcctgac gccggtttcg gcaatcgttg ggcctggcat cgctacactc gcggcatgtc
     5161 gtcgctaccc ccggatcccg ccgacgcgcc ccgttcgggg acgcgtgcgc aagtgctgct
     5221 gaactcgcca ctggcggcag cgccgcgcat gctcggctac caggcgtggc ggcggccgca
     5281 gccgccgatg ctgtggcggc gcgtgatcgg ctggaccggc agcctgctgg cgcaactgat
     5341 tttcctgttt gcgttcgtgc tcggtccggc ctacgagccg ccaccggcgc aggaggtgcc
     5401 ggccgcgaag atgcagctgc gtttcgtcga ggtgccggat gtcacgccgc cgaagggcga
     5461 ggtgccgcgc aaggtcggtc cggtgcatcg cggcagcagc gcgccggccc ggcgcgttgc
     5521 cagcacgacg atcacgcgcc ggtcggcaag tacaccggtg atgccggcga aacaggtcgc
     5581 cgcgccgact ccggccccca gcctgccgca ggcggccacc gacctgcatc cagtgcaggc
     5641 cgccgtgcag acgccgccgg tcacgctgcc gacgcccagc atgcagccgc cagtgccgcc
     5701 gaaattccgg cccaagccgc tgcgcgcgcc gcagctcgag ggcaaccagc caatcccgcc
     5761 accgccctcg ctggccctgc cggaggtgcc gaccccggcg gcgccgacca tggcca
//
LOCUS       DASSVL010000404         2503 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_348430, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000404 DASSVL010000000
VERSION     DASSVL010000404.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2503)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2503)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2503
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_348430"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            134..814
                     /locus_tag="VFM52_07060"
     CDS             134..814
                     /locus_tag="VFM52_07060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008433642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4194 domain-containing protein"
                     /protein_id="HET8764964.1"
                     /translation="MNWPKGEAAPETPAPERVGDPALFPCDTGSLPFEARRVLCQLLA
                     GPSVDAERHALLWPVLLREEVAIRARLCELFLELVLDRELRVAFVRQADTGELETPTL
                     LRASPLTFIDSVLLLTLRQRLAEADAQGQRAAVEVDELHAQLAVYEPPQGTDRAGFTK
                     KLNAAIEKMKRNSVLQPIHDSEGRFEVSPALKLLFSAEDVQALGAVYRGHLAGQRGGL
                     DLQSEEDE"
     gene            814..>2503
                     /locus_tag="VFM52_07065"
     CDS             814..>2503
                     /locus_tag="VFM52_07065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008433645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HET8764965.1"
                     /translation="MTKSDATPALLLSDLPSPRDEQFRMRRLQVLNWGTFSGLHEVPI
                     AERGFLFVGRSGSGKTTLLDAMSALLVPPALVDFNAAAREAERSGRDRSLVSYVRGAW
                     AAQHDEDSGEVATQYLRRGPVWSALALEYRNALGRSVSLVRLLWIRGNGSAADDVKKH
                     FIVAERPFDLATELEGFDLDLRRLKQRLTDVHHHDSFNAYAERFRRLLGIGNDTALRL
                     LHKTQSAKNLGDLNHFLRDFMLERPETFAVADRLVAEFAELDEAHKAVVTAREQIETL
                     RPAHAAHDRWMDVRRERSDLDELLAGMDGYRERQRLRLLDARLAELDTLDRGLEGEEG
                     RRQQTLDQHQRDLGELQTRHREQGGDRIEQLEHEHAGVSRERDACLRHRGVADAACRQ
                     LDWQLAGTPQGFAEQLTAAHNLLDAGQDAAASADQRMLELGLQKQQAAMSFATARAEI
                     AALERHPSNIPEFMQALRSRLCAAVGLAETALPFAGELIQVRADEAAWSGAIERLLHG
                     FALSLLVDERHYAKVAAWVDATHLGGKLVYHRIGAADVRNVSAPLPRSLLHKLEL"
BASE COUNT          423 a          860 c          834 g          386 t
ORIGIN      
        1 ggctacgttg ccctgggctg ccgccatggc ctgccggtgg ccgatcgttt cgagtcggtg
       61 ggctggcgcg gcgaagacgg ccacgcacgc cgagcccgca ttccactgct gtattttctc
      121 aaggaaaagc gcgatgaact ggcctaaggg cgaagcagct ccggaaaccc ccgccccgga
      181 gcgcgtgggc gatcccgcac tgtttccctg cgacacgggc agcctgccgt tcgaggcgcg
      241 gcgcgtgctg tgccagttgc tggccggccc cagcgtggat gccgaacgcc atgcgctgct
      301 gtggccggtg ctgctgcgtg aggaagtggc gatccgtgca cgcctgtgcg aactgttcct
      361 ggagctggtg ctcgatcgcg agctacgcgt cgccttcgtg cgccaggccg ataccggtga
      421 gctggaaacg ccgaccctgc tgcgcgcaag cccgctcacc ttcatcgact cggtgctgct
      481 gttgaccttg cgccagcgct tggccgaagc cgacgcgcag ggccagcgcg cagcggtgga
      541 agtggatgaa ctgcatgctc agcttgccgt gtacgagccg ccgcaaggca ccgaccgcgc
      601 cggcttcacc aaaaagctca acgcggccat cgaaaaaatg aaaaggaaca gtgtgctgca
      661 gccgatccac gacagcgagg gtcgcttcga ggtttcgccc gcgctgaaac tgctgttctc
      721 cgccgaggac gtgcaggcgc tgggcgcggt ttaccgcggg caccttgctg gtcagcgcgg
      781 cggactcgat ctgcagagcg aagaagacga gtgatgacaa agtccgacgc cacgcccgcc
      841 ctgctgcttt ccgacctgcc ctcgccgcgc gacgaacagt tccggatgcg ccgcctgcag
      901 gtgctcaact ggggcacctt ctccggcctg catgaagtgc cgatcgccga acgcggtttc
      961 ctgttcgtgg gccgctccgg ctcgggcaag accacgctgc tggatgcgat gtcggcgctg
     1021 ctggtgccgc ccgcgctggt ggatttcaac gccgccgcgc gcgaagccga gcgcagcggt
     1081 cgcgaccgtt cgctggtgtc ctacgtgcgc ggtgcctggg ccgcccagca tgacgaagac
     1141 tcgggcgaag tcgccaccca gtacctgcgc cgtggcccgg tgtggtcggc actggcgctg
     1201 gaataccgca acgcgctggg ccgctcggtg agcctggtac ggctgctgtg gattcgcggc
     1261 aacggatccg ccgcagacga cgtgaagaag cacttcatcg tcgccgagcg accgttcgac
     1321 ttggccaccg agttggaagg tttcgacctc gacctgcgcc gcctcaagca acgcctgacc
     1381 gatgtccacc accacgacag cttcaacgcc tatgccgaac gtttccgccg cctactcggc
     1441 atcggcaacg acaccgcatt gcggctgctg cacaaaaccc agtcggcgaa gaacctgggc
     1501 gatctcaacc atttcctgcg cgacttcatg ctggaacgcc cggaaacctt cgccgtggcc
     1561 gaccgcctgg tggccgaatt tgccgaactg gacgaggcac acaaggcggt ggtcactgcg
     1621 cgcgagcaga tcgagacgct gcgtccggcc cacgcggccc acgaccggtg gatggacgtg
     1681 cgtcgggagc gtagcgatct ggatgaactg ctggccggca tggacggcta ccgcgagcgc
     1741 caacggctgc gcctgctcga cgcgcggctg gccgagctgg acacgctcga ccgcggcctc
     1801 gaaggcgagg aaggccgccg ccagcagacg ctggaccagc accagcgcga cctcggcgag
     1861 ctgcagacgc gccatcgcga acaaggcggc gaccgcatcg aacagctcga gcacgagcac
     1921 gccggcgtgt cgcgcgagcg cgatgcctgc ctgcgccatc gcggcgtggc cgacgccgcc
     1981 tgccgccaat tggactggca acttgccggc acgccacagg gattcgcgga acaactcacc
     2041 gccgcgcaca acctgctcga tgccggccag gatgccgccg ctagtgccga ccagcgcatg
     2101 ctggaactgg gcttgcagaa gcagcaggcc gcaatgagct tcgccacggc gcgcgccgag
     2161 atcgccgcgc tggaacggca tccatccaac attcccgagt tcatgcaagc cttgcgcagt
     2221 cgcctgtgcg ccgcggtggg cctggccgaa accgcgctgc catttgccgg tgagctgatc
     2281 caggtgcgcg cggacgaggc ggcgtggagc ggcgcgatcg agcgcctgct gcacggcttc
     2341 gcgctgtcgc tgctggtgga cgaacggcat tacgcgaaag tcgccgcctg ggtcgatgcc
     2401 acccacctcg gcggcaagct ggtgtatcac cgcatcggcg ccgccgacgt cagaaacgta
     2461 tccgcaccgc tgccgcgctc gctgctgcac aaactggaac tgg
//
LOCUS       DASSVL010000405         5523 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_687268, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000405 DASSVL010000000
VERSION     DASSVL010000405.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 5523)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5523)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5523
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_687268"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            727..2973
                     /locus_tag="VFM52_07070"
     CDS             727..2973
                     /locus_tag="VFM52_07070"
                     /inference="COORDINATES: protein motif:HMM:NF020846.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protease pro-enzyme activation domain-containing
                     protein"
                     /protein_id="HET8764966.1"
                     /translation="MQHARLKALVAAIALTVSGSIGATTAIPAAANAFTVIHHATHLR
                     TGDRVTSLLAAAHPMRVAVSLKLRNKAQLDAFVADPHHPHLTPAQFAARYAPTQAQAQ
                     AVAAFLQRSGFHGVTIAPNRQLVVASGRADTVTRAFQTTLSQVVTRNGRLAYANTSDV
                     KIPAALQGMVQEVLGLQTVHTFHLLPHRLASSGSATAHNPADFAAIYNAGSTATGATV
                     PVGIIAEGSMTNVKSDFASFLAQNPGLGSIPLNVVTVDGGSTDTSGDGEWDLDSQDIA
                     GISGGVKSLTLYTTSSLNTQPLLDDFNKAVTDNTVRIINVSIGGCETGSETNGAATGD
                     NIFEQADAQGQTFSVSSGDSGADECGTGGITPSWPADSQYVVAVGGTELFTSGTTWVN
                     ETVWNELASNQGATGGSPSTFEPQPSWQKNVGQNAGSVYRGVPDVAFDADPNSGASVI
                     VDGANQQIGGTSLASPLFVGVWARALATNPSLGFAAPLIYQDAASHYATDFHDVTSGN
                     NSGETAAVGWDYTTGFGSINIANFVANVAGSGGTPPTGSTPVANFSDSASGLTVNFSN
                     SSTDTGGTLTGYAWTFGDGGTSTAASPSHTYAVAGTYTVNLTVTDNNGKTSSKSASVT
                     VQATTPPPTGTFSNNNPVAIGDNQTITSSIPVTGEPGNAPASLSVHVNITHNWSGDLE
                     IDLVAPNGQYAVLQSPDYNNDGNIDTTYTVDASSVAGNGTWKLRVIDNDPWYTGDQGE
                     LNGWSLTF"
     gene            3163..3522
                     /gene="folB"
                     /locus_tag="VFM52_07075"
     CDS             3163..3522
                     /gene="folB"
                     /locus_tag="VFM52_07075"
                     /EC_number="4.1.2.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007081659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004150 - dihydroneopterin aldolase
                     activity [Evidence IEA];
                     GO_process: GO:0006760 - folic acid-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroneopterin aldolase"
                     /protein_id="HET8764967.1"
                     /translation="MDTVFIEHLQVEAEIGVYAWERGQRRELWIDLEMAVDNTVPAAS
                     DDVARTVDYAAVAQRLTDYAASTQFQLVETLAERCAALIREEFGVPWLRLKLSKPGAV
                     ATARAVGVCIERGERPS"
     gene            3552..3956
                     /locus_tag="VFM52_07080"
     CDS             3552..3956
                     /locus_tag="VFM52_07080"
                     /inference="COORDINATES: protein motif:HMM:NF013456.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003848 -
                     2-amino-4-hydroxy-6-hydroxymethyldihydropteridine
                     diphosphokinase activity [Evidence IEA];
                     GO_process: GO:0009396 - folic acid-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-amino-4-hydroxy-6-
                     hydroxymethyldihydropteridine diphosphokinase"
                     /protein_id="HET8764968.1"
                     /translation="MSRWLLLLGSSLPTDAGVQRALVRLRALGSVRALTPVRRCPSYD
                     GTPDRWYFNALAELDSALDHAALHARLRAIEAALGRRRDVPGEVAIDLDILARQVDGS
                     WQADAHALAKGDLDHPITQTLLQLAGIAGIQR"
     gene            complement(3966..4712)
                     /locus_tag="VFM52_07085"
     CDS             complement(3966..4712)
                     /locus_tag="VFM52_07085"
                     /EC_number="1.5.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015446524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pteridine reductase"
                     /protein_id="HET8764969.1"
                     /translation="MSPRHDRPVALITGAGKRVGAVIARTLHAAGYDLVLHCRHSVAE
                     ASELAAQLAQVRTDSTLVLQAELAEPATPAELVAATLARYGRLDALVNNASAYYATPL
                     ATTTPAQWDELLGTNARVPFFLSQAAADALRAARGAIVNIADIYAERPLRGYPVYSVS
                     KAALVMLTKVLAVELGPEVRVNAVAPGNMLWSTNAVKAETADTVRERTALGRQGSPQD
                     VADAVLYLVRDAHYTSGTVLATDGGRLLHI"
     gene            complement(4753..5430)
                     /locus_tag="VFM52_07090"
     CDS             complement(4753..5430)
                     /locus_tag="VFM52_07090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007508879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8764970.1"
                     /translation="MHPRNPALPATDPDRDNQLPALPGTHAETDRVTRAILDFVAAIP
                     PSGERAGAVPHERSRQLASAAARRAALTAGTLALPPGPLGWLTVLPELVTIWKIQAQL
                     VSDIAAAHGRHLELGREQMLYCLFRHTAAQALRDFAVRMGDRVLFQRMSQTLVEQVAR
                     QLGLRFSRRMLGAGAARWLPVVGAAGVGAYAYYDTTQVAKTALALFAGDIETASQPPQ
                     RGVTPAE"
BASE COUNT          899 a         1875 c         1921 g          828 t
ORIGIN      
        1 gggtgcggcg gccagcgcgt gcagcgcggg ttgctcgtgc ggcgccggca gttcggctgc
       61 cgcggtcggc aggcttgcgg ccagcaagcc gccaaacagg atcggggtca gtccgcgcat
      121 ggtcactcgc cttggggtgt cgcgtcacca taacgtgttt tcctgcgaat gcgcagcact
      181 gacagcgctg gacgcacgcc cggttattgc cggtaccgag gcaatgcgcg cacttcattg
      241 cgggcgtggc acgacgacat ggaaatgcat ggcgtgcggg acatggtatc gataatcagg
      301 ccatgcaggc cggactccga ccacgtcgaa aatgggcagg cattcggtgg tgcgcgcaat
      361 tatttgcggt gcaatgacgc ggcgcaacga ttcgtgaagc cgatataaat gacggacatg
      421 cgtgtcatcg ctatttgcga aacaggatat tgacggaggt taattccatt gcgtaatttc
      481 gcgtggttcg cacatgggga gcatggcgaa tgattccgga tggcaccgtt gggagcggtg
      541 ttgcggagca gtaagcctca agccgcctgc gggccggatg cccgatggaa aggtggccgt
      601 gatgggcgcg ccggaatcgt ctgacgaaca gcaaacgggg tcgcacgcag tgcgacgaat
      661 cattgccacg gggctgaatg gccgcgtcgt cggttttcgc cccaaataat cttcggggag
      721 attttcatgc aacatgctcg tttgaaagcc ctggttgccg cgattgcgct gaccgtatcc
      781 ggttcaattg gtgcgacgac ggccatcccg gctgcagcga atgcgttcac cgtcattcac
      841 cacgccaccc atctgcgcac tggcgaccgc gttaccagcc tgctggccgc ggcgcatccg
      901 atgcgggtgg cggtgtcgct gaaactgcgc aacaaggcgc agctcgatgc ctttgtcgcc
      961 gatccgcacc atccgcatct cacgccggcg caatttgccg cgcgctatgc gccgacccag
     1021 gcccaggccc aggcggtcgc cgcattcctg cagcggtccg gtttccatgg cgtcaccatc
     1081 gccccgaacc ggcaactggt ggtcgccagc ggccgcgccg acaccgtgac gcgcgcgttc
     1141 cagaccacgt tgtcgcaggt ggtgacccgc aacgggcgtc tcgcctacgc gaacaccagc
     1201 gacgtcaaga ttcccgcggc gctgcagggc atggtgcagg aggtgctggg cctgcagacg
     1261 gtgcacacgt tccacttgtt gccgcaccgc ttggccagca gcggttccgc caccgcgcac
     1321 aacccggccg atttcgcggc gatctacaac gccggcagca cggccaccgg cgccaccgtg
     1381 ccggtcggca tcattgccga aggcagcatg accaacgtca agagcgactt tgcctcgttt
     1441 ctcgcgcaga atccgggcct cggcagcatc ccgctgaacg tggtgaccgt ggatggcggc
     1501 agtaccgaca ccagcggcga cggcgaatgg gacctggaca gccaggacat cgccggcatc
     1561 tccggcgggg tgaaatcgct caccctgtac accacctcca gcctgaacac gcagccgttg
     1621 ctggatgact tcaacaaggc ggtgaccgac aacacggtgc gcatcatcaa cgtgtcgatc
     1681 ggcggctgcg agaccggctc ggaaaccaac ggcgcggcga ccggcgacaa catcttcgag
     1741 caggccgacg cgcaggggca gaccttctcg gtgtcctccg gcgacagcgg tgcggacgaa
     1801 tgcggcaccg gcggcatcac gccgagctgg ccggcggact cgcaatacgt cgtcgcggtc
     1861 ggtggcaccg aactgttcac cagtggcacc acgtgggtga acgagaccgt gtggaacgag
     1921 ctggccagca accagggggc gaccggcggc agcccgagca cgttcgaacc gcagccgagc
     1981 tggcagaaga acgtcggcca gaatgccggc agcgtgtatc gcggcgtgcc cgacgtggcg
     2041 ttcgacgccg acccgaactc gggcgccagc gtgatcgtgg acggtgccaa ccagcagatc
     2101 ggcggcacca gcctcgcctc gccgctgttc gtcggcgtgt gggcgcgcgc actggcgacg
     2161 aatccatcgc tcggttttgc ggcgccgctg atctaccaag atgcggcgag ccattacgcc
     2221 accgacttcc acgacgtgac cagcggcaac aacagcggcg agaccgcggc ggtgggctgg
     2281 gattacacca ccggcttcgg ctcgatcaac atcgcgaact tcgtcgcgaa cgtcgccggc
     2341 agtggcggca cgccgccgac cggcagcacc ccggtggcga atttcagcga cagcgcgagt
     2401 ggcctcaccg tcaacttcag caacagctcc accgacaccg gcggcaccct caccggctac
     2461 gcgtggacgt tcggcgacgg cggcacctcg accgcggcga gcccgagcca cacctacgcg
     2521 gtggccggca cctatacggt caacctcacg gtcaccgaca acaatggcaa gaccagcagc
     2581 aagagcgcgt cggtgacggt gcaggcgact acgccgccgc cgaccggcac tttcagcaac
     2641 aacaacccgg tggccatcgg cgacaaccag accatcacca gcagcatccc ggtgaccgga
     2701 gagccgggca acgcaccggc cagcctctcg gtgcacgtca acatcaccca caactggtcg
     2761 ggcgacctgg agatcgacct ggtcgcgccg aatggccagt acgcggtgct gcagtcgccc
     2821 gactacaaca acgacggcaa catcgacacc acgtacacgg tggatgcctc gtcggtggcg
     2881 ggcaacggca cctggaagct gcgcgtgatc gacaacgacc cgtggtacac cggcgatcag
     2941 ggcgagctca atggctggag cctgacgttc tgaacgcgct gatgcgggtg gctgccgcac
     3001 ggtgagccac gttccgcggc ccggagggcg acttccgggc cgcggttgtc ctccgccatc
     3061 gcgcgcgatg gcgttcgcgg tgccgaggca aggggaggcc ggcggcttgc acaagcgccc
     3121 gtgctcgccc acgctgtggg gccgataccc gtgcgagccg ccatggacac cgtcttcatc
     3181 gaacacctgc aggtcgaggc cgagatcggc gtctacgcct gggagcgcgg ccagcgccgc
     3241 gagttgtgga tcgacctgga gatggcggtc gacaacacgg tgccggcggc gagcgacgac
     3301 gtggcgcgca ccgtggatta cgcggcggtc gcgcagcgcc tgacggacta cgcggccagc
     3361 acgcagttcc agctggtgga gaccctggcc gagcgctgcg cggcgctgat ccgcgaggag
     3421 ttcggcgtac cgtggctgcg cctgaagctc tccaagcctg gcgcggtggc cacggcgcgc
     3481 gccgtcggcg tgtgcatcga gcgcggcgag cggccgagct gatggcgccg ccctccactg
     3541 cgggcgccac tatgtcccgc tggctgctgc tgctgggttc cagtctgccg accgacgccg
     3601 gcgtgcagcg cgcgctggtg cggctgcgcg cgctgggctc ggtgcgcgcg ctgacgccgg
     3661 tgcgccggtg cccatcctat gacggcacgc ccgaccgctg gtatttcaac gcgctggccg
     3721 agctggattc ggcgctcgac cacgctgcct tgcatgcgcg gctgcgcgcg atcgaagcgg
     3781 cgctcgggcg ccgccgcgac gtgcccggcg aggtggcgat cgacctcgac atcctcgccc
     3841 gccaggtcga cggcagttgg caggccgatg cgcacgcgct ggcgaaaggc gacctggacc
     3901 acccgatcac gcagaccctg ctgcagctgg ccggcatcgc cggcatccag cgctgagcgc
     3961 agtgctcaga tgtgcagcag gcgtccgccg tcggtcgcca gcaccgtgcc gctggtgtag
     4021 tgcgcgtcgc gcacgaggta gagcacggcg tcggccacgt cctgcggcga gccctggcga
     4081 ccgagcgcgg tgcgctcgcg cacggtgtcg gcggtttccg ccttcaccgc gttggtcgac
     4141 cacagcatgt tgccgggcgc gaccgcgttg acgcgcacct cggggccgag ttccaccgcc
     4201 agcaccttgg tcagcatcac cagcgccgcc ttgctgacgc tgtacaccgg atagccgcgc
     4261 agcgggcgct cggcgtagat gtccgcgatg ttgacgatcg cgccgcgcgc cgcacgcagg
     4321 gcgtccgccg cggcctggct caggaagaac ggcacgcgcg cattggtgcc gaggagttcg
     4381 tcccactgcg ccggcgtggt cgtcgccagc ggcgtggcgt agtaggccga ggcgttgttg
     4441 accagcgcgt cgaggcggcc gtagcgcgcc agcgtcgcgg cgacgagctc cgccggcgtc
     4501 gccggttcgg ccagctcggc ctgcagcacc agcgtgctgt cggtgcggac ctgcgcgagt
     4561 tgcgccgcca gctcgctcgc ttcggccacc gagtgccggc agtgcagcac caggtcgtag
     4621 cccgccgcgt gcagggtgcg cgcgatcacc gcgccgacgc gcttgccggc gccggtgatc
     4681 agcgcgacgg ggcgatcgtg gcgtggtgac atggggtctt ctctggcgat accggcggca
     4741 cagcttgccg gatcactccg cgggcgtcac gccgcgctgc ggcggctgcg atgccgtttc
     4801 aatgtcgccg gcgaacagcg ccagcgcggt tttcgccacc tgcgtggtgt cgtagtacgc
     4861 atacgcgccg acgcccgcgg cgccaaccac cggcaaccag cgcgcggcgc cggcacccag
     4921 catgcgccgg ctgaaacgca ggccgagctg gcgcgcgacc tgctcgacca gggtctgcga
     4981 catgcgctgg aacagcacgc ggtcgcccat gcgcacggca aagtcgcgca aggcctgcgc
     5041 cgcggtgtgg cggaacaggc agtacagcat ctgctcacgg cccagctcca gatggcggcc
     5101 gtgggcggcg gcgatgtcgc tgacgagctg cgcctggatc ttccagatcg tcaccagttc
     5161 cggcagcacg gtgagccaac ccagcggccc cggcggcagc gccagtgtgc cggcggtgag
     5221 cgcggcgcgg cgggccgcgg cgctggcgag ttgccgtgag cgctcatgcg gcacggcgcc
     5281 tgcgcgttcg ccgctgggcg gaatcgcggc gacgaagtcg aggatcgcgc gcgtcacgcg
     5341 gtcggtttcc gcgtgcgtgc ccggcagtgc gggcagctgg ttatcccggt ccggatcggt
     5401 ggccggcagg gcggggttgc gtggatgcat ggaccgagta tgcccgtttg tccccgcggc
     5461 ggcggtggcc ggcatccgcg ccgggaacgc ggttttgacc atgtccacaa tatgtaacaa
     5521 tat
//
LOCUS       DASSVL010000406         3223 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_433387, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000406 DASSVL010000000
VERSION     DASSVL010000406.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3223)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3223)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3223
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_433387"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..581
                     /gene="serC"
                     /locus_tag="VFM52_07095"
     CDS             <1..581
                     /gene="serC"
                     /locus_tag="VFM52_07095"
                     /EC_number="2.6.1.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0004648 -
                     O-phospho-L-serine:2-oxoglutarate aminotransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006564 - L-serine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="3-phosphoserine/phosphohydroxythreonine
                     transaminase"
                     /protein_id="HET8764971.1"
                     /translation="VADMSSDIFSQPLDVRRFGLIYAGAQKNIGPSGLVLMIVRRDLL
                     DRPVRPLAHILHYADHAAANSMLNTPNTWGWYLAGLTFQWMKAQGGLAAIAERNRAKA
                     QRLYAAIDGSGGYYRNDVEVAARSRMNVRFGVHDAALDPVFVAEAEAAGLIALKGHKA
                     LGGLRASLYNAVPLAAVEALVAFMHDFTARHG"
     gene            639..1727
                     /gene="pheA"
                     /locus_tag="VFM52_07100"
     CDS             639..1727
                     /gene="pheA"
                     /locus_tag="VFM52_07100"
                     /EC_number="4.2.1.51"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008213875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004664 - prephenate dehydratase activity
                     [Evidence IEA];
                     GO_process: GO:0009094 - L-phenylalanine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydratase"
                     /protein_id="HET8764972.1"
                     /translation="MTASKTSLADVRTRIDSIDRQIQELISERANWAREVAKVKGEGL
                     SAIDYYRPEREAHVLRMVVDRNQGPLSDTEMVRLFREIMSSCLAQEDPLKIGYLGPEG
                     TFSEQAVRKHFGHAAYGLPLGSIEEVFQEVANGHADFGVVPVENSGQGMIQMTLDMFL
                     TSKATICGEIELRVHQCLLSQGGRLEDVRRVYAHAQSLQQCKTWLRVNLPNVECFAVA
                     SNAEAARIACHDDTAAAIAGESAGKVYRIKTVADGIEDRADNTTRFLVIGRNLFPPSG
                     NDRTSLLITVNDKPGALYDVLSPFARHGVSMNRIESRPAHTGKWQYAFFIDISGHVQD
                     DAVQASIKEIEGSVAQLRVLGSYPVALP"
     gene            1724..3037
                     /gene="aroA"
                     /locus_tag="VFM52_07105"
     CDS             1724..3037
                     /gene="aroA"
                     /locus_tag="VFM52_07105"
                     /EC_number="2.5.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007508573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003866 - 3-phosphoshikimate
                     1-carboxyvinyltransferase activity [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-phosphoshikimate 1-carboxyvinyltransferase"
                     /protein_id="HET8764973.1"
                     /translation="MSERLDWSSRAAGPLRGEVRVPGDKSVSHRALMFAALAEGDSRI
                     HGFLEGGDTRATAAVLRQLGVRIDVSASGERLVHGVGLHGLRGSREVLDCGNAGTGMR
                     LLAGLLAGQAFDSTLVGDASLSKRPMRRVTDPLASMGARIDTRDGLPPLAIHGGQRLH
                     GIRYALPVASAQVKSALLLAGMYAEGETEITEPHPTRDYTERMLHAFGWPITFEPGRA
                     RLAGGHVLHATDVEVPADFSSAAFFLVAASIVPGSELRLPAVGLNPRRTGLLDALRLM
                     GADIRVEHARASGGEPVGDLVVRHAPLHGVELPEALVPDMIDEFPALFIAAAVAQGRT
                     VVRGAAELRVKESDRIASMAAGLRSLGTRIEETPDGAIIDGGVLAGGGAVETHLDHRI
                     AMSFAVAGLVAHDPVRINGCAHVATSFPGFLELANGCGFALAAAA"
     gene            3104..>3223
                     /locus_tag="VFM52_07110"
     CDS             3104..>3223
                     /locus_tag="VFM52_07110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008213873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-manno-octulosonate cytidylyltransferase"
                     /protein_id="HET8764974.1"
                     /translation="MSDPAFVVAIPARYGSTRLPAKPLREIAGVPMVVRVAQRA"
BASE COUNT          471 a         1101 c         1142 g          509 t
ORIGIN      
        1 tggtggccga catgtcgtcc gacatctttt cgcagccgct cgacgtgcgc cgcttcgggt
       61 tgatctacgc cggcgcgcag aagaacatcg gcccgtccgg gctggtgctg atgatcgtgc
      121 gccgcgacct gctcgatcgc ccggtgcggc cgctggcgca catcctgcac tacgccgacc
      181 atgcggccgc caattcgatg ctcaacacgc cgaacacctg gggctggtac ctggccgggc
      241 tgaccttcca gtggatgaag gcgcagggcg ggctggcggc gatcgccgaa cgcaaccggg
      301 cgaaggcgca gcgcttgtac gcggcgatcg acggttccgg tggctactac cgcaacgacg
      361 tcgaggtggc cgcgcgctcg cgcatgaacg tgcgcttcgg cgtgcacgac gccgcgctcg
      421 atccggtgtt cgtcgccgag gccgaggccg ccgggttgat cgcgctcaag gggcacaagg
      481 cactcggcgg attgcgcgcc tcgctctaca acgcggtgcc gctggcggcg gtggaagcgc
      541 tcgtcgcctt catgcacgac ttcaccgcgc gacacggctg agcttttccg gcatcatcga
      601 ccacggcatt tggccttcca tccgtccatc tccccgacat gaccgcaagc aagacttcgc
      661 tcgccgacgt gcgcacgcgc atcgacagca tcgaccgcca gatccaggag ctgatctccg
      721 agcgcgcgaa ctgggcgcgc gaggtggcga aggtgaaggg cgaagggctg tcggcgatcg
      781 attactaccg ccccgagcgc gaggcgcacg tgttgcgcat ggtggtggac cgcaaccagg
      841 ggccgctgtc ggacaccgag atggtgcggc tgttccgcga gatcatgtcc tcctgcctcg
      901 cgcaggagga cccgctgaag atcggctacc tcggcccgga ggggacgttc agcgagcagg
      961 cggtgcgcaa gcatttcggc cacgccgcct acggcctgcc gctgggcagc atcgaggaag
     1021 tgttccagga ggttgcgaac ggacacgccg atttcggcgt ggtgccggtg gagaattccg
     1081 ggcagggcat gatccagatg acgctggaca tgttcctcac ctccaaggcc acgatctgcg
     1141 gggaaatcga gttgcgcgtg caccagtgcc tgctgtcgca gggcggcagg ctggaggacg
     1201 tgcgtcgcgt ctacgcgcac gcgcagtcgc tgcagcagtg caagacctgg ctgcgggtga
     1261 acctgccgaa cgtcgagtgc tttgccgtcg ccagcaatgc cgaggccgcg cgcatcgcct
     1321 gccacgacga caccgcggcg gcgatcgccg gcgaatcggc cggcaaggtg taccgcatca
     1381 agaccgtggc cgatggcatc gaggaccggg ccgacaacac cacgcggttc ctcgtcatcg
     1441 ggcgcaacct gtttccgcct tccggcaacg atcgcacctc gctgctgatc accgtcaacg
     1501 acaagccggg cgcgctgtac gacgtgctca gcccgttcgc gcggcatggc gtcagcatga
     1561 accgcatcga gtcgcgcccg gcgcacaccg gcaagtggca gtacgcgttc ttcatcgata
     1621 tttccggcca cgtgcaggac gacgcggtgc aggcatcgat caaggagatc gaaggttcgg
     1681 tggcgcagtt gcgcgtgctc ggctcctacc cggtggcgtt gccgtgagcg agcggctgga
     1741 ttggtcgagt cgcgccgccg gcccgctgcg tggcgaggtg cgggtgccgg gcgacaagtc
     1801 ggtgtcgcac cgcgcgctga tgttcgcggc gctggccgag ggggattcgc gcatccacgg
     1861 ctttctcgaa ggcggcgata cgcgggcgac ggctgcggta ctgcgccagc tcggcgtacg
     1921 catcgacgtg tcggcatccg gcgagcgcct ggtgcatggc gttggcctgc acggcctgcg
     1981 cggcagccgc gaagtgctgg actgcggcaa tgccggcacc ggcatgcgcc tgctggcggg
     2041 gctgctcgcc ggccaggcgt tcgacagcac gctggtgggc gacgcctcgc tgtcgaagcg
     2101 gccgatgcgc cgcgtcaccg atccattggc cagcatgggc gcgcgcatcg acacccgcga
     2161 cggcctgccg ccgctcgcca tccacggcgg ccagcgcctg cacggcatcc gctatgcgtt
     2221 gccggtggcc agcgcccagg tcaagtcggc gctgctgctg gccggcatgt atgccgaggg
     2281 cgaaaccgag atcaccgagc cgcaccccac gcgcgactac accgagcgca tgctgcacgc
     2341 gtttggctgg ccgatcacct tcgagccagg gcgcgcgcgg cttgccggcg ggcacgtgct
     2401 gcatgcgacc gacgtcgagg tgccggcgga cttttcctcc gccgcgttct tcctcgttgc
     2461 cgcgagcatc gtgccgggtt ccgagctgcg cctgccggcg gtcggcctca acccgcggcg
     2521 caccggcctg ctcgacgcgc tgcgcctgat gggcgccgac atccgcgtcg agcacgcacg
     2581 ggcgagtggc ggcgagccgg tgggcgacct cgtcgtgcgc cacgcgccgc tgcacggcgt
     2641 cgagctgccg gaggcgctgg tgccggacat gatcgacgag ttcccggcct tgttcattgc
     2701 cgccgcggtg gcgcaagggc gcaccgtggt gcgcggcgca gccgagttgc gggtgaagga
     2761 atccgaccgc atcgcgagca tggccgctgg cctgcgcagc cttggcacgc gcatcgagga
     2821 aacgccggat ggcgcgatca tcgacggcgg cgtgctcgca ggtggcggcg cggtcgagac
     2881 ccatctggac catcgcatcg cgatgagttt cgcggtggcc ggcctggtcg cgcacgatcc
     2941 ggtgcgcatc aacggctgcg cccacgtggc cacgtccttt cccggtttcc tcgaactggc
     3001 gaacggctgc ggtttcgcgc tcgccgcggc tgcgtaggcg cggcctgcgc tgcacaacga
     3061 gcgcatcgca cgctacgctt ggaggcctcg cagcgaggtg tccatgtccg atccagcttt
     3121 cgtcgtcgcc atccccgcgc gctacggttc gacccggctg ccggcgaaac cgctgcgcga
     3181 aatcgccggg gtgccgatgg tggtccgcgt cgcgcagcgc gcg
//
LOCUS       DASSVL010000407         2752 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_687281, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000407 DASSVL010000000
VERSION     DASSVL010000407.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2752)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2752)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2752
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_687281"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..286)
                     /locus_tag="VFM52_07115"
     CDS             complement(<1..286)
                     /locus_tag="VFM52_07115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015448270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1109 domain-containing protein"
                     /protein_id="HET8764975.1"
                     /translation="MENPDVTADPQSHQALFDRLGTDLVPVRRLLPPGLRTAGWLLLV
                     AALAVGLLMHYGAGPMLRRWAATPDLAWAGIGAVVTAISAAWAAFALGVPG"
     gene            complement(273..860)
                     /locus_tag="VFM52_07120"
     CDS             complement(273..860)
                     /locus_tag="VFM52_07120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007507881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HET8764976.1"
                     /translation="MPAESAAASASESPDRRRSAWMAAAQAGDRRAYEKLLADSVALI
                     RAVARRQGVAPDHLDDVVQETLITVHRVRQTYDPSRSYDAWLGAIAARRAIDSLRSRG
                     RRDSRELHDEFALDRHTDADDASAATESEQRAQRLHEAIAELPPGQREAVEQLGLRER
                     SLSEAAELTGRNTGALKVNLHRALKALRERFHGEP"
     gene            1067..>2752
                     /locus_tag="VFM52_07125"
     CDS             1067..>2752
                     /locus_tag="VFM52_07125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015448272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015036 - disulfide oxidoreductase
                     activity [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis protein DipZ"
                     /protein_id="HET8764977.1"
                     /translation="MLVLILAYLGGVLTILSPCILPVLPFVFARSDRPFMRNGFPMLL
                     GMAITFAVVATLAALGGGWAVHANQYGRWVAMAVLAFLGLTLLSTHLAEWITRPFVAL
                     GNRLSQRSAADGDSVWGAAGLGVATGLLWAPCAGPILGLLLTGAALNGASVQTTLLLL
                     TYAAGAATSLGLALLIGGRVFVLMKRSLGAGEWVRRALGVLVLCGVAAIALGLDTGLL
                     TRVSLASTGGIEQKLINAVRPAPAPRPAPKPGEPLPVEGSFPSLAGATQWLNSPPLTT
                     EALRGKVVLVDFWTYSCINCIRALPYVRGWADKYKDHGLVVIGVHAPEFAFEKDPANV
                     VKAVKDLGVDYPVALDNDYAIWQGFDNQYWPAHYFIDARGQIRHHHFGEGEYRQSEDV
                     IRQLLAEAGQKNLPGGYVSDDHRGVEAAASNDPTRSPETYVGYARAMNFVGGRVARDD
                     PRDYRAPASLAVNQWSLDGRWTVHGENAQLAQAGGRIVYRFRGRDLHLVLGPAADGKP
                     IRYRVSIDGQPPGADHGMDTDPAGNGTVTGQRLYQLVRQARGSGERLFEIEFLD"
BASE COUNT          383 a          995 c          963 g          411 t
ORIGIN      
        1 gccccggcac gcccagcgcg aatgccgccc aggccgcgct gatcgcggtg accaccgcac
       61 cgatacccgc ccacgccagg tccggcgtgg cggcccagcg ccgcagcatc ggacctgcgc
      121 cgtagtgcat cagcaagccg accgccagcg ccgccaccag cagcagccag ccggccgtgc
      181 gcagccctgg cggcagcagc cgccgcaccg gcaccaggtc ggtgccaagg cggtcgaaca
      241 acgcctggtg ggattgcgga tcggccgtca cgtcagggtt ctccatggaa acgttcgcgc
      301 agtgccttca gcgcgcgatg caggttcact ttcagcgcgc cggtattgcg cccggtcagc
      361 tcggccgcct cgctgagcga gcgctcgcgc aggccaagct gttccaccgc ctcgcgctgg
      421 ccgggcggca actcggcgat cgcctcgtgc aggcgctgtg cgcgctgctc gctttcggtg
      481 gcggcgctgg cgtcgtcggc atccgtgtga cggtcgagcg cgaattcatc gtgcagttcg
      541 cggctgtcgc ggcgaccgcg gctgcgcagg gagtcgatcg cgcggcgagc ggcgatcgcg
      601 ccgagccagg cgtcgtagga acggctgggg tcgtaggtct ggcgcacgcg atgcacggtg
      661 atcagggttt cctgcaccac gtcatccaga tgatcgggcg ccacaccctg gcggcgtgcc
      721 acggcgcgga tcagcgccac cgaatcggcc agcagttttt cgtaggcacg ccggtcgccg
      781 gcctgcgcgg cggccatcca cgccgaccgg cgccggtcgg gcgattcgct ggcgctggcg
      841 gcggcggatt cggctggcac ggtccggacg ggactgatcc catgggaaag tccactatct
      901 agacccatga aggcggtggc ggtcaaggct tgcgacccgt tcgctccacg acggaacgct
      961 caccggggtc ttcgccgcat cgtgcgccga cgttacctcc tgcccgcagg taacccgggc
     1021 ggcggcggcg gcgaatcctc aggcaaccac ccacggatga aactccatgc tcgtgttgat
     1081 cctcgcctat ctcggcggcg tcctgaccat cctcagcccg tgcatcctgc cggtgctgcc
     1141 gttcgtgttc gcccgctccg accggccgtt catgcgcaac ggtttcccga tgctgctggg
     1201 catggcgatc accttcgccg tggtcgccac gctggccgcg ctcggcggcg gctgggcggt
     1261 gcacgcgaac cagtacggcc gctgggtggc gatggcggtg ctggccttcc tcgggctgac
     1321 cttgctgtcg acccatctgg ccgagtggat cacgcgcccg ttcgtggcgc tgggcaaccg
     1381 gctgtcgcag cgctcggccg cggacggcga ctcggtctgg ggcgcagccg gcctcggcgt
     1441 cgccaccggc ctgctgtggg cgccgtgcgc ggggccgatc ctcggcctgc tgctgaccgg
     1501 cgcggcgctg aacggcgcca gcgtgcagac caccctgctg ctgctcacct acgccgccgg
     1561 cgcggccacc tcgctgggcc tcgccctgct gatcggcggc agggtgttcg tgctgatgaa
     1621 gcgttcgcta ggcgccggcg aatgggtgcg gcgtgcgctc ggcgtgctgg tgctgtgtgg
     1681 cgtggctgcg atcgcgctgg gcctggatac gggcctgctc acccgcgtct cgctggccag
     1741 caccggcggc atcgagcaga agctgatcaa cgccgtgcgc ccggcgccgg cgccgcgccc
     1801 cgcgccgaag cccggcgagc cgctgccggt ggaaggcagc ttcccgtcgc tggccggtgc
     1861 cacccagtgg ctgaacagcc cgccgctgac caccgaagcg ctgcgcggca aggtggtgct
     1921 ggtcgatttc tggacctact cctgcatcaa ctgcatccgc gcgctgccgt acgtgcgcgg
     1981 ctgggccgac aagtacaagg accatggcct ggtggtgatc ggcgtgcatg cgccggagtt
     2041 cgccttcgag aaggacccgg ccaacgtggt caaggcggtg aaggatctcg gcgtcgacta
     2101 cccggtcgcg ttggacaacg actacgcgat ctggcaaggc ttcgacaacc aatactggcc
     2161 ggcgcactac ttcatcgacg cgcggggaca gatccgccac caccacttcg gcgaaggcga
     2221 ataccggcaa agcgaagacg tgatccgcca gctgctggcc gaggccggcc agaagaacct
     2281 gcccggcggc tatgtcagcg acgaccaccg cggcgtcgag gcggccgcgt cgaacgaccc
     2341 cacccgttcg ccggaaacct acgtcggcta cgcccgcgcg atgaacttcg tcggcggccg
     2401 ggtggcgcgc gacgacccgc gtgattaccg cgcacccgcc tcgctcgccg tgaaccagtg
     2461 gtcgctcgac ggccgctgga ccgtgcacgg cgaaaacgcg cagttggcgc aggccggcgg
     2521 ccgcatcgtc taccgcttcc gcggccgcga cctgcacctg gtgctcggcc cagctgcgga
     2581 cggcaagccg atccgctacc gggtcagcat cgatggccag ccgcccggcg ccgaccacgg
     2641 catggacacc gacccggccg gcaacggcac ggtcaccggc cagcgcctgt accagctggt
     2701 gcgccaggcc cgcggcagcg gcgagcgcct gttcgagatc gagttcctgg at
//
LOCUS       DASSVL010000408         7411 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_79619, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000408 DASSVL010000000
VERSION     DASSVL010000408.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 7411)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7411)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7411
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_79619"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..921
                     /locus_tag="VFM52_07130"
     CDS             <1..921
                     /locus_tag="VFM52_07130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010371361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0051119 - sugar transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar porter family MFS transporter"
                     /protein_id="HET8764978.1"
                     /translation="AAGSSTEALWLGQDAWRWMFWMQVLPSSLFLVSLLFIPESPRFL
                     VVRKREQEAAGVLERLYGESEARAKLAEIRASLAQDRHRPKLSDLIDKSRRRIRPIVW
                     VGVGLATFQQLVGINVVFYYGAVLWQAVGFSESDALLINVLSGALSIGACLIAVMLID
                     RIGRKPLLWIGSVGMTITLAVVAWAFLQADAGAAGKLSLPPAMGVTALVAANAYVVFF
                     NMSWGPVMWVMLGEMFPNQIRGSSLAVAGAAQWIANFAITISFPMLLAGIGLAGAYGL
                     YAAAAGLSIVFVLACVRETRGKELEAMGDI"
     gene            933..2558
                     /locus_tag="VFM52_07135"
     CDS             933..2558
                     /locus_tag="VFM52_07135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014091441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="family 43 glycosylhydrolase"
                     /protein_id="HET8764979.1"
                     /translation="MQRSRRNLIKLALASATAPLALPALAATPCVDDRKRGVQPRPGV
                     EGQRRADLGNGTYWNPIVAGDHPDPTILRDGADYYMTSTSFESCPGLLIWHSTDLVSW
                     APLKPALTRPLGNVFAVDLCKYGDRYFLYIPAMAPDHGWTIYVTWAEHIEGPWSEPLD
                     MGIHDCIDPGHVVGEDGKRYLFVNGIRYVRLRDDGLAPDGELRHAYSPWHYPADWVVE
                     DFAPEGPKLLRHDGWFYLISAVGGTAGPPTSHMVIAARSKSVHGPWENCPHNPLVHTA
                     SADEPWWSRGHATLVEGPAGDWWMVYHGYENGFRTLGRQTLLEPIEWTADGWFRATGG
                     DLSRPLPKPAGGRTGPAGLALSDPCSTSELGVQWSLHAAGPHDLERIRCSAHGMRLAA
                     QGHSPADSAPLTCIPGDRAYEAEVDIELEGDAEAGLLLFYNHQAFVGFGFTPREMKTF
                     EYAAEQPWMRAAMPTQRVRLRLSSIGQVVTFHYSHDGGKSWTQHPMRMEVSGLHHNVF
                     GGFLSLRIGIYCAGQGAAVMHQFRYRALADRVA"
     gene            complement(2682..4340)
                     /locus_tag="VFM52_07140"
     CDS             complement(2682..4340)
                     /locus_tag="VFM52_07140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007511678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004555 - alpha,alpha-trehalase activity
                     [Evidence IEA];
                     GO_process: GO:0005991 - trehalose metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="trehalase family glycosidase"
                     /protein_id="HET8764980.1"
                     /translation="MKFRTRLAALLLAAASAPVAGAATPDRAKTLDYIHHAWSTLTRR
                     MADCSAFGKGPGDTHLVIYLPHQLPMPEALPRVAQACHVEVRRLPQTIRQLGEFDAAT
                     LPVQGLLYLPHPYVVPGGFFNEMYGWDSYFIELGLLADHHEALARDMVDNALFEVQHY
                     GGVLNANRSYYLSRSQPPFLSAMMAALLADPASFRDDADQRAWLAQAYPLAVRNHDLW
                     LRPEHRAGDTGLARYFDYGHGPVLEAHDAGYYQGVIRWLLAHRADDPGYLLKASQHPD
                     ATEAARLKTTSCDVASSQVCADAWVDGYRLSADYYLGDRAMRESGFDVNFHFGPYAGL
                     THHYAAVGLNSLLYRYERDLHDFAAALGKTADAAQWAQAAAARKAAMDKYLWQPAQGM
                     YMDYDFVAGKPSTDPYLNTFYPLWAGAASSEQAQALRGKLALFEQRGGLAMSTRATGA
                     QWDAPYGWAPTNWLAIAGLDAYGFHADARRLAGKFMASVDRGYADDGTIREKYNMAQG
                     NAAVKITAGYTQNVVGFGWTNGVYLKLHQLLEGAATGKPAARVR"
     gene            complement(4337..6604)
                     /locus_tag="VFM52_07145"
     CDS             complement(4337..6604)
                     /locus_tag="VFM52_07145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018974085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 65 protein"
                     /protein_id="HET8764981.1"
                     /translation="MKRVAIALALVALATAPAFAATDASFVLQASAADWARYFPGQLG
                     DGYASTLTAPRGTEDTPAYLVAFMDRTPGDMARPAVVPAWSGIDYRAAGDAWLNAAPL
                     DTAHFQAYAQTLDMHDGTLATRYAYHDGERSTDVEVLSLVSQAAPHLAGSQLTLTPHF
                     DGRVELSFALDAWAPHQPRFALARITDAEMHRELAKHHLKLEPVAPATPDRAALWYPG
                     TTGVLAHDGDATRLTLWLDGRAANGATMAEAAAVSLPQGMHPVSAKVVRDGLRLALAV
                     VVDVQRNHRYRFAKFVAVSREGWGGDAQTDLALATQAREQGFDALLRAQRDAWHALWK
                     SDVVIDGDPAAQRIVHADLYYLLSNVTPDTAWATGGCGMTPGYAGHVFWDSDTWVFPA
                     LLLLHPDRATSLVAFRARTLPAAEARARARGLRGAMYPWEADPDDGSSQTPHSAQVLD
                     EREIHVNGDVAIAQWQYWLASGDKAWLRQHGWPVIRAVADFWISRATWKAAKQRWEIE
                     HVTSVDEDYSDVPNDTYTNAVARKALRIATAAAAVVGATPDPRWANVADGLYLPFSDQ
                     DGHHLDFDPSVPHDRDTWGGSSLPMLALPSLDLPMDQAVRRRDYAYALGPIEHSSHDP
                     NSMGLAPLSIAAATAGDTADADKWFDRNLKAHVVQPPFDVRTETAHNNTGYFLTASAG
                     MLQNILYGFTGLRIEPKGLVPAYAPMLPAPWKSLTLRDVTFRNRHYDITVRRGASGKP
                     VLSMITIRSTGDTSP"
     gene            complement(6601..>7411)
                     /locus_tag="VFM52_07150"
     CDS             complement(6601..>7411)
                     /locus_tag="VFM52_07150"
                     /inference="COORDINATES: protein motif:HMM:NF025134.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="putative 2OG-Fe(II) oxygenase"
                     /protein_id="HET8764982.1"
                     /translation="LRHAPDAAPARNLLAAALLGIGDAARALSQCEALLARTPDDQYL
                     IALQTTAWRMLGDPRHDAYCDYAQLVRPCRLPTPSGWADLAGFLADLRHALERLHDPH
                     GHPLLFQSLRHGTETTGNLARSTDPVVQALFRAFDAPIRDYLAQIGHGDDALRRRNRD
                     GYRFNGGWSVRLRDAGFHANHVHPRGWISSAFYVDLPEVMADPAAPGGNLTFGAPGIL
                     ATPALDAQHGVHPEPGMLVLFPSYVWHGTVPFHSEQARLTVAFDAVPGAPA"
BASE COUNT         1061 a         2455 c         2743 g         1152 t
ORIGIN      
        1 gcggcgggtt cgtctaccga agcgctgtgg ctgggccagg acgcctggcg ctggatgttc
       61 tggatgcagg tattgccctc gtcgctgttc ctggtctcgc tgctgttcat tcccgagagc
      121 ccgcgcttcc tggtggtgcg caagcgcgaa caggaggcgg ccggggtgct ggagcggctc
      181 tacggcgagt ccgaggcgcg cgccaaactg gcggagatcc gcgcctcgct ggcgcaggac
      241 cggcatcgcc cgaaactgtc cgacctgatc gacaagagcc gccggcgcat ccgccccatc
      301 gtctgggtgg gcgtgggcct ggccacgttc cagcagctgg tcggcatcaa cgtggtgttc
      361 tattacggcg cggtgctgtg gcaggcggtc ggtttttccg aaagcgacgc gctgctcatc
      421 aacgtgctgt ccggcgcgct cagcatcggc gcttgcctga ttgccgtgat gctgatcgac
      481 cgcatcgggc gcaagccgct gctgtggatc ggctcggtgg gcatgaccat caccctggcg
      541 gtggtggcgt gggccttcct gcaggccgat gcgggcgcgg cgggcaagct gagcctgccg
      601 cccgcgatgg gcgtcaccgc gctggtcgcc gccaacgcct acgtggtgtt tttcaacatg
      661 tcgtggggcc cggtgatgtg ggtgatgctg ggcgagatgt tccccaacca gatccgcggt
      721 tcgagcctgg cggtggccgg cgccgcgcaa tggatcgcga acttcgcgat caccatcagc
      781 ttcccgatgc tgctggccgg cattggcttg gccggcgcct acggcttgta tgccgcggcc
      841 gcgggcttgt cgatcgtgtt tgtcctggcc tgcgtgcggg aaacccgcgg caaggagctg
      901 gaggcgatgg gcgatatttg aggactccgt cgatgcaacg ctcccgccgc aacctcatca
      961 agctcgcatt ggccagcgcg accgcgccgc tggcgctgcc cgcgctggcc gccacgccgt
     1021 gtgtggacga ccgcaagcgc ggcgtgcagc cacggccggg cgtggagggc cagcgccgcg
     1081 ccgacctcgg caatggcacg tactggaatc cgatcgtggc gggcgaccac cccgacccga
     1141 cgatcctgcg cgacggcgcc gactactaca tgacgtccac gtcgttcgag tcctgccccg
     1201 gcctgctgat ctggcactcg accgacctgg tgagctgggc gccgctgaag cccgccctga
     1261 cgcgcccgct gggcaacgtg ttcgccgtcg acctgtgcaa atacggcgac cggtatttcc
     1321 tctacatccc ggcgatggcg cccgaccacg gctggacgat ctacgtgacc tgggcggagc
     1381 acatcgaagg cccgtggagc gagccgctcg acatgggcat ccacgactgc atcgaccccg
     1441 gccatgtggt gggcgaggac ggcaagcgct acctgttcgt caacggcatc cgctacgtgc
     1501 gcctgcgcga cgacggcctg gcccccgacg gggaactgcg ccatgcctac agcccgtggc
     1561 actaccccgc cgactgggtc gtggaggact tcgcgcccga aggccccaag ctgctgcgcc
     1621 acgacggctg gttctatctg atttcagcgg tcggtggcac ggccgggccg ccgaccagcc
     1681 acatggtgat cgcggcgcgg tcgaagtcgg tgcacgggcc gtgggagaac tgcccgcaca
     1741 atcctctcgt gcacaccgcc agcgccgacg agccgtggtg gtcgcgcggg cacgccacgc
     1801 tggtcgaagg cccggcgggc gactggtgga tggtgtacca cggctacgaa aatgggttcc
     1861 gcacgctggg ccggcaaacc ctgctggagc cgatcgagtg gacggcggac ggctggttcc
     1921 gcgccaccgg tggcgacctg tcgcgcccgt tgccgaagcc ggccggcggg cgcaccgggc
     1981 cggccgggct tgcgctgtcc gatccgtgtt ccaccagcga gcttggtgtg cagtggagcc
     2041 tacatgccgc cgggccgcac gacctcgaac gcatccgctg cagcgcccac ggcatgcggc
     2101 ttgcggcgca gggccactcg cccgcggaca gcgcgccgct cacctgcata cccggcgacc
     2161 gcgcctacga ggcggaggtc gacatcgagc tggaaggcga tgcggaagcc ggcctgctgc
     2221 tgttctacaa ccaccaggcc ttcgtcgggt tcggcttcac gccgcgcgaa atgaagacct
     2281 tcgaatacgc cgccgaacaa ccgtggatgc gcgcggcgat gccgacgcag cgcgtgcggc
     2341 tgcggctttc cagcatcggc caggtggtga ccttccacta ctcccacgac ggcggcaaaa
     2401 gctggaccca gcacccgatg cggatggaag tctccggcct gcaccacaac gtgttcggcg
     2461 gcttcctgag cctgcgcatc ggcatctact gcgccggcca gggcgcggcg gtcatgcacc
     2521 agttccgcta tcgcgcgctg gcggatcgcg tcgcctgacg ctgctgcgcg caggggcgac
     2581 ggccgcgtcg gcgcttgtcg cgccgtgcgg cgaaacgcga tcagcgccag cacgaagcac
     2641 gcaagaagct acggcggcgc ctcgcgtgcc gcgggtgacg ctcatcgcac tcgggctgcc
     2701 ggcttgccgg tcgcggcgcc ttcgagcaac tggtgcagct tcaggtacac gccgttggtc
     2761 cagccgaagc cgaccacgtt ctgcgtgtag ccggcggtga tcttcaccgc ggcgttgccc
     2821 tgcgccatgt tgtatttctc gcggatggtg ccgtcgtcgg cgtagccgcg atccacgctg
     2881 gccatgaact tgccggcgag gcggcgcgcg tcggcgtgga agccgtaggc gtccaggccg
     2941 gcgatggcga gccagttggt cggtgcccag ccgtagggcg cgtcccattg cgcgccggtg
     3001 gcgcgcgtgc tcatcgccag gccgccgcgt tgctcgaaca gtgcgagctt gccgcgcagc
     3061 gcctgcgcct gctcgctgga agccgcgccc gcccacagcg ggtagaacgt gttgaggtag
     3121 ggatcggtcg agggcttgcc ggccacgaag tcgtagtcca tgtacatgcc ttgcgcgggc
     3181 tgccacaggt acttgtccat tgccgccttg cgcgcggcgg ccgcctgcgc ccactgcgcc
     3241 gcgtcggcgg tcttgccgag cgccgcggcg aaatcgtgca ggtcgcgctc gtagcggtag
     3301 agcaggctgt tcaggcccac cgccgcgtag tggtgggtga ggccggcgta ggggccaaag
     3361 tggaagttca cgtcgaagcc cgactcgcgc atcgcgcggt cgccgaggta gtagtcggcg
     3421 ctgaggcgat aaccgtcgac ccacgcgtcg gcacaaacct gcgagctcgc gacgtcgcag
     3481 ctcgtggtct tcaaccgcgc tgcttcggtg gcgtcgggat gctgcgatgc cttgaggaga
     3541 tagccgggat cgtcggcgcg gtgcgccagc agccagcgga tcacgccctg gtagtagccg
     3601 gcgtcgtgcg cctccagcac cgggccgtgg ccgtagtcga agtagcgcgc caggccggtg
     3661 tcgccggcgc ggtgttcggg tcgcagccag aggtcgtggt tgcgcactgc cagcggatag
     3721 gcctgcgcca gccaggcgcg ctggtcggcg tcgtcgcgga agctggcggg atcggccagc
     3781 agcgcggcca tcatcgcgga gaggaacggc ggttgcgaac ggctgaggta gtagctgcgg
     3841 ttcgcgttga gcacgccgcc gtagtgctgc acctcgaaca gcgcgttgtc caccatgtcg
     3901 cgcgccagcg cctcgtggtg gtcggcgagc aggcccagct cgatgaaata gctgtcccag
     3961 ccgtacatct cgttgaagaa gccgcccggc accacgtagg gatgcggcag gtagagcagg
     4021 ccttgcaccg gcaacgtggc ggcgtcgaac tcgccgagct ggcggatcgt ctgcggcagc
     4081 cggcgcacct cgacatggca agcctgggcg acgcgcggca acgcctccgg catcggcagt
     4141 tgatgcggca gatagatcac caggtgcgtg tcacccggtc ccttgccgaa ggcggaacag
     4201 tcggccatgc ggcgtgtgag cgtggaccag gcgtggtgga tgtagtcgag cgtcttcgcg
     4261 cggtcaggcg tcgcggcgcc agcgacgggc gcggacgccg ccgcgagcag cagggcggcg
     4321 agacgggtgc ggaatttcat ggcgaggtgt ctccggtgga acggatggtg atcatcgaca
     4381 gcaccggctt gccgctggcg ccgcggcgca cggtgatgtc gtaatgccgg ttgcggaagg
     4441 tgacgtcgcg cagcgtcagc gacttccatg gcgcgggcag cattggcgca taggccggca
     4501 ccaggccctt gggttcgatg cgcaggccgg tgaagccgta gaggatgttc tgcagcatgc
     4561 cggcgctggc ggtgaggaaa tagccggtgt tgttgtgcgc ggtctcggtg cgcacgtcga
     4621 acggcggctg caccacgtgc gccttgaggt tgcggtcgaa ccacttgtcg gcatccgcgg
     4681 tgtcgccggc ggtggccgcg gcgatcgaca gcggggcgag acccatgctg ttggggtcgt
     4741 ggctcgaatg ctcgatcggg cccagcgcgt aggcgtagtc gcggcggcgc acggcctggt
     4801 ccatcggcag atccagcgaa ggcagcgcga gcatcggcag cgagctgccg ccccaggtgt
     4861 cgcggtcgtg cggcacggag ggatcgaagt cgaggtggtg gccgtcctgg tcggagaacg
     4921 gcaggtacaa gccatccgcc acgttggccc agcgtggatc gggcgtggcg ccgaccacgg
     4981 ccgcggcggc cgtggcgatg cgcagcgcct tgcgcgccac ggcattggtg taggtgtcgt
     5041 tgggcacgtc gctgtagtcc tcgtccaccg aggtgacgtg ctcgatttcc cagcgttgtt
     5101 ttgcagcctt ccaggtggcg cgactgatcc agaagtcggc gacggcgcgg atcaccggcc
     5161 agccgtgctg ccgcaaccat gccttgtcgc cgctggccag ccagtactgc cactgcgcga
     5221 tggcgacgtc gccgttgacg tggatctcgc gctcgtcgag cacctgggcc gagtgcggcg
     5281 tctgcgagct gccgtcgtcg ggatcggcct cccacgggta catcgcgccg cgcaggccgc
     5341 gggcacgggc gcgcgcctcg gcggccggca gcgtgcgcgc gcggaacgcc accagcgacg
     5401 tcgcgcgatc cggatgtagc aggagcaggg cggggaacac ccaggtatcg ctgtcccaga
     5461 acacgtgccc ggcgtagccc ggcgtcatgc cgcagccacc ggtggcccac gccgtgtccg
     5521 gcgtcacgtt ggacagcagg taatagaggt ccgcgtgcac gatgcgctgc gcggcggggt
     5581 cgccgtcgat cacgacatcg gacttccaca gcgcatgcca ggcgtcccgt tgcgcgcgca
     5641 gcagcgcgtc gaagccctgt tcgcgcgcct gggtggccag cgcgagatcg gtctgcgcgt
     5701 cgccgcccca accttcgcgc gagaccgcga cgaacttggc gaagcggtaa cggtggttcc
     5761 tctgcacatc caccaccacg gccagcgcga gccgcaggcc gtcgcgcacc accttggccg
     5821 aaaccgggtg catgccttgc ggcagcgaca cggctgccgc ctcggccatc gtggcgccgt
     5881 tcgcagcgcg gccatcgagc cacagggtga gccgcgtggc gtcgccatcg tgggccagca
     5941 ccccggtggt gccggggtac cacagcgcgg cgcggtccgg tgtggcgggt gcgaccggct
     6001 ccagcttcag gtggtgcttg gcgagctccc ggtgcatttc cgcatcggtg atgcgggcca
     6061 gcgcgaagcg cggctggtgc ggcgcccagg cgtccagcgc gaacgacagc tccacgcggc
     6121 cgtcgaaatg cggcgtgagg gtgagctggc tgccggcgag gtgcggcgcg gcctggctca
     6181 ccagcgagag gacttcgaca tcggtgctgc gttcgccatc gtggtaggca tagcgcgtgg
     6241 ccagcgtgcc gtcgtgcatg tccaaggtct gtgcgtaggc ctggaaatgc gcggtatcca
     6301 gcggcgcggc gttgagccag gcgtcgcccg cggcgcggta gtcgatgccg ctccacgcgg
     6361 gcacgacggc ggggcgcgcc atgtcgccgg gcgtgcggtc catgaaggcg acgagataag
     6421 ccggtgtgtc ttcggtgccg cgcggtgcgg tcagcgtgga ggcgtagccg tcgcccagct
     6481 ggccggggaa ataacgggcc cagtccgcgg cgctggcctg cagcacgaag ctggcgtcgg
     6541 tggcggcaaa cgcgggcgcc gtcgccaacg cgaccaacgc caaggcgatg gcgacgcgtt
     6601 tcatgccggc gctcccggca ccgcgtcgaa ggccacggtg agccgcgcct gctcgctgtg
     6661 gaacggcacg gtgccgtgcc agacgtagga ggggaacagc accagcatgc cgggctcggg
     6721 atgcacgccg tgctgcgcgt ccagcgccgg ggtggcgagg atgcccggtg cgccgaaggt
     6781 caggttgccg cccggcgcgg cggggtcggc catcacttcc ggcaggtcga cgtagaacgc
     6841 cgacgagatc cagccgcgcg gatgcacgtg gttggcatgg aatcccgcgt cgcgcaggcg
     6901 caccgaccag ccgccgttga accggtagcc gtcgcggttg cgccggcgca gggcgtcgtc
     6961 gccgtggccg atctgggcga ggtaatcgcg gatcggcgcg tcgaaggcgc ggaacagcgc
     7021 ctggaccacc gggtcggtgc tgcgggcgag gtttcccgtg gtttcagtgc cgtgccgcag
     7081 cgactggaac agcagcggat ggccgtgcgg atcatgcagg cgttccagcg cgtgcctgag
     7141 gtcggcgagg aaaccggcga gatccgccca ccccgatggc gtcggcagac ggcagggacg
     7201 caccagttgg gcgtagtcgc agtacgcatc gtggcgcgga tcgccgagca tccgccatgc
     7261 ggtggtctgc agcgcgatca ggtactggtc gtcgggcgtg cgcgccagca gcgcctcgca
     7321 ttgggaaagc gcgcgcgccg catcgccgat gccgagcagg gccgcggcca gcaggttgcg
     7381 tgccggtgcg gcgtccggcg catggcgcag t
//
LOCUS       DASSVL010000409         2053 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1379224,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000409 DASSVL010000000
VERSION     DASSVL010000409.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2053)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2053)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2053
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1379224"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..597
                     /locus_tag="VFM52_07155"
     CDS             <1..597
                     /locus_tag="VFM52_07155"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HET8764983.1"
                     /translation="STTLSAPLATELGHARAYACDATDPDAVTRTLAQVAAELGPVDA
                     LAYNAGSGSWGSVEEVSAADLESAWKLNVLGAFAAIRAVLPVMRSRGAGSIVFIGATA
                     SRRGGAGAAAFAQAKAAQRALAESTARYAWPAGIHVALVIIDGMVDLPRTRARMPDKP
                     DAFFVQPDGVADTVYALTQQARSAWSFEVEARPFGEKW"
     gene            complement(610..1320)
                     /locus_tag="VFM52_07160"
     CDS             complement(610..1320)
                     /locus_tag="VFM52_07160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LytTR family DNA-binding domain-containing
                     protein"
                     /protein_id="HET8764984.1"
                     /translation="MRILIADDEPLARARLAALLRDCGDVEVVAAVGDGEAALVACAE
                     LRPELLLLDIAMPGLDGIGVARRLAALPRPPQLVFCTAYEEHALTAYELRAADYLLKP
                     VRIERLREALERARALQARVAAPDASLPAQAHGAPLRVPLADVLYLTADDKYVTVHRL
                     AGDALCEWSLKAIEEAFPARFVRVHRACLVPGERLLGLVRDADGTLRALIAGSDATPE
                     VSRRNLAAVRRLLRGDPA"
     gene            complement(1301..>2053)
                     /locus_tag="VFM52_07165"
     CDS             complement(1301..>2053)
                     /locus_tag="VFM52_07165"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008213569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HET8764985.1"
                     /translation="VASAVVAWLDRALGTGLTPASSTRFVTGNTLLAALLSAALLRYF
                     QVLAEWRARLAAVTRAQFDALQARIRPHFLYNSMNTVAALVRVDPDAAERTVLDLSEL
                     FRAALGADDKPGTLAGELALIDRYLAIEQLRLGDRLRVERDLAALPGDLPMPALLLQP
                     LVENAIYHGIQPRREGGTLAIAGRRTDTGVEIEIRNPLPDGASPAGSGHGLENVRRRI
                     AYHFGGRGALETTQADGEFRVRVRLPYAHPDC"
BASE COUNT          307 a          732 c          728 g          286 t
ORIGIN      
        1 agcaccaccc tgtccgcgcc gctggcgacc gaactcggcc atgcgcgcgc ctacgcatgc
       61 gacgcgaccg atcccgatgc ggtgacgcgc acgctggcgc aggtcgcggc ggaactcggc
      121 cccgtcgatg cgctcgccta caacgccggt tccggcagtt ggggcagcgt cgaggaagtc
      181 agcgcggccg atcttgaaag cgcgtggaag ttgaacgtgc tgggcgcctt cgccgcgatc
      241 cgcgcggtgt tgccggtgat gcgctcgcgc ggtgcaggca gcatcgtctt catcggcgcc
      301 accgcatcgc ggcgcggggg cgcgggcgcg gcagcgtttg cgcaggccaa ggcggcccag
      361 cgtgcgctgg ccgaatcgac cgcgcgctac gcctggccgg ccggcatcca tgtggcgctg
      421 gtgatcatcg acggcatggt ggacctgccg cgcacccgcg cgcggatgcc ggacaagccg
      481 gatgccttct tcgtgcagcc cgacggggtc gccgacacgg tgtacgcgtt gacgcagcag
      541 gcgcgctcgg cgtggtcgtt cgaggtcgag gcgcggccgt tcggcgaaaa atggtagccg
      601 cgggcggcgt caggccggat cgccgcgcag caagcggcgc accgcggcca ggttgcgccg
      661 actgacttcc ggcgtcgcgt cgctgccggc gatgagcgcg cgcagcgtgc catcggcatc
      721 gcgcaccagc cccagcaggc gctcgcccgg caccagacat gcgcggtgga cgcgcacgaa
      781 gcgtgcggga aaggcttcct cgatggcttt cagcgaccac tcgcacagtg catcgcccgc
      841 gagccgatgc acggtgacgt atttgtcgtc cgccgtgaga tacagcacgt cggccagcgg
      901 caccctgagc ggcgcgccgt gggcctgcgc cggcaggctg gcatcgggcg ccgccacgcg
      961 cgcctgcaac gcccgcgcac gctcgagtgc ttcgcgcagg cgctcgatgc gcacgggctt
     1021 caagaggtaa tccgccgcgc gcagttcgta cgcggtcagc gcgtgttctt catacgcggt
     1081 gcagaacacc agctgcggcg gccgcggcag cgccgccagc cggcgcgcga cgccgatgcc
     1141 atccagaccc ggcatcgcga tgtcgagcag cagcagttcg gggcggagtt ccgcgcacgc
     1201 caccaacgca gcctcgccgt cgccgaccgc cgcgaccact tcgacatcgc cgcagtcgcg
     1261 cagcagcgcc gcgaggcgcg cgcgcgccag cggttcgtcg tcagcaatca ggatgcgcat
     1321 acggcagtct tactcgcacg cggaattcgc cgtcggcctg cgtggtttcg agcgccccgc
     1381 gcccaccgaa gtggtatgcg atgcggcggc ggacgttttc gagcccgtgc ccgctgcccg
     1441 cgggcgaagc gccatccggc agggggttcc tgatttcgat ctcgacaccg gtatccgtgc
     1501 gtcgtccggc aatcgccagc gtgccgccct cgcggcgcgg ctggatgccg tggtagatcg
     1561 cgttttcgac cagcggctgc agcagcaacg ccggcatcgg caggtcgcct ggcaaggcag
     1621 caaggtcacg ctcgacacgc aagcgatcgc cgaggcgcag ttgttcgatc gcgagataac
     1681 ggtcgatcag tgccaactcg cccgccagcg tgccgggctt gtcgtcggcg cccagggcgg
     1741 cgcggaacag ttccgacagg tcgagcaccg tgcgctcggc cgcatcggga tcgacccgca
     1801 ccagcgcggc gacggtgttc atgctgttgt agaggaaatg cggccggatc cgcgcctgca
     1861 gcgcatcgaa ctgggcgcgc gtgacggccg ccaaccgcgc gcgccattcc gccagtacct
     1921 ggaagtagcg cagcaacgca gcactcagca gcgccgccag cagggtgttg ccggtgacga
     1981 aacgcgtgct cgacgctggc gtcagcccgg ttcccagtgc gcgatccagc cacgccacca
     2041 ccgcgctggc gac
//
LOCUS       DASSVL010000410         2490 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_602665, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000410 DASSVL010000000
VERSION     DASSVL010000410.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2490)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2490)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2490
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_602665"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..464
                     /locus_tag="VFM52_07170"
     CDS             <1..464
                     /locus_tag="VFM52_07170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007080372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glycoside hydrolase domain-containing protein"
                     /protein_id="HET8764986.1"
                     /translation="EDISGLIGYYAHGNEPSHHIAYLYDYAGAPWKTQQRLKQIMDSQ
                     YAARPDGLSGNDDLGQMSAWYIFTALGFYPVTPASDVYALGRPFVPKAVLHLPNGHTF
                     TIVAEHLDGAHPYVGRITLNGKPLDGVFLHHGEILAGGELRFTMQAEPAKR"
     gene            complement(492..1184)
                     /gene="phoU"
                     /locus_tag="VFM52_07175"
     CDS             complement(492..1184)
                     /gene="phoU"
                     /locus_tag="VFM52_07175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008436483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0051049 - regulation of transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate signaling complex protein PhoU"
                     /protein_id="HET8764987.1"
                     /translation="MTNHLIKSYDDELIRLTNELVRMGELATHQLEAAMDAVERRDVE
                     AAQRVVDDDDAIDLLEREIGQDVVRLLALRAPMAGDLRNVFAALRIASDIERIGDYAA
                     NVAKRSIPLSQGAPIAPTGGLAHLAELATIAVREVLDAWRERDGERARQVWLDDTQLD
                     DAWTGYFRQLLTYMMEDPRHITPCTHLLFMAKNIERIGDHATNIAENVWFVVYGKPLP
                     ELRAKHDRTSEA"
     gene            complement(1243..2016)
                     /gene="pstB"
                     /locus_tag="VFM52_07180"
     CDS             complement(1243..2016)
                     /gene="pstB"
                     /locus_tag="VFM52_07180"
                     /EC_number="7.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008212301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015415 - ATPase-coupled phosphate ion
                     transmembrane transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter ATP-binding protein
                     PstB"
                     /protein_id="HET8764988.1"
                     /translation="MTDPVAPPAKIAVRGLDFHYRASHALKGISLDIPARQVTAIIGP
                     SGCGKSTLLRVFNRIYAIYPGLTAGGEVLLDGENILDSRYPLNRLRSKVGMVFQKPVP
                     FPMTIFENVAWGIRHHERLGKADMADRVEHALRRAALWDEVKDKLKASALGLSGGQQQ
                     RLCIARGIALRPEVLLLDEPTSALDPLATGRIEQLVEELKGDYTIVIVTHNMQQAARI
                     SDRTAFMYLGELIEFDLTEKIFTRPKQKRTEDYITGRYG"
     gene            complement(2009..>2490)
                     /locus_tag="VFM52_07185"
     CDS             complement(2009..>2490)
                     /locus_tag="VFM52_07185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014403714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HET8764989.1"
                     /translation="PMSNLTHGAVSFSGFAGAVALALIGLPVIVRTTDEMLQLVPGTL
                     REAALSLGIPQWKVTVQILMRAATSGIATGVLLALARLAGETAPLLFTAFGNNFMVAN
                     PLDKMASVPVAIYQYTNDPNPALHAIAWAGALLIALAVLALSLATRLLFLRHKVRHD"
BASE COUNT          382 a          791 c          895 g          422 t
ORIGIN      
        1 tcgaggacat ctccggcctg atcggttact acgcgcacgg caacgaaccc agccaccaca
       61 tcgcctacct gtacgactac gccggcgcgc cgtggaagac ccagcagcgg ctgaagcaga
      121 tcatggacag ccagtacgcc gcgcgtcccg atggcctgtc cggcaacgac gacctgggcc
      181 agatgtcggc gtggtacatc ttcaccgcgc tgggcttcta cccggtgacc ccggccagcg
      241 acgtctacgc gctcggccgg ccgttcgtgc cgaaggcggt gctgcacctg ccgaacggtc
      301 acaccttcac catcgtcgcc gagcacctgg acggggcgca cccctacgtc ggccgcatca
      361 ccttgaacgg caagccgctg gatggggtgt tcctgcatca cggcgagatc ctcgccggcg
      421 gcgagttgcg cttcaccatg caggcggagc cggcgaaacg ctgacgtcgc gttgcgcggc
      481 ccgccgccgc ttcaagcctc gctggtgcgg tcgtgcttgg cgcgcagctc gggcaggggc
      541 ttgccgtaca cgacgaacca gacgttctcg gcgatgttgg tggcgtggtc gccgatgcgc
      601 tcgatgttct tcgccatgaa cagcaggtgc gtgcatggcg tgatgtggcg cgggtcttcc
      661 atcatgtagg tgagcagctg gcggaagtag ccggtccacg cgtcatcgag ctgggtgtcg
      721 tccagccaga cctggcgcgc acgctcgccg tcgcgctcgc gccacgcgtc gagcacctcg
      781 cgcacggcaa tggtggcgag ttcggcgaga tgggcgaggc cgccggtggg ggcgatcggc
      841 gcgccctgcg acagcgggat ggaacgcttg gcgacgttgg cggcgtagtc gccgatgcgc
      901 tcgatgtcgg aggcgatgcg cagcgcggca aacacgttgc gcaggtcgcc ggccatcggc
      961 gcgcgcagcg cgagcaggcg aaccacgtcc tggccgatct cgcgctccag caggtcgatt
     1021 gcatcgtcgt cgtccacgac gcgctgcgcg gcctcgacgt cgcggcgttc cactgcgtcc
     1081 atcgcggcct ccagttgatg cgtggccagt tcgcccatgc gcaccagttc attggtgagc
     1141 cggatcaatt cgtcgtcgta gcttttgatg aggtggttgg tcatggccgt ggcctcggag
     1201 atgggggagg gcttgggaat ccgcgtttcc gatctggcgc gatcacccat accttccggt
     1261 gatgtagtcc tcggtgcgct tctgcttggg gcgggtgaag atcttctcgg tgaggtcgaa
     1321 ttcgatcagc tcgcccaggt acatgaaggc ggtgcggtcg gagatgcgcg cggcctgctg
     1381 catgttgtgg gtgacgatga cgatggtgta gtcgcccttg agctcttcca ccagctgctc
     1441 gatgcggccg gtggcgaggg ggtccagtgc ggaggtgggc tcgtcgagca acagtacctc
     1501 gggccgcagc gcgatgccgc gcgcgatgca caggcgctgc tgctggccgc cggagaggcc
     1561 gagcgcgctc gccttcagct tgtcctttac ctcgtcccac agcgcggcgc ggcgcagcgc
     1621 gtgttccacg cgatcggcca tgtcggcctt gcccaggcgc tcgtggtggc ggatgcccca
     1681 ggccacgttc tcgaagatcg tcatcgggaa cggcaccggc ttctggaaca ccatgccgac
     1741 cttgctgcgc aagcggttga gcgggtagcg cgaatcgagg atgttctcgc cgtcgaggag
     1801 tacttcgccg ccggccgtga ggccgggata gatcgcgtag atgcggttga acacgcgcag
     1861 cagggtggac ttgccgcagc cggaagggcc gatgatggcg gtgacctggc gggccgggat
     1921 gtccaggctg atgcccttca gggcgtggct ggcgcggtag tggaaatcga gcccgcgcac
     1981 ggcgatcttg gcgggcgggg cgacaggatc agtcatgacg caccttgtgg cggaggaaca
     2041 gcaggcgggt ggcgaggctc aacgccagga cggcgagcgc gatcagcagc gcgccggccc
     2101 aggcgatggc gtgcagggcg ggattggggt cgttggtgta ctggtagatc gccaccggca
     2161 cgctggccat cttgtccagc ggattcgcca ccatgaagtt gttgccgaat gcggtgaaca
     2221 gcagcggcgc ggtttcgccg gccagccgcg ccagcgccag cagcacgccg gtggcgatgc
     2281 cggaagtcgc cgcgcgcatc aggatctgca cggtgacctt ccactgcggg atgcccagcg
     2341 acagcgccgc ctcgcgtagc gtgccgggta cgagctgcag catttcatcc gtggtgcgca
     2401 cgatcaccgg caggccgatc agggccagcg ccaccgcgcc ggcgaacccg gagaacgaca
     2461 ccgcgccatg ggtgaggttc gacatcggca
//
LOCUS       DASSVL010000411         5746 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1308651,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000411 DASSVL010000000
VERSION     DASSVL010000411.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 5746)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5746)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5746
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1308651"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..474
                     /gene="ccsA"
                     /locus_tag="VFM52_07190"
     CDS             <1..474
                     /gene="ccsA"
                     /locus_tag="VFM52_07190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007510505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis protein CcsA"
                     /protein_id="HET8764990.1"
                     /translation="APPTTPLPLDWQISLHVAIALLGYSLLSIAAVVAVLLAVQERAL
                     RTHRPIRLVRALPPLTQTESLLFRLIGAGFALLTLTLLSGLLFIQNIRAQHLIHTTVL
                     SVVAWLIFGTLLWGRWKHGWRGRSAVNLCLVGMAVLLLAFFGSKAVLELVLHRTV"
     gene            complement(506..1561)
                     /gene="obgE"
                     /locus_tag="VFM52_07195"
     CDS             complement(506..1561)
                     /gene="obgE"
                     /locus_tag="VFM52_07195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018971329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase ObgE"
                     /protein_id="HET8764991.1"
                     /translation="MKFVDEAIIHVQAGAGGNGCASFRREKFIPFGGPDGGDGGDGGS
                     VWMVADEGLNTLVDFRHQRHFKAQRGQGGMGSQMYGKGGEDTTIRVPVGTVITNVDTD
                     EVIGDLTAHGRRLLVARGGKGGLGNMHFKSSVNRAPRQFTNGTPGEERDLKLELRLLA
                     DVGLLGFPNAGKSTFIRAVSAATPRVADYPFTTLHPSLGVVRLGTDQSFVIADIPGLI
                     EGAADGAGLGIQFLRHVSRTSLLLHLVDIAPVDDTDPVEQVRAIEQELAKFDPELLER
                     PRWLVLNKADALPEDERQSVAEAIVRRLDWQQPWFLVSALARDNTMAVCQQVQRFFEE
                     QREASAAQRGTPSPSAA"
     gene            complement(1744..2001)
                     /gene="rpmA"
                     /locus_tag="VFM52_07200"
     CDS             complement(1744..2001)
                     /gene="rpmA"
                     /locus_tag="VFM52_07200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019465502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L27"
                     /protein_id="HET8764992.1"
                     /translation="MAHKKGVGSSRNGRDSNPKYLGVKVYGGQAVSGGNIIVRQRGTQ
                     FHPGHGVGLGRDHTLFALTDGKVEFKVRGEHGRRFVSVVKG"
     gene            complement(2020..2334)
                     /gene="rplU"
                     /locus_tag="VFM52_07205"
     CDS             complement(2020..2334)
                     /gene="rplU"
                     /locus_tag="VFM52_07205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003247466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L21"
                     /protein_id="HET8764993.1"
                     /translation="MSYAVIKTGGRQFRVQQGDVLRVELLPAEEGATVTFNQVLLVGE
                     GESVTVGTPVVEGATVSATVRKHGRADKVRIIKFRRRKHHKKQMGHRQHFTEVEITGI
                     NA"
     gene            2523..5447
                     /gene="uvrA"
                     /locus_tag="VFM52_07210"
     CDS             2523..5447
                     /gene="uvrA"
                     /locus_tag="VFM52_07210"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007081758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrA"
                     /protein_id="HET8764994.1"
                     /translation="MDSIRIRGARTHNLKNIDVDLPRNQLIVITGLSGSGKSSLAFDT
                     IYAEGQRRYVESLSAYARQFLSMMEKPDIDSIEGLSPAISIEQKSTSHNPRSTVGTIT
                     EIYDYLRLLYARVGTPRCPDHGIPLEAQTVSQMVDATLAQDAAKRYMLLAPVIRERKG
                     EHVQVFEQLRAQGFVRARVDGVVYELDAVPPLGLRIKHTIEAVIDRFRPREDIKQRLA
                     ESFETALRLGDGLAIVADLDDPEAREQLYSSRYACPVCDYSLPELEPRLFSFNSPIGA
                     CPTCDGLGVTQVFDPARVVAHPELALSAGAVRGWDRRNPHYFQLILSLAAHYGFDVDT
                     PWRDLPKATREAILYGSGKDKIAFRYLTERGGKVTREHAFEGVLPNLERCYKETESPA
                     VRDELAKYISDTPCRECGGQRLNRAARNVFVADTALPVLTNRSINDALAFFGTLQLTG
                     WRGEIAAKIVKEIRERLTFLRDVGLDYLTLDRQADSLSGGEAQRIRLASQIGAGLVGV
                     MYVLDEPSIGLHQRDNERLLGTLTRLRDLGNTVIVVEHDEDAIRTADYVLDIGPGAGT
                     HGGEVVAQGAVKDLVAVPRSITGQFLSGERVIEVPKRRREPAADAWLRIRGAHGNNLK
                     HVDLAVPAGLFTCITGVSGSGKSTLINDTLYQLAAQELNGASGQPAPFESVDGMQLFD
                     KVVAIDQSPIGRTPRSNPATYTGLFTPLRELFAQVPEARARGYEAGRFSFNVRGGRCE
                     ACEGDGLIKVEMHFLPDVYVPCDACHGKRYNRETLEVLYKGHTIADVLDMTVEEALAL
                     FENVPTIARKLDTLRAVGLDYIKLGQSATTLSGGEAQRVKLSKELSRRDTGHTLYILD
                     EPTTGLHFHDIDQLLDVLHQLVDQGNTVVVIEHNLDVIKTADWIVDLGPEGGDGGGRI
                     IAQGTPETVAATPGSYTGQFLAPLLVKAHPARRPKKTKTTLKHVASLDKYKPLRARRK
                     AP"
     gene            5444..>5746
                     /locus_tag="VFM52_07215"
     CDS             5444..>5746
                     /locus_tag="VFM52_07215"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008213290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016790 - thiolester hydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase"
                     /protein_id="HET8764995.1"
                     /translation="MTTATPDTSAKAPTRRGKRAPTASVVPPAPATLFTASLAVRWRD
                     LDAFNHVNNSNYLTFLEEAHLQWLQQVRGEWFGEGSMPVLASSEVNYRRPIAWPAQL"
BASE COUNT          912 a         2047 c         1862 g          925 t
ORIGIN      
        1 gccccgccca ccacgccgct gccgctggac tggcagatca gcctgcacgt ggcgatcgcc
       61 ctgctcggct acagcctgct gtcgatcgcc gcggtggtgg cggtgctgct ggcggtgcag
      121 gaacgcgccc tgcgcacgca ccgtccgatc cggctggtgc gcgcgctgcc gccgctgacc
      181 cagaccgaat cgctgctgtt ccgcctgatc ggtgccggct tcgccctgct cacgctcacc
      241 ctgctgagcg gcctgctgtt catccagaac atccgcgccc agcacctgat ccacaccacc
      301 gtgctcagcg tggtggcgtg gctgatcttc ggcaccctgc tgtggggccg ctggaagcac
      361 ggctggcgtg gccgcagtgc cgtcaacctg tgcctggtcg gcatggccgt gctgctgctg
      421 gcgtttttcg gcagcaaggc cgtgctggag ctggtgctgc accggacggt ttaagaggac
      481 cggcgcccgg aaccagcgca gtggcttacg cggcgctggg tgaaggcgta ccgcgttgcg
      541 cggcgctggc ttcgcgttgc tcctcgaaga aacgctgtac ctgctggcac accgccatgg
      601 tgttgtcgcg cgccagcgcg gacaccagaa accacggttg ctgccaatcc agccgccgca
      661 cgatggcttc cgccacgctt tggcgctcgt cttccggcaa cgcgtcggcc ttgttcagca
      721 ccagccagcg cgggcgttcg aggagttccg ggtcgaactt ggcgagctcc tgctcgatcg
      781 cgcgcacctg ttccaccggg tcggtgtcgt ccaccggcgc gatgtcgacc aggtgcagca
      841 gcaggctggt gcgcgacacg tggcgcagga actggatgcc cagcccggcg ccgtcggcgg
      901 cgccctcgat caggcctggg atatccgcga tcacgaaact ctggtcggtg cccaggcgca
      961 ccacgcccag gctcgggtgc agcgtggtga acgggtaatc cgccacccgt ggcgtcgccg
     1021 ccgacaccgc gcggatgaag gtgctcttgc cggcattcgg gaaacccagc aggccgacat
     1081 cggccagcag gcgcagctcg agcttcaggt cgcgctcctc gcccggcgtg ccattggtga
     1141 actggcgcgg agcgcggttc accgagctct tgaaatgcat gttgcccagc ccgcccttgc
     1201 cgccgcgtgc caccagcagg cgccggccgt gcgcggtgag atccccgatc acctcatcgg
     1261 tgtcgacgtt ggtgatgacc gtgccgaccg gcacccggat cgtggtgtcc tcgccgccct
     1321 tgccgtacat ctggctgccc atgccgccct ggccgcgctg cgccttgaaa tgccgctggt
     1381 ggcgaaaatc caccagcgtg ttcaagccct cgtcggccac catccacacc gagccgccgt
     1441 cgccgccgtc gccgccatcc ggcccgccga acgggatgaa cttctcgcgc cggaaactcg
     1501 cgcacccgtt gccgccggcg ccggcctgga cgtggatgat ggcttcgtcg acgaatttca
     1561 tggtgggagc cggggtttga agtgggaggg gaaaacaccg tgcgccgcca gtctagcgat
     1621 ggtggcaacc cgcacgggcc ggggttgcgg gaaaccgccg tggcggcgcc ctgctcccga
     1681 ttcccttggt aaaaaaacaa aagccccgcg tgagcggggc tttcgctgca accgcgcgag
     1741 cggtcagccc ttcacgacgc tgacaaaccg tcgtccgtgc tcgccgcgaa ccttgaactc
     1801 gaccttgccg tcggtgagcg cgaacaaggt gtggtcgcgg ccgaggccga cgccgtgacc
     1861 cgggtggaac tgggtgccgc gctggcgcac gatgatgttg ccgccgctga ctgcctggcc
     1921 gccgtaaacc ttcacgccca ggtacttcgg gttcgaatcg cgaccgttgc ggctggaacc
     1981 tacgcccttt ttatgtgcca tgacttgtgc tccagttgct caggcgttga tgcccgtgat
     2041 ctcgacttcg gtgaaatgct gccggtgccc catctgcttc ttgtggtgct tgcggcggcg
     2101 gaacttgatg atgcgcacct tgtcggcgcg accgtgcttg cgcaccgtgg cggagaccgt
     2161 cgcaccctcg accaccggcg tgccgaccgt gaccgactcg ccctcgccaa ccagcaacac
     2221 ctggttgaag gtgaccgtgg cgccttcttc ggcgggcagc agctcgacgc gcaggacgtc
     2281 gccctgctgc acacggaact ggcggccgcc ggtcttgatg actgcgtaac tcatgggatg
     2341 gcccttctgt cgttattctc ttgggttccg tcacggccat gctcggccgg acgaaccgcg
     2401 gaggataccg gacgcgctcg gcgctggtca aatcctgacc atccccgccg ccggcagacc
     2461 ccaggacaat aagtaacctg cgcggtttga tatagtggtt ctttcgcttc gctgtttcac
     2521 gcatggactc catccgcatc cgcggcgcgc gcacccacaa tctcaagaac atcgacgtcg
     2581 acctgccgcg caaccagttg atcgtcatca ccgggctgtc cggttccggc aagagctcgc
     2641 ttgccttcga caccatctat gccgaaggcc agcgccgcta cgtcgaatcg ctctcggcct
     2701 acgcccggca gttcctgtcg atgatggaaa agccggacat cgacagcatc gaagggctgt
     2761 ccccggcgat ctcgatcgag cagaaatcca cctcgcacaa cccgcgctcg acggtcggca
     2821 cgatcaccga gatctacgac tacctgcgcc tgctctacgc ccgcgtcggc accccgcgct
     2881 gcccggatca cggcattccg ctcgaggcgc agacggtgag ccagatggtg gatgcgacgc
     2941 tggcgcagga tgcggccaag cgctacatgc tgctggcgcc ggtgatccgc gagcgcaagg
     3001 gcgagcacgt gcaggtgttc gagcagctgc gcgcgcaggg tttcgtgcgc gcccgcgtcg
     3061 acggcgtggt gtatgaactg gacgcggtgc cgccgctcgg cctgcgcatc aagcacacga
     3121 tcgaggcggt aatcgaccgc ttccgcccgc gcgaggacat caagcagcgc ctcgccgagt
     3181 cgttcgagac cgcgctgcgc ctcggcgacg ggctggcgat cgtcgccgat ctcgatgacc
     3241 ccgaggccag ggagcagctg tattcctcgc gctacgcctg cccggtgtgc gactactcgc
     3301 tgcccgagct cgagccgcgg ctgttttcgt tcaactcgcc gatcggcgcc tgccccacct
     3361 gcgacggcct cggcgtgacc caggtgttcg acccggcgcg cgtcgtggcc caccccgagc
     3421 tggcgctgtc cgctggcgcc gtgcgcggct gggatcggcg caacccgcat tatttccagc
     3481 tcatcctgtc gctggccgcg cattacggct tcgatgtcga caccccgtgg cgcgacctgc
     3541 ccaaggcgac gcgcgaggcg atcctgtacg gcagcggcaa ggacaagatc gcgttccgct
     3601 acctcaccga acgcggcggc aaggtgaccc gcgagcatgc gttcgagggc gtgctgccga
     3661 acctcgagcg gtgctacaag gaaaccgaat cgcccgcggt gcgcgacgag ctggccaagt
     3721 acatcagcga cacgccgtgc cgcgaatgcg gcggccagcg cctgaaccgc gccgcgcgca
     3781 acgtgttcgt cgccgatacc gcgctgccgg tgttgaccaa ccgttcaatc aacgatgcgc
     3841 tcgccttctt cggcacgctg cagctcaccg gctggcgcgg cgagatcgcg gcgaagatcg
     3901 tcaaggaaat ccgcgagcgc ctcaccttcc tgcgcgacgt cggcctggat tacctgacgc
     3961 tcgaccgcca ggccgattcg ctgtccggcg gcgaagcgca gcgcatccgc ctcgccagcc
     4021 agatcggcgc cggcctggtc ggcgtgatgt acgtgctcga cgagccgtcg atcggcctgc
     4081 accagcgcga caacgagcgc ctgctcggca cgctcacccg gctgcgcgac ctcggcaaca
     4141 cggtgatcgt ggtcgagcac gacgaggatg cgatccgcac cgccgactac gtgctcgaca
     4201 tcggccccgg cgccgggacg catggcggcg aggtcgtggc gcaaggcgcg gtgaaggacc
     4261 tggtcgccgt gccgcgctcg atcaccggcc agttcctgtc cggcgagcgt gtgatcgaag
     4321 tgccaaagcg gcgccgcgaa ccggcggccg atgcgtggct gcgcatccgg ggtgcgcacg
     4381 gcaacaacct gaagcacgtc gacctcgcgg ttccggccgg gctgttcacc tgcatcaccg
     4441 gcgtctccgg ctcgggcaag tccaccctga tcaacgacac gctctaccag ctcgccgcac
     4501 aggaattgaa cggcgccagc ggccagccgg cgccgttcga gtcggtggat ggcatgcagc
     4561 tgttcgacaa ggtggtcgcc atcgaccagt cgccgatcgg ccgcacgccg cgctcgaacc
     4621 ccgcgaccta caccggcctg ttcaccccgc tgcgcgagct gttcgcgcag gtgccggagg
     4681 cgcgtgcgcg cggctacgag gccgggcgct tcagcttcaa cgtgcgcggc ggtcgctgcg
     4741 aggcgtgcga gggcgacggc ctgatcaagg tggagatgca cttcctgccg gacgtctacg
     4801 tgccgtgcga cgcctgccac ggcaagcgct acaaccgcga aacgctggag gtgctgtaca
     4861 agggccacac catcgccgac gtgctcgaca tgacggtgga ggaagcgctg gcgctgttcg
     4921 agaacgtgcc gacgatcgcg cgcaagctcg acaccctgcg cgccgtcggc ctcgactaca
     4981 tcaagctcgg ccagagcgcg accacgctgt ccggcggcga ggcacagcgc gtcaagctgt
     5041 ccaaggagct gtcgcggcgc gacaccggcc acacgctgta catcctcgac gagcccacca
     5101 ctggcctgca tttccacgac atcgaccagc tgctcgacgt gctgcaccag ttggtggacc
     5161 agggcaacac ggtggtggtg atcgagcaca acctcgacgt catcaagacc gccgactgga
     5221 tcgtcgatct cggcccggaa ggcggcgacg gcggcggccg catcatcgcc cagggcacgc
     5281 cggaaaccgt cgccgccacg ccgggttcgt ataccggcca gttcctggcg ccgctgctgg
     5341 tcaaggcaca cccggcgcgc cggccgaaaa agaccaagac cacgctgaag cacgtcgctt
     5401 cgctcgacaa atacaagccg ctgcgcgcgc gcaggaaagc cccatgacca ccgccacgcc
     5461 cgacaccagc gccaaggctc ccacccgccg cggcaagcgc gctccgaccg cctccgtcgt
     5521 gccgcctgcg cccgccaccc tgttcaccgc gagcctggcg gtgcgctggc gcgacctcga
     5581 cgcgttcaac catgtcaaca actccaacta cctcaccttt ctcgaggaag cccacctgca
     5641 atggctgcag caggtgcgcg gcgaatggtt cggcgaaggc tcgatgccgg tgctggccag
     5701 cagcgaggtc aactaccgcc ggccgatcgc gtggccggcg cagctc
//
LOCUS       DASSVL010000412         2401 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_729845, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000412 DASSVL010000000
VERSION     DASSVL010000412.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2401)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2401)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2401
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_729845"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..289)
                     /locus_tag="VFM52_07220"
     CDS             complement(<1..289)
                     /locus_tag="VFM52_07220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008438118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal protein N'"
                     /protein_id="HET8764996.1"
                     /translation="MMPAVLRVALPVPLPTLFDYLPPIDGAAAVPGCRVLVPFGRGSA
                     VGVVVATGVTPSVATTKLKPAHKLLDRTPLLDAELMQTLAWAADYWLAAPGE"
     gene            712..2106
                     /locus_tag="VFM52_07225"
     CDS             712..2106
                     /locus_tag="VFM52_07225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015448858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0042910 - xenobiotic transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006855 - xenobiotic transmembrane
                     transport [Evidence IEA];
                     GO_process: GO:0009410 - response to xenobiotic stimulus
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MATE family efflux transporter"
                     /protein_id="HET8764997.1"
                     /translation="MKSLYPDRARVRRELGATVRLAIPLILAQLAAVGSNVVDAVLSG
                     HVSAHVLGAVAVGASVWSLAIVTGIGVMMAVPPSIAQLDGAGRRGEVGAVFRQALWLA
                     LAMGALLWFAVRHAGPLLDLIGVAPSLRHDVERFLLAISWGAPALTMYFALRGLSEGL
                     LLTRPSMYFGFGGLLVLVPLGYVLMFGKLGIPPQGAHGCGIATATVLWLEMAGFAIYV
                     GKHRNYRGLNLLARFEWPAWRRIRALLHIGAPMAVTLLAEAGLFVAATLIISTLGEDA
                     VASHQVAINVASLFFMIPLGLAMAITVRVGNAVGRGDAQGVRYAGFCGIGLGLATQFV
                     SSALMLGIPHFIAALYTHDAKVIALAAQLIVLAGVFQFSDGIQVAANGALRGLKDTRV
                     PMAITLFAYWGVGMPIGWALGFRDDLGARGVWMGLIAGLTVAAAMLFVRFWRSARGER
                     WRRSADTTTVPVGA"
     gene            2161..>2401
                     /locus_tag="VFM52_07230"
     CDS             2161..>2401
                     /locus_tag="VFM52_07230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017463708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptide peptidase SppA"
                     /protein_id="HET8764998.1"
                     /translation="MPVPPLPPRSSSPYALPRRRGFWPVLRGIGRGLNLLRLAIINVV
                     FFTFLLVLLLLIAGGIAGSGENQRIAANSVLVLKPE"
BASE COUNT          307 a          797 c          870 g          427 t
ORIGIN      
        1 cctcgccggg cgcggccagc cagtagtctg cggcccaggc gagggtctgc atcagctcgg
       61 cgtcgagcag cggcgtccgg tccagcagct tgtgcgcggg cttcagcttg gtggtcgcca
      121 cgctgggcgt caccccggtg gcgaccacca cgccgaccgc gctgccacgc ccgaacggca
      181 ccagcacgcg gcagccaggc acggcggcgg cgccgtcgat cggcggcagg taatcgaaca
      241 gggtgggcaa cggcaccggc agtgcgacgc gcaggacggc gggcatcatg cggccagtgt
      301 agcggccgcc ggtaccgcct ccgggatacc cgcggccggc ggcagcgtac ttgcagccca
      361 ttgttgccgg aaggtcgagg aagcagccgc aagtggcgcc gtggcgcagg tttttccgct
      421 tatccacaga gactgtggac aagtctgtgg atgacgcgtt gaagagggca tcccaagcgc
      481 gtgccatcgc gcttcccgac acgttgctca gcttttggtc atccgaaaaa cacctttgga
      541 aacaaggaaa tataaagcca cacctggaac tgcatcacac tcccgtcgcc ggcaacgtcg
      601 cgcggcttga cagcttgggg ccgctgtgca aaacgctgca gtgcaacgta cggcgggtgg
      661 gtcgcagccg ggcttccact agaatggcga cctgccggag ttcccgtccc catgaagtcg
      721 ctgtatcccg atcgcgcccg cgtgcggcgc gagctcggcg ccaccgtgcg cctcgcgatt
      781 ccgctcatcc ttgcccagtt ggccgccgtc ggcagcaacg tcgtcgacgc ggtgttgtcc
      841 ggccacgtca gcgcccatgt gctcggcgcg gtggcggttg gcgccagtgt gtggtcgctg
      901 gcgatcgtga ccggcatcgg ggtgatgatg gcggtgccgc cgtccatcgc ccagctggat
      961 ggtgccgggc ggcgcggcga ggtcggggcg gtgttccgcc aggcgctgtg gctggcgctg
     1021 gcgatgggcg cgctgctgtg gttcgcggtg cgccatgccg gaccgctgct ggacctgatc
     1081 ggcgtcgcgc cgagcctgcg ccacgacgtc gagcggttcc tcctggcgat cagctggggc
     1141 gcgccggcgc tgacgatgta cttcgcgctg cgcggcttgt ccgagggcct gttgcttacc
     1201 cgcccgtcga tgtatttcgg cttcggtggc ctgctggtgc tggtgccgct cggctatgtg
     1261 ttgatgttcg gcaagctcgg catcccgccg cagggcgcgc acggctgcgg catcgccacc
     1321 gcgaccgtgc tgtggctgga gatggccggc tttgcgatct acgtcggcaa gcaccgcaac
     1381 tatcgcgggc tgaacctgtt ggcacgtttc gagtggccgg cctggcggcg catccgcgcg
     1441 ctgctccata tcggtgcgcc gatggcggtg acgctgctgg ccgaagccgg gctgttcgtc
     1501 gccgcgacgc ttatcatcag cacgctgggc gaggatgcgg tggccagcca ccaggtggcg
     1561 atcaacgtcg cctcgctgtt tttcatgatc ccgctgggcc tggcgatggc gatcaccgtg
     1621 cgcgtcggca acgcggtcgg gcgcggcgat gcgcaaggcg tgcgttatgc cgggttctgc
     1681 ggcatcgggc tcgggctggc gacgcagttc gtctcctcgg cgctgatgct cggcatcccg
     1741 cacttcatcg ccgcgctgta cacccacgat gcgaaggtga tcgcgctggc ggcgcagctg
     1801 atcgtgctgg ccggggtgtt ccagttctcg gatggcatcc aggtcgccgc gaacggcgca
     1861 ctgcgcgggc tgaaggacac ccgcgtgccg atggcgatca cgctgtttgc gtactggggc
     1921 gtcggcatgc cgatcggctg ggcgctgggc ttccgcgacg acctcggcgc gcgcggcgtg
     1981 tggatggggc tgatcgccgg gctgacggtg gccgcggcga tgctgttcgt gcggttctgg
     2041 cgcagcgcgc ggggcgagcg ttggcgccgg tcggcggata ccacgacggt gccggtaggc
     2101 gcctgacgca cggcggcgcg agccggtacg ctagcgcggt tcccatcgga ttccgcccgc
     2161 atgcccgtgc cacccctgcc gccgcgttcc tcctcgccgt atgcactgcc gcgccgccgc
     2221 ggtttctggc ccgtgctgcg cggcatcggc cgcggcttga acttgctgcg gctcgccatc
     2281 atcaacgtgg tgttcttcac cttcctgctg gtgttgctgt tgctgatcgc cggcggcatc
     2341 gccggcagcg gcgaaaacca gcgcatcgcc gccaacagcg tgctggtgct gaagcccgag
     2401 g
//
LOCUS       DASSVL010000413         4952 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1280857,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000413 DASSVL010000000
VERSION     DASSVL010000413.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 4952)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4952)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4952
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1280857"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..482
                     /gene="msrA"
                     /locus_tag="VFM52_07235"
     CDS             <1..482
                     /gene="msrA"
                     /locus_tag="VFM52_07235"
                     /EC_number="1.8.4.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019182415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008113 - peptide-methionine (S)-S-oxide
                     reductase activity [Evidence IEA];
                     GO_function: GO:0033744 -
                     L-methionine:thioredoxin-disulfide S-oxidoreductase
                     activity [Evidence IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="peptide-methionine (S)-S-oxide reductase MsrA"
                     /protein_id="HET8764999.1"
                     /translation="RKFWETEGVVSTAVGYEGGFTPNPTYEEVCSGRTGHSEAVRVVY
                     DPSRVTYRDLLKVFWEDHDPTQGMRQGNDVGTQYRSLILAADAAQLAAAEASALRYQH
                     ALAHAGFGAITTQIVPAAPFYYAEDAHQQYLAKNPHGYCGLGATGVACPAGVLAGAP"
     gene            complement(514..1488)
                     /locus_tag="VFM52_07240"
     CDS             complement(514..1488)
                     /locus_tag="VFM52_07240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007080147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /protein_id="HET8765000.1"
                     /translation="MNLRDLHYLVALAEQRHFGRAAEACFVSQPTLSTQIKKLEEELG
                     VTLVERTPRKVLLTDVGREIVARARDVLNEVEQIKGVARRTLDPESGTVRLGIFPTLG
                     PYLLPHAVPLIRARFPRLELLLVEEKTEEVLRRLREGRLDAVIVALPVHDESLHVELL
                     FEEPFVLAAPLSHPLARKAALKLVDLASQSLLLLEDGHCLRDQALEVCHLAGAGERTG
                     FRATSLETLRQMVAAEVGITLLPTLAVKPPVAQAPNLRLVPFVGKHPPNRRIAMLWRK
                     SSAMHGFLVQLADVIRTLPTALFDPHDVIAAQPPMPLPAKSTRVPARA"
     gene            1618..4296
                     /locus_tag="VFM52_07245"
     CDS             1618..4296
                     /locus_tag="VFM52_07245"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019466343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004177 - aminopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M1 family metallopeptidase"
                     /protein_id="HET8765001.1"
                     /translation="MRRSIRPLLLTALAAGCSLAFAAQADSAPQGRLPAWAVPQAYQI
                     AFKVDPAQQDFSGTTTIKVKLTQAADHVWLDGAALKVSKVTVTDAAGKTHEAKYVDAD
                     PKAGVVRVDFGSTLKAGDIVLKFVYTAPLNAQLQGLYKVTAKGQPYAMTQMEPISARY
                     AFPSFDEPGFKTPFDISITLPADQSAFANTRQVSEQPAGKGWKTVTFAPTLPLPTYLV
                     AFAVGPWSVKEAPDIAPDAYRTKPLPLRGIAAAGEAQRMGHVLGETPSIIHALESYYG
                     FGYPFGKLDLLAAPDFSAGAMENAGLVTFRDWLLLLDKDSPANNVRGSFNVTAHELAH
                     QWTGDTVTLAWWNDIWLNEAFATWMQQKVTMEVHPEYRADLDRVRGAQGAMANDSLVS
                     ARAIRQPITGNGDIETAFDGITYQKGAAVIGMFENYVGDKVFQKGMRAYIQAHKFGNA
                     NADDLVNAIATAAGKGDDFKHAFDSFLNQTGVPYVQTRLTWKDGKAVLDLAQSRYLPL
                     RTHGDASRIWGVPVCVRYGTATGSKVACDMLSQATGSMVLPDAAKATWVMPNANAAGY
                     YRFSLDKAELAALVRAVPKLSDPEQLAYNDAIGASFQHGDLDAAQVLAALKPLTASKT
                     RQVATAPLNRVEWIYRHVAKTDAERAKVAAWVKAAYLPKLEALGYQRKAGESEDASLL
                     RSTLAGSLAFDYQLPEVRAALLKQGEAALKTGADGKLDLAAANPDLLGDALGVAVQTQ
                     GKRAVDALIAALPGTSDPAQRNGILGGLAHVEDPALLDEVRDFALGKSVKVGEMAMLL
                     RGGRDTAAQRDAMWTWFTGHYPQILKRTGSFAGGRLPMLAAGGGCSTPEAQRAQTFFQ
                     AHMNDAAGIARGLAQTTESIELCAALKDKQAAVGLK"
     gene            4461..>4952
                     /locus_tag="VFM52_07250"
     CDS             4461..>4952
                     /locus_tag="VFM52_07250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007808443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8765002.1"
                     /translation="MVDLEIQALALAREGLLLETGRLAGTCGFTLVRQRLVPDPHGAL
                     LSMVVRGSWFKKRALKAALDGCDRYVSVTLLPAVADFHPHFGATRHVTAGYVPPPVPG
                     PAPTATKPSTASSAPVAATAAAIVVPARAPAPAPETKTRAALATRPPARATAGTIVWE
                     DAQL"
BASE COUNT          783 a         1709 c         1760 g          700 t
ORIGIN      
        1 agcgcaagtt ctgggagacc gagggcgtgg tgtccacagc ggtcggctac gagggagggt
       61 tcacgcccaa cccgacgtac gaggaggtct gctctggccg aacgggccac tccgaggcgg
      121 tgcgcgtcgt ctacgacccg agccgggtga cgtaccgcga cctgctcaag gtgttctggg
      181 aggaccacga cccgacccag ggcatgcgcc agggcaacga cgtcggtacc cagtaccgct
      241 cgctgatcct ggcggccgac gccgcgcaac tggccgccgc ggaggcctcg gcactgcgct
      301 atcagcacgc cctggcgcac gcgggattcg gcgccatcac cacgcagatc gtgccggccg
      361 cgccgttcta ttacgccgag gacgcgcacc agcaatacct ggcgaagaac ccgcacggct
      421 actgtgggct gggcgccacc ggcgtggcgt gcccggcggg tgtgttggcc ggcgcgccgt
      481 aaggcggtac gcgggcgatg cgcccgccgc ggttcacgcg cgggcgggta cgcgggtgga
      541 tttcgccggc agcggcatcg gcggttgcgc ggcgatgacg tcgtgcgggt cgaacagcgc
      601 cgtcggcagt gtgcggatca catcggcgag ttggaccagg aagccgtgca tggccgagct
      661 cttgcgccac agcatggcga tgcgccggtt cggcgggtgc ttgccgacga acggcaccag
      721 gcgcaggttc ggcgcctgcg ccaccggcgg cttcactgcg agcgtcggca gcagcgtgat
      781 gccgacttcg gcggccacca tctggcgcag cgtttccagg ctggtggcgc gaaagccggt
      841 gcgttcgccg gcaccggcca ggtggcagac ctccagcgcc tggtcgcgca ggcagtgacc
      901 gtcttcgagc agcagcaggc tctggctcgc gaggtcgacg agcttcagtg cggccttgcg
      961 cgcgagcggg tgcgacagcg gcgcggccag cacgaacggt tcttcgaaca gaagttccac
     1021 gtgcaggctt tcgtcgtgca ccggcaacgc gacgatcacg gcgtccagcc ggccttcgcg
     1081 caggcggcgc agcacctcct cggtcttttc ctcgaccagc agcagttcca ggcgcgggaa
     1141 gcgcgcgcgg atcagcggca ccgcgtgcgg caggagatag ggaccgagcg tgggaaagat
     1201 gcccagccgc accgtgcccg attcggggtc gagcgtgcgc cgcgccactc ccttgatctg
     1261 ctccacctcg ttcagcacgt cgcgcgcgcg ggcgacgatc tcgcggccga cgtcggtcag
     1321 cagcaccttg cgtggcgtgc gctcgaccag cgtcacgcca agttcttcct cgagcttctt
     1381 gatctgggtg gacaacgtgg gctggctgac gaagcacgcc tccgccgcgc ggccgaaatg
     1441 gcgctgttcg gccagcgcca cgaggtagtg caggtcgcgc aggttcatga atgcgttgcg
     1501 tccggtcgat tgacgcggtc gatcatagcc gcaccgcgca ggcatgcctt gtggcactgg
     1561 ggagcggagc ggcttcggcc tagcgtcgca gcttgtcctt ctctgccggg agctgccatg
     1621 cgtcgttcca tccgcccctt gttgctgacc gcgctcgcgg ccggttgcag ccttgccttt
     1681 gccgcgcagg ccgacagcgc gccgcagggc cgcctgccgg cctgggcggt gccgcaggcg
     1741 taccagatcg cgttcaaggt ggacccggca cagcaggatt tctccggcac caccacgatc
     1801 aaggtgaagc tcacccaggc cgccgaccac gtgtggctgg acggcgccgc actgaaggtg
     1861 tcgaaggtga cggtgaccga tgccgcgggc aagacgcacg aggcgaagta cgtggacgcc
     1921 gaccccaagg ccggcgtggt gcgcgtggat ttcggcagca cgctgaaggc cggcgacatc
     1981 gtgctgaagt tcgtctacac cgcgccgctc aacgcgcagc tgcaggggct gtacaaggtc
     2041 accgcgaagg gccagccgta cgcgatgacg cagatggagc cgatcagcgc gcgctatgcg
     2101 ttcccgagct tcgacgagcc ggggttcaag acgccgttcg acatctcgat cacgctgccg
     2161 gcggaccaga gcgcgttcgc gaacaccagg caggtgagcg agcagccggc cggcaagggc
     2221 tggaagacgg tgaccttcgc gccgacgctg ccgctgccga cctatctcgt cgcgttcgcg
     2281 gtcggcccgt ggagcgtcaa ggaggcgccg gacatcgcgc cggacgccta ccgcaccaag
     2341 ccgctgccgc tgcgcggcat cgccgccgcc ggcgaggcgc agcgcatggg ccacgtgctc
     2401 ggcgagacgc cgagcatcat ccacgcgctg gagagctact acggtttcgg ctacccgttc
     2461 ggcaagctcg acctgctcgc cgcaccggat ttctccgctg gcgcgatgga gaacgccggc
     2521 ctggtcacct tccgcgactg gctgctgctg ctcgacaagg attccccggc caacaacgtg
     2581 cgcggctcgt tcaacgtcac cgcgcatgag ctggcgcacc agtggaccgg cgacaccgtg
     2641 acgctggcct ggtggaacga catctggctg aacgaggcgt tcgccacctg gatgcagcag
     2701 aaggtgacga tggaagtgca cccggaatac cgcgccgatc tcgaccgcgt gcgcggtgcg
     2761 cagggcgcga tggcgaacga cagcctggtc agcgcgcgcg cgattcgcca gccgatcacc
     2821 ggcaacggcg acatcgagac cgcgttcgac ggcatcacct accagaaggg cgccgccgtc
     2881 atcggcatgt tcgagaatta cgtgggcgac aaggtgttcc agaagggcat gcgcgcatac
     2941 atccaggcgc acaagttcgg caacgccaac gccgatgacc tggtgaacgc gatcgccacc
     3001 gccgccggca agggcgacga tttcaagcac gctttcgaca gtttcctcaa ccagaccggc
     3061 gtgccgtacg tgcagaccag gctcacgtgg aaggacggca aggcggtgct cgacctcgcg
     3121 caaagccgct acctgccgct ccgcacccac ggcgacgcgt cgcgcatctg gggcgttccg
     3181 gtgtgcgtgc gctacggcac cgcgaccggc agcaaggtgg cgtgcgacat gctgagccag
     3241 gccaccggct cgatggtgct gccggatgcg gcgaaggcga cgtgggtgat gccgaatgcg
     3301 aacgccgccg gctattaccg cttcagcctg gacaaggccg agctggccgc gctggttcgc
     3361 gcagtgccga agctcagcga ccccgagcag ctcgcgtaca acgacgcgat cggcgcgagc
     3421 ttccagcacg gcgacctgga tgccgcgcag gtgctcgccg cgctcaagcc gctcaccgcg
     3481 tcgaagacgc gccaggtggc caccgcgccg ctcaaccggg tcgagtggat ctatcgccac
     3541 gtcgcgaaga ccgacgccga gcgcgccaag gtggcggcgt gggtgaaggc cgcctacctg
     3601 cccaagctcg aagcgctcgg ctaccagcgc aaggccggcg agtcggaaga cgcctcgctg
     3661 ctgcgcagca cgctcgccgg ctcgctggcg ttcgactacc agctgccgga ggtgcgcgcg
     3721 gccttgctca agcagggtga ggcggcgctc aagaccggcg ccgacggcaa gctcgatctc
     3781 gccgccgcca accccgacct gctcggcgac gcgctcggcg tggcggtgca gacgcagggc
     3841 aagcgcgcag tggatgcgct gatcgccgcg ctgccgggca ccagcgatcc ggcacagcgc
     3901 aacggcatcc tcggcggcct cgcgcacgtc gaggacccgg cgctgctcga cgaggtgcgt
     3961 gacttcgcgc tcggcaagtc ggtcaaggtc ggcgagatgg cgatgctgct gcgcggtggc
     4021 cgcgacaccg cggcgcagcg cgacgcgatg tggacgtggt tcaccggcca ctacccgcag
     4081 atcctcaagc gcaccggcag cttcgccggt ggccgcctgc cgatgctcgc ggcgggcggc
     4141 ggctgctcca cgccggaagc gcagcgcgcg cagaccttct tccaggcgca catgaacgac
     4201 gccgccggca ttgcgcgcgg gctggcgcaa accacggagt cgatcgagct gtgcgccgcg
     4261 ctgaaggaca agcaggcggc ggttggcctc aagtaggcca agcaggcggt ttgcccgaga
     4321 gctgggcagc aagggcacgc gagcgatcgc gtgcccttgc gcgtcgtggc gccgcgcgct
     4381 gcaccgcggt gcatgccggc cgatacaatc caggtcatgc gacgtcccgc tgcgcgggcc
     4441 gccagcccac agggggcgac atggttgatc tggaaatcca ggccctcgcg ctggcgcgcg
     4501 agggtttgct gctggagacc gggcgtcttg ccggcacctg cgggttcacg ctggtgcgcc
     4561 agcggttggt gcccgacccg catggcgcgc tgctgtcgat ggtcgtgcgc ggttcgtggt
     4621 tcaagaagcg cgcattgaag gcggcgctgg acggctgcga ccgctacgtc agcgtgacgc
     4681 tgctgccggc ggtggccgat ttccacccgc acttcggcgc cacgcgccac gtcacggccg
     4741 gctacgtccc gccgccggtg cccgggccgg caccgacggc aaccaaacca tcgacggcat
     4801 cgtccgctcc ggtggcggcc acggctgccg cgatcgttgt tccggcccgc gcacccgcgc
     4861 ccgcgccgga aacgaaaacc cgggcagcgc tggccacgcg gccgccggcg cgcgcgacgg
     4921 ccggcacgat cgtatgggag gacgcgcagc tg
//
LOCUS       DASSVL010000414         8210 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_503695, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000414 DASSVL010000000
VERSION     DASSVL010000414.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 8210)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8210)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8210
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_503695"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..414)
                     /locus_tag="VFM52_07255"
     CDS             complement(<1..414)
                     /locus_tag="VFM52_07255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007514073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional proline dehydrogenase/L-glutamate
                     gamma-semialdehyde dehydrogenase"
                     /protein_id="HET8765003.1"
                     /translation="MPQVPIVISPILSPELPAGAEPARARITAAWLRDETEAVNDLLA
                     QASFPPAEREAVIDVAAGLVTRVRARAKDQSAVESFMRQYDLSSEEGVLLMCVAEALL
                     RIPDKATADKLIRDKLGDADWKKHLGQSESLFVNAS"
     gene            593..1090
                     /locus_tag="VFM52_07260"
     CDS             593..1090
                     /locus_tag="VFM52_07260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015446557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2244 domain-containing protein"
                     /protein_id="HET8765004.1"
                     /translation="MIVLRPAVADPSGVTIWLLPNRTLSRRGMHRLIVALVVLALATS
                     VWGGWQGNVFAPLFAAFESGAMAIALAVAWRAGDRSERIMLGAAALEVRSSPGSRQVC
                     FQPYWVRARLEDGDNGHRRLLLASHGRELEIGTFLAEPERIALWRKLKVLLGGNHDQP
                     RGWFN"
     gene            1179..2060
                     /gene="coxB"
                     /locus_tag="VFM52_07265"
     CDS             1179..2060
                     /gene="coxB"
                     /locus_tag="VFM52_07265"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017463550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase subunit II"
                     /protein_id="HET8765005.1"
                     /translation="MVAAGGVWLALVAGVAQANPHPWQLNMKPGVTTWSGEAYFLNQV
                     GLWVCTVIGVLVFGAMFIAMFRFRKSRGAVAEKWAHNTTIEVVWTTIPVIILATLAWM
                     STGGLVTFADTTGSQMTVKVTGYQWKWRYDYVDYQGKAIQNVGFMSKLDAQSDKTRQL
                     HSGMDPYAVQVDGEHTYLLNVDQPLVLPTNTKIRFVITADDVIHSWWVPDFGWKMDAI
                     PGIVNTAWANIVKPGVYRGQCAELCGQDHGFMPIVVKAVSPADFEKWLATREKAAPAT
                     AAAPLATPVATLAAAGR"
     gene            2133..3749
                     /gene="ctaD"
                     /locus_tag="VFM52_07270"
     CDS             2133..3749
                     /gene="ctaD"
                     /locus_tag="VFM52_07270"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007081654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase subunit I"
                     /protein_id="HET8765006.1"
                     /translation="MATATTHDLHEEHHGAPKSFVQRWLMSTNHKDIGTLYLVFSLTM
                     FFIGGSFAMLIRAELFKPGLELVQPYTFNELTTMHGLTMIFGAIMPAFVGLGNWMIPL
                     MIGAPDMALPRMNNLSFWILPFAFLLLYSTLLLPGGGPAGGWTMYPPLSLQSGSLAYA
                     VFAIHLMGISSVMGAINIIATILNMRAPGMDLIKMPVFVWSWLITAFLLIAVIPVLAG
                     AVTMLLTDKYFGTSFFNPHGGGDPVLYQHVFWFFGHPEVYIMILPAFGIISEIIPTFA
                     RKPIFGYKAMVLAIACIAFLSFLVWAHHMFAVGMPVGADIFFMYATMLIAVPTGIKVF
                     NWVATMWGGSLTFETPMLFAIAFVVLFSIGGFSGLMLALVPADFQYHDTYFVVAHFHY
                     VLVTGAVLALIAAVYYWWPKWTGRMYNEFWGKVHFWCSLVFVNVLFFPQHFLGLAGMP
                     RRIPDYNVAFAGFNMVSSIGGFLFGASQLIFLGVIIHCVFFSKQKAGNRAWEGAKGLE
                     WTVPSPAPYHTFEVPPVVHDEELAHSGADD"
     gene            3742..3933
                     /locus_tag="VFM52_07275"
     CDS             3742..3933
                     /locus_tag="VFM52_07275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007514063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8765007.1"
                     /translation="MIDVAVMTGAEPQQGQVRDGTAAVARTPLGRVQRRGVRRTVTVL
                     AVVIGIFYLLSFVQILLMK"
     gene            3994..4881
                     /locus_tag="VFM52_07280"
     CDS             3994..4881
                     /locus_tag="VFM52_07280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007514061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase subunit 3"
                     /protein_id="HET8765008.1"
                     /translation="MVQQQDVYFVPSRSQWPIVAALVLFLTVFGAAHWLNAEPGEAAF
                     GKTVITIGALGILGMFFGWFGSVIRESIAGRYNSQVDTSFRMGMMWFIFSEVFFFGAF
                     FGSLFYVRMFSLPWLAGSGHGVLTHQFLYDTYSGTWGADGGNGPMAIGGAFSTVVPWG
                     LPLLNTLILLTSSVTVTIAHHALRGGHRARVLVFLGLTVLLGATFVMFQAHEYAEAYH
                     ELNLTFQTGVYGSLFYMLTGFHGFHVTIGTIMLAVIWLRVLKGHFSPEHHFGFEAVAW
                     YWHFVDVVWLCLFLFVYVL"
     gene            complement(4949..5164)
                     /locus_tag="VFM52_07285"
     CDS             complement(4949..5164)
                     /locus_tag="VFM52_07285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007514059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin transmembrane helix small protein"
                     /protein_id="HET8765009.1"
                     /translation="MGSIFKIIVVVLLLVVIFSLAQALYYMMTDKGNDDRVVWALTRR
                     IALSVVVIGIVVFGIWMGWLHPHDVGQ"
     gene            5221..5985
                     /locus_tag="VFM52_07290"
     CDS             5221..5985
                     /locus_tag="VFM52_07290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007514057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SURF1 family protein"
                     /protein_id="HET8765010.1"
                     /translation="MLGGLRRPPWWAIALTLAAAALFVRLGIWQLHRADFKDDLLQRY
                     AAAATAAPQSFASVALAPPADAFPRVDVHGEYVADRIYLLDNPKHDDLGGVEVFVPLR
                     LAGSSRLLLVDLGFLPGNGTDQTPQLPPLPTGVQHLHGLYLPPPPRGFEMGGNALARQ
                     TTWPKKSIYLDPAQVSADLGAPLYPRVLSLDADPASIYVRVHTLDFGDMPPARHRAYA
                     FQWFSFAVAVIVILIVVNRDKRRKRRRPPTDHVDDP"
     gene            5982..6551
                     /locus_tag="VFM52_07295"
     CDS             5982..6551
                     /locus_tag="VFM52_07295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017463544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8765011.1"
                     /translation="MTDPAASALRNGRVKLLLVAAVFLVPFLVALALTLAGWQPGVKG
                     NGLPILPQRNFAQEQLPIRMANGGDWAWRDVKPRLTLIALPGPDCATRCYAALTALAK
                     ARVMLNQNQDRLRLLYVGTPPGGEEGKGMANYWRVGTDVDDRLGAWRPQAADSLGAVL
                     VESDGTALASYPAGFDPAGVLRDLRKVIR"
     gene            6548..7714
                     /locus_tag="VFM52_07300"
     CDS             6548..7714
                     /locus_tag="VFM52_07300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007806728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="COX15/CtaA family protein"
                     /protein_id="HET8765012.1"
                     /translation="MSRGGASRGLRWLSLLAAVFALGLVMFGAFVRLSDAGLSCPDWP
                     TCYGEATWPQHAQAVAQADAAFPQRPYVAHKAWREQVHRMLAGTLGVIVLVMAAMAAW
                     RQRRLLWLVGGSALFAAVGVTLYMRGEHVVSSVLAAAAIALPLVAAGLLRAPAALRVC
                     LVALGVIVFQAMLGMWTVTLLLKPIVVTGHLLGGMTTLALLGYAALRFVGAGADDDAL
                     RGLRHAVVLGIVLLAGQIALGGWTSSNYAALACGFGSAAFPHCLGQWWPAADFHQGFI
                     LWRGIGVDYEGGVLDGTARTAIQLVHGLGALVVACYLAWLAWRLARRGLHAWGGAIAV
                     ALACQVLLGISNVYFGLPLAVATAHNGMAALLLLTLVATLARTQRRALLQGATA"
     gene            7711..>8210
                     /locus_tag="VFM52_07305"
     CDS             7711..>8210
                     /locus_tag="VFM52_07305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008213403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016765 - transferase activity,
                     transferring alkyl or aryl (other than methyl) groups
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UbiA family prenyltransferase"
                     /protein_id="HET8765013.1"
                     /translation="MTGVMGEYFQLTKPRIVALLVFCAVIGMFLAVPGLPRWQALIFG
                     TLGIWLASSSAAAFNQLIDQRIDKVMVRTSHRPLPAGQLKPRQAFAFAVTLGIVSMIV
                     LALWVNVLTAVLTFVGLIGYAVIYTAVLKRASPQNIVIGGLAGAIPPVIGWTAVTGSL
                     HPYALQL"
BASE COUNT         1159 a         2655 c         2867 g         1529 t
ORIGIN      
        1 gctggcattg acgaacagcg actcgctctg gcccaggtgc ttcttccagt cggcatcgcc
       61 gagcttgtcg cggatcagct tgtcggcagt ggccttgtcg ggaatgcgca gcagtgcctc
      121 ggcgacgcac atcagcagta cgccttcctc ggaagacagg tcgtactggc gcatgaagga
      181 ttcgaccgcg ctctggtcct tggcgcgggc gcgcacgcgg gtcacgaggc cggcggcgac
      241 atcgatcacc gcttcgcgct cggccggtgg aaagctggcc tgggccagga ggtcgttgac
      301 cgcttcggtc tcgtcgcgca gccacgcggc ggtgatgcgc gcgcgggccg gctcggcgcc
      361 ggcggggagt tcggggctga ggatgggcga aatcacgatg ggaacttgtg gcatgaaggg
      421 gagtgaagca gcgcgattgt acgctgcacg ccgtgcgggt gcggccgtat cgccgagccg
      481 tcgtgcgccc ctgccacggg gtggccatga tttgcctcaa gcacctgcga caatcttgcc
      541 cattgcattt tcacgaccta tcatcgaccc gctttcggta cgcggtgccc ccatgatcgt
      601 gcttcgacca gcagtcgccg atccgtccgg cgtgacgata tggcttttgc ccaatcgcac
      661 gctcagtcgg cgcggcatgc atcggctcat cgtggcgctc gtggtgttgg cgctggcgac
      721 cagcgtgtgg ggcggatggc agggcaacgt gtttgccccg ctgttcgccg cgttcgaatc
      781 cggagccatg gccatcgcgc ttgcggtggc gtggcgggcc ggcgaccgca gcgaacgaat
      841 catgctcggg gcggcggcgc tggaggttcg ttcgtcgccg ggatcgcggc aggtgtgttt
      901 ccagccgtac tgggtacggg cgcggttgga ggacggggac aacggacatc ggcgcctgct
      961 gctggcatcg cacgggcgtg agttggaaat cggcacgttc ctcgccgaac cggaacgtat
     1021 cgcgctgtgg cggaaactca aggtgttgct gggcgggaac cacgaccagc cacgcggttg
     1081 gttcaactag gggcgaaagc atggcatctg gcaggatcgg aacgggcagc accgcgcgca
     1141 accgcgccca cgcagcccgg tcgcggctga aacgcgtgat ggtcgccgcg ggcggcgtgt
     1201 ggctggcgct ggtggccggc gtggcacagg ccaacccgca cccgtggcaa ctcaacatga
     1261 agcccggcgt caccacctgg tcgggtgagg cgtatttcct caaccaagtc ggcctgtggg
     1321 tatgcacggt gatcggcgtg ctggtgttcg gcgcgatgtt catcgcgatg ttccgcttcc
     1381 gcaaatcgcg tggcgcggtg gccgagaagt gggcgcacaa caccacgatc gaagtggtgt
     1441 ggacgacgat cccggtcatc atcctcgcta cgctggcgtg gatgtcgacc ggcgggctgg
     1501 tcacgtttgc cgacaccacc ggctcgcaga tgacggtcaa ggtcaccggc taccagtgga
     1561 agtggcgcta cgactacgtc gactaccagg gcaaggcgat ccagaacgtc ggcttcatgt
     1621 ccaagctcga cgcgcagtcg gacaagacgc ggcagctgca ttcgggcatg gacccgtacg
     1681 cggtgcaggt ggatggcgag cacacctacc tgctcaacgt cgaccagccg ctggtgctgc
     1741 cgaccaacac caagatccgc ttcgtcatca ccgccgacga cgtcatccac tcgtggtggg
     1801 ttcccgattt cggctggaag atggacgcca tccccggcat cgtcaatacg gcctgggcca
     1861 acatcgtgaa gcccggcgtc taccgtggcc agtgtgccga gctgtgtggc caggaccacg
     1921 gcttcatgcc gatcgtggtc aaggcggtat ccccggccga cttcgagaaa tggctggcaa
     1981 cccgggaaaa ggccgcgccg gcgacggctg cggcgccgct cgcgacgccg gtggcgacgc
     2041 tggcagcggc gggccggtaa gcgccccggg aatccttgaa tgcagcccgc gcggctgcgc
     2101 aatcgaaaga cttgagtcag aggtgcaagg ccatggccac cgcaaccacg cacgatctcc
     2161 atgaagaaca ccacggcgcg ccgaagagtt tcgtgcagcg ctggttgatg tccaccaacc
     2221 acaaggacat cggcacgctg tacctggtct tctcgctgac gatgttcttc atcggcggca
     2281 gcttcgcgat gctgatccgc gccgagctgt tcaagcccgg gctggagctg gtgcagccgt
     2341 acacgttcaa cgagctgacc acgatgcacg ggctcaccat gatcttcggc gcgatcatgc
     2401 cggcgttcgt ggggctcggg aactggatga tcccgctgat gatcggcgcg ccggacatgg
     2461 cgctgccgcg catgaacaac ctgtcgttct ggatcctgcc gttcgccttc ctgctgctgt
     2521 actccacgct gctgcttccc ggcggcggcc cggccggcgg ctggacgatg tacccgccgc
     2581 tgtcgctgca gtcgggttcg ctggcgtatg cggtgttcgc tattcacctg atgggcatca
     2641 gctcggtgat gggcgcgatc aacatcatcg ccaccatcct caacatgcgt gcgcccggca
     2701 tggacctgat caagatgccg gtgttcgtgt ggagctggct gatcacggcg ttcctgctga
     2761 tcgcggtgat cccggtgctg gccggcgcgg tgaccatgct gctgaccgac aagtacttcg
     2821 gcaccagctt cttcaacccg cacggcggcg gcgacccggt gctgtaccag cacgtgttct
     2881 ggttcttcgg gcaccccgag gtctacatca tgatcctgcc ggcattcggg atcatctcgg
     2941 agatcatccc gaccttcgcg cgcaagccga tcttcggcta caaggcgatg gtgctggcga
     3001 tcgcgtgcat cgcgttcctg tccttcctgg tgtgggcgca ccacatgttc gcggtcggca
     3061 tgccggtggg cgcggacatc ttcttcatgt acgccaccat gctcatcgcg gtgccgaccg
     3121 gcatcaaggt gttcaactgg gtggcgacga tgtggggcgg gtcgctcacg ttcgagacgc
     3181 cgatgctgtt cgcgatcgcg ttcgtggtgc tgttctcgat cggcggtttc tccggcctga
     3241 tgctggcgct ggtgccggcc gacttccagt accacgacac ctacttcgtg gtggcgcact
     3301 tccactacgt gctggttacc ggcgcggtac tggcgctgat cgccgcggtc tactactggt
     3361 ggccgaagtg gaccggacgc atgtacaacg agttctgggg caaggtgcac ttctggtgca
     3421 gcctggtgtt cgtcaacgtg ctgttcttcc cgcagcactt cctcggcctg gccggcatgc
     3481 cgcgccgcat cccggactac aacgtggcgt ttgccggctt caacatggta agctcgatcg
     3541 gcggattcct gttcggcgcc tcgcagctga tcttcctcgg cgtcatcatc cactgcgtgt
     3601 tcttctccaa gcagaaggcg ggcaatcgcg cctgggaagg cgcgaagggg ctggagtgga
     3661 cggtgccgtc gccggcgccc taccacacct tcgaggtgcc gccggtggtg cacgacgagg
     3721 agctggcaca cagtggcgcc gatgattgac gttgccgtga tgaccggcgc cgagccgcag
     3781 cagggtcagg tgcgcgacgg caccgctgcc gtcgcgcgca caccgctcgg ccgcgtgcag
     3841 cggcgcggcg tgcggcgcac ggtgacggtg ctggcggtgg tgatcggcat cttctacctg
     3901 ctgtcgttcg tgcaaatcct tttgatgaag tagcggcgca gcggcacggc gtgccgtgcc
     3961 ggcggtcacc agggaactcc acggggtctc atcatggttc aacagcaaga cgtctatttc
     4021 gtaccgagca ggagccagtg gccgatcgtg gccgcgctgg tgctgttcct cacggtgttc
     4081 ggtgccgcgc actggctcaa tgccgagccg ggcgaggccg cgttcggcaa gaccgtcatc
     4141 accatcggcg cactcggcat cctcggcatg ttcttcggct ggttcggctc ggtgatccgc
     4201 gagtcgatcg ccggccgcta caacagccag gtggatacct cgttccgcat ggggatgatg
     4261 tggttcatct tttccgaggt gttcttcttc ggtgcgttct tcggctcgct gttctacgtg
     4321 cgcatgttct cgctgccgtg gctggcgggc agcggccacg gcgtgctgac ccaccagttc
     4381 ctctacgaca cgtactcggg cacctggggt gcggatggcg gcaacggtcc gatggcgatc
     4441 ggcggcgcgt tcagcaccgt ggtgccgtgg ggcctgccgc tgctgaacac gctgatcctg
     4501 ctcacctcca gcgtcaccgt gacgattgcg caccatgcgc tgcgcggcgg gcatcgggcg
     4561 cgcgtgctgg tgtttctcgg gctgacggtg ctcctgggcg cgaccttcgt gatgttccag
     4621 gcccacgaat acgccgaggc gtatcacgag ctgaacctca ctttccagac cggcgtgtac
     4681 ggttcgctgt tctacatgct caccggcttc cacggtttcc atgtgacgat cggcacgatc
     4741 atgctggcgg tgatctggct gcgcgtgctc aaggggcatt tcagccccga gcatcacttc
     4801 ggcttcgagg cggtggcgtg gtactggcac ttcgtcgacg tggtgtggct gtgcctgttc
     4861 ctgttcgtgt acgtgctttg aggcgcgtgc cgaccgggca cgaaaaaacc gccggaaggc
     4921 ggttttttcg tggtgcagtg ggtggtggtc attgaccgac gtcgtgcggg tgcaaccagc
     4981 ccatccagat accgaagacg acgatgccga tcaccacgac cgacagcgcg atgcggcgcg
     5041 tgagcgccca caccacgcgg tcgtcgttgc ccttgtcggt catcatgtag tacagcgcct
     5101 gggccaggct gaaaatgacc accagcagca acaccaccac gatgatcttg aagatggagc
     5161 ccatgtgagc gacccgcgcg atggaatggg cccgagtata accacgcgtg gcggtgcgcc
     5221 gtgctaggcg gattgcgccg gccgccgtgg tgggccatcg cgctgacgct ggcggcggcg
     5281 gcgctgttcg tgcggctcgg catctggcag ttgcatcgtg cggatttcaa ggacgatctg
     5341 ctgcagcgct acgccgccgc ggccaccgcc gcgccgcaga gttttgccag cgtcgcgctg
     5401 gcgccgccgg ccgacgcgtt cccgcgcgtc gacgtgcacg gcgagtacgt tgccgatcgc
     5461 atctacctgc tcgacaaccc caagcacgac gacctcggcg gcgtcgaggt gttcgtgccg
     5521 ctgcggctgg ccggcagctc acgcctgctg ctggtcgatc tcgggttcct gcccggcaac
     5581 ggcaccgacc agacgccgca actgccgccg ctgccgaccg gcgtgcagca cctgcacggc
     5641 ctgtacctgc cgccgccgcc gcgcggcttc gagatgggcg gcaacgcgct ggcgcggcag
     5701 accacgtggc cgaagaagtc gatctatctc gaccccgcgc aggtgtccgc cgatctcggt
     5761 gcgccgctgt atccgcgcgt gctgagcctg gatgccgacc cggcctcgat ctacgtgcgc
     5821 gtgcacacgc tggacttcgg cgacatgccg ccggcccggc atcgcgcgta cgcgttccag
     5881 tggttctcgt tcgcggtggc ggtgatcgtc atcctgatcg tggtgaaccg cgacaagcgc
     5941 cgcaagcggc gccgaccccc aaccgaccat gtggatgatc catgaccgac cccgctgctt
     6001 ccgccctgcg caacggacgg gtgaaactgc tgctggttgc cgcggtgttt ctcgtgccgt
     6061 tcctcgtcgc gctggcgctg acccttgccg gctggcagcc cggcgtgaag ggcaacggcc
     6121 tgccgatcct gccgcagcgc aatttcgccc aggagcagtt gccgatccgg atggcgaacg
     6181 gcggcgactg ggcgtggcgc gacgtgaagc cgcggctgac gctgatcgcc ttgccggggc
     6241 cggattgcgc gacgcggtgc tacgccgcgc tgaccgcgct ggcgaaggcg cgggtgatgc
     6301 tcaaccagaa ccaggaccgg ctgcgcctgc tgtacgtcgg tacgccgccg ggtggcgagg
     6361 aaggcaaggg catggcgaac tactggcggg tcggcaccga tgtcgacgac aggctcggtg
     6421 cctggcggcc gcaggccgcg gacagcctcg gtgcggtact ggtcgagtcc gacggcacgg
     6481 cgctggccag ctatccggcg ggcttcgatc cggccggcgt gctgcgtgac ttgcgcaagg
     6541 tgatccggtg agccgcggcg gcgcctcgcg cggcttgcgc tggttgagcc tgctggcggc
     6601 ggtgttcgcg ctcgggctgg tgatgttcgg cgccttcgtg cggctgtcgg atgccggctt
     6661 gtcgtgcccg gactggccga cctgctacgg cgaggccacc tggccgcagc acgcgcaagc
     6721 cgtggcgcag gcggatgcgg cgtttccgca gcggccgtac gtggcgcaca aggcgtggcg
     6781 cgagcaggtg catcgcatgc tggccggcac gctgggtgtc atcgtgctgg tgatggcggc
     6841 gatggcggcg tggcgacagc ggcgcctgct gtggctggtg ggcggcagtg cgctgttcgc
     6901 cgcggtcggc gtgacgctgt acatgcgcgg cgagcatgtg gtgtcgtcgg tgctggccgc
     6961 cgccgcgatc gcgttgccgc tggtcgcggc cggcctgctg cgcgcgccgg ccgcgctcag
     7021 ggtctgcctc gtcgcgctcg gcgtcatcgt gttccaggcc atgctcggca tgtggacggt
     7081 gaccctgctg ctgaagccga tcgtggtcac cgggcacctg ctcggcggca tgacgacgct
     7141 ggccctgctc ggctatgcgg cactgcgctt cgtcggtgcc ggtgccgacg acgacgccct
     7201 gcgcggcctg cggcatgccg tcgtgctcgg catcgtgctg cttgccggcc agatcgcgct
     7261 gggcggctgg acctcgtcga actacgccgc gctcgcctgc ggcttcggca gcgcggcgtt
     7321 tccgcattgc ctcggccagt ggtggccggc ggccgacttc caccagggct tcatcctgtg
     7381 gcgcggcatc ggcgtggact acgaaggcgg cgtgctcgac ggcaccgcgc gcacggccat
     7441 ccagctggtg catggcctcg gcgcgctggt ggtggcgtgc tacctcgcgt ggctggcgtg
     7501 gcgcctcgcg cggcgcggcc tgcacgcgtg gggcggcgcg atcgccgtcg cgctggcatg
     7561 ccaggtgctg ctcggcatca gcaacgtgta tttcggcctg ccgctggcgg tggccaccgc
     7621 gcacaacggc atggcggccc tgttactgtt gaccctcgtg gcgactttgg cacgcacgca
     7681 gcgcagggcg ctgctgcagg gggcaacggc atgaccgggg tgatgggcga gtatttccag
     7741 ttgaccaagc cgcgcatcgt cgcgctactg gtgttttgcg cggtgatcgg catgtttctc
     7801 gcggtgccgg gcctgccgcg ctggcaggcg ctgatcttcg gcacgctggg catctggctg
     7861 gcgtcgtcgt ccgcggcggc gttcaaccag ctgatcgacc agcgcatcga caaggtgatg
     7921 gtgcgtacct cgcaccggcc gctgccggcc gggcagctca agccgcgcca ggcattcgcg
     7981 ttcgcggtca cgctcggcat cgtgtcgatg atcgtgctgg cgctgtgggt gaacgtgctg
     8041 accgcggtgc tgaccttcgt cggcctgatc ggatacgcgg tgatctacac cgccgtgctc
     8101 aagcgcgcgt cgccgcagaa catcgtgatc ggcgggctgg ccggcgcgat cccgccggtg
     8161 atcggctgga ccgcggtcac cggttcgctg cacccgtatg cgctgcagct
//
LOCUS       DASSVL010000415         2324 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1040678,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000415 DASSVL010000000
VERSION     DASSVL010000415.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2324)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2324)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2324
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1040678"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..600)
                     /locus_tag="VFM52_07310"
     CDS             complement(<1..600)
                     /locus_tag="VFM52_07310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007082586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HET8765014.1"
                     /translation="MAGNPARRWSWLAIVAAIVLVLWRLSPMLMPFVVAAMFAYLGDP
                     LADRLERWHLGRTLAVSVVFIALGLVVVGVLLLVLPLLSRQVANLVQNVPHYVAWAEG
                     TAWPWLQTRLHLDPHTFDADQVAAALKAHIGSVGGIAGQVLGTVSRSGLGVVLWLTNL
                     VLIPVVTFYLLRDWDRLVAAVDRLLPRAIEPTVARLARDA"
     gene            complement(601..1626)
                     /locus_tag="VFM52_07315"
     CDS             complement(601..1626)
                     /locus_tag="VFM52_07315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007082587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2066 domain-containing protein"
                     /protein_id="HET8765015.1"
                     /translation="MRVFPLRLLMLCAIALLGGLAMSPSVRAQAQPQAASAASPYAVT
                     VPVPDTSDAQRTAAFSGALAQVLARVAGGQDLRGKPGYDAALKNAAALVRHFQYARAA
                     TGMSLAISFEPGAVRHLVTTLGVTNAATGKPPLLLLVTGTNGAPLAKPALASLAGAAA
                     ARGYEVAYADPSGTLDAGKVAAADPAALAAVNRQYHTGLVLLGKLGTGTADWTLVAGG
                     KVQHWTDKADTEDALLAAAGNSAVDHIARQLNVVGAAVNTLKLWVSGVDSAMDYAQLI
                     NTVRADPSVRSVVTLGADNDGLLLQVRAAMPADALAANLAASGRMIRADAHAGTDASL
                     RWLRGAR"
     gene            1808..>2324
                     /gene="purM"
                     /locus_tag="VFM52_07320"
     CDS             1808..>2324
                     /gene="purM"
                     /locus_tag="VFM52_07320"
                     /EC_number="6.3.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014402406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004641 -
                     phosphoribosylformylglycinamidine cyclo-ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine cyclo-ligase"
                     /protein_id="HET8765016.1"
                     /translation="MSDALTYRAAGVDIDAGNALVERIKPLVKRTRRPEVMGGLGGFG
                     GLFDLSGKYREPVLVSGTDGVGTKLKLAQELGRHDTIGIDLVGMCVNDVLVQGAEPLF
                     FLDYFATGKLDPDQGASIVGGIADGCRQAGCALIGGETAEMPGMYAAGDYDLAGFAVG
                     AVERGEQLDGTK"
BASE COUNT          353 a          849 c          825 g          297 t
ORIGIN      
        1 ggcatcgcgc gccagccgtg ccaccgtggg ctcgatcgcg cgcggcaaca ggcgatcgac
       61 ggcggccacg aggcggtccc agtcgcgcag caggtagaac gtcaccaccg ggatcagcac
      121 caggttggtc agccacagca ccacgccgag cccggaacgc gacaccgtgc cgagcacctg
      181 cccggcgatg ccgcccaccg aaccgatgtg cgccttgagc gccgccgcca cctggtcggc
      241 gtcgaacgta tgcgggtcga ggtgcagcct ggtttgcagc cacggccatg cggtgccctc
      301 ggcccaggcc acgtagtgcg gcacgttctg caccaggttg gcgacctgcc gcgacaacag
      361 cggcagcacc agcagcagca cgccgaccac gaccagtccc agggcaatga acaccacgct
      421 gacggcgagc gtgcggccga ggtgccagcg ctcgaggcgg tcggccagcg gatcaccgag
      481 gtaggcgaac atggccgcca cgacgaacgg catcagcatc ggcgacagcc gccacagcac
      541 cagcacgatg gcggcgacga tcgccagcca ggaccagcgc cgggccggat tgcccgccac
      601 tcagcgcgcc ccgcgcagcc agcgcaggct ggcgtcggtg ccggcatgcg catccgcgcg
      661 gatcatgcgc ccgctggccg cgaggttggc cgccagcgcg tcggccggca tcgcggcgcg
      721 cacctggagc agcaggccat cgttgtccgc gccgagcgtg accacgctgc gcaccgacgg
      781 gtcggcgcgc accgtgttga tcaactgcgc gtaatccatc gcgctgtcca cgccgctgac
      841 ccacagcttc agcgtattga ccgccgcacc gacgacgttg agctggcgcg cgatgtggtc
      901 gaccgcgctg ttgccggcgg cggccagcag cgcgtcctcg gtgtccgcct tgtcggtcca
      961 gtgctgcacc ttgccgccgg cgaccagcgt ccagtccgcc gtgcccgtac ccagcttgcc
     1021 cagcagcacg aggccggtgt ggtactgccg gttgaccgcg gccagcgcgg ccgggtccgc
     1081 tgccgcgact ttcccggcat ccagcgtgcc ggatggatcg gcataggcca cttcatagcc
     1141 acgcgccgcg gcggcgccgg caaggcttgc cagcgccggc ttggcgagcg gcgcgccgtt
     1201 ggtgccggtc accagcagca gcagcggcgg cttgccggtc gcggcgttgg tcacgccgag
     1261 cgtggtgacg agatgacgca ccgcgccggg ctcgaagctg atcgccaggc tcatgccggt
     1321 tgcggcccgg gcgtactgga aatggcgcac cagcgcggcc gcattcttga gcgcggcgtc
     1381 gtagccgggc ttgccgcgca gatcctggcc gcccgcgacg cgcgccagca cttgcgccag
     1441 cgcgccggaa aacgccgccg tgcgctgcgc gtcgctggtg tcgggaaccg gcaccgtgac
     1501 cgcatacggc gacgcggccg acgcggcctg cggctgcgcc tgggcgcgca ccgacggcga
     1561 catggccagc ccgcccagca gggcgatcgc gcacagcatc agcaaccgca gcggaaacac
     1621 gcgcatcgaa ggggcaccac acggcgaagg caggtcgaaa gtctgcccaa tcggcgcctc
     1681 gccgtccatg ccgcgtgcgg cagaccgtgg ccggatcggc gctgcccctg ggtccccggc
     1741 gccgccgcac gagcctgcgc cggccgcgtg cagtagaatt gtgcgtttcc aacggccggt
     1801 tcacgccatg tccgacgccc tcacctaccg cgccgccggg gtcgatatcg acgccggcaa
     1861 tgcgctggtc gaacgcatca agcccctggt caagcgcacc cgccgcccgg aggtgatggg
     1921 cgggctgggc ggtttcggcg gcctgttcga cctgtccggc aaataccgcg agccggtgct
     1981 ggtgtccggc accgacggcg tcggcaccaa gctcaagctg gcgcaggaac tcggccgcca
     2041 cgacaccatc ggcatcgatc tcgtcggcat gtgcgtcaac gacgtgctgg tgcagggcgc
     2101 cgagccgctg ttcttcctcg actatttcgc caccggcaag ctcgatccgg accagggcgc
     2161 ctcgatcgtc ggcggcatcg ccgatgggtg ccggcaggcc ggctgcgcgc tgatcggcgg
     2221 cgaaaccgcg gagatgccgg ggatgtacgc tgcgggcgac tacgacctgg ccgggtttgc
     2281 ggtgggcgcg gtggagcgcg gcgagcagct cgacgggacg aagg
//
LOCUS       DASSVL010000416         2078 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1337065,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000416 DASSVL010000000
VERSION     DASSVL010000416.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2078)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2078)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2078
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1337065"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(216..1025)
                     /locus_tag="VFM52_07325"
     CDS             complement(216..1025)
                     /locus_tag="VFM52_07325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017462217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HET8765017.1"
                     /translation="MHLRTTPLLLAAALLAACATSPTGRHQLMMVSDAQMSQMGLTAF
                     DGMRKQGKFVDAPRERAYATCVADALVKVLPAPWNTQAWEVQIVGDDSANAFALPGGR
                     IGVNRGMFKVATDENQLAVVLGHELSHVVARHGAERVSDNYAAQAVVLAGTAYAASQG
                     TDAGRTAAALGLGAEVGLLLPFSRTQESEADGLGLRYMAQAGFDPRAAATLWQKMAQQ
                     GGGKVPVFLSTHPAPGNRATTLAAEAQQLLPTYEAARASGHAPDCQPPANT"
     gene            complement(1043..1894)
                     /locus_tag="VFM52_07330"
     CDS             complement(1043..1894)
                     /locus_tag="VFM52_07330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008435187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HET8765018.1"
                     /translation="MTKRLLATVLILLAMAASTAQAATSKDVELSAIVEGTIVLAPDG
                     HVQDVVVPDAAKYGQPVVDMVRTTALKWRFDPVVVDGQPVIAKSSMHARVVLKKNAAG
                     DYVAWVRGATFGDTDANNTSVVRASPANLKLPPRFPAEALHSKAEGRVYLALRIDRAG
                     HVVDAVVEQVNLANTGPEAVLNRSRKAFADASLVAARRWSYMVPTTGKLAGRDNWTVR
                     TSIRFFLRGAGMPKDGSAWAAYIPGPYTPAPWVDKPNAGAADVLADDTVHTDGAGPAL
                     LTALPQG"
     gene            1893..>2078
                     /locus_tag="VFM52_07335"
     CDS             1893..>2078
                     /locus_tag="VFM52_07335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8765019.1"
                     /translation="MALSSSAANGACRWSVAKRIGSRQRARLRRVRDRRLGEHFPWRH
                     GRRPQYVGPPSAWQTWCG"
BASE COUNT          285 a          699 c          746 g          348 t
ORIGIN      
        1 tgttgatgcc ggcgacggcg gtgacgtgcg gtgcggcatg cacggccgtg gtggcgcacg
       61 cgagcgcacc gagtgccagc gtggcggaca acagcagggc aagcggccgc ggtgacatcg
      121 cgttctccgt gggcgccgca agtcacggcg ttggagagcg aaacgcgggg tttcccgtgc
      181 tgtttacccg cgccggtcgg cgcgttcagc cacgatcagg tattggccgg cggctggcag
      241 tcgggggcat gcccgctggc gcgtgcggcc tcgtaggtcg gcagcagttg ctgcgcctcg
      301 gcggcaaggg ttgttgcgcg gttgccgggc gccgggtggg tggacaggaa gaccggcacc
      361 ttgccgccgc cctgttgcgc catcttctgc cacagcgtcg cggcggcgcg cggatcgaaa
      421 ccggcctgcg ccatgtagcg caagccgagc ccatccgcct cgctttcctg cgtgcgcgag
      481 aacggcagca gcaggccgac ttccgcgccg aggccgagtg ctgcggcggt acgcccggca
      541 tccgtgccct ggctggcggc atatgcggta ccggccagca ccaccgcttg cgccgcgtag
      601 ttgtccgaca cccgctcggc gccgtgccgc gcgaccacgt gcgacagctc gtggcccagc
      661 acgacggcga gctggttctc gtccgtcgcc accttgaaca tgccgcggtt cacgccgatg
      721 cgtccgccgg gcagcgcaaa cgcattcgcg ctgtcgtcgc cgacgatctg cacctcccac
      781 gcctgcgtgt tccacggcgc cggcaacacc ttgaccagcg catcggccac gcacgtcgcg
      841 tatgcgcgct cgcgcggcgc atcgacgaac ttgccctgct tgcgcatgcc atcgaacgcg
      901 gtcaacccca tctggctcat ctgcgcatcg gacaccatca tcagctggtg ccggccggtg
      961 ggggaggtcg cgcatgcggc gagcagcgcg gcggcgagca gcaggggcgt ggtgcgcagg
     1021 tgcatggtgg tctccgtaag cgtcagccct ggggcaaggc ggtcagcagc gccgggccgg
     1081 caccatcagt gtgcacggtg tcgtcggcga gtacatcggc ggcaccggca ttgggcttgt
     1141 ccacccaggg ggctggcgtg tacgggcccg gaatataggc cgcccaggcg ctgccgtctt
     1201 tgggcatgcc ggcgcccctc aggaagaagc ggatcgaggt tcgaaccgtc cagttgtcac
     1261 ggccggcaag cttgccggtg gtgggaacca tgtagctcca gcgccgggct gccacgagcg
     1321 atgcgtcggc aaaagccttg cggctgcggt tgagcaccgc ctcgggcccg gtgttggcga
     1381 ggttcacctg ttccacgacg gcgtccacga cgtggcctgc gcggtcgatg cgcaacgcga
     1441 ggtataccct gccttcggcc ttggaatgga gcgcctccgc gggaaatctg ggcggcagtt
     1501 tcaggttcgc cggcgaggcg cgcacgacgc tggtattgtt ggcgtcggtg tcgccgaatg
     1561 tcgcgcccct gacccatgcg acgtagtcgc cggcggcgtt cttcttcagc accacgcgcg
     1621 cgtgcatgct gctcttggca atgaccggct gtccgtcgac gacgaccggg tcgaagcgcc
     1681 acttgagcgc cgtggtgcgc accatgtcga ccacgggctg tccgtacttc gcggcatccg
     1741 gcaccaccac gtcctgcaca tggccgtcgg gcgccagcac gatcgtgcct tcgacgatgg
     1801 cggagagttc cacatccttg ctggtggcgg cctgcgcggt gctcgccgcc atggcgagca
     1861 ggatcagcac ggttgccagc aatcgctttg tcatggcgct ttcctcgtcg gcggcgaacg
     1921 gtgcttgccg gtggtcggtg gcgaaacgga tcggcagccg gcaacgggcg cgcctgcgcc
     1981 gtgtgcgcga tcgtcgtctt ggtgagcatt tcccctggcg gcatggccgc cgaccgcagt
     2041 atgtcggccc gccatcggcg tggcaaacgt ggtgcggc
//
LOCUS       DASSVL010000417         2462 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_729968, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000417 DASSVL010000000
VERSION     DASSVL010000417.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2462)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2462)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2462
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_729968"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..522)
                     /locus_tag="VFM52_07340"
     CDS             complement(<1..522)
                     /locus_tag="VFM52_07340"
                     /inference="COORDINATES: protein motif:HMM:NF013460.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b/b6 domain-containing protein"
                     /protein_id="HET8765020.1"
                     /translation="MTRVQRHGWRARCLHGANAVVLLVLLATGLALGDWLPGGWVAAV
                     GGHDAVDAVHRLLGLAFVGVAVLLSIVLWRGTAWLVRELTRFRAGDGRWPLAYFRHAL
                     APGRRAAPFHAGWFDPLERLVLTVLLAATVVAGVSGVYLYWLPAAPAWVFLVAIRAHV
                     YVAWLLIAMLAVHV"
     gene            complement(761..2125)
                     /locus_tag="VFM52_07345"
     CDS             complement(761..2125)
                     /locus_tag="VFM52_07345"
                     /inference="COORDINATES: protein motif:HMM:NF027814.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 27 protein"
                     /protein_id="HET8765021.1"
                     /translation="MAHWLRSAWLLPFLLAAAAAAGAQEVAPTPPMGWNSWDAYGLTI
                     DEAGFRANATELAKLHAYGWTYAVIDEGWYMGNPFGDTLRHRDYALDAHGLLVPSTKR
                     FPSAADGQGFKAIADWVHAQGLKFGIHIVRGIPKQAVEANLPIAGSSFHARDAADTAA
                     TCPWDDGDYGVRDNAAGQAYYDSMLALYAHWGVDFLKVDCIADHPYRISEIRQIAAAI
                     GKTGRPIVLSLSPGPTQLSHAAEIRRYGQMWRISNDVWDGWTFAHEHPNDDFPMGVRD
                     IFDRLPPWAGQARDGRWPDADMLPFGVLAPHPGWGEPRHSRLTLDEERTQLTLLAIAR
                     APLILGANLTRLDDATRALITNREVIAVDQRSHGNRPLEHLPAGFEQVRVWVASGEAG
                     ERYLAVFNLDDKPVSLQAAWQQLGLASGNHAARELWSGHRLRASDRLPIRLPAHGCVL
                     YSVN"
     gene            complement(2200..>2462)
                     /locus_tag="VFM52_07350"
     CDS             complement(2200..>2462)
                     /locus_tag="VFM52_07350"
                     /inference="COORDINATES: protein motif:HMM:NF028067.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="alpha-L-fucosidase C-terminal domain-containing
                     protein"
                     /protein_id="HET8765022.1"
                     /translation="AQDVRFTTKDATLFAIALGRPDAPRLTVRSLASNATGSVERVEL
                     LGSPEPLRFKRDAQGLTLELPHSVPGEHAIAFRIMGRGLTAA"
BASE COUNT          424 a          854 c          822 g          362 t
ORIGIN      
        1 gacgtgcacg gcgagcatcg cgatcagcag ccaggcgacg tagacgtgcg cacggatcgc
       61 gacgagaaac acccacgccg gcgccgccgg cagccagtac aggtacacgc cgctcacgcc
      121 ggccaccacc gtcgccgcca gcagcaccgt cagcaccagg cgttcgagcg gatcgaacca
      181 gccggcatgg aacggcgccg cgcggcggcc gggcgcgagc gcgtggcgga aataagccaa
      241 gggccagcga ccgtcgccgg cgcgaaaacg cgtcagctcg cgcaccagcc aggcggtgcc
      301 gcgccacagc acgatgctca acagcacggc gacgccgacg aaggcgagcc cgagcaggcg
      361 atgcacggca tcgaccgcat catgcccgcc gaccgcggcg acccagcccc ccggcagcca
      421 gtcgcccagc gccagcccgg tagccagcag caccagcagc accacggcgt ttgcgccgtg
      481 caggcagcgc gcacgccagc cgtggcgctg cacccgcgtc atgtccatcg cgcgcctagc
      541 ggacggtgaa cgccacgctc ttcggcggca gcagtggctg atgcgtcggc cccgccagtt
      601 ccaccgccac cgtgtgcttg ccggccggca acggcaagcg cgggatgcat gtggatcccg
      661 ctcaggctga acacgcacgg tccatccctg tgtggctctg atcttctgca gcgcatggct
      721 accggacaaa cgtttcgcgc tcggcagccg ccgtcggacc ctagttgacc gagtaaagca
      781 cgcacccatg cgccggcaac cggatcggca ggcggtcgga tgcccgcaag cgatggccgc
      841 tccacaactc gcgtgcggca tggttgcccg aagccaggcc aagctgctgc caggccgcct
      901 gcaggctcac cggcttgtcg tccaggttga acacggccag gtagcgttcg ccggcctcgc
      961 cggatgccac ccacacgcgc acctgctcga agcctgccgg cagatgttcg agcggacgat
     1021 tgccgtgact gcgctgatcg accgcgatga cctccctgtt ggtgatcaac gcacgcgtgg
     1081 catcgtccag cctggtgaga ttggcgccaa ggatcagcgg cgcgcgcgcg atggcgagca
     1141 gggtcagctg cgtgcgctcc tcgtccagcg tcaggcggga atggcgcggt tcgccccatc
     1201 ccggatgcgg cgcaagcaca ccgaacggca acatgtcggc atcgggccag cggccatcgc
     1261 gagcttgccc tgcccaaggc ggcaggcgat cgaaaatatc gcggacgccc atggggaaat
     1321 catcattggg atgttcgtgc gcgaacgtcc agccatccca cacgtcgttg gagatgcgcc
     1381 acatctggcc gtaccggcga atttccgcgg cgtgcgaaag ctgggtgggg ccgggcgaca
     1441 ggctgagcac gatggggcgg ccggttttcc cgatcgccgc cgcgatctgg cgaatctcgc
     1501 tgatgcggta agggtgatcg gcaatgcagt cgaccttgag gaaatccacg ccccaatgcg
     1561 cgtacagcgc cagcatcgaa tcgtaatagg cctggcctgc cgcgttgtca cgcacgccgt
     1621 agtcgccgtc gtcccacggg caggtggcgg ccgtatcggc ggcgtcccgc gcatggaagc
     1681 tggacccggc gatcggcagg ttcgcttcca ccgcctgctt ggggatgccg cgcacgatat
     1741 ggatgccgaa cttcaggcct tgcgcatgaa cccagtcggc gatggccttg aagccttggc
     1801 cgtcggcggc ggaaggaaag cgcttcgtgg acggaaccag caggccgtgc gcatccaagg
     1861 cgtaatcgcg atgccgcaag gtgtcgccga acggattgcc catgtaccag ccttcgtcga
     1921 tcacggcata cgtccagccg taagcgtgca gcttggccag ttccgtggcg ttggccctga
     1981 acccggcttc gtcgatggtc aggccatagg catcccagct gttccagccc atgggcggcg
     2041 taggggcgac ttcctgcgcg ccagctgccg cggcagcggc gagcaggaac ggtaacagcc
     2101 atgcgcttct cagccagtgg gccatgcggt tcgttctctc ttttgagcgg tgtgttcgct
     2161 ggacgcaggc cgggacgaag tcccgcatcg ccgtcccgtt tacgcggcgg tcaagccgcg
     2221 ccccatgatc ctgaaggcga tggcgtgttc cccaggcacg ctatgcggca attccagcgt
     2281 caggccctgc gcgtcgcgct tgaaccgcag cggctccggc gagccgagca attccacgcg
     2341 ctcgacgctg cccgtcgcat tcgacgccag cgatcgcacc gtcaggcgtg gtgcatcggg
     2401 gcgccccagt gcgatggcga acagcgtcgc gtccttggtg gtaaagcgca cgtcctgcgc
     2461 gg
//
LOCUS       DASSVL010000418         2062 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_151087, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000418 DASSVL010000000
VERSION     DASSVL010000418.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2062)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2062)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2062
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_151087"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..199
                     /locus_tag="VFM52_07355"
     CDS             <1..199
                     /locus_tag="VFM52_07355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008211731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8765023.1"
                     /translation="VNIDALTVAATHDPSVSQLTLVLHGDEGTLQQILRQVRKLVDVL
                     DASSLSLVGTGARSHLVATPA"
     gene            196..1758
                     /gene="ilvA"
                     /locus_tag="VFM52_07360"
     CDS             196..1758
                     /gene="ilvA"
                     /locus_tag="VFM52_07360"
                     /EC_number="4.3.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008211732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004794 - L-threonine ammonia-lyase
                     activity [Evidence IEA];
                     GO_process: GO:0009097 - isoleucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="threonine ammonia-lyase, biosynthetic"
                     /protein_id="HET8765024.1"
                     /translation="MNARLAERAPDTAPSDLELLRHTLAARVYDVAQETPLEDARLLA
                     ARLGNRVLLKREDLQSVFSFKLRGAYNKVASLDAAQRARGVIAASAGNHAQGVALAAV
                     KLGTRAVIVMPLTTPRVKVDAVRRIGGDAVEIVLEGDSYSDAQTAATRIQAERGLVFV
                     HPFDDLDVIAGQATVGMEILRQCPAPDAVFVPVGGGGLIAGIASYIKAISPHTLVIGV
                     QADDSDAMAQSLERGERVYLPDVGLFADGTAVKQVGALTFALCQRHVDAMVRVDGDAL
                     CAAIRDVYQETRSVPEPAGALAVAGLKQYAARHALKGATLAAVISGANMNFERLRFVA
                     ERAEAGEQCEALFAVTIPEERGSFRRFCAALGRHQITEFNYRIGDARQAHIFVGVQTS
                     GRDERALLAGRFRTEGFAVLDLSGDEMAKLHLRYMVGGRTPLARDEHLLRFDFPERPG
                     ALPEFLAHLHPDWNVSLFHYRNHGADHGRILVGIQVPDRECALLQRFLDTLGYPYADE
                     SANPAYRLLLRE"
     gene            complement(1800..>2062)
                     /locus_tag="VFM52_07365"
     CDS             complement(1800..>2062)
                     /locus_tag="VFM52_07365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007805267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="phosphoadenosine phosphosulfate reductase family
                     protein"
                     /protein_id="HET8765025.1"
                     /translation="DILERHRGRWKLHPIVDWNDHDVWRYLHRHDLPYHPLWHAGYVS
                     IGDTHTTSRWQPGMREEDTRFFGLHRECGLHADLGHSDVSAA"
BASE COUNT          305 a          746 c          709 g          302 t
ORIGIN      
        1 cgtcaacatc gacgcactga ccgtcgccgc cacccacgat ccgtcggtgt cgcaactgac
       61 cctggtgctg catggcgacg agggcacgct gcagcagatc ctgcgccagg tgcgcaagct
      121 agttgacgtg ctggacgcga gcagcctgtc actggtgggc accggcgcgc gcagccacct
      181 ggtggctacc ccggcatgaa tgcgcggctg gccgagcgcg cgcccgacac cgcgccttcc
      241 gatctcgaac tgctgcgcca cacgctggcc gcgcgcgtct acgacgtggc ccaggaaacg
      301 ccgctcgaag acgccaggct gctcgccgcg cggctcggca accgcgtgct gctgaaacgc
      361 gaagacctgc agagtgtgtt ctcgttcaag ctgcgcggcg cgtacaacaa ggtcgcttcg
      421 ctcgacgccg cgcagcgcgc gcgcggcgtg atcgcggcct cggccggcaa ccacgcgcaa
      481 ggcgtcgcgc tcgcggcggt gaagctcggc acccgcgcgg tgatcgtgat gccgctgacc
      541 acgccgcggg tcaaggtgga cgccgtgcgc cgcatcggcg gcgacgcggt ggagatcgtg
      601 ctcgaaggcg actcctacag cgacgcgcaa accgccgcca cgcgcatcca ggccgagcgc
      661 ggcctggtgt tcgtgcaccc gttcgacgat ctcgacgtga ttgccggcca ggccacggtc
      721 ggcatggaga tcctgcgcca gtgcccggcg ccggacgcgg tgttcgtgcc ggtcggcggc
      781 ggcggcctga tcgccggcat cgccagctac atcaaggcca tttcgccgca cacgctggtc
      841 atcggcgtac aggcggacga ttccgacgcg atggcgcaat cgctcgaacg cggcgagcgc
      901 gtgtacctgc ccgacgtcgg cctgttcgcc gatggcaccg cggtgaagca ggtcggcgcg
      961 ctgaccttcg ccctgtgcca gcgtcatgtg gacgcgatgg tgcgcgtcga tggcgatgcg
     1021 ctgtgtgcgg cgatccgcga cgtctaccag gaaacccgca gcgtgcccga gccggccggt
     1081 gcgctggccg tggccgggct caagcaatac gccgccaggc acgcgctgaa gggtgcgacg
     1141 ctggcggcgg tgatctccgg cgccaacatg aacttcgagc gcctgcgctt cgtcgccgaa
     1201 cgcgccgagg ccggcgagca gtgcgaggcg ctgttcgcgg tgaccatccc cgaggagcgc
     1261 ggcagtttcc gccgcttctg cgccgcgctt ggccgccacc agatcaccga gttcaactac
     1321 cgcatcggcg atgcgcgcca ggcgcacatc ttcgtcggcg tgcagacctc gggccgcgac
     1381 gagcgcgcgc tgctcgccgg gcgtttccgc accgaaggct tcgccgtgct cgacctctcc
     1441 ggggacgaga tggccaagct gcacctgcgc tacatggtcg gcggacgcac accgctggcg
     1501 cgcgacgagc acctgctccg cttcgatttc cccgagcgcc ccggcgcgct gcccgagttc
     1561 ctcgcccacc tgcacccgga ctggaacgtc agcctgttcc actaccgcaa ccacggcgcc
     1621 gaccacggcc gcatcctggt cggcatccag gtgcccgacc gcgagtgcgc cctgctgcaa
     1681 cgcttcctcg acacgctcgg ctatccgtac gccgacgaaa gcgcgaaccc ggcgtaccgg
     1741 ctgctgctgc gcgagtgaac ccggcggcgt gacggcggcc gcccgatccg ctacgccact
     1801 caagccgccg acacgtccga gtgccccagg tccgcatgca ggccgcactc gcggtgcagg
     1861 ccgaagaaac gggtgtcctc ctcgcgcatg ccgggctgcc agcggctggt ggtgtgggtg
     1921 tcgccgatcg acacgtagcc agcgtgccac agcgggtggt agggcaagtc gtggcgatgc
     1981 aggtagcgcc atacgtcgtg gtcgttccag tccacgatcg ggtgcagctt ccagcgcccg
     2041 cggtggcgtt cgaggatgtc gg
//
LOCUS       DASSVL010000419         2639 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_744099, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000419 DASSVL010000000
VERSION     DASSVL010000419.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2639)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2639)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2639
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_744099"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>2639)
                     /locus_tag="VFM52_07370"
     CDS             complement(<1..>2639)
                     /locus_tag="VFM52_07370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017463824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015473 - fimbrial usher porin activity
                     [Evidence IEA];
                     GO_process: GO:0009297 - pilus assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fimbria/pilus outer membrane usher protein"
                     /protein_id="HET8765026.1"
                     /translation="AAAATAGPDASLDASFDRSMLSGAGQNTTDLARFERGNFVAPGS
                     YSLDLFLNETRVGRANVRFVAPSANASAVPCVTADLLDRFGLHPQLTPDTEAALKAPG
                     ACVRFDQIIPGASLSVDMADLKLTANVPQAALGLAARGYVDPKYWDAGVDAGLLNYRF
                     NSYRTQSGGQAQTSAYLGLNAGVNLGAWHLRHDSALTWQSAIGNVAARRRFQTIDTYV
                     QRDLPAWRAQLTIGDSFTPGDVFDSFGLRGVQVATDDRMLPQSLRGYAPTVRGVAETN
                     AKVTVRQNGLVIYQTTVPPGPFVIDDLYATGYSGNFDVEVDEANGRVHHFSVPFASVP
                     QLLRPGLSRFSIAAGQLRDTTIAGHPNVAQLTFQHGFTNLLTGYTGAAAATGYGEMLL
                     GGALNTRVGAVALDVSSARTRIPGMHTLSGQSLRLSYSKTLAETGTSLTLAAYRYSTS
                     GFLGLDDAMRARDYASRGLPAFATGAAAPITLNGVPLSPLLTPAQQAALAGIDPLTLL
                     APRGVDRMRNNFSLTLSQRLGDRAGSLYVSGSTHDYWNRGGRDTQYQVGWNNTLGRLG
                     YGLSASRERDLFGRTESRYMLNLTVQLGTGAHAPALMGTVSHDDAGGNQAQATLSGTA
                     GADNQYTYGATLAHGSGGFGASGTTVNANGGYRGPHVELTAGLGSGSGYSQASFGAAG
                     GIVAWAGGVSFGQSLGDTVAIVQAPGATGARVGNAVGVSIDRSGHALVPYLNPYIQNT
                     IDIDPAGVPLDVQLDGTSVKVAPHAGAVVLVKFKTESGHFVLIRTHLASGGLLPFGAE
                     VLDAKGQPIGVVGQAGQIMARLPNDAGTLQVEWQADDGANMSCRLPYSLAPDGIDKTP
                     ARGRGITQIDAVCRALATTELQP"
BASE COUNT          358 a          860 c         1010 g          411 t
ORIGIN      
        1 catggctgaa gctcggtagt ggcgagggct cggcagacgg cgtcgatctg cgtgatgccg
       61 cggccgcggg ccggggtctt gtcgatgccg tccggcgcca ggctgtacgg caggcggcaa
      121 ctcatattcg ccccgtcgtc cgcctgccac tccacctgca aggtgccggc atcgttcggc
      181 aaccgcgcca tgatctggcc ggcctgaccg acgacgccga tgggctggcc cttggcgtcc
      241 agcacctcgg cgccgaacgg cagcagaccg ccactggcca ggtgcgtgcg gatcagtacg
      301 aagtggccgc tctcggtctt gaacttcacc agcaccacgg cgccggcatg cggggccacc
      361 ttgacgctgg tgccgtcgag ctgcacgtcg agcggcacgc cggccggatc gatgtcgatg
      421 gtgttctgga tgtacggatt caggtacggc accagcgcgt ggccggagcg gtcgatgctg
      481 acaccgacgg cgttgccgac gcgcgcgccg gtcgcgcccg gcgcctgcac gatggcgacg
      541 gtatcgccga gcgactggcc gaagctcacg ccgccggccc aggcgacgat accgccggcg
      601 gcgccgaacg aggcttgcga gtagccgctg ccgctgccga ggccggcggt cagctcgacg
      661 tgcgggccgc ggtagccgcc gttggcgttt accgtggtgc cgctcgcgcc gaagccgccg
      721 ctgccgtgcg cgagcgtcgc accgtaggtg tactggttgt ccgcgccggc ggtaccggaa
      781 agcgtggcct gcgcctggtt gccgccggcg tcgtcgtggc tgaccgtgcc catcagcgcc
      841 ggcgcgtgcg cgccggtgcc gagctgcacg gtgaggttca gcatgtagcg gctttcggtg
      901 cgcccgaaga ggtcgcgctc gcggctggcg gaaagcccgt agccgagccg gccgagggtg
      961 ttgttccagc ctacctggta ttgcgtgtcg cgcccgccgc ggttccagta gtcgtgcgtc
     1021 gagccgctca cgtagagcga acccgcacgg tcgcccaggc gctggctgag cgtcaggctg
     1081 aagttgttgc gcatgcggtc gacgccgcgg ggcgcgagca gcgtcagcgg gtcgatgccg
     1141 gcgagcgcgg cctgctgtgc cggcgtgagc aggggcgaca gcggcacgcc gttgagcgtg
     1201 atcggggcgg ccgcgccggt ggcgaatgcc ggcaggccgc ggctggcgta gtcgcgcgcg
     1261 cgcatcgcgt cgtcgaggcc gagaaaaccg ctggtcgagt agcggtatgc ggccagggtg
     1321 agcgaggtgc cggtttccgc cagcgtcttg ctgtagctca agcgcaagct ctgaccagac
     1381 agcgtatgca tgccggggat gcgcgtgcgc gcgctgctga cgtcgagcgc gacggcgccc
     1441 acgcgggtat tgagcgcacc gccgagcagc atctcgccgt agccggtggc ggctgcggcg
     1501 ccggtatagc cggtcaggag attggtgaag ccgtgctgga aggtcagctg cgcgacgttc
     1561 gggtggccgg cgatggtggt gtcacgcaac tggccggcag cgatgctgaa gcggctgagg
     1621 cctgggcgca gcagctgcgg caccgacgcg aacggcacgc tgaagtggtg tacgcggccg
     1681 ttcgcctcgt ccacctccac gtcgaagttg ccgctgtagc cggtggcgta caaatcgtcg
     1741 atcacgaacg ggccgggcgg cacggtggtc tggtagatca ccaggccgtt ctggcgcacc
     1801 gtcactttcg cgttggtttc ggcgacgccg cgcaccgtcg gcgcgtagcc gcgcagcgat
     1861 tgcggcagca tgcggtcgtc ggtggcgacc tgcacgccac gcaggccgaa gctgtcgaac
     1921 acgtcgcccg gcgtgaagct gtcgccaatc gtcagctgcg cgcgccatgc cggcaggtcg
     1981 cgctgcacat aggtgtcgat ggtctggaac cggcgccgtg cggcgacgtt gccgatggcc
     2041 gactgccagg tcagcgcgga atcgtggcgg aggtgccagg caccgaggtt cacgcccgcg
     2101 ttgaggccga gataggcgga ggtctgcgcc tgcccgccgc tttgcgtgcg gtagctgttg
     2161 aagcggtagt tgagcaggcc cgcgtcgacg ccggcgtccc agtacttggg gtcgacgtag
     2221 ccgcgcgcgg ccagccccag cgcggcctgc ggcacgttgg cggtgagctt gaggtcggcc
     2281 atgtcgacgc tgaggctcgc gcccggaatg atctggtcga agcggacgca ggcaccgggt
     2341 gccttgagcg ccgcctcggt gtccggcgtg agctgcggat gcaggccgaa ccggtcgagc
     2401 aggtcggcgg tcacgcatgg caccgcgctc gcgttcgccg atggcgcgac gaagcgcacg
     2461 ttggcgcggc cgacgcgagt ctcgttcagg aacaggtcga ggctgtagct gcccggcgcg
     2521 acgaagttgc cgcgctcgaa gcgcgccaga tcggtggtgt tctgcccggc gccggacagc
     2581 atgctgcggt cgaagctggc atcgagcgac gcgtccggtc cggctgtcgc ggcggctgc
//
LOCUS       DASSVL010000420         2768 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1195967,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000420 DASSVL010000000
VERSION     DASSVL010000420.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2768)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2768)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2768
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1195967"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..171
                     /locus_tag="VFM52_07375"
     CDS             <1..171
                     /locus_tag="VFM52_07375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007804752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(37)-N1)-methyltransferase TrmD"
                     /protein_id="HET8765027.1"
                     /translation="VLLSGDHAAIRRWRLKQALGRTWLRRPDLLAQRVLDVESRTLLE
                     EFRREYRAAGGS"
     gene            307..705
                     /gene="rplS"
                     /locus_tag="VFM52_07380"
     CDS             307..705
                     /gene="rplS"
                     /locus_tag="VFM52_07380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007804753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L19"
                     /protein_id="HET8765028.1"
                     /translation="MNKIIEQFEAEQITRPLPEFGAGDTVVVNVKVKEGSRERVQAFE
                     GIVIAKRNRGLHSAFTVRKMSHGTGVERVFQAHSPAIDSIQVKRKGKVRAAKLYYLRG
                     LEGKAARIKEDIAGAAAAKAAHKAAAQAAE"
     gene            complement(785..>2768)
                     /locus_tag="VFM52_07385"
     CDS             complement(785..>2768)
                     /locus_tag="VFM52_07385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008434454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HET8765029.1"
                     /translation="QIISLLRNTGIAVRPARAIDHAQVQAALEDLEPDLVLFDPANGG
                     IALPEVVKLLDATGRDYSLLGLVGTLDNQTAAELFEQGVHGVAVRSLPGQLLAVARRE
                     FDALQTRRTVRRLEAVQHELERRCEVLLDSSRDAIAYVHEGVHVRANQAYLDAFGYAD
                     FDDLLGMTILDMIDPADVDAFKAQLRGQDRQEKLPNPLSLRARRADGSTFDATVDFTQ
                     ATFEGEPCLQLVFREQSVAPVVLEQLQRDQVTGLYTRARLIERIEDAVHAAAAGTKGH
                     SLLLVVPDNWPTIAANVGLGKADELVAGLADRIRPLLGEDDDAGVLAEHTFGILLSPR
                     PDDAIRDWMTRLRQAVSSTIFDAGNRSISVTVSIGGCLMGEKNANTDLLLDQASRALR
                     AAVDQGGNTMELHDPSAREKADAQRELAWLDLVKKALAENSLLLYHQQTVSLQDAEGD
                     YSEILLRMNGPQGEVMPGVFLPIADKHGLSTPIDRWVLGHAFDALRRRDRQGATTTFF
                     VKLTRASLQDATLLPWLAEQLQRAALKRGHLVLEMTESKVMTLLRPAQEFVTAWKKLG
                     GLFALEQFGSGLNSFQLLGHVDADFLKLDRSYMADLPRHPENQKKIAELCAQAHELKK
                     QVIAEWVEDATSTSLLFAAGVDFVQGHFLQVPQRLD"
BASE COUNT          452 a          880 c          966 g          470 t
ORIGIN      
        1 gtgctgttgt cgggcgatca cgcggcgatt cgccgctggc gcctgaagca ggcactgggg
       61 cgaacctggc tgcgccggcc ggacttgttg gcgcagcgtg tgctcgacgt tgaatcgcgc
      121 acgctgctgg aagaattccg tcgcgaatac cgcgcggcgg gtggaagttg aagagtgcgg
      181 acatggatgg ccgctgtttg atcttcgcga tcaggatgat cgcaattaac caatgacaac
      241 tgcggccagg aagcgtcgct aacagaacta ccgcggcacg gatcgccgca aaccactgag
      301 gtcgccatga acaagatcat cgaacagttc gaagccgagc agatcacccg ccccttgccg
      361 gagttcggcg ctggcgacac cgtggtggtg aacgtcaagg tgaaggaagg cagccgtgag
      421 cgcgtgcagg cgttcgaggg catcgtcatc gccaagcgca accgtggcct gcattcggcg
      481 ttcaccgtgc gcaagatgtc gcatggtacc ggcgtggagc gcgtgttcca ggcgcacagc
      541 ccggccatcg attcgatcca ggtgaagcgc aagggcaagg tgcgcgcagc gaagctgtat
      601 tacctgcgcg gcctcgaagg caaggcggcg cgcatcaagg aagacattgc aggcgccgcc
      661 gccgcgaagg ccgcgcacaa ggcggctgcg caggccgctg aataagcgca cttccccggc
      721 ggcatgaaaa gcccgcggat cgctccgcgg gctttttcgt tccagccgcg gtgaaggccc
      781 gggctcaatc cagccgctgc ggcacctgca ggaagtggcc ctgcacgaag tccacgccgg
      841 ccgcgaacag cagcgaggtg ctggtggcgt cctcgaccca ttcggcgatc acctgcttct
      901 tgagctcgtg ggcctgggca cacagctcgg caatcttttt ctggttttcc ggatggcgtg
      961 gcaggtcggc catgtagctg cggtcgagct tgaggaaatc cgcgtcgacg tggccgagca
     1021 actggaagga gttcagcccc gagccgaact gctccagcgc aaacaggccg cccagctttt
     1081 tccacgcggt gacgaattcc tgggccgggc gcagcaaggt catcaccttg ctttcggtca
     1141 tttccagcac gaggtggccg cgcttcaggg ctgctcgttg cagctgttcg gccagccatg
     1201 gcagcagtgt cgcatcctgc aacgaagccc gggtgagctt gacgaagaac gtcgtggttg
     1261 ccccctggcg atcgcggcga cgcagggcgt cgaatgcgtg gccgagcacc cagcggtcga
     1321 tgggtgtgct caggccatgc ttgtcggcga taggcaggaa cacgcccggc atgacctcgc
     1381 cttgcggacc attcatgcgc agcaggatct cggagtagtc gccctcggcg tcctgcaggc
     1441 tcacggtctg ctggtggtag agcagcaggc tgttttcggc cagtgccttc ttgaccaggt
     1501 ccagccaggc cagctcgcgc tgggcgtcgg ccttctcgcg ggcagaagga tcgtgcagct
     1561 ccatcgtgtt gccgccctgg tcgacggcgg cgcgcagtgc gcggctggcc tggtcgagca
     1621 acaggtcggt gttggcgttc ttctcgccca tcaggcagcc gccgatgctg acggtgacgc
     1681 tgatcgaacg gttgccggcg tcgaagatgg tgctgcttac cgcttgccgc agccgcgtca
     1741 tccagtcgcg gatggcgtcg tccgggcgtg gcgacagcag gatgccgaac gtgtgctcgg
     1801 cgagcacgcc ggcgtcgtcg tcttcgccga gcagcggacg gatgcggtcg gccaggccgg
     1861 ccaccagttc gtcggccttg cccagcccga cgttggcggc gatcgtgggc cagttgtcgg
     1921 gtaccaccag cagcagcgaa tggcccttgg tgccggcggc cgcggcgtgc accgcgtcct
     1981 cgatgcgctc gatcaggcgg gcgcgggtgt acaggccggt gacctggtcg cgctgcagct
     2041 gttcaagcac aaccggcgcg accgactgct cgcggaacac gagctgcagg cagggctcgc
     2101 cctcgaacgt ggcctgggtg aaatcgaccg tggcgtcgaa cgtgctgcca tcggcgcggc
     2161 gtgcgcgcag gctcagcggg ttgggcagct tctcctgcct gtcctggccg cggagctggg
     2221 ccttgaaggc gtcgacgtcg gccgggtcga tcatgtcgag gatggtcatg ccgagcagat
     2281 cgtcgaagtc ggcgtagcca aaggcatcga gataggcctg gttggcgcgc acgtgcacgc
     2341 cctcgtgcac ataggcgatg gcgtcgcgcg aggaatcgag cagcacctcg cagcggcgct
     2401 cgagttcgtg ctgcacggcc tcgagccggc gtaccgtgcg ccgggtctgc agcgcgtcga
     2461 attcgcgcct ggccaccgcc agcagctgcc ccggcaggct gcggaccgca acgccgtgca
     2521 cgccctgctc gaagagctcc gcggcggtct ggttgtccag cgtgccgacc aggccgagca
     2581 gggagtagtc gcgtccggtc gcgtccagca gcttcaccac ctccggcaac gcgatcccgc
     2641 cgttggccgg gtcgaacaac accagatccg gttcgagatc ctccagtgcc gcctgcacct
     2701 gagcgtggtc gatggcgcgc gccgggcgca ccgcgatacc ggtgttgcgt aacaggctga
     2761 tgatctgc
//
LOCUS       DASSVL010000421         2194 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1394107,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000421 DASSVL010000000
VERSION     DASSVL010000421.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2194)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2194)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2194
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1394107"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..392)
                     /gene="pgsA"
                     /locus_tag="VFM52_07390"
     CDS             complement(<1..392)
                     /gene="pgsA"
                     /locus_tag="VFM52_07390"
                     /EC_number="2.7.8.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010894757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008444 -
                     CDP-diacylglycerol-glycerol-3-phosphate
                     3-phosphatidyltransferase activity [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--glycerol-3-phosphate
                     3-phosphatidyltransferase"
                     /protein_id="HET8765030.1"
                     /translation="MKLTVPTLLTLLRIALIPVLAVVFYLPYGWTNFATAAVFVAASL
                     TDWLDGWIARRYAQYSDFGAFLDPVADKLMVSTALFLIVQGHPTAWMALWAAVIVGRE
                     IAVSALREWMAELGQRRKVAVAALGKFKT"
     gene            complement(455..2194)
                     /gene="uvrC"
                     /locus_tag="VFM52_07395"
                     /pseudo
     CDS             complement(455..2194)
                     /gene="uvrC"
                     /locus_tag="VFM52_07395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017156622.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_component: GO:0009380 - excinuclease repair complex
                     [Evidence IEA];
                     GO_function: GO:0009381 - excinuclease ABC activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrC"
BASE COUNT          300 a          752 c          809 g          333 t
ORIGIN      
        1 gtcttgaact tgcccagcgc cgccaccgcc accttgcggc gctggccgag ctcggccatc
       61 cactcgcgca gcgccgacac cgcgatctcg cggcccacga tgaccgccgc ccacagcgcc
      121 atccacgcgg tcgggtggcc ctgcacgatg aggaacagcg ccgtcgacac catcagcttg
      181 tcggccaccg ggtcgagaaa ggcgccgaag tccgaatact gggcgtagcg ccgcgcgatc
      241 cagccgtcga gccagtcggt gagcgaggcc gcgacgaaca ccgccgcggt cgcgaaattg
      301 gtccagccgt acggcaggta gaacacgacc gcaagcaccg ggatcagcgc gatgcgcagc
      361 agcgtgagca gggtcggcac cgtgagcttc atgcgtcgtt ccccgagggg tcgttccttg
      421 gcgtggctgg cgtggcaggt gttgcgggcg cagcgggcgt ggcaggcgcg gcatcgggct
      481 gcggcatgcc gtggaggctg gcccagatgc gttcggcgag cgggagattg atgccctcca
      541 cccgcgcgat ctcctccgcg cccgccgccc tgagcccgcc caggccgccg aaatgccgca
      601 acaggttagc gcgacggcgc ggtccgatgc cgggaatgtc ttccaggcgg ctggtattgc
      661 gggccttggc gcgacggccg cgatggccgg tgatggcgaa acggtgcgat tcgtcgcgca
      721 cctgctgcac cagctgcagg ccgggggagt ccgggcctgg gcggatctcg cggccgtccg
      781 ggagcagcaa cgcctcgtgg ccggcgcggc gggcctcgcc cttggccacg ccgacgacgg
      841 gcacgcgctc ggcgatgccc aggtccgcca gcacggcgtt ggcctgcgcg acctggccgg
      901 cgccgccgtc gatcagcagc aggtccggca gcacgccgcc ctcgtccacc gcgcggcgga
      961 agcggcgctc cagcgcctgg cgcatcgcgg cgtagtcgtc gcccggctcg atgccggtga
     1021 tgttgtagcg gcggtactgg ccgcggaccg ggcccttctc gtcgaacacc acctgcgagg
     1081 ccaccgtggc ttcgcccatg gtgtggctga tgtcgtagca ctcgatgcgg tgcggcggtt
     1141 cctgcaggcc gagcagctgc tgcagcgact cgacgcgcgc gcgctgggtg gcctggctgc
     1201 ccagctcggc ggcgagcgcg agctcggcgt tgcgcttcgc caggtccagg tagccggcgc
     1261 ggtcgccgcg cacgttgcac ttgagctgca cgcgcttgcc ggcggcttcg cccagcgcct
     1321 gctgcagcag ctcgcggtcg tcgatgtcgc ggtcgaggac gatttccggc ggcgcgggct
     1381 gctcggcgta gtactgcgag acgaacgcgc tgaggatctc ctcgcagttc tcggcgccgt
     1441 tggtcttcgg gaagaaggcg cgcgtgccga ggttgcggcc gtcgcggaag gcgagcagca
     1501 gcacgcaggc ggcggagccc tccatcgcgc acgccagcac gtcgaggtcg gcggcgcggc
     1561 cttcgatgta ctggcgcgcc tgcagcttgc ggatcgtggc gatgaggtcg cggatgcggg
     1621 cggcctcctc gaagtcgagg gcgtcgctgg cggcggccat cgcgctttcc agttcgccgg
     1681 aaagctcgtc gctgcggccg tcgaggaaca tcgccacgcg gcgcaccgat tccgcgtagg
     1741 cgtccggctc gaccaggccc acgcagggcg cgctgcagcg gccgatctgg tactgcaggc
     1801 acggccgcga gcggttgcgg aacacgctgt cctcgcagct gcgcagcttg aacagcttgt
     1861 gcagcaggtt gagcgtgtcg cgcaccgcgc cgacgctcgc atacgggccg aaatagcggc
     1921 cgggaatggc gcgcgggccg cggtgcatgg ccaggcgcgg ccagtcctcg ctcgtgagca
     1981 gcacgtacgg gtagctcttg tcgtcgcgaa gcagcacgtt gtagcgcggc ttgagcgact
     2041 tgatcagctc gttctcgagg atcagcgcct cggcctcggt gcgcgtcacc gtgacctcga
     2101 tgcgcgcgat ctgcgagacc atcgaggcga tgcgcgcgga cttcggcgtg ttgttgaaat
     2161 agctggagac gcggttcttc aacgcgctcg cctt
//
LOCUS       DASSVL010000422         2691 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_292458, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000422 DASSVL010000000
VERSION     DASSVL010000422.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2691)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2691)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2691
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_292458"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..400)
                     /locus_tag="VFM52_07400"
     CDS             complement(<1..400)
                     /locus_tag="VFM52_07400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019463865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HET8765031.1"
                     /translation="MRVTIADDEPLARMRLAALLRECGDVELVASVGDGEAALAALAT
                     TPADVLLLDINMPGLDGLDLAQRLAGQARPQVVFCTAYENHALRAFELAAVDYLLKPV
                     RLERLREALQRARQRLAEAPHAPTVWLYARV"
     gene            complement(403..1443)
                     /locus_tag="VFM52_07405"
     CDS             complement(403..1443)
                     /locus_tag="VFM52_07405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007810291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase"
                     /protein_id="HET8765032.1"
                     /translation="MRLFRPPDEPSPLPDFCSLPVLFTLLVTGALAATVVWLAAGDHR
                     DLSGYSVGILFVAWLALLIDVALCLLRPFLQRLPGHWSYLAAWVLLMPIVGAASWVAH
                     GVDAALSMGLLDETPPAFVRDNVLIAALLGAALLRYFYVAAQWRLRLAAVSRAQVEAL
                     QARIRPHFLFNSMNTVAALIPVDPAAAEHTVEDLAELFRAALGADKQGDGTLGEELAL
                     LDRYLAIEQLRLGERLRVERDVDALPADFPLPRLLLQPLVENAVHHGIQPLREGGAVG
                     LHGRREAGGIVIEITNPLPSTPARAGSGHGLDNVRRRVAFRYGPRAQMHAGASGDRFV
                     VTLRLPFAEIRR"
     gene            complement(1510..2193)
                     /locus_tag="VFM52_07410"
     CDS             complement(1510..2193)
                     /locus_tag="VFM52_07410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008213570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxylesterase"
                     /protein_id="HET8765033.1"
                     /translation="MSELLPVVEHETAANPRYSVIWLHGLGADGHDFAPIVPALVAPD
                     WPAIRFVFPHAPVRPVTVNGGVPMRAWYDILAFDLDARQDEAGIRASVAAVGALIARE
                     NERGVPDARIFLAGFSQGGAIAYSTALRHPHRLAGLIALSTYVPLAATLAAERSAANA
                     AIPIFQGHGTLDPVVVPARGDASRTLLEGLGYRVDAHRYPMAHAVCAEEIADLRAWLA
                     GKLGNGHEE"
     gene            complement(2210..>2691)
                     /locus_tag="VFM52_07415"
     CDS             complement(2210..>2691)
                     /locus_tag="VFM52_07415"
                     /inference="COORDINATES: protein motif:HMM:TIGR01352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0031992 - energy transducer activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HET8765034.1"
                     /translation="QGQYNLRVSFAGNGPRLDRQRVKPFYPVDAIRARQAAFVYLDVT
                     VQPDGRLADAKVTSQFEHWPVMPSFRKSVLALAEQWRAVPEQVNGHAVATHLRVPISF
                     YVDPPMFTRQQLQMLRERASAEHAANDAPGIPLPSQQEVALDSPLQPRAVAAIVGAP"
BASE COUNT          414 a          951 c          977 g          349 t
ORIGIN      
        1 gcacccgcgc atacagccac acggtgggcg cgtgcggcgc ttcggccagg cgctggcgcg
       61 cgcgctgcag cgcctcgcgc aggcgttcga ggcgcaccgg cttcagcagg taatccaccg
      121 cggccagctc gaacgcgcgc agcgcatggt tttcgtacgc ggtgcagaac acgacctgcg
      181 ggcgcgcctg cccggcgagg cgctgcgcga ggtccaggcc gtccagcccc ggcatgttga
      241 tgtcgagcag cagcacgtcc gccggggtcg tcgccagcgc ggccagtgcc gcctcgccgt
      301 cgccgacgct ggcgaccagt tcgacatcgc cgcactcgcg cagcagcgcg gccaggcgca
      361 tgcgcgccag gggctcgtcg tcggcgatcg tcacccgcag gctcatcgac ggatctccgc
      421 gaacggcagc cgcagcgtca ccacgaagcg gtcgccgctg gcgccggcgt gcatctgcgc
      481 gcgcgggccg tagcggaacg cgacccgccg ccgcacgttg tccagcccgt ggccgctgcc
      541 ggcgcgggcc ggcgtggacg gcagcgggtt ggtgatctcg atgacgatac cgccggcctc
      601 gcggcggccg tgcaggccga cggcgccgcc ctcgcgcaac ggctggatgc cgtggtgcac
      661 ggcgttttcg accagcggct gcagcagcag gcgcggcagc gggaaatccg ccggcagcgc
      721 gtcgacgtcg cgctcgacgc gcaggcgctc gccaagccgc aactgctcga tggcgaggta
      781 gcggtcgagc agcgccagct cctcgccgag cgtgccatcc ccctgcttgt cggcacccag
      841 cgccgcgcgg aacagctcgg ccaggtcttc gacggtgtgt tcggcggcgg ccgggtcgac
      901 cgggatcaac gccgccacgg tattcatgct gttgaacagg aagtgcgggc ggatgcgcgc
      961 ctgcaatgcc tcgacctgcg cgcggctgac cgcggccagc cgcaggcgcc actgcgcggc
     1021 cacgtagaaa tagcgcagca gcgccgcgcc gagcagcgcc gcgatcagca cgttgtcgcg
     1081 cacgaaggcg ggcggcgttt cgtccagcag gcccatgctc aaggcggcgt cgacaccatg
     1141 cgccacccag ctcgcggcgc cgacgatcgg catcagcagg acccacgccg ccaggtacga
     1201 ccaatgtccc ggcaggcgct gcaggaacgg gcgcagcagg cacagcgcca cgtcgatcag
     1261 cagcgccagc cacgccacga acaggatgcc gacgctgtag ccggacaggt cgcgatggtc
     1321 gcccgccgca agccacacca cggtcgccgc cagcgcgccg gtgaccagca gggtgaacag
     1381 caccggcagg ctgcagaagt cgggcagcgg actgggttca tcgggcgggc ggaacaggcg
     1441 catggcggaa gtatggcttg gagccgggaa tgggggagcc gggtcgcgcg acatcgcggt
     1501 gccgctttcc tattcctcgt gcccgttgcc caactttccg gccagccacg cgcgcaggtc
     1561 ggcgatctcc tccgcgcaca ccgcgtgcgc cattggataa cgatgcgcgt cgacgcggta
     1621 gccgaggcct tcgagcagcg tgcggctcgc gtcgccgcgc gccggcacca cgaccgggtc
     1681 gagcgtgccg tgcccctgga agatgggaat cgcggcattc gctgcgctgc gttcggcggc
     1741 gagggtcgcg gcaagcggca cataggtgga cagcgcaatc agcccggcaa gccggtgcgg
     1801 atggcgcagc gcggtcgagt acgcgatcgc gccgccctgc gagaaaccgg cgaggaagat
     1861 gcgcgcatcc ggtacgccac gctcgttctc gcgggcgatc aaggccccga cggcggcgac
     1921 cgaggcgcgg atgccggcct cgtcctgccg cgcgtccagg tcgaaggcga ggatgtcgta
     1981 ccacgcacgc atcggcacgc cgccgttcac cgtcaccggc cgcaccggcg cgtgcggaaa
     2041 cacgaagcgg atcgcgggcc agtccggcgc gaccaacgcc ggcacgatcg gcgcaaaatc
     2101 atgtccgtcg gcgccgagcc cgtgcagcca gatgacgctg tagcgcgggt tcgcggcagt
     2161 ctcgtgttcg acgacgggga gcagttcgga catggggcat tccggccaat cagggagccc
     2221 cgacgatggc ggcaaccgcc cgcggttgca acgggctgtc cagcgccact tcctgttgcg
     2281 acggcagcgg gatgcccggt gcgtcgttcg cggcatgctc cgcgctcgcg cgttcgcgca
     2341 gcatctggag ttgctgccgc gtgaacatgg gcgggtcgac gtagaagctg atcggcacgc
     2401 gcaggtgcgt ggccaccgca tggccgttca cctgctcggg cacggcgcgc cattgttccg
     2461 ccagcgccag cacggatttt cgaaacgacg gcatgaccgg ccagtgctcg aactggctgg
     2521 tgaccttggc gtcggcaagg cggccgtcgg gctgcacggt gacatcgagg tacacgaacg
     2581 cggcctggcg cgcgcggatg gcgtcgacgg gataaaacgg cttcacccgc tgccgatcca
     2641 ggcgcggccc gttgcccgcg aagctgacgc gcaggttgta ttgcccctgg g
//
LOCUS       DASSVL010000423         6990 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_744213, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000423 DASSVL010000000
VERSION     DASSVL010000423.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 6990)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6990)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6990
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_744213"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2362)
                     /gene="gspD"
                     /locus_tag="VFM52_07420"
     CDS             complement(<1..2362)
                     /gene="gspD"
                     /locus_tag="VFM52_07420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007513478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015627 - type II protein secretion
                     system complex [Evidence IEA];
                     GO_process: GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system secretin GspD"
                     /protein_id="HET8765035.1"
                     /translation="MYKKLATLGIICTAGVLAGCTPQLRPSNDYSLQREAIAGTHKPV
                     PQPLDVGTGQQNQALANAEAPQQQYGTGVFINAAAAHGKSGGAANAGGTITFNFDNQP
                     VQAAVKAILGDVLHANYSIAPDVKGTVTFATSQPVTESEVLPILQMLLSWTGNALVRQ
                     GGRYLVMPIDQAAAGNLVPGLGAVSPGAGYAARLFPLHYVSAEAMQKLLKPFADPKAF
                     LLVDPLRNILVMGGTPDELANYQRIVRTFDVDWLRGMSVAVIPLEHVQAAELVGQLET
                     IFSEQGGGKDETQQKVPGSNVTVTFANSGSTAAGSLSSMVRLIPLKQSNSLVVITSQP
                     SYIDEVRRLVTTIDNGAGNASGLYVYNVLNVKASDLAKHLNELFGNNSNGNYQNQAGA
                     VAPGFSPLEQTGQGRLGAQQGFGSFAQDSTFGGTDNGSGDLFGGSGSGSDSSMVFGST
                     QSRRQQQGNQGSVAFTTSEGVRIAAVNENNQLLIRATPSAWQKLLPVIQRLDEKPLQV
                     QIETKVLEVNLTGEFQFGVQYYLGGLIGTQPGSPPNTNESYHRHQGAAGLGGVQYATS
                     DALFYSFAGNKLQFALSALETSGDAKVLSAPSTVVLNNQETTFKVGEKIPIVQTYLVP
                     GVGSTATNYNAGQVQYIDTGVLLDVVPRVSPGGLVYLDVQQVVSKPSATTDKNGNYTI
                     SNRALSTEVAVQSGQTVLLGGLIQQTDSVQDNGVPFLNRIPVLGRLFGTTDRNRSRTE
                     LIVLITPRIIRNPEEARQNTDEYESQFESLKPILPGGSASTAPAAGD"
     gene            complement(2416..3114)
                     /locus_tag="VFM52_07425"
     CDS             complement(2416..3114)
                     /locus_tag="VFM52_07425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8765036.1"
                     /translation="MNAADRRRLTPSLGILAAALLLVLIALWLGFGRGAHWRDKATPP
                     KLPPPGTNLPAPAVPPLDQYAAVWQHPLFNPSRAPEAAAGNGDEATGDLQLTGVIMLP
                     DLKMAILHDRTNNRDYRIIEGQPSRGGPVLVELHPRSAVVDTSGSRVNLQLIPGPAPG
                     TSAPAQDGAEPQQSAGQGASAMVSRQAQGDSGRQVPMAGPGGQASVEARARQLRARIE
                     AARRRAARQHDGGG"
     gene            complement(3111..3698)
                     /gene="gspM"
                     /locus_tag="VFM52_07430"
     CDS             complement(3111..3698)
                     /gene="gspM"
                     /locus_tag="VFM52_07430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008436989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein GspM"
                     /protein_id="HET8765037.1"
                     /translation="MRIDAKRMTPMQSRLAAIVLALLALAVAYFLLLHWWFVAPLVSV
                     DGQMHDLQSIHAKYAAAIAEQPLLRRRVAELERGGASVNAFLSATDPSTASADLIQRA
                     TDVVAAHEHEGAGCSMPSKMPIEQDSGNEPFRRVSVSITLDCGMQPLAAVLHDFDRGL
                     PYLFVDNLTVARSPTGRMQAQLSLSGYLRPSSPSP"
     gene            complement(3688..4815)
                     /locus_tag="VFM52_07435"
     CDS             complement(3688..4815)
                     /locus_tag="VFM52_07435"
                     /inference="COORDINATES: protein motif:HMM:NF016992.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilN domain-containing protein"
                     /protein_id="HET8765038.1"
                     /translation="MATASAPSIERMKLAWSRSAGPGFLRWWGGELAALLPARIRAWL
                     QRGPDVLRLTMDADALLVKRARTGGVLATIPAELPVEAQRAAFASACVGIDPDDRRLV
                     LVVAGTSVLQRRLLMPLAAAADPRKVVGYELDRQTPFKPDQLYYDVRVGPVPAPAGQV
                     ALDLYAAPRAELDPMLERLAAMGVYPDCVDVQAAGGALAGVDLLPAGRRPRRLDKRRR
                     LNWLLAAGCVLLAVLVLAQWLGNRRAALAKMQDEVDAMRAQATQSEQLRAQLTAATAA
                     SQFLVKRKAENPPPLAVLDELTRRMPATAWLDAMTLDDSGGLDIKGEADKAAALVDKL
                     GGSKVFGEPKLQGVIQPDPATGKERFELTARVREQAPADAH"
     gene            complement(4829..5689)
                     /locus_tag="VFM52_07440"
     CDS             complement(4829..5689)
                     /locus_tag="VFM52_07440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8765039.1"
                     /translation="MILRKRKRERGTALLLVLWATVLLAALLAGVAAASRSHGQAALY
                     GAEHARAELAAEAGLAQAVAGLRAPDQQHQWVPDGRPYTFTFDGAKVTVRVVDVSGMA
                     DLNAAPATLLRGIFQAAGADALRAGQLADAVVTTRGGVSGKPGQPFRAIDQLARLQGM
                     DLALFGKVENTVTVYSGRNFPDASYAGALVLASLRGVDAAQAGALVDARRKRAAQRGA
                     GNGQAFGAVANGPLVAGYGGVVERVFSVAEMPDGNRAGLDVTIRLALTGTQARPYKVL
                     DWRSGFTSAP"
     gene            complement(5875..6333)
                     /locus_tag="VFM52_07445"
     CDS             complement(5875..6333)
                     /locus_tag="VFM52_07445"
                     /inference="COORDINATES: protein motif:HMM:TIGR02532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HET8765040.1"
                     /translation="MKRAIRQHGFTLLEILLALALLAFVMLGVWGAMRGAAHVTRSAD
                     AVMAQGESVRTVQQFLRRYIGAAEPQPFTMTDGSAARMFRGDAASMEYVAPLPMQSGH
                     AGLYIQAVSLQKEGAGMALRLSYQPYTEQPSANGQPVEHVLLTDLRGGHF"
     gene            complement(6330..6773)
                     /locus_tag="VFM52_07450"
     CDS             complement(6330..6773)
                     /locus_tag="VFM52_07450"
                     /inference="COORDINATES: protein motif:HMM:NF019575.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HET8765041.1"
                     /translation="MSERPRGFTLIEVLAAIALLAIAFAIGLGALGKSAQNAARAVAL
                     DAAVEHAQSLFAEQGMVAPLKDESTEGTFDDGMRWTLKVHALPRSAQRAGAAAVALQQ
                     GGVMMAQAAAIELWQLDATVQYGAGRVLRLSTQRAQAAPARDADE"
     gene            complement(6770..>6990)
                     /locus_tag="VFM52_07455"
     CDS             complement(6770..>6990)
                     /locus_tag="VFM52_07455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019463878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="type II secretion system protein GspH"
                     /protein_id="HET8765042.1"
                     /translation="PGRDPRDLPADATVRVESAAEAGRQPGLARIGYFPDGSSSGGNV
                     TLSEDRRSARVDVDWLTGAVTVSSGAPR"
BASE COUNT         1066 a         2466 c         2323 g         1135 t
ORIGIN      
        1 catcgcctgc agccggagcg gtgctggcac tgcctcccgg caggatcggt ttcagcgatt
       61 cgaactggct ttcgtattca tcggtgttct ggcgcgcttc ctcggggttg cggatgatgc
      121 gcggcgtgat cagcacgatc agctcggtgc gcgaccggtt gcgatcggtg gtaccgaaca
      181 gccggccgag caccggaatg cggttgagga acgggacgcc gttgtcctgg acgctgtcgg
      241 tctgctggat caggccgccc agcaacaccg tctgcccgct ctgcaccgcg acttcggtcg
      301 agagcgcacg gttggaaatg gtgtagttgc cgttcttgtc ggtggtggcg gaaggcttgc
      361 tgacgacctg ttgcacgtcc aggtacacca gcccacccgg gctcacgcgt ggcaccacgt
      421 ccagcagcac gccggtgtcg atgtattgca cctggcccgc gttgtaattc gtggcggtgg
      481 acccgacgcc cggcaccagg taggtctgca cgatcggaat cttctcgcca accttgaacg
      541 tggtttcctg gttgttgagc acgaccgtcg agggcgccga caggaccttg gcatcgccgc
      601 tggtctccag cgcgctcagc gcgaactgca gcttgttgcc ggcgaacgaa tagaacaacg
      661 catccgacgt cgcatactgc acgccgccca ggcccgcggc accctgatgg cggtggtacg
      721 actcgttggt gttgggcggc gaaccgggct gcgtgccgat caggccgccg aggtaatact
      781 gcacgccgaa ctggaattca ccggtcaggt tgacttccag caccttggtt tcgatctgta
      841 cctgcagcgg cttctcgtcg aggcgctgga tcaccggcag cagcttctgc cacgcgctcg
      901 gcgtcgcccg gatcagcaat tggttgtttt cgttgactgc cgcgatgcgc acgccttcac
      961 tggtcgtgaa ggcgacgctg ccctggttgc cctgctgctg gcggcggctc tgggtggaac
     1021 cgaaaaccat gctgctgtcg ctgccgcttc cgctgccgcc gaacaggtca ccgctgccgt
     1081 tgtcggtacc cccgaaggtg ctgtcctgcg cgaacgagcc gaacccctgc tgtgcgccga
     1141 gccggccctg gcccgtctgt tccagcggcg agaatccggg cgccaccgcc ccggcctggt
     1201 tctggtagtt gccgttgctg ttgttgccga acaattcgtt gaggtgcttg gcgaggtccg
     1261 aggccttcac attgagcacg ttgtagacgt acagccccga tgcattgccg gcgccgttgt
     1321 cgatggtcgt gaccaggcgg cgcacttcgt cgatgtagga cggttgcgag gtgatcacca
     1381 ccagcgaatt gctctgcttg agcgggatca ggcggaccat gctggacagg ctgcccgcgg
     1441 ccgttgaacc ggaattggcg aaggtcaccg tgacgttgct gccaggaacc ttctgctggg
     1501 tttcgtcctt cccgccgccc tgctcgctga aaatcgtttc cagttggccg accagttccg
     1561 cggcctgcac gtgttccagc gggatgaccg ccaccgacat cccgcgcagc caatccacgt
     1621 cgaaggtgcg cacgatgcgc tggtagttgg cgagttcgtc aggcgtgccg cccatcacca
     1681 ggatgttgcg cagcggatcg accagcagga acgccttggg atccgcgaac ggcttcagca
     1741 gtttctgcat cgcctcggcg gacacgtaat gcagcgggaa caggcgcgcc gcataacccg
     1801 caccgggcga caccgcgccc agccccggca ccaggttgcc ggccgccgcc tggtcgatcg
     1861 gcatcacgag gtaacgtccg ccctgccgga ccagggcatt gccggtccac gacagcagca
     1921 tctgcaggat cggcagcacc tcgctctcgg tgaccggctg cgaggttgca aacgtcaccg
     1981 tgcccttgac gtcgggcgcg atcgaataat tggcgtgcag cacgtcgccg aggatggcct
     2041 tgacggccgc ctgtaccggc tggttgtcga agttgaaggt gatggtgccg cccgcgttcg
     2101 cggcgccacc ggattttccg tgcgcggcgg ccgcgttgat gaatacgccg gtgccgtact
     2161 gttgctgtgg cgcctcggcg ttcgcgagcg cctggttctg ctggccggtg ccgacgtcga
     2221 gcggctgggg caccggcttg tgggtgccgg cgatcgcctc gcgctgcagg ctgtagtcat
     2281 tgctcgggcg aagctgcggc gtgcaaccgg ccaatacccc ggcggtacaa atgatgccca
     2341 gcgtagccag cttcttgtac acgtcgtgct ctccagacga tcgaaccgca tgaaaccggt
     2401 cacgccggct ttgaatcaac cgccaccatc gtgctggcgt gccgcacggc gccgcgccgc
     2461 ttcgatgcgc gccctcagtt gccgggcgcg cgcttcgacg gacgcctggc cgccgggccc
     2521 ggccatgggc acctggcgcc ccgaatcgcc ttgcgcttgg cgcgagacca tagcagatgc
     2581 gccctgcccc gcgctttgct gcggctccgc gccgtcctgc gcgggggcgc tggtgccggg
     2641 cgccgggccg gggatcagct gcaggttcac ccgggaaccc gaggtatcca ccactgcgct
     2701 gcgcgggtgc aattcgacca gcacggggcc gccgcgggat ggctgccctt cgatgatgcg
     2761 gtaatccctg ttgttggtcc tgtcgtgcag gatcgccatc ttcaggtcgg gcagcatgat
     2821 cacgccggtc aactgcaggt cgccggtggc ctcgtcgccg ttgccggccg cggcttcggg
     2881 cgcgcgcgaa gggttgaaca acgggtgctg ccagaccgcg gcgtactggt ccaggggcgg
     2941 cacggcaggc gccggcaggt tggttccggg cggcggcaat ttcggcggcg tggccttgtc
     3001 tcgccagtgc gcgccacgtc cgaaacccag ccaaagcgcg atcaggacca gcagcagcgc
     3061 cgcggccagg atgcccagcg acggcgtaag gcggcggcgg tcggcggcgt tcatggcgac
     3121 ggactcgacg ggcgcaggta acccgacagc gaaagctgcg cctgcatgcg gcccgtgggc
     3181 gagcgggcga cggtcaggtt gtccacgaac aggtacggca acccgcggtc gaaatcatgc
     3241 agcaccgcgg ccagcggttg catgccgcaa tcgagcgtga tgctgacgct cacgcggcgg
     3301 aacggttcgt tgccgctgtc ctgctcgatc ggcatcttgg aaggcatgct gcaacccgcg
     3361 ccctcgtgtt cgtgcgcagc caccacgtcg gtggcgcgct ggatcaggtc ggccgaagcg
     3421 gtgctgggat cggtggcaga gagaaatgcg ttgacggagg caccgccgcg ttccagttcc
     3481 gcgacacgcc tgcgcagcag cggctgctcg gcgatcgccg cggcgtactt cgcgtggatc
     3541 gattgcaggt cgtgcatctg gccgtccacg ctcaccagcg gcgccacgaa ccaccagtgc
     3601 agcagcagga aatacgcgac cgccagcgcc agcaacgcca gcacgatcgc ggcgaggcgc
     3661 gattgcatcg gcgtcatgcg cttggcgtca atgcgcatcg gcgggggcct gttccctgac
     3721 gcgcgccgtc agctcgaagc gttccttgcc ggtggcgggg tcgggctgga tcacgccctg
     3781 cagcttgggt tcgccgaaca ccttcgaacc gcccagcttg tcgaccagcg ccgcggcctt
     3841 gtcggcttcg cccttgatgt cgaggccacc ggaatcgtcc agcgtcatcg cgtccagcca
     3901 agccgtcgcc ggcatgcgcc gggtcagttc gtcgaggacc gcgagcggcg gtggattctc
     3961 ggccttgcgc ttcaccagaa attgcgaagc ggcggtcgcc gccgtcaatt gcgcgcgcaa
     4021 ctgttcggat tgggtcgcct gggcgcgcat cgcgtccacc tcgtcctgca tcttcgccaa
     4081 cgccgcgcgg cgattgccca gccactgcgc cagcaccagc accgccagca ggacgcagcc
     4141 cgcggcgagc agccagttca ggcgccgccg cttgtccagc ctgcgcgggc ggcgtcccgc
     4201 cggcagcaaa tccacgcccg cgagcgcgcc tccggctgcc tgcacgtcca cgcaatcggg
     4261 gtagacgccc atcgccgcca gacgttcgag catcggatcg agctcggccc gcggcgcggc
     4321 gtacaagtcc agggccacct gacccgcggg cgccggcacc gggccgacgc gtacgtcgta
     4381 ataaagctgg tcgggtttga acggcgtctg ccggtcgagt tcgtaaccga cgaccttgcg
     4441 cggatcggcc gcggcggcca gaggcatcag caggcgccgc tgcagcaccg aggttcccgc
     4501 caccaccagc accaggcggc gatcatccgg atcgatcccc acgcacgcgc tcgcgaaggc
     4561 cgcgcgctgg gcttcgacgg ggagctcggc cggaatcgtg gccaacacgc cgcccgtgcg
     4621 tgcgcgcttc acgagcaacg cgtccgcatc catcgtcaaa cgcagcacat cgggaccacg
     4681 ttgcagccac gcgcggatgc gcgccggcag caatgcggcc agttcgccac cccaccaacg
     4741 caggaatccc ggccccgccg agcgtgacca ggcaagcttc atgcgttcga tggatggtgc
     4801 gctcgcggtg gccatggacg gggtcgggtc agggcgccga agtgaaaccg ctgcgccagt
     4861 cgagcacttt gtacgggcgt gcctgggttc ccgtcaacgc caggcgtatc gtcacgtcca
     4921 ggcctgcgcg gttgccgtcc ggcatttccg cgacgctgaa gacgcgttcc accacgccac
     4981 cgtacccggc caccagcggt ccgttcgcga ccgcgccgaa cgcctggccg ttgcccgcgc
     5041 cccgctgcgc cgcgcgcttg cgccttgcat ccaccaacgc cccggcctgc gcggcatcga
     5101 cgccgcgcag cgacgccagc accagcgcac cggcatacga cgcatccggg aaattgcggc
     5161 ccgaatacac cgtgaccgtg ttttccacct tgccgaaaag cgccaggtcc atgccctgca
     5221 accgcgccag ctggtcgatc gcgcggaatg gctggccggg cttgcccgaa acgccgccgc
     5281 gcgtggtcac caccgcgtcc gccaactggc cggcgcgcag ggcatccgcg cccgcggcct
     5341 ggaaaatgcc gcgcagcagc gtggccggcg cggcgttgag gtcggccatg ccgctcacgt
     5401 cgaccaccct gacggtgact ttcgcgccgt cgaaggtgaa ggtgtagggc cgcccgtccg
     5461 gcacccattg atgctgctgg tccggcgcgc gcaggcccgc gacggcttgc gccaaacccg
     5521 cctccgcggc aagttcggcc cgcgcatgct cagcgccgta cagcgcggcc tgcccgtggc
     5581 tgcgcgacgc cgccgccacg cccgcaagca gcgccgcgag cagcaccgtc gcccacaaca
     5641 ccagcagcag ggccgtgccg cgctcgcgct tgcgcttgcg caggatcatc gcgccccccc
     5701 gatctgggcg ccgaaaccct ggcccgcatg caccgggatc accatgtccg gaaatccgac
     5761 ccgcgtgcgc cacgcgggat cgagatggat gcgcaccgcc agcggcaatc cattcgtggc
     5821 tcgccagtca tcgcgccatg ccgccggctt gccgaatgcg gcagccgcga ggtactagaa
     5881 gtggccgccg cgaagatccg tcagcaacac gtgttcgacc ggctggccat tcgccgatgg
     5941 ctgttccgtg tagggctggt acgagagacg cagcgccatg cccgcgcctt ccttttgcag
     6001 gctcaccgcc tggatgtaca aacccgcatg gccggattgc atcggcaagg gcgcgacgta
     6061 ctccatcgaa gccgcgtcac cccggaacat gcgcgcggcc gacccatccg tcatcgtgaa
     6121 cggttgcggc tccgcggcac cgatgtaacg gcgcaggaat tgctgcacgg tgcgcacgga
     6181 ttcgccctgc gccatcacgg catcggcgga acgggtgacg tgcgcggcac ctcgcatggc
     6241 gccccataca cccagcatca cgaacgcgag cagcgccagc gccagcagga tttccagcag
     6301 cgtgaaaccg tgttggcgga tcgcacgctt cattcgtccg cgtcccgcgc cggagcggcc
     6361 tgcgcgcgtt gggtcgacaa cctcaggacg cggcccgcgc cgtattgcac cgtcgcatcg
     6421 agctgccaaa gttcgattgc cgccgcctgc gccatcatca cgccgccctg ctgcagtgcg
     6481 acggccgcgg cacccgcgcg ctgcgccgac cggggcagcg cgtgcacctt caacgtccag
     6541 cgcatcccgt cgtcgaaggt cccctcggtg ctttcatcct tcaatggcgc gaccatgcct
     6601 tgttccgcga acaggctctg cgcgtgctcg accgcggcat ccagcgcaac ggcacgcgcg
     6661 gcattctgcg cggacttccc cagcgcaccc agcccgatcg cgaacgcgat cgccagcagg
     6721 gcgatcgcgg ccagcacttc gatcaaggtg aacccgcgcg ggcgctcgct catcgcggcg
     6781 ctccgctgct gacggtcacc gcaccggtca gccagtccac gtccacgcgc gcgctgcgcc
     6841 ggtcttcgct cagagtgacg ttgccgccgc tggaactgcc gtccgggaaa tagccgatgc
     6901 gcgcgagacc gggctgcctg ccggcctcgg cggccgattc gacacgcacg gtcgcgtccg
     6961 ccggcaagtc gcgcggatcg cgcccgggta
//
LOCUS       DASSVL010000424         3051 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_899738, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000424 DASSVL010000000
VERSION     DASSVL010000424.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3051)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3051)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3051
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_899738"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..535
                     /locus_tag="VFM52_07460"
     CDS             <1..535
                     /locus_tag="VFM52_07460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019463637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="kinase"
                     /protein_id="HET8765043.1"
                     /translation="FLLSVLAALPQASERLPVSWPRFDKGRDTRLPPSRWPRVARPPQ
                     LVIVEGWALGVRPQLQSALETPVNRLERDEDPDGRWRHWVNKQLRGYQPLWRKFDALI
                     VLQAPSWDIVRRWRGETEQALLARRAPLAMDAPTLARFLQHFERLSRHALATLPALAD
                     SIVEYDDDRHMIGLTHA"
     gene            complement(698..1048)
                     /locus_tag="VFM52_07465"
     CDS             complement(698..1048)
                     /locus_tag="VFM52_07465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017915742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal-binding domain-containing protein"
                     /protein_id="HET8765044.1"
                     /translation="MNLLPIPHAMVTTGNELHGYRVTRALGIVRGITVRSRSVVGNLG
                     AALQTLVGGNITIYTELCEKAREEAFELMLQHAAEMGANAVLAMRYDANDVAEGVTEV
                     LAYGTAVQVEPVAG"
     gene            complement(1069..1902)
                     /locus_tag="VFM52_07470"
     CDS             complement(1069..1902)
                     /locus_tag="VFM52_07470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008435823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HET8765045.1"
                     /translation="MAERILLAGCGDLGLRVATLLLAQGDAVWALRRQPLVRAPKGLR
                     WVGADLTAPHTLSSLPGGITRLVYLPAPDLRDRAAYHALFVDGLRNLLQALDATALRR
                     VLLVSSSAVYGEHDDDWVDEDTPPAPLGFNGAILREAEELLGAQPVSSVVLRLAGLYG
                     PGRLQLIERLRAGVVRVPREVPHWTNRIHVDDAAAAIVHLLRLPAPQALYLGVDDTPL
                     PLDELYDFLAQLVDAPPPREGPPPAGIGSKRLSNARLRASGWAPQWPDARDGYAALLD
                     I"
     gene            1931..2479
                     /locus_tag="VFM52_07475"
     CDS             1931..2479
                     /locus_tag="VFM52_07475"
                     /EC_number="2.7.1.71"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015446986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004765 - shikimate kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0008652 - amino acid biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009073 - aromatic amino acid family
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate kinase"
                     /protein_id="HET8765046.1"
                     /translation="MNPSRNLFLIGPTGAGKTSLGRRLATHYGLSFVDLDHAIEEHTG
                     ADVGTVFAIEGEAGFRRRESALLAEHAAGNDVLLATGAGAVLDPANRALLAGHGYVLW
                     VQAGIDQQLARLAHDTQRPLLAATDRHARLTAMAAARDPLYRATADLVLPAAHGVSAS
                     FTHAIVLLDRHWQRAASSRTAS"
     gene            2476..>3051
                     /locus_tag="VFM52_07480"
     CDS             2476..>3051
                     /locus_tag="VFM52_07480"
                     /EC_number="4.2.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017915045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0016829 - lyase activity [Evidence IEA];
                     GO_function: GO:0030554 - adenyl nucleotide binding
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-dehydroquinate synthase family protein"
                     /protein_id="HET8765047.1"
                     /translation="MTSHEPLSIDVDLGARSYPVWIGRGLLADAERWRARLRGKHVLV
                     VSNTTVAPLYLERVTRGLDGLRWSQYLIGDGEAHKSFANVEHVLGALAALGATRDACV
                     LALGGGVVGDLAGFAAACWMRGIDVVQLPTTLLAMVDSSVGGKTAVDLPQGKNLVGAF
                     HPPRAVFADTTVLRTLPDRELRAGLAETVKYG"
BASE COUNT          429 a         1123 c         1061 g          438 t
ORIGIN      
        1 attcctgctc tcggtgctgg ccgcgctgcc gcaagcctcc gagcgcctgc cggtgtcctg
       61 gccgcggttc gacaagggcc gcgacacgcg cctgccgccg tcgcgctggc cgcgcgtcgc
      121 gcgcccgccg cagctggtca tcgtcgaggg ctgggcgctg ggcgtccggc cgcagctgca
      181 atccgcgctc gagacgccgg tgaaccggct ggagcgcgac gaggatccgg atggccgctg
      241 gcggcactgg gtgaacaagc agttgcgcgg ctaccagcca ctgtggcgca agttcgacgc
      301 gctgatcgtg ctgcaggcgc caagctggga catcgtgcgc cgctggcgcg gcgaaaccga
      361 gcaggcgctg cttgcgcgcc gcgcgccgct ggcgatggac gcgccgacgc tcgcgcgttt
      421 cctgcagcat ttcgagcgct tgagccgcca cgcgctggcc accctgccgg cgctggccga
      481 cagcatcgtc gagtacgacg acgaccgcca catgatcggg ctcacccacg cgtgagcccg
      541 ggctggatcc cgagcttgga gggattcggc atcctgcggc gtttttcatc ggcgcgtctg
      601 gtacccgcca gcccgcactc ctgcgaatca gtcaggggcg caaccgttcg cgatcgcccc
      661 ccgtggcctg gcttcgggtc cgaagatccg caaactctca gccggccacc ggttcgacct
      721 gcaccgcagt gccgtaggcc agcacctcgg tgaccccctc ggcgacgtcg ttggcgtcgt
      781 agcgcatcgc cagcaccgcg ttcgcgccca tctccgcggc gtgctgcaac atcagctcga
      841 acgcctcctc gcgcgccttc tcgcacagct cggtgtagat cgtgatgttg ccgccgacca
      901 gggtctgcaa tgcggcgccg aggttgccga cgacgctgcg cgaacgcacg gtgatgccgc
      961 gcacgatgcc gagcgcgcgg gtgacgcgat atccgtgcag ctcgttgccg gtggtgacca
     1021 tggcgtgcgg aatcggaagc aggttcatgg gtgggctccg gtggggattc agatatccag
     1081 caaggcggcg tagccgtcgc gcgcatcggg ccattgcggc gcccagccgc tggcccgcag
     1141 gcgcgcgttg gacagccgct tgctgccgat gccggccggc ggcggtccct cgcgcggcgg
     1201 cggcgcatcg accagttgcg cgagaaagtc gtacagctcg tcgagcggca gcggggtgtc
     1261 gtcgacgcca aggtacagcg cctgcggcgc gggcagccgc agcaggtgca cgatcgccgc
     1321 ggcggcatcg tcgacgtgga tgcggttggt ccagtgcggc acctcgcgcg gcacgcgcac
     1381 cacgccggcg cgcaggcgct cgatcaattg caggcgcccc ggcccgtaca ggccagccag
     1441 ccgcagcacg acgctcgata ccggctgtgc ccccagcagc tcttccgcct cgcgcaggat
     1501 cgcgccgttg aacccgagcg gcgccggcgg cgtgtcctca tcgacccaat cgtcgtcgtg
     1561 ctcgccgtac accgcgctcg acgacaccag cagcacgcgc cgcagcgccg tcgcatcgag
     1621 cgcctgcagc aggttgcgca ggccgtcgac gaacagcgcg tggtaggccg cgcgatcgcg
     1681 caggtccggc gccggcagat acaccagccg ggtgatgccg cctggcaggc tcgacaaggt
     1741 atgcggcgcg gtgaggtcgg cgccgaccca gcgcaagccc ttcggggccc gcaccaaggg
     1801 ctggcggcgt aacgcccaca ccgcgtcgcc ctgcgccagc agcagggtcg ccacgcgcaa
     1861 accgaggtcg ccgcacccgg caagcaagat tcgttcagcc atccaatcac ctgctgctaa
     1921 agtccgcgcc atgaacccgt cgcgcaacct gttcctgatt ggcccgaccg gcgccggcaa
     1981 gacttcgctc ggccgccgtc tcgccactca ttatggcttg tctttcgtcg acctcgacca
     2041 cgcgatcgag gagcacaccg gggccgacgt cggcaccgtg ttcgcgatcg agggcgaggc
     2101 gggtttccgc cggcgcgaat cggcgctgct ggcggaacat gccgccggca acgatgtgct
     2161 gctggcgacc ggcgccggtg ccgtgctgga cccggccaac cgcgcgctgc tcgccgggca
     2221 tggctacgtg ctgtgggtgc aggccggcat cgaccagcaa ctggcgcgcc tggcgcacga
     2281 cacccagcgc ccgctgctgg ccgccacgga tcgccatgcc aggctgaccg cgatggccgc
     2341 cgcgcgcgac ccgctgtacc gcgccaccgc cgacctggtg ctgccggccg cgcacggcgt
     2401 cagcgcttcc ttcacccacg ccatcgtgct gctcgaccgc cactggcagc gcgccgcgtc
     2461 atcgcgaacc gcctcatgac ctcgcacgaa ccactctcca tcgacgtcga tctcggcgca
     2521 cgcagctacc cggtgtggat cggccgcggc ctgctcgccg acgcggaacg ctggcgcgcg
     2581 cgcctgcgcg gcaagcacgt gctggtggtg agcaacacca cggtggcgcc gctgtatctg
     2641 gaacgcgtga cgcgcgggct ggacggcctg cgctggtcgc agtacctgat cggcgacggc
     2701 gaggcgcaca agagcttcgc caacgtcgag catgtgctcg gcgcgctcgc cgcgctcggc
     2761 gccacccgcg acgcctgcgt gctcgcgctc ggcggcggcg tggtcggcga cctcgccggt
     2821 ttcgccgcgg cctgctggat gcggggcatc gacgtggtgc agctgccgac gacgctgctg
     2881 gcgatggtgg attcctccgt cggcggcaag accgcggtgg acctgccgca gggcaagaac
     2941 ctggtcggcg ccttccatcc gccacgcgcg gtcttcgccg acacgacggt gctgcggacc
     3001 ctgccagacc gcgaactgcg cgccggcctg gcggaaacgg tgaagtacgg a
//
LOCUS       DASSVL010000425         2558 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1266705,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000425 DASSVL010000000
VERSION     DASSVL010000425.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2558)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2558)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2558
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1266705"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..154
                     /locus_tag="VFM52_07485"
     CDS             <1..154
                     /locus_tag="VFM52_07485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015446773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HET8765048.1"
                     /translation="DDTSWYAGAGVGYNLTPQLSVGLNYDYYDAKKQNVNLSTDMVSV
                     NAEYRF"
     gene            309..893
                     /locus_tag="VFM52_07490"
     CDS             309..893
                     /locus_tag="VFM52_07490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007080284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="porin family protein"
                     /protein_id="HET8765049.1"
                     /translation="MYRKLLPLAVAACGLFATAAQADQTNGWFVNGNVGTAHYKATVS
                     GVPGSGTDSNTAFMLNAGYRDQGILGFEAGYTNLGSVTAKDDSGDRAKIKADGWTLGL
                     NGHFNLTDQWYLSARGGLFLWKLKADATIGSGSNRATYRASKQALDWYAGVGTGYDIN
                     RHWSVGAAFDYYKISDHSYDVGSRVFSVNAEYRF"
     gene            complement(972..1976)
                     /locus_tag="VFM52_07495"
     CDS             complement(972..1976)
                     /locus_tag="VFM52_07495"
                     /EC_number="4.1.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014038296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004332 - fructose-bisphosphate aldolase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I fructose-bisphosphate aldolase"
                     /protein_id="HET8765050.1"
                     /translation="MSIEDLESVALAMVAPGKGIIAIDESTRTIKKRFDAVGIECTEE
                     NRRAYRELLLTTPNLGEHISGAILYDETLRQKTRDGVPFVEVMKKAGIIPGIKVDKGT
                     VALAGFPGDVVTEGLDGLRERLAEYAKLGAQFCKWRAVINISEDSPSSTAIEANAHAL
                     ARYAALCQEAGLVPMVEPEVIMDGDHTIEVSYEVHEAVLRSVFNALYEQNVMLEGVIL
                     KTSMVIPGKSCEEQADVEEVAEATVRVLKTCVPASLPGIVFLSGGQTDQQSTAHLNAM
                     NRIGPHPWPLSFSYGRAMQQAALKLWAKDMKANYAEAQKTVHARAKDNGLAALGQWNG
                     "
     gene            complement(2093..2530)
                     /locus_tag="VFM52_07500"
     CDS             complement(2093..2530)
                     /locus_tag="VFM52_07500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008207524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HET8765051.1"
                     /translation="MTIRTLFRSLLVALPALACAMPALAQTRRVGPQDLYHYWILLNT
                     KVETNAPASGLNLNAPGCAAVTYTIGSDGVPMNVQLAKLVPKSDLGPTAVTAVKDFRY
                     GPSLTNRAGNPIDTYYVIPFNAPDDKAGQAKVMAPCKLPGYGH"
BASE COUNT          420 a          866 c          838 g          434 t
ORIGIN      
        1 ggacgacacc agctggtacg ccggcgccgg cgtcggctac aacctcaccc cgcagctcag
       61 cgtgggcctg aactacgact actacgacgc gaagaagcag aacgtcaacc tgagcaccga
      121 catggtgtcg gtgaacgccg aataccgctt ctgatcggat cgatccccgt tgcacgaacc
      181 gcgaagggcg ccgcaaggcg cccttcgtct ttccggcggc ctttgagttt ccgttaaatc
      241 cccgttagca tccggcggcc gcgcaacacc gcggcatgaa tacccaccag ggcacaagga
      301 gtcccaacat gtaccggaaa ctgcttccac tcgccgtcgc cgcctgcggc ctcttcgcca
      361 ccgccgccca ggccgaccag accaacggct ggttcgtcaa cggcaacgtc ggcaccgccc
      421 actacaaggc cacggtcagc ggcgtgcccg gcagtggcac cgacagcaac acggccttca
      481 tgctcaacgc gggctaccgc gaccagggca tcctcggctt cgaggccggc tacaccaacc
      541 tcggcagcgt caccgcaaag gacgactccg gcgaccgcgc caagatcaag gccgacggct
      601 ggacgctcgg cctgaacggc cacttcaacc tgaccgacca gtggtacctg tcagcacgcg
      661 gcggcctgtt cctgtggaag ctgaaggccg atgccaccat cggcagcggc agcaaccgcg
      721 ccacctaccg cgccagcaag caggcgctcg actggtacgc cggtgtcggc accggctacg
      781 acatcaaccg ccactggagc gtcggcgcgg cgttcgacta ctacaagatc agcgatcaca
      841 gctacgacgt cggcagccgc gtgttctctg tgaatgccga ataccgcttc tgagcggcac
      901 cgcgaccaag ctggaaacag gacgggcgcc gcgaggcgcc cgtctttttg ttgtcgcgct
      961 gccggagcgg ctcagccgtt ccactggccg agcgcggcga ggccgttgtc cttcgcgcgg
     1021 gcgtgaacgg tcttctgcgc ctcggcgtag ttcgccttca tgtccttcgc ccacagcttg
     1081 agcgcggcct gctgcatggc gcggccgtag gagaacgaca gcggccacgg gtgcgggccg
     1141 atgcggttca tcgcgttgag gtgcgcggtc gactgctggt cggtctggcc gccggacagg
     1201 aacacgatgc ccggcagcga cgccggcacg caggtcttca gcacgcgcac cgtcgcctcg
     1261 gcgacttcct cgacgtcggc ctgctcctcg cagctcttgc cggggatgac catgctggtc
     1321 ttgaggatca cgccctcgag catgacgttc tgctcgtaca gcgcgttgaa cacgctgcgc
     1381 agcacggcct cgtgcacctc gtagctgact tcgatggtgt ggtcgccgtc catgatgact
     1441 tccggctcga ccatcggcac cagcccggct tcctggcaca gcgcggcata gcgcgccagc
     1501 gcatgggcgt tggcctcgat cgcggtcgag ctcgggctgt cctcggagat gttgatgacg
     1561 gcgcgccatt tgcagaactg ggcgccgagc ttggcgtatt cggccagccg ctcgcgcagg
     1621 ccatccagac cctcggtcac cacgtcaccc gggaaaccgg ccagcgccac ggtgcccttg
     1681 tccaccttga tgccggggat gatgccggcc ttcttcatca cctcgacgaa cggcacgccg
     1741 tccctggtct tctggcgcag cgtctcgtcg tacaggatgg cgccggagat gtgctcgccg
     1801 aggttcggcg tggtcagcag caactcgcgg taggcgcggc ggttttcctc cgtgcactcg
     1861 atgccgacgg cgtcgaaacg cttcttgatg gtgcgggtcg attcgtcgat ggcaatgatg
     1921 cccttgccgg gggcgaccat ggccaaggca acgctttcga gatcttcgat actcatgacg
     1981 gctccgtgcg gcgaggcgat gacgacccgc tcaggtgggt gccgcccggc tccgggcggc
     2041 aggttcagta ccgtggattt tatcggaacg ccgccgggcg ccaccgggta gctcagtggc
     2101 cgtaccccgg cagcttgcac ggtgccatca ccttggcctg cccggccttg tcgtccggcg
     2161 cgttgaacgg gatgacgtaa taggtgtcga tcgggttgcc ggcacggttg gtcagcgacg
     2221 gcccgtagcg gaaatccttc accgcggtga ccgccgtcgg gccgagatcg ctcttgggga
     2281 ccagcttggc gagctgcacg ttcatcggca cgccatcgga accgatcgtg taggtgaccg
     2341 ccgcgcagcc gggcgcgttg aggttcagcc cgctggccgg cgcgttggtc tcgaccttgg
     2401 tgttgagcag gatccagtag tggtacaggt cctgcggccc gacccgtcgg gtctgcgcca
     2461 gcgccggcat ggcgcaggcg agggcgggaa gcgcgacgag cagggaacgg aaaagtgtgc
     2521 ggatggtcat gcggggctcc ttgcggcgag gaaattcg
//
LOCUS       DASSVL010000426         2062 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_235538, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000426 DASSVL010000000
VERSION     DASSVL010000426.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2062)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2062)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2062
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_235538"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1288)
                     /locus_tag="VFM52_07505"
     CDS             complement(<1..1288)
                     /locus_tag="VFM52_07505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015446756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015333 - peptide:proton symporter
                     activity [Evidence IEA];
                     GO_process: GO:0015833 - peptide transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide:H+ symporter"
                     /protein_id="HET8765052.1"
                     /translation="MSDTTPAGRAATLPDYPQLLGHPRPLWMLFMAEFWERFAFYGMR
                     WALTLYIVAQFWGGDEAGQADASRTYGAYLALVYATAVFGGYVADKVIGYQRSILVGA
                     VVMAAGLFMVMVPNQSVFTFGLATIIVGNGLFKPNISSMVGQLYAPGDSRRDRGFTLF
                     YMGINAGALIAPVLTSVLADRVFGTPGHHNYHVVFAASGIGMLISLVWFWFGRRQLGP
                     VGRPAPDQQSRARVGWVVLGVLVAVPLVWLLMDKAGAVAIQWLLTALFIGVGVLLVVE
                     ALRTGRVALQRVAAMLIIFAFNVLFWMFFEQAGSSFNFLAQHIVDRNLGGWEFPVGWF
                     QSVNPIAIVLLAPLVTLAWGALDKRRIEPSIPRKFGLGLIGNALGFVVLMYALSNLVD
                     GSGMIPLWTLVLCYVLQTAGELCLSPIGLSMVTKLAP"
     gene            complement(1477..>2062)
                     /gene="pgeF"
                     /locus_tag="VFM52_07510"
     CDS             complement(1477..>2062)
                     /gene="pgeF"
                     /locus_tag="VFM52_07510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008210990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="peptidoglycan editing factor PgeF"
                     /protein_id="HET8765053.1"
                     /translation="LRDALGLPAAPRWLHQVHGREVIEQGVAPPAGEPDADAAVTRTP
                     GVALAILTADCLPVLLAADDGSVVGAAHAGWRGLAAGVLESTLHAMRCAPDRVVAWLG
                     PCIGGPSYEVGEEVRAAFVDHAPDAARCFAPTRPGHWRCDLAALARQRLAAAGVTSVH
                     GGGFDTFTDPRFYSYRREGARSGRFASLVWMAGG"
BASE COUNT          382 a          745 c          693 g          242 t
ORIGIN      
        1 gcggcgcgag cttggtcacc atcgacaggc cgatcggcga caggcacagc tcgccggcgg
       61 tctgcagcac gtagcacagc accagtgtcc acagcgggat catgccgctg ccgtcgacca
      121 ggttcgaaag cgcgtacatc agcaccacga agccgagcgc gttgccgatc aggccgaggc
      181 cgaacttgcg cgggatcgac ggctcgatgc ggcgcttgtc gagcgcgccc caggccagcg
      241 tcaccagcgg cgcgagcagc acgatcgcga tcgggttcac cgactggaac cagcccaccg
      301 gaaattccca gccgccgagg ttgcggtcga cgatgtgctg ggcaaggaaa ttgaacgagc
      361 tgccggcctg ctcgaagaac atccagaaca gcacgttgaa cgcgaagatg atgagcatcg
      421 ccgccacgcg ctgcagcgcc acgcgaccgg tgcgcaacgc ttccaccacc agcagcacgc
      481 cgacgccgat gaacagcgcg gtgagcagcc actggatcgc gaccgcgccg gccttgtcca
      541 tcaagagcca caccagcggc accgcgacca gcacgcccag caccacccag cccacgcgcg
      601 cgcggctttg ctgatccggc gccggacggc ccaccgggcc gagctggcgg cggccaaacc
      661 agaaccacac caggctgatc agcatgccga tgccggaagc ggcaaacacc acatggtagt
      721 tgtggtggcc cggcgtgccg aacacgcggt cggcgagcac gctggtcagc accggcgcga
      781 tcagcgcgcc ggcgttgatg cccatgtaga acagcgtgaa gccgcgatcg cggcgcgagt
      841 cgcccggcgc gtagagctgc cccaccatcg acgagatgtt cggcttgaac aggccgttgc
      901 cgacgatgat cgtcgccagg ccgaaggtga acacgctctg gttcggcacc atcaccatga
      961 acaggccggc cgccatcacc accgcgccga cgaggatcga gcgctggtag ccgatgacct
     1021 tgtcggcgac gtagccgccg aacaccgccg tggcgtagac cagcgcgaga taggcgccat
     1081 aggtgcggct ggcatccgcc tgccccgcct cgtcgccgcc ccagaactgg gcgacgatgt
     1141 acagcgtgag cgcccagcgc atgccgtaga acgcgaagcg ctcccagaac tccgccatga
     1201 acagcatcca cagcggccgc gggtggccga ggagttgcgg gtaatcgggc agcgttgcgg
     1261 ctcgcccggc aggtgtggtg tcgctcatgt ctacccctgt caatggatgg gtcgcaacaa
     1321 attgcgatcg ccagatgtac tggcagcgcg cggcaaggtc aaccacacgc agggggaaat
     1381 caggcaagtg cggcgaccgt accaaggcag cttgcgagtg gttggtcggc ggcgccaagc
     1441 ggcgcgatcg tctacgccac caccccaccc cggggatcag ccgccggcca tccagaccag
     1501 gctggcgaag cgcccgctgc gcgcgccctc gcgccgatag gaatagaacc gcgggtcggt
     1561 gaacgtgtcg aaaccgccac cgtgcacgct cgtcacaccg gcggcggcaa gccgctggcg
     1621 cgcgagcgcg gcgagatcgc accgccagtg ccccggccgc gtgggcgcaa agcagcgcgc
     1681 cgcatcgggt gcgtggtcga cgaaagccgc gcgcacctct tcgcccactt cgtacgacgg
     1741 cccgccgatg cacggcccga gccaggcgac gacccgatcc ggcgcgcagc gcatggcgtg
     1801 cagcgtcgac tccagcacgc cagcggccag cccgcgccag cccgcgtgcg cggcgccgac
     1861 gacgctgccg tcatccgccg ccaatagcac cggcaggcaa tcggcggtga ggatggcaag
     1921 cgccacgccc ggcgtgcgcg tcaccgcggc gtccgcgtcc ggttcgcccg ccggcggcgc
     1981 gacgccctgt tcgatcacct cgcggccatg cacctggtgc agccagcgcg gggccgccgg
     2041 caggccgagc gcgtcacgca gg
//
LOCUS       DASSVL010000427         2510 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_461454, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000427 DASSVL010000000
VERSION     DASSVL010000427.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2510)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2510)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2510
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_461454"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1688
                     /locus_tag="VFM52_07515"
     CDS             <1..1688
                     /locus_tag="VFM52_07515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015447476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="S46 family peptidase"
                     /protein_id="HET8765054.1"
                     /translation="ACESDGYRCDVYTFHGGYSYQLIKQLEIKDVRLVYAPPESIGKF
                     GGDVDNWMWPRHTGDFGYLRAYVGKDGKSAAFSKDNVPYQPKHVLKVNAKGVEAGDYV
                     MVTGYPGRTNRYRLADEVQSAIDDTYPTQIGVYQDTLDIINTAGKADPKVAVKYASMV
                     AGLNNYLKNFGGQLEGLRRADAVAVKRAQEAQLEGWLKQQGGAQNFALAADIGRLRTA
                     IAAERGNRERDLALGLVNRAALFNTGVRLVHLAKERPKADLDRDAGYQQRDWVRIEGG
                     LKQLDRRYDAGVDQQFMAYGLARYVNLPAAQRLPALDAWLGGATTAGQIKAKVAALYA
                     GSQLGQLDARLKWFDADGKAIDASTDAMLTLARAVQPELQKLEDQQDARAGEMSKLRP
                     RYMQAMIAWKESQGLPVYPDANSSLRVTFGNVQGVAPRDGVSYAPFTTVAGIVEKDTG
                     VEPFDAPKAEIAAIKAKAFDGYASPKLGTLPVNFLADLDITGGNSGSPALDANGQLVG
                     LAFDGNWESVSGDWLFNPRLNRSIQVDVRYMLWVTHHLDHADTLLREMGVATR"
     gene            1897..>2510
                     /gene="miaA"
                     /locus_tag="VFM52_07520"
     CDS             1897..>2510
                     /gene="miaA"
                     /locus_tag="VFM52_07520"
                     /EC_number="2.5.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007509858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0052381 - tRNA dimethylallyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (adenosine(37)-N6)-dimethylallyltransferase
                     MiaA"
                     /protein_id="HET8765055.1"
                     /translation="MPIDVRPPAIFLMGPTASGKTALACALAERFPLALVSVDSALVY
                     RGLDIGAAKPDAATLARHPHALIDIRDPAEPYSAADFRVDALAALAAATRQGRVPLLV
                     GGTGLYFRALQQGLANLPEADPAFRACLADEAARVGWPALHARLARLDPATAARLSPN
                     DAQRVQRALEVVALTGTPLSALHAAGQRARLPWRVLKLALVPGDR"
BASE COUNT          410 a          860 c          874 g          366 t
ORIGIN      
        1 aggcgtgcga gagcgacggc tatcgctgcg acgtctacac gttccacggc ggctacagct
       61 atcagctgat caagcagctg gagatcaagg acgtgcgcct ggtctatgcg ccgccggagt
      121 cgatcggcaa gttcggcggc gacgtggaca actggatgtg gccgcgccac accggcgact
      181 tcggttatct gcgcgcctac gtcggcaagg atggcaagtc cgcggccttc tcgaaggaca
      241 acgtgccgta ccagcccaag cacgtgctca aggtgaacgc gaagggcgtc gaggccggcg
      301 actacgtgat ggtcaccggc taccccggcc gcaccaaccg ctaccgcctc gccgacgagg
      361 tgcagagcgc gatcgacgac acctacccga cccagatcgg cgtctaccag gacacgctgg
      421 acatcatcaa taccgcgggc aaggccgatc ccaaggtcgc cgtgaagtac gccagcatgg
      481 tcgccggcct caacaactac ctgaagaact tcggcggcca gctcgaaggc ctgcgccgcg
      541 ccgatgcggt ggcggtcaag cgcgcgcagg aagcgcagct cgaaggctgg ctgaagcagc
      601 agggcggcgc gcagaacttc gcactggccg cggacatcgg caggctgcgc accgcgattg
      661 ccgccgagcg cggcaaccgc gaacgcgacc tcgcgctcgg gctggtcaat cgcgcggcgc
      721 tgttcaacac cggcgtgcgc ctcgtgcacc tcgccaagga gcggccgaag gccgacctcg
      781 atcgtgacgc cggctaccag cagcgcgact gggtgcgcat cgaaggcggc ctgaagcagc
      841 tcgaccgccg ctacgatgcg ggcgtcgacc agcagttcat ggcgtacggt ctcgcgcgct
      901 acgtgaatct gccggcggcg cagcgcctgc cggcgctgga cgcctggctt ggcggcgcga
      961 cgactgccgg gcagatcaag gcgaaggtcg ccgcgctgta tgcgggcagc cagcttggcc
     1021 agctcgacgc gcggctcaag tggttcgacg cggacggcaa ggcgatcgat gccagcacgg
     1081 atgcgatgct cacgctcgcc cgcgccgtgc agccggaact gcagaagctg gaagaccagc
     1141 aggatgcgcg tgccggcgag atgagcaaac tgcgtccgcg ctacatgcag gcaatgatcg
     1201 cgtggaagga atcgcagggt ctgccggtgt atccggatgc gaacagctcg ctgcgcgtca
     1261 ccttcggcaa cgtgcagggc gtggcgccgc gcgacggcgt gagctatgcg ccgttcacca
     1321 ccgtggccgg catcgtcgag aaggacaccg gggtcgagcc gttcgacgcg ccgaaggcgg
     1381 aaatcgcggc gatcaaggcc aaggcgttcg acggctacgc ttcgccgaag ctcggcacgc
     1441 tgccggtgaa tttcctcgcc gatctcgaca tcaccggtgg caattccggc tcgcccgcgc
     1501 tggacgcgaa cggccagctc gtcggcctcg cgttcgacgg caactgggaa tcggtgagcg
     1561 gcgactggct gttcaacccg cggctcaacc gctcgatcca ggtcgacgtg cgctacatgc
     1621 tgtgggtgac gcaccacctc gaccacgccg acaccctgct gcgcgagatg ggcgtcgcga
     1681 cgcgataaga agctttgtcc gggttggcga gaaaggccgc tgcaaggcgg cctttcccgt
     1741 cgcggcagtt gtccaccgcc aatgtggaaa gaccggggac aagcctgtgg acaaccgcgt
     1801 ttcgcgtcga cgcgacaagc ccttgcgtcg gattggcgag aaattgccca acgcccgctg
     1861 cgctacgctt gccgcccccg cgttcgccgt gaccgcatgc ccatcgacgt ccgaccaccc
     1921 gcgattttcc tgatgggccc gactgcgtcg ggcaagaccg cgctggcctg cgcgctggcc
     1981 gagcgcttcc cgctggcgct ggtcagcgtc gattccgcgc tggtctatcg cgggctggat
     2041 atcggtgcgg ccaagccgga tgcggcgacg ctcgcgcgcc acccgcatgc gctgatcgac
     2101 atccgcgatc ccgccgagcc gtactcggcg gcggacttcc gcgtcgatgc gctggcggcg
     2161 ctggccgcgg ccacgcggca gggccgggtg ccgctgctgg tcggcggcac cggcctgtat
     2221 ttccgtgcct tgcagcaggg cctggccaat ttgcccgagg ccgatcccgc atttcgcgcc
     2281 tgccttgccg acgaggcggc gcgagtcggc tggccggcgc tgcatgcgcg gctggcccgg
     2341 ctcgatccgg caacggcggc gcgtctcagc ccgaacgatg cgcagcgcgt gcagcgcgcg
     2401 ctggaagtcg tcgcgctgac cggcacgccg ctgagcgcgt tgcacgccgc cggccagcgc
     2461 gcgcgcctgc cgtggcgggt gctgaagctg gcgctggtgc cgggtgaccg
//
LOCUS       DASSVL010000428         3270 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1351887,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000428 DASSVL010000000
VERSION     DASSVL010000428.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3270)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3270)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3270
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1351887"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..403)
                     /locus_tag="VFM52_07525"
     CDS             complement(<1..403)
                     /locus_tag="VFM52_07525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007809124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase P family N-terminal
                     domain-containing protein"
                     /protein_id="HET8765056.1"
                     /translation="MTTPIPARIAALRAAMHEHGIAAVVVPSADPHLSEYLPARWQAR
                     AWFSGFDGSAGTLIVTADHAGVWTDSRYFSQAERQLASTGITLMKLRVPHTPEHLDWL
                     AAHLHEGDTLAVAGDCVSLATLRNMDAHFVRH"
     gene            524..2194
                     /locus_tag="VFM52_07530"
     CDS             524..2194
                     /locus_tag="VFM52_07530"
                     /EC_number="6.3.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019464428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003883 - CTP synthase activity [Evidence
                     IEA];
                     GO_process: GO:0006221 - pyrimidine nucleotide
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0006241 - CTP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CTP synthase"
                     /protein_id="HET8765057.1"
                     /translation="MTPLIFVTGGVVSSLGKGIAAASLASILEARGLAVTLMKLDPYI
                     NVDPGTMSPFQHGEVYVTDDGAETDLDLGHYERFVHTRLSGKNSITTGKIYESVIRKE
                     RRGDYLGATVQVIPHITDEIKHCIHEATRGYDVALVEIGGTVGDIESLPFLEAIRQLR
                     IEHGPSKCLFMHLTLVPFIKAAGEIKTKPTQHSVKELRSIGIQPDVLLCRSEQPLPEA
                     ERRKIALFTNVPEEAVISAVDVDVIYKMPIWLHEQGLDEIVVKRLGLDAKPADLSAWE
                     STVDAAVHPKDEVTIAIVGKYVEHKDAYKSLGEALRHGGIKQRTRVNLRWIDSEQVEA
                     EGAEKVLGGVDAILVPGGFGKRGFEGKVLSSKYARENGVPYFGICYGMHAAVVDFARH
                     VAGLKDADSSENERNTANPVIGLITEWRTASGEIETRDEQSDLGGTMRLGSQECRLKA
                     GTLARELYGKDVVRERHRHRYEFNNRYRQMFEDLGLVIAGKSMDDLLVEMIELPRSQH
                     PWYLCCQAHPEFTSTPRDGHPLFIGFVRAAREYRSVRDGAKLAQERVA"
     gene            2191..3027
                     /gene="kdsA"
                     /locus_tag="VFM52_07535"
     CDS             2191..3027
                     /gene="kdsA"
                     /locus_tag="VFM52_07535"
                     /EC_number="2.5.1.55"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004152842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008676 - 3-deoxy-8-phosphooctulonate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-8-phosphooctulonate synthase"
                     /protein_id="HET8765058.1"
                     /translation="MKLCGFEVGLDQPLFLIAGPCVVESEQLQLDAAGRLKEITGKLG
                     INFIFKSSFDKANRTSATSFRGLGMQEGLRILSEVKKQIGVPVLTDVHEYTPFDEVAE
                     VVDVLQTPAFLCRQTDFIQKVASVGKPVNIKKGQFLSPWDMKNVVEKARAAGNDQIMV
                     CERGASFGYNNLVSDMRSLAVMRETNCPVVFDATHSVQLPGGQGNKSGGQREFVPVLA
                     RAAVAAGVAGVFMETHPKPEEALSDGPNAWPLGKMEALLATLKELDGATKRAGFLEAA
                     QQ"
     gene            3165..>3270
                     /locus_tag="VFM52_07540"
     CDS             3165..>3270
                     /locus_tag="VFM52_07540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017461177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8765059.1"
                     /translation="MTTTIKTIHAREVLDSRGNPTLEAEVTLADGAFGR"
BASE COUNT          615 a         1013 c         1105 g          537 t
ORIGIN      
        1 cgtgacgaac gaagtgcgcg tccatgttgc gcagcgtggc gagcgagacg cagtcgccgg
       61 ccaccgcgag cgtgtcgcct tcgtgcaggt gggcagcgag ccaatcgaga tgctcgggcg
      121 tgtgcggcac gcgcagtttc atcagcgtga tgccggtgct ggcgagctgg cgctcggcct
      181 gcgagaagta gcgtgaatcg gtccacacgc cggcgtggtc ggcggtgacg atcagcgtgc
      241 cggcggaccc gtcgaagccg gaaaaccacg ctcgcgcctg ccagcgggcc ggcaggtatt
      301 cggaaaggtg gggatcggcg ctgggcacga cgacggcggc gatgccatgt tcgtgcatgg
      361 ccgcgcgcaa ggccgcaatg cgcgcaggga tgggggtagt catgcgcggc atggtagcag
      421 gcgtgcccgg ttggcccggc tgaatcgcgt cgaccatgcc agcgagcctc gccgggtcgg
      481 cgatctgccg ctagaatacg tatttccagc acggctgcat tccatgactc ccctgatttt
      541 cgtcaccggc ggtgtcgtgt cctcgctagg caagggcatc gccgcggcgt cgctggcctc
      601 catcctcgaa gcgcgtggcc tcgcggtcac gctgatgaag ctcgatccct acatcaatgt
      661 cgatccgggc acgatgagcc cgttccagca cggcgaggtg tacgtcaccg acgacggcgc
      721 ggaaaccgat ctcgacctcg gccactacga gcgcttcgtc cacacccggc tctccggcaa
      781 gaactcgatc accaccggca agatctacga gtcggtcatc cgcaaggagc gccgcggcga
      841 ttacctcggc gcgacggtgc aggtgatccc gcacatcacc gacgagatca agcactgcat
      901 ccacgaggcg acgcgcggct acgacgtggc gctggtggag atcggcggca ccgtgggcga
      961 catcgagtcg ctgccgttcc tcgaagccat ccgccagctg cgcatcgagc acggcccgtc
     1021 caagtgcctg ttcatgcacc tgaccctggt gccgttcatc aaggccgccg gcgagatcaa
     1081 gaccaagccc acccagcatt cggtaaagga gctgcgctcg atcggcatcc agcccgacgt
     1141 gctcttgtgc cgcagcgagc agccgttgcc ggaggccgag cgccgcaaga tcgcgttgtt
     1201 caccaacgtg ccggaggagg ccgtgatcag cgcggtcgac gtcgacgtca tctacaagat
     1261 gccgatctgg ctgcacgagc aggggctgga cgagatcgtg gtgaagcgcc tcggcctgga
     1321 tgccaagccg gcggaccttt ccgcgtggga gagcaccgtc gatgcggcgg tgcatcccaa
     1381 ggacgaagtc accatcgcca tcgtcggcaa atacgtcgag cacaaggacg cctacaagtc
     1441 gctcggcgag gcgctgcgcc atggcggcat caagcagcgc acgcgggtca atctgcgctg
     1501 gatcgattcc gagcaggtcg aggccgaggg tgccgagaag gtgctgggtg gcgtcgacgc
     1561 gatcctggtg ccgggcggtt tcggcaagcg cggctttgag ggcaaggtgc tgtcgtcgaa
     1621 atacgcgcgc gagaacggcg tgccgtattt cggcatctgc tacggcatgc acgcggcggt
     1681 ggtcgatttc gcccgccacg tcgctggcct caaggacgcc gattccagcg agaacgagcg
     1741 caacaccgcc aacccggtga tcgggctcat caccgaatgg cgtaccgcct ccggcgagat
     1801 cgagacgcgc gacgagcagt ccgacctggg cggcaccatg cggctgggtt cgcaggagtg
     1861 ccgcctgaag gccggcaccc tggcgcgcga gctgtacggc aaggacgtgg tgcgcgagcg
     1921 tcatcgccac cgctacgagt tcaacaaccg ctaccgccag atgttcgagg acctcggcct
     1981 ggtgatcgcc ggcaagtcga tggacgacct gctggtggag atgatcgagc tgccgcgcag
     2041 ccagcacccg tggtacctgt gctgccaggc gcaccccgag ttcacctcga cgccgcgcga
     2101 cgggcatccg ctgttcatcg gtttcgtgcg cgccgcccgc gagtaccgca gcgtgcgcga
     2161 tggcgcgaag ctggcgcagg agcgcgtggc atgaagctgt gcggtttcga ggtcggcctg
     2221 gaccagccgc tgttcctgat cgccggcccc tgcgtggtcg agtccgagca attgcagctc
     2281 gatgccgccg gccgcctgaa ggaaatcacc ggcaagttgg gcatcaactt catcttcaag
     2341 tccagtttcg acaaagccaa ccgcacctcc gcgacgagtt ttcgcggcct cgggatgcag
     2401 gaaggcttgc ggattctgtc cgaagtgaaa aaacaaattg gtgtgccggt gctgaccgac
     2461 gtgcacgaat acacgccgtt cgacgaagtc gccgaagtcg tggatgtatt gcagacgcct
     2521 gcgttcctgt gccgccagac cgatttcatc cagaaggtcg caagcgtcgg caagccggtg
     2581 aacatcaaga agggccagtt cctgtcgccg tgggacatga aaaacgtggt ggagaaagcg
     2641 cgcgcggccg gcaatgacca gatcatggtg tgcgaacgcg gtgcgagttt cggctacaac
     2701 aatctcgttt ccgacatgcg ctcgctggcg gtgatgcgcg agacgaattg cccggtggtg
     2761 ttcgacgcca cgcactcggt gcagttgccg ggcgggcagg gcaacaagtc cggcggccaa
     2821 cgcgaattcg tgccggtgct ggcacgcgct gcggtagcag cgggtgtcgc gggtgtgttc
     2881 atggaaaccc atccgaaacc cgaggaagcg ctgtccgatg gcccgaatgc gtggccgttg
     2941 gggaagatgg aagcgctgct ggcgacgctg aaagagctgg acggtgcgac caagcgtgcc
     3001 ggttttcttg aagcggcgca gcaataaaaa ctgtcgtcat tccggacgcc gcgcagcggc
     3061 gatccggaat ctgcttttag gatggacaag agcagattcc gggttccgcg cttcgcgcgg
     3121 ccccggaatg acgaagaatt gtcaatcgac ttgaagaaac ggatatgact acgacaatca
     3181 aaaccatcca cgctcgcgaa gtcctcgaca gccgcggcaa ccctacactg gaagctgaag
     3241 tcacgctggc agacggtgcg ttcggacgcg
//
LOCUS       DASSVL010000429         2899 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_518536, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000429 DASSVL010000000
VERSION     DASSVL010000429.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2899)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2899)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2899
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_518536"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..709)
                     /locus_tag="VFM52_07545"
     CDS             complement(<1..709)
                     /locus_tag="VFM52_07545"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF014566.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0071586 - CAAX-box protein processing
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family intramembrane glutamic
                     endopeptidase"
                     /protein_id="HET8765060.1"
                     /translation="MDSPLPPLPAAPPRPLDLRGAAGLILFYFALQLTVGFVANVAAG
                     VGVALGHGSPDLLASDNALRSGLAIVVVTGAALPTLWLAHRMWPALWRQARPPGLGFV
                     RPANLAYLTLAIAFGFVLPLAAGRLTELLAHGHAVPQDVKQLGAAADTAWRTALAVVV
                     VTLGPITEELLFRGLLLSALLRRMRPFAAVLVSALVFAAAHLPDLHWLWYGVPNLALL
                     GIAFAWLRLRSGSLWPAI"
     gene            875..2428
                     /locus_tag="VFM52_07550"
     CDS             875..2428
                     /locus_tag="VFM52_07550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017462757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family protein"
                     /protein_id="HET8765061.1"
                     /translation="MFVFDWLADPAAWAGLLTLVVLEIVLGIDNLVFIAILADRLPPS
                     ERDRARLSGLGLALVMRLLLLAAVAWLARLTTPVVSGFGVALSWRDIILLLGGAFLLF
                     KATLELHERLEAGDDHAGAKRGEARFWLVVAQIVALDAVFSLDSVITAVGMVSQLSVM
                     MVAVVIAMILMISASKPLTDFVNARPTVVILCLSFLLMIGFSLIAEGFGFHIPKGYLY
                     AAIGFSIMIEAFNQTMRRNRRRSLFGSARNLRDRTAQTVLRLLGAGSVDDEAPTPAAD
                     APAPVASAVFGKDELAMVQGVLDLAHRPVRSIMTPRPEISWIDPHEDAGKLREEVTAS
                     SHHWLPVAGDDLDQLVGVATSRDLLASLLEHGYIDVERVVRKPMTVLESLSVLRLIEE
                     FRRSSLQVALVVDEYGSVLGMVTPADVLGVIAGEFPDEEGGDPAAVQESDGTWLLDAS
                     LDLRRVEHLLGRRLPSEEGFSTLAGYVLEHLGRLPAVGDRLVSEGLAFEVTAMDGARI
                     DRLRVRPEA"
     gene            complement(2436..2831)
                     /locus_tag="VFM52_07555"
     CDS             complement(2436..2831)
                     /locus_tag="VFM52_07555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008214895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MAPEG family protein"
                     /protein_id="HET8765062.1"
                     /translation="MLEQLPAIVTLLAILLLFGTAASVGRARVRYGIKAPATSGHPAF
                     ERAFRVQMNTLEASVLFLPTLWLAAHFGLGGWAGIAGLAWIVGRVWYALSYLRDPARR
                     EGGFALGMLAWAVTLVLAFVGTGRALLGA"
BASE COUNT          438 a         1014 c         1044 g          403 t
ORIGIN      
        1 cgatcgccgg ccacagcgag cccgagcgca ggcgcagcca ggcgaaggcg atgccgagca
       61 gggcaaggtt cggcaccccg taccacagcc agtgcaggtc gggcaggtgg gccgccgcaa
      121 acaccagcgc gctcaccagc acggcggcga acgggcgcat ccggcgcagc agcgcggaca
      181 gcagcaggcc gcggaacagc agctcctcgg tgatcggccc gagcgtcacc accaccaccg
      241 ccagcgcggt gcgccacgcc gtgtcggcgg cggcgccgag ctgcttcacg tcctgcggca
      301 cggcatggcc gtgcgccagc agctcggtca gccgcccggc ggccagcggc aggacgaagc
      361 cgaacgcgat cgcgagcgtg agataggcga ggttggccgg ccgcacgaaa cccaggccgg
      421 gcggccgcgc ttgccgccac agcgccggcc acatgcgatg cgcgagccac agcgtgggca
      481 gcgcggcgcc ggtcacgacg acgatggcca gcccgctgcg cagcgcattg tcgctcgcga
      541 gcagatccgg gctgccgtgg ccgagcgcca cgcccacccc ggccgcgacg ttggcgacga
      601 accccaccgt cagttgcagc gcgaaataga acaggatcag gccggccgcg ccgcgcaggt
      661 cgaggggccg cggcggcgcg gcaggcaggg gtggaagcgg ggaatccatc ggggctcggt
      721 aacggcgtgg cgtgcggcgc cgtgcgggcg tccagccgcc aacttagcgg tgccgccacc
      781 cgccgcgcaa tccgccgttc ggcacggtgg ccccgccggc tgcctgtata gtgggcaacc
      841 ctttgtggag aatcgtggcg ccccggcgct ccccatgttc gtcttcgact ggctggccga
      901 tccggctgcc tgggcaggcc tcctcaccct cgtggtgctg gagatcgtgc tcggcatcga
      961 caacctcgtg ttcatcgcga tcctcgccga caggctgccg cccagcgagc gcgaccgggc
     1021 gcggttgtcc ggcctcggac tggcactggt catgcgcctg ctgctgctcg cggcggtcgc
     1081 atggctggcg cggctgacga cgccggtggt gagcggcttc ggggtggcgc tgtcgtggcg
     1141 cgacatcatc ctgttgctgg gcggcgcctt cctgctgttc aaggccacgc tcgaactgca
     1201 cgagcggctc gaagccggcg acgaccacgc cggcgccaag cgcggcgagg cgcggttctg
     1261 gctggtggtg gcccagatcg tcgcgctcga cgccgtgttc tcgctggatt cggtgatcac
     1321 cgcggtgggc atggtcagcc agttgtcggt gatgatggtg gccgtggtca tcgcgatgat
     1381 cctgatgatc agcgcgagca agccgctgac cgacttcgtc aacgcgcggc cgacggtggt
     1441 catcctgtgc ctgtcgttcc tgctgatgat cggcttcagc ctgatcgcgg aaggtttcgg
     1501 cttccacatc cccaagggct acctgtacgc cgcgatcggg ttctcgatca tgatcgaggc
     1561 gttcaaccag accatgcgcc gcaaccgccg gcgcagcctg ttcggcagcg cacgcaacct
     1621 gcgcgaccgc accgcgcaaa ccgtgctgcg cctgctcggc gcgggcagcg tcgacgacga
     1681 ggcgccgacg ccggcggccg acgcgccggc gccggtcgcc agcgcggtgt tcggcaagga
     1741 cgagctggcg atggtgcagg gcgtgctcga cctcgcgcat cgcccggtgc gctcgatcat
     1801 gacgccgcgt ccggaaatca gctggatcga cccgcacgag gatgccggca agctgcgcga
     1861 ggaagtcact gcatccagcc accactggct gcccgtcgcc ggcgacgatc tcgaccagct
     1921 ggtcggcgtc gccacctcgc gcgacctgct cgcgagcctg ctcgaacacg gctacatcga
     1981 cgtcgagcgc gtggtgcgca agccgatgac ggtgctcgaa tcgctctccg tgctgcgcct
     2041 gatcgaggag ttccggcgct cgtcgctgca ggtggcgctg gtggtggacg aatacggcag
     2101 cgtgctcggc atggtcaccc cggccgacgt gcttggcgtg atcgccggcg agtttccgga
     2161 cgaggaaggc ggcgacccgg ccgcggtgca ggaaagcgac ggcacctggc tgctggacgc
     2221 cagcctcgat ctgcgccggg tcgaacacct gctgggtcgc cggttgccga gtgaagaggg
     2281 cttttccacc ttggccggct acgtgctcga acacctcggc cgactgccgg ccgtcggtga
     2341 tcgcctggtg agcgaaggcc ttgccttcga ggtgaccgcg atggacggcg cgcgcatcga
     2401 ccgcctgcgc gtacgcccgg aagcctgatc ctgattcacg cgccgagcag cgcgcgcccg
     2461 gtgccgacga acgccagcac cagcgtcacc gcccacgcca gcatgccgag cgcgaaaccg
     2521 ccctcgcgcc tggccgggtc gcgcaggtag gacagcgcat accagacgcg gccgacgatc
     2581 cacgccagcc cggcgatacc agcccagccg ccgagcccga agtgcgcggc gagccacagc
     2641 gtcggcagga acagcacgct ggcctcgagc gtgttcatct gcacccggaa cgcgcgttcg
     2701 aacgcgggat ggccgctggt ggccggtgcc ttgatgccgt agcgcacgcg cgcgcggccg
     2761 acgctggcgg cggtgccgaa cagcagcagg atggcaagca gggtgacgat ggcgggaagt
     2821 tgttcgagca tgaccggcct cactcagtga agacggcact gtagcggcag cacggcgtcg
     2881 ggcggtatcg tcgcgtggc
//
LOCUS       DASSVL010000430         4709 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_518541, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000430 DASSVL010000000
VERSION     DASSVL010000430.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 4709)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4709)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4709
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_518541"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(37..1800)
                     /locus_tag="VFM52_07560"
     CDS             complement(37..1800)
                     /locus_tag="VFM52_07560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007808363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HET8765063.1"
                     /translation="MKVGGLLRWRMAGLLLAMVVIVALPYLAAQVMAAETQQANAWLD
                     HASEVKALTYRIGYVVRDSEAATYQLLLGDGGTEVEARAMAVGDKVPPMLARLRQLTL
                     ADASQQTRVGELESVVTGRIALVRQALARLHRGETAAAQQSLHDAGDLFHLQTLVDDI
                     AHTEDELLVEHTHDLAQRVRRSQLVLGFTALAQLLLLVIVVVASEQQIGKRRLAETRE
                     GRAVLRSQMILQAVREPIALFGEHFRTLLVNTAFAEMYGLDVHQRGAQPALPEIGAVA
                     WSDGALLQRLNDVLLRDRELWDYELVQRTSDGVDRHVLINARRIQQQEHDGQVLLVTV
                     SDITARSLAEDKVNELNHQLEGKVAQISDVNRELEAFSYSVSHDLRAPLRHIAGFSRK
                     LGDHLGARVDATSAHYLDVIASSAQHMAQLIEDLLVFSRLGRGAMRLQPVDMQSLVEE
                     ARALSDADASGRHITWSIAPLPIVVGDENMLRTVWQNLIGNALKYTGKREVAEIGVGV
                     ERGRNDDYVFTVSDNGAGFDMQYGGKLFGVFQRLHRASDFPGTGIGLANVKRVLDRHG
                     GRIWAEAEVGKGATFYFWLPS"
     gene            complement(1964..3721)
                     /locus_tag="VFM52_07565"
     CDS             complement(1964..3721)
                     /locus_tag="VFM52_07565"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HET8765064.1"
                     /translation="MNRWVCAMLLAAMTLAGGARAQIEIHPLPDAAPATPVPLGGHAL
                     TAADAGAWIDAQLASALRDHAITGAAVAIVVDGEAKVLKGYGRDGDGHPIDGQATRFA
                     LGNASATFTWTALMQLAAAGKVDLDADVGRYLGTSSSPRGGRPPTLRQLMTHTAEFTD
                     TGNAQPADAACVMRPAVSDVAPSWSRCDAALAARVVAHVSGMDLATYVARWVFEPIGM
                     PGAAFGNPAGDATATAPAMGNYLAALLPGNRPIDAAALPPAEARQMLDASVPLAPGVP
                     GMALGWRRFDRNGWQAVGLASPTPAGSVLLALVPDSRAGLFIALDGRGAGALGTSLFD
                     GFMGRYFPPRPSVAPARPATAVADAARLAGSYQSSRAVAGGFRAIAGLFGQARITAAG
                     GEIITRDLAGMTGVHRWRETVPSRWQGVDGHGYLGVAVHDGRVQHVAVRSLAPPEVWR
                     PVPRWASARWNLPLLWATLALLAVLTLAWPLVAWRGPRDAAWRWLQGAHAAALVQLGC
                     AVGWAWVARLPDAPALAVRGVQVLGVAALAGVVVAAAGTWQAWRRPCRAWWRLDSGLL
                     LAGGLAGAWFILAFGLLAH"
     gene            complement(3847..4329)
                     /gene="ssb"
                     /locus_tag="VFM52_07570"
     CDS             complement(3847..4329)
                     /gene="ssb"
                     /locus_tag="VFM52_07570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008434513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003697 - single-stranded DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HET8765065.1"
                     /translation="MARGVNKVILVGNLGNDPDIRHTASGMAVASLSVATAERRKDQS
                     GEWQDHTEWHRVKLFGKTAEVAGEYLRKGRQVYIEGSLRTSKYTDKNGVERYSTEIVA
                     NDMQMLGGGGGEGGGSYQRERPQGGSAGGYGGGSRGGNAPAPAAPANNGGFEDDDIPF
                     "
     gene            complement(4477..>4709)
                     /locus_tag="VFM52_07575"
     CDS             complement(4477..>4709)
                     /locus_tag="VFM52_07575"
                     /inference="COORDINATES: protein motif:HMM:NF015057.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8765066.1"
                     /translation="ALLASRVTATHPYRQWIAAYADPAFAAASQRAGELVDRAVAEEG
                     AAAARAQAAYLAACRHEWRFWDAAWRQETWQP"
BASE COUNT          749 a         1766 c         1538 g          656 t
ORIGIN      
        1 gggcaggatg cccgtgctac gaaaggctac ggaaggctac gaagggagcc agaaataaaa
       61 cgtcgcgccc ttccccactt ccgcctccgc ccagatccgg ccgccgtggc ggtcgagcac
      121 gcgcttgacg ttggccaggc cgatgccggt gccgggaaag tcggaggcgc ggtgcaggcg
      181 ctggaacacc ccgaacagct tgccgccata ctgcatgtcg aaaccggccc cgttgtcgct
      241 cacggtgaac acgtagtcgt cgttgcggcc gcgctcgacc ccgacgccga tctcggcaac
      301 ctcgcgcttg ccggtgtatt tcagcgcgtt gccgatcagg ttctgccaca ccgtgcgcag
      361 catgttctcg tcgccgacca cgatcggcag cggtgcgatc gaccaggtga tgtgccgccc
      421 gctggcatcg gcgtcgctca gcgcgcgcgc ctcctccacc agcgattgca tgtcgaccgg
      481 ctgcaggcgc atggcgccgc ggccgaggcg cgagaacacc agcaaatcct cgatcaactg
      541 cgccatatgc tgcgccgagc tggcgatgac atcgagatag tgggcgctgg tcgcgtcgac
      601 ccgggcaccg aggtggtcac cgagcttgcg cgagaacccg gcgatgtggc gcaacggcgc
      661 gcgcaagtcg tgcgacaccg agtagctgaa cgcctccagt tcgcggttga cgtcggaaat
      721 ctgcgccacc ttgccttcga gctggtgatt cagctcgttg accttgtcct ccgccagcga
      781 gcgcgcggtg atgtcgctca cggtgaccag cagcacctgg ccgtcgtgct cctgctgctg
      841 gatgcggcgc gcattgatca gcacgtggcg gtcgacgccg tcggacgtgc gctgcaccag
      901 ctcgtaatcc cacagctcgc gatcgcgcag tagcacgtcg ttcaaccgct gcagcagcgc
      961 gccgtcgctc cacgcgacgg caccgatctc cggcagcgcc ggctgtgcgc cgcgctggtg
     1021 cacgtcaagg ccgtacatct cggcgaaggc ggtgttgacc agcaaagtgc ggaaatgctc
     1081 gccgaacagc gcaatcggct cgcgcaccgc ctgcaggatc atctgcgagc gcagcaccgc
     1141 gcggccttcg cgggtctccg ccagccgtcg cttgccgatc tgctgctcgg aggcgacgac
     1201 gacgatcacc agcagcagca gctgtgccag cgcggtgaac ccgagcacca gctggctgcg
     1261 tcgcacccgc tgcgcaagat cgtgggtatg ttcgaccagc aattcgtcct cggtgtgcgc
     1321 gatgtcgtcg accagtgtct gcaggtggaa caaatcgccg gcgtcatgca gtgactgctg
     1381 cgccgccgcg gtctcgccgc ggtgcaggcg cgccagtgcc tgccgcacca gcgcgatgcg
     1441 gccagtgacc acgctttcga gttcgccgac ccgggtctgc tgggatgcgt ccgccagggt
     1501 caactggcgc aggcgcgcca gcatcggcgg caccttgtcg ccgactgcca ttgcccgggc
     1561 ttccacctcc gtgccgccat cgccaagcag gagctgataa gtggccgcct cgctgtcgcg
     1621 caccacgtag ccgatgcgat aggtcaacgc cttgacctcg ctggcatggt cgagccatgc
     1681 gttggcctgc tgcgtctcgg ccgccatgac ctgcgccgcc aggtacggca gcgcgacaat
     1741 gacgaccatc gccagcaaca agccggccat gcgccagcgc aacaggcccc cgactttcat
     1801 tggactggtg acatcggcag ctctcacgaa accgcacccg ttccctgcgg gtgcctaggc
     1861 attctcgcat gtttgccggc acaggccagt gcagcgccac cgcccccagc caggccctcc
     1921 ccggggctgg tcggcctggc ccggggcacg gccacaccgc cgatcaatgc gccaacagcc
     1981 cgaaggcaag gatgaaccac gctcctgcga gaccgccggc cagcagcaac ccgctgtcca
     2041 gccgccacca ggcacgacac gggcgacgcc aggcttgcca cgtccccgcg gcggccacca
     2101 ccacgccagc cagcgccgca acgcccagca cctgcacgcc acgcacggcc aaggccggcg
     2161 cgtccggaag ccgggctacc catgcccagc cgacggcaca ccccagctgc acgagggcgg
     2221 cggcgtgggc gccctgcaac cagcgccacg cggcgtcacg cggcccgcgc cacgcaacca
     2281 gcggccacgc cagcgtgagg acggccagca gcgccagcgt cgcccacagg agtggcaggt
     2341 tccagcgtgc cgaggcccag cgcggcaccg gccgccacac ttccggcggc gccagcgaac
     2401 gtaccgcgac atgctgcacc cgcccatcgt ggacggcgac cccgaggtat ccgtggccgt
     2461 caacaccctg ccagcgcgac gggaccgtct cgcgccagcg gtggacgccc gtcatgccgg
     2521 caaggtcacg ggtgatgatt tccccgcctg cggcagtaat gcgcgcctgg ccgaacagcc
     2581 cggcaatcgc gcggaaaccg ccagccacgg cgcggctgga ctggtagctg ccggccagcc
     2641 gcgccgcatc cgcgacggcc gtcgccggcc gcgccggtgc gacgctcggc cgcggcggga
     2701 aatagcgacc catgaacccg tcgaacagcg acgtgcccag cgcgccagcg ccgcgcccat
     2761 caagtgcgat gaacaggccc gcacgggaat ccggcaccag cgcgagcagc acgctgcctg
     2821 ctggcgtggg tgacgccagg ccgacggcct gccagccgtt gcgatcgaac cgacgccagc
     2881 ccagcgccat gcccggcacg cccggcgcca gtggcacgga ggcgtccagc atttgccggg
     2941 cctccgccgg cggcaaagcc gccgcgtcga tcggccgatt gcccggcagc agcgccgcga
     3001 ggtaattccc catggctggt gcggtggccg tggcgtcacc cgcggggttg ccgaacgcgg
     3061 caccgggcat gccgatcggt tcgaacaccc accgcgccac gtatgtggcg agatccatgc
     3121 cggacacgtg ggccacgacc cgcgcagcca gcgccgcgtc gcaacgcgac cacgacggcg
     3181 ccacatccga cacggccggc cgcatgacgc acgcagcatc ggccggctgc gcgttcccgg
     3241 tatcggtgaa ttccgcggtg tgcgtcatca actgccgcag cgtgggcggt ctgccaccac
     3301 gcggtgacga cgaggtgccg agatagcggc cgacatcggc atcgagatcg accttgccag
     3361 ccgccgcgag ctgcatcagc gccgtccagg tgaaggtggc ggacgcatta cccaacgcaa
     3421 aacgcgtggc ctgcccgtcg atcgggtggc catcgccgtc acgcccatag cccttcagca
     3481 ctttggcttc gccatccacg acgatcgcca ccgcagcgcc ggtgatcgca tggtcgcgca
     3541 gcgccgaagc aagctgcgcg tcgatccacg caccggcatc cgccgccgtc agcgcatgcc
     3601 cgcccagcgg caccggcgtg gccggcgcag catccggcag cggatgaatc tcgatctgcg
     3661 cacgggcgcc gccagccagg gtcatcgcag ccaacagcat cgcgcacacc caacggttca
     3721 tcgtcgctcc cagccggttc cagtgcccca tcctgccgcg cgccaccgat gcacgacatg
     3781 aacggcccgg caaaaacgcc gaaggcccgc agtgcgggcc ttcgggcagg acacgggaag
     3841 acgggctcag aacgggatgt cgtcgtcctc gaagccccca ttgttcgccg gtgccgccgg
     3901 cgccggggcg ttgccgccgc gcgacccgcc gccgtagcca cccgcgctgc cgccctgcgg
     3961 gcgttcgcgc tggtagctgc caccaccttc gccgccgcca ccgccgagca tctgcatgtc
     4021 gttggcgacg atctcggtcg aatagcgttc gacaccgttc ttgtcggtgt acttgctggt
     4081 gcgcagcgaa ccttcgatgt acacctgccg gcccttcctc aagtactcgc cggcgacctc
     4141 ggcggtcttg ccgaacagct tcacccggtg ccattcggtg tggtcctgcc actcgccgga
     4201 ctgatccttg cgacgctccg cggtggcgac gctgagcgac gccaccgcca tgccgctggc
     4261 ggtgtggcga atgtcgggat cgttgccgag attgccgacg aggatgacct tgttgacgcc
     4321 acgtgccatg ggaaatttcc ttcggatgcc ggccgcaggc aagcctgccg cccggttgga
     4381 ccaggcgtca tcttaccctg tccccggcgc cgcgcgtgtc ggcgttccgc ccccggcatt
     4441 gtcggcatac gcgggccacc ggcgtggcgc caccagctac ggctgccagg tctcctgccg
     4501 ccacgcggcg tcccagaagc gccactcgtg gcggcacgcg gccaggtacg ccgcctgggc
     4561 gcgcgccgct gccgcgccct cttccgccac cgcacggtcg accagctcgc cggcccgctg
     4621 gctggcggcg gcaaacgccg ggtcggcgta ggcggcgatc cactgccgat acggatgcgt
     4681 ggcggtgacc cgcgacgcca gcagggcgc
//
LOCUS       DASSVL010000431         2388 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_702248, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000431 DASSVL010000000
VERSION     DASSVL010000431.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2388)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2388)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2388
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_702248"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..432
                     /locus_tag="VFM52_07580"
     CDS             <1..432
                     /locus_tag="VFM52_07580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015448036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC family protein"
                     /protein_id="HET8765067.1"
                     /translation="VRFHRVLTAPPERVYRAFLDAAAVAKWLPPDGFTCTVHELDARV
                     GGRYRMSFTHFGSGHGHSFGGTYLELVPNQRIVHDDRFDDPSLPGTMVTTIALREVSC
                     GTEVQIEQTGIPDAIPTEQCHLGWQESLTLLERLVEPALPG"
     gene            470..949
                     /locus_tag="VFM52_07585"
     CDS             470..949
                     /locus_tag="VFM52_07585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007080999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HET8765068.1"
                     /translation="MMSKNTICLWYDGAALDAATFYAQTFPDSAVGKVYRAPGDYPAG
                     KQGDVLTVEFTVMGIPCLGLNGGPGVPHTDAFSFQVATDDQAETDRLWNAIIDHGGQA
                     SACGWCKDRWGVSWQITPRALVDAIGDPDPAVARRAFEAMMTMTKIDIAAIEAARRG"
     gene            1006..1661
                     /locus_tag="VFM52_07590"
                     /pseudo
     CDS             1006..1661
                     /locus_tag="VFM52_07590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017461284.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
     gene            complement(1737..2339)
                     /locus_tag="VFM52_07595"
     CDS             complement(1737..2339)
                     /locus_tag="VFM52_07595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017463810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HET8765069.1"
                     /translation="MEAIAGFVIAAISHLHYLGVVLMMAIESACIPLPSEVTMPFAGF
                     LAFKGELDLWWVSVAGAAGCVLGSWVAYAVGAWGGRPLVERYGKYLLLSKHDLDLADR
                     WFARHGELTIFVARLLPVVRTFIAFPAGVARMPLWRFTLYTFLGSLPYCWFLAWIGLR
                     LGQHWDTLGTWFHRFDTAIGIAILLLCAAYVWRHVRNVRA"
BASE COUNT          412 a          833 c          810 g          333 t
ORIGIN      
        1 gtccgcttcc accgtgtcct gaccgccccg cccgagcgcg tctatcgcgc cttcctcgat
       61 gccgccgcag tcgccaagtg gctgccgccc gacggcttca cctgcaccgt gcacgagctc
      121 gacgcgcggg tcggcggccg ctaccgcatg agcttcaccc atttcggcag tggccatggc
      181 cacagcttcg gcggcaccta cctggaactg gtgccgaacc agcgcatcgt ccacgacgac
      241 cgcttcgacg atcccagcct gcccggcacc atggtcacca ccatcgccct gcgcgaggtg
      301 agctgcggca ccgaggtgca gatcgagcag accggcatcc ccgacgcgat ccccaccgaa
      361 cagtgccacc tcggctggca ggagtcgctg accctgctgg aacggctggt ggaaccggcg
      421 cttccgggct gagccgccgt tgccgatcgc ccacacctgg agagttccga tgatgagcaa
      481 gaacacgatt tgcctctggt acgacggcgc cgccctcgac gccgcgacgt tctatgcgca
      541 gaccttcccg gacagcgccg tgggcaaggt gtatcgcgca cccggcgatt acccagcggg
      601 caagcagggc gacgtgctga cggtggagtt cacggtcatg ggcatcccgt gcctgggctt
      661 gaacggcggc cccggcgtgc cgcacaccga tgcgttctcg ttccaggtcg ccaccgacga
      721 ccaggctgaa accgaccgcc tgtggaacgc gatcatcgac cacggcggcc aggccagcgc
      781 ctgcggctgg tgcaaggacc ggtggggcgt gtcgtggcag atcaccccgc gcgccctggt
      841 ggatgcgatc ggcgaccccg accccgccgt agccaggcgc gcgttcgagg ccatgatgac
      901 gatgacgaag atcgacatcg cggcgatcga ggcggcccgg cgcggttagc ccgcggcggg
      961 gttccacgac cgaccccgcc atcggcctgg ccatctggag tccccatgat tcccaccatc
     1021 accgccttcg aaagctcgcc cgaccgtggc cagggctcgc gcgcgacatg cgcgtgcgct
     1081 gggcgctgga agaagtgggc cagccctacg acgtccgcct ggtttcgttc aaggcgatga
     1141 aggaacccgc gtatcgcgcg ctgcacccgt tcgggcagat tcccacctac gaggaaggcg
     1201 acctcgtgct gttcgagtcg ggcgccatcg tgctgcacat cgcgcagcac cacgcgggcc
     1261 tgctgccgga tgaggcgaac gcgcgggcgc gcgcgattgc atggatgttc gccgcgctca
     1321 acacggtgga gccgcccatc ctcgaactgc agaccgccaa gttcgcggaa ggcgaccggc
     1381 cgtggaccgc ggaacgcctg ccgctcgtca aggaccgcat ccgctatcgg ctgggcgagc
     1441 ttgccgttcg cctgggcgat gccgactggc tcgacggcgc attcagcgcg ggcgacctga
     1501 tgatggtgca cacgctgcag cggctgaagc cctcgggcct gttggccgaa tacccgagcc
     1561 tcgccgccta cgttggccgg ggcgaagcac ggccggccta tcagcgcgcc tttgccgccc
     1621 agctggcagt gttcaccggc caggcgccgg gtggccgata ggagtccggc ttccggcgac
     1681 ggcgcgcaac gtgacgacgc gcaggggcaa acgccacgct gacgggaagg cgcgtctcag
     1741 gcccgcacgt tgcgcacgtg ccgccacacg taggccgcgc acagcagcag gatggcgatg
     1801 ccgatcgcgg tgtcgaagcg gtggaaccag gtgccgaggg tgtcccagtg ctggccgagg
     1861 cgcagcccga tccaggcgag gaaccagcag tacggcagcg aaccgaggaa ggtgtagagg
     1921 gtgaagcgcc acaacggcat gcgtgccacg ccggcaggga aggcgatgaa ggtgcgcacc
     1981 accggcagca agcgggcgac gaagatggtg agctcgccgt ggcgggcgaa ccagcggtcg
     2041 gcgagatcga gatcgtgttt cgacagcagc aggtacttgc cgtagcgctc gaccagcggt
     2101 cggccgcccc atgcgcccac ggcgtaggcc acccacgagc cgagcacgca gccggcggcg
     2161 ccggccacgc tgacccacca caaatccagc tcgcccttga acgcgaggaa gccggcgaac
     2221 ggcatggtga cttcggaggg cagcggaatg caggcgctct cgattgccat catcagcacc
     2281 acgccgagat agtgcaggtg cgagatcgcg gcgatcacga agccagcgat cgcctccatg
     2341 agttgtccca gcaagatgca tgtcccggtg agtcgacgcg gcattatc
//
LOCUS       DASSVL010000432         2006 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_617500, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000432 DASSVL010000000
VERSION     DASSVL010000432.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2006)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2006)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2006
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_617500"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1329
                     /gene="der"
                     /locus_tag="VFM52_07600"
     CDS             <1..1329
                     /gene="der"
                     /locus_tag="VFM52_07600"
                     /EC_number="3.6.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007080975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTPase Der"
                     /protein_id="HET8765070.1"
                     /translation="SRDALVADLPGVTRDRHYGICRLGARPFMVVDTGGLSGRDDELD
                     ALTAQQVRVAIDEADVLVLVLDARDGLLPHDRSILDELRRTGKPVVVAVNKTDGLDEH
                     TAMADFAALGIARTLPLAAAHNRGVDAAVATLLPLLPEDADAESPAADDDSIRVAIVG
                     RPNAGKSTLVNRLLGEDRLVVSATAGTTRDPIKVALERDGRRYTLIDTAGVRRRARVE
                     ETVEKFSVIKALQSIAVAQVVVLLVDARENLAEQDLTLIGQVLDEGRALVIALNKWDG
                     LDAYQREQCREALSRRLQFVDWARQVTISALHGSGLRELMSAVVRAHASANYQLGSAD
                     LTRTLEKAYQAYQPPLVRGHAPKLRFAHPGGSNPPTIVIHGTRTKHIAPAYQRYLENF
                     FRKRYKLEGTPIRILFREGENPYAGKKNVLTEGQQRKRQRMIREIKRRKK"
     gene            complement(1344..1907)
                     /locus_tag="VFM52_07605"
     CDS             complement(1344..1907)
                     /locus_tag="VFM52_07605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017460767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HET8765071.1"
                     /translation="MPPPAAMVVLDDGRLRLSPWQATDIEGLHQAVQESVAEVGRWLP
                     WCTRDYDLAQAADWVAASQAAWASGAACAFAIRANADRRLLGGCGLGELDRKHRVGNL
                     GYWVRSSAHGGGVATAAARLVAAFGFHQLGLGRIEIATLTDNLASRRVAAKLGAQYEG
                     VARARLWAWGCAHDAAMHGLVPQDLGA"
BASE COUNT          329 a          725 c          673 g          279 t
ORIGIN      
        1 agccgcgacg cgctggttgc cgacctgccc ggggtcacgc gcgaccgcca ttacggtatt
       61 tgccgcctcg gcgcccggcc gttcatggtg gtcgataccg gcggcctgtc cggccgtgac
      121 gacgaactgg acgccttgac cgcgcagcag gtgcgggtgg cgatcgacga agccgacgtg
      181 ctggtgctgg tgctggacgc gcgcgacggc ttgctgccgc atgatcgcag catcctcgac
      241 gaactgcggc gcaccggcaa gccggtcgtg gtggcggtca acaagaccga cggcctcgat
      301 gaacacacgg ccatggccga ctttgcggcg ctcggcatcg cgcgcacgct gccgttggcg
      361 gcggcccaca accgcggcgt cgacgccgcg gtcgcgacgc tgttgccgct gctgccggaa
      421 gatgccgacg ccgagtctcc cgccgcggat gacgacagca tccgggtcgc catcgtcggt
      481 cgcccgaatg ccggcaagtc gacgctggtc aaccgcctgc tcggcgagga ccgcctggtg
      541 gtttccgcca ccgcgggcac cacgcgcgat ccgatcaagg tggcgctcga gcgcgatggc
      601 cggcgctaca ccctgatcga caccgccggc gtgcgccgcc gcgcgcgggt cgaggaaacc
      661 gtcgagaaat tcagcgtcat caaggcactg cagtcgatcg ccgtggcgca ggtcgtggtg
      721 ctgctggtgg atgcccgcga aaacctcgcc gagcaggatc tgaccctcat cggccaggtg
      781 ctggacgaag gccgcgcgct ggtgatcgcg ctgaacaagt gggatggcct cgacgcctac
      841 cagcgcgagc aatgccgtga ggcgttgtcg cgccggctgc agttcgtcga ctgggcgcgg
      901 caggtgacca tctcggcgct gcatggctcc ggcctgcgcg agctgatgtc cgcggtggtg
      961 cgcgcgcacg cctcggccaa ctaccagctc ggttccgccg acctcacgcg cacgctcgag
     1021 aaggcgtacc aggcctacca gccgccgctg gtgcgcgggc atgcgccgaa gctgcggttt
     1081 gcccaccccg gtggcagcaa cccaccaacc atcgtcatcc acggcacccg caccaagcac
     1141 atcgcgccgg cctaccagcg ctacctcgag aacttcttcc gcaagcgcta caagctcgaa
     1201 ggcacgccga tccgcatcct gttccgcgag ggggagaacc cctacgccgg caagaagaac
     1261 gtgctgaccg aaggccagca gcgcaagcgc cagcggatga tccgcgagat aaagcggcgg
     1321 aaaaagtagc cgcgctggcg cgctcaggca ccgagatcct gcggcaccaa gccgtgcatg
     1381 gcggcatcgt gcgcacatcc ccacgcccac aggcgtgccc gcgcaacgcc ttcgtattgc
     1441 gcgccgagct tggccgccac gcgccggctg gcgaggttgt cggtcagggt ggcgatctcg
     1501 atgcggccaa gcccgagctg gtggaagccg aaggcggcca ccagtcgtgc ggccgcggta
     1561 gccacgccac cgccgtgcgc cgagctgcgc acccagtagc cgaggtttcc cacgcgatgc
     1621 ttgcgatcga gctcgccgag cccgcacccg ccgagcaggc ggcgatccgc gttcgcgcgg
     1681 atcgcgaacg cgcaggccgc gccggacgcc cacgccgcct ggcttgccgc cacccagtcg
     1741 gccgcctgcg ccaggtcata gtcgcgcgtg caccacggca gccagcgtcc gacttcggcc
     1801 accgattcct gcaccgcctg atgcaagccc tcgatatccg tcgcttgcca cggcgacaac
     1861 cgcaggcggc catcgtcgag cacgaccatc gcggcagggg gcggcatcga catggacgtc
     1921 catttgtgcg ggcttggcgg agccacgata atggcgcgac ttttcgcccg gaaccaccat
     1981 gactgcacgc atactcgacg gcaagc
//
LOCUS       DASSVL010000433         4059 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_800762, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000433 DASSVL010000000
VERSION     DASSVL010000433.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 4059)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4059)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4059
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_800762"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..246
                     /locus_tag="VFM52_07610"
     CDS             <1..246
                     /locus_tag="VFM52_07610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003486257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HET8765072.1"
                     /translation="MARELARFGIRVATIAPGIFWTPMVDGMPPQVQESLGASIPFPS
                     RLGKPEEFAATVAFILTNRYVNGEVIRLDGAVRLAAK"
     gene            309..872
                     /gene="yeiP"
                     /locus_tag="VFM52_07615"
     CDS             309..872
                     /gene="yeiP"
                     /locus_tag="VFM52_07615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008215758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA];
                     GO_process: GO:0043043 - peptide biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P-like protein YeiP"
                     /protein_id="HET8765073.1"
                     /translation="MKASDVKKGNVVEHDGTVYQVRDIERSAPTARGGNVTFRFTLYS
                     IPGGRKYDLSLRADDDLKEMELVRRAANFSYKDGDAFVFMDAEDYTQYILGPELIGDS
                     AGYIVEELEGYYVQLIDDAPVSLQVPTSVLLTVADTAPELKGASATKRTKPATLDTGI
                     EIQVPDYIGTGEKVWVNTLTGEFAGRA"
     gene            984..1502
                     /locus_tag="VFM52_07620"
     CDS             984..1502
                     /locus_tag="VFM52_07620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008435218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8765074.1"
                     /translation="MPSLRIPFLAAALAAGLFAAATASAADVSMAGGSVRFSTPDGWT
                     EILETDGDPEIRAFQVPDPSPTGHTVLARVTVTVHAMPDPQAFAAWVGEATAKAAALP
                     GYQPAKAATPDSASYTAHESGVTVSYREMYWYHAGHAIQLRCLRPQQSQAGAAWGAAF
                     DRGCAAIAARLK"
     gene            1506..2789
                     /gene="kynU"
                     /locus_tag="VFM52_07625"
     CDS             1506..2789
                     /gene="kynU"
                     /locus_tag="VFM52_07625"
                     /EC_number="3.7.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007804800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030429 - kynureninase activity [Evidence
                     IEA];
                     GO_process: GO:0019441 - tryptophan catabolic process to
                     kynurenine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="kynureninase"
                     /protein_id="HET8765075.1"
                     /translation="MSTPYAATATWAAAADAADPLRAFRDEFLIPPHAGGDSVYLCGN
                     SLGLQPRGVRRVLDAELASWAERAVEGHFKGPSPWLGYQATVRDGIAEVVGAQPSEVV
                     AMNTLGVNLHLLMASFYRPTRERPAILLEAGAFPTDRYALESQVRFHGFDPADALIEL
                     APDAPHGTLSLAAIERALDEHGARIALVLLPGVQYRTGQAFDLKAITALAHRHGCMAG
                     FDLAHAVGNLPLQLHDADADFAVWCHYKYLNAGPGAVGGAFVHARHARGDLPRLAGWW
                     GNDEATRFLMRPTFQPTPGAEGWQVSNPPILALAPLRASLELFQRAGMPALAEKSRQL
                     TGYLEWLVDTQLADVLEVVTPRAPAQRGAQLSLRVRAGREQGRALFEHLIAHGIIGDW
                     REPDVIRVAPAPLYNSHADCLAFATSVRDWQRSGH"
     gene            complement(2884..3336)
                     /locus_tag="VFM52_07630"
     CDS             complement(2884..3336)
                     /locus_tag="VFM52_07630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008434497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome C"
                     /protein_id="HET8765076.1"
                     /translation="MSNPHVRVYLDDASAPVIDHELPTQLELDTSKLADGPHRLIVRA
                     EDRNGIEGVEEIPFHVQNGPGIMVTGLRPGSTQSGTVHLKVDAFSATDPFDPRRAEAR
                     SAIPTWVWVLFLFVVAWIIFYVATEWAIPASMQATPTFGTPAASAPAK"
     gene            complement(3348..3512)
                     /locus_tag="VFM52_07635"
     CDS             complement(3348..3512)
                     /locus_tag="VFM52_07635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8765077.1"
                     /translation="MQNMLMGPTWGIVAVAVVVGVITTGCFVAMFKYLVHPGEQRPDH
                     PKYSILRRDR"
     gene            complement(3523..>4059)
                     /locus_tag="VFM52_07640"
     CDS             complement(3523..>4059)
                     /locus_tag="VFM52_07640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007081407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HET8765078.1"
                     /translation="LSDTDIANIANYERSSWGNHAKPVTAADVTAIRAGKAPGAAAPA
                     ASAAAPAAAATSAGAPSAGGGYAYDAAKGKQLFEANCSACHQSTGEGVPSAFPPLKGN
                     AAVDAADPTLHLHTILHGASGVVVGGVKYTSVMPPFAGQLNDTDIADIANYERSSWGN
                     QAKPVTAAEVAALRASGK"
BASE COUNT          643 a         1459 c         1342 g          615 t
ORIGIN      
        1 atggcacgcg aactggcccg cttcggcatc cgcgtggcga ccatcgctcc gggcatcttc
       61 tggaccccga tggtcgatgg catgccgccg caggtacagg aatcgctcgg cgcctcgatc
      121 ccgttcccct cgcgcctcgg caagcccgag gaattcgccg ccaccgtcgc cttcatcctg
      181 accaaccgct acgtcaacgg cgaggtgatc cggctggacg gcgcggtgcg gctggcggcc
      241 aagtaggccg gcaaaccgat cccttcatcc tcgcccttcc aaacccagaa cccgcattcc
      301 gagcatttat gaaagcttcc gacgtcaaga aaggcaatgt cgtcgaacac gacggcaccg
      361 tgtaccaggt gcgcgacatc gagcgcagcg cgccgaccgc acgcggcggc aacgtcacct
      421 tccgcttcac gctgtattcg atccccggcg ggcgcaagta cgacctgagc ctgcgcgcgg
      481 acgacgacct gaaggagatg gagctggtgc gccgcgccgc gaatttctcc tacaaggacg
      541 gcgatgcttt cgtgttcatg gatgcggagg actacaccca gtacatcctc ggtccggagc
      601 tgatcggcga cagcgccggc tatatcgtgg aggagctgga aggctattac gtgcagttga
      661 tcgacgacgc gccagtgagc ctgcaggtgc ccaccagcgt gctgctcacg gtggccgaca
      721 ccgcgcccga gctgaagggc gcgagcgcca ccaagcgcac caagccagcc acgctcgata
      781 ccggcatcga aatccaggtg cccgactaca tcggcaccgg cgagaaggtg tgggtgaaca
      841 cgctcaccgg cgagtttgcc gggcgcgcct aggccgccac gacaggtgtg acgcggcccc
      901 gtttcgcggc cgtgcacgcg gattatcctt gcgcgaccgc cgcggcgacg cggcgcacgc
      961 ccatccctca acgaggtctt cgcatgccca gcctgcgcat ccccttcctt gccgccgcac
     1021 tcgctgccgg cctgttcgcg gcggccaccg cgtccgccgc cgacgtcagc atggccggcg
     1081 gcagcgtgcg tttttccact ccggacggct ggacggagat cctcgaaacc gacggcgacc
     1141 cggaaatccg tgccttccag gtacccgacc cgtcgcccac cggccacacc gtgctcgcgc
     1201 gcgtcaccgt gaccgtgcac gcgatgccgg acccgcaggc gttcgcggcg tgggtaggcg
     1261 aagccacggc caaggccgcc gcgctgcccg gataccagcc ggccaaggcc gccacgcccg
     1321 acagcgccag ctacaccgcg cacgaatccg gcgtcacggt gagctatcgc gagatgtact
     1381 ggtaccacgc cggccacgcg atccagctgc gttgcctgcg tccccagcag tcgcaggccg
     1441 gcgcggcatg gggcgccgcc ttcgaccgcg gctgcgcggc cattgcggca cggctgaaat
     1501 aagccgtgtc gaccccttat gcagccaccg ccacctgggc agcagcagcc gacgccgccg
     1561 acccgttgcg cgcgtttcgc gacgaattcc tgatcccgcc gcacgccggt ggcgacagcg
     1621 tctacctgtg cggcaattcg ctgggcttgc agccgcgcgg cgtgcggcgc gtacttgacg
     1681 cggagctggc gagctgggcc gagcgtgccg tcgagggcca cttcaagggc ccttcgccat
     1741 ggctcggcta ccaggcgacg gtgcgcgacg gcatcgcgga agtcgtcggt gcgcagccgt
     1801 ccgaagtggt ggcgatgaat acgctcggcg tgaacctgca cctgctgatg gcgagctttt
     1861 atcggccaac gcgcgaacgc ccggcgatcc tgctggaggc cggcgcgttt cccaccgacc
     1921 gctacgcgct ggaatcgcag gtgcggttcc acggcttcga tcccgccgac gcactgatcg
     1981 aactggcgcc ggatgcgcca cacggcaccc tgtccctggc cgcgatcgaa cgcgcactcg
     2041 acgaacacgg cgcccgcatc gcgctggtgc tgctgcccgg cgtgcagtac cgcaccggcc
     2101 aggcgttcga cctcaaggcg atcaccgcgc tcgcccatcg ccacggctgc atggccggct
     2161 tcgacctcgc ccacgcggtc ggcaacctgc cgctgcaatt gcacgacgcc gatgccgact
     2221 tcgccgtgtg gtgccactac aaatatctca acgccggccc cggcgcggtg ggcggcgcct
     2281 tcgtgcacgc gcgccatgcc cgcggggatc tgccgcggct tgccggctgg tggggcaatg
     2341 acgaggccac gcggttcctg atgcggccga cgttccagcc gacgccgggc gccgagggct
     2401 ggcaggtttc caacccgccg atcctcgcgc tcgcaccgct gcgcgcctcg ctcgaactgt
     2461 tccagcgcgc cggcatgccg gcgctggctg aaaagtcacg ccagctgacc ggctacctcg
     2521 aatggctggt cgacacccag cttgccgacg tgctcgaagt cgtcaccccg cgagcccccg
     2581 cgcagcgcgg cgcgcagctg tcgcttcgcg tgcgcgccgg gcgggagcag gggcgcgccc
     2641 tgttcgagca cctgatcgcg cacggcatca tcggcgactg gcgcgaaccc gacgtgatcc
     2701 gcgtcgcacc ggcgccgctg tacaacagcc acgccgattg cctggcattc gccacatcgg
     2761 tgcgcgactg gcaacgcagc ggtcactgag ccgcggcatc ggcgcagcga tgggctgcgc
     2821 cgcacgcgcg caacccgcgc cgatctgccg gaaggaacgc tgcaagaggg ctgatgcgct
     2881 gccctacttc gccggcgcgc tggccgcggg cgtgccgaag gttggcgtcg cctgcatgct
     2941 ggccgggatg gcccactcgg tcgccacgta gaaaatgatc cacgcgacca cgaacagaaa
     3001 cagcacccag acccaggtcg ggatcgccga acgcgcctcg gcacggcgcg gatcgaaagg
     3061 atcggtggcg ctgaacgcgt cgaccttcag gtgcacggtg ccgctctggg tcgagcccgg
     3121 ccgcagcccg gtcaccatga tgccggggcc gttctgcacg tggaacggaa tctcctcgac
     3181 gccttcgatg ccgttgcggt cctcggcgcg cacgatcaac cggtgcgggc cgtcggcgag
     3241 cttgctggta tccagctcga gttgcgtggg caactcgtgg tcgatgaccg gggcggaggc
     3301 gtcgtccagg taaacgcgta cgtgtggatt ggacatggcg atttccctca acggtcgcgg
     3361 cgcaggatgg aatacttcgg atgatccggg cgctgctcgc ccggatgcac gaggtacttg
     3421 aacatcgcga cgaagcagcc ggtcgtgatc acgccgacga ccaccgccac cgcgacgatg
     3481 ccccaggtcg gacccatcaa catgttctgc atggcagcct cctcacttgc cgctggcgcg
     3541 caacgcagcc acttcggccg cggtcactgg cttggcctga ttgccccacg acgaacgctc
     3601 gtaattggcg atgtccgcaa tgtccgtgtc gttcaactgg ccggcgaacg gcggcatcac
     3661 gctggtgtac ttcacaccgc cgacgacgac accgctggcg ccgtgcagga tggtgtgcag
     3721 gtgcagcgtc gggtcggcgg catccacggc cgcgttgccc ttgagcggcg ggaacgcact
     3781 cggcacgcct tcgccggtcg actggtggca ggccgagcaa ttggcctcga acaactgctt
     3841 gcccttggcg gcgtcatacg cataaccacc accagcggac ggcgcaccag ccgacgtggc
     3901 cgcggcggct ggcgcagccg cggatgccgc cggcgcggcg gcacctggcg ccttgccggc
     3961 gcggatcgcg gtgacgtccg ccgccgtcac cggcttggcg tggttgcccc acgaggagcg
     4021 ctcgtagttg gcgatgttgg cgatgtcggt atcgctgag
//
LOCUS       DASSVL010000434         3789 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1252717,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000434 DASSVL010000000
VERSION     DASSVL010000434.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3789)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3789)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3789
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1252717"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..329)
                     /locus_tag="VFM52_07645"
     CDS             complement(<1..329)
                     /locus_tag="VFM52_07645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015446358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DJ-1/PfpI family protein"
                     /protein_id="HET8765079.1"
                     /translation="MRDTVYFLVFDGYADWQAALALCEIRRPGDWRVQAVGFSLAPVV
                     SMGGLVVQPELSLAQLDLGRAALLILPGGHLWTRGNGAAAVAAARRVHAAGAPVAGID
                     GGVLALAR"
     gene            456..1487
                     /locus_tag="VFM52_07650"
     CDS             456..1487
                     /locus_tag="VFM52_07650"
                     /EC_number="3.1.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014506031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042132 - fructose 1,6-bisphosphate
                     1-phosphatase activity [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class 1 fructose-bisphosphatase"
                     /protein_id="HET8765080.1"
                     /translation="MKPVSLIQFLIEERRAGHINAELSLLIEVVARACKRIGVAVNKG
                     ALGGVLGNAGTDNVQGEAQKKLDVISNEILLEANAWGGHLAACASEDMEDPQPIPDMY
                     PKGHHLLLFDPLDGSSNIDVNVSVGTIFSVLRCPDEVDEPKAEHFLQPGTAQLAAGYV
                     VYGPATVLMLTFGHGTHEFTLDREVGSFVLSRRNVRIPPATAEFAINMSNQRHWEAPM
                     QRYVGELLAGKDGPRGRDFNMRWVASMVADVHRILTRGGVFYYPLDAKIRANGGTGKL
                     RLMYEANPMAFIVEQAGGMATTGRGRILDVQPTALHQRVPVFLGSQEEIALVTHYHRE
                     ADGAQDGGR"
     gene            1535..2470
                     /locus_tag="VFM52_07655"
     CDS             1535..2470
                     /locus_tag="VFM52_07655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008438542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HET8765081.1"
                     /translation="MNLRRLFALLLAAVLVGACSHAAKPELLPATPPPAPPLAPAPVK
                     LRIGLALGGGAAKGFAHIGVIKMLEASGIHPDVVAGTSAGSVVGALYASGMNPFQMQQ
                     VAFGLDEAKIRDVQLFGGGLVRGRALENYVNQLVHDQPIQKLKLPFAAVATQLESGRR
                     AVFVSGNTGQAVRASCSIPGVFEPVDIGGKHYVDGGVLSPVPVDAARQLGADFVIAVD
                     ISATPGGKNPQGMFGILNQSITIMGRELARQELARADVVIRPDLTGIGPTDFDQKNRA
                     ILAGEKAALAAIPGIRARLAARTAQVTAQRAAATP"
     gene            2583..>3789
                     /locus_tag="VFM52_07660"
     CDS             2583..>3789
                     /locus_tag="VFM52_07660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008212394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S9 family peptidase"
                     /protein_id="HET8765082.1"
                     /translation="MSFRLHASLAALFGLLAVSPVAPAQTAPAANPTLALLGKLDHLQ
                     RIGTVALSPDGRQLAWVREGKQPAIELGDADGRHVRALDVGAARADCGKRDLAWSPDS
                     RTLALLVDCGKDLTNTKAVRLAVVLLDVRGKAAPRELAALAGYAHGLAWAHDGKALDL
                     LFVPGATRQAAATAAGAEQVGVIGQAAPQVQRVASIDLADGKLRELTPATLYAYEFHR
                     APDGARIAYTAAEPPGDDNWWVAKLYVQPAQPGATPTVLVDPATVTGPLHGLQMALPR
                     FSPDGTRIAFIGGLMSDQGSTGGDLYAVPAKGGAPVDFTPAITVTPQWYTWTGNDTLL
                     VNQNARGKVELATYTLHGDRADATTTWFDLPASVGAGGAVLSLSVSADGKRVAWQQSA
                     FDAAPEVHAG"
BASE COUNT          553 a         1384 c         1328 g          524 t
ORIGIN      
        1 cgggccagcg ccagcacgcc gccgtcgatg cccgccaccg gcgcgccggc tgcgtgcacg
       61 cggcgcgcgg ccgccactgc cgccgcgcca ttgccgcgcg tccacaggtg gccgccgggc
      121 aggatcagca gcgccgcgcg gcccaggtcg agctgggcca ggctcagctc gggctgcacc
      181 acgagcccgc ccatcgacac cacgggcgcc agcgagaaac ccaccgcctg cacccgccag
      241 tcgccgggcc ggcggatctc gcacagcgcc agtgcggcct gccaatcggc gtagccgtcg
      301 aaaacgagga aataaaccgt gtcgcgcatg ccgtttcctc ccttgtcgga agtacagctt
      361 gcccaccccc tgctgccatc gtgctgtcag caatcgggct ggaacggttc agccggagcc
      421 gggacaatgg cggcactttt cgccacggac ccgccatgaa gcccgtctcg ctgatccagt
      481 tcctgatcga ggaacgccgc gccggccaca tcaatgccga gctttcgctc ctgatcgagg
      541 tcgtcgcgcg cgcctgcaag cgcatcggcg tggcggtgaa caagggcgcg ctcggcggcg
      601 tgctcggcaa tgccggcacc gacaacgtgc agggcgaggc gcagaagaaa ctcgacgtga
      661 tctccaacga gatcctgctc gaagccaacg cctggggcgg gcatctcgcg gcctgcgcgt
      721 cggaggacat ggaagacccg cagccgatcc cggacatgta ccccaagggc caccacctgc
      781 tgctgttcga cccgctcgac ggcagctcca acatcgacgt caacgtgtcc gtcggcacca
      841 tcttctcggt gctgcgctgc ccggacgagg tggacgagcc gaaggccgag cacttcctgc
      901 agcccggcac ggcgcagctg gcggccggct acgtggtgta cggtccggcc acggtgctga
      961 tgctgacctt cggccacggc acgcacgagt tcacgctgga tcgcgaggtg ggcagcttcg
     1021 tgctcagccg gcgcaacgtg cggatcccac cggccacggc ggagttcgcg atcaacatgt
     1081 ccaaccagcg ccactgggaa gcgccgatgc agcgctacgt cggcgagctc ctggccggca
     1141 aggacggccc gcgcggcagg gacttcaaca tgcgctgggt ggcgtcgatg gtggccgacg
     1201 tgcatcgcat cctgacccgc ggcggcgtgt tctattaccc gctggacgcg aagatccgcg
     1261 ccaacggcgg caccggcaag ctgcgcctga tgtacgaggc caacccgatg gcgttcatcg
     1321 tcgagcaggc cggcggcatg gccaccaccg ggcgcgggcg catcctcgac gtgcagccca
     1381 cggcgctgca ccagcgcgtg ccggtgttcc tcggttcgca ggaggagatc gcgctggtca
     1441 cgcactacca ccgcgaggcc gatggcgcgc aggatggcgg gcgctgagtt tccgctctgc
     1501 cggtttgcgt tccccccttg tgccgccatc gcccatgaac cttcgccgcc tgttcgcgct
     1561 gttgcttgcc gccgtgctgg tcggcgcgtg ttcgcatgcc gcgaaacccg agctgctgcc
     1621 ggcgacgccg cccccggcgc cgccactcgc gcccgcgccg gtcaagctca ggatcggcct
     1681 ggcgctcggc ggtggtgcgg cgaagggctt cgcgcacatc ggcgtgatca agatgctcga
     1741 agccagcggc atccatccgg acgtggtggc cggcaccagc gccggcagcg tcgtcggcgc
     1801 gctgtacgcg agcggcatga acccgttcca gatgcagcag gtggcgttcg gcctggacga
     1861 ggcgaagatc cgcgacgtgc agctgttcgg cggcggcctg gtgcgcggcc gcgcgctgga
     1921 gaactacgtc aaccagctgg tgcacgacca gccgatccag aagctcaagc tgccgttcgc
     1981 cgcggtggcg acgcagctgg agagcggccg gcgcgcggtg ttcgtcagcg gcaacaccgg
     2041 gcaggcggtg cgcgcctcgt gcagcatccc cggcgtgttc gagccggtgg acatcggcgg
     2101 caagcactac gtcgacggcg gcgtgctgag cccggtgccg gtcgatgccg cgcgccagct
     2161 cggcgccgat ttcgtcatcg ccgtggatat ttccgccacg ccgggcggca agaacccgca
     2221 aggcatgttc ggcatcctca accagtcgat caccatcatg gggcgcgaac tcgcccggca
     2281 ggagctggcg cgcgccgatg tggtgatccg ccccgatttg accggcatcg gcccgaccga
     2341 tttcgaccag aagaaccgcg cgatcctcgc cggcgaaaag gccgcgctgg cggcgatccc
     2401 cgggatccgc gccaggctcg cggcacgcac cgcgcaagtg accgcgcagc gggcggcggc
     2461 cacgccctga tccggccggt ccggttcgtg gcgctcgccc gccgcgccat gccgatcgac
     2521 acttgggccg cggccgcgca gcggtgtagc gtgcgggctc cccccacgcc gcggagtcca
     2581 ccatgtcgtt ccgtctgcac gcctcgctcg ccgccctgtt cggcctgctg gcggtatcgc
     2641 ccgtggcgcc cgcgcagacc gcgcccgcag ccaaccccac gctggccctg ctcggcaaac
     2701 tcgaccacct gcagcgcatc ggcacggtgg cgctgtcgcc ggatggccgg cagctcgcct
     2761 gggtgcgcga gggcaagcag ccggcgatcg agctgggcga tgccgacggc aggcacgtgc
     2821 gggcgctcga cgtcggcgcc gcgcgcgcgg actgcggcaa gcgcgacctg gcgtggtcgc
     2881 cggactcgcg cacgctcgcg ttgctggtcg actgcggcaa ggacctcacc aataccaagg
     2941 ccgtgcgcct cgccgtggtg ctgctcgacg tgcgcggcaa ggccgcgccg cgcgagctgg
     3001 ctgcgctcgc cggttacgcc cacggcctgg cgtgggcgca cgatggcaag gcgctcgatc
     3061 tgctgttcgt gcccggtgcc acccgccagg cggcagccac tgccgccggg gccgagcagg
     3121 tcggggtgat cggccaggcg gcgccgcagg tgcagcgtgt cgccagcatc gatctggccg
     3181 atggcaagct gcgcgagctg acgccggcca cgctgtacgc ctacgagttc caccgcgcgc
     3241 cggatggcgc gcgcatcgcc tataccgccg ccgagccgcc gggcgacgac aactggtggg
     3301 tggcgaagct ctacgtgcag cccgcgcagc cgggcgccac gccgacggtg ctggtcgacc
     3361 ccgcgacggt cactggcccg ctgcatggcc tgcagatggc gctgccgcgc ttctcgccgg
     3421 acggcacgcg gatcgccttc atcggcggcc tgatgagcga ccagggcagc accggcggcg
     3481 atctctacgc cgtgcccgcg aagggcggcg cgccggtcga tttcactccg gccatcaccg
     3541 tcaccccgca gtggtacacg tggaccggca acgacacgct gctggtcaac cagaacgcgc
     3601 gcggcaaggt ggagctggcg acctacacgc tgcacggcga tcgcgccgac gcgacgacga
     3661 catggttcga cctgccggcc tcggtcggtg ccggtggcgc ggtgctgtcg ctgtccgtga
     3721 gcgccgatgg caagcgcgtt gcctggcagc aaagcgcgtt cgacgcggcg cccgaagtgc
     3781 acgccggcg
//
LOCUS       DASSVL010000435         4602 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_207873, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000435 DASSVL010000000
VERSION     DASSVL010000435.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 4602)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4602)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4602
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_207873"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1144
                     /locus_tag="VFM52_07665"
     CDS             <1..1144
                     /locus_tag="VFM52_07665"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008213620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="RecQ family ATP-dependent DNA helicase"
                     /protein_id="HET8765083.1"
                     /translation="SHRGEAGIIYALSRKKVDDTAAWLAAAGIDALPYHAGLDAATRA
                     TNQQRFLREDGVVMVATVAFGMGIDKPDVRFVAHLDLPRSIEGYYQETGRAGRDGLPA
                     EAWMIYGLSDVVTLSQMIAQSESADERKRVERQKLEALLAYAEATRCRREVLLAAFGE
                     AYAGPCGHCDNCITPPRTWDATVPAQKALSAVYRSGQRWGAGHVIDILRGVDNARMRE
                     LGHDRLSTFGIGEGLDERGWRSVFRQLLAAGLLASDAEGFGTLHLTAGSRAVLTGKQA
                     VCLREDAKPVRATRRRREGGGSTGANLGIEAREQPLWDALRKLRTELARAQGVPPYVV
                     FHDATLLAMLRARPTDADELAEVSGVGAAKLERYGRDFLAVINAGD"
     gene            complement(1244..1319)
                     /locus_tag="VFM52_07670"
     tRNA            complement(1244..1319)
                     /locus_tag="VFM52_07670"
                     /product="tRNA-Phe"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1284..1286),aa:Phe,seq:gaa)
     gene            complement(1400..1690)
                     /locus_tag="VFM52_07675"
     CDS             complement(1400..1690)
                     /locus_tag="VFM52_07675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015448534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oxidative damage protection protein"
                     /protein_id="HET8765084.1"
                     /translation="MSRIVHCAKLGIDTEGFDYVPWPGELGVRLYNEISVQAWRDWLA
                     HQTTLINEYRLNPLDAKDRKYLTEQMEKFLFGGDYDVAVGFTPPIKDEAHKA"
     gene            complement(1745..2788)
                     /gene="mutY"
                     /locus_tag="VFM52_07680"
     CDS             complement(1745..2788)
                     /gene="mutY"
                     /locus_tag="VFM52_07680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007807929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004844 - uracil DNA N-glycosylase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="A/G-specific adenine glycosylase"
                     /protein_id="HET8765085.1"
                     /translation="MNPFADTLLAWFDRHGRHDLPWQHPRDAYRVWISEIMLQQTQVS
                     TVVGYFERFVTALPDLPSLAAASEDAVFALWSGLGYYRRARFLHQAARSCVERHGGEL
                     PRDFAALAALPGIGRSTAGAILAQAWGQRFPILDGNVKRVLTRYHGIRGYPGERAIEQ
                     ALWQHADAHTPAERVADYTQAIMDLGATVCTRAKPSCATCPLAAHCVAYRDGLVAELP
                     TRKPGKALPERHTLMLVLRDRSGRILLERRGPHGVWSGLWSLPEAADANAAAGVAAGL
                     AGTTDARALPAFTHVFTHYRLHVTPWLYADATPKPAVADAPGLRWCDVETVAALGLPT
                     PVRRLLLQVNDVH"
     gene            complement(2785..3858)
                     /locus_tag="VFM52_07685"
     CDS             complement(2785..3858)
                     /locus_tag="VFM52_07685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008434121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AsmA family protein"
                     /protein_id="HET8765086.1"
                     /translation="MPRGWRRLLLATGTALLAVVLVLAIALYLLLQPDRFTALLQDEA
                     QKAGLTLSLASPASPTLFPRPALELSGITLSADGAETPLLLAARGRLTLPWRTMFGGQ
                     PAITQMEVDAPRVDLDALQAWLTALPRQEDNVAPTIPRIDTGIRVEHGSLVRGDHLLL
                     NNVTLLTGSLAPGQPFPLDLSAAAAGGAPLQLRLIATPRMRGRALLLDNIEVHAAQGN
                     GTTLGLTGNAYWHGAADASAQLGGKLDRADTGSYTVVLTLTPADQTQPLLLHLKLDGP
                     GNHADLRLPPLALARWWSALNAAPDQAAPAQPSVPPANGSLQIAKLQVGNVSIEGLSV
                     QADESEPAIATSSPTTPPAGGAR"
     gene            complement(3882..>4602)
                     /gene="ftsY"
                     /locus_tag="VFM52_07690"
     CDS             complement(3882..>4602)
                     /gene="ftsY"
                     /locus_tag="VFM52_07690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013534868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005047 - signal recognition particle
                     binding [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="signal recognition particle-docking protein
                     FtsY"
                     /protein_id="HET8765087.1"
                     /translation="ADAPALLAALRQALLALLKPVEQPLQVDGRKPFVVLVVGINGVG
                     KTTTIGKLARRWHDAGMSVLLAAGDTFRAAAVEQLKTWGERNAVPVISQGQDADAASV
                     IFDALQAARSRGADVLIADTAGRLHTQGGLMDELGKIARVLKKLDPDAPHEVLMVIDG
                     TTGQNAVNQVRQFRQIVGVTGLVVTKLDGTAKGGVVFALAREFGLPIRFVGLGETAAD
                     LRPFDAVAFVDGLLPDVGDHA"
BASE COUNT          706 a         1487 c         1716 g          693 t
ORIGIN      
        1 cagccaccgc ggcgaggccg gcatcatcta tgcactcagc cgcaagaagg tcgacgacac
       61 ggcggcgtgg ctggccgcgg ccggcatcga tgcattgccg taccacgccg ggctggatgc
      121 ggcgacacgc gcaacgaacc agcagcggtt cttgcgcgag gatggcgtgg tgatggtggc
      181 cacggtcgcc ttcggcatgg gcatcgacaa gcccgacgtg cgctttgtcg cgcatctcga
      241 tctgccgcgg tccatcgagg gctattacca ggaaaccggg cgtgccgggc gcgatggcct
      301 gccggccgag gcgtggatga tctatgggct gtccgacgtg gtgacgctca gccaaatgat
      361 cgcgcagtcg gagtccgccg atgagcgtaa gcgcgtggag cgccagaagc tggaagcctt
      421 gctggcctac gcggaggcga cgcggtgtcg ccgcgaggtg ctgctggcgg cgtttggcga
      481 ggcctacgcc gggccgtgcg gccactgcga caactgcatc acgccgccac gcacctggga
      541 cgcgaccgtg cccgcgcaga aggcgctatc ggcggtgtac cgcagtggcc agcgctgggg
      601 agccgggcat gtcatcgaca tcctgcgcgg cgtcgacaac gcgcgcatgc gcgaactcgg
      661 ccatgaccgg ctgagcacgt tcggcattgg cgaggggctg gacgagcgcg gttggcgctc
      721 ggtattccgc caattgctcg cggccgggct tctcgccagt gatgcggaag gcttcggtac
      781 gttgcacctg acggccggca gccgggcggt gctgaccggc aagcaggcgg tgtgcctgcg
      841 cgaagacgcg aagccggtgc gcgcgacgcg ccgccgccgc gaaggcggtg gatcgaccgg
      901 cgcgaacctg ggcatcgagg cacgcgagca accgctgtgg gacgcgctgc gcaagctgcg
      961 caccgagctg gcgcgtgccc agggggtgcc gccctacgtg gtgttccacg acgcgacctt
     1021 gttggcgatg ctgcgcgcgc ggccgaccga tgcggatgaa cttgccgagg tcagcggcgt
     1081 cggcgcggcg aagctcgaac gctacggccg cgatttcctc gccgtgatca atgctggcga
     1141 ctgaccacgc gattcaacgc cgacgggatt tgagccggcg ccacggtgtt acggtgatgc
     1201 cgatacaaaa acggcctgca tcgatgcagg ccgttgatat gtatggtggc cgggggcgga
     1261 atcgaaccgt cgacacgggg attttcagtc ccctgctcta ccaactgagc tacccggccg
     1321 agaaggccga tcaagggcag ccgcgctggt cgccgatgaa gggtggagcc gcgcattaga
     1381 ccgaatgcgc ggcggatcgt caagccttgt gcgcctcgtc cttgatcggc ggggtaaagc
     1441 cgacggccac gtcgtagtct ccgccgaaca ggaatttctc catctgttcg gtgaggtatt
     1501 tgcggtcttt cgcgtccagc gggttcaaac ggtactcgtt gatcagcgtg gtctggtggg
     1561 ccagccagtc gcgccaggcc tgcaccgaga tctcgttgta caggcgcacg ccgagttcgc
     1621 ccggccaagg aacgtagtcg aagccctcgg tgtcgatgcc gagcttcgcg cagtggacga
     1681 tgcggctcat ggggtggcgg gcaccatgtc aggtggaagc aaacgtgcag tgtgcgcgaa
     1741 tcgctcagtg cacgtcgttg acctgcaaca gaagccggcg caccggcgtc ggcaggccaa
     1801 gcgcggcaac ggtctccacg tcgcaccagc gcaggccggg ggcgtcggcc accgcgggtt
     1861 tcggcgtcgc gtccgcatac agccacggcg tcacgtgcag ccggtagtgg gtgaatacgt
     1921 gggtgaaggc gggcagggca cgggcgtcgg tggtgccggc caagccggcg gcaacacccg
     1981 ctgccgcgtt ggcgtcagcg gcttcgggca ggctccacag cccggaccag acgccatgcg
     2041 ggccgcgccg ttcgagcagt atccgtccgc tgcggtcgcg cagcacaagc atcagcgtgt
     2101 ggcgttccgg cagggccttg cccggcttgc gcgtgggcag ctcggcgacg aggccgtcgc
     2161 ggtaggcgac gcagtgggcg gcaagcgggc acgtggcgca gctcggcttg gcgcgggtac
     2221 agaccgtcgc accgagatcc atgattgcct gggtgtaatc ggcgacgcgc tcggcagggg
     2281 tatgggcgtc ggcgtgttgc cacaacgcct gctcgatggc gcgctcgccg ggatagccgc
     2341 ggatgccgtg gtagcgggtg agaacgcgct tgacgttgcc gtcgaggatg ggaaagcgct
     2401 ggccccaggc ctgggccagg atcgcgccgg cagtggagcg accgatgccg ggcaacgccg
     2461 ccagcgcggc gaaatcacgc ggcagctcgc cgccgtggcg ctcgacgcac gaccgcgcgg
     2521 cctgatgcag gaaacgcgcg cggcggtagt agccgaggcc ggaccacagg gcgaacaccg
     2581 catcctcgga tgccgcggca agcgacggca ggtcgggcag cgcggtgacg aagcgctcga
     2641 agtagccgac cacggtggaa acctgcgtct gctgcagcat gatctcggaa atccacacgc
     2701 ggtaggcgtc gcgcggatgt tgccagggca ggtcgtggcg gccgtggcgg tcaaaccacg
     2761 ccagcaaggt gtcggcgaaa ggattcaccg cgcgccgccg gccggcggcg ttgtgggcga
     2821 tgacgtggcg atcgcgggct cgctctcatc ggcctgcacg ctgagcccct cgatgctgac
     2881 gttgccgacc tgcagtttcg cgatctgcag cgaaccgttt gccggcggca cgctgggctg
     2941 cgccggggca gcctggtccg gcgcggcatt cagtgcgctc caccagcgtg ccagcgcaag
     3001 cggcggcagg cgcaggtcgg catggttgcc cgggccgtcg agcttcaggt gcaacagcaa
     3061 cggttgggtt tgatcggcgg gagtgagcgt cagcaccacg gtgtagctgc cggtgtcggc
     3121 ccggtcgagc ttgccgccca gttgcgcgga ggcatcggcg gcgccgtgcc aatacgcgtt
     3181 gccggtcaac ccgagcgtgg tgccgttgcc ctgcgcagcg tgtacttcga tgttgtcgag
     3241 cagcagcgcg cggccgcgca tgcgcggcgt ggcgatcagg cgcagttgca gcggagcgcc
     3301 gcccgcggcc gcggcggaaa ggtcgagcgg aaacggctgt ccgggtgcca ggctgccggt
     3361 cagcagggtc acgttgttga gcagcagatg gtcgccgcgc accaggctgc catgttcgac
     3421 gcggatgccg gtgtcgatgc gcggaatggt cggcgccacg ttgtcctctt gccgcggcag
     3481 cgccgtgagc cacgcctgca gcgcatcgag gtcgacgcgc ggcgcgtcca cttccatctg
     3541 ggtgatggct ggctggccgc cgaacatggt gcgccacggc agcgtgagcc ggccgcgcgc
     3601 ggccagcagc agtggggttt ccgcaccgtc cgcgctgagc gtgatgccgc tgagctccag
     3661 cgccgggcgt ggaaacagcg tcggactggc cgggctggcc aagctcagcg tgaggccggc
     3721 tttctgcgcc tcgtcctgca gcagtgcggt gaagcggtcc ggttgcaaca gcaggtacag
     3781 cgcgatcgcc agtacgagca ccaccgccag cagcgcagtg ccggtagcga gcagcaggcg
     3841 gcgccatcca cgtggcatgt cagctccgcg aggcctcgtg ctcaagcatg atcgccgaca
     3901 tcgggcagca ggccgtcgac gaaggccacc gcgtcgaagg ggcgcaggtc ggcggcggtt
     3961 tcgccaaggc cgacgaagcg gatcggcagc ccgaactcgc gggcgagggc gaacaccacg
     4021 ccgcccttgg cggtgccgtc gagcttggtg acgaccagac cggtgacgcc gacgatctgg
     4081 cggaattggc gcacctggtt cactgcgttc tggccggtgg tgccgtcgat caccatcagc
     4141 acctcgtgtg gcgcgtccgg gtcgagcttc ttaagtacgc gggcgatctt gcccagctcg
     4201 tccatcagcc cgccctgcgt gtgcaggcgg ccggcggtgt cggcgatcag cacgtcggca
     4261 ccgcgcgagc gcgcggcctg cagcgcgtcg aagatcacgc ttgcggcatc ggcgtcctgg
     4321 ccctgggaga tcaccggcac cgcgttgcgc tcgccccagg tcttgagctg ctcgacggcg
     4381 gcggcgcgga aggtgtcgcc ggcggccagc agcacgctca tgccggcgtc gtgccagcgc
     4441 cgcgccagct tgccgatggt ggtggtcttg ccgacgccgt tgatgccgac caccagcacc
     4501 acgaacggct tgcggccgtc cacctgcagt ggctgctcga ccggcttgag cagggccagc
     4561 agcgcctggc gcagcgcggc cagcagcgcc ggcgcgtcgg cg
//
LOCUS       DASSVL010000436         2279 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_603320, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000436 DASSVL010000000
VERSION     DASSVL010000436.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2279)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2279)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2279
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_603320"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1022
                     /gene="nagA"
                     /locus_tag="VFM52_07695"
     CDS             <1..1022
                     /gene="nagA"
                     /locus_tag="VFM52_07695"
                     /EC_number="3.5.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008437720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008448 - N-acetylglucosamine-6-phosphate
                     deacetylase activity [Evidence IEA];
                     GO_process: GO:0006040 - amino sugar metabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="N-acetylglucosamine-6-phosphate deacetylase"
                     /protein_id="HET8765088.1"
                     /translation="RAAQADDLGGALLVPGFIDTQVNGGGGALFNAAPTVDTIRTIGA
                     AHRRFGTTGFLPTLISDRPEIMRDALAAIDAAFDAGVPGLLGVHLEGPFLAPERKGVH
                     DAKWFHVPSEDELALLTAPHRGVRVLTLAPERVPHEMIARLAAAGVIVNAGHTAADYA
                     TVRAALAAGVHGFTHLFNAMTPFGSRAPGVVGAALDDAGSWCGIIADGHHVHPASLRN
                     AIAAKARGKIVLVTDAMPPVGAADPSYVLNGETITAKDGICQTAAGVLAGSALDMATA
                     VRNTVNLLEQPLAEAVRMASEYAADYLGLAATHGRIAVGCQADLVAMDADCRVRHTWI
                     GGRKA"
     regulatory      1126..1346
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00174"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="cobalamin riboswitch; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="adenosylcobalamin"
                     /db_xref="RFAM:RF00174"
     gene            1472..>2279
                     /locus_tag="VFM52_07700"
     CDS             1472..>2279
                     /locus_tag="VFM52_07700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007080571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor plug domain-containing
                     protein"
                     /protein_id="HET8765089.1"
                     /translation="MNRTLLAAALTCCFVSAHAADQRDTSALDPVVVTATRTPVTVDD
                     ALSAVDVITRADIERLQPLSVQDLLTGLPGVSIVRNGGLGQLGTLSLRGTNATHTLVL
                     IDGVRIASVTAGFAALEQIPVDQIERIEIVRGPRSSLYGPDAIGGVIQVFTRHGHADG
                     GLVPAFSATVGNRGLAGATAGLSGGDANGWYNVSLGGQYTSGYPVCRMGAAEAFAGCF
                     ADDPRDDAFRNWNGMASGGYRWDNGVTLSANGLRSRNFVEYAGIPFGSNRA"
BASE COUNT          323 a          844 c          787 g          325 t
ORIGIN      
        1 tgcgcgccgc gcaggccgac gacctcggcg gcgcgctgct ggtgcccggc ttcatcgaca
       61 cgcaggtgaa cggcggcggc ggcgcgttgt tcaacgccgc gcccacggtc gacaccatcc
      121 gcaccatcgg cgcggcgcac cgccggttcg gcaccaccgg cttcctgccg acgctgatca
      181 gcgaccggcc cgagatcatg cgcgacgcgc tggcggcgat cgacgccgcg ttcgatgccg
      241 gcgtgcccgg cctcctgggc gtgcatctcg aaggcccgtt cctcgcgccc gagcgcaagg
      301 gcgtgcacga cgccaagtgg ttccacgtgc cgagcgagga cgagctcgcg ctgctcaccg
      361 cgccgcatcg cggcgtgcgc gtgctcaccc tggcgcccga gcgcgtgccg catgaaatga
      421 tcgcgcggct cgccgccgcc ggcgtcatcg tcaatgccgg gcataccgcg gccgactacg
      481 ccaccgtgcg cgccgcgctc gccgccggcg tgcatggctt cacccacctg ttcaacgcga
      541 tgaccccgtt cggcagccgc gcgcccggcg tggtcggcgc cgcgctggac gacgccggca
      601 gttggtgcgg catcatcgcc gacggccacc acgtgcaccc ggccagcctg cgcaacgcca
      661 tcgcggcaaa ggcgcgcggc aagatcgtgc tggtcaccga cgccatgccg ccggtcggtg
      721 ccgccgaccc cagctacgtg ctcaacggcg aaaccatcac cgcgaaggac ggcatctgcc
      781 agaccgccgc cggcgtgctc gccggttccg cgctggacat ggccaccgcc gtgcgcaaca
      841 cggtcaacct gctcgaacaa ccgctggccg aagccgtgcg catggccagc gaatacgccg
      901 ccgactacct cggcctcgcc gccacccacg gccgcatcgc cgtcggctgc caggccgacc
      961 tggttgccat ggatgccgac tgccgcgtcc ggcacacctg gatcggcggg cgcaaggcgt
     1021 agcagtgacg tcacggtcgg cgcgacgcgg ccccttgcat gcgaccgtcg ggacgaatcc
     1081 tgagccacga aatgccggtg tggtggggcg caccgtacaa gctgctagac tgcgcgccgt
     1141 tcaggtgtcc tgacggcatt cgcccaaggg atgaaacggg aagccggtgc gtggcgcgag
     1201 ccaccagccc ggcgctgccc ccgcaacggt aagcgagtcg aggcgcggtc attcgccact
     1261 gtgcattgca cgggaaggca ccgcgccgga cgatccagca tcgtcacccg cgagcccgga
     1321 gaccggcctg gacggaactg ttggcacgcg gtgggcgtgg ccgggcagat gcgtccggcg
     1381 tcttcgcctt cgcctctttc cgttcccttc cgctcgcgct gccggcgtgg tgatgaccat
     1441 gcgccgcttc cctgtgcggc ggaggaatgt gatgaaccgg accttgcttg ccgcggcgct
     1501 gacgtgctgc ttcgtttccg cccatgcggc cgaccagcgc gacacgagcg cgctcgatcc
     1561 cgtcgtcgtt accgcgacgc gcacgccggt cacggtggat gacgcactgt ccgcggtcga
     1621 cgtgatcacc cgcgcggaca tcgagcgcct gcagccgttg tccgtgcagg atctgctgac
     1681 cggcctgccc ggcgtcagca tcgtgcgcaa cggcgggctc ggccagctcg gcacgctgtc
     1741 gctgcgtggc acgaatgcca cccacacgct ggtgctgatc gacggcgtgc gcatcgcgtc
     1801 ggtcaccgcg gggtttgccg cgctggagca gattccggtc gaccagatcg agcgcatcga
     1861 gatcgtgcgc gggccgcgtt cgagcctgta tggcccggac gcgatcggcg gcgtgatcca
     1921 ggtcttcacc cgccacggcc acgccgacgg cggcctggtg ccggcgttca gcgcgacggt
     1981 cggcaatcgc gggctggccg gtgcgactgc cgggctgtcc ggcggcgatg cgaacggctg
     2041 gtacaacgtg tcgctcggcg gccagtacac cagcggctac ccggtgtgcc gcatgggcgc
     2101 ggccgaggcg ttcgccggct gtttcgccga cgacccgcgc gacgacgcgt tccgcaactg
     2161 gaacggcatg gccagcggcg gctaccgctg ggacaacggc gtaacgctca gcgcgaacgg
     2221 cctgcgcagc cgcaacttcg tcgaatacgc cggcatcccg ttcggcagca accgggcgt
//
LOCUS       DASSVL010000437         2222 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_815133, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000437 DASSVL010000000
VERSION     DASSVL010000437.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2222)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2222)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2222
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_815133"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            203..691
                     /gene="tadA"
                     /locus_tag="VFM52_07705"
     CDS             203..691
                     /gene="tadA"
                     /locus_tag="VFM52_07705"
                     /EC_number="3.5.4.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007508366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008251 - tRNA-specific adenosine
                     deaminase activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0002100 - tRNA wobble adenosine to inosine
                     editing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA adenosine(34) deaminase TadA"
                     /protein_id="HET8765090.1"
                     /translation="MAETNDITTASFTAADEGYMRRALQLAEHARDAEGEVPVGAVLV
                     LDGEIVGLGWNRNITLHDPTAHAEIMALRAAGEKLANHRVVGGTLYVTLEPCAMCAMA
                     LVHARIARVVYAAADPKTGAAGSVFDTLIDPRHNHRVNVQGGLLAEESSALLRAFFRA
                     RR"
     gene            complement(695..>2222)
                     /locus_tag="VFM52_07710"
     CDS             complement(695..>2222)
                     /locus_tag="VFM52_07710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008214234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HET8765091.1"
                     /translation="CMAGRWRTVPIPALLLAASLVLVPRIGAEFMPHLDEGSLWVRAT
                     MPYTISYQKSAEITPKIRAILRSFPVVTTVTSELGRPDDGTDSTGFFNVEFFVGLKPY
                     AQWGGQYKDKQALIDAINRKLAVFPGISFNYTQPAEDAVDEAETGLKSSLAVKVYGPD
                     LKTLQDKGKAIKQAMQQVPGITDVTLVHELGQPNLAIDIDRAAIARYGLNVADVNAVI
                     EAAVGGDVATQVVQGEKQFDLVVRLARRYRDNPQAIGDIPVLAPGGQEIPLKALASIE
                     VSNGASFIYREDNSRYIGVQFSVSGRDLASAVRAGMREVAHDVKLPQGYRIDWGGEYK
                     EYTASRAQLDMILPVTVLVIFGLLFVLYGNFKFPFITVLSVLLSAPVGAVLALWLTDT
                     PFSVSSGIGFIVLFGVSVLTSVVYISCANELRGRGMTIDAATREAAILRLRPIMMTAL
                     VAALGLLPAAIATGVGTDSQRPFALVIVSGMLSRLVIGVLLMPVLYRLVARDSDALRV
                     "
BASE COUNT          357 a          765 c          770 g          330 t
ORIGIN      
        1 ccggctgggc aacggcgatc ctcgccggct acgggctgat cgtggcgttg atggcggccg
       61 gcaccctgct cggggtgctt gactggcggc acgcccgcgc ggcgcaggca tgacgacacg
      121 cggatgcctg cggtgcaacg acgccagcgt ggataatggc gccccgcgct gcgcgcccgc
      181 acgtatccgg cactgaccgg ccatggctga gacgaacgac atcacgaccg cgagcttcac
      241 tgccgctgat gagggctaca tgcgccgcgc gctgcagctc gccgaacatg cgcgcgacgc
      301 ggagggcgaa gtgccggtag gcgcggtgct ggtgctggat ggagagatcg tcgggctggg
      361 ctggaaccgc aacatcacgc tgcacgatcc caccgcgcac gccgagatca tggcgttgcg
      421 cgcggccggc gagaagctgg cgaaccatcg cgtcgtcggc ggcacgctgt acgtgacgct
      481 ggagccctgc gcgatgtgcg cgatggcgct ggtccacgca cgtatcgcgc gcgtcgtcta
      541 cgcggcggcc gaccccaaga ccggcgccgc cggcagcgtg ttcgacacgc tgatcgatcc
      601 gcgccacaac catcgcgtca acgtgcaggg cggcctgctt gccgaggagt cttcggcgct
      661 gctgcgcgcg tttttccgcg cgcgacgctg agcgtcacac ccgcagcgcg tcgctgtcgc
      721 gcgccaccag gcgatacagc accggcatca gcagcacgcc gatcaccagc cgcgacagca
      781 tgccgctgac gatgaccagc gcgaacggcc gctgcgaatc ggtgccgacg ccggtggcga
      841 tcgccgccgg caacaggccc agcgccgcga ccagcgccgt catcatgatc gggcgcaggc
      901 gcaggatggc ggcctcgcgc gtggccgcgt cgatcgtcat tcctcgcccg cgcagctcgt
      961 ttgcgcacga gatgtagacc accgaggtca gcaccgacac gccaaacagc acgatgaagc
     1021 cgatgccgga ggacaccgag aacggcgtgt cggtgagcca cagcgcgagc acggcgccga
     1081 ccggcgcgct gagcagcacg ctcagcacgg tgatgaacgg aaacttgaag ttgccgtaga
     1141 gcacgaacag cagcccgaag atcaccagca cggtcaccgg caggatcatg tcgagctgcg
     1201 cgcgcgacgc ggtgtactcc ttgtattcgc cgccccagtc gatgcggtag ccctgcggca
     1261 gcttcacgtc gtgcgccacc tcgcgcatgc cggcgcgcac cgcgctggcc aggtcgcggc
     1321 cgctcaccga gaactgcacg ccgatgtagc gcgaattgtc ctcgcggtag atgaaggagg
     1381 cgccgttgct gacctcgatc gacgccagcg ccttgagcgg tatttcctgc ccgcccgggg
     1441 ccagcaccgg aatgtcgccg atcgcctgcg ggttgtcgcg gtagcggcgc gccaggcgca
     1501 ccaccaggtc gaactgcttc tcgccctgca cgacctgggt ggcgacgtcg ccgccgaccg
     1561 ccgcctcgat caccgcgttg acgtcggcca cgttgagccc gtagcgcgcg atcgcggcgc
     1621 ggtcgatgtc gatggcgagg ttgggctggc ccagctcgtg caccagggtg acgtcggtga
     1681 tgccgggcac ctgctgcatc gcctgcttga tcgccttgcc cttgtcctgc agcgtcttca
     1741 ggtcggggcc gtacaccttc accgccagcg agctcttgag cccggtttcg gcctcgtcca
     1801 ccgcatcctc ggccggctgg gtgtagttga aggaaatgcc agggaatacc gcgagcttgc
     1861 ggttgatcgc gtcgatcagc gcctgcttgt ccttgtactg cccgccccac tgggcataag
     1921 gcttcaggcc cacgaagaac tcgacgttga agaagccggt ggagtcggtg ccgtcgtcgg
     1981 gccggcccag ctccgaggtc accgtggtca ccaccgggaa ggagcgcagg atggcgcgga
     2041 tcttcggcgt gatctcggcc gacttctggt aggagatggt gtatggcatg gtggcgcgca
     2101 cccacagcga gccctcgtcg aggtgcggca tgaactccgc gccgatgcgc ggcaccagca
     2161 ccagggacgc cgccagcagc agggcgggga tcggcacggt gcgccagcgg ccggccatgc
     2221 ag
//
LOCUS       DASSVL010000438         5506 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_744544, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000438 DASSVL010000000
VERSION     DASSVL010000438.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 5506)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5506)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5506
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_744544"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..686)
                     /locus_tag="VFM52_07715"
     CDS             complement(<1..686)
                     /locus_tag="VFM52_07715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015446341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0015031 - protein transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MotA/TolQ/ExbB proton channel family protein"
                     /protein_id="HET8765092.1"
                     /translation="MFLQTPAPTGNTNSEAMKQMGFANLAENFDALGWIVFIVLVLLS
                     LLSWYFIIANTIRNFVVTSRANKVIDAFWGNPSTQDAIRELEAQPKGEPFSKIALDAA
                     AAVAHHQQAVAENNGLAQSLSRSEFLDRSLRQAVARETLRMETGLTLLATVGSAAVYV
                     GLLGTVWGIYHALIRIAATGNASMSAVAGPVGEALIMTAIGLFTAIPAVFAFNAFNRS
                     NRVIFARFDE"
     gene            complement(737..1396)
                     /locus_tag="VFM52_07720"
     CDS             complement(737..1396)
                     /locus_tag="VFM52_07720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015446340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0031992 - energy transducer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HET8765093.1"
                     /translation="MASSNEDSEREGFSWKRTLALAFAIGLHAFAFLVLMAPMASGSQ
                     KHVKKDQIVQVNFIEPPPPPPPPPPPPPEPPKQPPPKIIKQVVPPPTPPPPAPPPPVA
                     EVSQNAVAAAPPAPPAPPAPPADIAAGSDLSYNSRIQPKYPPQAIRQRHEGTVTLLIL
                     VGVDGSPKDIQVDKSSGYHELDRAAIEAARKWRFNPEVKNGKKVEGYARVPVTFNLNN
                     L"
     gene            complement(1595..2878)
                     /locus_tag="VFM52_07725"
     CDS             complement(1595..2878)
                     /locus_tag="VFM52_07725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017461662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HET8765094.1"
                     /translation="MKHTPLFTMLAGAALAFTFAAAPAMAKDKPAAQKTEYPNTTRVA
                     PKLDLTSEKEQRALNEGLDAVNAGDKAKAEQLLQPIIDSSKSKYAQAIALQGLANVNY
                     NAGDTKTAISMLQKSIGIGVMPNDTYFGLMYELAQLQLADQQYQASLDTLHKWRDEGK
                     RETADSHALEGNDYYRLEKYPEAIAAIQKAKTLTDKPQDSWNQILMASYAESGKGGDA
                     AKMAVAEYQKNPTDSGMLHNASAILLQQQDYAQAIKVLEQGRANGALKDEGDWINLVK
                     AYLLQAQNGGDTKTGSASALAVFDDGVAKGAIKPSADNYKLAGDAAMIGDDDAKAVGY
                     YQKGVPLATDGELDGALARAYFQQQKFGDARTWLTKALAKGVKRKGNTYMLLAESNRQ
                     LKDKPAAIAAMKEAAKDPETAAKAQEWLRKQAAGK"
     gene            complement(3066..5489)
                     /gene="gyrB"
                     /locus_tag="VFM52_07730"
     CDS             complement(3066..5489)
                     /gene="gyrB"
                     /locus_tag="VFM52_07730"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017461663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009330 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) complex [Evidence
                     IEA];
                     GO_function: GO:0003918 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) activity [Evidence
                     IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase (ATP-hydrolyzing) subunit B"
                     /protein_id="HET8765095.1"
                     /translation="MSSADVYDSSKIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFE
                     VLDNAIDEALAGFCDHILVTIHDDGSVSVVDNGRGIPVGIHPEEGVSTAEVVMTVLHA
                     GGKFDANSYKVSGGLHGVGVSVVNALSDHLWLTIWRNGHEHQQEYALGEPLYPLKVVA
                     DSDRRGTMVRFHPSTHTFTNIEFQYEVLAKRLRELAFLNSGVRIELVDERGEERRDVF
                     AYSGGIRSFVEHLAKMKTTLHPNVISLAASEPGGITVEVAMQWTDAYNETMFCFTNNI
                     PQRDGGTHLTGFRAALTRTLQNYIEKEGLAKNAKVGLSGDDMREGLIAVLSVKVPDPK
                     FSSQTKDKLVSSEVKTAVEQAVNEKLGEFLLEHPNDAKVIAGKVVDAARAREAARKAR
                     EMTRRKGALDIAGLPGKLADCQEKDPALCELFLVEGDSAGGSAKQGRNRKTQAVLPLK
                     GKILNVEKARFDKMLSSAEVGNLITALGTGIGKEDYNPDKLRYHRIVIMTDADVDGAH
                     IRTLLLTFFYRQMPELIERGHVYIGLPPLYKLKQGKQEIYLKDDEALNAYLISSAVDN
                     AALIADPHAPPITGERLEKLLRDYQTALDQIERLGHRFDTSVLSAVLEHTPLTPALWD
                     DPAAMQGWLDGVAKSLATRGLGKPRYRLSLRPAQGEHPAAIEVIRDQHGLSHTLLLPR
                     PFLAGPEFRPILAVSQALAGLIQPDAVIQRGTATRGVLRFADVRSWLLDEAKKGRTIQ
                     RFKGLGEMNPEQLWETTVNPETRRMLQVGIQDAYLADQMFSMLMGEAVEPRRDFIEEN
                     ALKVANLDI"
BASE COUNT          827 a         1727 c         1883 g         1069 t
ORIGIN      
        1 aattcatcga accgggcgaa gatcacgcgg ttcgaccggt tgaacgcgtt gaacgcgaac
       61 acggccggga tggcggtgaa caagccgatg gcggtcatga tcagcgcctc gccgaccggg
      121 ccggccaccg cgctcatcga ggcgttgccg gtcgcggcaa tgcggatcag ggcgtggtag
      181 atgccccaca cggtaccgag cagaccgacg tacaccgcgg cggagccgac cgtcgcgagc
      241 agcgtcaagc cggtttccat gcgcagcgtt tcgcgggcca cggcctggcg cagcgagcgg
      301 tcgaggaact cggaacggct gagcgactgg gccaggccgt tgttctcggc caccgcctgc
      361 tggtggtggg cgacggcggc ggcggcgtcg agcgcgatct tggagaacgg ttcgcccttg
      421 ggctgggcct cgagctcacg gatggcatcc tgcgtcgagg ggttgcccca gaacgcgtcg
      481 atcaccttgt tcgcccgcga cgtgaccacg aagttgcgga tggtgttggc gatgatgaag
      541 taccacgaca ggagcgagag caacaccagg acgatgaaga cgatccaacc caaggcgtcg
      601 aagttctcgg cgaggttggc gaagcccatc tgcttcatgg cttccgaatt ggtgttgccg
      661 gttggtgcag gagtctgtag gaacataacg ctacccttgg aaagtcaggc gtgaacggtg
      721 aggacggtaa ccggtattac aggttgttga ggttgaacgt gacgggtacg cgggcgtaac
      781 cctccacctt cttgccattc ttgacttcgg gattgaagcg ccacttgcgt gccgcctcga
      841 tcgccgcgcg atcaagttcg tggtagccgc tggacttgtc cacctggatg tccttcggcg
      901 aaccgtcgac ccccacgagg atcagcaggg tcacagtacc ttcgtgacgc tggcggatgg
      961 cctgcggcgg atacttcggc tggatccggc tgttgtagct gagatccgaa ccggcagcga
     1021 tgtccgcggg cggcgccggc ggtgccggcg gcgcgggagg cgctgcggca acggcgttct
     1081 gcgacacctc ggcaaccggc ggtggcggtg ccggcggcgg cggcgtcggc ggcgggacca
     1141 cctgcttgat gatcttcggc ggcggctgct tcggcggctc cggcggcggc ggcggcggcg
     1201 gcggtggcgg cggcggcggt tcgatgaagt tcacctgcac gatctggtct ttcttcacgt
     1261 gcttctgcga accggacgcc atcggcgcca tcaacacgag aaatgcgaaa gcgtgcagac
     1321 cgatggcaaa cgccaacgcc agggtgcgct tccaactgaa cccctcgcgc tctgagtctt
     1381 cgttacttga ggccatctga gactatctgg aactgggaac ggagaaagcg tcgccgcaag
     1441 cttgccacgt gtcgtccgac ctatggacgg caccggccgc ttgggatacg cagggaaggt
     1501 ttgaacggta caacagcatt cgccttttgt atagcaccca tgccttcgtc gaatggacgt
     1561 ccatttgcag acatggttgc cggcgctgcc ggccttactt gccggcagcc tgcttgcgca
     1621 gccactcctg ggccttggcg gcggtctccg ggtccttggc ggcctccttc atggcggcga
     1681 tcgcggccgg cttgtccttg agctggcggt tcgactcggc gagcagcatg taggtgttgc
     1741 ccttgcgctt cacgcccttc gccagtgcct tggtaagcca ggtgcgcgcg tcgccgaact
     1801 tctgctgctg gaagtacgcg cgggcaagtg cgccgtcgag ctcgccatcg gtcgccagtg
     1861 gcacaccctt ctggtagtag ccgaccgcct tcgcgtcgtc gtcgccgatc atcgcggcgt
     1921 cgccggcgag cttgtagttg tcggcgctgg gcttgatcgc gcccttggcc acgccgtcgt
     1981 cgaacacggc cagcgcgctg gcgctgccgg tcttcgtatc gccgccgttc tgcgcctgca
     2041 gcaggtaggc cttgaccagg ttgatccagt cgccctcgtc cttcagcgcg ccattggcgc
     2101 ggccctgctc cagcaccttg atcgcctggg cgtagtcctg ctgctgcagc aggatcgcgc
     2161 tggcgttgtg cagcatgccg ctgtcggtgg ggttcttctg gtattcggcc accgccatct
     2221 tcgccgcgtc gccgcccttg ccggattcgg cgtagctggc catcaggatc tggttccagg
     2281 aatcctgcgg cttgtcggtg agcgtcttgg ccttctggat ggccgcgatc gcctccgggt
     2341 acttttcgag acggtagtag tcgttgccct cgagcgcatg ggaatcggcg gtttcacgct
     2401 taccttcgtc gcgccacttg tgcagcgtgt cgagcgaggc ctggtactgc tggtcggcaa
     2461 gctgcagctg ggccaactcg tacatcaggc cgaaataggt gtcgttcggc atcacgccga
     2521 tgccgatcga cttctgcagc atgctgatcg cggtcttggt gtcgccggcg ttgtagttga
     2581 cgttggccag tccctgcagc gcgatcgcct gcgcgtactt gctcttgctg ctgtcgatga
     2641 tcggctgcag gagctgctcg gccttggcct tgtcgccggc gttcaccgcg tccaggcctt
     2701 cgttcagcgc cctctgctcc ttctcgctgg tgaggtcgag cttgggcgcg acgcgggtgg
     2761 tgttcggata ctcggtcttc tgcgccgccg gcttgtcctt cgccatggcg ggtgccgcgg
     2821 caaacgtgaa agccagcgcg gcgccggcca gcatggtgaa caagggcgtg tgcttcatga
     2881 cgatcctcat gtcgggtggt tacgcctggc ggcgcagggg atcgctgagc ctactctgag
     2941 caacaggtga atgacaagcg gcattgcgac aaaaaagctc ttgcggaatc aaccacttgc
     3001 acgttgacag cgccgtaccc gcgcgcacgg cgcaagccgg cgcaggggca cttcgccgga
     3061 ttgcgtcaaa tatcgaggtt ggcgaccttg agcgcgttct cctcgatgaa gtcgcgacgc
     3121 ggctcgaccg cctcgcccat cagcatcgag aacatctggt cggcaaggta ggcatcctgg
     3181 atgccgacct gcagcatgcg ccgggtttcc gggttgaccg tggtttccca cagctgctcc
     3241 ggattcatct cgcccaggcc cttgaagcgc tggatggtgc gccccttctt ggcctcgtcg
     3301 agcagccagc tgcgcacgtc ggcaaaccgc agcacgccgc gcgtggcggt gccgcgctgg
     3361 atcaccgcat cgggctggat caggccggcc agcgcctggc tcacggcgag gatcgggcgg
     3421 aactcggggc cggcgaggaa cgggcgcggc agcagcaggg tgtgcgacag gccatgctgg
     3481 tcgcggatca cctcgatggc cgcgggatgc tcgccctgtg ccgggcgcag cgacagccgg
     3541 tagcgcggct tgccgaggcc acgcgtggca aggctcttcg ccacgccgtc gagccagccc
     3601 tgcatcgcgg ccgggtcgtc ccacagcgcc ggcgtcagcg gcgtgtgttc gagcaccgcg
     3661 gagagcacgc tggtgtcgaa gcggtggccc aggcgttcga tctggtccag cgcggtctgg
     3721 tagtcgcgca gcagcttttc taggcgctca ccggtgatcg gcggcgcgtg cgggtcggcg
     3781 atcagtgccg cgttgtcgac cgcgctggag atcaggtagg cattcagcgc ctcgtcgtcc
     3841 ttgaggtaga tctcctgttt gccctgcttg agcttgtaca gcggcggcag gccgatatag
     3901 acgtggccgc gctcgatcag ctcgggcatc tgccggtaga agaaggtgag cagcaaggtg
     3961 cggatgtggg cgccgtcgac gtcggcatcg gtcatgatga cgatgcggtg gtagcgcagc
     4021 ttgtcggggt tgtagtcctc cttgccgatg ccggtgccga gcgcggtgat gaggttgccg
     4081 acctcggccg acgacagcat cttgtcgaag cgcgcttttt ccacgttgag gatcttgccc
     4141 ttgagcggca gcaccgcctg ggtcttgcgg ttgcggccct gcttggccga gccgccggcc
     4201 gaatcgccct cgaccaggaa cagctcgcac agcgccggat ccttctcctg gcagtcggca
     4261 agcttgccgg gcaggccggc gatgtccagc gcgcccttgc gccgagtcat ctcgcgcgcc
     4321 ttgcgcgccg cctcgcgggc acgcgccgca tcgaccacct tgcccgcgat caccttggcg
     4381 tcgttcgggt gctcgagcag gaattcgccg agcttctcgt tgacggcctg ctccaccgcg
     4441 gtctttacct cggaggaaac cagcttgtcc ttggtctgcg aggagaactt cgggtccggc
     4501 accttgaccg agagcaccgc gatcaggcct tcgcgcatgt cgtcgccgga gaggccgacc
     4561 ttggcattct tcgccagccc ttccttctcg atgtagttct gcagcgtgcg cgtcagcgcg
     4621 gcgcggaagc cggtgaggtg ggtgccgccg tcgcgctgcg ggatgttgtt ggtgaagcag
     4681 aacatcgtct cgttgtaggc gtcggtccac tgcatggcga cctcgaccgt gatgccgccc
     4741 ggctcgctgg ccgcgagact gatcacgttc gggtgcaacg tggtcttcat cttcgccagg
     4801 tgctcgacga aggagcggat gccgccggag tacgcgaaca cgtcgcggcg ctcctcgccg
     4861 cgctcgtcca ccagctcgat gcgcacgccg gaattcagga acgccagctc gcgcaaacgc
     4921 ttggccagca cctcgtactg gaactcgatg ttggtgaagg tgtgcgtgct cgggtggaaa
     4981 cgcaccatcg tgccgcgacg atcggagtcg gcgacgacct tgagcgggta cagcggttcg
     5041 cccagcgcgt attcctgctg gtgctcgtgg ccattgcgcc agatcgtcag ccacaggtgg
     5101 tcgctgagcg cgttgaccac ggaaacgccg acgccgtgca ggccaccgga aaccttgtac
     5161 gagttggcgt cgaacttgcc gccggcatgc agcacggtca tcaccacctc ggcagtggaa
     5221 acgccctctt ccgggtggat gccgaccggg atgccgcggc cgttgtcgac gacgctgacc
     5281 gagccgtcgt cgtggatggt cacgagaatg tggtcgcaga agccggcgag cgcctcgtcg
     5341 atcgcgttgt cgaggacctc gaacaccatg tggtggaggc cggtgccgtc gtcggtatcg
     5401 ccgatgtaca tgccgggccg cttgcggacg gcgtcaaggc cctttaagac tttgattttg
     5461 ctggagtcgt agacgtccgc ggagctcatg gaaaacctgg ctttgg
//
LOCUS       DASSVL010000439         2093 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1267063,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000439 DASSVL010000000
VERSION     DASSVL010000439.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2093)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2093)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2093
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1267063"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..524)
                     /locus_tag="VFM52_07735"
     CDS             complement(<1..524)
                     /locus_tag="VFM52_07735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003477658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004357 - glutamate-cysteine ligase
                     activity [Evidence IEA];
                     GO_process: GO:0042398 - cellular modified amino acid
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-cysteine ligase family protein"
                     /protein_id="HET8765096.1"
                     /translation="MSGPSHVAEQPIERRAQLVEYLAAGGRPAEQWKIGTEHEKFVFR
                     TDDLRPPPYEGERGIGALLEGVARCGWDPVEEDGNVIALARGAASVTLEPAGQLELSG
                     APLETIHQTCCEVQEHLDCVRRAAEPLRLGILGMGFQPKCKREDMPWMPKGRYAIMRR
                     YMPTVGSLGLDMMTR"
     gene            complement(714..1322)
                     /gene="yihA"
                     /locus_tag="VFM52_07740"
     CDS             complement(714..1322)
                     /gene="yihA"
                     /locus_tag="VFM52_07740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015446543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTP-binding protein
                     YihA/YsxC"
                     /protein_id="HET8765097.1"
                     /translation="MQASDNPLRGATFVLAAHRPDQLPPDAGAEIAFAGRSNAGKSSA
                     LNALAGQSALARTSKTPGRTQQLVVFALPDGRRLVDLPGYGYAKVPPSLRDHWRQAID
                     HYLRKRQSLRGLVLIADIRHALTPFDRQMLAYCAEIELPCVVLLSKADKFSRTQARTR
                     QREVDAEIAKQHWRAQTIGFSAPAGTGLDEARAAVAALLGGA"
     gene            1445..>2093
                     /locus_tag="VFM52_07745"
     CDS             1445..>2093
                     /locus_tag="VFM52_07745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017463727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HET8765098.1"
                     /translation="MLAASAPVAMALSAPQTQPESKPAASAPASASSAAAPASAESAS
                     KAAEAALAQLQGVKTQPGDAKAGQAKAAACGACHGMDGNSTDPQYPKLAGQNEQYIVS
                     QLMRFKSGTRQNAIMQGMASTLAPQDMHDVGAYFAAQKRLPGVADAKLASDGEKLYRD
                     GDTSRGIPACMACHGPDGAGNPGWRVPNIGGQHADYVQAQLKAWHDGASWGSDAHA"
BASE COUNT          335 a          733 c          706 g          319 t
ORIGIN      
        1 cgggtcatca tgtcgaggcc gagcgaaccg accgtcggca tgtagcggcg catgatcgcg
       61 tagcggccct tgggcatcca cggcatgtct tcgcgcttac acttcggctg gaagcccatg
      121 ccgaggatgc cgagccgcag cggctcggcc gcgcggcgca cgcagtcgag gtgttcctgc
      181 acttcgcaac aggtctggtg gatggtttcc agcggcgcgc cggaaagttc cagctgaccg
      241 gcgggttcca gtgtcaccga cgccgcgccg cgcgccagcg cgatcacgtt gccgtcttcc
      301 tccaccggat cccagccgca acgagcgacg ccttccagca aggcgccgat gccgcgctcg
      361 ccttcatacg gcggcggccg caagtcgtcg gtgcggaaca cgaacttctc gtgctcggtg
      421 ccgatcttcc actgctccgc gggccggccg cccgcagcga gatattccac gagttgcgcg
      481 cgccgttcga tcggttgttc ggcaacgtgg ctgggacccg acatgcgcgc gccttcaatg
      541 gggcaaggcg atcaagatgg ggtggcgtca tgcgtagcgc aagtggctgg cgacgcatga
      601 tcttcaaggc cagcgctttt gacatggatc aaagtggggc acaagccggc agccgcttca
      661 aatgatccgc tgcgatccgc tctgatccgc gtccgaaatg cccttcgcgt ttctcacgcc
      721 ccgcccagca acgccgccac cgcggcgcgc gcttcgtcga ggccggtgcc ggccggcgcc
      781 gagaatccga tggtctgcgc gcgccagtgt tgtttggcga tttccgcatc gacctcgcgc
      841 tgacgcgtgc gtgcctgcgt gcgcgaaaac ttgtcggcct tgctgagcag caccacgcac
      901 ggcagctcga tttcggcgca gtaggccagc atctggcgat cgaagggcgt cagcgcgtgg
      961 cggatgtcgg cgatcagcac cagcccgcgc agcgactggc gcttgcgcag gtaatgatcg
     1021 atcgcctgcc gccagtggtc gcgcaagctc ggcggcacct tggcgtaacc gtagcccggc
     1081 aggtccacca gccggcggcc gtccggcagc gcgaacacca ccagttgctg ggtgcgaccc
     1141 ggcgtcttgc tggtgcgtgc gagcgccgat tggccggcca gcgcgttgag ggccgacgac
     1201 ttgccggcgt tggagcgccc ggcgaacgcg atttccgcgc ccgcgtccgg cggcaactgg
     1261 tcggggcgat gcgccgccag cacgaacgtc gcgccgcgaa gcgggttgtc ggatgcctgc
     1321 acgtttgacc acctttcctg ccgcggcgat aatcccgcgg ttcgcgccgg cccttagtgc
     1381 cggtgctcat gcttacggga gagaggattc tatgggtttc cggcgctcag cagctgtcct
     1441 tgtcatgctc gccgcctcgg cgccggtcgc gatggcgctg tccgcgccgc agacccagcc
     1501 cgagtcgaaa ccggccgcga gcgcgcccgc cagcgcatcc agcgccgccg caccggccag
     1561 cgcggaaagc gcatccaagg ccgcggaagc cgcgcttgca cagcttcaag gcgtgaagac
     1621 ccagcccggc gacgccaagg cgggccaagc caaggccgcc gcgtgcggcg cctgccacgg
     1681 gatggacggc aactccaccg acccgcagta tcccaagctc gccggccaga acgagcagta
     1741 catcgtcagc cagttgatgc gcttcaagag cggcacccgc cagaacgcga tcatgcaggg
     1801 catggcctcc acgttggcgc cgcaggacat gcacgacgtc ggcgcgtact tcgccgcgca
     1861 gaagcgcctg ccgggcgtgg ccgacgcgaa actggccagc gatggcgaga agctctaccg
     1921 cgatggcgat accagtcgcg gcatcccggc ctgcatggcc tgccatggcc ccgacggcgc
     1981 gggcaatccc ggctggcgcg tgccgaacat cggcggccag cacgccgatt acgtacaggc
     2041 gcaactgaag gcctggcatg acggcgcaag ctggggcagc gatgcccacg cca
//
LOCUS       DASSVL010000440         2151 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_38479, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000440 DASSVL010000000
VERSION     DASSVL010000440.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2151)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2151)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2151
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_38479"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            50..1897
                     /gene="edd"
                     /locus_tag="VFM52_07750"
     CDS             50..1897
                     /gene="edd"
                     /locus_tag="VFM52_07750"
                     /EC_number="4.2.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007080597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004456 - phosphogluconate dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009255 - Entner-Doudoroff pathway through
                     6-phosphogluconate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphogluconate dehydratase"
                     /protein_id="HET8765099.1"
                     /translation="MTTLHPVVAEVTARIVERSRATRSAYLARIDAAKAQGVYRHRLG
                     CSNLAHSFAAAPDPDKSKLRGKITPNIGIVTAYNDMLSAHQPYEPYPVQIRQAARLVG
                     AVAQVAGGVPAMCDGITQGRAGMELSLFSREVIAMAAAVALSHDTFDAALMLGICDKI
                     VPGLLTAALSFGHIPTILVPAGPMTSGLSNPEKSKVRQAYAEGKASQADLLEAEAGAY
                     HAPGTCTFYGTANSNQMLMEIMGVHLPGASFVHPNTPLREALTRAATFRAAQITALGS
                     DYTPIGHVLDERAIVNGIVGLHATGGSTNHLLHLVAVARAGGIVLTLDDFDALSAVVP
                     LMARVYPNGSADVNTFHQAGGMPFLIGSLLDAGLLHADVQTVWGKGLAPYRKMPALDA
                     SGRLVWNDVGDSGNLDVLRPATEPFRKDGGLRVLRGNLGCAVIKVSSIPDDRKVVEAP
                     ALIFNDQEEVQAAFNRGELNRDFVAVVRFQGPKAIGMPELHKLTPPLSVLQARGHKVA
                     LITDGRMSGASGKVPAAIHVTPEAIDGGAIGKLREGDIVRLDAEAGTLDAKVDAAEWA
                     AREQPHIDLSAHHVGMGRELFAPFRNAVGTADAGVTVFGTVDRHHLADA"
     gene            2011..>2151
                     /locus_tag="VFM52_07755"
     CDS             2011..>2151
                     /locus_tag="VFM52_07755"
                     /EC_number="4.1.2.14"
                     /EC_number="4.1.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007510278.1"
                     /note="catalyzes the formation of pyruvate and glyoxylate
                     from 4-hydroxy-2-oxoglutarate; or pyruvate and
                     D-glyceraldehyde 3-phosphate from
                     2-dehydro-3-deoxy-D-glyconate 6-phosphate; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="keto-deoxy-phosphogluconate aldolase"
                     /protein_id="HET8765100.1"
                     /translation="MTSQETKQQQLADLLALAPVVPVVIVDDVAHAVPMARALVAGGI
                     RTI"
BASE COUNT          344 a          815 c          689 g          303 t
ORIGIN      
        1 ggcccgtttc tcgccagccc tcgatccacc ggtgtcccgg agtaccgcca tgaccacgct
       61 ccaccccgtc gtcgccgaag tcaccgcccg catcgtcgag cgcagccgcg ccacgcgcag
      121 cgcctatctc gcccgcatcg acgccgcgaa ggcgcaaggc gtatatcgcc accggctcgg
      181 ctgctccaac ctcgcgcaca gctttgccgc cgcgccggac ccggacaagt cgaagctgcg
      241 cggcaagatc acgccgaaca tcggcatcgt caccgcgtac aacgacatgc tctcggcgca
      301 ccagccgtac gagccctacc ccgtgcagat ccgccaggcc gcgcgcctcg tcggcgcggt
      361 ggcgcaggtg gccggcggcg tgccggcgat gtgcgacggc atcacccagg gtcgcgccgg
      421 catggagctg agcctgttct cgcgcgaagt gatcgcgatg gcagccgccg tcgcgctctc
      481 gcacgacacc ttcgatgccg cactgatgct cggcatctgc gacaagatcg tgccggggct
      541 gctcaccgcc gcgctgtcgt tcggccacat tcccaccatc ctggtgccgg ccggaccgat
      601 gaccagcggc ttgtcgaacc cggagaaatc caaggtgcgc caggcctatg ccgagggcaa
      661 ggcgagccag gcggacctgc tggaagccga ggccggcgcc taccacgcgc cgggcacctg
      721 caccttctac ggcaccgcca actccaacca gatgctgatg gagatcatgg gcgtgcacct
      781 gcccggcgcg agcttcgtgc acccgaacac gccgctgcgc gaggcgctga cccgcgccgc
      841 gacgttccgc gccgcgcaga tcaccgcgct cggcagcgac tacacgccga tcggccacgt
      901 gctcgacgag cgcgccatcg tcaacggcat cgtcggcctg cacgccaccg gcggctcgac
      961 caaccatctc ctgcacctcg tcgccgtcgc ccgcgccggc ggcatcgtgc tcacgctgga
     1021 cgatttcgat gcgctgtcgg ccgtggtgcc gctgatggcg cgcgtgtacc cgaacggcag
     1081 cgccgacgtg aacaccttcc accaggccgg cggcatgccg ttcctgatcg gatccctgct
     1141 cgacgccgga ctgctgcatg cggacgtcca aaccgtgtgg ggcaagggcc tcgccccata
     1201 ccgcaagatg ccggcgctgg atgcgagcgg acgcctggtg tggaacgacg tcggcgacag
     1261 cggcaacctc gacgtgctgc gcccggcgac cgagccgttc cgcaaggacg gcggcctgcg
     1321 cgtgctgcgc ggcaacctcg gctgcgcggt gatcaaggtg tcctcgatcc cggacgaccg
     1381 caaggtggtc gaggcgccgg cgctgatctt caacgaccag gaagaggtgc aggccgcgtt
     1441 caaccgcggc gagctcaacc gcgacttcgt cgccgtggtg cgcttccagg gcccgaaggc
     1501 gatcggcatg cccgagctgc acaagctcac cccgccgctc tcggtgctgc aggcgcgcgg
     1561 tcacaaggtg gcgctgatca ccgacggccg catgtccggc gcctcgggca aggtgccggc
     1621 cgcgatccac gtcacccccg aggccatcga cggcggcgcg atcggcaaac tgcgcgaagg
     1681 cgacatcgtg cgcctcgacg ccgaggccgg cacgctggac gccaaggtcg atgccgccga
     1741 atgggccgcg cgcgagcagc cgcacatcga cctctccgcg catcacgtcg gcatggggcg
     1801 cgaactgttc gccccgttcc gcaacgcggt cggcactgct gatgccggcg tgacggtgtt
     1861 cggcaccgtc gaccggcacc acttggccga tgcgtgacgt cacatcaccg ggagcagggt
     1921 ctgtttccca aaccgttcgg ccgcaaccgg gcacttcgta agactggctc tgccccctat
     1981 cgccccttac ctatcaccca tgagcccgcc atgacttcgc aggaaaccaa acaacaacaa
     2041 ctcgccgacc tgctcgcgct cgccccggtg gtgccagtgg tgatcgtcga cgacgtcgcc
     2101 cacgcggtac cgatggcgcg cgcgctggtc gccggcggca tccgcacgat c
//
LOCUS       DASSVL010000441         2422 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1365861,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000441 DASSVL010000000
VERSION     DASSVL010000441.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2422)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2422)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2422
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1365861"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            96..890
                     /locus_tag="VFM52_07760"
     CDS             96..890
                     /locus_tag="VFM52_07760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017907194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HET8765101.1"
                     /translation="MDLQLTGKIAFVSGSTAGIGLATAQRLAREGARVVVNGRTHERV
                     EAAVARIRQGVAGAEVSGVAADLGTAAGVATAVAAVPRVDVLVNNLGIFEVKAFDAIT
                     DADWLRFFEVNVMSGVRLARAWLPGMRERDWGRIVFVSSESALDIPLEMIHYGMTKTA
                     QLAIARGLAESLAGTGVTVNSVLPGPTASEGVTRFVGEMARDRHTDVATMEQEFFATA
                     RPSSLLKRFITPDEVANLIAYVASPLASATTGSALRVDGGVVRAVA"
     gene            complement(936..>2422)
                     /locus_tag="VFM52_07765"
     CDS             complement(936..>2422)
                     /locus_tag="VFM52_07765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007808390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HET8765102.1"
                     /translation="LVLGLRGKWNGWRWDVSANAGGNRVSYMTRDSMNYAYLHDFGTT
                     PTAFHDGILKSSQQVFDVDLAKDFNPTWLPNPLTVAFGSEWLRQGYQIAAGDLPSWYV
                     GTSGTSGGAQGFAGWQPANAVNGARHSTAEYLDFETNLTDKLGASLAVRHVNYSDFGG
                     TNSGALSLRYDFTDSFALRGSVSNGFRAPSLGQEYFSQISSLFVANGTLPGLPGGIYN
                     RGLVPVGSPIASLLGAEALKPEKSRNYTLGAVWNPTDALSLSLDVYQINIANRIALSG
                     AISTTTPAVVSYLAANGITNLDFSSINYFTNAADTRTRGVDFVGTYVSDFGNAGKLTS
                     TLTANYNQNEVTYVKPNPAVLSNLGVAFVRLSRQDIKGYLANSSPRSKLIWNELYEVG
                     PWSFTGTLTRYGRYTNYVSNIASYNPTTGVVDQTYRPSWVFDVAGNYRWQAWTFTLGV
                     DNALNIHPNKAIANNSNNGTLPYSTFAPFGYNGAYVYGKVRYSW"
BASE COUNT          355 a          746 c          897 g          424 t
ORIGIN      
        1 cggcggggag cgatccccgc cggctttttc atggcgtgac ggccggtatg cagcgtggcg
       61 cgtagagttt cgccatcgca acgtggagac agcacatgga tcttcagctc accggcaaga
      121 tcgcgttcgt cagcggttcg accgccggca tcggcctcgc gacggcgcag cggctggcgc
      181 gtgagggcgc gcgtgtcgtc gtcaacggac gcacgcacga gcgcgtggag gctgccgtcg
      241 cgcgcatccg ccagggcgtc gccggtgccg aggtgtctgg cgtggctgcc gacctgggca
      301 cggcggccgg tgtagcgacg gcggtcgcgg cggtgccgcg cgtcgatgtg ctggtcaaca
      361 atctcggcat cttcgaggtc aaggcgttcg acgcgatcac cgatgcggat tggctgcgct
      421 tcttcgaggt gaacgtgatg tcaggcgtgc gcctggcgcg cgcgtggctg cccggcatgc
      481 gcgagcggga ctgggggcgc atcgtgttcg tgtcgagcga atcggcactc gacattccgc
      541 tggagatgat ccactacggc atgaccaaga ccgcgcagct ggccattgcc cgcgggctcg
      601 ccgagtcgct ggccggcacc ggggtcacgg tgaacagcgt gctgcccggc ccgaccgcct
      661 cggaaggcgt cacccggttc gtgggcgaga tggcgcggga tcggcacacc gacgtggcga
      721 cgatggagca ggagttcttc gcgaccgcgc ggccgtcgtc gctgctcaag cgcttcatca
      781 cgccggatga ggtcgcgaac ctcattgcct acgtggcgag cccgctcgcg tcggcgacga
      841 ccggctcggc gctgcgcgtc gacggcggcg tcgtgcgcgc cgtcgcctga cgccggctgc
      901 cgccgcgacg attccgcgcc gtggcggcgc atgcctcacc agctgtagcg caccttgccg
      961 tacacgtagg cgccgttgta gccgaacggg gcgaaggtgg aatacggcag cgtgccgttg
     1021 ttcgagttgt tcgcgatcgc cttgttcggg tggatgttga gcgcgttgtc gacgcccagc
     1081 gtgaacgtcc aggcctgcca gcggtaattg ccggccacgt cgaacaccca gctcgggcgg
     1141 taggtctggt ccaccacgcc ggtcgtcggg ttgtagctgg cgatgttcga cacgtagttg
     1201 gtgtagcgcc cgtagcgggt gagcgtgccg gtgaagctcc acgggccgac ctcgtacagc
     1261 tcgttccaga tcagcttgct gcgcggcgag gagttggcga ggtagccctt gatgtcctgc
     1321 cggctcaggc gcacgaaggc gacgcccagg ttgctgagca ccgccgggtt cggctttacg
     1381 taggtgacct cgttctggtt gtagttggcg gtgagcgtgc tggtcagctt gccggcgttg
     1441 ccgaagtcgg acacgtaggt gccgacgaaa tccacgccgc gcgtacgggt gtcggccgcg
     1501 ttggtgaagt agttgatgct gctgaagtcg aggttggtga tgccgttggc ggccaggtag
     1561 ctcaccactg ccggtgtggt ggtggagatc gcgccggaca acgcgatgcg gttggcgata
     1621 ttgatctggt agacgtcgag gctgaggctc agcgcgtcgg tcgggttcca taccgcgccg
     1681 agggtgtagt tgcgcgactt ctccggcttc agcgcctcgg cgccgagcaa cgacgcgatc
     1741 gggctgccca ccggcaccag gccgcggttg tagatgccgc ccggcaggcc gggcagggtg
     1801 ccgttggcga cgaacagcga ggagatctgc gagaagtatt cctgccccag cgacggcgcg
     1861 cggaaaccgt tggacacgct gccgcgcagt gcgaagctgt cagtgaagtc gtagcgcagc
     1921 gacagcgcgc cggagttggt gccgccgaag tcggagtagt tcacgtggcg caccgccagc
     1981 gatgcgccga gcttgtcggt gaggttggtt tcaaagtcga ggtactcggc ggtggagtgc
     2041 cgcgcgccgt tcaccgcgtt tgcgggctgc cagccggcga aaccctgcgc gccgcccgag
     2101 gtgcccgagg tgccgacgta ccacgacggc aaatcaccgg cggcgatctg gtagccctgg
     2161 cgcagccact cgctgccgaa cgcgacggtg agcgggttgg gcaaccaggt cgggttgaag
     2221 tccttggcca ggtccacgtc gaacacctgc tggctcgact tgagaatgcc gtcgtggaac
     2281 gccgtcggcg tggtgccgaa gtcgtgcagg taggcgtagt tcatcgagtc gcgggtcatg
     2341 tacgagacgc ggttgccgcc ggcattggcc gacacgtccc agcgccagcc gttccacttg
     2401 ccgcgcaggc cgagtaccag cg
//
LOCUS       DASSVL010000442         2149 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_320297, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000442 DASSVL010000000
VERSION     DASSVL010000442.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2149)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2149)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2149
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_320297"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1304)
                     /locus_tag="VFM52_07770"
     CDS             complement(<1..1304)
                     /locus_tag="VFM52_07770"
                     /inference="COORDINATES: protein motif:HMM:NF012935.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GMC family oxidoreductase N-terminal
                     domain-containing protein"
                     /protein_id="HET8765103.1"
                     /translation="MDEFDYVVVGAGSAGCAVAARLSEDPAARVALVEAGGEDESVLI
                     RAPLGFALAAKIGRHVLRYQTVPQPGLAGRRGFQPRGKVLGGSSAINAMIYCRGHRSD
                     YDGWAAAGNPGWDHESVLPCFRRAEGTECYADNTWHNTTGPLGVSWLRSPFPSTLAFL
                     DACAASGLAQTDYNGARQEGSSLAQVTMRGGERCSAARAYLAPIRSRANLAVFTDTPT
                     LRLVFDGRRAIGIEVLRGDKRVRLAARREVIVCAGAYGSPQLLMCSGIGAAATLGEHG
                     IAVVHELPGVGQNLQDHITASLNWHSPRRDAGLALSPSGVLDLWRAISQWRRERRGPI
                     TSNVAEAVGFLRSDPTLDAPDIELEFLSAMVDDHNRRMHLGHGIGLHVTLLRPASRGE
                     VRIASRDTRDAPLIDPRYFSAAADMPRLVRGVQRALAIMDAAP"
     gene            complement(1310..>2149)
                     /locus_tag="VFM52_07775"
     CDS             complement(1310..>2149)
                     /locus_tag="VFM52_07775"
                     /inference="COORDINATES: protein motif:HMM:NF013086.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HET8765104.1"
                     /translation="AGEMWNYAAGIAHPQPQFPGHGLSLIPAKSALWLDHHGRRIGPE
                     PLVTGFDTHWLCRRVAEQAQPWTWQLMNRRIALREFAISGAEHNLRIREKQFIRFLAE
                     TLFGNRRLVAQMERESADFLVDATLPGLAAKMNALTGTQDVDATQLAATVAAFDANFA
                     HGARLEDDMQLRLIRHARQWGPDRLRTCKPAPLTKPGAGPFIAIRTRLITRKSLGGLR
                     TDLSSRVLDAAGAPIPGLYAVGEAAGFGGGGASGRRSLEGTFLPGCILTARAAARAIN
                     HGG"
BASE COUNT          313 a          780 c          741 g          315 t
ORIGIN      
        1 ggcgcggcat ccatgatcgc caacgcgcgc tgcacgccgc gcaccaggcg cggcatgtcg
       61 gcggcggcgc tgaaatagcg cgggtcgatc agcggcgcat cgcgcgtgtc gcggctggcg
      121 atgcgcacct cgccgcggct cgccgggcgc agcagcgtca catgcaggcc gatgccgtgg
      181 cccaggtgca tcctgcggtt gtggtcgtcc accatcgcgg acaggaactc cagctcaatg
      241 tccggtgcat ccagcgtggg atcgctgcgc aggaaaccga ccgcctcggc gacgttgctg
      301 gtgatcggcc cgcgccgttc gcgccgccat tggctgatcg cgcgccacag gtcgagcacg
      361 ccggaaggcg acagcgccag ccccgcatcg cggcgcggcg aatgccagtt gaggctggcg
      421 gtgatgtgat cctgcaggtt ctgcccgacg cccggcagct cgtgcaccac ggcgatgccg
      481 tgctcgccca gcgtcgccgc cgcaccgatg ccggaacaca tcagcagctg cggcgagccg
      541 tacgcaccag cgcatacgat cacctcgcgc cgcgcggcaa ggcgcacgcg cttgtcaccg
      601 cgcagcacct cgatgccgat ggcgcggcgg ccgtcgaaca ccagccgcag cgtcggcgtg
      661 tcggtgaaca ccgcaaggtt cgcgcggctg cggatcggcg cgagatacgc gcgcgccgcg
      721 ctgcaccgtt cgccgccgcg catcgtcacc tgcgccaggc tcgacccttc ctgccgcgcg
      781 ccgttgtagt cggtctgcgc caggcctgaa gccgcgcacg cgtcgaggaa cgcgagcgtg
      841 ctcgggaacg ggctgcgcaa ccagctgacg ccaagcggcc cggtcgtgtt gtgccacgtg
      901 ttgtcggcgt agcactccgt gccttccgca cgcctgaaac acggcagcac gctttcgtga
      961 tcccagccgg ggttgccggc cgccgcccag ccgtcgtaat cgctgcgatg accgcggcag
     1021 tagatcatcg cgttgatcgc gctgctgccg cccagcacct tgccgcgcgg ctggaatccg
     1081 cgccgcccgg ccaggcctgg ctgcggcacg gtctggtagc gcagcacgtg gcggccaatt
     1141 tttgccgcca gcgcaaagcc cagcggcgcg cggatcagca cgctctcgtc ttcgccgcca
     1201 gcctcgacca acgcgacgcg agcggccggg tcttcgctca gccgcgcggc caccgcacaa
     1261 ccggccgagc cagcccccac cacgacgtag tcgaattcat ccataaccat catcccccgt
     1321 ggttgatcgc ccgcgccgcc gcccgcgcgg tgaggatgca gccgggcagg aacgtgcctt
     1381 cgagcgaacg cctgccgctg gcgccgcctc caccgaagcc cgccgcctcg cctaccgcat
     1441 acaagccggg gatcggcgca cccgccgcat ccagcacgcg gctggacagg tcggtgcgca
     1501 ggccgccaag gctcttgcgc gtgatgagcc gcgtgcggat cgcgatgaac ggtccggcgc
     1561 ccggtttcgt cagcggcgcc ggcttgcagg tgcgcaagcg gtccggtccc cactgccgcg
     1621 cgtggcggat caggcgcagc tgcatgtcgt cttcgaggcg cgcaccgtgc gcgaaattcg
     1681 catcgaatgc ggcgacggtg gcggcaagct gcgtcgcgtc cacgtcctgg gtgccggtca
     1741 gcgcattcat ttttgcggcg aggccgggca gcgtggcgtc gacgaggaaa tccgcgctct
     1801 cgcgttccat ctgcgccacg aggcggcggt tgccgaacag ggtttcggcg aggaagcgga
     1861 tgaattgctt ctcgcggatg cgcaggttgt gttcggcacc ggagatcgcg aactccctga
     1921 gcgcgatgcg ccggttcatc agctgccacg tccacggctg tgcctgctcg gcgacgcgcc
     1981 ggcacagcca gtgggtgtcg aaaccggtca ccagcggttc cgggccgatg cgccggccat
     2041 ggtggtcgag ccacaacgcc gacttcgccg ggatcagcga caggccgtgg ccggggaatt
     2101 gcggctgcgg atgcgcgatg ccggccgcgt agttccacat ctcgccggc
//
LOCUS       DASSVL010000443         2245 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_744590, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000443 DASSVL010000000
VERSION     DASSVL010000443.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2245)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2245)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2245
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_744590"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..147)
                     /locus_tag="VFM52_07780"
     CDS             complement(<1..147)
                     /locus_tag="VFM52_07780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014401823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate epimerase"
                     /protein_id="HET8765105.1"
                     /translation="MLAFSKMHGLGNDFVVLDCRSAPFALDEPAIRALAHRRTGVGFD
                     QLLSI"
     gene            complement(156..326)
                     /locus_tag="VFM52_07785"
     CDS             complement(156..326)
                     /locus_tag="VFM52_07785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008207786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HET8765106.1"
                     /translation="MRRLLLLCLAAATLAGCGNKGPLVLPTKPPAAAPATAPASAAST
                     PAPAHSAPAPQR"
     gene            431..1111
                     /locus_tag="VFM52_07790"
     CDS             431..1111
                     /locus_tag="VFM52_07790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007510005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8765107.1"
                     /translation="MNVIELLRQPATLLLVLAAVLLLLGLVQLLASRRCLDAGARWPA
                     AGRALACFVLLVLAVLLGAGGFALRSYRVLDADTSVVEVDAHILSPQHWQLAFAWPDG
                     STRHADLVGDDWRVEAVLLAGAPGSWLARLPALYRLDRIDARADDTTTPAQTLVVPDA
                     AGGFDLAALRAQFPAALADIAAMHAAGDFVPLVDGGHYSIRLARDGRLRAQPDDATAQ
                     RINSPLGR"
     gene            complement(1089..1568)
                     /locus_tag="VFM52_07795"
     CDS             complement(1089..1568)
                     /locus_tag="VFM52_07795"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019464168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HET8765108.1"
                     /translation="MTPAAAVRVRRAELFDLDDLVALEERSFDGDRLSRAQYRRHLDS
                     DSAKVLVASAGPHRFLGTAVLFFRKHSRVARLYSIATSPEARGRGVGSALLAAADRLA
                     RRQRCNALRLEVRIDNAGAIRLYERLGFRRIGQLAGYYEDGVDAWRYERAVSDPAAS"
     gene            1783..>2245
                     /locus_tag="VFM52_07800"
     CDS             1783..>2245
                     /locus_tag="VFM52_07800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017461685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RimK-like ATPgrasp N-terminal domain-containing
                     protein"
                     /protein_id="HET8765109.1"
                     /translation="MTRLVIVVEKASDWGSYYPSADVVTAMDYLREPVGRDDERTHVI
                     NLCRSYKYLGAGYYVSLLAEARGHKVLPSVRTINDLRRRSLYGVDIDDLNGNLTHFLP
                     AGGRDTTDFGTLVYFGETAYPALQDLARQVFETFPCPLLRIEFERDRVWQVS"
BASE COUNT          298 a          786 c          813 g          348 t
ORIGIN      
        1 gatgctgagt agctggtcga agccgacgcc ggtgcgacgg tgcgccagcg cgcggatcgc
       61 gggctcatcc agcgcgaacg gcgcgctgcg gcaatcgagc acgacgaagt cgttgcccag
      121 gccgtgcatc ttgctgaacg ccagcatcgg cgcgctcacc gctgtggcgc gggcgcactg
      181 tgcgctgggg ccggcgtcga tgcggcgctg gcaggtgccg ttgccggcgc cgcggccggc
      241 ggctttgtcg gcagcaccag cggccccttg ttgccgcagc cggcgagcgt ggcggcggcg
      301 aggcagagca gcagcagacg gcgcatgggg cggttacctg tacggggcgc gaggtgctcc
      361 gcagtatagc gacgcggccc gccggcccgc cggcttatca tgcgcacgcc tttttgcgtg
      421 gaacctcggg atgaacgtga tcgagctgct gcgccagccg gccaccttgc tgctggtgct
      481 ggccgcggtg ctgctgctgc tcggcctggt gcagctgctg gcgtcgcggc gttgcctcga
      541 tgccggcgcg cggtggccgg cggccggccg ggcgctggcg tgcttcgtcc tgctggtgct
      601 ggccgtgctg cttggcgccg gcggctttgc gctgcgcagc taccgcgtgc tggatgccga
      661 caccagcgtg gtcgaggtcg acgcgcacat cctgtcgccg cagcactggc agctggcatt
      721 cgcctggccg gatggcagca cgcggcacgc cgacctggtc ggggatgact ggcgggtgga
      781 agcggtgctg cttgccggcg cgcctggttc gtggctggca cggctgccgg cgctgtaccg
      841 gctcgaccgc atcgacgccc gcgcggacga caccaccacg ccggcgcaga ccctcgtggt
      901 gccggatgcc gccggcggct tcgacctcgc cgcgctgcgc gcgcagttcc ccgcggcgct
      961 ggcggacatc gccgccatgc atgccgcggg cgatttcgtg ccgctggtcg acggcgggca
     1021 ttacagcatc cggctggcac gcgacggtcg cctgcgcgcg caaccggacg acgccaccgc
     1081 gcaacggatc aactcgccgc tgggtcgctg accgcccgct cgtagcgcca cgcgtcgacg
     1141 ccgtcctcgt agtagccggc gagctggccg atgcggcgga aacccagccg ctcgtagagc
     1201 cggatcgcgc cggcgttgtc gatgcgaacc tccagccgca gcgcattgca gcgctggcgc
     1261 cgcgcgaggc gatcggcggc ggcgagcagg gcactgccca cgccgcgccc gcgcgcttcc
     1321 ggggaggtcg cgatcgaata cagccgcgcc acgcggctgt gcttgcggaa aaacagcacc
     1381 gcggtgccga ggaaccggtg cgggccggcg ctggccacca gcactttcgc gctgtcgctg
     1441 tccaggtgcc ggcggtactg cgcgcggctc aggcggtcac cgtcgaaact gcgttcttcg
     1501 agcgccacca ggtcgtcgag atcgaacagt tcggcgcggc gcacgcgcac ggcagcggca
     1561 ggtgtcatcg atcacggcct ccatggggaa acggacggcc acgcggcacg accggggcga
     1621 atgtagtgcg cgcgccagga tgcgacaacg ccggcccgcg cagtgtttac gctcgcttca
     1681 gcgcagccgg ttgtacgcat tcgtcactgt gcgacactgc gccccttgct gccgcgcggc
     1741 cgcgccggcg cggtgccttt tcgtgcttgc ctgagtgatg acatgacccg tctggtcatc
     1801 gtggtcgaga aagcctcgga ctggggttcg tactacccat cggcggacgt ggtcacggcg
     1861 atggattacc tgcgcgagcc ggttggccgc gacgacgaac gcacccacgt catcaacctg
     1921 tgccgcagct acaagtatct cggcgccggc tactacgtgt cgctgctggc cgaggcacgc
     1981 gggcacaagg tgctgccatc ggtgcgcacc atcaacgacc tgcgccggcg ttcgctgtac
     2041 ggcgtggaca tcgacgacct caacgggaac ctcacccact tcctgccggc cggcggccgc
     2101 gacaccacgg atttcggcac cctggtgtac ttcggcgaga ccgcctaccc ggcactgcag
     2161 gatctcgcgc ggcaggtgtt cgagaccttc ccgtgcccgc tgctgcgcat cgagttcgag
     2221 cgcgaccgcg tgtggcaggt cagct
//
LOCUS       DASSVL010000444         4841 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1140214,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000444 DASSVL010000000
VERSION     DASSVL010000444.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 4841)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4841)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4841
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1140214"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..490)
                     /gene="dcd"
                     /locus_tag="VFM52_07805"
     CDS             complement(<1..490)
                     /gene="dcd"
                     /locus_tag="VFM52_07805"
                     /EC_number="3.5.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005912996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008829 - dCTP deaminase activity
                     [Evidence IEA];
                     GO_process: GO:0009394 - 2'-deoxyribonucleotide metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dCTP deaminase"
                     /protein_id="HET8765110.1"
                     /translation="MTIKSDKWIRRMAESQRMIEPFESGQCKTLEDGRRAVSWGTSSY
                     GYDVRCAREFKIFTNINSTIVDPKAFDPASFVDVVSDVCIIPPNSFALARTVEYFRIP
                     RDVLVVCLGKSTYARCGIIVNVTPLEPEWEGHVTLEFSNTTPLPAKISANEGVAQMLF
                     FQS"
     gene            complement(584..1681)
                     /gene="apbC"
                     /locus_tag="VFM52_07810"
     CDS             complement(584..1681)
                     /gene="apbC"
                     /locus_tag="VFM52_07810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007512921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster carrier protein ApbC"
                     /protein_id="HET8765111.1"
                     /translation="MTQVNEALVRQLLGAVIDSHTGAPLGNAIRAVGVDGAKVSVDLL
                     IGYPAASAIEAITQQAKQALEASAEIESAAVSVTTRIQSHKVQGTLGPLPNVKNIIAV
                     ASGKGGVGKSTVAANLALALKAEGAKVGVMDADIYGPSQPRMLGINAKPESPDGKSIV
                     PLEAHGVQIMSIGFLVEEDTPMIWRGPMVTQAMMQLITDSRWNMLDYMIIDLPPGTGD
                     IQLTLAQKVPVSGVVVVTTPQDLALIDVSRAIKMFEKVEVSVLGIVENMATHVCSNCG
                     HEEHIFGEGGGERMAERYKVPLLGSLPLDIRIREQTDGGNPTVDAIPDSELSARYREI
                     ARNTAGRLSLLPRNKSLGLGKIVVRGVPGAA"
     gene            1839..2300
                     /locus_tag="VFM52_07815"
     CDS             1839..2300
                     /locus_tag="VFM52_07815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017460382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2147 domain-containing protein"
                     /protein_id="HET8765112.1"
                     /translation="MKPIACLALAFGLLLTAGPVLAANDTPAGTWKTIDDATHQAKSI
                     VEISEHDGEYQAKIVKLLNRSPADIQRDGEVALCHACDGARKDKPIEGMVIMWGVRQD
                     GDAWDGGKILDPKNGKTYKVKLSMLDGGRKLDVHGYIGFALLGRSQVWERQ"
     gene            complement(2319..3116)
                     /locus_tag="VFM52_07820"
     CDS             complement(2319..3116)
                     /locus_tag="VFM52_07820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019463782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR family DNA-binding transcription
                     regulator"
                     /protein_id="HET8765113.1"
                     /translation="MTRRTPPAPTLPQERQQWILDRLRRDGRVVAAELAAEYAVTADS
                     LRRDLRELAAQGLCRRVYGGALPVSTGSAPLAERRAERLARKQALARKAVELVRAGQV
                     LLIDAGSTNAAIAAALPARQSLTVITNAPDVAAAVYEREGFEVLLLGGRLAPRIGGTV
                     GVQPLAELRQLHADLCFPGACAFDAATGLWGFDSDEVLLKRAMLAASTEAVVVVTSEK
                     LGIRATHRVAATSAVRHLVVEQATPRGVRAAFAAKGVEVLRAAAPGG"
     gene            complement(3184..4389)
                     /locus_tag="VFM52_07825"
     CDS             complement(3184..4389)
                     /locus_tag="VFM52_07825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007512913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HET8765114.1"
                     /translation="MRTILANLGWRVDALDVVETSVVATRDASVQPAVRATRWVFMVA
                     GIGIAAWAPMVPYAKARLGLDDGALGLVLLAFGGGSMVSMPLVGLLTHHFGSRRMIVA
                     GGMLACLALPLLALASSAAALAAALAYFGASFGALDVAMNAHAVEVERRAQRPLMSGF
                     HGMFSIGGLVGAAGISGLLAGGLPLPAAAALAAALLLALLWRQRTALLRGIAAAERHA
                     PFRLPHGVVWLLGVLCFISFLAEGSMLDWSALLLREVHGFGVAAAGTGYAVFSVAMAL
                     GRVTGDRVVARCGRVATVRSGACVAAGGFLLAAFAPWPAVVLAGFVLIGLGAANIVPV
                     MFGAAGRVPGMPPSIALAMVTTLGYLGLLSGPALIGFVAHVSGLALALAGVAILLMVT
                     AAAARVVRP"
     gene            4514..>4841
                     /locus_tag="VFM52_07830"
     CDS             4514..>4841
                     /locus_tag="VFM52_07830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007512912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I tRNA ligase family protein"
                     /protein_id="HET8765115.1"
                     /translation="MSRRLLVTNALPYANGPLHMGHLLGYIQADIWVRAQRMAGNEVV
                     YVCADDAHGTPIMLAAQKAGMTPEAFIEGIRAGHEADFADFGVHFDHYHSTHSEENRE
                     LATLIYT"
BASE COUNT          848 a         1780 c         1561 g          652 t
ORIGIN      
        1 cggactggaa aaacagcatc tgcgcaacgc cctcgttggc ggagatcttg gccggcagcg
       61 gcgtggtgtt ggaaaactcc agcgtcacgt ggccttccca ctccggttcc agcggggtga
      121 cgttgacgat gatgccgcag cgtgcgtagg tgctcttgcc gaggcatacc accagcacgt
      181 cacgcgggat gcggaaatac tccaccgtgc gcgccagcgc gaacgaattg ggcgggatga
      241 tgcacacatc cgacaccaca tcgacgaagc tcgccgggtc gaacgccttg gggtcgacga
      301 tggtggagtt gatgttggtg aagatcttga actcgcgggc gcaacgcacg tcgtagccgt
      361 agctcgacgt gccccacgac accgcgcgcc ggccgtcttc cagcgtcttg cactggccgg
      421 attcaaacgg ctcgatcatg cgctgcgatt cggccatgcg ccgaatccac ttgtcggatt
      481 tgatggtcac ttgcgctccg gggtcacgcg gcggcgcctt gcgccacggc gaaaggcgga
      541 aagttaccgg ttcgcggccg gcgcgtcgag cggcaagccg cgttcaggcc gcaccgggca
      601 caccgcgcac cacgatcttg ccgagcccca gcgacttgtt gcgcggcagg agcgacaacc
      661 gccctgcggt gttgcgcgcg atctcgcggt agcgtgcgga aagctcggaa tcggggatgg
      721 cgtccaccgt ggggttgccg ccgtcggtct gctcgcggat gcggatgtcg agcggcagcg
      781 aaccgagcag cggcaccttg tagcgttcgg ccatgcgctc gccgccaccc tcgccgaaga
      841 tgtgctcctc gtggccgcag ttcgagcaca cgtgggtggc catgttctcg acgatgccga
      901 gcaccgagac ttccaccttc tcgaacatct tgatcgcgcg gctgacgtcg atcagcgcga
      961 ggtcctgcgg cgtggtcacc accaccacgc ccgacaccgg caccttctgc gccagcgtga
     1021 gctggatgtc gccggtgccc ggcggcaggt cgatgatcat gtagtcgagc atgttccagc
     1081 gcgagtcggt gatcagctgc atcatcgcct gggtgaccat cgggccgcgc cagatcatcg
     1141 gcgtgtcttc ctcgacgagg aagccgatcg acatgatctg cacgccgtgc gcctcgagcg
     1201 gcacgatgct cttgccgtcc ggcgactccg gcttggcgtt gatgccgagc atgcgcggct
     1261 ggctcgggcc gtagatgtcg gcgtccatca cgccgacctt cgcgccctcg gccttcagcg
     1321 ccagcgcaag gttcgccgcc accgtggatt tgcccacgcc gcccttgccg gacgccacgg
     1381 caatgatgtt cttgacgttc ggcagcggcc ccagcgtgcc ctgcaccttg tgcgactgga
     1441 tgcgggtggt gaccgacacc gccgccgact cgatctcggc actggcttcc agcgcctgct
     1501 tcgcctgctg cgtgatcgcc tcgatcgcgc tggcggccgg gtagccgatc agcagatcca
     1561 ccgacacctt cgccccatcc acgcccaccg cacggatcgc attgccgagc ggcgcaccgg
     1621 tatggctgtc gatcaccgca ccgaggagtt ggcgcaccag ggcttcgttt acctgcgtca
     1681 tggcggatcg ggcttcactg caagactgga cacgtcatta tgccagcccg tgccgacgcg
     1741 ccgggtgatg cagatcagcg ggcatggcgc gacgcagctt gacgacgccc gtgcacgccg
     1801 gcacgctccg accataccgc cacgcacgga gtcccacgat gaagcccatc gcctgcctcg
     1861 cccttgcctt cggcctgctg ctcaccgcgg ggcccgtcct cgccgccaac gacaccccgg
     1921 ccggcacctg gaaaacgatc gacgacgcca cgcaccaggc caagtccatc gtcgagatca
     1981 gcgaacacga cggcgagtac caggcgaaga tcgtgaagct gttgaaccgt tcgccggcgg
     2041 acatccagcg cgacggcgaa gtcgcgctgt gccacgcctg cgacggcgcg cgcaaggaca
     2101 agccgatcga aggcatggtc atcatgtggg gcgtgcgcca ggacggcgac gcgtgggacg
     2161 gcggcaagat cctcgacccg aagaacggca agacctacaa ggtgaagctg tcgatgctgg
     2221 atggcgggcg gaagctcgac gtgcacggct acatcggctt cgcgctgctc ggccgcagcc
     2281 aggtgtggga acgccagtaa gccggggatc gcgcccgctc agccgcccgg cgcggcggca
     2341 cgcagcactt cgacaccctt ggccgcaaac gccgcgcgca caccgcgcgg cgttgcctgt
     2401 tcgacgacga gatgccgcac cgcgctggtt gcggcaacgc ggtgcgtcgc ccggatgccg
     2461 agcttctcgc tggtgacgac caccacggct tcggtgctgg ccgccagcat cgcgcgcttg
     2521 agcaacacct cgtcgctgtc gaatccccac agcccggtgg ccgcgtcgaa cgcgcaggcg
     2581 cccggaaagc acaggtcagc gtgcagctgc cgcaactccg ccagcggctg gacaccgacc
     2641 gtgccaccga tgcgcggcgc gagccgcccg cccagcagca acacctcgaa cccctcgcgc
     2701 tcgtacaccg ccgccgccac gtccggcgca ttggtgatga ccgtcagcga ttgacgcgcc
     2761 ggcagcgcgg cggcaatcgc cgcgttggtg gaaccggcgt cgatcagcaa cacctgcccc
     2821 gcgcgcacca gctccactgc cttgcgcgcc agcgcctgct tgcgtgccag ccgctcggca
     2881 cggcgttcgg cgagcggcgc ggacccggta gataccggca acgccccacc atacacgcgg
     2941 cggcacaggc cctgcgccgc cagctcgcgc aaatcacggc gcagggaatc cgcggtcacc
     3001 gcatattcgg ccgcaagctc ggcagccacc acccgaccgt cgcgacgcag gcgatcgagg
     3061 atccactgct gacgctcctg cggcagcgtc ggcgccggcg gcgtacgtcg cgtcatggcg
     3121 aatgcccagc gtggcggctg cggcccagcg tgccgccaat ggccgtaccg aacggcgctg
     3181 cgctcatggg cgcaccaccc gcgccgcggc cgccgtcacc atgagcagga tggcgacccc
     3241 ggccagtgcc agcgccaaac cgctgacgtg ggcgacgaag ccgatcagcg ccggcccgga
     3301 gagcagaccg aggtagccca gcgtggtgac catcgccaac gcgatgctgg gcggcatgcc
     3361 cggcacgcgg cccgcggcgc cgaacatcac cggcacgatg ttcgcggcgc cgaggccgat
     3421 cagcacgaaa ccggcgagca ccacggccgg ccacggcgcg aacgccgcca gcaggaagcc
     3481 gccggccgcc acgcaggcgc cagaccgcac cgtggccacg cggccgcaac gcgcgacgac
     3541 gcggtcgccg gtcacgcgac ccagcgccat cgccaccgag aacaccgcat atccggtgcc
     3601 ggccgccgcg acgccgaagc cgtgcacttc gcgcaacaac agcgcgctcc agtccagcat
     3661 cgagccttcg gcgagaaagc tgatgaaaca caacaccccg agcagccaaa cgaccccgtg
     3721 tggcaagcga aacggcgcgt ggcgttcggc cgccgcgatg ccacgcagca acgcagtgcg
     3781 ctgacgccac agcaacgcca gcagcaaggc cgcggccagc gccgccgcgg ccggcaacgg
     3841 caggccaccg gcaagcaagc cactgatgcc ggcggctccc accaggccgc cgatgctgaa
     3901 catgccgtgg aaccccgaca tcaagggtcg ttgcgcacgg cgctcgacct cgaccgcgtg
     3961 cgcgttcatc gcgacgtcca gcgcgccgaa gctcgcgcca aagtacgcca gcgccgcggc
     4021 cagcgccgcc gcactcgatg ccagcgccag cagcggcaac gcaaggcagg ccagcatgcc
     4081 gccggccacg atcatccggc ggctgccgaa gtggtgggtg agcagcccca ccagcggcat
     4141 cgacaccatc gaaccgccgc cgaaagccag cagcaccaga cccagcgcac cgtcgtccag
     4201 gcccagccgg gccttcgcgt acggcaccat gggcgcccac gccgcaatcc cgattccagc
     4261 caccatgaat acccagcgcg tcgcccgcac ggcaggctgc acgcttgcgt cgcgggtcgc
     4321 caccacactc gtttccacca cgtccaatgc atcgacccgc cagcccaggt tggcaaggat
     4381 tgtacgcaat cacgcattac cacgcacgaa cgcgtaacga gatcatcgtc gcgccggccc
     4441 cgcacaccag gctgcggcgg ggcgtgggaa tgcgcatggc ataatgccgg atcgttttca
     4501 accgccgagc accatgagcc gccgcctcct cgtcaccaac gccctgccct acgccaacgg
     4561 cccgctgcac atgggccacc tgctgggcta catccaggcc gacatctggg tgcgcgcgca
     4621 gcgcatggcc ggcaacgagg tggtgtacgt ctgcgcggac gacgcgcacg gcacgccgat
     4681 catgctcgcc gcgcagaagg ccggcatgac gccggaggcg ttcatcgagg gcatccgcgc
     4741 cgggcacgag gcggatttcg ccgacttcgg cgtgcacttc gaccactacc actcgacgca
     4801 ctcggaagaa aaccgcgagc tggcgacgct gatctacacg c
//
LOCUS       DASSVL010000445         2509 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_560966, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000445 DASSVL010000000
VERSION     DASSVL010000445.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2509)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2509)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2509
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_560966"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            48..722
                     /locus_tag="VFM52_07835"
     CDS             48..722
                     /locus_tag="VFM52_07835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019464141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family protein"
                     /protein_id="HET8765116.1"
                     /translation="MELFSSAWFSALLAIILIDLVLAGDNAIVIALAARRLPKSLQTK
                     AVFWGTFGAVGIRVLLTAVVIYLLKLPGLMLVGGLLLLPIAWKLLHQEEHTHDVAAAA
                     GFWSALRTIIVADALMGLDNVLAIAGASRGHLGLVVIGLLISVPLVVWGSTLILKLIE
                     RFPVIVYIGAGAIAVTAGRMFAHDQLLASVFTGREALRYMLDAVLVLGICGGGWLANR
                     RRARPR"
     gene            complement(776..1921)
                     /gene="prpC"
                     /locus_tag="VFM52_07840"
     CDS             complement(776..1921)
                     /gene="prpC"
                     /locus_tag="VFM52_07840"
                     /EC_number="2.3.3.16"
                     /EC_number="2.3.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017462489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050440 - 2-methylcitrate synthase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-methylcitrate synthase"
                     /protein_id="HET8765117.1"
                     /translation="MSEQVLPKAKKSVALSGVAAGNTALCTVGRSGNDLHYRGYDIHD
                     LAAKGCFEEVAYLLVHGHLPNWTELQNYKAKLKRLRGLPAPVKAALELLPAATHPMDV
                     MRTGCSVLGTVLPEKDDHNVTGARDIADRLMASFGSMLLYWYHFSHNGKRVETETDDD
                     SIAAHFLHVLHGRAPSELHANSLDKSLVLYAEHEFNASTFSARVIAGTGSDMYSAITG
                     AIGALRGPKHGGANEVAMEIISRYRTAADAEADIRARVERKEIIIGFGHPVYTVSDPR
                     NEIIKEISRKLCTDGGNPVLFDVSERIEKVMGEVKKMFPNLDWYSASTYHMLGVPTAM
                     FTPLFVISRTAGWSAHVIEQRQDGKIIRPSANYTGPEDLAYVPIDKR"
     gene            complement(2035..>2509)
                     /locus_tag="VFM52_07845"
     CDS             complement(2035..>2509)
                     /locus_tag="VFM52_07845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007509881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="isocitrate lyase/phosphoenolpyruvate mutase
                     family protein"
                     /protein_id="HET8765118.1"
                     /translation="VDRVKAAVDAKTDADFVVMARTDAAAKEGIDAAIERAVAYVEAG
                     ADMIFPEAMKTLDDYRKFKAAVKVPILANLTEFGSTPFFTTAELASANVDIALYCCGA
                     YRAMNKAALNFYETVRRDGTQKAVVGAMQTREELYDYLGYHAYEDKLDALFAQKG"
BASE COUNT          376 a          816 c          836 g          481 t
ORIGIN      
        1 ctcgtccccg gtaccgggtc cgtcccacga cctgacctgg agctcacatg gaattgttct
       61 cgtccgcctg gttctcggcg ctgctggcga tcatcctgat cgacctcgtg ctggccggcg
      121 acaacgccat cgtcatcgcg ctggccgcgc gccgcctgcc gaaatcgctg cagaccaagg
      181 cggtgttctg gggcaccttc ggcgccgtcg gcatacgcgt gctgctgacc gccgtggtga
      241 tctacctgct caagctgccg gggttgatgc tggtcggcgg cctgctcctg ctgccgatcg
      301 cctggaagct gctgcaccag gaggaacaca cccacgacgt ggcggccgcc gccgggttct
      361 ggtcggcgtt gcgcacgatc atcgtcgccg acgccctgat ggggctggac aacgtgctgg
      421 cgatcgccgg cgcctcgagg gggcacctcg ggctggtggt gatcggcctc ctgatcagcg
      481 tgccgctggt ggtgtggggt tccaccctga tcctcaagtt gatcgagcgc ttcccggtca
      541 tcgtctacat cggtgccggg gcgatcgcgg tcaccgccgg acgcatgttc gcgcacgatc
      601 agctgcttgc cagcgtgttc accggccgcg aagcgctgcg gtacatgctg gatgccgtgc
      661 tcgtcctcgg catctgcggc ggcggctggc tggccaaccg tcggcgcgcc cgtccccgct
      721 agaaacggga aaggcgccgc aagcggcgcc tttccgtacc ctgcacgcgg tgtgttcagc
      781 gcttgtcgat cggcacgtag gcgagatctt ccgggccagt gtagttcgcg ctcggacgga
      841 tgatcttgcc atcctggcgc tgctcgatca catgcgcact ccagccagcg gtacgcgaga
      901 tcacgaacag cggggtgaac atcgcggtcg gcacgccgag catgtggtag gtgctggcgg
      961 agtaccagtc gaggttcggg aacatcttct tgacctcgcc catcaccttc tcgatgcgct
     1021 cggaaacgtc gaacagcacc gggttgccgc catccgtgca cagcttgcgc gagatctcct
     1081 tgatgatctc gttgcgcgga tcggacaccg tgtacaccgg gtgaccgaag ccgatgatga
     1141 tttccttgcg ctcgacgcgg gcgcggatgt cggcctcggc atcggcggca gtgcggtagc
     1201 gcgagatgat ctccatcgcc acttcgttcg cgccgccatg cttggggccg cgcagcgcgc
     1261 cgatcgcgcc ggtgatcgcg gaatacatgt ccgagccggt gccggcgatc acgcgtgcgc
     1321 tgaacgtcga cgcgttgaac tcgtgctcgg cgtagagcac cagcgacttg tcgagcgagt
     1381 tggcatgcag ctcgctcggc gccctgccgt gcagcacgtg caggaaatgc gcggcgatgg
     1441 aatcgtcgtc ggtctcggtc tcgacgcgct tgccgttgtg actgaagtgg taccagtaca
     1501 gcagcatcga gccgaagctg gccatcaggc ggtcagcgat gtcgcgcgcg ccggtgacgt
     1561 tgtggtcgtc cttctcgggc agcacggtac cgagcaccga gcagccggtg cgcatcacgt
     1621 ccatcgggtg cgtcgcggcg ggcagcagtt ccagcgcggc cttgaccggt gccggcaagc
     1681 cgcgcaggcg cttcagcttg gccttgtagt tctgcagttc ggtccagttc ggcaagtgac
     1741 cgtgcacgag caggtaggcc acttcctcga agcagccctt ggccgcgagg tcgtggatgt
     1801 cgtagccgcg atagtgcaga tcattgccgc tgcggccgac cgtgcacaac gcggtgttgc
     1861 cggcggccac gccggacagc gcgacggatt tcttggcctt gggaagtact tgctcgctca
     1921 tcggaaatct ccagggagaa tgacgctttg gatctttgtc ggcaggagcc cgctcacggg
     1981 cgacccttcg aaaagcatcg cccgcgagcg ggctcctgca acaacatggg gcggtcagcc
     2041 tttttgcgcg aacagcgcat cgagcttgtc ctcgtaggcg tggtagccaa ggtagtcgta
     2101 cagctcctcg cgcgtttgca tcgcgccgac caccgccttc tgcgtgccgt cgcggcgcac
     2161 ggtttcgtag aaattgagcg ccgccttgtt catcgcgcga tacgcgccgc agcaatacag
     2221 ggcaatgtcc acgttggcgc tggccagctc cgcggtggtg aagaacggcg tggagccgaa
     2281 ttcggtgagg ttggcgagga tcggcacctt caccgcggcc ttgaacttgc ggtaatcgtc
     2341 cagcgtcttc atcgcctcgg ggaagatcat gtcggcaccg gcctcgacgt aggccacggc
     2401 gcgctcgatc gcggcatcga tgccctcctt ggctgccgcg tcggtgcgcg ccatgacgac
     2461 gaaatccgcg tcggtcttcg cgtccaccgc cgccttcacg cggtcgacc
//
LOCUS       DASSVL010000446         2490 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_787176, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000446 DASSVL010000000
VERSION     DASSVL010000446.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2490)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2490)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2490
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_787176"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..941)
                     /locus_tag="VFM52_07850"
     CDS             complement(<1..941)
                     /locus_tag="VFM52_07850"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HET8765119.1"
                     /translation="MATLELRGIHKHYGAAHAVDGIDLAVADGEFLAILGPSGCGKST
                     TMRMIAGLETPTRGQILIGGQDVTQLPPRARNVSMVFQSYALYPNMSVAKNIAFPLKA
                     RGVPRAEREQRVAKAAQTMGIVGLLERSPVRLSGGEKQKVALARALVRDPALYVFDEP
                     LSSLDAQVRAMARSELRQLHDRTKVTTVYVTHDQLEALGMGDRIAVMKAGRVRQVGTP
                     KELYGAPADTFVAGFLGSPPMNLIQAEGKIVGFRPEGIGVARAGTAVASDQFAVTARI
                     VELEFLGSTWQIYAVQGDGEAAQKFIAHVSPQVVTTL"
     gene            complement(1110..>2490)
                     /locus_tag="VFM52_07855"
     CDS             complement(1110..>2490)
                     /locus_tag="VFM52_07855"
                     /inference="COORDINATES: protein motif:HMM:NF024808.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HET8765120.1"
                     /translation="VALATSAMAAEQQPTPLQFPAKVGNLSFPATFPAGTTLTITQWS
                     HFVPSYDKWFDSYAAEWGKRNNVKVVVQHISLGDLVPTLSAAIAARSGSDLFEMVSPP
                     ASFIQGLQPLDDVNAAAEKAFGPQEAVCKTQSYLSVKNEWYGFCHGWVPDPGDYRVSL
                     WKQAGYPTGPHTYADLITGGEKIFQKTGIPVGVGMSPELDSEFFARSLIWSFGGRVFD
                     KCGDVALDSPQTVKAVQYQVDLFKKTETPQVFAWNPASNNQGFVSGQLSYIQNSISFY
                     RTAQASNKANADDTGFSPGLKGPTGEVHQTSHVWFIYVMPKYVRDPQRVLAAKKFMLD
                     LAANYSQASYASELYNFPAFPKTVPQLWAKGGWLDVDPFHSNPPNKLAVLRDASKWTA
                     WPGYPGDGNPAVSEVYNTHLLTTMMAQAARGVKTPAQAVKDTAGQIGTIVNKWKANGY
                     VGCPAAPAK"
BASE COUNT          345 a          863 c          854 g          428 t
ORIGIN      
        1 tcgagcgtgg tgacgacctg cggcgacacg tgcgcgataa atttctgcgc ggcctcgccg
       61 tcgccctgca ccgcgtagat ctgccaggtg gagccgagga actccagctc gacgatgcgc
      121 gcggtcaccg cgaactggtc gctggccacc gcggtgccgg cgcgggcgac gccgatgccc
      181 tcggggcgga agccgacgat cttgccctcg gcctggatca ggttcatcgg cgggctgccg
      241 aggaagccgg cgacgaaggt gtccgccggc gcgccgtaca gctccttcgg ggtgccgacc
      301 tggcgcacgc ggccggcctt catcaccgca atgcgatcgc ccatgcccag cgcttcgagc
      361 tggtcgtggg tgacgtacac cgtggtcacc ttggtgcggt cgtgcagctg gcgcagctcg
      421 ctgcgcgcca tcgcgcgcac ctgggcatcc agcgagctga gcggctcgtc gaacacgtac
      481 agcgcggggt cgcgcaccag cgcgcgcgcc agcgccacct tctgcttctc gccgccggag
      541 aggcgcaccg ggctgcgctc gagcaggccg acgatgccca tcgtctgcgc cgccttcgcc
      601 acccgctgct cgcgctcggc ccgcggcacg ccgcgcgcct tgagcgggaa cgcgatgttc
      661 ttcgccaccg acatgttcgg gtacagcgcg tagctctgga acaccatcga cacgttgcgc
      721 gcgcgtggcg gcaactgggt cacgtcctgg ccgccgatga ggatctgccc gcgggtcggc
      781 gtctccagcc cggcgatcat gcgcatcgtc gtgctcttgc cgcagccgga cgggccgagg
      841 atggcgagga actcgccgtc ggccaccgcg aggtcgatcc cgtccaccgc gtgggcggcg
      901 ccgtagtgct tgtggatgcc gcgtaattcc agggttgcca tcgaaacgct cccgatcaaa
      961 accgtgcacg ccgccgggcg acgcgcgcat ggcgcatcac ctcatccggt ttgcgtggcg
     1021 cgccggccag tgccgtgcgc gttcacccct ccgccgcttg cgtgccggca gcggagccgt
     1081 ccgtggcagg ccgctgccgg cgcgcgcgcc tatttcgccg gcgccgccgg gcagccgacg
     1141 tagccgtttg ccttccactt gttgacgatg gtgccgatct gcccggcggt gtccttcacc
     1201 gcctgcgcgg gcgttttcac cccgcgcgcg gcctgcgcca tcatcgtggt cagcaggtgc
     1261 gtgttgtaga cctcgctgac cgccgggttg ccgtcgcccg ggtagcccgg ccacgccgtc
     1321 cacttcgagg cgtcacgcag caccgcgagc ttgttcggcg ggttggaatg gaacgggtcg
     1381 acgtccagcc agccgccctt ggcccacagc tgcggcacgg tcttcgggaa tgccgggaag
     1441 ttgtacagct cgctggcgta gctggcctgg ctgtagttgg ccgccaggtc gagcatgaat
     1501 ttcttggcgg cgaggacgcg ctgcgggtcg cgcacgtact tcggcatcac gtagatgaac
     1561 cacacgtgcg aggtctggtg cacttcaccg gtcgggccct tgaggccggg gctgaacccg
     1621 gtgtcgtcgg cgttcgcctt gttcgacgcc tgcgccgtgc ggtagaacga gatcgagttc
     1681 tggatgtacg acagctggcc ggagacgaag ccctggttgt tcgatgccgg gttccaggcg
     1741 aacacctgcg gggtttcggt cttcttgaac aggtcgacct ggtactgcac cgccttcacc
     1801 gtctgcggcg aatccagcgc gacgtcgccg cacttgtcga acacccggcc gccgaacgac
     1861 cagatcagcg agcgggcgaa gaactccgag tcgagctcgg gcgacatgcc gacgccgacc
     1921 gggatgccgg tcttctggaa gatcttctcg ccgccggtga tgagatcggc gtaggtgtgc
     1981 ggcccggtcg ggtagccggc ctgcttccac agcgagacgc gatagtcacc ggggtcgggc
     2041 acccagccgt ggcagaagcc gtaccactcg ttcttcaccg acaggtagga ctgcgtcttg
     2101 cacaccgcct cctgggggcc gaaggctttt tccgccgccg cgttcacgtc gtccagcggc
     2161 tgcaggccct ggatgaagga tgccggcggc gacaccatct cgaacaggtc cgagccgctg
     2221 cgcgccgcga tcgccgcgga cagcgtcggc accaggtcgc ccaggctgat gtgctgcacc
     2281 accaccttga cgttgttgcg cttgccccac tctgccgcgt agctgtcgaa ccacttgtcg
     2341 tagctcggca cgaagtggct ccactgggtg atggtgagcg tggtgccggc cgggaacgtc
     2401 gccgggaaac tcaggttgcc gacctttgcc gggaactgca gcggcgtggg ttgctgctcc
     2461 gccgccatcg ccgatgttgc cagcgccacc
//
LOCUS       DASSVL010000447         2842 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1324381,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000447 DASSVL010000000
VERSION     DASSVL010000447.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2842)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2842)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2842
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1324381"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            1..779
                     /locus_tag="VFM52_07860"
                     /pseudo
     CDS             1..779
                     /locus_tag="VFM52_07860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015448944.1"
                     /note="internal stop; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
     gene            complement(850..1677)
                     /locus_tag="VFM52_07865"
     CDS             complement(850..1677)
                     /locus_tag="VFM52_07865"
                     /inference="COORDINATES: protein motif:HMM:NF004826.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oxidoreductase"
                     /protein_id="HET8765121.1"
                     /translation="MNKIALVTGASSGIGEATVRRLVADGHLVYAAARRVERMQPLAA
                     LGVRILPLDLCDDASIARAVDTIRSEQGRLDALVNNAGYGSYGALEDVPLDEARRQFE
                     VNVFGLARLAQLALPMMRAQGSGRIVNVTSIGGKMHEPLGSWYHATKFAVEGLSDCLR
                     MELAPFGIDVVVIEPGSIHTEWGGIARESLLQRSAHTAYAAQATAHARMLTRGGQPPL
                     ASQPDVVAMTIAKALRTRRPRTRYATGGGARSILMLRRLLSDRGFDALMRFAEKRLG"
     gene            1749..2177
                     /locus_tag="VFM52_07870"
     CDS             1749..2177
                     /locus_tag="VFM52_07870"
                     /inference="COORDINATES: protein motif:HMM:NF024803.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HET8765122.1"
                     /translation="MLIAEFRRRTGLTRDAVRLYVELGLLKPVVDPGNGYQRFAEMDV
                     ERAGMIRMARELGFSLKQMVPLAREYEAGRLNVKQQLAVMRRQQAMIEAQAARVAAMR
                     DYVSAKIAWLEGGAHGDAPAFAACAPGLADAPVVARAAVG"
     gene            complement(2228..2467)
                     /locus_tag="VFM52_07875"
     CDS             complement(2228..2467)
                     /locus_tag="VFM52_07875"
                     /inference="COORDINATES: protein motif:HMM:NF012675.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015036 - disulfide oxidoreductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin family protein"
                     /protein_id="HET8765123.1"
                     /translation="MHVTVYAKANCPQCTQTRREMDSLGIAYAVVDLERDSAQRSRLI
                     AAGYRTAPVVESDAGAWSGYQPERIRGLIAAAVAG"
     gene            complement(2494..>2842)
                     /locus_tag="VFM52_07880"
     CDS             complement(2494..>2842)
                     /locus_tag="VFM52_07880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8765124.1"
                     /translation="AFDRTKTRIVQLIDEVTASELAWTDYAFSEGRELTGVTRRMMKD
                     WVRYSATDVARFFGLADRVGFAPVDANPLKYMENWLDMSKIQASNQEEDTAQYKVGVM
                     RRDDENAVFAVDF"
BASE COUNT          470 a          951 c          983 g          438 t
ORIGIN      
        1 cgctgtatgg cctgatgttc aagcccaccc acttcgaccc ggcgaagaag tagccggtca
       61 tcgactacgt gtatccgggc ccgcagaccg gctcggtgcg cggacgcagc ttcctgccgt
      121 cgcgcggcga caaccaggcg ctggccgaac tgggcttcat cgtggtcgcg ctcgacggca
      181 tgggcacgcc gtggcgcagc gccagcttcc accacacctg gtacggcgac atgggcgaca
      241 acacgctgcc cgaccaggtg gccggcatca aggagctggc gcagcgctat tcgtggatcg
      301 acctcgaccg cgtcggcatc tggggccact ccggcggcgg caacaccacc gccgatgcca
      361 tgttccgcta ccccgacttc ttcaaggtcg gctgggccga gagcggcaac cacgacaacc
      421 gcgtctacga gaacgactgg ggcgagaagt accagggcct gctggtgacc aacaaggacg
      481 gcaccaccag ctacgacaac caggccaacc aggacctggc gaagcacctc aagggccacc
      541 tgatgctggt gcacggcacc atcgacgaca acgtgccgat cgagagcacc tatctcgtcg
      601 cccaggcgct gatcaaggcc aacaaggact tcgacatgct gatcatcccc aacgtccacc
      661 acggctatgc ggcctccacc ccgtatgcca cgcgccggcg ctgggactac ttcgtgcaat
      721 acctcgccgg caacacgccg ccgaaggaat acggactgaa ggcatggccg tggttctgag
      781 cacggcagct ggatgaaacg acgaaggccg gagtggggag ctccggcctt cctcttttga
      841 ttccatccct cagccgagcc gcttctccgc gaaacgcatg agcgcgtcga aaccgcggtc
      901 gctgagcagg cggcgcagca tgaggatgct gcgtgcaccg ccgccggtcg cgtagcgggt
      961 gcgcgggcgg cgcgtacgca gggccttggc gatggtcatg gcgacgacgt ccggttgcga
     1021 agccagcggc ggctggccgc cgcgcgtcag catccgtgca tgcgcagtgg cctgggcagc
     1081 ataggcggtg tgcgcggagc gctgcagcag gctttcccgg gcaatgccgc cccattcggt
     1141 gtggatcgag ccgggctcga ttaccaccac gtcgatgccg aacggcgcca gctccatgcg
     1201 caggcaatcg ctcaggcctt ccaccgcgaa cttggtggcg tggtaccagc tgcccagcgg
     1261 ttcgtgcatc ttgccgccga tggaagtgac gttgacgatg cggccgctgc cctgcgcgcg
     1321 catcatcggc aacgccagct gggccagccg cgcgaggccg aacacgttca cctcgaactg
     1381 gcggcgcgcc tcgtccagcg gcacgtcttc cagcgcgccg taggagccgt agccggcgtt
     1441 gttgaccagc gcatcgaggc gcccctgttc gctgcggatc gtgtcgacgg cccgcgcgat
     1501 ggaggcgtcg tcgcacaggt cgagcggcag gatgcgcacg cccagcgcgg ccagcggctg
     1561 catgcgctcg acgcgccgcg cggcggcgta gacgagatgg ccgtcggcca ccagccggcg
     1621 gacggtggct tcgccgatgc cggaggaggc gccggtgacc agcgcaatct tgttcatgcg
     1681 ggtgaccatg tggaagggat gccgcgagtc tagacttggg gccaaggccc caggtcaaga
     1741 ggtgtcgcat gctgatcgcc gaattccgcc gccgcaccgg cctgacccgc gacgcggtgc
     1801 gcctgtacgt ggaactgggc ctgctcaagc cggtggtcga tcccggcaac ggctaccaac
     1861 gcttcgccga gatggacgtc gagcgcgccg ggatgatccg catggcgcgc gaactgggct
     1921 tcagcctgaa gcagatggtg ccgctggcgc gcgagtacga ggccgggcgg ctgaacgtga
     1981 agcagcagct ggcagtgatg cgtcggcaac aggcgatgat cgaagcgcaa gccgcgcggg
     2041 tggcggcaat gcgtgattac gtgagcgcga agatcgcctg gctggaaggc ggcgcgcatg
     2101 gcgacgcgcc ggcgtttgcg gcgtgcgccc ccggtctggc cgacgcgccg gtagtggcgc
     2161 gcgcggccgt cggctgagaa gcaccgcccc gccttcggcc gaaccgcacc ggtcgccggg
     2221 gccgcaatca gcccgcgacg gcggccgcaa tcagcccgcg gatgcgttcc ggctgatagc
     2281 ccgaccacgc gccggcgtcg ctttcgacga ccggcgcggt gcgatagccg gcggcaatca
     2341 ggcggctgcg ctgtgcgctg tcgcgctcca ggtcgaccac ggcgtaggcg atgccgaggc
     2401 tgtccatttc gcgcctggtc tgcgtgcact gcggacaatt ggccttggcg tagacggtga
     2461 catgcatggc gggctccttg ggtgcgggcg gggtcagaaa tccacggcga agacggcgtt
     2521 ctcgtcgtca cggcgcatca cgccgacctt gtattgcgcg gtgtcttcct cctggttgga
     2581 ggcctggatc ttgctcatgt cgagccagtt ctccatgtac ttgagcgggt tcgcatcgac
     2641 cggcgcgaag cccacgcggt cggcgagacc gaagaaacgc gcgacgtcgg tggcgctgta
     2701 gcgcacccag tccttcatca tccggcgggt gacgccggtg agctcgcggc cttcggaaaa
     2761 cgcgtagtcg gtccacgcca gctcgctcgc ggtcacctcg tcgatgagct gcacgatgcg
     2821 tgtcttggtt ctatcgaagg cc
//
LOCUS       DASSVL010000448         2438 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_38608, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000448 DASSVL010000000
VERSION     DASSVL010000448.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2438)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2438)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2438
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_38608"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1276)
                     /locus_tag="VFM52_07885"
     CDS             complement(<1..1276)
                     /locus_tag="VFM52_07885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008437564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0006814 - sodium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:proton antiporter"
                     /protein_id="HET8765125.1"
                     /translation="MAIGPGLMLAGMLAVGFACQWLAWRVKLPAIVFLLLAGLLLGPV
                     TGVLDPDRLLGTLLFPLVSLAVALILFEGSLTLRFAELRGIGSAVRGLVSYVALTALG
                     LLALAAHFVADVAWPIALLFGALTCVTGTTVIGPMLRTLRPNAKIANTLRWEGIVIDP
                     LGALFAVLIYEAIVSHQQGHTVGVFLATVASGAVVGGVAAWLLGSALRRGLIPEYLQN
                     YGTLATVLLAFVAANTLAHESGLLTVTIMGIALGNLRGVHIDDILDFKENLTTLLVSL
                     LFILLAARLPWPLPGRLLWEGVAIFAIAQFAIRPLTVALASLRSGLDWRERALIGWVA
                     PRGIVAASVSALFALRLQSLAVPGADALVPLVFLIIIGTVILQSATARPLARWLGVAE
                     PEPRGVLVYGADPVAREIGKALHDAGVRVVLAD"
     gene            complement(1338..>2438)
                     /locus_tag="VFM52_07890"
     CDS             complement(1338..>2438)
                     /locus_tag="VFM52_07890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005989245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YifB family Mg chelatase-like AAA ATPase"
                     /protein_id="HET8765126.1"
                     /translation="RRVVVPRANAAEAALVSEVDVRVADTLAEVCGWLHGTQELPPPT
                     AAVADGGAFEGPDLRDVRGQLKARRALEIAAVGGHHLLLIGPPGTGKTMLAERLPGIL
                     PPLTESEALETCAVLSIAGQVTDPARWRRRPFRAPHHTASAVALVGGGSQPRPGEISL
                     AHNGVLFLDELPEFSRHVLEVLREPLESGHIVVSRAARQCLFPAQFQLVAAMNPCPCG
                     HAGDPHRPCICTPDQVRRYRARISGPLLDRIDLAVEVPPLPLAEMDAARSARDEDSAT
                     VRARVVAARRHALLRAGRPNAEINHRELERDCALGPAERRWYEQALERLGMSARAYHR
                     VLRVARSIADLDGGAATLEKEHLAEALQYRRG"
BASE COUNT          384 a          881 c          890 g          283 t
ORIGIN      
        1 cgtcggccag caccacgcgc acgccggcgt cgtgcagcgc cttgccgatt tcgcgggcaa
       61 ccggatccgc gccatacacc agcacgccgc gcggctccgg ctcggcgacg ccaagccagc
      121 gcgccagtgg ccgcgcggtc gcgctctgca ggatcacggt gccgatgatg atgaggaaca
      181 ccagcggcac cagcgcgtcg gcgccgggca ccgccaggct ctgcaggcgc agcgcgaaca
      241 gcgcggagac cgaggcggcg acgatgccgc gcggcgcgac ccagccgatc agcgcgcgct
      301 cgcgccagtc cagcccactg cgcaggctgg cgagggcgac ggtgagcggg cggatcgcga
      361 actgcgcgat ggcgaaaatc gccacgcctt cccacaacag gcgtcccggc agcggccatg
      421 gcaggcgcgc ggcgagcagg atgaacaaca gcgacaccag cagcgtggtg aggttttcct
      481 tgaaatcgag gatgtcgtcg atgtgcacgc cgcgcaggtt ccccagcgcg atacccatga
      541 tcgtcaccgt cagcagcccg gattcgtggg ccagcgtgtt ggcggcgacg aatgccagca
      601 gcacggtggc gagcgtgccg tagttctgca ggtactcggg aatcagcccg cgccgcagcg
      661 cgctgccgag cagccacgcg gcgacgccgc ccaccacggc gccgctggcg acggtggcca
      721 ggaacacgcc gaccgtgtgg ccttgctggt gcgagacgat ggcctcgtag atcagcaccg
      781 cgaacagcgc gccgagcggg tcgatgacga tgccttccca gcgcagggtg ttggcgatct
      841 tcgcgttcgg ccgcagcgtg cgcagcatcg gcccgatcac ggtcgtgccg gtgacgcagg
      901 tcagcgcgcc gaacagcagc gcgatcggcc atgccacgtc ggcgacgaag tgcgccgcca
      961 gcgcgagcag cccgagtgcg gtcagggcga cgtagctcac cagcccgcgc accgcgctgc
     1021 cgatgccgcg cagctcggca aagcgcaggg tcaggctgcc ctcgaacagg atcagcgcca
     1081 ccgccagcga caccagcgga aacagcagcg tgccgagcag ccgatccgga tcgagcacgc
     1141 cggtgaccgg gccgagcagc aggcccgcca gcagcaggaa cacgatcgcg ggcaacttca
     1201 cccgccacgc cagccactgg cacgcaaaac caaccgccag catgccggcc aacatcagac
     1261 ctgggccaat tgccatcagg ggttccgtcg ttcgtcgacc gggtatcgga acacgcgcag
     1321 ccgcgtgcgt ccagcggtca gccgcggcgg tactgcagcg cctcggccag gtgctctttt
     1381 tccagcgtgg ccgcgccgcc gtcgaggtcg gcgatcgagc gcgcgacgcg cagcacgcgg
     1441 tgataggcgc gcgcggacat gccgaggcgt tccagcgcct gctcgtacca gcggcgctcg
     1501 gccggaccga gcgcgcagtc gcgttcgagc tcgcggtggt tgatctcggc gttcggccgg
     1561 ccggcgcgca gcagcgcatg ccgacgcgcg gcgaccacgc gtgcgcgcac ggtggcggaa
     1621 tcctcgtcgc gggcgctgcg cgcggcgtcc atctcggcca gcggcagcgg cggcacctcg
     1681 acggcgaggt cgatgcggtc cagcagcggg cccgagatgc gcgcacggta gcggcgcacc
     1741 tggtcgggtg tgcagatgca tggccgatgc gggtcgccgg cgtggccgca cgggcacggg
     1801 ttcatcgcgg ccaccagctg gaactgggcg ggaaacaggc attgccgcgc ggcgcgcgag
     1861 accacgatgt ggccggattc gagcggctcg cgcagcacct cgagcacgtg ccggctgaac
     1921 tcgggcagct cgtccaggaa cagcacgccg ttgtgcgcga gcgagatttc gccggggcgc
     1981 ggctgcgagc cgccgccgac cagcgccacc gccgaggccg tgtggtgcgg cgcgcggaac
     2041 gggcgccggc gccagcgcgc ggggtcggtc acctggccgg cgatcgacag cacggcgcag
     2101 gtttccagcg cctccgattc ggtcagcggc ggcaggatgc cgggcaggcg ttccgccagc
     2161 atggtcttgc cggtgccggg cgggccgatc agcagcaggt gatggccgcc gacggcagcg
     2221 atctccagcg cgcgacgcgc cttgagctgg ccgcgcacgt cgcgcagatc gggcccctcg
     2281 aacgcgccgc catccgccac ggcggcggtg ggcggcggca gttcctgcgt gccgtgcaac
     2341 cagccacaga cctcggccag cgtgtccgcc acgcgcacgt ccacctcgga caccagtgcc
     2401 gcctcggccg cgttcgcgcg cggcaccacc acgcggcg
//
LOCUS       DASSVL010000449         3972 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1408256,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000449 DASSVL010000000
VERSION     DASSVL010000449.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3972)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3972)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3972
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1408256"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..668)
                     /locus_tag="VFM52_07895"
     CDS             complement(<1..668)
                     /locus_tag="VFM52_07895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008433791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HET8765127.1"
                     /translation="MTDSIASTPGVLIVGGGLVGASLAIALDAAGVAATMVEATAPHI
                     GTPPSYDERNLALARATVNGLTAIGVWPHAAAQATPIRHIRVSRAGEFGSARMEAAKE
                     GVDALGWTLPARELGAALLRRLDACTRLTRIAPGKLEALDAHADGWRARIRTPEGERT
                     VDAALLVGADGTESFVRQTLGIDARRFDYEQTLFVATVTPERAHGNRAFERFSDHGPV
                     ALLPL"
     gene            762..1361
                     /locus_tag="VFM52_07900"
     CDS             762..1361
                     /locus_tag="VFM52_07900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007509292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8765128.1"
                     /translation="MTTSTTRRLAIFLGLAAVMGVTRIHLSLLDHALWDASWGVFFLA
                     GFWLRGQVRWALPLLLAEAVLVDYLVITGQGIDFWSAYCVSPAYWFLAPAYSALWAGG
                     SWLAKRQRGLNLNTLALAVGALLVAEGACYLISNGSYYWLAATVPGPRSVGAWFANLG
                     DWYAPFLIGTAAYVALGGVLHALATQLARSTQRDGQTQR"
     gene            1371..1949
                     /locus_tag="VFM52_07905"
     CDS             1371..1949
                     /locus_tag="VFM52_07905"
                     /EC_number="2.5.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017460200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008817 - corrinoid adenosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cob(I)yrinic acid a,c-diamide
                     adenosyltransferase"
                     /protein_id="HET8765129.1"
                     /translation="MGNRVSKVYTRTGDNGTTGLGDGTRVPKDSSRVNAYGTVDELNC
                     TLGIVLACEGVSAEIREILTQIQHELFDLGGELCIPGMVTVQDADVTKLETILDHFND
                     KLPPLKEFILPGGGLAAAHCHLARTVCRRAERAVITLRREEPDTRLQPQHYLNRLSDL
                     LFVLCRVLARDSGHGEVLWHHERRPRPKPAAG"
     gene            1960..2877
                     /locus_tag="VFM52_07910"
     CDS             1960..2877
                     /locus_tag="VFM52_07910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019464319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histone deacetylase family protein"
                     /protein_id="HET8765130.1"
                     /translation="MRLYTHPACLSHITGPDHPESPARLAAVLRALDRDRFAMIDRVE
                     APRATREQLLRVHTAAHVERMLAPIEPGHTHYLDEDTALSPGTAEAALRAAGANVAAV
                     DAVLGGHVRHAFCAVRPPGHHATRDAAMGFCLFNNVAVGAAHALAAFRLKRVAIVDFD
                     VHHGNGTQDIFWREPRVLYASSHQMPLYPGSGEPAERGAGNIINRPLSAGDGPYIFRE
                     LWEGDLLPRLRAFKPQLVMVSAGFDAHESDPLADLCLGSEDYAWITAKLVELADHCAG
                     GRLVSTLEGGYDLKALAACTAAHVEVLMD"
     gene            complement(2879..3286)
                     /gene="msrB"
                     /locus_tag="VFM52_07915"
     CDS             complement(2879..3286)
                     /gene="msrB"
                     /locus_tag="VFM52_07915"
                     /EC_number="1.8.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018974371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033743 - peptide-methionine (R)-S-oxide
                     reductase activity [Evidence IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (R)-S-oxide reductase MsrB"
                     /protein_id="HET8765131.1"
                     /translation="MSEASQTKTDAEWRAQLGDDRYAVCRLAATEAPFSGKWYRHHEP
                     GTYVCTACGNPLFGSAAKFDSPCGWPSYFQPLAPDAVTDHADASHGMQRTEVRCARCG
                     SHLGHVFPDGPRPTGLRYCINSLALDFVPADGQ"
     gene            3370..>3972
                     /locus_tag="VFM52_07920"
     CDS             3370..>3972
                     /locus_tag="VFM52_07920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007509297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS-assembly protein LptD"
                     /protein_id="HET8765132.1"
                     /translation="MTRSFPRRRLLAVAAALALVGGQADAAGSSLKQHPKTSLDGSEQ
                     VCPLGSFHCAPRPYNYAMCRPNAMLSFYDPTLSRDSSVRDTSRTFVTAQHVDSSNQSV
                     YHLEGNARINRADQQLTADTIDYNNDTSDYDARGEVHYQDAGQLLSSNHVRGNNDAST
                     GIASDVQYQMLDSRGNGSASQAQMFDADRTRYSQASYSTCD"
BASE COUNT          592 a         1471 c         1324 g          585 t
ORIGIN      
        1 agcggcagca gcgccaccgg accgtgatcg gagaaccgct cgaacgcgcg gttaccgtgc
       61 gcgcgttccg gggtgacggt ggcgacgaac aaggtctgct cgtagtcgaa gcgccgcgca
      121 tcgatgccca gtgtttggcg cacgaacgac tcggtgccgt cggcgccgac cagcagcgcc
      181 gcgtccaccg tgcgctcgcc ctccggcgtg cggatgcgcg cgcgccagcc atcggcgtgc
      241 gcatcgagcg cttcgagctt gcccggcgcg atccgcgtca gccgcgtgca ggcgtcgagc
      301 cggcgcagca gcgcggcgcc cagctcgcgc gccggcagcg tccagcccag cgcgtcgacg
      361 ccttccttcg ccgcctccat gcgtgcgctg ccgaactcgc cggcgcggct gacgcggatg
      421 tggcggatcg gcgtggcctg ggccgcggca tgcggccaca caccaatcgc ggtcaggcca
      481 ttgacggtgg cccgcgccag cgccaggttg cgctcgtcgt agctgggcgg cgtgccgatg
      541 tgcggcgcgg tggcctcgac catggtcgcg gcgacgccgg cggcgtccag cgcaatggcc
      601 aggctggcgc cgaccaggcc gccgccgacg atcagcacgc ccggcgtgga agcaatcgaa
      661 tcagtcatgc ggcggatgat acgcgggccc gcgcccgcac caccgcaatg ggttgcgcta
      721 gactcgcaaa cctgcaaacg ctgcacgaca cggagttccg catgaccacc tcgacgaccc
      781 ggcgcctcgc catcttcctc ggcctggccg cggtgatggg cgtcacccgc atccaccttt
      841 cgctgctcga ccatgccttg tgggatgcgt cgtggggcgt gttcttcctt gccggtttct
      901 ggctgcgcgg acaggtgcgc tgggcgctgc cgctgctgct ggcggaagcg gtgctggtcg
      961 actacctggt catcaccggc cagggcatcg atttctggag cgcgtactgc gtgtcgccgg
     1021 cgtactggtt cctcgcccct gcctacagcg cgctgtgggc cggcggcagc tggctggcga
     1081 agcgccagcg cgggctcaac ctcaacaccc tggcgctggc cgtcggcgcg ctgctggtgg
     1141 ccgagggcgc gtgctacctg atctcgaacg gcagctacta ctggctcgcc gcgacggtac
     1201 ccggcccgcg cagcgtcggc gcgtggttcg cgaacctcgg cgactggtac gccccgttcc
     1261 ttatcggcac tgcggcctac gtcgctctcg gcggcgtgct gcatgcgctg gcgacccagc
     1321 ttgcgcgcag cacgcagcgc gacggccaga cgcaacgctg agccggctcc atgggcaacc
     1381 gggtttccaa ggtctacacc cgcaccggcg ataacggcac gacgggcctg ggcgatggca
     1441 cccgggtgcc gaaggattcc tcgcgggtca acgcctacgg cacggtggac gagctgaact
     1501 gcacgctcgg catcgtgctc gcgtgcgagg gcgtcagcgc cgagatccgc gaaatcctca
     1561 cccagatcca gcacgagctg ttcgacctgg gcggcgagct gtgcatcccc ggcatggtca
     1621 cggtgcagga cgccgacgtg acgaagctgg aaaccatcct cgaccacttc aacgacaagc
     1681 tgccgccgct caaggagttc atcctgcccg gcggcgggtt ggcggccgcg cactgccacc
     1741 tggcgcgcac ggtgtgccgc cgcgccgagc gcgcggtcat caccctgcgc cgggaagaac
     1801 ccgacacccg cctgcagccg cagcactacc tgaaccggct gtccgacctg ctgttcgtgc
     1861 tgtgccgcgt gctggcgcgc gacagcggcc acggcgaggt gctgtggcac cacgagcgac
     1921 gcccgcgtcc caagcctgcc gcgggctgac cgcggcatgc tgcggctgta cacgcacccc
     1981 gcctgcctca gccacatcac cggccccgac cacccggagt cccccgcacg cctcgctgcc
     2041 gtgctgcgcg cgctcgatcg cgaccgcttc gcgatgatcg accgcgtcga ggcgccgcgc
     2101 gccacgcgcg agcagctcct gcgcgtgcac accgccgccc acgtcgagcg catgctggca
     2161 ccgatcgagc ccggccacac gcactacctg gacgaggaca ccgcgctgtc gccgggtacc
     2221 gccgaagcgg cgctgcgcgc ggccggggcg aacgtggccg ccgtcgacgc ggtgctcggc
     2281 gggcacgtgc ggcatgcgtt ctgcgccgtg cgcccgcccg gccaccacgc cacgcgcgat
     2341 gcggcgatgg gattctgcct gttcaacaac gtcgccgtcg gcgcggcgca cgcgctcgcg
     2401 gcatttcggc tgaagcgcgt ggcgatcgtg gatttcgacg tgcaccacgg caatggcacc
     2461 caggacatct tctggcgcga gccgcgcgtg ctctacgcgt ccagccacca gatgccgctc
     2521 taccccggca gcggtgaacc ggccgagcgc ggcgccggca acatcatcaa ccgaccgctg
     2581 tcggccggcg acggcccgta catcttccgc gagctgtggg aaggcgatct gctgccgcgc
     2641 ctgcgcgcgt tcaagccgca gctggtgatg gtttccgccg gcttcgacgc ccacgagagc
     2701 gacccgctcg ccgacctttg cctcggcagc gaggactacg cgtggatcac cgccaagctg
     2761 gtcgagctgg ccgaccactg cgccggcggc cgcctggtgt cgacgctcga aggcggttac
     2821 gacctcaagg cgctggccgc ctgcaccgcg gcgcacgtcg aagtgctgat ggactgaatc
     2881 actggccgtc ggccggcacg aaatccagcg ccagcgaatt gatgcagtag cgcagcccgg
     2941 tcggccgcgg gccatcggga aacacgtggc ccaggtgcga gccgcacctg gcgcaacgca
     3001 cctcggtgcg ctgcatgccg tggctggcgt cggcatgatc ggtcaccgca tccggcgcca
     3061 gcggctggaa atagctcggc cagccacacg gcgagtcgaa cttggccgcc gaaccgaaca
     3121 gcgggttgcc gcacgccgtg cacacgtagg tgccgggttc gtggtggcga taccacttgc
     3181 cgctgaacgg cgcttcggtg gccgccagcc ggcacaccgc atagcggtcg tcgccaagct
     3241 gcgcgcgcca ttcggcgtcg gtcttggtct ggcttgcttc gctcatgact gaaccctcat
     3301 cgtgtcgtgc atgtctgggg cagggccttt ctgctagctt tacgggcctc gctccgctgg
     3361 acttccattg tgacgcgctc gttccctcgc cgccgcctgc tggccgttgc ggccgctctc
     3421 gccttggtcg gcggccaggc cgacgcggcc ggcagcagtc tcaaacagca tcccaaaacc
     3481 tcgctcgacg gcagcgaaca ggtgtgcccg ctcggctcgt tccactgcgc gccgcgcccg
     3541 tacaactacg cgatgtgccg gccgaacgcg atgctttcgt tctacgaccc cacgctgagc
     3601 cgcgacagca gcgtgcgcga caccagccgg accttcgtca ccgcgcagca cgtcgacagc
     3661 tcgaaccaga gcgtctacca cctcgaaggc aatgcgcgga tcaaccgcgc cgaccagcag
     3721 ctcaccgccg acaccatcga ctacaacaac gacaccagcg actacgacgc ccgcggcgag
     3781 gtgcactacc aggatgccgg gcagctgttg tcgtcgaacc acgtgcgcgg caacaacgac
     3841 gcctcgaccg gcatcgccag cgatgtgcaa taccagatgc tcgactcgcg cggcaacggt
     3901 tccgccagcc aggcgcagat gttcgacgcc gaccgcacgc gctactcgca ggccagctat
     3961 tccacctgcg ac
//
LOCUS       DASSVL010000450         2918 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_914177, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000450 DASSVL010000000
VERSION     DASSVL010000450.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2918)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2918)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2918
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_914177"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..887
                     /locus_tag="VFM52_07925"
     CDS             <1..887
                     /locus_tag="VFM52_07925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017463418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="SLC13 family permease"
                     /protein_id="HET8765133.1"
                     /translation="MSQLGELFNPTRAGISEVVIPPVSRFVKHRIAELRLRKRFGISV
                     LAITRGDQVFRDDVRGVSLRAGDTVVLHSNWRDLALAAEDKDLVVVTDIPKEEQRPGK
                     IWQAVGFFLMAQGLALFTPLDLSLSMMAGAIAMLLTGVLNMDEAYKAINWKTIFVVAC
                     LIPLGWSMDATGTAAWLAQLVLTHLGGVAPWVLQLCVALLTLLFAQVMSNVGATVMMV
                     PVAISVAVATGANPAAYALIVAVSSSNTFLISAGHPALMMVTGPGGYKGKDFLRVGAP
                     LTVLMLVATLLMVNLMFR"
     gene            complement(916..1287)
                     /locus_tag="VFM52_07930"
     CDS             complement(916..1287)
                     /locus_tag="VFM52_07930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017463419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rieske 2Fe-2S domain-containing protein"
                     /protein_id="HET8765134.1"
                     /translation="MDTVNETGSSQAHAVCALEQVPDGGATAVDAMLADGEESLILLR
                     RGEQVNGYLNICPHAGNRLDYAPGKFLLKNDSLICAVHGAVFNQADGLCTGGPCRGQS
                     LRAVPLRVVDGFICLDPAALP"
     gene            1386..1643
                     /locus_tag="VFM52_07935"
     CDS             1386..1643
                     /locus_tag="VFM52_07935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007807171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8765135.1"
                     /translation="MRRPRHPLARFLSLLLGLAVIGVLLVFGLVVAGVLLIGGVIVLA
                     IRQWKQAQAPAGVPTQGPAKPQPAVLEGEFRVIRQGRPVTH"
     gene            1707..2630
                     /gene="yedA"
                     /locus_tag="VFM52_07940"
     CDS             1707..2630
                     /gene="yedA"
                     /locus_tag="VFM52_07940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007509449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="drug/metabolite exporter YedA"
                     /protein_id="HET8765136.1"
                     /translation="MSEIPASLAADAPRRLTDPRVLIPLGLFALYVIWGSTYLGIRFA
                     LESYPPFLLAGVRFLGAGIALYGFLRWRGMAPPTPLQWRNAAITGLLLLGMGNGLVCF
                     AEERVSSGIAAVAVASMPLFAALFSGMYGEWPHRRESIGLAIGFAGVIVLNLGSSLAG
                     SSLGAAALLLAAAAWAFGSVWSRRQTMPPGPMNTAAQMLCASLALLVVGFASGEHLPA
                     HPSTRATLALVYLAVFGSIIAFSAYLYVLKHARPALATSYAYVNPPVAVLFGVLLAGE
                     HVGPFDLAGMAIILAGVAVITLARTRRVAKP"
BASE COUNT          378 a          998 c         1028 g          514 t
ORIGIN      
        1 gcatgagcca gctcggcgag ctgttcaacc ccacccgcgc gggcatttcc gaggtggtga
       61 tcccgccggt gtcgcgcttc gtcaagcacc gcatcgccga gctgcgtctg cgcaagcgct
      121 tcggcatctc ggtgctggcg attacccgcg gcgaccaggt gttccgcgac gacgtgcgcg
      181 gggtcagcct gcgcgccggc gacacggtgg tgctgcacag caactggcgc gacctggcgc
      241 tggccgccga ggacaaggac ctggtcgtgg tcaccgacat ccccaaggag gagcagcgcc
      301 ccggcaagat ctggcaggcg gtgggtttct tcctgatggc gcaggggttg gcgctgttca
      361 ccccgctgga cctgtcgctg tcgatgatgg ccggcgccat cgcgatgctg ctgaccggcg
      421 tgctgaacat ggacgaggca tacaaggcga tcaactggaa gacgatcttc gtggtcgcct
      481 gcctgatccc gctgggctgg tcgatggacg ccaccggcac cgccgcctgg cttgcgcagc
      541 tggtgttgac gcatcttggc ggcgtcgcgc cgtgggtgct gcagttgtgc gtggccttgc
      601 tcaccctgct ctttgcccag gtgatgtcca acgtgggcgc cacggtgatg atggtgccgg
      661 tggcgatcag cgtggcggtg gccaccggcg ccaatccggc ggcctatgcg ctgatcgtgg
      721 cggtgtcctc ctccaacacc ttcctgatca gcgccggcca ccccgcgctg atgatggtca
      781 ccggccccgg tggctacaag ggcaaggatt tcctgcgcgt cggcgcgccg ctgacggttc
      841 tgatgctggt ggcgacgctg ctgatggtga acctgatgtt ccgctgagca gccgggattc
      901 gggagtcggc gaacttcagg gcagcgcggc gggatcgagg cagatgaagc cgtcgaccac
      961 ccgcaacggc acggcgcgca gcgactggcc gcggcaggga ccgccggtgc acaggccgtc
     1021 ggcctggttg aagacggcgc cgtgcaccgc gcagatcaga ctgtcgttct tcagcaggaa
     1081 cttgccgggc gcgtagtcca gccggttgcc ggcatgcggg cagatgttga gatagccgtt
     1141 gacctgctcg ccccggcgca gcaggatcag gctctcctcg ccatcggcca gcatcgcgtc
     1201 caccgcggtg gcgccgccat cgggcacctg ctccagtgcg catacggcat gcgcctgcga
     1261 cgatccggtc tcgttcactg tatccatcgg cacttgcctc gcggttcgcg aggccccatc
     1321 gtggtagcgt aagtcgttga ttttaccaca cgagttttta acacatgcgc ctctacctgc
     1381 attccatgcg tcgcccacgc catccgctgg cgcgcttcct gtcgctgctg ctgggtctgg
     1441 ccgtgatcgg cgtgctgctg gtgttcggcc tggtggtggc cggcgtgctg ctgatcggcg
     1501 gcgtgatcgt gctggcgatt cgccagtgga agcaggcgca ggcacccgcc ggcgtgccga
     1561 cccagggccc ggcgaaaccc cagccggcgg tgctggaagg cgagttccgg gtgatccgcc
     1621 aggggcgtcc cgtcacgcat tgaggcgcac gtgcgcgctt acccgcggca cggggataat
     1681 gcggctcccc cacccgatcc ttccccatgt ccgagatccc cgcctccctc gcggccgacg
     1741 cgccgcgccg cctgaccgat ccccgcgtcc tgatcccgct ggggttgttc gcgctgtacg
     1801 tgatctgggg ttcgacctat ctgggcatcc gtttcgcgct ggaaagctac ccgccgttcc
     1861 tgctcgccgg cgtgcgcttt ctcggcgccg gcatcgcgct gtacggcttc ctgcgctggc
     1921 gcgggatggc gccgccgaca ccgctgcagt ggcgcaacgc ggcaatcacc ggcctgctgc
     1981 tgctcggcat gggcaacgga ctggtgtgct tcgccgaaga acgggtgagc tcgggcatcg
     2041 ccgcggtggc ggtggccagc atgccgctgt tcgcggcgct gttttccggc atgtacggcg
     2101 agtggccgca ccggcgcgag tcgatcggcc tggcgatcgg cttcgccggc gtgatcgtgc
     2161 tcaacctggg cagcagcctg gccggctcgt cgctgggcgc ggccgccctg ctgctggccg
     2221 cggcggcatg ggcgttcggc tcggtatgga gccgacgcca gacgatgccg cccggcccga
     2281 tgaacaccgc cgcgcagatg ctgtgcgcca gcctcgccct gctcgtcgtg ggcttcgcca
     2341 gtggcgagca cctgcccgca cacccgagca cccgcgccac gctggcactg gtctacctgg
     2401 cggtgttcgg ttcgatcatc gcgttcagcg cctacctgta cgtgctcaag cacgcgcgcc
     2461 cggcgctggc caccagctac gcctacgtca acccgccggt ggccgtgctg ttcggcgtgc
     2521 tgctggccgg cgaacacgtg gggccgttcg acctggccgg catggcgatc atcctggccg
     2581 gcgtggcggt gatcacgctc gccaggacac ggcgcgtggc gaaaccgtag gagcccgctc
     2641 gcgggcgatg ctcctgctct ggcgaatccc gaatccctgc cccaagagca tcgcccgcaa
     2701 gcgggcccct acctctgatg gtgcgctcga ccatggtcgg cttgccggca cggctgccgc
     2761 ggcgcgacga tgacgcgacc acggcggaga acggcatgaa cgcatcgcaa gacggctgga
     2821 tggcgcgcgc ggccctgcgc agcgcggcgt gggcggagcg ctggtttccg gatgcggggg
     2881 tgttcgcggc gctgggcgtg gtgctggtgg cgctggcg
//
LOCUS       DASSVL010000451         2003 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_970730, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000451 DASSVL010000000
VERSION     DASSVL010000451.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2003)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2003)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2003
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_970730"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            121..>2003
                     /locus_tag="VFM52_07945"
     CDS             121..>2003
                     /locus_tag="VFM52_07945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019467336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HET8765137.1"
                     /translation="MNLPVDPLTLCEVLGLTLLLGIGMAHFANPRRSFDRLVFGVFSG
                     GLLLRYAAWRSEATLPDATHGFASVWAYVFYAFEMLAIVYTVAAILVMVRRRDNRPLA
                     DAGEARLRAAGNRVPAVDVFIATYNEDWSILEKTIVAARAIDYPHVNVWVLDDTRRDW
                     LRERCAALQVNYLRRPDNRHAKAGNLNNGLRLSARHTNAPYILVLDADFAPQKNILYR
                     VLGLFADPKVALVQTPQFYYNADPIQHNLGVTDSWVDDQRVFFDVFQPSRDAWDSAFC
                     VGTSFVISRKAITAAGGFPTASVCEDIHTTYLLRRHGYITRWLNERLSVGLSAEGLVE
                     YINQRGRWCLGTLQVALLKDGPLRGRGYSLLDRLHYLHGMLHWFGKPFLLMMLVAPVL
                     YWYFGIAAFYTTPGQFLFYGVPAMLGFWFYSPWIAERKTLPIFSEVTQLVAAYAVTMT
                     IISACFRPFGRPFKVTAKGLDRSRVVIHWKLAGTFMALMVCLQVGAVSAVLQADLDGG
                     TIFNLAWTLLALVLSLGATVACVDLPRLRHEERFPFRRPARWRSGAREEASDFIDISL
                     SGAALRRGRTSPAPGERLRVLVPDVGWVPARVARRTRRRLCVHFETSEALRHRLIELI
                     FSKA"
BASE COUNT          293 a          713 c          636 g          361 t
ORIGIN      
        1 ccacgccgat ttcttctact accacctgcc ccacctcggg gcgacggcct gggctgcgct
       61 cgccgccaag ggatggaacc cgttcacggg caaacccatc gccaccacgg agcacgcgcc
      121 atgaaccttc ccgtcgaccc gctgacgctg tgcgaggtcc ttggcctgac gctgctgctg
      181 ggcatcggca tggcgcactt cgccaatccg cgccgcagtt tcgaccgcct ggtgttcggc
      241 gtgttttccg gcggcctgct gttgcgctat gcggcatggc gcagcgaagc gacgctgccc
      301 gacgccacgc atggtttcgc cagcgtgtgg gcctatgtgt tctacgcctt cgagatgctc
      361 gccatcgtct atacggtggc ggccatcctg gtcatggtgc gtcggcgcga caaccgcccg
      421 ctggccgatg cgggcgaagc gcggctgcgt gccgccggca accgcgtgcc cgcggtcgac
      481 gtcttcatcg ccacctacaa cgaggactgg tcgatcctgg aaaagaccat cgtcgccgcc
      541 agggcgatcg actatccgca cgtcaacgtg tgggtgctgg acgatacgcg gcgcgactgg
      601 ctgcgcgagc gctgtgccgc cctgcaggtg aactacctgc ggcgtcccga caaccgccac
      661 gccaaggccg gcaacctcaa caacggcctg cggctttccg cccggcacac caacgcgccc
      721 tacatcctgg tgctggatgc cgacttcgcg ccgcagaaga acatcctcta ccgcgtcctc
      781 ggcctgttcg ccgaccccaa ggtggcgttg gtgcagacgc cgcagttcta ctacaacgcc
      841 gatccgatcc agcacaacct gggcgtcacc gacagctggg tggacgacca gcgcgtcttc
      901 ttcgatgtgt tccagccgtc gcgcgacgcc tgggattcag cgttctgcgt gggcacctcg
      961 ttcgtgatct cgcgcaaggc gatcaccgcg gccggcggtt ttcccaccgc cagcgtatgc
     1021 gaggacatcc acaccaccta cctgctgcgc aggcacggct acatcacgcg ctggctcaac
     1081 gaacggctgt cggtgggcct gtccgccgaa ggcctggtcg aatacatcaa tcagcgcgga
     1141 cgctggtgcc tgggcacgct gcaggtggca ctgctgaagg atggcccctt gcgcggcagg
     1201 ggctacagcc tgctcgaccg cctgcattac ctgcacggca tgctgcattg gttcggcaag
     1261 ccattcctgc tgatgatgct ggtcgcgccg gtgctgtact ggtatttcgg catcgccgcg
     1321 ttctacacca cgcccgggca gttcctgttc tacggcgtgc ctgcgatgct cggattctgg
     1381 ttctacagcc cgtggatcgc cgagcggaag accctgccga tcttttccga ggtgacccag
     1441 ctggtggcgg cctatgccgt caccatgacc atcatctccg cctgcttccg cccgttcgga
     1501 cgtccattca aggtcaccgc caagggcctg gatcgcagca gggtcgtcat ccactggaaa
     1561 ctcgccggca ccttcatggc actgatggtc tgcctgcagg tcggcgcggt cagcgccgtc
     1621 ctgcaggcag acctggacgg cggaacgatc ttcaacctgg cctggacgct gctcgccctg
     1681 gtgctgtcgc tgggcgcgac cgtggcctgc gtggacctgc cgcggctgcg ccacgaagag
     1741 cgcttcccgt tccgccgtcc ggcccgctgg cgcagcggcg cgcgcgagga ggccagcgac
     1801 ttcatcgata tctcgctgag cggcgccgcc ctgcggcgcg gccggacctc gccggcgcct
     1861 ggcgaacgcc tgcgggtgct ggtccccgac gtgggctggg tgccggcgcg cgtggcgcgc
     1921 cgcacgcgcc ggcggctttg cgtgcacttc gaaaccagcg aggcgctgcg ccatcgcctg
     1981 atcgagctga tcttcagcaa ggc
//
LOCUS       DASSVL010000452         2474 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_956726, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000452 DASSVL010000000
VERSION     DASSVL010000452.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2474)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2474)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2474
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_956726"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1182
                     /gene="lepA"
                     /locus_tag="VFM52_07950"
     CDS             <1..1182
                     /gene="lepA"
                     /locus_tag="VFM52_07950"
                     /EC_number="3.6.5.n1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004083428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation elongation factor 4"
                     /protein_id="HET8765138.1"
                     /translation="GVVSLVRVMQGDIVPGSKILVMSTGRTHQVDSVGVFTPKRKVLP
                     ALRAGEVGWVTASIKDVHGAPVGDTLTLAADPAPKPLPGFQEMQPRVFAGLFPVDAED
                     YPALREALEKLRLNDAALRFEPESSEAMGFGFRCGFLGMLHMEIVQERLEREYDLNLI
                     STAPTVVYEVLRTDGTVMPLDNPAKLPQANLVEEIREPIIRANILTPPDYVGNVITLC
                     EEKRGRQVGIQYLGSQVQVSYELPMAEVVLDFFDRLKSVSRGYASLDYHFVRFEAGPF
                     VRVDTLINGDRVDALSLITHRAHADRRGRDLTEKMKELIPRQMFDVAIQAAIGSQVIA
                     RTTVKAMRKNVLAKCYGGDATRKKKLLEKQKEGKKRMKQVGRVEIPQEAFLAVLQVDN
                     K"
     gene            1192..1995
                     /gene="lepB"
                     /locus_tag="VFM52_07955"
     CDS             1192..1995
                     /gene="lepB"
                     /locus_tag="VFM52_07955"
                     /EC_number="3.4.21.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003479234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006465 - signal peptide processing
                     [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase I"
                     /protein_id="HET8765139.1"
                     /translation="MRWFEIALVALTLLTGLVWLADKLWLRKRREAAAGLLDAKEPML
                     VDYSRAFFPVLAVVLCLRSWVAEPFRIPSSSMMPTLEIGDFILVNKFAYGLRLPVTNT
                     KFLSIGEPERGDVVVFHPPMQPEQDWIKRVVGLPGDTVAYRNDTVYLNGQAFAYRPMG
                     RYVGKGQGAEATGAKVLMEEMPGRPHEVLERDDQPFFVQGEGEWVVPPGHYFVMGDNR
                     DNSEDSRFWPEGMHFLPEENLRGKAFLVWMHWDGSAGGVDFARLGRKIQ"
     gene            2037..2414
                     /locus_tag="VFM52_07960"
     CDS             2037..2414
                     /locus_tag="VFM52_07960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014647998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4845 domain-containing protein"
                     /protein_id="HET8765140.1"
                     /translation="MMRTQRGMTLIGFIIVLALVGFFAYIAMKLVPMYSEYYAVKQAL
                     AGLKAEPGIANQDPAKVQDLFFRRLYISYAENVKPANVTIERADNGWLMSVDYEVRKP
                     LVANLDVVGKFSTSETLTNASRD"
BASE COUNT          428 a          834 c          843 g          369 t
ORIGIN      
        1 ggcgtggtct cgctggtgcg ggtcatgcag ggcgacatcg ttccgggcag caagatcctg
       61 gtgatgtcga ccggccgtac ccaccaggtc gacagcgtcg gcgtgttcac ccccaagcgc
      121 aaggtgctgc cggcattgcg cgcgggcgag gtgggctggg tgacggcgtc gatcaaggac
      181 gtgcacggcg cccccgtcgg cgacacgctg acgctcgcgg ccgatcccgc gccgaagccg
      241 ctgccgggct tccaggaaat gcagccgcgc gtgttcgcgg gcctgttccc ggtcgatgcc
      301 gaggactacc cggcgctgcg cgaagcactc gagaagctgc gcctcaacga cgccgcgctg
      361 cgcttcgagc cggaaagctc cgaggcgatg ggcttcggct tccgctgcgg cttcctcggc
      421 atgctgcaca tggagatcgt gcaggagcgc ctcgagcgcg agtacgacct caacctgatc
      481 agcaccgcgc cgaccgtggt ctacgaggtg ctcaggaccg acggcacggt gatgccgctc
      541 gacaacccgg ccaagctgcc gcaggcgaac ctggtcgagg agatccgcga gccgatcatc
      601 cgcgccaaca tcctcacgcc cccggactac gtgggcaacg tgatcacgct gtgcgaggag
      661 aagcgcggcc gccaggtcgg catccagtac ctgggcagcc aggtgcaggt gagctacgag
      721 ctgccgatgg ccgaggtcgt gctggacttc ttcgaccgcc tgaagtcggt gtcgcgcggc
      781 tacgcgtcgc tcgactacca cttcgtccgc ttcgaggccg gcccgttcgt gcgcgtggac
      841 acgctgatca acggcgaccg cgtcgacgcg ctgtcgctga tcacgcaccg cgcccacgcc
      901 gaccgccgcg gccgcgacct gaccgagaag atgaaggagc tgatcccgcg gcagatgttc
      961 gacgtcgcca tccaggcggc gatcggctcg caggtgatcg cgcgcaccac cgtcaaggcg
     1021 atgcgcaaga acgtgctcgc caagtgctac ggcggcgacg ccacccgcaa gaagaagctc
     1081 ctcgagaagc agaaggaagg caagaagcgg atgaagcagg tcgggcgggt cgagatcccg
     1141 caggaggcct tcctcgccgt gctccaggtc gacaacaaat aaggacgccg catgcgctgg
     1201 ttcgaaatcg ccctggtcgc gctgaccctc ctcaccggcc tcgtctggct ggccgacaag
     1261 ctgtggctgc gcaagcggcg cgaggccgcc gccggcctgc tcgacgcgaa ggagccgatg
     1321 ctcgtcgact actcgcgcgc cttcttcccg gtgctcgcgg tggtgctttg cctgcgcagc
     1381 tgggtcgccg agcccttccg catcccgtcg agctcgatga tgccgacgct ggagatcggc
     1441 gacttcatcc tcgtcaacaa gttcgcctac ggcctgcgcc tgccggtcac caacaccaag
     1501 ttcctgtcga tcggcgagcc cgagcgcggc gacgtggtgg tcttccaccc gccgatgcag
     1561 cccgagcagg actggatcaa gcgcgtggtc ggcctgcccg gcgacaccgt ggcctaccgc
     1621 aacgacaccg tctacctgaa cgggcaggcg ttcgcgtacc gcccgatggg ccgctacgtc
     1681 ggcaaggggc agggggccga ggccaccggc gcgaaggtgc tgatggagga gatgccgggc
     1741 cgcccgcacg aagtcctgga gcgcgacgac cagcccttct tcgtgcaggg cgagggcgaa
     1801 tgggtggtcc cgcccgggca ctatttcgtc atgggcgaca atcgtgataa tagcgaggac
     1861 agccgcttct ggccggaagg catgcacttc ctgcccgagg agaacctgcg cggcaaggcc
     1921 ttcctggtgt ggatgcactg ggacggcagc gcgggcggcg tcgatttcgc caggctgggc
     1981 cgcaagatcc agtaacgggc cggccaccac cgtcgtcaca ggaaagggga attcggatga
     2041 tgcgcacgca acgcggcatg accctgatcg gtttcatcat cgtgctggcg ctggtgggct
     2101 tcttcgccta catcgccatg aagctggtgc cgatgtactc ggagtactac gcggtgaagc
     2161 aggcgctggc cggcctcaag gccgagcccg gcatcgccaa ccaggacccg gccaaggtcc
     2221 aggacctgtt cttccgccgc ctgtacatca gctacgcgga gaacgtgaag ccggccaacg
     2281 tcaccatcga gcgcgccgac aacggctggc tgatgagcgt cgactacgaa gtgcgcaagc
     2341 cgctggtcgc caacctcgac gtcgtcggca agttctccac ctcggagacg ctgaccaacg
     2401 cctcgcgcga ctgagcgcgc gaagcgaagg cgggcaggtg ccggcgcacg acggcgacgg
     2461 gaggcggcat ggcc
//
LOCUS       DASSVL010000453         2820 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1126079,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000453 DASSVL010000000
VERSION     DASSVL010000453.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2820)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2820)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2820
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1126079"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1105)
                     /locus_tag="VFM52_07965"
     CDS             complement(<1..1105)
                     /locus_tag="VFM52_07965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019464637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidogalycan biosysnthesis protein"
                     /protein_id="HET8765141.1"
                     /translation="MIEARFHDQLADIAAADWDALAADANPFTTHALLAGMEATGCIQ
                     PRWGWQPHHLTLHENGRLVAAAPLYLKTNSHGEFTFDWSWVDAWERAGGRYYPKLLCG
                     VPYSPVTGPRLLARGDARLQRALVAAMRAEAERLQLSSVHANFLTADEAAAFDADWLA
                     RGDVQFQWRNRGWASFDAFLAALNHKKRKNLLHDRADVAASGLRIEWRAGRTLSRDEW
                     RAVHALYLRTFAEKGNRATLTPAFFAHLGTLGDTAQLALARDGDGIAAMALFLAGGNV
                     LYGRYWGSRVEVPGLHFELCYYQGIDHTITRGLQRFEPGAQGEHKLARGFLPVRTHSR
                     HLILHAGFRAAVREALRDEASAVDRYADECLAHS"
     gene            complement(1118..1663)
                     /locus_tag="VFM52_07970"
     CDS             complement(1118..1663)
                     /locus_tag="VFM52_07970"
                     /inference="COORDINATES: protein motif:HMM:NF021482.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2199 domain-containing protein"
                     /protein_id="HET8765142.1"
                     /translation="MDAAVAACPACGQIHADDLPELAFRRPDAVEALKPDERESDVQE
                     SDYFCALRGERYFVSTTLALPVAGRGDYTLRVWAEMDEDNFYRVLAFWEDEGREDRPS
                     FDAMLANAIPSLPETTGLAVTLTIAGPAQRPMLRIADASHPLHAEQADGITPHRASAY
                     AALIDGHRGVDATAVTPPAED"
     gene            complement(1666..2631)
                     /gene="trxB"
                     /locus_tag="VFM52_07975"
     CDS             complement(1666..2631)
                     /gene="trxB"
                     /locus_tag="VFM52_07975"
                     /EC_number="1.8.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019464636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004791 - thioredoxin-disulfide reductase
                     (NADP) activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-disulfide reductase"
                     /protein_id="HET8765143.1"
                     /translation="MTNPTKHARLLILGSGPAGYTAAVYAARANLKPVQVTGLQQGGQ
                     LTTTTDVDNWPGDVEGLQGPVLMQRMAKHAERFATETVFDEISKVDLSQRPFKLTGDW
                     GEYTADALIIATGATAKYLGIPSEEKFKGKGVSACATCDGFFFRDQEVAVIGGGNTAV
                     EEALYLANIASKVYLVHRRDSLRAEKIMQDKLFEKAAAGRIELVWNHTVEEILGDDSG
                     VTGVRVKDVHSGATRDIAVTGFFVAIGHTPNTKIFEGQLAMHDGYLKIHSGQSGMATM
                     TSVEGVFAAGDVADHIYRQAVTSAGFGCMAALDAERWLDQQKPAA"
BASE COUNT          380 a          935 c         1044 g          461 t
ORIGIN      
        1 ggctgtgcgc caggcactcg tcggcgtagc ggtcgaccgc gctcgcctcg tcgcgcagcg
       61 cctcgcgcac ggcggcgcga aagcccgcgt gcaggatcag atgccgtgaa tgcgtgcgaa
      121 ccggcaggaa gccgcgtgcc aatttgtgtt caccctgtgc gcccggttcg aagcgttgca
      181 ggccgcgcgt gatggtgtgg tcgatgccct ggtagtagca cagctcgaag tgcagccccg
      241 gcacttcgac ccggctgccc cagtagcgcc cgtacagcac gttgccgccg gcgagaaaca
      301 gcgccatcgc ggcgatgccg tcgccgtcgc gggccagcgc gagctgcgcg gtgtcgccga
      361 gcgtgccgag gtgggcgaag aacgccggcg tcagcgtggc gcggttgcct ttctccgcga
      421 aggtgcgcag gtagagcgca tgcacggcgc gccattcatc gcgggaaagc gtgcggccgg
      481 cgcgccattc gatccgcagc ccgctcgccg ccacgtccgc gcggtcgtgc aggaggttct
      541 tgcgcttctt gtggttcagc gcggcgagga acgcgtcgaa cgacgcccag ccgcggttgc
      601 gccactggaa ctgcacgtcg ccgcgcgcga gccagtcggc gtcgaacgcc gcggcctcgt
      661 ccgcggtgag gaagttggcg tgcaccgacg acagctgcag gcgttcggct tccgcacgca
      721 tcgccgcgac cagcgcccgc tgcaggcggg cgtcgccgcg cgcgagcagg cgcggcccgg
      781 tcaccggcga gtagggcacg ccgcacagga gctttgggta atagcggccg ccggcgcgtt
      841 cccaggcgtc gacccagctc cagtcgaagg tgaactcgcc gtgcgaattg gtcttgaggt
      901 acagcggcgc agccgcgacg aggcggccgt tttcgtgcag ggtcaggtga tgcggctgcc
      961 aaccccagcg cggctggatg cagccggtgg cttccatgcc ggccagcagc gcatgcgtgg
     1021 tgaacgggtt ggcgtcggcg gccagcgcat cccagtcggc ggcggcgatg tcggcgagct
     1081 ggtcgtgaaa gcgggcctcg atcacgacgc gcgcgagtca gtcttcggcg ggtggcgtca
     1141 cggcggtcgc gtccacgccg cggtggccgt cgatcagcgc cgcgtaggcg ctggcgcgat
     1201 gcggcgtgat gccgtcggct tgctcggcgt gcagcgggtg gctggcgtcg gcgatgcgca
     1261 gcatcgggcg ctgcgccggg ccggcgatgg tcagggtgac ggcgaggccg gtggtttccg
     1321 gcaggctggg gatggcgttg gcgagcatcg cgtcgaagct ggggcgatcc tcgcggccct
     1381 cgtcctccca gaacgcgagc acgcggtaga aattgtcctc gtccatttcc gcccacacgc
     1441 gcagcgtgta gtcgccgcga ccggccaccg gcagcgccag cgtggtgctg acgaaatagc
     1501 gctcgccgcg cagcgcgcag aagtagtcgg actcctgcac gtcgctttcg cgttcgtcgg
     1561 gcttcagtgc ctcgaccgcg tcgggacgcc ggaacgcgag ctccggcagg tcgtccgcat
     1621 ggatctgccc gcacgccggg cacgcggcga cggcggcatc catcgtcatg ccgccggttt
     1681 ctgctggtcg agccagcgct cggcatcgag cgccgccatg cagccgaacc cggccgaggt
     1741 gacggcctgc cggtagatgt ggtcggcgac gtcgccggcg gcgaacacgc cttcgaccga
     1801 ggtcatcgtc gccatgccgc tctggccgct gtggatcttg aggtagccgt cgtgcatggc
     1861 gagctggccc tcgaagatct tggtgttcgg cgtgtggccg atggcgacga agaaaccggt
     1921 caccgcgatg tcgcgggtgg caccgctgtg cacgtccttg acgcgcacgc cggtcacgcc
     1981 gctgtcgtcg ccgaggattt cctcgacggt gtggttccac accagctcga tcctgcccgc
     2041 cgcggccttc tcgaacagct tgtcctgcat gatcttctcg gcgcgcaggc tgtcgcggcg
     2101 gtgcacgagg tagaccttgc tggcgatgtt ggcgaggtac agcgcctcct cgaccgcggt
     2161 gttgccgccg ccgatcacgg caacttcctg gtcgcggaag aagaagccgt cgcaggtggc
     2221 gcaggcggac acgcccttgc ccttgaactt ctcctcgctc gggatgccga ggtatttcgc
     2281 cgtggccccg gtcgcgatga tcagcgcgtc ggcggtgtat tcgccccagt cgccggtgag
     2341 cttgaacggg cgctgcgaga gatcgacctt gctgatctcg tcgaacacgg tctcggtcgc
     2401 gaagcgctcc gcgtgcttgg ccatgcgctg catcagcacc gggccctgca ggccctccac
     2461 gtcgccgggc cagttgtcga cgtcggtggt ggtggtgagc tggccgccct gctgcaggcc
     2521 ggtgacctgc accggcttga ggttggcgcg cgcggcatac accgcggcgg tgtagccggc
     2581 cgggccggaa ccgaggatca gcaggcgggc gtgcttggtg gggttggtca tgcgcggaat
     2641 ccttgcaggt gggcgaccgc gcgggcggtc gcgtcgaccc gcaagcatgg ggagcgaagc
     2701 gccccgattc aagccgccgg gtcaaatcgg ccgcgcgtcg gctactgcag cttgcgcggc
     2761 ctgtgtagac ttgcggcacg ttgtttcgca ggaagtcgtt accggtggcg cacggcgcag
//
LOCUS       DASSVL010000454         3590 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_603550, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000454 DASSVL010000000
VERSION     DASSVL010000454.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3590)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3590)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3590
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_603550"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(23..640)
                     /locus_tag="VFM52_07980"
     CDS             complement(23..640)
                     /locus_tag="VFM52_07980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008267534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysE/ArgO family amino acid transporter"
                     /protein_id="HET8765144.1"
                     /translation="MPMTAWFAGLAAGAGLIIAIGAQNAFVLRQGLQRRHVGAVVLVC
                     IAADLVLITLGVAGLGLLVRGSPGVLQVVRYAGVAFLAAYGVLALHRAWRGESGLRPA
                     DDAATSRRRALLACLGFTLLNPHVYLDTVVLLGSLSTHYAGVGRWFFAAGAGTASVLW
                     FTALGYGARALLPVFRSPVAWRVLDVLVAAFMLALAGLLAARPLA"
     gene            759..1679
                     /locus_tag="VFM52_07985"
     CDS             759..1679
                     /locus_tag="VFM52_07985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011038078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator ArgP"
                     /protein_id="HET8765145.1"
                     /translation="MNLLHPQLAAFAAVLDEGSFEAAARRLAVTPSAISQRVKALEDR
                     LGQVLILRQSPCRATTAGTHLLRGVRQMQTLETETLDILRPERAAATTPVTLAIAVNA
                     DSLATWLLGALASLHARHGLLFDLRVEDQDHSLALLRDGSVSGAVTAEAHPVAGCTAR
                     PLGVMRYLPVASPAFVARHFAGGLDAAALGTAPLLVFNRKDALQWRFMRRITRARLAP
                     PTHYLPSSTGFVEAAALGLGWCMAPESLLRQPLQDHTVQPIAPGHWLDVPLYWQHLAA
                     RSTALDQLTAALLAAAHRDLRQRGAGKQTP"
     gene            complement(1688..2977)
                     /gene="bioA"
                     /locus_tag="VFM52_07990"
     CDS             complement(1688..2977)
                     /gene="bioA"
                     /locus_tag="VFM52_07990"
                     /EC_number="2.6.1.62"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008211357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004015 -
                     adenosylmethionine-8-amino-7-oxononanoate transaminase
                     activity [Evidence IEA];
                     GO_process: GO:0009102 - biotin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylmethionine--8-amino-7-oxononanoate
                     transaminase"
                     /protein_id="HET8765146.1"
                     /translation="MNADSFDQSHLWHPYSKLGATPPALKVARADGVRLELADGTRLI
                     DGMASWWCAIHGYHHPVLDRAITEQLGKMAHVMFGGLTHEPAIALGKLLLSIVPKGLD
                     AVFYADSGSVAVEVALKMAIQYQHAKGRPRKANVATVRRGYHGDTWNAMSVCDPVTGM
                     HGLFGPTLPQRHFVPTPATPFGGEWNAADIAPVARLFAEHADEIAAFIIEPVVQGAGG
                     MRFYHPQYLAELARLCRAHDVLLICDEIATGFGRSGKLFACEWAGITPDILCLGKALT
                     GGYLTLAATLCTREVAAAIGHAEPGVFMHGPTFMANPLACAVALASTRLLLAGDWHGN
                     VARIERTLRERLAPARTFAHVADVRVLGAIGVIELKQPVRLARLQQRIVDLGIWLRPF
                     GKLVYVMPPYIANDAELAKLAAGMCALVAGLDAADLG"
BASE COUNT          551 a         1296 c         1232 g          511 t
ORIGIN      
        1 gatacccgct gctggggtgc ggtcaggcca gcggccgtgc tgccagcagc ccggccagcg
       61 ccagcatgaa ggctgccacc agcacgtcca gtacgcgcca cgccaccggg ctgcggaaca
      121 ccggcagcaa cgcacgcgcg ccgtagccga gcgcggtgaa ccacaggacg ctggcggtac
      181 cagcgccggc cgcgaagaac cagcgcccga ctcccgcgta atgggtggac aggctgccca
      241 gcagcaccac ggtatccagg tacacgtgcg gattgagcag ggtgaagccg aggcaggcca
      301 gcagcgcgcg ccggcggctg gtcgcggcat cgtccgccgg ccgcaggccg ctctcgccac
      361 gccacgcccg atgcagcgcc agcacgccgt acgcggccag gaacgcgacg ccggcgtagc
      421 gcacgacctg cagcaccccc ggcgagccgc gcaccagcag gccaagcccg gccacgccga
      481 gcgtgatcag caccaggtcc gcggcgatgc agaccagcac cacggcgccg acgtgacggc
      541 gctgcaggcc ctggcgcaac acgaacgcgt tctgggcgcc gatggcgatg atcaggcccg
      601 caccggcggc gaggccggca aaccaggcgg tcattggcat ggacgtggat tccatgggga
      661 aagccgcatg ctgcacgtac cgactgtttc agtaaaacta aatttgcttg gcatggatta
      721 gcgatgctta tcatggccac cggctgccgg gacatcccat gaacctgctg catccccaac
      781 tcgccgcgtt tgccgcggta ctcgacgaag gcagcttcga ggccgccgcc cgccgccttg
      841 cggtcacgcc gtcggcgatc tcgcaacggg tcaaggcgct cgaggatcgg ctgggccagg
      901 tgctgatcct gcgccagtcg ccgtgccgcg cgacgacggc gggtacgcac ctgctgcgcg
      961 gcgtccgcca gatgcagacg ctggaaaccg aaaccctgga catcctgcgg ccggagcgcg
     1021 ccgcagccac aacaccggtg accctcgcca tcgcggtgaa cgcggactcg ctggccacct
     1081 ggctgctcgg cgcgctggcc agcctgcacg cgcggcacgg cctgttgttc gacctgcggg
     1141 tcgaagacca ggaccactcg ctggcgctgc tgcgcgacgg cagcgtgtcc ggcgcagtca
     1201 ctgccgaggc gcacccggtc gccggttgca cggcgcgccc gctgggcgtg atgcgctacc
     1261 tgccggtggc gtcgccggcc ttcgtggcgc gccactttgc cggcggcctg gatgccgccg
     1321 cattgggcac cgcgccactg ctggtgttca accgcaagga tgccctgcaa tggcgcttca
     1381 tgcgccgcat cacccgcgcg cggctcgccc cgcccacgca ctacctgccc tcgtccaccg
     1441 gcttcgtgga agcggcagcg ctcggcctgg gctggtgcat ggcgccggag tccctgctcc
     1501 gccaaccctt gcaggaccac accgtgcagc ccatcgcgcc cggccattgg ctggacgtgc
     1561 cgctgtactg gcaacacctg gcggcgcgtt cgacggcgct ggatcagctc accgccgccc
     1621 tgctggcggc cgcgcatcgg gatctgcgcc agcgcggcgc ggggaagcaa accccgtagc
     1681 cgcggcctca acccaggtcg gcagcgtcca ggccggccac cagcgcgcac atgccggccg
     1741 cgagtttcgc cagttcggca tcgttcgcga tgtatggcgg catcacgtac accagcttgc
     1801 cgaacggacg cagccagatg ccgagatcga cgatgcgctg ttgcagtcgc gcgagacgca
     1861 cgggctgctt cagctcgatc acgccgatcg cgcccagcac ccgcacgtcg gccacgtgcg
     1921 cgaacgtgcg cgccggcgcc agccgttcgc gcagcgtgcg ctcgatgcgg gcgacgttgc
     1981 cgtgccagtc gccagcaagc agcagccgcg tcgaagccag cgccacggcg caggccagcg
     2041 ggttggccat gaaggtcggg ccgtgcatga atacgccggg ttcggcatgg ccgatggcgg
     2101 cggccacctc gcgcgtgcac agcgtcgccg ccagcgtgag gtagccaccg gtgagcgcct
     2161 tgccgaggca caggatgtcc ggcgtgatgc cggcccactc gcaggcgaac agcttgccgc
     2221 tgcggccgaa gccggtggcg atctcgtcgc agatcagcag cacgtcgtgc gcgcggcaca
     2281 ggcgcgccag ctcggcgagg tattgcggat ggtagaagcg catgccgccg gcgccctgca
     2341 ccaccggctc gatgatgaaa gccgcgatct cgtccgcgtg ttcggcaaac agtcgggcga
     2401 ccggcgcgat gtccgccgcg ttccactcgc cgccaaacgg cgtggccggc gtgggcacga
     2461 agtggcgctg cggcagcgtc ggcccgaaca ggccgtgcat gccggtgacc gggtcgcaca
     2521 ccgacatcgc gttccacgta tcgccgtgat agccgcgccg cacggtggcg acgttcgcct
     2581 tgcgcggacg tcccttcgcg tgctggtact ggatggccat tttcagcgcc acctccaccg
     2641 cgaccgagcc ggagtcggcg tagaacaccg cgtccagccc cttgggcacg atggagagca
     2701 gcagcttgcc gagcgcgatc gccggctcgt gcgtgagccc gccgaacatc acgtgcgcca
     2761 tcttgccgag ctgctcggtg atcgcgcggt ccagcaccgg atggtggtag ccgtggatcg
     2821 cgcaccacca cgaggccatg ccgtcgatca ggcgcgtgcc gtcggccagc tccagccgca
     2881 cgccgtcggc gcgcgccacc ttcagcgccg gcggcgtcgc gccaagcttg ctgtaggggt
     2941 gccagaggtg ggattggtcg aaggagtcgg cattcatgcg gcatggttcc gtgatgggtg
     3001 cgcgggcaga agcagccccc tcaccccagc cctctccccc gaactgcgtt cgggggagag
     3061 ggggctgaaa gcggcttcgg gcggcgtgcc tgcagcgcgt gcgatttcag catcggcagc
     3121 aacatgcctt cgctgcgtcc ggttttcggc gacggcggca gggccatgaa ggtatcgcac
     3181 gggtggtgga gactggatgg ggcgtgttcg gacgccgtgg ttctcttgcg ggtgcgcgat
     3241 tgtgtcccac tccgtggcga aaatccccga cctcgtgtgc gcttgggctc cctctccccc
     3301 aacggctttt tgttggggga gagggctggg gtgagggggc cgcccttcgc caaaagcggc
     3361 cccctcaccc tgccctctcc cccggcacag tcgggggagc gggttcaagc cagagcgccg
     3421 cgtgcatcgg ctgaaacgcc tcaacctcgg ccatgctgca cgccatctac cgagatgcgt
     3481 tgacctcagc cgaggcaccc cgctatcggt tgaggcgcct cgcgcccacc gtcggggtac
     3541 cccgcccatg gcaggaacac cacaactcgc ccgcgcttgg gctccctctc
//
LOCUS       DASSVL010000455         2243 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_843547, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000455 DASSVL010000000
VERSION     DASSVL010000455.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2243)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2243)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2243
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_843547"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            140..562
                     /gene="arfB"
                     /locus_tag="VFM52_07995"
     CDS             140..562
                     /gene="arfB"
                     /locus_tag="VFM52_07995"
                     /EC_number="3.1.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007804225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003747 - translation release factor
                     activity [Evidence IEA];
                     GO_process: GO:0006415 - translational termination
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alternative ribosome rescue aminoacyl-tRNA
                     hydrolase ArfB"
                     /protein_id="HET8765147.1"
                     /translation="MLTISRTLSIPEPELVEHFLRADGPGGQHVNRTESAVELRFDVA
                     ASPTLPEPLRARLLARRDRRLTDAGVLVIQARRFRDQARNREDARERLVALLRAALVV
                     PKKRVATRPTRASKERRLAGKQQRGKLKQTRSRRVDLD"
     gene            562..1155
                     /locus_tag="VFM52_08000"
     CDS             562..1155
                     /locus_tag="VFM52_08000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007804227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1-acyl-sn-glycerol-3-phosphate acyltransferase"
                     /protein_id="HET8765148.1"
                     /translation="MRPIPAPGELPAHMPHLTDNWRRAMCRGVLRLAGWRLVGEFPDV
                     PKLVMIAAPHSSWWDGIWGLLMKVGIGADINFMAKQELFRAPLGALLRGLGGIPIARR
                     AAHGVVEQMIERFDRGERLWLGIEPEGTRRHVPKWKSGFWYIAHRARVPVFPVAFNYP
                     DKTIHLGPLHPTTGDLAADTERLRAFYRPFQGKHHGL"
     gene            complement(1171..2079)
                     /locus_tag="VFM52_08005"
     CDS             complement(1171..2079)
                     /locus_tag="VFM52_08005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017463320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HET8765149.1"
                     /translation="MRAFVSVVKLGTLTRAAEALYLSQPTISLQLQALERELGVSLLE
                     RRRRRINLTDAGEALYEMARPLVEGWDTLDRDFQARVQGLQAGRLTIAAGTSTIQYLL
                     PDLVRRYRERFPAVRLQLANVTGKDGMALLRADEADFAVGSLLDVPNDIAWAPVQHYD
                     PMLIMPPDHPLAAKDKITLEDISPYGLILPPQRLSTYRLVDLVFQQNQVPYKVAIEVG
                     GWDVIKEYVALGLGVSIVTGICITEADRARLAVRNMSRWFPQRSYGVVMRKGKFLSAE
                     ARAFIDLIRPGLLTWRDYDEPGQSSR"
BASE COUNT          318 a          800 c          780 g          345 t
ORIGIN      
        1 gccgaccgcg gcaacaacgg gtacgccatg ccgtgagggt tggtggtgtt gccgcggggg
       61 ctacggtcgg ggtgcaccac agcccacgtc gtggcactcg gcagccccgt aacggccgcc
      121 atcgcctaca cttcccgcca tgctgacgat cagccgcacg ctgtctattc ccgagcccga
      181 gctggtcgag cacttcctgc gtgcggacgg ccccggcggg cagcacgtca accgcaccga
      241 gagcgcggtg gaattgcgct tcgacgtcgc cgcctcgccg acgctgcccg aaccgctgcg
      301 cgcgcggctg ctggcgcgcc gcgaccggcg cctgaccgac gccggcgtgc tggtgatcca
      361 ggcgcggcgg ttccgcgacc aggcccgcaa ccgcgaggat gcgcgcgaac ggttggtggc
      421 gttgctgcgc gccgcgctgg tggtgccgaa gaagcgcgtc gccacccggc ccacgcgggc
      481 ctcgaaggag cgccgcctcg ccggcaaaca gcagcgcggc aagctcaagc agacccgttc
      541 gcggcgcgtg gacctcgatt gatgcgcccg atcccggcac cgggcgaact ccccgcgcac
      601 atgccgcacc tcaccgacaa ctggcgccgc gccatgtgcc gcggcgtgct gcggcttgcc
      661 ggctggcgcc tggtgggcga gtttccggac gtgccgaaac tggtgatgat cgccgcgccg
      721 cactcctcgt ggtgggacgg catctggggc ctgctgatga aggtcggcat cggcgccgac
      781 atcaacttca tggccaagca ggagctgttc cgcgccccgc tcggcgcctt gctgcgcggc
      841 ctcggcggca tccccatcgc gcgccgcgcc gcgcatggtg tggtcgagca gatgatcgag
      901 cgcttcgacc gcggcgagcg cctgtggctc ggcatcgagc ccgaaggcac gcgccgccac
      961 gtgccgaagt ggaagagcgg tttctggtac atcgcccacc gcgcgcgggt gccggtgttc
     1021 ccggtcgcct tcaactaccc ggacaagacc atccacctcg ggccgctgca ccccaccacc
     1081 ggcgacctcg ccgccgatac cgagcggctg cgcgcgttct accggccgtt ccagggcaag
     1141 caccacgggc tgtagccgtg gcggccgcgc tcagcgcgac gactgccccg gctcgtcgta
     1201 gtcgcgccag gtcagcaggc ccggccggat caggtcgatg aaggcgcgcg cttcggcgga
     1261 gagaaacttg cccttgcgca tcaccacgcc gtagctgcgc tgcgggaacc agcgcgacat
     1321 gttgcgcacc gcgaggcgcg cgcggtcggc ctcggtgatg cagatgccgg tgacgatgga
     1381 gacgccgagg ccgagcgcga cgtattcctt gatgacatcc cagccgccga cctcgatcgc
     1441 caccttgtac ggcacctggt tctgctggaa cacgaggtcg accaggcggt aggtggacag
     1501 ccgctgcggc ggcaggatca ggccgtatgg cgagatgtcc tccagcgtga tcttgtcctt
     1561 cgccgccagc ggatggtccg gcggcatgat caacatcgga tcgtagtgct gcaccggcgc
     1621 ccaggcgatg tcgttgggca cgtccagcag cgagcccacc gcgaagtcgg cctcgtccgc
     1681 gcgcagcagc gccatgccgt ccttgccggt gacgttggcc agttgcaggc gcacggcggg
     1741 gaaacgctcg cggtagcggc gcaccaggtc aggcaagagg tactggatgg tcgaggtgcc
     1801 ggcggcgatg gtcagccggc cggcctgcag gccctgcacc cgggcctgga agtcgcggtc
     1861 gagcgtatcc cagccctcga ccagcggccg cgccatctcg tacagcgcct cgccggcgtc
     1921 ggtgaggttg atgcggcggc ggcggcgctc cagcaagctc acgcccagct cccgctccag
     1981 cgcctgcagc tgcaggctga tggtgggttg cgacaggtac agcgcctcgg cggcgcgggt
     2041 cagggtaccc agtttgacca cgctgacgaa ggcgcgcagc tgcttgtggc ggttgccctt
     2101 gtagtagtag cgctcggcgg cttcgaccgc ctgctggccc ctcgcggccg cttttgcggg
     2161 cttcgcccgg cgcccctgaa ctttccggtt cactgccgta gtcctccccg agtgccgttt
     2221 cgatgcactt ttgcatacta ctt
//
LOCUS       DASSVL010000456         3829 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1055830,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000456 DASSVL010000000
VERSION     DASSVL010000456.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3829)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3829)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3829
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1055830"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..375
                     /locus_tag="VFM52_08010"
     CDS             <1..375
                     /locus_tag="VFM52_08010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008215127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0050380 - undecaprenyl-diphosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0016311 - dephosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl-diphosphate phosphatase"
                     /protein_id="HET8765150.1"
                     /translation="AILVGIAQMVAGVFPGTSRSGATIFTAMLFGTSNRAAATEFAFL
                     VGIPTMYAATGYELLKVWKSGGAAHEDWTALIVGFIVSLVVAFAAVKWLLSYIRTHRF
                     TAFAVYRIALGAALLLLMPAGA"
     gene            complement(422..2500)
                     /locus_tag="VFM52_08015"
     CDS             complement(422..2500)
                     /locus_tag="VFM52_08015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017168227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015267 - channel activity [Evidence IEA];
                     GO_process: GO:0015891 - siderophore transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HET8765151.1"
                     /translation="MGSAATARQEAAAKALPAVQVNASRLRVDPRDVPAALSVVAVDP
                     GQVGQPGVNLSEALVGVPGVLARDRQNYAQDEQFSIRGFGARSTFGVRGVRLFVDGIP
                     ATMPDGQGQVSGFNLDMGGRLEILRGPFSVLYGNASGGVVQLWTAPGTAVPQTTLGVS
                     AGSHDGFRYSADTRGMLGDVDYNIAAAQFLSGGYRGHSRVNRQTAHARFGIPFGGQRK
                     LSVVLDHFNQPRAEDPMGLTRAQLAADPRRASPAAPQYDTRKRTRQDQLGLVYEQAFD
                     HGDRLRIAGYFGHRDILQHQSIPVATQRNPLQPGGVVAPDTRYGGLDLRWTHDGRLFG
                     RDTEFVLGGGGDAQWQRRRGYQNFVGDTLGVTGALRRDENDDVDNLDAYAQWYWYVAE
                     RWSLLLGLRHDRVRFDERDHYVTPTNPDDSGRVDYTATTPVLGVLFHPRDDLQLYASL
                     GRGFETPSYNELGYRSDGQPGFAFNLRAARSINRELGLKWQPTPALHAGLAVFRADTR
                     DELAVATSESGRATYRNVGAARRQGIELSVAGTIAPAWRIEAGFTRLQAVFRNGFLAC
                     AGTPCPVPGVPVRPGARIPGVPGIYGSLRLQHGAELGWREGLTLTGAGNVVANDVQTA
                     RAAGYGLVGVDVAYVFAFGSTQRLQLSARVDNLANRRYVGSVIVNDGNGRYYEPGPER
                     SWMLGARLSF"
     gene            complement(2728..3720)
                     /locus_tag="VFM52_08020"
     CDS             complement(2728..3720)
                     /locus_tag="VFM52_08020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008215126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HET8765152.1"
                     /translation="MEDFSAITSFVRVVEARSFAAAAVQLGMTPSGVSRAVSRLEEQI
                     GVRLLFRSTRALRLTDDGESFYQRCKAILADLGEAVDALNYARTKPSGKLRVAVNVSV
                     GRAALIPHLAEFEARYPDIRLELSMSDRNIGLIEEGIDCAIRMGELEDSNLVARKLGY
                     FSNVLCAAPSYLERHGTPVTIDDLKQHHCINYVYPTSGRPYQWQFDTPDGRLALDVDA
                     HLLINDGESVIQAAMAGLGIIQAPHWLAACAISAGKLKVIMEDTISTGSPVWIVYPQR
                     KHLSARVQAFLEWVHELFDRTNLPACKLGMALPLKATKATRGAGRDKAVASVAQ"
BASE COUNT          575 a         1353 c         1303 g          598 t
ORIGIN      
        1 gcgatcctgg tgggcatcgc gcagatggtg gcgggcgtgt tccccggcac ctcgcgctcc
       61 ggcgcgacga tcttcacggc gatgctgttc ggcaccagca accgcgccgc ggccaccgag
      121 ttcgcgttcc tggtgggcat ccccaccatg tacgccgcca ccggctacga gctgctgaag
      181 gtgtggaaaa gcggcggcgc cgcacacgag gactggaccg cgctgatcgt gggtttcatc
      241 gtctcgctgg tcgtggcctt cgccgcggtg aagtggctgc tgagctacat ccgcacgcac
      301 cgtttcacgg cattcgcggt ctaccgcatc gcgctgggcg cggccttgct gctgctgatg
      361 ccggccggcg cctgagccgc accgggggtc gcccgacgtc ggctggagcc gtggcggcga
      421 atcagaagct cagccgcgca ccgagcatcc agctgcgctc cgggcccggc tcgtagtagc
      481 gaccgttgcc gtcgttgacg atcaccgagc ccacgtagcg gcggttggcc aggttgtcga
      541 cccgcgcgct caattgcagc cgctgcgttg agccgaacgc gaacacgtac gccacgtcca
      601 cgccgaccag gccatagccg gcggcacgcg cggtctggac atcgttcgcc accacgttgc
      661 cggcgccggt gagcgtgagc ccttcacgcc agccgagctc ggccccgtgc tgcaggcgca
      721 gcgagccgta gataccgggc acgccgggga tgcgcgcacc cggccgcacc ggcacgccgg
      781 gcaccgggca cggcgtaccg gcgcaggcga ggaaaccgtt gcggaacacc gcttgcagac
      841 gggtgaagcc cgcctcgatc cgccatgccg gcgcgatcgt gcccgccacc gacagctcaa
      901 tgccctggcg ccgcgcggcg ccgacgttcc ggtaggtggc gcggccgctc tcgctggtgg
      961 ccacggccag ctcgtcgcgc gtgtcggcac ggaacacggc cagtcccgcg tgcagcgccg
     1021 gcgtgggttg ccacttcaag cccagttcgc gattgatgct gcgtgcggcg cgcaggttga
     1081 aggcaaaccc gggctggccg tcgctgcgat agcccagttc gttgtagctg ggcgtctcga
     1141 agccgcggcc gaggctcgcg tagagctgca gatcgtcgcg cggatggaac agcacgccga
     1201 gcaccggcgt ggtggcggtg tagtcgacgc gcccgctgtc gtccgggttg gtcggcgtca
     1261 cgtagtggtc gcgctcgtcg aagcgcaccc ggtcgtggcg caggccgagc agcagcgacc
     1321 agcgctccgc gacgtaccag taccactgcg cataggcatc gagattgtcg acatcgtcgt
     1381 tctcgtcgcg gcgcaacgcc ccggtcacgc cgagcgtgtc accgacgaaa ttctggtagc
     1441 cgcgccggcg ctgccattgc gcatcgccac cgccgcccag cacgaattcg gtgtcgcgac
     1501 cgaatagccg gccgtcgtgc gtccagcgca ggtccaggcc gccgtagcgg gtgtcgggag
     1561 ccaccacgcc gcccggctgc aacggattgc gctgggtggc caccgggatc gactggtgct
     1621 gcaggatgtc gcgatggccg aagtagccgg cgatgcgcag gcggtcgccg tggtcgaacg
     1681 cctgctcgta caccagcccg agctggtcct gccgggtgcg cttgcgcgtg tcgtattgcg
     1741 gtgccgccgg cgaggcccga cgcgggtcgg cggcaagctg ggcgcgcgtg agccccatcg
     1801 gatcttccgc gcgcggctgg ttgaaatggt cgagcaccac gctgagcttg cgttgcccgc
     1861 cgaacggaat gccgaaccgc gcgtgcgccg tctgccggtt gacgcggctg tgcccgcggt
     1921 agccgccgga gaggaactgc gcggccgcga tgttgtagtc cacgtcgccc agcatgccgc
     1981 gcgtgtcggc gctgtagcga aagccgtcgt ggctgccggc ggacacgccc agcgtggtct
     2041 gcggcaccgc ggtgcccggc gccgtccaca actgcaccac gccgccggac gcattgccgt
     2101 ataacaccga gaacggcccg cgcaggattt ccagccggcc acccatgtcg aggttgaagc
     2161 cggaaacctg gccctgccca tccggcatgg tggcggggat gccgtcgacg aacaggcgga
     2221 cgccgcgcac gccgaaggtg gaacgcgcgc cgaagccgcg tatcgagaac tgctcgtcct
     2281 gcgcgtaatt ctggcgatcg cgtgcgagca cgccgggcac cccgaccagc gcctcggaca
     2341 ggttcacgcc cggctgccca acctgccccg gatccaccgc caccacgctg agcgcggccg
     2401 gcacgtcgcg cgggtcgacc cgcagccggc tggcgttgac ctgcacggca ggcaacgcct
     2461 tggcggcagc ctcctggcgc gcggttgccg cactccccat cgttgccgcc cagcacggcg
     2521 gcgtaaccgc gacccacgcc acggataccg cgatcccggc cacggatcgc atcttggacg
     2581 caccaatctt catgctccat cgtagaacga agcccgcatt cgaccgcctg gccccgccct
     2641 gcgcgaagac gccggttgcg gtggcatgaa cgccaccacg cgacgcagca aggtcgaagc
     2701 cgcgcaccgc ttccggcgac cgccgaccta ttgcgccacg ctggccacgg ccttgtcgcg
     2761 gcccgcaccg cgcgtcgctt tggtcgcctt cagcggcagc gccatgccca gcttgcaggc
     2821 cggcaggttg gtgcgatcga acagttcgtg cacccactcc aggaaggcct gcacgcgcgc
     2881 agagagatgc ttgcgctgcg ggtagacgat ccacaccggc gagccggtgc tgatggtgtc
     2941 ttccatgatg accttgagct tgcccgcgct gatggcacag gccgccagcc agtgcggcgc
     3001 ctggatgatg cccagcccgg ccatcgccgc ctggatcacc gactcgccgt cgttgatcag
     3061 caggtgtgcg tccacgtcca atgcgaggcg gccgtccggg gtgtcgaact gccactgata
     3121 gggccggccg ctggtggggt agacgtagtt gatgcagtgg tgctgcttga ggtcgtcgat
     3181 ggtcaccggc gtgccgtggc gctccaggta ggacggcgcc gcgcacagca cattgctgaa
     3241 gtagcccagc ttgcgcgcga ccaggttgga atcctccagc tcgcccatgc ggatcgcgca
     3301 gtcgatgccc tcctcgatca ggccgatgtt gcggtcgctc atcgacagtt cgagccggat
     3361 gtccgggtag cgcgcctcga actcggcgag gtgggggatc agggccgcac ggcccaccga
     3421 cacgttcacc gccacgcgca acttgccgct gggcttggtg cgcgcgtagt tcaacgcgtc
     3481 caccgcctcg ccgaggtcgg ccaggatcgc cttgcagcgc tggtagaagg actcgccgtc
     3541 gtcggtgagc cgcagcgcac gcgtgctgcg gaacagcagg cgcacgccga tctgctcctc
     3601 cagccgcgac accgcgcggc tcaccccgga cggggtcatg cccagctgca cggcggcggc
     3661 cgcaaagctg cgcgcctcca ccacgcggac gaagctcgtt attgccgaaa aatcttccat
     3721 cttcgtcatt gtgacgtcat tcgtgactga ctgtcactag tggagttcac aaattggggg
     3781 ttttctatac tcgatagtac acctattatt cgcctcccca tcgtgctgc
//
LOCUS       DASSVL010000457         3448 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_886313, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000457 DASSVL010000000
VERSION     DASSVL010000457.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3448)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3448)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3448
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_886313"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            231..1469
                     /locus_tag="VFM52_08025"
     CDS             231..1469
                     /locus_tag="VFM52_08025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007807477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HET8765153.1"
                     /translation="MASIKPSSHLADVRYEIRGALTRRARELEAAGHDIIKLNIGNPA
                     RYGFETPAHLREAIAAHLHDSEAYCHEQGLDVAREAIAEQQRARGARHVAVERIFIGN
                     GVSELIDLSLRALLQPGDEVLLPSPDYPLWSAATILNGGAPRYYPCLAENGHLPDADE
                     IEALVTPRTRALVLINPNNPTGANYPRALLERIVAVAARHDLLLLVDEIYDEVLYDGA
                     VFQPLAEVAGDLPCVSFGGLSKVYRACGYRVGWLSLSGNPQRTADYRDALQLLAALRL
                     CANVTAQWTIPVALHGPATIRALTAPGGRLHEARRAVAEGVAASEFLAVVKPSGALYA
                     FPQIRADRIEAFDDEAFALRLLEEESVLVVPGSSFNVPESRHLRLTLLPEPAQLREVF
                     VRMERVLARLAEEQPRRAVA"
     gene            1477..2082
                     /locus_tag="VFM52_08030"
     CDS             1477..2082
                     /locus_tag="VFM52_08030"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014508921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SGNH/GDSL hydrolase family protein"
                     /protein_id="HET8765154.1"
                     /translation="MSLRYLALGDSYTIGEGVAVGARWPVQLAVALRQHGTPVDPPTV
                     LATTGWTTGELAQAMDAAHFAPPYDLVSLLIGVNNQYRGLALDGYRAEFAALLRRAVT
                     LAGARPARVVVLSIPDWGVTRFAAASGRDVPRIAAEIDAFNTAARDTVITAGARWVDI
                     TGISRDAATALADDGLHPSAAQYARWAQCALPVALAALAGA"
     gene            2147..3049
                     /gene="grxD"
                     /locus_tag="VFM52_08035"
     CDS             2147..3049
                     /gene="grxD"
                     /locus_tag="VFM52_08035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007509780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Grx4 family monothiol glutaredoxin"
                     /protein_id="HET8765155.1"
                     /translation="MSLDSATRERIETILQNHPVVLFMKGDRQQPMCGFSAAATNILN
                     ELLPEYHTVNVLEDAEIRDGIKEYGNWPTIPQLYVDGELVGGADIIRQMYGSGELHTL
                     FKLPAPDRTPPEITISDAAAKAIRDSMEHADGLALHLEIGRDQSAGFQLAPAGDSDIV
                     ASSNGLEIHFDPDSAQRAKGIVIDWVSTEQGEGLSLSFPGSGKIRDLDVAALKQRLEK
                     GDITLVDVRSAAAREQLPALPQARILEDEGDGVIGALAKDTELAFICMRGVSSRTVAE
                     RYIAHGFSHVYSITGGMEAWDAAQ"
BASE COUNT          529 a         1274 c         1150 g          495 t
ORIGIN      
        1 ccacgcgggc cagtggccgg accggcaggg cgtcgccacg ccagccaatg cgccgcagtc
       61 gttcgagggt ttcggcgtcg ctcatgggag gttcccagcg gattcccgca ttatgccttg
      121 ccccgaaatt gcccgacagc gggccgctgc gcgactcgcg ctgcaccgca caacgctgct
      181 agcatcccgc ctcgtactgg cgctgatgcc ggtgtccgag gatgttcgcg gtggcttcga
      241 tcaaacccag ctcccacctg gccgacgtgc gctacgagat ccgcggcgcc ctcacccgtc
      301 gcgcgcgcga actcgaagcc gccggccacg acatcatcaa gctcaacatc ggcaaccccg
      361 cgcgttacgg gttcgagacc ccggcgcacc tgcgcgaggc gattgccgcg cacctgcacg
      421 acagcgaggc gtattgccac gagcagggcc tggacgtggc gcgcgaggcg attgccgagc
      481 agcagcgcgc acgcggcgca cggcatgtgg cggtcgaacg catcttcatc ggcaacggcg
      541 tgagcgagct gatcgacctc agcctgcgcg ccctgctgca gcccggcgac gaagtgctgc
      601 tgccgagccc cgactacccg ctgtggagcg ccgccaccat cctgaacggc ggcgcgccgc
      661 gctactaccc gtgcctggcg gaaaacggcc acctgccgga tgccgacgag atcgaggcgc
      721 tggtgacgcc gcgcacgcgc gcgctggtgc tgatcaaccc gaacaacccg accggcgcga
      781 actacccgcg ggcgttgctg gaacgcatcg tcgcggtcgc cgcgcggcac gacctgctgc
      841 tgctggtcga cgagatctac gacgaggtgc tgtacgacgg tgccgtgttc cagccgctgg
      901 ccgaggtcgc cggcgacctg ccgtgcgtca gcttcggcgg gctgtccaag gtgtaccgcg
      961 cgtgcggcta tcgtgttggc tggctgagcc tgtccggcaa cccgcaacgc acggccgatt
     1021 accgcgatgc cctgcaattg ctggccgcgc tgcgcctgtg cgccaacgtc actgcgcaat
     1081 ggacgatccc cgtcgcgctg cacggcccgg ccacgatccg cgcactcacc gcgcccggtg
     1141 gccgcctgca cgaagcgcgc cgcgccgtgg ccgaaggcgt cgccgccagc gagttcctgg
     1201 cggtggtgaa accatccggc gcgctgtacg cgttcccgca gatccgcgcc gaccggatcg
     1261 aggcgttcga cgacgaagcc tttgcgctgc gcctgctcga agaggaatcg gtactggtgg
     1321 tgccgggttc gagcttcaac gtgccggaaa gccgccacct gcggctgacc ctgctgcccg
     1381 agccggcgca gttgcgcgag gtgttcgtgc gcatggaacg cgtgctggcg cggctcgccg
     1441 aggagcaacc gcgccgcgcc gtcgcttgag cgcggcatga gcctgcgcta cctcgccctc
     1501 ggcgattcct acaccatcgg cgaaggcgtc gccgtcggcg cgcgctggcc ggtgcagttg
     1561 gccgtggcgt tgcgccagca cggcaccccc gtggatccgc cgacagtgct agccaccacc
     1621 ggctggacca ccggcgagct ggcgcaggcg atggacgcgg cacacttcgc gccgccgtac
     1681 gacctcgtca gcctgctgat cggcgtgaac aaccagtatc gcggcctggc gctggacggc
     1741 taccgtgccg aattcgcggc gctgctgcgg cgcgcggtca cgctggccgg tgcgcgcccc
     1801 gcgcgcgtcg tcgtgctgtc cattccggac tggggcgtca cccgcttcgc cgccgcgagc
     1861 gggcgcgacg tgccgcgcat cgccgccgag atcgacgcct tcaataccgc cgcgcgggac
     1921 accgtcatca ccgccggcgc gcgctgggtc gacatcaccg gcatctcgcg cgatgccgcc
     1981 acggcgcttg ccgacgacgg cctgcacccg tctgccgcac aatatgcgcg atgggcgcaa
     2041 tgcgccctgc cggtggcact cgcggcgctc gccggcgctt gacccgcatc tgccgggccg
     2101 gccgcgcatc ggcggtatca tcaccagtcc ccagccggag ccatccatgt cgctagattc
     2161 cgctactcgc gaacgtatcg agaccatcct ccagaaccac cccgtggtgc tgttcatgaa
     2221 gggcgaccgc cagcagccga tgtgcgggtt ctcggctgcg gccaccaaca tcctcaacga
     2281 gctgctgccg gaataccaca cggtcaacgt gctggaagac gcggagatcc gcgacggcat
     2341 caaggagtac ggcaactggc cgacgatccc gcagctctac gtcgatggcg agctggtcgg
     2401 cggcgccgac atcatccgcc agatgtacgg cagcggcgag ctgcacacgc tgttcaagct
     2461 gccggcgccg gaccgcaccc caccggaaat caccatcagc gacgcggccg ccaaggcgat
     2521 ccgtgacagc atggaacacg ccgacggcct cgcgctgcac ctggagatcg gccgcgacca
     2581 gagcgccggg ttccagcttg cgcccgccgg cgacagcgac attgtcgcca gctccaacgg
     2641 tcttgaaatc cacttcgacc cggacagcgc gcagcgcgcg aaaggcatcg ttatcgactg
     2701 ggtgtcgacc gaacagggcg aggggttgag cctgagcttc cccggctccg gcaagatccg
     2761 tgacctcgac gtcgccgcgc tcaagcagcg cctggagaag ggcgacatca ccctggtcga
     2821 cgtgcgctcc gccgccgccc gcgagcagct gcccgcgctg ccgcaggcgc gcatcctcga
     2881 ggatgaaggc gacggcgtga tcggcgcgct ggcgaaggac accgagcttg ccttcatctg
     2941 catgcgcggc gtctccagcc gcacggtcgc cgagcgctac atcgcgcacg gcttcagcca
     3001 cgtctacagc atcaccggcg gcatggaggc gtgggacgcc gcgcagtaac gcgcgcggca
     3061 ggacgttgcc gacacggccc gccaccgcag gccgtgtgcg tttccgtcag tgccattcag
     3121 cgcatcgacg ccgcaccggc gcccagccgg tgacggtcgg cgccagggcg aagtcgccgc
     3181 ggtacgccgt cgcatgcggc tggaagtgac actcccaggc cgccggtcat acgcaagcac
     3241 cgcgaacgca ttgaacccgc tgttgtcgtc ggcgtggtag ccgcgcccct cgactggctt
     3301 gatgccgccg tcgcgcagcg ggccgatgcg cggtccgggt gatcacgtgc agcttgtcct
     3361 tcaggccggt cacctgctgc gccggcgccg gcaagcccgc catcgccgcg accggccacc
     3421 acggccgagg tttcaccgtc gtcactcg
//
LOCUS       DASSVL010000458         2548 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_575733, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000458 DASSVL010000000
VERSION     DASSVL010000458.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2548)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2548)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2548
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_575733"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..326)
                     /locus_tag="VFM52_08040"
     CDS             complement(<1..326)
                     /locus_tag="VFM52_08040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8765156.1"
                     /translation="MMNLSGLAYVVAQTTDVAHWKTYAEQVLGMMTAPAPGGGLYVRM
                     DERQFRFLVEPGERNRFVASGWEVIDQPAFEQALETLRAAKVVFKLEDAAFCAQRRVQ
                     QAASFN"
     gene            520..789
                     /locus_tag="VFM52_08045"
     CDS             520..789
                     /locus_tag="VFM52_08045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8765157.1"
                     /translation="MDTTTTSGLGELLRCASELVDQGADEQYRARGLGCRARYTPVLR
                     AIAALAAGIGYPLRGALEAAAAALERRGCAARLHAAAPPEAADES"
     gene            779..1537
                     /locus_tag="VFM52_08050"
     CDS             779..1537
                     /locus_tag="VFM52_08050"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015448625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HET8765158.1"
                     /translation="MSPDAHAPRNWFDAGGAAYAQFRPDYPPELAAFLASIAPGTALA
                     VDVGCGNGQLTTQLAAHFDAVLGADPSADQITNAAAHPHVRYVCAPAEQLPIADHVAQ
                     LVTAAQAAHWFDLPRFYREVRRIAAPSAVLALVSYGVPQLDAELDPRFSQFYWQDIGP
                     YWPASRRLVESGYADLAFPFAELAPPPIEIRKHWALDALLGYLSTWSAVRHAREAGRA
                     DLLRDFARDLTALWGDPTREREIHWPIHMRLGQP"
     gene            1591..1845
                     /locus_tag="VFM52_08055"
     CDS             1591..1845
                     /locus_tag="VFM52_08055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8765159.1"
                     /translation="MTVEPRHTVPQVADWPGFADMPAVPATAMMVEARVELVEIQGKA
                     LLFKVECRDAAGLIGAGMHRRAIVDLRRFEERLAAKAAAL"
     gene            complement(1849..>2548)
                     /locus_tag="VFM52_08060"
     CDS             complement(1849..>2548)
                     /locus_tag="VFM52_08060"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HET8765160.1"
                     /translation="AAIEARGGVGVPVVCDHADDAQVAALFARVRAEHGRLDILVNNV
                     TAIPDALVAHGGFWEKPLAMQAMLDVGLRSSYVASWHAAPLLIANGAGLIVNTSSFGA
                     RCYMHGPAYGAGKAAVDKMAHDMAHELRPHGVAAVSLWMGLLRTERTLAVLGAGEVSY
                     AGLLERSESPEFPGRVIDALACDPNLMARSGQVLIGAELALELGVVDIDGKQPPSFRD
                     ALGAPTGFSRAVVE"
BASE COUNT          366 a          953 c          861 g          368 t
ORIGIN      
        1 tcgttgaagc tggccgcctg ctgcacccgg cgctgcgcgc agaacgcggc gtcttccagc
       61 ttgaagacga ccttcgcggc acgcagcgtt tccagcgcct gctcgaatgc gggctggtcg
      121 atcacttccc agcccgatgc cacaaagcgg ttgcgctcgc ccggctcgac gaggaaccgg
      181 aactggcgct cgtccatgcg cacgtacagg ccgccgcccg gcgccggcgc cgtcatcatg
      241 cccagcacct gttcggcgta ggtcttccag tgcgcgacgt cggtggtttg cgccaccacg
      301 taggcgagcc cgctgaggtt catcatggcc atgcatctcc cgggcagacc gccctgtcgc
      361 tgtggcctcg attctgcggt tgcggctgtg caccagcatc gtccgataag actaacggtc
      421 gcggtgcttc ggggcggtgc agggcgtgaa cgacaagccc tgcgggaggc ggcgccacgc
      481 ggcggctcca ccccatcagc gctaatgtag acggccagca tggacaccac gacgacatcc
      541 ggcctgggcg aactgctgcg ctgcgcgagc gagctggtgg accagggcgc cgacgagcaa
      601 taccgggcac gcgggctggg ctgtcgtgcc cgctacaccc cggtgctgcg ggcgatcgcc
      661 gcgttggcgg ccgggatcgg ctacccgctg cgtggcgcgc tggaagccgc ggccgcggcg
      721 ctggaacgcc ggggttgcgc cgcccgcctg catgcggcgg caccaccgga ggctgccgat
      781 gagtcctgac gcccacgccc cgcgcaactg gttcgacgcc ggcggcgccg cctacgcgca
      841 atttcgcccg gattacccgc cggaactggc tgcgtttctc gcctccatcg cgcccggcac
      901 ggcgctggcg gtcgacgtgg gctgtggcaa cggccagctg accacgcagc ttgccgcgca
      961 cttcgacgcc gtacttggcg ccgaccccag cgccgaccag atcacgaacg ccgcggccca
     1021 tccgcacgtg cgctacgtgt gcgcgccggc cgagcagttg ccgattgccg atcacgttgc
     1081 ccagctcgtc accgccgcgc aggccgcgca ctggttcgac ctgccgcgct tctaccgcga
     1141 ggtgcgtcgc atcgcggcac ccagcgccgt gctggcgctg gtcagctacg gcgtaccgca
     1201 actggatgcc gaactcgatc cgcgcttcag ccagttctac tggcaggaca tcggcccgta
     1261 ctggccagcc agccgccggc tggtggaaag cggctatgcc gacctcgcgt tcccgttcgc
     1321 ggagctggcg ccgccgccga tcgagatccg caagcactgg gcgctggacg cgctgctggg
     1381 ttatctctcc acctggtccg ccgtgcgcca cgcgcgcgaa gccgggcgcg cggacctgct
     1441 gcgggacttc gcccgcgacc tcaccgccct gtggggcgac ccgacgcgcg agcgcgagat
     1501 ccactggccc atccacatgc gactggggca accatgatcg atacgacttc ccgcccggcc
     1561 ctcgccgccg gcctccggca cactgcacgc atgaccgtcg agccgcgcca caccgtgccg
     1621 caggtggccg actggccggg cttcgccgac atgccggcgg tgcctgccac cgcgatgatg
     1681 gtggaagccc gcgtcgagct ggtcgaaatc cagggcaagg cgctgctgtt caaggtcgaa
     1741 tgccgcgacg cggccgggct gatcggcgcc ggcatgcacc gccgcgcgat cgtcgacctg
     1801 cgccgtttcg aggagcgcct ggccgccaag gccgcggcgc tttgaccatc actcgacgac
     1861 ggcgcggctg aacccggtcg gcgcgcccag cgcatcgcgg aaggacggcg gctgcttgcc
     1921 gtcgatgtcg accacgccga gttccagcgc cagttcggcg ccgatcagca cctggccact
     1981 gcgcgccatc aggttgggat cgcacgccag ggcatcgatc acgcggccgg ggaattccgg
     2041 gctttccgag cgctccagga ggcccgcgta ggacacctcg ccggcgccga gcacggcgag
     2101 cgtgcgctcg gtgcgcagca ggcccatcca cagcgacacc gccgccacgc cgtgcgggcg
     2161 cagctcgtgc gccatgtcgt gcgccatttt gtccaccgcg gccttgccgg caccgtacgc
     2221 cggcccgtgc atgtagcagc gcgcgccaaa ggacgaggtg ttgacgatca gccccgcgcc
     2281 attggcgatc agcaatgggg cggcgtgcca gctcgccacg tagctggaac gcaggccgac
     2341 gtcgagcatg gcctgcatcg ccagcggctt ctcccagaac ccgccgtgcg ccaccagcgc
     2401 atcggggatc gcggtgacgt tgttgaccag gatgtcgagc cggccatgtt ccgcccgcac
     2461 ccgcgcaaac agcgcggcca cctgggcatc gtcggcgtgg tcgcacacca ccggcacacc
     2521 gacgccgccg cgcgcttcga tcgcggcc
//
LOCUS       DASSVL010000459         3234 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_730868, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000459 DASSVL010000000
VERSION     DASSVL010000459.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3234)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3234)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3234
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_730868"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..844
                     /locus_tag="VFM52_08065"
     CDS             <1..844
                     /locus_tag="VFM52_08065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008215125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HET8765161.1"
                     /translation="TTAQSAKAALAAADAALSAARLNLDFTDVRAPIDGRVSNARVTP
                     GNLVTSNDVLTSVVSVNPVYAYFDVDEHTWLKLDHLRAAARGDGRTPRVAVAMGLSDE
                     QGYPHEGRLDFVDNQLHTDSGTMRLRAVFDNTKGLFTPGLYAHVRVQMGQPKARVLVD
                     DRAVGTDLANQFVYVVDAEHKVQYRKVSTGPLFHGLRVIDSGLKPGDEVVVNGLQRVR
                     PGVAVDADQVAMDYRLDAEDKALVEAAVEQQPENRHIAQTDQDTEKTPTASLSPRERV
                     PAGG"
     gene            1083..>3234
                     /locus_tag="VFM52_08070"
     CDS             1083..>3234
                     /locus_tag="VFM52_08070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015446396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HET8765162.1"
                     /translation="MKNIAQFFVDRPIMAAVLSLLFLITGGIAVFQLPISEYPEVVPP
                     TVVVRATYPGANPKVIAETVATPLEEQINGVEGMLYTSSQATSDGVMTLTVTFALGTN
                     LNDAQVEVQNRVAQALPRLPEEVQRLGVTTKKSSPDLTMVVHLTSPNQRYNMLYLSNY
                     ARLHVKDVLSRLEGVGDVQIFGAGEYSMRVWLNPQKLAQRGLTTGDVVKAIREQNVQV
                     AAGSLNAPPVRSDADFQLNINTQGRLSTAEDFRNIIVRTDRDGGVVHLGDVARVELGS
                     DQYALRSLLDNQPAVALPIFARPGSNAIQISNEVRATMAQLKQAFPQGIDYHIVYDPT
                     VFVRDSIKAVAHTLLEAILLVVLVVILFLQTWRASVIPLIAVPVSLIGTFAVMYLVGF
                     SLNALSLFGMVLAIGIVVDDAIVVVENVERHIELGETPKEATRKAMREVTGPIVATAL
                     VLCAVFIPTAFISGLTGEFYRQFALTIAISTVISAFNSLTLSPALAAILLLPHGAPKD
                     RLTRAIDRLFGWLFRPFNRVFQRGAERYVAGTRRMQGKGGAALVVYAGLIALTAFGFW
                     HVPTGFVPTQDKQYLVSFAQLPDAASLDRTEDVIKQMSAIALKQPGVQSAVAFPGLSV
                     NGFTNSTNAGIVFVTLKPFEDRRSADLSAGAIAGALNAKFAAIQDAYIAVFPPPVMGL
                     GTIGGFRLQVEDRGQVGFDELYQQTQNLIAASRKD"
BASE COUNT          562 a         1082 c         1077 g          513 t
ORIGIN      
        1 caccacggcg cagagcgcca aggccgccct ggcggccgcc gacgccgcgc tttcggcggc
       61 gcggctcaac ctcgacttca ccgacgtgcg cgcgccgatc gatggccgcg tcagcaatgc
      121 gcgggtgacg cccggcaatc ttgtcaccag caacgacgtg ctgaccagcg tggtgtcggt
      181 gaatccggtg tacgcgtatt tcgacgtgga cgaacacacc tggttgaagc tggaccatct
      241 gcgcgcggcg gcacgcggtg acggtcgcac gccacgtgtc gcagtcgcga tgggcttgtc
      301 ggacgaacag ggttatccgc acgaagggcg gctggatttc gtcgacaacc agttgcacac
      361 cgactccggc acgatgcgcc tgcgcgcggt gttcgacaac acgaaaggcc tgttcacgcc
      421 gggcctgtac gcgcacgtgc gcgtgcagat gggccagccg aaggcgcgcg tgctggtcga
      481 cgatcgcgcg gtcggcaccg acctcgccaa ccagttcgtg tacgtggtgg acgccgagca
      541 caaggtgcag taccgcaagg tcagcacagg gccgttgttc catggcctgc gcgtgatcga
      601 cagcggcttg aaacccggcg atgaagtcgt ggtgaacggg ctgcagcgcg tgcgccccgg
      661 cgtcgccgtg gatgccgacc aggtggcgat ggattaccgc ctcgacgccg aagacaaggc
      721 gttggtcgaa gccgctgtag agcagcagcc tgaaaacagg catatcgcac aaaccgacca
      781 ggacaccgaa aagacaccta ccgcgtccct ctcccctcgg gagagggtgc cggcaggcgg
      841 gtgagggtac ggccagcgcg ttgcgccgca atttcgtcga accctcatcc gcccttcggg
      901 caccttctcc cggcgggaga agggaagcct acccggaggg gccggggtat tgcgctgcag
      961 tttctcgaac cctcattcgc ccgtcgggca cattctcccg aagggagaag ggagagccct
     1021 ttggcacctt ctccagacgg agaagaaaac agcctcgcac ggcctgaaga ccaggaaaac
     1081 ccatgaagaa cattgcccaa ttttttgtcg accggccgat catggccgcg gtgctgtcgc
     1141 tgctgttcct gatcacgggc ggcatcgcgg tgttccagtt gccgatcagc gagtatccgg
     1201 aagtggtgcc gcccacggtg gtggtgcgcg cgacctatcc cggcgccaat cccaaggtga
     1261 tcgccgaaac cgtcgcgacc ccgctggaag aacagatcaa cggcgtcgag ggcatgctgt
     1321 acacgtcctc gcaggccacc agcgacggcg tgatgacgct gacggtgacc ttcgcgctcg
     1381 gcaccaatct caacgacgcg caggtggaag tccagaaccg cgtagcgcag gcgttgccgc
     1441 gcctgcccga ggaagtgcag cggctcggcg tcaccaccaa gaagagctcg cccgacctca
     1501 cgatggtcgt gcacctcacc tcgccgaacc agcgctacaa catgctgtac ctctccaact
     1561 acgcgcgcct gcacgtgaag gacgtgctga gccgtctgga aggcgtgggc gacgtgcaga
     1621 tcttcggtgc cggcgaatac tcgatgcggg tgtggctgaa cccgcagaag ctggcccagc
     1681 gcgggctcac caccggcgac gtggtgaagg cgatccgcga acagaacgtg caggtggcgg
     1741 cgggctcgct gaacgcgccg ccggtgcgga gcgacgccga cttccagctc aacatcaaca
     1801 cccagggccg gctgagcacg gccgaggatt tccgcaacat catcgtgcgc accgaccgcg
     1861 acggcggcgt ggtgcacctg ggcgacgtgg cgcgcgtgga gctcggctcg gaccagtacg
     1921 cgctgcgcag cctgctggat aaccagccgg cggtggcgct gccgatcttc gcgcggcccg
     1981 gctccaacgc catccagatt tccaacgaag tgcgcgccac catggcgcag ctgaagcagg
     2041 cgttcccgca gggcatcgac taccacatcg tctacgaccc cacagtgttc gtgcgcgact
     2101 cgatcaaagc cgtggcgcac acgctgctgg aagcgatcct gctggtggtg ctggtggtga
     2161 tcctgttcct gcagacctgg cgcgcctcgg tgatcccgtt gatcgcggtg ccggtatcgc
     2221 tgatcggcac cttcgcggtg atgtacctgg tgggcttctc gctcaacgca ttgagcctgt
     2281 tcggcatggt gctggcgatc ggcatcgtgg tggacgacgc gatcgtggtg gtggagaacg
     2341 tggagcgcca catcgaactg ggcgagacac cgaaggaggc cacacgcaag gcgatgcgcg
     2401 aggtcaccgg gccgatcgtg gcgaccgccc tggtgctgtg cgcggtgttt atccccaccg
     2461 ccttcatcag cggcctcacc ggcgagttct accgccagtt cgcgctgacc atcgcgatct
     2521 ccacggtgat ctcggcgttc aactcgctga ccctgagccc ggcgctggca gcgatcctgc
     2581 tgctgccgca cggcgcgccg aaggaccgcc tcacccgcgc catcgaccgc ctgttcggct
     2641 ggctgttccg cccgttcaac cgcgtgttcc agcgtggtgc ggaacgctac gtggccggca
     2701 cgcgccgcat gcagggcaag ggcggcgccg cgctggtggt gtacgcgggc ctgatcgcac
     2761 tcaccgcgtt cggcttctgg cacgtgccca ccggcttcgt gccgacccag gacaagcagt
     2821 acctggtgtc gttcgcccag ctgcccgacg ccgcctcgct ggaccgcacc gaggacgtga
     2881 tcaagcagat gagcgcgatc gcgctgaagc agcccggcgt gcagagcgcg gtggcgttcc
     2941 ccggcctgtc ggtgaacggc ttcaccaact cgaccaacgc cggcatcgtg ttcgtgacgc
     3001 tgaagccgtt cgaggacagg cgcagcgcgg acctctccgc cggcgcgatc gccggcgcgc
     3061 tgaacgcgaa gttcgccgcc atccaggacg cctacatcgc ggtgttcccg ccgccggtga
     3121 tgggcctggg cacgatcggc ggcttccgcc tgcaggtcga ggaccgtggc caggtcggct
     3181 tcgacgagct gtaccagcag acgcagaacc tgatcgcggc gagccgcaag gacc
//
LOCUS       DASSVL010000460         3875 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_24554, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000460 DASSVL010000000
VERSION     DASSVL010000460.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3875)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3875)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3875
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_24554"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1651
                     /gene="acpA"
                     /locus_tag="VFM52_08075"
     CDS             <1..1651
                     /gene="acpA"
                     /locus_tag="VFM52_08075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019464311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="acid phosphatase"
                     /protein_id="HET8765163.1"
                     /translation="LTDPARRRLLGGLAAAGATLAVGAARAQPPAPAAAKPLAGAAFD
                     AALRERIRHIVVIYAENRSFNNLFAEFPGLAEPLSAVPPERYRQRDRDGSVLATLPPI
                     WRGLVPRQQVVNHRSFEIGENAIANLPNAPFALATPDGRPLPHGVVTRDLIHAFYANQ
                     LQINGGKNDGFVAWGDSGALVMGHYADSATNLRLWNLAREYTLCDRFFMGAFGGSFLN
                     HQYLVAAQPPYYPHADASPAKLRIAQVLGNDPAGIQRRLSPTSPASAMQGRPEFAGAS
                     SLTPDFWAVNTMGPPYAPAFTTDPANPAYAKKDDYGTLPPQVHATIGDRLSAKGIGWA
                     WYAGAWQLALDGRGDDGLSKEFPPSPNFQVHHQPFNYYRAFAPGTPARAAHLRDGGYG
                     ETARTNRLLADIAAGTLPAVTFYKPQGDLNMHAGYSDVDAGDRHVTQVVDAIQASALW
                     PHTLIVITVDENGGWWDHIAPPKGDRWGPGTRIPALVVSPYAKRSHVEHTTYDTGSIQ
                     RLINRRFGLAPLPGIVLRDQAMRAATGYAPGDLTETLQFDA"
     gene            1710..2663
                     /gene="pip"
                     /locus_tag="VFM52_08080"
     CDS             1710..2663
                     /gene="pip"
                     /locus_tag="VFM52_08080"
                     /EC_number="3.4.11.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007513717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004177 - aminopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0030163 - protein catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl aminopeptidase"
                     /protein_id="HET8765164.1"
                     /translation="MHELYPDIEPFKTWTLPVDARHTLHIEECGNPGAVPVVFLHGGP
                     GAGITPSYRRYFHPERWHVVLFDQRGAGQSTPFADLVDNTTAHLVADIEAIREELGLE
                     RWVVFGGSWGSTLALAYAEAHPERVLGLVLRGIFLARDEELRWFNEVDGGARHIFPER
                     WARYRDFIPAAERGNMIEAYWRRLDSADEAVRLAAAQAWSAYEGGSTTLVHDPDAPGD
                     FDEPHKAVSLARLEAHYFRHRMFLEPDQLLRDAHRLRRIPTTIVHGRYDIICPVSTAL
                     DLAAALPQADLHIVLAGHSAADPAIVDQLVAATDLLAERYC"
     gene            complement(2654..>3875)
                     /locus_tag="VFM52_08085"
     CDS             complement(2654..>3875)
                     /locus_tag="VFM52_08085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007513711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HET8765165.1"
                     /translation="LDNFKTINDGLGHLVGDRLLQAVADRLRHLAPDEAMLARLGGDE
                     FVVLLGPLAGHADAVYARAQELAAALIARLAEPTVLDGRVLAVGASAGIALFPDGERD
                     VDDLLRRADIALYDAKTAGRGMARAFEPAMQQAADTRLLLERGLRTALEEDNLQRQFA
                     LHFQPQVTLDGKLQGAEALLRWTHPQSGPILPEVFVPLAEDTGLIHALGAWVIGEACA
                     RLKAWDRDGVPFVGRLAINVSAWQLAAPLFVERVVAQVQAHGLSPSRLTLELTESALL
                     RDADGALATLQRLVDAGFTLALDDFGTGYSSLRYLQRLPLKLIKIDRAFVRTLAPREP
                     SPLAAFIVDVAHRLGMATVAEGVETLAQRQVLERLGCDGLQGYLVSRPLDDAAFRHWL
                     SSRQPVPACGDSQQ"
BASE COUNT          603 a         1478 c         1279 g          515 t
ORIGIN      
        1 cctcaccgac cccgcgcgcc gccgtctgct gggagggctg gccgctgccg gtgcgacgct
       61 cgccgtcggc gccgcacgcg cacaaccgcc ggcgccggca gccgcgaagc cgctggccgg
      121 cgccgcgttc gacgccgcac tgcgcgaacg gatccggcac atcgtggtga tctacgccga
      181 gaaccgcagc ttcaacaacc tgttcgcgga gttccccggg ctggccgagc cgctgtccgc
      241 ggtgccgccg gaacgctatc ggcaacgcga ccgcgacggc agcgtgctgg cgacgttgcc
      301 gccgatctgg cgcggcctgg tgccgcgcca gcaggtggtc aaccaccgca gcttcgagat
      361 cggcgagaac gcgatcgcca acctgccgaa tgcgccgttt gcgctggcca cgccggacgg
      421 ccggccgctg ccgcacggcg tcgtcacccg cgacctgatc cacgcgttct acgccaacca
      481 gctgcagatc aacggcggca agaacgacgg cttcgtcgcc tggggcgaca gcggtgcgct
      541 ggtgatgggc cactacgccg acagcgcgac caacctgcgg ctgtggaacc tcgcgcgcga
      601 gtacacgctg tgcgaccgct tcttcatggg cgcattcggc ggctcgttcc tgaaccacca
      661 gtacctggtc gccgcgcagc cgccgtacta cccgcatgcc gacgccagtc cggcgaaact
      721 gcgcatcgcg caggtgctgg gcaacgaccc ggccggtatc cagcgcaggc tgtcgcccac
      781 gtcgccggcc agcgcgatgc aggggcgccc ggagtttgcc ggcgccagct cgctcacgcc
      841 ggatttctgg gcggtcaaca cgatgggccc accgtacgcg ccggcgttca ccaccgaccc
      901 ggcgaatccc gcgtatgcga agaaggacga ctacggcacg ctgccgccgc aggtgcacgc
      961 gaccatcggc gaccggcttt cggccaaggg catcggctgg gcgtggtacg ccggcgcgtg
     1021 gcaactcgcg ctggacggcc gcggcgacga cggcctgagc aaggagtttc caccgagccc
     1081 gaatttccag gtgcatcacc agccgttcaa ttactaccgg gcgtttgccc cgggcacgcc
     1141 ggcgcgcgcc gcccacctgc gcgacggcgg ctacggcgag accgcgcgca ccaaccgcct
     1201 gctcgccgac atcgccgccg gcacgctgcc cgcggtcacg ttctacaagc cgcagggcga
     1261 cctcaacatg cacgccggct attccgacgt ggacgccggc gaccgccacg tcacccaggt
     1321 cgtcgacgcg atccaggcca gcgcgctgtg gccgcacacg ctgatcgtca tcaccgtcga
     1381 cgagaacggc ggctggtggg accacatcgc gccgcccaag ggcgaccgct gggggccggg
     1441 tacgcgcatt ccggcgctgg tggtatctcc gtacgcgaag cgcagccacg tcgagcacac
     1501 cacctacgac accggctcga tccagcgcct gatcaaccgc cgcttcggcc tcgcccccct
     1561 gcccggcatc gtgctgcgcg accaggcaat gcgcgcggcc accggctacg cgccgggcga
     1621 cctcaccgag acgctgcaat tcgacgcctg atatcccgtc acctggtgtc gggatgcgtc
     1681 ccgaccggca acacccaagc gaacacccca tgcacgaact gtatcccgac atcgaaccct
     1741 tcaagacctg gacgctcccc gtcgacgcgc gacacaccct gcacatcgag gagtgcggca
     1801 accccggcgc cgtgccggtc gtgttcctgc acggcggacc gggcgccggc atcacgccga
     1861 gctaccgccg ctacttccac ccggaacgct ggcacgtggt gctgttcgac cagcgcggcg
     1921 cagggcaatc cacgccgttt gccgacctcg tcgacaacac caccgcgcat ctcgtcgccg
     1981 acatcgaggc gatccgcgaa gaactaggcc tcgaacgctg ggtggtattc ggcggttcgt
     2041 ggggctcgac cctcgcgctg gcctatgccg aagcccatcc cgagcgcgtg ctcggcctcg
     2101 tgctgcgcgg catcttcctc gcccgcgacg aggaactgcg ctggttcaac gaggtggacg
     2161 gcggcgcacg ccacatcttc ccggaacgct gggcgcgcta tcgcgatttc atcccggcgg
     2221 ccgagcgcgg caacatgatc gaggcgtact ggcggcgcct ggacagcgcc gacgaagccg
     2281 tgcggctcgc cgccgcgcag gcatggagcg cctatgaagg tggcagcacg acgctggtgc
     2341 acgaccccga cgcgccgggc gacttcgacg agccgcacaa ggcggtgagc ctcgcgcggc
     2401 tcgaggcgca ctatttccgc caccgcatgt tcctcgaacc cgaccagctg ctgcgcgacg
     2461 cgcaccgcct gcgccggatt ccgaccacca tcgtgcacgg ccgctacgac atcatttgcc
     2521 cggtgagcac ggcgctcgac ctcgccgccg ccctgccgca ggccgacctg cacatcgtgc
     2581 tggccgggca cagcgcggcc gatcccgcga tcgtcgacca gctggtggcc gccaccgatc
     2641 tcctcgccga gcgctactgc tgagagtccc cgcacgccgg cacgggttgc cggctggaca
     2701 gccagtggcg gaacgcggca tcgtcgagcg gacggctgac gaggtagccc tgcaggccgt
     2761 cacagcccag gcgttcgagt acctgccgct gggccagggt ttccactccc tcggccaccg
     2821 tcgccatgcc gagtcggtgc gccacgtcca cgatgaacgc ggccagcggg ctgggctccc
     2881 tcggcgccag cgtgcgcacg aacgcgcggt cgatcttgat cagcttgagc ggcaggcgct
     2941 gcaggtagcg cagcgacgag tagccggtgc cgaagtcgtc cagcgccagc gtgaacccgg
     3001 cgtcgacgag ccgctgcagg gtggcaagcg cgccatcggc atcgcgcagc aaggcgcttt
     3061 cggtgagctc cagcgtgagc cgcgacggcg acaagccatg ggcctgcacc tgcgcgacca
     3121 cgcgctcgac gaaaagcggc gccgccagtt gccacgcgct gacgttgatt gccaggcggc
     3181 caacgaacgg cacgccatcg cggtcccatg ccttgagccg cgcgcaggcc tcgccgatca
     3241 cccacgcccc cagcgcgtgg atcaggccgg tgtcctcggc cagcgggaca aacacctcgg
     3301 gcaggatcgg cccgctctgc ggatgcgtcc agcgcagcag cgcctccgcc ccctgcagct
     3361 tgccgtccag cgtcacctgc ggctggaaat gcagcgcgaa ctggcgttgc aggttgtcct
     3421 cctccagggc cgtgcgcagc ccgcgttcga gcagcaggcg ggtatcggcc gcctgctgca
     3481 tcgccggctc gaaagcgcgc gccatgccgc gccccgcggt cttggcgtcg tacagggcaa
     3541 tgtcggcccg ccgcagcagg tcgtcgacgt cacgctcgcc gtccggaaac aacgcgatgc
     3601 cggcactggc gccgaccgcc agcacgcggc cgtccagcac cgtcggctcg gccagccgcg
     3661 cgatcagcgc cgcggccagc tcctgcgccc gggcgtacac cgcatcggcg tggcccgcga
     3721 gcgggccgag cagcaccacg aactcatcgc cgcccagccg cgccagcatc gcctcgtccg
     3781 gcgccagatg gcgcagccgg tcggcaaccg cctgcagcag gcggtcgccg accaggtgcc
     3841 cgaggccgtc gttgatggtc ttgaagttgt cgagg
//
LOCUS       DASSVL010000461         3707 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_843637, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000461 DASSVL010000000
VERSION     DASSVL010000461.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3707)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3707)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3707
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_843637"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1040)
                     /locus_tag="VFM52_08090"
     CDS             complement(<1..1040)
                     /locus_tag="VFM52_08090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015449007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HET8765166.1"
                     /translation="MHPESCPSCRPAASAAALPLLAADDLQRTVAWRAGHAVSAGTFL
                     AHVAQVAAALPPATAAVNLCEDRYAFLVAFCALVVRGQVNLLPPSRAPQMVAEVMATH
                     PGCYALGEQARATALRGYHRLPPLADEPFAGAVPMVPADQLALIAYTSGSTGTPRPNA
                     KRWGALHAATRGTRAMLARVAGNRVNVVATVPPQHIYGIETSVLLPLLGTIAVHAGKP
                     FFPADIAAALATVPAPRVLVTTPVHLRALVAANLALPPLAAMLSATAPMPPELAGDAE
                     RAFGAPLVEVFGSTETCAIASRRLTADTDWALYPGVALHPRPDGTEVSAPQLDAPVVL
                     ADLMEVDAAAHR"
     gene            complement(1108..1680)
                     /locus_tag="VFM52_08095"
     CDS             complement(1108..1680)
                     /locus_tag="VFM52_08095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015449008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003725 - double-stranded RNA binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Sua5/YciO/YrdC/YwlC family protein"
                     /protein_id="HET8765167.1"
                     /translation="MRRDFTLATLADAAALLRDGQVLAYPTEGVYGLGCDPANRAAFE
                     RIFALKQRPATQGVLLIAADFAQVERYIDFTKVPAAVLAQVKASWPGPHTWIFPRSAD
                     LPAWVAGAHPGIALRVTAHAPAAALCRAYGGALVSTSANPHGAPPAMSAQAVREYFGD
                     ALDGLLDAPLGGLDRPTTIRDALTGAVIRA"
     gene            complement(1680..>3707)
                     /gene="topA"
                     /locus_tag="VFM52_08100"
     CDS             complement(1680..>3707)
                     /gene="topA"
                     /locus_tag="VFM52_08100"
                     /EC_number="5.6.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007808660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003917 - DNA topoisomerase type I (single
                     strand cut, ATP-independent) activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I DNA topoisomerase"
                     /protein_id="HET8765168.1"
                     /translation="LVGFNLSPVLWRKVQRGLSAGRVQSPALRMIVEREEEIEAFKAR
                     EYWTVEAQLRHADGEFSAKLTRLNGKKFEQFDLTSEADALAARDALKQAARGRLTVSE
                     VSSKERKRRPAAPFTTSTLQQEAARKLGFTTSRTMKVAQGLYEGVALGSEGNVGLITY
                     MRTDSTMLGDDAVAELRQLIARDFGGQALPDAPQFYKVKSKNAQEAHEAIRPTSAMRT
                     PQSIAGFLTEEQRKLYTLIWKRAVACQMIHATLNTVAVDFELPHAAGGPASFRATGTT
                     VVDPGFLAVYEEGRDQKGAEDDDENRRLPRLAKGEDVPLTAIAADQHFTEPPPRYSEA
                     SLVKAMEEYGIGRPSTYASIIQVLLHREYVYLDSRRFKPTDVGRAVSKFLTAHFTRYV
                     DYDFTAKLEDELDAVSRGEEQWVPLMQRFWKPFKQQVDEKTETVDRSEATGARVLGTD
                     PKSGKPVFVRLGRFGPYAAIGDKDSDEKLQFASLRPGQSMHSITLDEALQLFRLPRKL
                     GAAPNGDEVSVGVGRFGPFVKQGSTYASLKPEDDPYTIELSRALQLVADKLEMLANRV
                     ITDFGNGVQVLNGRYGAYITDGEKNARIPKDTEPKSLTLAQCQELLAAAPAKKGRFGK
                     AATKKAAAKAPAAKKTAVKKAATKKAAAKKTATSKPATKKAPARKHAKATA"
BASE COUNT          472 a         1225 c         1420 g          590 t
ORIGIN      
        1 aagcgatgcg cggcggcgtc cacttccatc aggtcggcaa gcaccaccgg ggcgtcgagt
       61 tgcggcgcgc tcacctcggt gccgtcgggg cgtgggtgca gcgcgacgcc ggggtagagc
      121 gcccagtcgg tgtcggcggt aagccggcgg ctggcgatgg cgcaggtttc ggtggagccg
      181 aatacttcga ctagcggcgc accgaaggcg cgttcggcgt cacccgcgag ttcgggtggc
      241 atcggcgcgg tcgccgacag catggcggcc agcggcggca gggcgaggtt ggcggcgacc
      301 agcgcgcgca ggtgtaccgg cgtcgtcacc agcacgcgcg gcgccggcac cgtggccagc
      361 gcagcggcga tgtcggcggg aaagaacggc ttcccggcgt gcaccgcgat ggtgcccagg
      421 agcggcagca gcacgctggt ctcgatgccg tagatgtgct gcggcggcac cgtggcgacc
      481 acgttgacgc gattcccggc gacgcgggcg agcatggcgc gggtgccgcg ggtggcggcg
      541 tgcagggcac cccagcgctt tgcgttcggg cgtggggtgc cggtcgagcc ggaggtgtag
      601 gcgatcagcg cgagctggtc ggcgggaacc atgggcacgg cgccggcgaa gggctcgtcg
      661 gcgagcggcg gcaagcgatg atagccgcgc agcgccgtgg cccgggcctg ttcacccagc
      721 gcgtagcagc cggggtgcgt cgccatcacc tcggccacca tctgcggtgc gcgcgagggg
      781 ggcagcaggt tgacctggcc acgcacgacc aacgcacaga acgcgacgag gaacgcgtag
      841 cggtcttcgc acaggttgac ggcagcggtc gctggcggca gcgcagccgc cacctgggcg
      901 acgtgggcga ggaaggtgcc cgcgctgacc gcgtggccgg cgcgccacgc cacggtgcgc
      961 tgcaggtcgt ccgccgccag cagcggcagc gcggcggcgg atgccgccgg ccggcaggat
     1021 gggcacgatt cgggatgcac ggcggacatg acgcggcgca gggtaccggt tatcggcgtg
     1081 cggcggcgag tggcggcagc acccgattca tgcgcggatc acggcgccgg tcagcgcatc
     1141 gcggatggtg gtggggcggt ccagcccgcc gagcggcgcg tcgagcaggc cgtcgagggc
     1201 atcgccgaaa tactcgcgca ccgcttgcgc gctcattgcc ggtggcgcgc cgtgcgggtt
     1261 cgcgctggtc gacaccagcg cgccgccata ggcgcggcac agcgcggcgg ccggtgcgtg
     1321 cgcggtgacc cgcagcgcga tgccggggtg cgcgccggcg acccatgcgg gcaggtccgc
     1381 gctgcgcggg aagatccagg tgtgcggacc gggccagctg gccttgacct gggccagcac
     1441 cgcagccggc accttggtga agtcgatgta gcgctcgacc tgggcgaagt cggcggcgat
     1501 cagcagcacg ccctgcgtgg cggggcgctg cttgagcgcg aagatccgct cgaacgcggc
     1561 gcggttcgcg ggatcgcagc cgaggccgta gacgccttcg gtcggatagg cgagcacctg
     1621 gccgtcgcgc agcagcgcag cggcgtcggc cagcgtggcc agcgtgaagt cgcgccgcat
     1681 caggccgtgg ccttggcgtg cttgcgtgcc ggggctttct tcgttgccgg cttggacgtg
     1741 gcggtcttct ttgccgcggc tttcttggtg gcggccttct tcaccgcggt tttctttgcc
     1801 gccggggcct tggcggcggc tttcttcgtc gccgccttgc cgaagcggcc cttcttggcc
     1861 ggcgcggcag cgagcaactc ctggcattgc gcgagcgtga ggctcttcgg ctcggtgtcc
     1921 ttggggatgc gcgcgttctt ctcgccgtcg gtgatgtagg cgccgtagcg gccgttcagc
     1981 acctgcaccc cgttgccgaa gtcggtgatg acgcggttgg cgagcatttc cagcttgtcg
     2041 gccaccagct gcagcgcgcg cgacagctcg atggtgtacg ggtcgtcctc gggcttcagc
     2101 gacgcatacg tcgaaccctg tttgacgaag gggccgaagc ggccgacgcc gacgctgact
     2161 tcgtcgccgt tcggcgcggc gcccagcttg cgcggcaggc ggaacagctg cagcgcctcg
     2221 tccagcgtga tcgagtgcat gctctgcccc ggccgcagcg aggcgaattg cagcttctcg
     2281 tcggaatcct tgtcgccgat cgcggcgtac ggcccgaagc ggccgaggcg cacgaacacc
     2341 ggcttgccgc tcttggggtc ggtgccgagc acgcgcgcgc cggtagcctc gctgcggtcg
     2401 acggtctcgg tcttctcgtc cacctgctgc ttgaacggct tccagaaccg ctgcatcagc
     2461 ggcacccatt gctcctcgcc gcggctcacc gcgtcgagct cgtcttccag cttggcggtg
     2521 aagtcgtaat ccacgtagcg ggtgaaatgc gcggtgagga acttgctcac cgcgcggccg
     2581 acgtcggtgg gcttgaagcg gcggctgtcg aggtagacgt attcgcggtg cagcagcacc
     2641 tggatgatgc tggcgtaggt cgacggccgg ccgatgccgt attcctccat cgccttgacc
     2701 aggctcgcct cggagtagcg cggcggcggc tcggtgaagt gctggtcggc ggcgatcgcg
     2761 gtgagcggca cgtcctcgcc cttggcgagg cgcggcaggc ggcggttctc gtcgtcgtcc
     2821 tcggcaccct tctggtcgcg gccctcctcg tacacggcga ggaagccggg gtcgaccacg
     2881 gtggtgccgg tggcgcggaa gctggccggc ccgccggcgg cgtgcggcag ctcgaagtcg
     2941 acggcgacgg tgttgagcgt ggcgtggatc atctggcagg cgacggcgcg cttccagatc
     3001 agggtgtaga gcttgcgctg ctcttcggtg aggaagccgg cgatcgactg cggcgtgcgc
     3061 atggccgagg tgggccggat cgcctcgtgc gcttcctgcg cgttcttgga tttcaccttg
     3121 tagaactgcg gcgcgtccgg cagcgcctgg ccgccgaagt cgcgcgcgat cagctggcgc
     3181 agctcggcca ccgcgtcgtc gccgagcatg gtggagtcgg tacgcatgta ggtgatcagg
     3241 ccgacgttgc cctcgctgcc cagcgccacg ccctcgtaca ggccctgcgc taccttcatc
     3301 gtgcggctgg tggtgaagcc cagcttgcgc gcggcctcct gctgcagggt ggaggtggtg
     3361 aacggggcgg cggggcggcg cttgcgctcc ttcgagctga cctcgctgac cgtgaggcgg
     3421 ccgcgcgcag cctgcttcag cgcgtcgcgc gcggccagcg cgtcagcctc gctggtgagg
     3481 tcgaactgct cgaacttctt gccgttgagc cgggtgagct tggcgctgaa ctcgccgtcg
     3541 gcgtggcgca gctgcgcctc caccgtccag tactcgcgcg ccttgaacgc ctcgatctcc
     3601 tcctcgcgct ccacgatcat gcgcagcgcg ggcgactgca cgcggccggc ggagaggccg
     3661 cgctgcacct tgcgccacag caccggcgac aggttgaagc cgaccag
//
LOCUS       DASSVL010000462         2081 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_194013, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000462 DASSVL010000000
VERSION     DASSVL010000462.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2081)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2081)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2081
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_194013"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2078)
                     /locus_tag="VFM52_08105"
     CDS             complement(<1..2078)
                     /locus_tag="VFM52_08105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007512816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-glutamate dehydrogenase"
                     /protein_id="HET8765169.1"
                     /translation="METAVLEVLKQAKLSPQRLEQAQFFIGAFFARSTEGDRDLHTPA
                     QWAALVGGLLDFMQQRMPGRAALRVLNPEANHVGRSRLQIVTDDMPFLVDTVSMAIAA
                     RLQIHAVIHPVVKAQRDAAGKLLGFGDAGHAESVMHFEIDRVADADEQAALLAQVGAA
                     LEDVRVAVGDWATMRDKALAIAGELPRRKPAMDADSANEAGEFLRWVAADNFTFLGYR
                     EYEVADADGDRVLRAIDGSGLGILRKNEQSMTPRSLKSLAASELPQSGSTDAIILTKT
                     NARSRVHRAGYMDYIGVLRFGAGGHAVAEQRFLGMFTSNAYMTRPQDVPLVRRKVEAV
                     LARSNLKRDSYSGKTLRHIMETLPREELLQASEDELYALANGILELRQRAHTRLFMRR
                     DRYGRFFTCLVYMPRDRFNTSVRERIEHLMGEALRAEQIDSSVQMGEGPLARLHIVLR
                     PKVGDVPECDLAALEQGVAAIVRNWQDDVREELIRTRGEHDGVVLANRFVAALPAGYV
                     EDVSAAVAAEDVYQLSLLEGDDALRMSFYHPPKAPETLRFKVYRSAGDIALSEVLPQL
                     EHLGLRVLTEHVYEVGGDKLALSIQDFEVQPVGKLTFTVEQVGALFEHAFEHVWRGKA
                     ESDGFNRLVLGAKLDWRQVAMLRGYCKYMLQAGTTYSQAYMEETLNRYPAIAGLLVEL
                     FLAKFDPRRET"
BASE COUNT          324 a          728 c          698 g          331 t
ORIGIN      
        1 gtctcgcggc gcgggtcgaa cttggcgagg aacaactcca ccagcaagcc ggcgatggcc
       61 gggtagcggt tcagcgtctc ctccatgtag gcctgcgagt aggtggtgcc ggcctgcagc
      121 atgtacttgc agtagccgcg cagcatcgcc acctggcgcc agtcgagctt ggcgccgagc
      181 acgaggcggt tgaaaccgtc gctctcggcc ttgccgcgcc acacgtgctc gaacgcatgc
      241 tcgaacagcg cgccgacctg ctccaccgtg aaggtgagct tgccgaccgg ctgcacctcg
      301 aaatcctgga tcgacagcgc cagcttgtcg ccgccgacct cgtacacgtg ctcggtcagc
      361 acgcgcaagc cgaggtgttc cagctgcggc agcacttcgg aaagcgcgat gtcgcctgcc
      421 gagcggtaga ccttgaagcg cagcgtctcg ggcgcctttg gcgggtggta gaacgacatc
      481 cgcagcgcat cgtcgccttc cagcagcgag agctggtaga cgtcctcggc ggccaccgcc
      541 gcgctgacgt cctcgacgta gccggccggc aacgcggcca cgaagcggtt ggcgagcacc
      601 acgccgtcat gttcgccgcg ggtacggatc agctcctcgc gcacgtcgtc ctgccaattg
      661 cgcacgatcg cggccacgcc ctgctccagc gccgccaggt cgcactccgg cacgtcgccc
      721 accttgggcc gcagcacgat gtgcaggcgc gccagcgggc cctcgcccat ctgcaccgag
      781 gagtcgatct gctcggcacg cagcgcctcg cccatcaggt gctcgatgcg ctcgcgcacc
      841 gaggtgttga agcggtcgcg cggcatgtac accaggcagg tgaagaagcg gccgtagcgg
      901 tcacggcgca tgaacagccg cgtgtgcgcg cgctggcgca gttcgaggat gccgttggcc
      961 agcgcgtaca gctcgtcctc gctcgcctgc agcagctcct cgcgcggcag cgtctccatg
     1021 atgtggcgca gcgtcttgcc ggagtacgag tcgcgcttga ggttggagcg cgccagcacc
     1081 gcctcgacct tgcggcgcac cagcggcacg tcctgcgggc gggtcatgta ggcattggag
     1141 gtgaacatgc cgaggaaacg ctgctcggcc acggcatggc caccggcgcc gaagcgcagc
     1201 acgccgatgt agtccatgta gccggcgcgg tgcacgcgcg agcgcgcgtt ggtcttggtc
     1261 aggatgatgg cgtcggtcga gccgctctgc ggcagttcgc tggccgccag cgacttcagc
     1321 gagcgcggcg tcatcgactg ctcgttcttg cgcaggatgc cgaggccgga accgtcgatc
     1381 gcgcgcaaca cgcggtcgcc gtcggcatcg gccacctcgt attcgcgata gccgaggaag
     1441 gtgaagttgt cggccgcgac ccagcgcagg aactcgccgg cctcgttcgc cgagtcggcg
     1501 tccatcgccg gtttgcgccg cggcagttca ccggcgatcg ccagcgcctt gtcgcgcatc
     1561 gtcgcccagt cgccgacggc gacgcgcacg tcttccagcg ccgcaccgac ctgcgccagc
     1621 agcgcagcct gctcgtcggc atccgccacg cggtcgatct cgaagtgcat caccgattcg
     1681 gcatgcccgg catcgccgaa cccgagcagc ttgccggccg catcgcgctg cgccttcacc
     1741 accggatgga tcactgcatg gatctgcagg cgcgctgcga tcgccatgct cacggtatcg
     1801 accaggaacg gcatgtcgtc ggtgacgatc tgcagacggc tgcggccgac gtggttcgct
     1861 tccgggttca gcacgcgcag tgcggcacgc cccggcatgc gctgctgcat gaagtccagc
     1921 aggccgccca ccagggcggc ccattgcgcc ggcgtgtgca ggtcgcgatc gccctccgtg
     1981 ctccgcgcga agaacgcgcc gataaaaaat tgcgcctgtt caaggcgctg gggggagagc
     2041 ttggcttgct tcaagacctc gagtacagcg gtctccagcg g
//
LOCUS       DASSVL010000463         5164 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_970982, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000463 DASSVL010000000
VERSION     DASSVL010000463.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 5164)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5164)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5164
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_970982"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            87..698
                     /locus_tag="VFM52_08110"
     CDS             87..698
                     /locus_tag="VFM52_08110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008209159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_process: GO:0042953 - lipoprotein transport [Evidence
                     IEA];
                     GO_process: GO:0044874 - lipoprotein localization to outer
                     membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipoprotein carrier protein LolA"
                     /protein_id="HET8765170.1"
                     /translation="MRHLLIALLACLLVPVVHAQGGDPLLRQVLGELSSHPAVRAEFT
                     QTRTSPALDKPQISTGKLLFVLGHGMLWQTSAPFQQTLVLTGARTARIDADGRTQPMP
                     GDRGVSQVSQMLQGLLGGKLDEALRQFDVAASGSPADWTLHFTPKQARVARVLAAITL
                     AGNDYLQAITIDMQDGTRTQIRFAATHDAGPLAALERDALGQP"
     gene            695..3067
                     /locus_tag="VFM52_08115"
     CDS             695..3067
                     /locus_tag="VFM52_08115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017462211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MMPL family transporter"
                     /protein_id="HET8765171.1"
                     /translation="MTEAGIKRRAGLFALATLLVATLGAWLLFGRGPLPIQTDLLAML
                     PATEQNPVAEAAVARLAHANGDRVVLVVSSTDDAHAKEAARALGKALTRHAVFAEVTA
                     ELPPFDLAQLAAPYLAHRHWLLTAADRVLFAQPDFDPAQALAQRLNEPFLTGVGVTLA
                     QDPFGTLQHFLATQPWNRSPLMPEDDLLVARDGSETRVLVTATLAGSAYADDVQRRAL
                     AALGAAEADVHQHWPDVGILRTGAVFYAAAARAGAERDVHRVGWISALGIALLLLAVF
                     RSAGSLALTFLSTVVGVIAATTVTLLVFGQVFLLTLVFGAALLGEAVDYSIQYLTARA
                     NAGTRWRPGAGIRQVRSALLLALLTSLLGYALLGLVPFPALRQMAVFAVAGMAAACAS
                     VFWLLPALLAHPASPLAPRLVRAAHRVQQALAHPARGWRGGALLMAIGLVALPGWLRL
                     QHDDDVHNLVAQPADLVAQEARIRAITGLGNGSQFYLVQGHDVDATLRHEQALEARLQ
                     PLVDAGRLGGWLGLAGMVPPASQQAQDHAALARLFDHPAALRKTLAGAGFREAAIDAW
                     LASWPGTPLTLEAWLRTPIATPFRQLWMGCDERGCASLVLPQGDAADHLLAQAAHGLP
                     GVTLVDKPASVSALFGRYRGYASLWLIAAILAIVPVFGWRYGWHRMPRVLAPPVLGIA
                     LTLATLGYLGQPLTLFHWMALMLVLGVGANYAVFLFEGEPHTTDRPGAMYASVLLSAL
                     TALLSFGLLSLSSLPALRDFGLTLLLGIGFTALLVPASRADFACTSGVDA"
     gene            3064..3717
                     /locus_tag="VFM52_08120"
     CDS             3064..3717
                     /locus_tag="VFM52_08120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008209168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8765172.1"
                     /translation="MRRTPLAGTAAPFTAPAPGVCTPRVDIAACRSRGLHAGRALDIA
                     LPLVGVLYPFLVYYGMSRIAPSVFALALGAAWLLRAPRLWREPGGRWMLGAALAYCAL
                     LAVSGESLLLRWYPTLISLLLLAAFGLSLKFGPPLVERIARAREPDLPAAAIPYTRKV
                     TWAWVGFFVWNAAASAALTLWAPLAWWTLYNGLLAYFIMGTLFAGEWLLRQHMRARA"
     gene            3714..4565
                     /locus_tag="VFM52_08125"
     CDS             3714..4565
                     /locus_tag="VFM52_08125"
                     /inference="COORDINATES: protein motif:HMM:NF019589.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8765173.1"
                     /translation="MIDAPPLVAIDAGADECVATLAIRPELACLRGHFPGHPVVPGVV
                     LVGWALELAATHLGMAPDCREMETLKFQRVLQPGQRVELTLRADRDRHTLRFAYRDGD
                     TMCASGRMLPPQANGQQIAEAAPSGGKDAPLPWPIAELIPHRDGMLLLDALAACDADH
                     VRCRYRVPPGGLLHDASGTLPAWAGVELMAQAAAAWAGCQATRASEPVRRGFLLGTRH
                     YACNVAGFAPGNLLMVEARHTFGDANGMGMFACRILAPGVLAEARLAVFSPPESASRS
                     IAGPIGG"
     gene            complement(4616..4948)
                     /locus_tag="VFM52_08130"
     CDS             complement(4616..4948)
                     /locus_tag="VFM52_08130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009393272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000049 - tRNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA-binding protein"
                     /protein_id="HET8765174.1"
                     /translation="MAEITWADFEKVLIVVGTVTRVEAFPEARKPAWKVWADFGPHGE
                     KKTSAQIVALYRAEDLVGRQIVGVINFPEKQIGPFRSQFLLTGFPTPDGVVLTAVERP
                     VPNGTRLA"
     gene            complement(4954..>5164)
                     /locus_tag="VFM52_08135"
     CDS             complement(4954..>5164)
                     /locus_tag="VFM52_08135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008436231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HET8765175.1"
                     /translation="AQAFGGHGLAPTCAAGELVAAAIADGDPGWQAFSEFGLASAGKP
                     FGFAAAQGSYWWQELRDALKTRLEA"
BASE COUNT          668 a         1938 c         1731 g          827 t
ORIGIN      
        1 cggccggcat gccggtcggt cgcgcttcac gtggctcggg acaagctgcg tcctgcccgc
       61 cgcctcgccc cgcacgaagg tcatccatgc gccacctgct catcgccctg ctcgcctgcc
      121 tgctggtgcc ggtcgtgcac gcgcagggag gggatccgtt gctgcggcag gtgctgggcg
      181 aattgtccag ccacccggcc gtgcgcgcgg aattcaccca gacccgcacc agcccggcgc
      241 tggacaagcc gcaaatcagc accggaaaac tgctgttcgt gctcgggcac ggcatgttgt
      301 ggcagacctc ggccccgttc cagcagacgc tggtactgac cggcgcgcgc accgcgcgta
      361 tcgatgccga tggccgcacg cagccgatgc ccggcgaccg cggcgtcagc caggtatcgc
      421 agatgctgca ggggctgctc ggcggcaagc tcgatgaggc gctgcgccag ttcgatgtgg
      481 ccgccagtgg ctcgcccgcc gactggacgc tgcacttcac gccgaagcag gcgcgggtcg
      541 cacgcgtgct ggccgccatc accctggccg gcaacgacta cctgcaagcc atcaccatcg
      601 acatgcagga cggcacgcgc acgcagatcc ggtttgccgc cacgcatgac gccgggccgc
      661 tcgccgcgct cgaacgcgac gccctcggcc agccatgacc gaggccggca tcaagcggcg
      721 cgccggcctg tttgcactgg ccaccctgct ggttgccacc ttgggtgcat ggttgctgtt
      781 cggccgcggc ccgctgccga tccagaccga cttgctggcg atgctgccgg ccaccgaaca
      841 gaacccggtg gccgaggccg ccgttgcacg gctcgcgcat gccaacggcg accgcgtggt
      901 gctggtggtg tccagcaccg acgacgcaca cgccaaggag gccgcgcgtg cgcttggcaa
      961 ggcgctgacg cggcacgccg tatttgccga ggtcaccgcc gagctgccgc cgttcgacct
     1021 cgcgcaactg gcggcgccct atctcgccca tcggcactgg ctgctgaccg cggccgatcg
     1081 tgttctgttt gcgcaaccgg atttcgaccc ggcgcaggcg ctggcgcagc ggctcaacga
     1141 acccttcctc accggcgtcg gtgtgacgct ggcgcaggac ccgttcggca ccctgcagca
     1201 cttcctcgcc acgcaaccgt ggaaccgctc gccgctgatg ccggaggacg acttgctggt
     1261 cgcccgcgac ggtagcgaga cccgcgtgct ggtgaccgcg acgctggccg gctcggccta
     1321 cgccgatgac gtgcagcgcc gcgcactcgc cgcgcttggc gccgcggaag cggatgtcca
     1381 ccagcactgg ccggacgtcg gcatcctgcg taccggcgcg gtgttctacg ccgctgccgc
     1441 ccgcgccggc gcggagcgcg acgtgcaccg ggtgggctgg atctccgcgc tcggcatcgc
     1501 gttgctgctg ctggcagtgt tccgctccgc cggctccctc gcgctcacgt tcctgtccac
     1561 cgtggtcggc gtgatcgcgg ccaccacggt caccttgctg gtgttcggcc aggtgttcct
     1621 gctgacactg gtgttcggcg cggcgctgct gggcgaggcg gtcgactact cgatccagta
     1681 cctcaccgcg cgcgccaatg ccggtacgcg ctggcgtccc ggcgccggca tccgccaggt
     1741 gcgcagcgcg ctgctgctcg cgctgctcac gtccctgctc ggctacgcgc tgctcgggct
     1801 ggtgccgttc ccggcgctgc gccagatggc cgtgttcgca gtggccggca tggccgcggc
     1861 atgcgccagc gtgttctggc tgctgccggc gctgcttgcg cacccggcca gtccgctggc
     1921 gccgcgcctg gtgcgggcgg cgcaccgtgt acagcaagca ttggcacacc ccgcccgtgg
     1981 ttggcgtggc ggcgcgctgc tcatggccat cggcctggtc gccctacccg gctggctgcg
     2041 cctgcagcac gacgacgacg tgcacaacct ggtcgcacag cctgcggatc tggtggcgca
     2101 ggaagcccgc atccgcgcca tcaccgggct tggcaacggc agccagttct atctggtgca
     2161 aggccacgac gtggatgcca cgctgcgcca cgaacaggcg ctcgaagccc gcctgcagcc
     2221 gctggtcgac gccggccggc ttggcggctg gctcggcctg gccggcatgg tgccgccggc
     2281 cagccagcag gcgcaggatc acgccgcgct cgcgcggttg ttcgaccacc ccgcggcctt
     2341 gcgcaagacg ctggcgggcg ccggcttccg cgaggcggcg atcgacgcct ggctcgccag
     2401 ctggcccggt acgccgctga cgctcgaagc ctggctgcgc acgccgatcg ccacgccgtt
     2461 ccggcaactg tggatgggct gcgacgaacg cggctgcgct tcgctggtgc tgccgcaagg
     2521 ggatgccgcc gatcacctgc tggcccaggc cgcgcatggc ctgcccggcg tgacgctggt
     2581 ggacaagccg gccagcgtgt cggcgctgtt cggccgctac cgcggctatg cgagcctatg
     2641 gctgatcgcc gccatcctcg cgatcgtgcc ggtattcggc tggcgctacg gctggcaccg
     2701 catgcctcgc gtgctggcgc caccggtgct cggtatcgcg ttgacactgg ccacgctggg
     2761 ctatcttggc cagccgctga ccctgttcca ctggatggcg ctgatgctgg tgctcggcgt
     2821 tggcgccaac tacgcggtgt tcctgttcga gggtgagccg cacacgaccg atcgccccgg
     2881 cgcgatgtac gccagcgtgc tgctgtcggc gctgaccgcg ctgctctcct tcggcctgct
     2941 ctcgctcagt tcgttgccgg cgctgcgcga ctttggcctg accctgctgc tcggcatcgg
     3001 cttcaccgcg ctgctggtgc ccgccagtcg cgccgacttc gcctgcacca gcggagtcga
     3061 tgcatgaggc gcacgccact cgccggcacc gccgccccct tcaccgcacc cgcgccaggc
     3121 gtctgcacgc cgcgtgtcga catcgctgct tgccgttcgc gcgggctcca tgccggccga
     3181 gccctggaca tcgccctgcc gctggtgggc gtgctgtacc ccttcctcgt ctactacggc
     3241 atgagccgca tcgccccatc ggtgttcgcc ctcgcgctgg gcgcagcgtg gctgctgcgc
     3301 gcaccacgcc tttggcgcga acccggcggc cgctggatgc tcggtgccgc gctggcctac
     3361 tgcgcgttgc ttgcagtcag cggcgagagc ctgctgctgc gctggtaccc gacgttgatc
     3421 agcctgctgc tgctcgccgc cttcggcctc agcctgaaat tcggcccacc gctggtcgag
     3481 cgcatcgcac gtgcgcgcga gcccgatctg ccggcggccg ccatcccgta cacgcgcaag
     3541 gtgacctggg cgtgggtcgg gttcttcgtg tggaacgcgg cggcttccgc cgcgctcacg
     3601 ctgtgggcgc cactggcgtg gtggacgctg tacaacggcc tgctcgccta cttcatcatg
     3661 ggcacgctgt tcgccggtga gtggctgctg cgccagcaca tgcgggcacg cgcatgatcg
     3721 atgcgccgcc cctcgtcgcg atcgatgccg gcgccgacga atgcgtagcc acgttggcga
     3781 tccggcccga gctggcctgc ctgcgcgggc atttccccgg ccatccggta gtgcccggcg
     3841 tggtgctggt gggttgggcg ctggagctgg ctgccactca cctcggcatg gcaccggact
     3901 gccgcgagat ggagacgctg aaattccagc gcgtgttgca gcccggccag cgagtcgagc
     3961 tgacgctgcg cgccgaccgc gaccgccaca cgctgcgctt cgcctaccgc gatggcgaca
     4021 ccatgtgtgc aagcggtcgg atgctgccgc cgcaagccaa cggacagcag atcgccgaag
     4081 ccgcaccgtc cggcgggaaa gacgcgccgc tgccctggcc gatcgccgag ttgattccgc
     4141 accgcgacgg gatgctcctg ctcgacgccc tcgccgcctg cgacgccgac cacgtgcgct
     4201 gccgataccg cgtaccgcca ggcggactgc tgcatgacgc cagcggcacg ctgccggcct
     4261 gggccggcgt ggaactgatg gcgcaagccg ccgcggcctg ggccggctgc caggcaacgc
     4321 gggccagcga gccggtacgg cgcggcttcc tgctcggcac ccggcactac gcctgcaacg
     4381 tcgccggctt cgcgccgggc aacctgctga tggtcgaggc gcgccacacc ttcggcgacg
     4441 ccaacggcat gggcatgttc gcctgccgca tcctcgcgcc gggcgtgctg gccgaagccc
     4501 ggctcgcggt gttcagcccg cccgaaagcg catcacggtc aattgcaggc ccaatcggcg
     4561 gttgacatcc gccggcacct cccaaaactg cggcgttccc gccacggaca ggaattcatg
     4621 ccaaccgcgt cccgttcggc accggccgct cgaccgccgt cagcaccacg ccatccggcg
     4681 tcgggaaccc ggtcagcagg aactgcgagc ggaacgggcc gatctgcttc tccgggaaat
     4741 tgatcacgcc gacgatctgc cggccgacga gatcctcggc gcgatacagc gccacgatct
     4801 gcgcgctggt cttcttctcg ccatgcgggc cgaagtccgc ccacaccttc cacgccggct
     4861 tgcgtgcctc gggaaacgcc tcgacccggg tcaccgtgcc gacgacgatc agcacctttt
     4921 cgaagtcagc ccaggtgatt tccgccacgt cgttcatgct tccagcctcg tcttcagtgc
     4981 gtcgcgcagc tcctgccacc agtagctgcc ttgtgcggca gcgaagccga acggcttgcc
     5041 ggccgacgcc agaccaaact cggagaacgc ctgccagccg ggatcgccgt cggcaatcgc
     5101 cgccgccacc agctcgccag ccgcgcaggt tggcgccaac ccgtgcccgc cgaacgcctg
     5161 ggca
//
LOCUS       DASSVL010000464         2111 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_349663, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000464 DASSVL010000000
VERSION     DASSVL010000464.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2111)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2111)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2111
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_349663"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..422
                     /locus_tag="VFM52_08140"
     CDS             <1..422
                     /locus_tag="VFM52_08140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008211447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8765176.1"
                     /translation="TPAGEYWADFGFLAAYEHNTRPGVPDTAEFGPLIAKAVGRFTHT
                     VNLIWEKQLGAGAAGKYEFRYSYQGTYTLSSAFRPGIEAYGRPADHAYQAGPVIAGDW
                     YIPGTRSELEYRFGVVLGLNAAAPRRTWLAQLEYEFF"
     gene            complement(520..1551)
                     /locus_tag="VFM52_08145"
     CDS             complement(520..1551)
                     /locus_tag="VFM52_08145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015447288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YncE family protein"
                     /protein_id="HET8765177.1"
                     /translation="MSVKADRSFRRGLMALVAFAALCGAAKAFSGASAPGSRLPLATL
                     AEVPLPGRATRWDYASLDEGRHLLFLAHLGDSTVVVFDTTRRKVVATIPHVSEVHGVL
                     YVPELDRVYASATGTDEVVAIDPTTFRIIARTPAGDYPDGMAYAPGVHKLYVSDERGR
                     TDTVIDVRSNRREATIPLGGEVGNTQYDPVTQHIFANVQTRRQLVEIDPVTDKVVSRI
                     NLPGAAGNHGLYIDAASRLAFIACEDNSKLLVLDMASRKLRATFDVADDPDVLAFDAS
                     LGWLYVAGESGEVSIFKVTGQSVRPLATAMLGPNAHVVAVDGATHQAYFPLKPMLGKS
                     RLRITRPQL"
BASE COUNT          348 a          710 c          717 g          336 t
ORIGIN      
        1 tcaccccggc gggcgagtac tgggccgact tcggcttcct cgcggcctac gagcacaaca
       61 cgcggcccgg cgtacccgac accgcggaat tcgggccgtt gatcgcgaag gcggtcggcc
      121 gcttcacgca cacggtgaac ctgatctggg aaaagcagct gggcgccggc gccgccggca
      181 agtacgaatt ccgctacagc taccagggca cctacacgct gtcctcggcg ttccgccccg
      241 gcatcgaggc ttacggccgg ccggctgacc acgcctacca ggccggcccg gtgatcgccg
      301 gcgactggta tatcccgggt acccgcagcg agctggagta ccgcttcggc gtcgtgctcg
      361 ggctcaatgc cgctgccccg cgccgcacct ggctcgcgca gctggagtac gagttctttt
      421 gaacggaacc tgttgccgcc cggcttggcg cgaactgatg agcatgcggg tcgcgggcga
      481 cgccacccac tcgttgcgcc ttccagggac cgggcaagcc taaagctggg gtcgcgtgat
      541 ccgcagcctg gatttgccca gcatgggttt gagcgggaaa taggcttggt gcgtggcgcc
      601 gtccacggcg acgacgtggg cattcgggcc gagcatcgcg gttgccagcg gccggacgga
      661 ctgcccggtg accttgaaga tcgacacctc gccggattcg ccggccacgt agagccagcc
      721 gagcgaagcg tcgaaggcca ggacatccgg gtcgtccgcg acgtcgaagg tggcccgcag
      781 ctttcgactg gccatgtcca gcaccagcaa cttgctgttg tcctcgcacg caatgaaggc
      841 cagccgggag gcggcgtcga tgtagaggcc gtggttgccg gcagcacccg gcaggttgat
      901 ccggctgacc accttgtcgg tgacgggatc gatttccacc agctgcctgc gcgtctgcac
      961 gttcgcgaag atgtgctggg tgacgggatc gtactgggtg ttgcccacct cgccgcccag
     1021 cgggatcgtg gcctcccggc ggttcgaccg gacgtcgatc acggtatcgg ttctgccgcg
     1081 ctcgtcggag acgtacaact tgtgcacgcc cggggcatag gccataccgt ccggataatc
     1141 cccggcggga gtgcgcgcga tgatcctgaa ggtcgtggga tcgatcgcga ccacttcatc
     1201 ggtacccgtc gccgaggcgt acacccgatc cagctccggc acgtacagca cgccgtggac
     1261 ctcgctgacg tgggggatgg tcgccaccac cttgcgccgg gtggtgtcga acacgaccac
     1321 ggtgctgtcg cccaggtgcg ccaggaaaag cagatggcgc ccttcatcga ggctggcgta
     1381 gtcccagcgc gtggccctgc caggcaaggg cacctcggca agcgtggcca gcggcagccg
     1441 gctgcccgga gcactcgcgc cgctgaatgc cttcgcggcc ccgcacagtg ccgcgaaggc
     1501 caccagggcc atcaaacctc gacggaagct acggtctgcc ttgacgctca tgggctggcg
     1561 ctcgtatcca ggccacgcat cctacgcgcg ttgccacggc gtcaccgttc ttccagtggc
     1621 ttgagatgtc ggacctgcgc caggagcagc aggtcgtaca ggatcccggg cgggccaccg
     1681 atcggcagcg gccaagcgaa agagggtgtt gcgaacgacg gtcgggaaac atcggcattg
     1741 acgacgatgc aaggggcagc cggcctcccg gatcgccggc gtcgcccttc cgcattccag
     1801 cgtgcgcggc ggcggggccg acctgcgcca cggacgtgcc tacaccaaga gccggcagca
     1861 cgccagaccg cgcaagcgcg caagaacctg tggtgacatt ccgttcatgg cgttcgctta
     1921 tcgttggcgg agcacaccgg cacactgcgg tttcgccgcg cgtcgggaag aaacaaggat
     1981 tcgagatggt tcgccagcca aaggggcgtg gtgtcgctgc gcgaacggcg ctggcgggca
     2041 tgtcgtatgc actgctgctg tctgcctgcg ccgtcggccc gacgtatcac cggcccgcgc
     2101 cgccaaaggc a
//
LOCUS       DASSVL010000465         2279 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_151994, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000465 DASSVL010000000
VERSION     DASSVL010000465.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2279)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2279)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2279
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_151994"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..589)
                     /gene="minD"
                     /locus_tag="VFM52_08150"
     CDS             complement(<1..589)
                     /gene="minD"
                     /locus_tag="VFM52_08150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007079889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0000918 - division septum site selection
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="septum site-determining protein MinD"
                     /protein_id="HET8765178.1"
                     /translation="MTAEIIVVTSGKGGVGKTTTSASLATGLARAGKKVAVIDFDVGL
                     RNLDLIMGCERRVVYDFVNVIHGEATLKQALIRDKRYEDLYVLAASQTRDKDALTQEG
                     VQKVLDGLSEEGFDYIICDSPAGIEKGAHLAMYFADRAVVVVNPEVSSVRDSDRTLGL
                     LSSKTRRAEKGEGPGPQHLLLTRYNPVRVEAGEMMS"
     gene            complement(644..1390)
                     /gene="minC"
                     /locus_tag="VFM52_08155"
     CDS             complement(644..1390)
                     /gene="minC"
                     /locus_tag="VFM52_08155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007507737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004857 - enzyme inhibitor activity
                     [Evidence IEA];
                     GO_process: GO:0000918 - division septum site selection
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="septum site-determining protein MinC"
                     /protein_id="HET8765179.1"
                     /translation="MSTTLDTADACDLRFGQVGLACVRVYRADAAALCAELEHRVHSA
                     PQLFTRAAVVLDLSHLPALPDDGAVDALLEAVRSAGMLPVGLAYGTSETEALAQRMGL
                     PLIAKFRAAYEPAAAPAAQPARRQETPREPLPEPATPAAVALHHDGTVRSGQQVYAQG
                     GDLVVTGAVANGAEAIADGDVHIYGGLRGRAMAGAQGDTGARIYVHDFHAELVAIAGH
                     YRVFEQMPKDLEGQSVRCWLDGEKLLLAKL"
     gene            complement(1387..1992)
                     /locus_tag="VFM52_08160"
     CDS             complement(1387..1992)
                     /locus_tag="VFM52_08160"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007507738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HET8765180.1"
                     /translation="MALAIRDVDERDLDAVLALNNAAGKSILALDAARLRYFFEHADY
                     FRVAEIDGRLAGFLIALREGGDYASPNYRWFGGRYDAFVYIDRIVIANAYRRHGLGRV
                     FYCDVTSFAEVRVPLLACEVFLEPRNDVVILFHGTYGFQEVGQQRMGDDGPLVSLLAK
                     ELPSFGYVRDRWLAHGGLPDVPWLAERPHTAPAAPTGKRRA"
BASE COUNT          324 a          756 c          832 g          367 t
ORIGIN      
        1 cgctcatcat ctcgccggcc tcgacgcgca ccgggttgta gcgggtcagc agaagatgtt
       61 gcgggccggg gccctcgccc ttttcggcgc ggcgtgtttt cgaggacagc agtccgaggg
      121 tgcggtcgga gtcgcgcacg ctcgaaactt ccggattcac caccaccacc gcgcgatcgg
      181 cgaagtacat ggcgaggtgc gcgcctttct cgatgccggc cggcgagtcg cagatgatgt
      241 agtcgaagcc ctcctcggac agcccgtcga gcaccttctg cacgccttcc tgggtcagtg
      301 cgtccttgtc gcgggtctgg ctggcggcca gcacgtagag gtcctcgtag cgcttgtcgc
      361 ggatcagcgc ctgcttgagc gtcgcctcgc cgtggatgac gttgacgaag tcgtacacca
      421 cgcggcgctc gcaacccatg atgaggtcga ggttgcgcag gccgacgtcg aagtcgatca
      481 ccgcgacttt cttgccggca cgggcgaggc cggtggcgag cgaggcgctg gtcgtggtct
      541 tgccgacgcc gcccttgccc gaggtgacaa caatgatttc agcagtcaag gatccatctc
      601 ccgggagtgt tcttgtcgtt gtgggtgctg cgcctgcggc cacctacagc ttggccagca
      661 gaagtttctc gccgtcgagc cagcatcgca cggattggcc ctcgaggtct ttcggcatct
      721 gttcgaacac gcggtaatgc ccggcgatgg cgaccagctc ggcgtggaag tcgtgcacgt
      781 agatgcgtgc gccggtgtcg ccttgcgcgc cggccatcgc gcggccgcgc aggccgccgt
      841 agatgtgcac gtcgccgtcg gcgatggctt cggcgccgtt ggccaccgcg ccggtgacga
      901 cgaggtcgcc gccctgcgcg tatacctgct ggccggagcg cacggtgccg tcgtgatgca
      961 gcgcaacggc cgccggcgtg gccggctcgg gcaagggctc gcgcggcgtt tcctggcgcc
     1021 gggcaggctg cgctgccggg gccgcggccg gctcgtaggc ggcgcggaac ttcgcgatca
     1081 gcggcaggcc catgcgctgt gccagcgcct cggtctcgct ggtgccgtag gccaggccga
     1141 ccggcagcat gccggcgctg cgcacggctt cgagcagggc gtccaccgcg ccatcatccg
     1201 gcagcgccgg caggtggctc aggtcgagca ccacggcggc gcgggtgaac agttgcggtg
     1261 cgctgtgcac gcggtgttcc agctcggcgc acagcgccgc ggcatcggcg cggtacacgc
     1321 gcacgcaggc caggccgact tggccgaagc gcaggtcgca ggcgtcggcg gtatccaggg
     1381 tggtgctcat gcgcgacgtt ttccggtggg cgcggcgggg gcggtgtgcg ggcgttcggc
     1441 cagccatggc acgtcgggca ggccgccgtg ggccagccag cggtcgcgca cgtagccgaa
     1501 gctcggcagt tccttggcca gcaggctgac cagcgggccg tcgtcaccca tgcgctgctg
     1561 gccgacttcc tggaatccat aggtgccgtg gaacaggatg acgacgtcgt tgcgcggttc
     1621 gaggaatacc tcgcaggcca gcagtggcac gcgcacctcg gcaaagctgg tgacgtcgca
     1681 gtagaacacg cggccgaggc cgtggcggcg atatgcgttg gcgatgacga tgcggtcgat
     1741 gtagacgaac gcgtcgtagc gcccgccaaa ccagcggtag ttggggctgg cgtagtcgcc
     1801 gccctcgcgc agcgcgatca ggaagccggc caggcgacca tcgatctcgg cgacgcggaa
     1861 gtagtccgcg tgctcgaaga aatagcgcag gcgcgcggcg tcgagcgcga ggatggattt
     1921 tccggcggcg ttgttgagcg cgagcaccgc gtccaggtcg cgttcgtcga cgtcgcggat
     1981 ggcgagggcc attcgttgct ccgcaagggt gggacactgc cggcgtcgct gatgcaactc
     2041 ggcagcgccg cattatgcca tgcgccagga gcctgggtcg cagaaatcat ccgggccgcg
     2101 aggcccgccg cgtggtgcag cgctgcgccg cttcccgccc catggaacca cgccgaggca
     2161 gcggagtgtc acaaacctgt ccccgcgcgg cgagccgctc ccgcgaatgt ttccacgccc
     2221 aggctccggg gtgaccgcac accgcgcgac gcggcgtccg ccggcgcttg cgcggcccg
//
LOCUS       DASSVL010000466         3524 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_236422, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000466 DASSVL010000000
VERSION     DASSVL010000466.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3524)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3524)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3524
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_236422"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(199..1143)
                     /locus_tag="VFM52_08165"
     CDS             complement(199..1143)
                     /locus_tag="VFM52_08165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014401965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SPFH domain-containing protein"
                     /protein_id="HET8765181.1"
                     /translation="MGQLLALIIAVLVIVVILKMVRIVPQGYEWTVETFGKYTRTLTP
                     GLHLLIPVYQGVGRKMNMMELVLDVPSQDVITKDNAVVRVDGVVFFQVLDAAKAAYEV
                     ANLEQAALALVMTNIRTVLGSMDLDESLSQRDAINAKLLRVVDEATHPWGVKVNRIEI
                     KDIAPPRDLVDAMARQMKAEREKRANILDAEGFRQAAILKAEGEKQSVILAAEGEKEA
                     AFRAAEARERTALAEAKATSMVSQAIAGGDVNAINYFVANNYIEALKAMAASPNQKML
                     LLPIEATGVIGAMAGIAELAKEALGQQQAPRPAPPLPR"
     gene            complement(1295..2656)
                     /gene="murD"
                     /locus_tag="VFM52_08170"
     CDS             complement(1295..2656)
                     /gene="murD"
                     /locus_tag="VFM52_08170"
                     /EC_number="6.3.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013534496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008764 -
                     UDP-N-acetylmuramoylalanine-D-glutamate ligase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanine--D-glutamate
                     ligase"
                     /protein_id="HET8765182.1"
                     /translation="MRIAELAGQRVAVWGFGREAHAAIHAIRAVLPTLPLAVYCRDEA
                     EAAAAHAFDGALRVYPHEPDAVALSAYDVVVKSPGVSIYKPAITTAQAQGTVFTSGTA
                     LWFAENPEARVVAVTGTKGKSTTTSMLAHLARGLGVCTALAGNIGLPLLALQGQAADL
                     WVIELSSFQTGDAGLVELGVVTSLYEEHLDWHGSAARYVADKLKLADASRTLLVNGTQ
                     ENLLAHTAAHPRRRLFGTAGAWHVGHAAIQRGDEAVFALADMRAPGVHNALNACAALA
                     ALELLGFDAVRAAPALASFHPLPHRLQPLGTRDGLDWVNDSISTTPKATRAAIDSLAG
                     REVTAIVGGFDRGLDWSDFVAAFKDHAHLRIVAQGANGPRIARALRAAKASVPLGEAE
                     DFADAVAMARTVTPAGGTVLLSPGAPSFDEFKNYAERGRRFAGLAGFDGGVIGGIEGL
                     GIA"
     gene            complement(2656..>3524)
                     /locus_tag="VFM52_08175"
     CDS             complement(2656..>3524)
                     /locus_tag="VFM52_08175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017463140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="endonuclease domain-containing protein"
                     /protein_id="HET8765183.1"
                     /translation="IGGGATAVWIGHSDLIAACAGRTGLPTLNIGRELAPELFELNRL
                     GAWNGHIPVTAVNSAILAVAAILYDFDSITFANERSASAATLEYDGQQVNHQWSKGAI
                     FERLFADWLHAHVAADLHYCSLLRPFAELAVTRSFARLTPYFEVFSSCNRNFKLTGPK
                     PADRWCGQCPKCHFVFLALAPFLPKPRLLSIFGRNLLDDESLAEGFDALLEYHGHKPF
                     ECVGEGAEARAAMYALSQRPEWSEDALVARFRETILPQLDVAQLALEPWLEPSAEHHV
                     PARLAAALKAIG"
BASE COUNT          557 a         1256 c         1177 g          534 t
ORIGIN      
        1 gcagcaccca caggatgacg cccatcacgg cggcagcaat gccgatccac agcaggaaat
       61 accccggcaa ggcgatttcg cccacgatca gcagcagggc aagcatccac cacaggtaat
      121 gtgtcgcgat gggtccgggc atcagtgcgg ctcctcgtca atcggcatgc gcatgcgcgc
      181 aaagagcggc atcggccatc agcgcggcaa tggcggcgcc ggacgcggcg cctgctgctg
      241 gccgagggct tccttcgcca gctcggcgat gccggccatc gcgccgatca cgccggtcgc
      301 ctcgatcggc agcagcagca tcttctggtt cggcgaggcc gccatcgcct tcaacgcctc
      361 gatgtagttg ttggcgacaa agtagttgat cgcgttgacg tcgccgccgg cgatcgcctg
      421 cgacaccatg ctggtcgcct tggcctcggc cagtgcggtg cgctcgcgcg cctcggcggc
      481 gcggaacgcg gcttccttct cgccttcggc ggcgaggatc accgactgct tctcgccttc
      541 ggccttgagg atggccgcct ggcggaaacc ctcggcatcc aggatgttcg cgcgcttctc
      601 gcgctcggcc ttcatctgcc gcgccatcgc atcgaccagg tcgcgcggcg gcgcgatgtc
      661 cttgatctcg atgcggttga ccttcacgcc ccacgggtgc gtggcctcgt cgaccacgcg
      721 cagcagtttg gcgttgatcg cgtcgcgctg gctcagcgac tcgtccaggt ccatcgagcc
      781 gagcacggtg cggatgttgg tcatcaccag cgccagcgcc gcctgttcga ggttcgccac
      841 ctcatacgcg gccttcgccg catccagcac ctggaagaac accacgccgt cgacacgcac
      901 cacggcgttg tccttggtga tgacgtcctg cgaaggcacg tcgagcacca gctccatcat
      961 gttcatcttg cgcccgacgc cctggtagac cgggatcagc aggtgcagcc ccggggtgag
     1021 cgtgcgggtg tacttgccga aggtttccac tgtccattcg taaccctgcg gcacgatgcg
     1081 caccattttc aggatcacga cgatgacgag cactgcaatg atcagcgcca gcaactgtcc
     1141 catggaaccg ctcctttccc cggtgagagc cgcagtatag gcgagccgcc accgcaatcg
     1201 gcgccttcct ccggcgcggc ttgcgccgcc cgcggcgctt tatccgggcg tggcacgacg
     1261 gcaaccggac gatacgccgg caagccgccg ccactcaggc aatgccgagc ccctcgatgc
     1321 caccgatcac gccgccgtcg aagccggcca gcccggcgaa tcggcgccca cgctcggcgt
     1381 agttcttgaa ctcgtcgaag ctcggcgccc ccggtgacaa cagcaccgtg ccgccggccg
     1441 gcgtgaccgt gcgcgccatc gccaccgcat cggcgaaatc ctcggcctcg cccagtggca
     1501 cgctggcctt cgcggcgcgc aaggcccgcg cgatgcgcgg cccgttcgcg ccctgcgcga
     1561 cgatgcgcag gtgcgcgtga tccttgaacg cggcgacgaa atcgctccag tcgaggccgc
     1621 ggtcgaagcc gccgacgatg gccgtgacct cgcgcccggc gaggctgtcg atcgcggcgc
     1681 gggtggcctt cggcgtagtg ctgatcgaat cgttcaccca gtcgaggccg tcgcgcgtgc
     1741 cgagcggctg caggcggtgc ggcagcggat ggaagctggc cagcgccggc gccgcacgca
     1801 ccgcatcgaa accgagcagc tccagcgccg ccagcgcggc gcaggcgttg agcgcgttgt
     1861 gcacgccggg cgcgcgcatg tcggccagcg caaacacggc ctcgtcgcca cgctggatcg
     1921 ccgcgtgccc gacgtgccag gctcccgcgg tgccgaacag gcggcgccgt gggtgcgcgg
     1981 cggtgtgcgc aagcaggttc tcctgggtgc cgttcaccag cagcgtgcgc gacgcatcgg
     2041 cgagtttcag cttgtcggcc acgtagcgcg cggcagagcc gtgccagtcg aggtgctcct
     2101 cgtacaggct ggtgacgacg ccgagttcga ccaggccggc atcgccggtc tggaagctcg
     2161 acagctcgat cacccacaaa tccgccgcct gcccctgcag ggcgagcagc ggcaggccga
     2221 tgttgccggc cagcgcggtg cacacgccga ggccgcgcgc aagatgcgcg agcatcgacg
     2281 tcgtcgtgct cttgcccttg gtgccggtga cggcgacgac gcgcgcctcc gggttctcgg
     2341 caaaccacaa cgccgtgccg gaggtgaaca ccgtgccctg cgcctgcgcg gtggtaatcg
     2401 ccggcttgta gatcgacacg ccgggcgact tcaccaccac gtcgtaggcg gacagcgcaa
     2461 ccgcgtcggg ttcgtgcgga tacacccgga gcgcgccgtc gaacgcgtgc gccgcggcgg
     2521 cttccgcctc gtcgcggcag tacaccgcca gcggcagcgt cggcagcacc gcgcggatcg
     2581 catgaatggc cgcgtgcgcc tcgcgcccga aaccccacac cgcaacgcgc tgccccgcca
     2641 gctcggcgat gcgcatcaac cgatggcctt gagcgccgcg gcgagccgtg ccggcacgtg
     2701 gtgctcggcg gatggctcaa gccatggttc gagcgcgagc tgcgcgacgt cgagctgcgg
     2761 caggatggtt tcgcgaaaac gcgcgaccag cgcatcctcg ctccactccg ggcgctggct
     2821 cagcgcgtac atcgccgcgc gcgcctcggc gccctcgccc acgcactcga acggcttgtg
     2881 cccgtggtat tcgagcagcg cgtcgaaacc ttccgcgagc gattcgtcgt ccagcaggtt
     2941 gcgcccgaag atcgacagca ggcgcggctt gggcaggaac ggcgccagcg caaggaacac
     3001 gaaatggcac ttcgggcact gcccgcacca gcggtcggcc ggcttggggc cggtcagctt
     3061 gaagttgcgg ttgcagctgg aaaacacctc gaaatacggg gtgagcctgg cgaacgaccg
     3121 ggtgaccgcc agctccgcga acgggcgcag cagcgagcag taatgcaggt cggcggcaac
     3181 gtgcgcatgc agccagtcgg cgaacaggcg ctcgaatatg gcccccttgc tccactggtg
     3241 gttgacctgc tggccgtcgt attccagcgt cgcggccgag gccgagcgct cgttcgcaaa
     3301 cgtgatcgaa tcaaaatcgt agaggatcgc cgcgaccgcg aggatcgccg agttcaccgc
     3361 ggtgaccggg atgtgcccgt tccatgcgcc gagccggttc agctcgaaca gctccggcgc
     3421 cagctcgcgg ccgatgttga gcgtaggcag gccagtgcgt ccggcacacg cggcgatcag
     3481 gtcggaatgc ccgatccaca ccgccgttgc cccgccgccg atcg
//
LOCUS       DASSVL010000467         6890 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_603824, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000467 DASSVL010000000
VERSION     DASSVL010000467.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 6890)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6890)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6890
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_603824"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..760
                     /locus_tag="VFM52_08180"
     CDS             <1..760
                     /locus_tag="VFM52_08180"
                     /inference="COORDINATES: protein motif:HMM:NF012698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HET8765184.1"
                     /translation="VDSDGIYRFDNILVDPAAHRLERDGLPVPVEPKAYTVLLTLLRH
                     AGEMVSKDALLDSVWGHHHVSTSVLNRVISQLRRALGDSCAQPRYIATVHSLGYRFIG
                     PLLGTSPAATPPPASSPVVAQPASAAHLPYRRRFADGDQFLNFIDLQPCLNQLANWAA
                     LLPPGDVLRQAILTVLQLEYGGLRESGMAPPTLIYREAVLAALAGNRQVAIDTLARSI
                     DQGSCDELALRRDLAWRSLADDPDFRYQQQRLGG"
     gene            complement(867..1370)
                     /locus_tag="VFM52_08185"
     CDS             complement(867..1370)
                     /locus_tag="VFM52_08185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008436933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8765185.1"
                     /translation="MKRSITVVAIALILAGASGIAAAQNHPDSANMQRVTVTASPGHY
                     ETYEIALDTGFSLQARVGNTHREYMQAWRAATQQEALRAQGMAQEPVVTVAIDNSTGP
                     GQAWQYRLSDQHRNTLAVVNVYCKRANAAGSRCRMVSLPVAGQSSLATLAPGRVPLAQ
                     VQAEPGR"
     gene            1593..3914
                     /locus_tag="VFM52_08190"
     CDS             1593..3914
                     /locus_tag="VFM52_08190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008436940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003729 - mRNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Tex family protein"
                     /protein_id="HET8765186.1"
                     /translation="MPSIEQRIAQDIAAKPEQVRAAVELLDGGATVPFIARYRKEVTG
                     GLDDTQLRLLEERLRYLRELEERRAAILASIEEQGKLSEPLKADILAADTKAALEDLY
                     LPYKPKRRTKAQIAREAGLEPLATGLREDPMLAPEAFAEGFVDAEKGVADVRAALDGA
                     RAILMESIAEDAHLVGELRDWLWDKGQIRAKVIAGKENEGAKFRDYFDHVEPIAKIPS
                     HRLLALMRARNEGVLDIDLEPGADAEQGHLEAEGRVAAHAGINDRGRPADAWLRETVR
                     LTWRVKLHLHLTLDLFGRVREGAEDEAIRVFGANLKDLLLAAPAGAKTVMGLDPGIRT
                     GCKVAVVDATGKLVATTTIYPLEPRRQWNESLAALAQLCIEHAVDLISIGNGTASRDT
                     DRLAGELIKGLAKTDPEHKLAKIVVSEAGASVYSASELAAKEFPGLDVSLRGAVSIAR
                     RLQDPLAELVKIEPKAIGVGQYQHDVNQVKLARALDARVEDCVNAVGVDVNTASAALL
                     ARVAGLSASVAENVVKFRDEHGAFANRKALLKVPRLGDKAFEQCAGFLRVPHGDNPLD
                     ASAVHPEAYPVVERLLAQSGREVRNVIGDTAFLRGLKPEAYTDDQFGLPTVRDILKEL
                     EKPGRDPRPAFVAPSFAEGVEDLKDLQPGMILEGRVTNVAAFGAFVDIGVHQDGLVHV
                     SALSHTFVKDPRDAVKAGDIVKVKVMEVDLPRQRIALSMRLDDEPGQARGKPAAGNDR
                     GGPHQARGNAVPKPAPAPANNAFAEAFARAAKR"
     gene            4018..6036
                     /locus_tag="VFM52_08195"
     CDS             4018..6036
                     /locus_tag="VFM52_08195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019463953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter domain-containing protein"
                     /protein_id="HET8765187.1"
                     /translation="MLRTRHLAGAITAALLFSTAASAATFSKVVVFGDSLSDAGNISL
                     ATAPSIQPPLEFTTNPGHVAMQDLAGSLGYTLAPSLAGGTDYAWGGAGVLTNSPGTPA
                     AVPTITSQVNAYLAAGSADPNALYSIWGGANDIFYAATAAGAGAMAQQLIQQNVAAQI
                     AQLQAAGMTAAQIAALTPTITQQVTTAVTQQVLAGAGVSGFMTADQVQAAIGAAAQQE
                     VKLIGQLQGAGVKNLLVFNLPNIGVTPSGIAQGAAAQEQLTALSVLFNTTLNSGLGQM
                     GKGIIPVNTYALLNEVVANPGAYGFANVTTPACGAGSSSVQCGPQGSGLPYTYAAGTD
                     QNYLFADGVHPTTAAHAMLAQVVLSELAAPGQISLLGEAPLAASAAQTRAVRNQMLAD
                     GTGSDTRVFVNVDYAHQRYDAQAASPKTTSNNVNLTLGVDAKLADHVSAGVALGVGQS
                     NADFAGGGGYQLQDVSGIGYLTYHNGGGYLGGYANFGQANFSDIDRRIAIGNGSRTET
                     GKADGSHLGGGLTGGWWFDFGSLRTGPFATAEWQTVKVSGYSESGNDSTAMWFGRQQR
                     NALIGTVGWRLQGQWQAGATTLAPYVELAWNHDGKADPRTVTAGLNSMNGSFALAGFS
                     PDKTWGTADLGLSARFSQQLSGWVGYSGRFSDNSQKYNSVNLGVKYAF"
     gene            complement(6183..>6890)
                     /locus_tag="VFM52_08200"
     CDS             complement(6183..>6890)
                     /locus_tag="VFM52_08200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007081425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbaY family lipoprotein"
                     /protein_id="HET8765188.1"
                     /translation="RGAIQPSPNAQLTINLVDVSPSQAGAAPIASKTVSTGVTFPYSF
                     ELHFKPEEIKPADLYVVRAILTDGNRHYSMPIQAPVLTNNNKNVATIELQADQTPAEK
                     DLAAFQALVKQIGGMKMTSGTKLDADVSRSWQVFRQDGQVKMIRELVDYGDKGFTSTD
                     FAYRNGAPWVAEQKKKPSQGAAPSQILRASWTENGMLVLHEQQSGSDVSDLSTDAAAT
                     LLRQAKNIYSLAGGNKK"
BASE COUNT         1111 a         2463 c         2288 g         1028 t
ORIGIN      
        1 tgtcgacagc gacgggatct accggttcga caacatcctg gtcgacccgg ccgcccatcg
       61 ccttgagcgc gacgggctgc cggtgccggt ggaacccaag gcctacaccg tcctgttgac
      121 gctgctgcgc catgccggcg agatggtcag caaggatgcg ctgctggaca gcgtctgggg
      181 tcatcaccac gtcagtacca gcgtgctcaa ccgggtgatc tcgcaactgc gccgcgcctt
      241 gggcgactcc tgtgcgcagc cgcgctacat cgccaccgtg cacagcctgg gctaccgctt
      301 catcggccct ctgcttggca cctcgccggc cgccacaccg ccgccggcaa gcagccccgt
      361 cgtcgcccag ccggccagcg cggcgcacct gccctaccgc cgccgcttcg ccgacggcga
      421 ccagttcctg aatttcatcg acctgcagcc gtgcctgaac caactggcga actgggcggc
      481 gctgctgcca cccggcgacg tgttgcgcca ggccatcctc accgtgctgc aattggaata
      541 cgggggccta cgcgagagcg gcatggcgcc gccgacactg atttatcgcg aggcggtgct
      601 cgctgcactc gccggcaatc gacaggtcgc catcgacacg ctggcccggt cgatcgacca
      661 gggttcctgc gacgaactgg cgttgcggcg cgacctggca tggcgttccc tcgcggatga
      721 tcccgacttc cgataccagc agcaacggct cggcggatga ccccgcaacg gcaccatcgg
      781 cattacgcga cgacgaacgc cacggggcga cggccggcag cgtcgccccg tggcgttcgt
      841 ccatcaccgc ttcgagcggc agtccctcag cggcccggct ccgcctgcac ctgtgccagc
      901 ggcacgcggc cgggtgccag cgtcgccagg ctcgactggc cggccaccgg cagcgagacc
      961 atgcggcacc ggctacccgc ggcgttggcg cgcttgcagt agacgttgac gacggccagc
     1021 gtgttgcggt gctgatcgct cagccggtac tgccacgcct gaccggggcc ggtcgaattg
     1081 tcgatggcca ccgtcaccac cggctcctgc gccattccct gcgcgcgcag cgcttcctgc
     1141 tgcgtcgccg cgcgccatgc ctgcatgtac tcccgatgcg tgttgccgac gcgcgcctgc
     1201 aggctgaaac cggtatccag cgcaatctcg taggtctcgt agtggcccgg tgaggcggtg
     1261 acggtgacac gttgcatgtt ggcgctgtcc gggtggttct gcgcagcggc gataccgctg
     1321 gcgccggcga ggatcagcgc gatggcgacg acagtgatcg aacgtttcat gacttcctcc
     1381 agacggacac cagagtccgt ggagcgaaca taggtcggtg cccgcgtgcc cgcttgatgg
     1441 tttgcgccgg aatggtggtg gaaaccccgg gggtttgcgg tggattcgcc gacgaaagcc
     1501 cacgggcaag ctggggcgcg cgctggccgg ggccgtgcgt ggcgcttgct atcatccccg
     1561 gcccgaccaa cccgaaggat ccgcctcgcc ccatgcccag catcgaacag cgcattgccc
     1621 aggacatcgc cgccaaaccc gaacaggtgc gcgccgcagt ggaactcctc gacggcggcg
     1681 cgaccgtgcc gttcatcgcg cgctaccgca aggaggtcac cggcggcctg gacgacacgc
     1741 agctgcgcct gctggaagag cgcctgcgct acctgcgcga gctggaggag cgccgcgccg
     1801 cgatcctcgc cagcatcgag gagcagggca aactgagcga gccgctgaag gccgacatcc
     1861 tcgccgccga caccaaggcc gcgctcgagg acctctacct gccgtacaag ccgaagcgcc
     1921 gcaccaaggc gcagatcgcg cgcgaagcgg ggctggagcc gctggcgacc ggcctgcgcg
     1981 aagaccccat gctcgcgccc gaagcctttg ccgagggctt cgtcgatgcc gagaaaggcg
     2041 tggccgacgt gcgcgccgcg ctcgatggtg cgcgcgcgat cctgatggaa tcgatcgccg
     2101 aggatgccca cctcgtcggc gagctgcgcg actggttgtg ggacaagggc cagatccgcg
     2161 ccaaggtgat tgccggcaag gagaacgaag gcgcgaagtt ccgcgactat ttcgaccacg
     2221 tcgagccgat cgcgaagatt ccctcgcatc gcctgctggc gctgatgcgc gcgcgcaacg
     2281 agggcgtgct cgacatcgac ctggagcccg gcgccgacgc cgagcaaggc catctcgaag
     2341 ccgaggggcg cgtcgccgcg cacgccggca tcaacgaccg cggccggccc gccgacgcgt
     2401 ggctgcgcga aactgtgcgc ctcacctggc gggtgaagct gcacctgcac ctgacgctgg
     2461 atctcttcgg ccgtgtacgc gaaggcgccg aggacgaggc gatccgcgtg ttcggcgcca
     2521 acctcaagga cctgctgctg gccgcgccgg ccggcgcgaa gacggtgatg ggcctcgatc
     2581 ccggcatccg caccggctgc aaggtggcgg tggtcgacgc caccggcaag ctcgtcgcca
     2641 ccaccacgat ctatccgctc gaacccaggc ggcagtggaa cgaatcgctc gccgcgctcg
     2701 cccagctgtg catcgagcac gcggtcgacc tcatctcgat cggcaacggc accgcctcgc
     2761 gcgacaccga ccggcttgcc ggcgaactca tcaagggact ggcgaagacg gatccggaac
     2821 acaagctcgc gaagatcgtg gtcagcgagg ccggtgcctc ggtgtattcg gcctccgagc
     2881 tggcggcgaa ggaattcccc gggctcgacg tcagcctgcg cggcgcggtg tccatcgcgc
     2941 gccgcctgca ggacccgctc gcggagctgg tgaagatcga gcccaaggcg atcggcgtcg
     3001 gccagtacca gcacgacgtc aaccaggtga agctggcgcg cgcgctcgac gcccgcgtcg
     3061 aggactgcgt gaatgccgtc ggcgtcgacg tcaacaccgc ctccgccgcg ctgctggcgc
     3121 gcgtcgccgg actgtccgca tcggtcgccg agaacgtggt gaagttccgc gacgagcacg
     3181 gcgcgttcgc caaccgcaag gcgctgctga aggtgccgcg gctcggcgac aaggcgttcg
     3241 agcagtgcgc cggcttcctg cgcgtgccgc acggcgacaa cccgctcgac gccagcgcgg
     3301 tgcacccgga ggcgtatccg gtggtcgagc gcctgcttgc ccagtccggc cgcgaggtgc
     3361 ggaacgtcat cggcgacacc gcgttcctgc gcggcctgaa acccgaggcc tataccgacg
     3421 accagttcgg cctgccgacc gtgcgcgaca tcctcaagga gctggaaaag cccggccgcg
     3481 acccgcgccc cgcgttcgtc gcgccgagct tcgccgaggg cgtggaggac ctgaaggacc
     3541 tccagcccgg catgatcctc gaaggccgcg tcaccaacgt cgccgcgttc ggcgccttcg
     3601 tggacatcgg tgtgcaccag gatggcctcg tccacgtctc cgcgctctcg catacgttcg
     3661 tgaaagaccc gcgcgacgcg gtgaaagccg gcgacatcgt caaggtgaag gtgatggagg
     3721 tggacctgcc gcggcagcgc atcgcgctgt cgatgcggct cgacgacgag ccgggccagg
     3781 cgcgcggcaa accggcggcc ggcaacgacc gcggcggccc gcaccaggcg cgcggcaacg
     3841 ccgtgccgaa gccggccccg gcgcccgcca acaatgcgtt tgccgaggct ttcgcacgcg
     3901 ccgcgaagcg ctgaatcctg caccgcaagc aaccatgcgg tgcagcatgc ggttccgtat
     3961 ggaatgccgt accgtaacaa ccggttaacg aggccatccc ggccgaggag tgtctccatg
     4021 ttgcgtaccc gccatctggc cggcgcgatc accgccgccc tgctgttcag caccgccgcc
     4081 agcgccgcta ccttcagcaa ggtcgtcgtg ttcggcgaca gcctgagcga cgccggcaac
     4141 atctcgctgg cgaccgcgcc gtcgatccag ccgccactcg agttcaccac caaccccggc
     4201 cacgtggcca tgcaggatct cgctggcagc ctcggctaca cgctggcgcc gtcgcttgcc
     4261 ggcggcaccg actacgcatg gggcggcgcc ggcgtgctca ccaactcgcc cggcacaccg
     4321 gctgcggtgc ccaccatcac cagccaggtg aacgcctacc tcgccgccgg cagcgctgat
     4381 ccgaatgcgc tgtattcgat ctggggcggg gccaacgaca tcttctacgc cgccaccgcc
     4441 gcgggtgccg gcgccatggc acagcagttg atccagcaga acgtcgcggc gcaaatcgcc
     4501 cagctgcagg ccgccggcat gaccgcggcg cagatcgccg ccctcacgcc gacgatcacc
     4561 cagcaggtga ccacggcggt gacccagcag gtactggccg gtgcgggcgt gtccggcttc
     4621 atgaccgccg accaggtgca ggccgcgatc ggcgccgccg cccagcagga ggtgaagctg
     4681 attggccagt tgcagggtgc cggggtgaag aacctgctgg tcttcaacct gcccaacatc
     4741 ggcgtcacgc cgagcggcat tgcccagggc gccgcggcgc aggagcaatt gaccgcgctc
     4801 agcgtgctgt tcaacaccac gctcaacagc ggcctcggcc agatgggcaa gggcatcatc
     4861 ccggtcaaca cctacgcgct cctcaacgag gtcgtggcca accccggcgc ctacggtttc
     4921 gccaacgtca cgacgccggc ctgcggcgcc ggttccagct cggtgcagtg cggcccgcag
     4981 ggttcgggcc tgccgtacac ctacgccgcc ggcaccgacc agaactacct gttcgccgat
     5041 ggcgtgcacc ccacgaccgc cgcgcacgcg atgctcgcgc aggtcgtgct gtccgagctg
     5101 gccgcgcccg gccagatctc gctgctcggc gaggcgccgc tcgccgccag cgccgcgcag
     5161 acccgcgcgg tgcgcaacca gatgctcgcc gatggcaccg gcagcgacac ccgcgtgttc
     5221 gtcaacgtcg actacgcgca ccagcgctac gacgcgcagg cggcttcgcc gaagaccacc
     5281 agcaacaacg tcaacctcac gctgggtgtg gatgcgaagc tcgccgacca cgtctcggcc
     5341 ggcgtcgcgc tcggcgtggg ccagtcgaac gccgattttg ccggcggtgg cggctaccag
     5401 ctgcaggacg tgagcggcat cggttacctg acctaccaca acggcggcgg ctacctgggc
     5461 ggctatgcca acttcggcca agccaacttc agcgacatcg accgtcgcat cgcgatcggc
     5521 aacggctcgc gcaccgaaac cggcaaggcc gacggctcgc acctcggcgg cggcctgact
     5581 ggtggctggt ggttcgactt cggcagcctg cgcaccggcc cgttcgccac cgcggaatgg
     5641 cagacggtga aggtcagcgg ctacagcgaa agcggcaatg acagcacggc catgtggttc
     5701 ggccgccagc agcgcaatgc cctgatcggc accgtcggct ggcgcctgca ggggcagtgg
     5761 caggccggcg cgacgacact tgcgccgtac gtcgagctgg cctggaacca cgacggcaag
     5821 gccgacccgc gcacggtcac tgccggcctc aactcgatga acggcagctt cgcacttgcc
     5881 gggttctcgc cggacaagac ctggggcacg gcggatctcg gcctgtcggc gcgattcagc
     5941 cagcaactca gcggctgggt cggctacagc ggccgcttca gcgacaacag ccagaagtac
     6001 aacagcgtga acctcggcgt gaagtacgca ttctgaccaa ggcgcctggg ccgcggagat
     6061 catcgcgggc agcgcagccc gcgaaaattt ccaaggccca ggtgcttggc gcttcacgcg
     6121 ggcaacgaaa aagccgtcca tttgatggac ggctttttcg ttggtgccca gtgcggcgac
     6181 gcttacttct tgttgccgcc ggcgaggctg tagatgttct tcgcctggcg cagcagcgtg
     6241 gccgcggcgt cggtgctcag gtcgctgacg tcactgccgc tctgctgctc gtgcaggacc
     6301 agcatgccgt tctcggtcca gctcgcgcgg aggatctggc ttggcgccgc gccctggctc
     6361 ggcttcttct tctgctcggc gacccacggg gcaccgttgc ggtacgcaaa gtcggtgctg
     6421 gtgaagccct tgtcgccata gtccaccagc tcgcggatca tcttcacctg gccatcctgg
     6481 cggaacacct gccagctgcg cgacacgtcg gcgtcgagct tggtgccact ggtcatcttc
     6541 atgccgccga tctgcttcac cagcgcctgg aacgcggcca ggtccttctc ggccggcgtc
     6601 tggtcggcct gcagctcgat cgtcgccacg ttcttgttgt tgttggtcag caccggcgcc
     6661 tggatcggca tcgagtagtg gcggttgccg tcggtgagga tcgcacgcac cacgtacagg
     6721 tcggcgggct tgatctcctc cggcttgaag tgcagctcga agctgtacgg gaaagtcacc
     6781 ccggtggaca cggtcttgct ggcgatcggc gcggcacccg cctggctcgg cgacacatcg
     6841 acgaggttga tcgtcaattg cgcattcggc gacggctgga tcgcgccgcg
//
LOCUS       DASSVL010000468         2371 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_491060, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000468 DASSVL010000000
VERSION     DASSVL010000468.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2371)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2371)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2371
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_491060"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..874)
                     /gene="hprK"
                     /locus_tag="VFM52_08205"
     CDS             complement(<1..874)
                     /gene="hprK"
                     /locus_tag="VFM52_08205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017910661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0016791 - phosphatase activity [Evidence
                     IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HPr(Ser) kinase/phosphatase"
                     /protein_id="HET8765189.1"
                     /translation="MALRWPAGMRGEARVLETGIADVRRPSLVGYLNVIYPNKIQIIG
                     SEELGYLDGLDSRQRWEAIHKIAASKPVAIIITRDQSVPSDLREVAEETDTPLWVSAK
                     RGHELLTFLQYHLARLLAAKLTLHGVFMEVFSIGVLITGDSGSGKSELALELISRGHR
                     LVADDATEFTLIAPDVIDGACPELLQDLLEVRGLGIINVREMFGAMSVKPSKYLRLVI
                     HLKPLRDGEDIDALTRLTGDVGHREIFDVKVPMITLPVASGRNLAVLVEAAVRSHALK
                     SKGIDPAQTFIDRQA"
     gene            complement(1092..1415)
                     /gene="raiA"
                     /locus_tag="VFM52_08210"
     CDS             complement(1092..1415)
                     /gene="raiA"
                     /locus_tag="VFM52_08210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007805712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_component: GO:0022626 - cytosolic ribosome [Evidence
                     IEA];
                     GO_function: GO:0045182 - translation regulator activity
                     [Evidence IEA];
                     GO_process: GO:0009386 - translational attenuation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome-associated translation inhibitor RaiA"
                     /protein_id="HET8765190.1"
                     /translation="MQFQLSGQQIEVTPALRAHATAKLDRLTRLDDRLKSLTIVLSVD
                     KLQHRADGTLNVVGTTLHAQAMEGDMYASIDLLFDKLVGQLRRYREKVANKHQRAVRE
                     DRQFG"
     gene            complement(1549..>2371)
                     /gene="rpoN"
                     /locus_tag="VFM52_08215"
     CDS             complement(1549..>2371)
                     /gene="rpoN"
                     /locus_tag="VFM52_08215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017462148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="RNA polymerase factor sigma-54"
                     /protein_id="HET8765191.1"
                     /translation="EQMGEDTPQRALALAIVEGELELLARNDITRLARKLHADEDAVT
                     VATALIRSLNPRPGAALDATPVEYVAPDVYAVKQGSQWQVRLNADAQPRLGLNQHYCS
                     LIARARGEDANWMKGQLQEARWLLKSLESRADTLLKVAGAIVRRQSAFLDYGPEAMRP
                     LVLREVAEEVGMHESTISRVTTRKYLHTPRGTFELKYFFSSGVSTEDGGSASATAIQA
                     MLRKLIDAENPRKPLSDQALADALQRKGINVARRTVAKYREGLRIPSSSERQRAG"
BASE COUNT          329 a          774 c          839 g          429 t
ORIGIN      
        1 gcgcctggcg gtcgatgaag gtttgcgcag ggtcgatgcc cttgctcttg agggcgtggc
       61 tgcgcaccgc cgcctccacc agcaccgcga ggttgcggcc ggaggcgacc ggcagggtga
      121 tcatcggcac cttcacatcg aagatctcgc ggtggccgac gtcgccggtc aggcgcgtca
      181 gcgcgtcgat gtcctcgccg tcgcgcaggg gtttcaggtg gatcaccagg cgcaggtact
      241 tggacggctt gaccgacatc gcgccgaaca tctcgcgcac gttgatgatg cccagcccgc
      301 gcacttcgag caggtcctgc agcagctcgg ggcaggcgcc gtcgatcacg tccggcgcga
      361 tcagggtgaa ctcggtggcg tcgtcggcca ccaggcggtg gccgcggctg atgagctcca
      421 gcgccagctc gctcttgccg gagcccgaat cgccggtgat cagcacgccg atcgagaaca
      481 cctccatgaa cacgccgtgc agcgtgagct tggccgcgag caggcgcgcc aggtgatatt
      541 gcaggaaggt gagcagctcg tggccgcgct tggcgctgac ccacagcggg gtgtcggttt
      601 cctccgcgac ttcgcgcagg tcggacggca ccgactggtc gcgggtgatg atgatggcca
      661 ccggcttgct ggcggcgatc ttgtggatgg cttcccagcg ctggcgcgaa tccagcccgt
      721 ccagataacc cagctcctcc gagccgatga tctggatctt gttcggatag atgacgttga
      781 ggtagccgac cagcgagggc cggcgcacgt cggcgatgcc ggtttccagc acccgcgcct
      841 cgccgcgcat gccggccggc cagcgcagcg ccatgcgttc gctgacgcca tcgaagagtt
      901 gccgagcggt gagccgatcc aagcctgaac ccctgcgtat gggttgcgta cgcagccatt
      961 gtgccagttt tgatcgcctg tggccggcac gcgacgggcc gcgcacgcca tgcgtacgcg
     1021 gcccgtcatc agtcgagtgg agatgcgctg caacccgccg gttggatgcg gcctgccgcg
     1081 caggggctgg gttagccgaa ctggcgatcc tcgcgcaccg cacgctggtg cttgttcgcc
     1141 accttctcgc ggtagcggcg cagctggccg accagcttgt cgaacaggag atcgatcgac
     1201 gcgtacatgt cgccttccat cgcctgtgcg tgcagggtgg tgcccacgac gttcagggtg
     1261 ccatcggcgc gatgctgcag cttgtccacc gacagcacga tggtgaggct tttcaaccgg
     1321 tcgtcgaggc gggttaggcg gtcgagcttg gcggtggcgt gcgcgcgcag cgctggggtg
     1381 acctcgatct gctgaccgct gagttggaat tgcatgatgc gcctcctctg gtggtactgg
     1441 ccgctcgtcg cggccggatg ggcgcgcccc ggatgtcgga ccggtgcgcg tcgtgaatca
     1501 tcctgtgtgc agatggtggg aacgttttcg gcggttgcaa gttccccttc aacccgcgcg
     1561 ctggcgttcg ctggaactgg gaatgcgcag cccttcgcgg tatttcgcca cggtgcgccg
     1621 cgcgacgttg atgcccttgc gttgcagcgc gtcggccagc gcctggtcgg acagcggctt
     1681 gcgcgggttc tcggcgtcga tcagcttgcg cagcatggcc tggatcgcgg tggcggacgc
     1741 gctgccgccg tcctcggtgg aaaccccgct ggaaaagaaa tacttgagct cgaaggtgcc
     1801 gcgcggcgta tgcaggtact tgcgcgtggt gacgcgcgag atggtggact cgtgcatgcc
     1861 gacttcctcg gccacctcgc gcagcaccag cgggcgcatc gcctcggggc cgtagtcgag
     1921 gaacgcgctc tgccggcgca cgatcgcgcc ggccaccttg agcagggtat cggcgcgcga
     1981 ttcgaggctc ttgagcagcc agcgcgcctc ctgcagctgg cccttcatcc agttggcgtc
     2041 ctcgccgcgc gcgcgcgcga tcaggctgca atagtgttgg ttgaggccca gccgcggctg
     2101 cgcgtccgcg ttcagccgca cctgccactg gctgccctgc ttgaccgcgt agacgtccgg
     2161 ggcgacgtat tcgaccggcg tcgcgtcgag cgccgcaccg ggacgcgggt tcaggctgcg
     2221 gatgagcgcg gtggcgacgg tgacggcgtc ctcgtcggcg tgcagcttgc gtgcgagcct
     2281 ggtgatgtcg ttgcgcgcga gcagttccaa ctcgccctcg acgatcgcca gcgccagcgc
     2341 gcgctgcggc gtgtcctcgc ccatttgctc g
//
LOCUS       DASSVL010000469         4150 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_166087, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000469 DASSVL010000000
VERSION     DASSVL010000469.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 4150)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4150)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4150
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_166087"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(97..411)
                     /locus_tag="VFM52_08220"
     CDS             complement(97..411)
                     /locus_tag="VFM52_08220"
                     /inference="COORDINATES: protein motif:HMM:NF016162.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF427 domain-containing protein"
                     /protein_id="HET8765192.1"
                     /translation="MANPPRPQPWISDLHEPPRAPSPSIGSGFFDQPHEEKVMRAMWQ
                     GRVTAESDRTIVVEGNHYFLPGSLRREHLRESSRHSVCSWKGTASYFDVVIGEQLNAD
                     AS"
     gene            complement(483..1337)
                     /locus_tag="VFM52_08225"
     CDS             complement(483..1337)
                     /locus_tag="VFM52_08225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015449097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HET8765193.1"
                     /translation="MDELSELMRHLRLQTRVFYRVTHCGQWVVDGEYERKAMFHLVAT
                     GRCVMRHGGSAGDVILQAGDAVLFNRPLDHCLIASLDADGDVPTLLLCGYFEFDSPLS
                     EVLLASLPAELLLRHNPQPGDTAAGAPAALLQLIVAEAESNGPGAMVLMDKLSDALFM
                     YALRQCLAAGTVAEGLLTAIFDPYLGPALLAIHRDPQHPWTVAVLADKVHLSRAAFAR
                     RFAHSTGTTPMGYVTGLRMQQAKSALAERGVSVAEAAVLAGYATEAAFSRAFKRLFGY
                     SPGASRSP"
     gene            1479..2036
                     /locus_tag="VFM52_08230"
     CDS             1479..2036
                     /locus_tag="VFM52_08230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007512445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HET8765194.1"
                     /translation="MSEFTLHTPDTAPAAARNLLLGAQKQLGFVPNLYAHLANAPAAL
                     EAYFGLSAQFDKTSFNPIERQVVLLAASVENGCEFCVAAHSVIARKMAKAPDAVVDAL
                     RNRTILPDTRLEALAQFTRSMVKERGWVAGAPLQAFRKAGFTHQQALEVVLGVTMKTL
                     SNYANHLTGTETNEQFAGEAWKRPA"
     gene            2233..2553
                     /locus_tag="VFM52_08235"
     CDS             2233..2553
                     /locus_tag="VFM52_08235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007512443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EthD family reductase"
                     /protein_id="HET8765195.1"
                     /translation="MIKISVMYPHATEARFDHAYYRDKHMPLVKRRMGESCRYYSIDK
                     GLAGGAPGTAPTYVAVSHIFCDSVEAFQTGFGPHAAELMADIPNFTDITPVIQASEVL
                     VERG"
     gene            2657..3103
                     /locus_tag="VFM52_08240"
     CDS             2657..3103
                     /locus_tag="VFM52_08240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007512441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8765196.1"
                     /translation="MSWALLGLRLSIFLVMLMWTLDKFVRPEHSAGVFAHFYAIAGFG
                     NAAFLAIGAMELVLLLAFVVGFARRYSYGVVLLLHAASTLSAWHQYAHPYEGIHLMFF
                     AAWSMLVGCAALYLLRDADALTVDAARARPAVPERPRASPMEARPA"
     gene            3100..3804
                     /locus_tag="VFM52_08245"
     CDS             3100..3804
                     /locus_tag="VFM52_08245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008436377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018784 - (S)-2-haloacid dehalogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006805 - xenobiotic metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="haloacid dehalogenase type II"
                     /protein_id="HET8765197.1"
                     /translation="MTRPGTTRPEIAVFDAYGTVFDVHSAVTRLADVIGPEAPRISAL
                     WRQKQLEYSWTHALMQRYVDFWQLTQAALDYALASVGQGDSATRARLLDAYRTLDAYP
                     EVAAVLDGYRDAGLRVAVFSNATPDMLDRALDAAQLRARVDAVFSAHALARYKPDPRV
                     YDAAAEAFGVPAGAIAFHSSNAWDAAGAAACGWPARWINRGGMAAEYAMLSVPAVRDL
                     TQARHAFLDHPSAGPD"
BASE COUNT          751 a         1372 c         1335 g          692 t
ORIGIN      
        1 ctcatgggcg ccttgcctca ggggtcgacc ctgacctcgt gccagaaggc gacgtaactg
       61 cggatctcgg cagcgtccgc cttggggtga gggtagttac gaagcatcgg cgttgagctg
      121 ctcaccgatg accacgtcga agtagctggc cgtgcctttc caggaacaca ccgaatgccg
      181 gctgctctca cgcaaatgct cgcgtcgaag cgatcccggc aggaaatagt gattgccttc
      241 gaccacgatc gtgcgatcac tctcggcagt cacacggcct tgccacatgg cacgcatgac
      301 cttctcttca tgcggctggt caaaaaaacc ggaaccgatg ctgggtgaag gcgcgcgcgg
      361 cggttcatgt aggtctgaaa tccatggctg cggacgcggg ggattggcca tgggtttctc
      421 gctgccgcgc gacgccctca gtcgatagcg ccaccggacc ggtggaagga ttcaacggag
      481 cgtcatggcg atcgcgaagc gcccggcgaa taaccgaaga ggcgcttgaa ggcgcggctg
      541 aatgccgcct ccgtcgcgta gccggcgagc acggccgcct cggccacgct gacgccgcgt
      601 tcggccagcg ccgacttcgc ctgctgcatg cgtaggccgg tgacgtaccc catcggggtg
      661 gttccggtcg agtgggcaaa tcgccgggca aacgccgccc gcgacagatg caccttgtcg
      721 gcgagcacgg ccaccgtcca ggggtgctgc ggatcgcgat ggatggccaa cagcgctggg
      781 cccaggtagg gatcgaagat cgccgtcaac agcccctccg cgacggtacc ggcggccaga
      841 cactgccgca gcgcatacat gaacagcgca tcggaaagct tgtccatcaa caccatggcg
      901 ccagggccat tcgattccgc ctccgccacg atcaactgca aaagggccgc cggcgcgccg
      961 gcagcagtgt cgccgggctg cgggttgtgg cgaagcagca gctcggccgg caacgaagcc
     1021 agcaacacct ccgacaacgg cgagtcgaac tcgaagtagc cgcacagcag cagcgtggga
     1081 acgtcgccgt cggcatcgag cgaggcgatc aggcaatggt cgagcgggcg gttgaacagc
     1141 accgcatccc cagcctggag aatgacgtcg ccggcactgc ccccatggcg catcacgcag
     1201 cgaccggtgg ccaccaggtg gaacatcgcc ttgcgctcgt actcgccatc gaccacccac
     1261 tgcccgcaat gcgtgacccg atagaacacg cgcgtctgca ggcgcaggtg acgcatcaat
     1321 tcgctcagtt cgtccacggc gactccacgt caagacgcga agacaagcat gcacgcgttg
     1381 cggacatggt tgcgctcgcg atcgaaggcc aaagtatgcc catggccagc ccgtcattcg
     1441 accggctgag cggccattca tcccaaggag tatgaaccat gagcgaattc accttgcaca
     1501 cgcccgacac cgccccggca gccgcacgca acctgctgct gggcgcgcaa aagcagctgg
     1561 gcttcgtacc caacttgtat gcccacctcg ccaatgcgcc ggccgcgctg gaagcctact
     1621 tcgggctgtc cgcgcagttc gacaagacgt cgtttaaccc gattgagcgc caggtggtgt
     1681 tgctcgccgc cagtgtcgag aacggctgcg agttctgtgt cgcagctcat tcggtgatcg
     1741 cccgcaagat ggccaaggcg cccgatgccg tcgttgacgc actgcgcaac cgcactatct
     1801 tgcccgacac ccgcctggag gcattggccc agttcacccg cagtatggtg aaggaacgcg
     1861 gctgggtggc aggcgcgccg ctgcaagcct tccgcaaggc cggcttcacc caccagcagg
     1921 cgcttgaagt cgtgcttggc gtgaccatga agacgctcag caattacgcc aaccacctga
     1981 ccgggaccga gaccaacgaa cagtttgccg gcgaggcctg gaagcgcccg gcgtaacgcc
     2041 cttgacgcac tcttgctcac caggcaagca atgcttcggc tgggcgggcg gtaccgggag
     2101 aagagggagg gcggcccgaa ccggttgccc tgagcgaaag catgatcggt gcggcgcatc
     2161 ctagcagtcg gccgcctcag agcagactcc cggtgcacgc aaggcgcctc aaccatgaac
     2221 cccaggaaga ccatgatcaa gatcagcgtg atgtaccccc atgcgacgga ggcccgattc
     2281 gaccacgcgt attaccgtga caagcacatg ccgctggtga aacggcgcat gggcgagagc
     2341 tgccggtatt actcgatcga caaggggctg gccggaggcg cgcctgggac ggcaccgacc
     2401 tacgtcgccg tgagccatat cttctgcgac tcggtggaag ccttccagac cggtttcggg
     2461 ccgcacgccg cagagctgat ggccgatatc cccaacttca ccgacatcac gccggtgata
     2521 caggccagcg aagtcctggt ggagcgcggc tagcaaaccg ggtccggcca gatgccacga
     2581 caagcgaaac cccgaccggc caaccgccgt cctccgtcca ccatcggaga tacatgtcat
     2641 gaatttaccg agacgattga gttgggcgct gctcggcctg cgcctgtcga tcttcctcgt
     2701 gatgctgatg tggacgctgg acaagttcgt ccggcccgaa cacagcgccg gcgtgttcgc
     2761 ccacttctac gccatcgccg gcttcgggaa cgccgctttc ctcgcgatcg gggcgatgga
     2821 gctggtgctt ctgctggcct ttgtcgtcgg attcgcacgg cgctacagct atggcgtggt
     2881 gctgcttctg catgccgcct cgacgctgtc cgcatggcat caatatgcgc acccctacga
     2941 aggcatccat ctgatgttct tcgccgcgtg gtcgatgctt gtcgggtgcg cggcgctcta
     3001 tctgctgcgc gacgccgatg ccctgaccgt ggatgcggcg cgcgccaggc cggccgttcc
     3061 tgagcggccc cgcgccagcc cgatggaggc acgaccagca tgacccggcc cggcacgacc
     3121 cgacccgaga ttgcggtatt cgacgcctac ggcacggtgt tcgacgtgca ttcggcagtg
     3181 acgcgcctgg ccgacgtgat cggccccgag gcaccgcgga tctccgcact ctggcggcag
     3241 aagcagctcg aatacagctg gacccacgcg ctgatgcaac gctatgtgga tttctggcag
     3301 ctgacccagg cggcactgga ctacgccctg gccagcgtag ggcagggcga cagcgccacc
     3361 cgcgcccgcc tgctcgacgc ctaccgcacg ctcgatgcgt atccggaggt ggctgcggtg
     3421 ctggatggct accgcgacgc cggcctgcgc gttgcggtgt tctccaacgc cacgccggac
     3481 atgctcgacc gcgcgctcga tgccgcccag ctgcgagcac gggtcgatgc cgtgttctcg
     3541 gcgcatgcgc tggcacgcta caaacccgat ccgcgcgtgt acgatgcggc ggccgaggca
     3601 ttcggcgtgc cggccggagc catcgcgttc cattcctcca acgcctggga cgccgccggc
     3661 gctgccgcat gtggctggcc agcgcgctgg atcaaccgcg gcggcatggc agccgaatac
     3721 gccatgcttt ccgtgccggc ggtgcgcgac ctgacgcagg cgcgacacgc gtttctcgac
     3781 cacccttctg ccggacctga ttagcgtcga gtctcagtag gtgagcaggg ggtggggtaa
     3841 gcatggcgac ctggtccgag cagaggggtt gccatgccca tgaatcgcgt gcagttccaa
     3901 cccggcctgt cgttgccggc tttcttcagg cgctatggca ccgaggagca gtgcctgcag
     3961 gcatggatta tgtagctcag ctggttagag cacggcactc ataatggatt gtgtcccacc
     4021 gcttggtgta actccggtcc ccgtaggcgt cgggtcgggt tgggcagcgg tggtcagttt
     4081 gccatggcgg gaagctcggc ggcgggttga tcggtgagga cgtcgttcaa cgtgtcgcgc
     4141 ggcatgtagc
//
LOCUS       DASSVL010000470         3235 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1112345,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000470 DASSVL010000000
VERSION     DASSVL010000470.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3235)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3235)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3235
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1112345"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(301..537)
                     /gene="metJ"
                     /locus_tag="VFM52_08250"
                     /pseudo
     CDS             complement(301..537)
                     /gene="metJ"
                     /locus_tag="VFM52_08250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005224385.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="met regulon transcriptional regulator MetJ"
     gene            complement(947..1342)
                     /gene="gcvH"
                     /locus_tag="VFM52_08255"
     CDS             complement(947..1342)
                     /gene="gcvH"
                     /locus_tag="VFM52_08255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010368686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0019464 - glycine decarboxylation via
                     glycine cleavage system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system protein GcvH"
                     /protein_id="HET8765198.1"
                     /translation="MSEIPGDLKFNKSHEWARVEDDGIVRVGISDHAQEQLGDLVYVE
                     LPEIGSRVEAGNAAAVLESVKAASDIYSPVSGEVVEVNELLSDKPETINADAFGEGWI
                     FAVRLSDRGELDNLLDAKAYEELIEHDDH"
     gene            complement(1413..2513)
                     /gene="gcvT"
                     /locus_tag="VFM52_08260"
     CDS             complement(1413..2513)
                     /gene="gcvT"
                     /locus_tag="VFM52_08260"
                     /EC_number="2.1.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007807608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004047 - aminomethyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0019464 - glycine decarboxylation via
                     glycine cleavage system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system aminomethyltransferase
                     GcvT"
                     /protein_id="HET8765199.1"
                     /translation="MTEKTVLNATHRALGAHMVDFGGWDMPVNYGSQIEEHHAVRRDA
                     GMFDVSHMTIVDLHGARVKDFLRHLLANSIDKLKVTGKALYSCMLNDEGGVIDDLIVY
                     YLGDTFFRTVVNAATRAKDLAWITRQAQAFDVEVKERPELSMIAVQGPHARAKVLALV
                     HEVDRARIEKLAKFTAAAAQGPGGMPLFVARTGYTGEDGFEIMLPAEHTLAFWEALRA
                     AGVVPCGLGARDTLRLEAGMNLYGQDMDETVSPWEANLGWTIALDAGRDFIGRKALEA
                     QKAAGVARHMVGLVLDGKGVLRHGQKVLTANGEGVILSGSFAPTLDKAIAFARIPVGE
                     PGAVRVDIRGRELPVHIVKYPFVRDGKPCEGI"
     gene            complement(2671..>3235)
                     /gene="cysC"
                     /locus_tag="VFM52_08265"
     CDS             complement(2671..>3235)
                     /gene="cysC"
                     /locus_tag="VFM52_08265"
                     /EC_number="2.7.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007080622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004020 - adenylylsulfate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006790 - sulfur compound metabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="adenylyl-sulfate kinase"
                     /protein_id="HET8765200.1"
                     /translation="SKAERTQLMNHRPAVLWFTGLSGAGKSTIANLVEKRLHALGYHT
                     YLLDGDNVRHGINKDLGFTPADRVENIRRIGEVAHLMVDAGLVVLVSAISPYRSERRS
                     VRERFTEGEFVEVFVDTPLAECEARDPKGLYRKARAGEIRNFTGIDAPYEAPESPEVH
                     LQTAGTRAQQLAEQLATRLLDRIAARP"
BASE COUNT          482 a         1115 c         1051 g          587 t
ORIGIN      
        1 ggcggcggca ggcttcttgg cagcggcctt cttcgccgca ggcttcttgg cgaccttctt
       61 cgccgtggtc ttcttcgcag ccgccggctt cttggcggca gacttcttcg ccgccggctt
      121 gcgggcggtc ttcttcgcgg cagccttctt cacagccgcc ttcttggcgg ccggcttctt
      181 cgccaccggc ttcttcgcgg cggccttctt ggcgacggtc ttcttcgcga ccgtcttctt
      241 cacggccgcc ttcttggcag cggccggctt ctttgcagcg ggtttcttgg cagtggtaac
      301 catggttcgt ctcagctcct catcggttgg cagtggttgc ccagtaaaag cgtggaggaa
      361 cgcctccacc agcaagtcgc tgttggtggc gtgccgcaga tttttcacct ggcgttcggt
      421 gcgcaggtcg gaaagcgttc gcagtacatg cagcggaatc gagaccgtga tcttgcgcac
      481 cgcgttcgcc ttctcgccgt gctcgacata cggtgcgatg tatttcggtg ttgccatgtt
      541 gccgttcccc gtgaacttgg gcgaaagcta ttccgcaggg tagccgctgt caatggattt
      601 tggccggcaa atcaagccgt ttcgcaccac cggtcgcgcg catgccggca ccgccatcga
      661 aaacccgttg ccgacggtcg catcgtgcag acgtctggac gtccaaatgt cactggccgg
      721 caaaaccgca atggcaagcg aaagggctgg aaacaagggg tttcgcgcgc ctcggcacaa
      781 aaaccggcct tgccatcgcc ctggtcggcg caacacgacg cgtgatacgt gccgaccgcg
      841 ccggtgagat gaacggagcg cgaccaccgc gccggtcgat gtgccgcccg cggacacgaa
      901 gacggccgca cacggcggcc gtcttcggac gaacagtgga accggctcag tgatcgtcgt
      961 gctcgatcag ctcctcgtac gccttcgcat cgagcaggtt gtcgagctcg ccgcgatcgc
     1021 tgaggcgcac cgcgaagatc cagccttcgc cgaacgcgtc ggcgttgatc gtctccggct
     1081 tgtcggagag cagctcgttg acctcgacca cctcgcccga caccggcgag tagatgtccg
     1141 aggcggcctt gaccgactcc agcaccgccg ccgcattgcc ggcctcgacg cgcgagccga
     1201 tctccggcag ttcgacgtac accaggtcgc caagctgctc ctgcgcatgg tcggaaatgc
     1261 ccacgcgcac gatgccgtcg tcctcgacgc gtgcccactc gtgggatttg ttgaatttca
     1321 ggtcgccggg gatctcgctc atgatcgggt ccagtttcgg gtcaggggac aggcggccat
     1381 tctagccgca agggaacgcg cgcaagtggt cttcagatgc cttcgcacgg cttgccgtcg
     1441 cgcacgaacg gatacttcac gatgtgcacc ggcaactcgc ggccgcggat gtcgacgcgt
     1501 accgcgcccg gctcgccgac cgggatgcgg gcgaacgcga tcgccttgtc cagcgtcggc
     1561 gcgaagctgc cggaaaggat cacgccctcg ccgttcgcgg tgagcacctt ctggccgtgg
     1621 cgcagcacgc ccttgccgtc cagcaccagg ccgaccatgt ggcgggcaac ccctgccgcc
     1681 ttctgcgcct cgagcgcctt gcggccgatg aagtcgcggc ctgcgtccag cgcaatcgtc
     1741 cagccgaggt tcgcctccca cggcgacacg gtttcgtcca tgtcctggcc gtagaggttc
     1801 atgccggcct cgagccgcag cgtgtcgcgc gcaccgaggc cgcacggcac cacaccggcc
     1861 gcgcgcagcg cttcccagaa cgccagcgtg tgctcggccg gcagcatgat ctcgaagccg
     1921 tcctcgccgg tgtagccggt gcgggcgacg aacagcggca tgccgcccgg cccctgcgcc
     1981 gccgccgcgg tgaacttcgc gagcttctcg atccgcgcgc gatccacctc atgcaccagc
     2041 gccagcactt tcgcgcgcgc atgcggaccc tgcaccgcga tcatcgacag ctcggggcgc
     2101 tccttcacct cgacgtcgaa cgcctgcgcc tgccgggtga tccacgcgag atccttggcg
     2161 cgcgtcgccg cattgacgac cgtgcggaag aaggtgtcgc cgaggtagta cacgatgagg
     2221 tcgtcgatca ccccgccctc gtcgtttaac atgcacgagt acagcgcctt gccggtgacc
     2281 ttgagcttgt cgatgctgtt ggcgagcagg tggcgcagga aatccttcac ccgcgcgccg
     2341 tgcaggtcga cgatggtcat gtgcgagacg tcgaacatgc cggcgtcacg gcgcaccgcg
     2401 tgatgctcct cgatctgcga accgtagttg accggcatgt cccaaccgcc gaagtcgacc
     2461 atgtgcgcgc cgagcgcgcg gtgggtggca ttcagtacgg tcttctcggt catcgcggga
     2521 cgccttgggg gaggaagggc ggccattatc ggtcccgccg ccgcaccgcg tcatcctgca
     2581 cggcatcacg tcccggcaaa gccccctccg cagccgggaa acccgcttgc gggcgccggc
     2641 ctcgaaagac gcacgcccgc gagcggactc ctacggccgg gcagcgatgc ggtccagcaa
     2701 tcgggtggcc agctgctcgg ccagctgctg ggcacgcgtg cccgcggtct gcaggtgcac
     2761 ctccgggctc tccggcgcct cgtagggtgc gtcgatgccg gtgaagttgc ggatctcgcc
     2821 ggcgcgggcc ttgcggtaca ggcccttcgg gtcgcgcgcc tcgcattcgg cgagcggggt
     2881 gtcgacgaac acctcgacga actcgccttc ggtgaagcgc tcgcgcaccg agcggcgctc
     2941 gctgcggtac ggcgagatcg cgctgaccag cacgaccagc ccggcgtcca ccatcaggtg
     3001 cgccacctcg ccgatgcggc ggatgttctc cacgcgatcg gccggggtga agccgagatc
     3061 cttgttgatg ccgtggcgca cgttgtcgcc gtcgagcaga taggtgtggt agcccagcgc
     3121 gtgcaggcgc ttctccacca ggttggcgat ggtcgacttg ccggcgccgg agaggccggt
     3181 gaaccacagt accgcgggcc tgtggttcat cagttgcgtc cgttcggcct tgctg
//
LOCUS       DASSVL010000471         3109 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1056106,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000471 DASSVL010000000
VERSION     DASSVL010000471.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3109)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3109)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3109
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1056106"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            170..2653
                     /locus_tag="VFM52_08270"
     CDS             170..2653
                     /locus_tag="VFM52_08270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017354609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase"
                     /protein_id="HET8765201.1"
                     /translation="MAILMPFLSILVAGAFAAYHRWRLATWVALSAALLVACGLLGAS
                     ATATVAAAVLLALVAVPLLVPSIRKPLVTAPLLKFYTRILPPLSDTERTALESGTVGF
                     EGQLFSGKPDWTQLLSQPKPALTAEEQAYLDGPCEQLCRMTDDWDITHVRADLPPEMW
                     EFVKREKFFGLNIPKEYGGLGFSALMNHKVIQKLASISSVVSSTVGVPNSLGPAELLM
                     HYGTDEQKAHYLPRLADGREVPCFALTGPFAGSDATSIPDYGIVAMGEWGGAQVLGIR
                     LTLNKRYITLAPVATLVGVAFRMYDPDGLLGDKRDIGISLALVPADTPGLEIGRRHFP
                     LNTPFQNGPIHGDGVFVPLSQLIGGEDYAGKGWQMLMECLSIGRSITLPSTASGGTTM
                     AAVVTGAYARIRKQFGLSIGRFEGVQEALARIAGKAYATSALSQATAAAVTRGENPAV
                     PSTIAKYHCTEMGREVVKDAMDVHGGKGIILGPRNYLGRGWQATPISITVEGANIMTR
                     SLMIFGQGAILCHPWVLKEMKAAQLDDAQARVDQFDAALFGHIGFAISNAVRAFWFGL
                     TFAKVGAAPRDDYTRRFYRKLNRYSATLAVMADTSMLMLGGKLKFKESLSGRLGDVLS
                     QLYICSAMLKRYEDEGRPEGDQPLLAWAIHDAVNRMETALSGALRNFPIRPVGWLLWL
                     LVFPLGRRAQAPGDRLSRRAAALLMTPCDARARLADGVFLTPCANNPAGRIDSYLPKV
                     VLAEPVERKFLKALKHSDIEALDFPAQLDEGVREGWITAEERAQLEELRAMTLDAITV
                     DDFEPWELRASSYYGDFGRDDATERRDVA"
     gene            complement(2712..>3109)
                     /locus_tag="VFM52_08275"
     CDS             complement(2712..>3109)
                     /locus_tag="VFM52_08275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8765202.1"
                     /translation="SVSGDIVLRGRLVGEVHAETVSGDITIDSRGERVRRLSTGTVSG
                     DADVRVGLAECGEIRSETVSGGIRLRLPKNLSARVSGESFSGDLSAPDAKVRTEEFGP
                     GKTLDARYGSGAGDIRMESFSGDAILTFE"
BASE COUNT          465 a         1117 c         1063 g          464 t
ORIGIN      
        1 ggccacggct gaagttccat acgccataga cagcaatagt acgcgcaacg gagcgttccg
       61 gcgggctgct tgcgggcctt gccggcccat ggcaacatcc ataccatacc gtatggaaca
      121 gccggtgcac actgcgtgcc ggcgcccacc gaccctggag ccccagcgca tggccatcct
      181 gatgccgttc ctgtccatcc tcgtggccgg cgcgttcgcc gcgtaccacc gctggcgcct
      241 cgccacctgg gtcgcgctct cggcggcact gctggtggcc tgcggcctgc tcggcgccag
      301 cgccaccgcg acggtcgcgg cggcggtgct gctggcgctg gtcgccgtcc cgctgctggt
      361 gccttcgatc cgcaagcccc tggtgacggc cccgctgctg aagttctaca cgcgcatcct
      421 gccgccgctg tccgacaccg agcgcaccgc gctggagtcg ggcacggtcg gcttcgaggg
      481 ccagctgttc tcgggcaagc ccgactggac ccagctgctc tcgcagccca agcccgcgct
      541 caccgcggag gaacaggcct acctcgacgg cccgtgcgag cagctgtgcc gcatgaccga
      601 cgactgggac atcacccacg tgcgcgccga cctgccgccg gagatgtggg agttcgtcaa
      661 gcgcgagaag ttcttcggcc tgaacatccc gaaggaatac ggcggcctcg gcttctcggc
      721 gctgatgaac cacaaggtca tccagaagct ggcgtcgatc tcgtcggtgg tgagctcgac
      781 cgtcggcgtg ccgaactcgc tcggcccggc cgagctgctg atgcactacg gcaccgacga
      841 gcagaaggcg cactacctgc cgcgcctggc cgacggccgc gaggtgccct gcttcgcgct
      901 gaccggcccg ttcgcgggct ccgacgccac ctcgatcccc gactacggca tcgtcgcgat
      961 gggcgaatgg ggcggtgcgc aggtgctcgg catcaggctc acgttgaaca agcgctacat
     1021 cacgctcgcg ccggtggcca cgctggtcgg cgtcgccttc cgcatgtacg acccggacgg
     1081 gctgctcggc gacaagcgcg acatcggcat ctcgctcgcg ctggtgccgg ccgacacgcc
     1141 cgggctcgag atcgggcgcc gccacttccc gctcaacacg ccgttccaga acggcccgat
     1201 ccacggcgac ggcgtgttcg tgccgctgtc gcagctgatc ggcggcgagg actacgccgg
     1261 caagggctgg cagatgctga tggagtgcct gtcgatcggc cgttcgatca ccctgccctc
     1321 caccgccagc ggcggcacca cgatggcggc ggtcgtgacc ggcgcgtacg cgcgcatccg
     1381 caagcagttc ggcctgtcga tcgggcgctt cgagggcgtg caggaagcgc tggcgcgcat
     1441 cgccggcaag gcctacgcga cgagcgcgct gtcgcaggcc acggccgcgg cggtgacgcg
     1501 cggcgagaac ccggcggtgc cgtcgacgat cgccaagtac cactgcaccg agatgggccg
     1561 cgaggtcgtc aaggacgcga tggacgtgca cggcggcaag ggcatcatcc tcggcccgcg
     1621 caactacctc ggccgcggct ggcaggcgac gccgatcagc atcaccgtcg agggcgcgaa
     1681 catcatgacg cgctcgctga tgatcttcgg ccagggcgcg atcctgtgcc atccgtgggt
     1741 gctgaaggaa atgaaggccg cgcagctgga cgatgcgcag gcgcgcgtcg accagttcga
     1801 cgccgcgttg ttcggccaca tcggctttgc aatctccaac gccgtgcgcg cgttctggtt
     1861 cggcctgacc ttcgcgaagg tcggcgccgc gccccgcgac gactacacgc gccgcttcta
     1921 ccgcaagctc aaccgctact ccgccacgct ggcggtgatg gccgacacct ccatgctgat
     1981 gctgggcggc aagctcaagt tcaaggaatc gctctccggc cggctcggcg acgtgctcag
     2041 ccagctctac atctgcagcg ccatgctgaa gcgctacgag gacgagggcc gcccggaagg
     2101 cgaccagccg ctgctggcgt gggccatcca cgatgccgtc aacaggatgg aaaccgcgct
     2161 gtccggcgcg ctgcgcaact tccccatccg cccggtgggc tggctgctgt ggctgctcgt
     2221 gttcccgctc ggccgccgcg cgcaggcgcc gggcgaccgg ctgagccgcc gcgccgccgc
     2281 gttgctgatg acgccgtgcg acgcgcgtgc gcggctggcg gatggcgtgt tcctgacgcc
     2341 ctgcgccaac aacccggcgg gccgcatcga cagctacctg ccgaaggtgg tgctggccga
     2401 gccggtggag cgcaagttcc tcaaggcgct caagcacagc gacatcgagg cgctggactt
     2461 cccggcgcag ctcgacgagg gcgtgcgcga gggctggatc accgcggagg agcgcgcgca
     2521 actggaggaa ctgcgggcga tgaccctcga cgcgatcacg gtcgacgact tcgaaccgtg
     2581 ggaactgcgc gcctcgtcgt actacggcga cttcggccgc gacgacgcca ccgagcgccg
     2641 cgacgtcgcg tagcgccgac ccacggtcgg ctccgtccgg aaaagcgggc cgaccatggg
     2701 tcggctccac gtcattcgaa agtgaggatg gcgtcgccgc tgaaggattc catgcggatg
     2761 tcgcccgcgc cgctgccgta gcgagcgtcg agggtcttgc cggggccgaa ctcctcggtg
     2821 cgcaccttcg cgtccggagc ggacaggtcg ccgctgaagg attcgccgct cacccgggcc
     2881 gacaggtttt tcggcaggcg cagccggatc ccgccgctga cggtttccga cctgatctcg
     2941 ccgcactcgg ccaggccgac gcgcacgtcc gcgtcgccgg acacggtgcc ggtgctgagg
     3001 cggcgcacgc gttcgccgcg gctgtcgatg gtgatgtcgc cggacaccgt ctcggcatgc
     3061 acttcgccga cgaggcggcc gcggagcacg atgtcgccgc tcaccgact
//
LOCUS       DASSVL010000472         4019 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_646261, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000472 DASSVL010000000
VERSION     DASSVL010000472.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 4019)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4019)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4019
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_646261"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(182..2458)
                     /gene="uvrD"
                     /locus_tag="VFM52_08280"
                     /gene_synonym="mutU"
                     /gene_synonym="recL"
     CDS             complement(182..2458)
                     /gene="uvrD"
                     /locus_tag="VFM52_08280"
                     /gene_synonym="mutU"
                     /gene_synonym="recL"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014648867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0006268 - DNA unwinding involved in DNA
                     replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase II"
                     /protein_id="HET8765203.1"
                     /translation="MDVSYLIDPLNDAQREAVCAPPGHYLVLAGAGSGKTRVLTHRIG
                     WLLQVERVPSWAILAVTFTNKAAGEMRARLDSLIPGGTQGLTVGTFHGIAHRLLRRHW
                     HEAGLPEGFQIIDADDQQRLVKRVITGLGLDEAKFPHRQATWTINGWKDEGKRPDAIE
                     HHDHPVTATLVRIYRAYEDACRRAGLVDFAELLLRAHELWLKNPAVLEHYQQRWRHLL
                     IDEFQDTNALQYAWIRVLSGARQQTGKADRAAGETPAPIQAGQVFAVGDDDQSIYGWR
                     GARVENMQQFLRDFPGARTIKLEQNYRSTATILAAANSVIARNGGRLGKNLWTAGDDG
                     ERIALYAAYNEQDEARFVTDRIREYVAEHGHARDCAILYRSNAQSRNFEEQLNQFKVK
                     YRVYGGVRFFERAEVKDALAYLRLTANRHDDAAFERAVNTPPRGIGERTLDTLRRRAR
                     GADTSLWEAALAELTGGELAGRAKNAVKGFLAMIDGMARTFHSLAPGDTGEEERAEAA
                     LTLAEQIEHVLAQTGLRDHYEKDTRGNGEARVENLDELVNVAGRFERTQEDIDAGLDE
                     LSAFLSRAALEAGEGQGEAYEDCVQLMTLHSAKGLEFPLVFLVGMEEGLFPSQRSTED
                     ESRLEEERRLAYVGITRAREKLVVSYAESRRMHGTELLQRPSRFLAEMPAELIDEVRP
                     HVQVSRPVYAGRDGGAVPTWREDPGVQLGQRVNHPSFGDGVVIAAEGSGPHLRLQVNF
                     EDAGSKWLVAAYANLTPL"
     gene            complement(2503..2721)
                     /locus_tag="VFM52_08285"
     CDS             complement(2503..2721)
                     /locus_tag="VFM52_08285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007514121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8765204.1"
                     /translation="MRLFLILLGIALVALGVWITLGHATYDQTDTLIQIGTARLTATH
                     ARVIPVWVGIAGIVAGVLAALIGGFRKR"
     gene            complement(2985..>4019)
                     /locus_tag="VFM52_08290"
     CDS             complement(2985..>4019)
                     /locus_tag="VFM52_08290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017910344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase"
                     /protein_id="HET8765205.1"
                     /translation="KQLKAILFDELGLPVKLKTPGGQPSTNEEALEAIADAHPLPRLI
                     LDYRALAKLRSTYTDKLPAMVNPRTGRVHTSYHQGAVVTGRLSSSDPNLQNIPARTEE
                     GRRIRQAFIAPEGWCVLAADYSQIELRIMAHLSRDANLLKAFHDGGDIHRATAAEVLG
                     LAPDEVTREQRRAAKAINFGLMYGMSAFGLARQLGIDRGEASDYMARYFARYPGVHAF
                     MEATREQAKRNGYVETIYGRRLYLDNLTARNAAIRAGAERAAVNAPMQGSAADIIKRA
                     MIAVASWLHERDDAHMLMQVHDELVFEVRKDAVDAIREGVSARMQGAAELAVPLLVGI
                     GVGANWDEAH"
BASE COUNT          560 a         1351 c         1435 g          673 t
ORIGIN      
        1 ccgagcccgg ccagcagcgc cgcgctgccg gcgtcccagg cattgggcag cagcagggtg
       61 tgctggcggt catgcagcgc gcggaactgc cgcgcgcggg cgacttgggt ggactgatcc
      121 atgcatcgac tcctcgaaag accgcaatgg ctgacaaacc gctgttatgc accagcggcg
      181 ctcacagtgg cgtgaggttg gcgtacgcgg ccaccagcca cttgctgccg gcgtcctcga
      241 aattcacctg caggcgcaga tgcgggccgc tgccctcggc ggcgatcacc acgccgtcgc
      301 cgaagctcgg gtggttcacg cgctggccaa gctgcacgcc cgggtcctcg cgccaggtcg
      361 gcaccgcgcc gccatcccgg ccggcataca ccgggcggct cacctgcacg tgcgggcgca
      421 cctcgtcgat cagctcggcg ggcatttcgg ccaggaagcg cgatggccgc tgcagcagct
      481 cggtgccgtg catgcggcgc gactcggcgt agctcaccac cagcttctcg cgtgcacggg
      541 tgatgccgac gtaggcgagg cggcgctctt cttccagccg gctctcgtcc tcggtggagc
      601 gctggctggg gaacaggcct tcctccatgc cgaccaggaa caccagcggg aactccaacc
      661 ccttcgccga gtgcagcgtc atcagctgca cgcaatcctc gtaggcctcg ccctggccct
      721 cgccggcctc gagcgcggcg cgcgaaagga aggccgaaag ctcgtcgagc ccggcgtcga
      781 tgtcctcctg cgtgcgctcg aagcggcctg cgacgttgac cagctcgtcc aggttttcca
      841 cccgcgcctc gccgttgccg cgcgtgtcct tctcgtagtg gtcgcgcaac ccggtctggg
      901 cgaggacgtg ttcgatctgt tcggcgagcg tgagcgccgc ttcggcccgc tcttcttcac
      961 cggtgtcgcc aggagcgagg gagtggaagg tgcgggccat gccgtcgatc atcgcgagga
     1021 aacccttcac cgcattcttc gcgcggccgg cgagttcgcc gccggtgagc tcggcgagcg
     1081 cggcttccca cagcgaggtg tcggcgccgc gggcgcggcg gcgcagggtg tcgagcgtgc
     1141 gttcgccgat gccgcgcggc ggggtgttca ccgcgcgctc gaaggcggcg tcgtcgtggc
     1201 ggttggcggt gaggcgcagg taggccagcg cgtccttcac ctcggcgcgc tcgaagaagc
     1261 gcacgccgcc gtacacgcgg tatttcacct tgaactggtt gagctgctcc tcgaagttgc
     1321 gcgactgcgc gttggagcgg tagaggatgg cgcagtccct cgcgtggccg tgttcggcga
     1381 cgtactcgcg gatgcggtcg gtgacgaagc gcgcctcgtc ctgctcgttg tacgcggcgt
     1441 acagcgcgat acgctcgcca tcgtcgcccg ccgtccacag gttcttgccc agccgcccgc
     1501 cgttgcgcgc gatcacgctg ttggcggcgg cgaggatggt cgccgtcgag cggtagttct
     1561 gctccagctt gatcgtgcgc gcgccgggaa aatcgcgcag gaactgctgc atgttctcca
     1621 cccgcgcgcc acgccagccg tagatcgact ggtcgtcgtc gccgacggcg aacacctggc
     1681 cggcttggat gggggcaggc gtttcgcctg ccgcgcgatc agccttgccg gtctgctgcc
     1741 gggcacccga cagcacgcgg atccacgcgt actgtagcgc gttggtgtcc tggaactcgt
     1801 cgatcagcag gtgccgccag cgctgctggt aatgctccag cacggccggg ttcttcagcc
     1861 acagctcgtg ggcgcgcagc agcagttcgg cgaagtcgac caggccggcg cggcggcagg
     1921 cgtcctcgta ggcccggtag atgcgcacca gggtcgcggt gaccgggtgg tcgtggtgtt
     1981 cgatcgcgtc ggggcgcttg ccttcgtcct tccagccgtt gatcgtccat gtggcctggc
     2041 ggtgcgggaa cttcgcctcg tccagcccga gcccggtgat cacgcgcttc accaggcgct
     2101 gctggtcgtc ggcgtcgatg atctggaagc cttccggcag tccagcttcg tgccagtgcc
     2161 ggcgcagcag gcggtgagcg atgccgtgga aggtgccgac cgtcagccct tgtgtgccgc
     2221 cggggatcag gctgtccagc cgcgcgcgca tctcgccggc ggccttgttg gtgaaggtga
     2281 cggcgaggat cgcccacgac ggcacgcgct ccacctgcag cagccagccg atgcggtggg
     2341 tcagcacgcg ggtcttgccc gagccggcgc cggccagcac cagatagtgg ccgggcggcg
     2401 cgcacacggc ttcgcgctgg gcgtcgttga gcggatcgat cagatacgaa acatccatcg
     2461 catcgattgt accgatgctg tccagcacgc cgttgtcggc ggtcagcgct tgcggaaacc
     2521 gccgatcagc gccgccagca cgccggcgac gatgccggcg atgccgaccc acaccgggat
     2581 caccctcgcg tgcgtggcgg tgagcctggc cgtgccgatc tggatcagcg tatcggtctg
     2641 gtcatatgtc gcgtggccga gcgtgatcca cacgccaagc gcgacgaggg cgatgccgag
     2701 caggatcagg aacaggcgca tgcgggtgtc cacggctggg aggtcgccag tatgccgaca
     2761 aaaaaggccc cgaaagccag ggggtgcttt cggggccggg gaggcgtcac ccaggggata
     2821 ggtttcgcgc tccggtggct gtccagggag gtgagcagcc gggacgccgt tgcgtgcgtc
     2881 cggggtatag gaacgcgccg gcgcggaaaa gttctacacg cggcgcgaaa aaaagtcaga
     2941 ttcggttcat ttcacgcgca cgcaacaaat gcgcggccgc cggctcagtg cgcctcgtcc
     3001 cagttggcgc cgacaccgat gccgaccagc agcggcaccg cgagctcggc ggcgccctgc
     3061 atgcgggcgc tgacgccttc acggatggcg tcgacggcgt ccttgcgcac ctcgaacacg
     3121 agctcgtcgt gcacctgcat cagcatgtgc gcgtcgtcgc gttcgtgcag ccaggacgcc
     3181 acggcgatca tcgcgcgctt gatgatgtcg gccgcgctgc cctgcatcgg cgcgttcacc
     3241 gccgcgcgct cggcgccggc gcggatcgcg gcgttgcgtg cggtgagatt gtccaggtac
     3301 agccggcggc cgtagatggt ttccacgtag ccgttgcgct tggcctgctc gcgcgtagcc
     3361 tccatgaacg cgtgcacgcc ggggtagcgc gcgaaatagc gcgccatgta gtcgctggct
     3421 tcgccacggt cgatgccgag ctggcgggcg aggccgaacg cgctcatgcc gtacatcagc
     3481 ccgaagttga tcgccttggc cgcgcggcgc tgctcgcgcg tcacctcgtc gggcgccagg
     3541 ccaagcacct cggcggcggt ggcgcggtgg atgtcgccgc cgtcgtggaa cgccttgagc
     3601 aggttcgcgt cgcgcgacag gtgcgccatg atgcgcagct cgatctgcga gtagtcggcg
     3661 gcgagcacgc accagccctc cggcgcgatg aacgcctggc ggatgcgtcg gccttcctcg
     3721 gtgcgcgccg ggatgttctg caggttggga tcggacgagg acagccggcc ggtgaccacc
     3781 gcgccctggt ggtagctggt gtgcacgcgg ccggtgcgtg ggttgaccat cgccggcagc
     3841 ttgtcggtgt aggtcgagcg cagtttcgcc agcgcgcggt aatcgaggat cagccgcggc
     3901 agcgggtgcg cgtcggcgat cgcttcgagc gcttcctcgt tggtcgacgg ctggccgccc
     3961 ggcgtcttca gcttcaccgg caggccgagc tcgtcgaaca ggatcgcctt gagctgctt
//
LOCUS       DASSVL010000473         2075 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_335900, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000473 DASSVL010000000
VERSION     DASSVL010000473.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2075)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2075)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2075
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_335900"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1482
                     /locus_tag="VFM52_08295"
     CDS             <1..1482
                     /locus_tag="VFM52_08295"
                     /inference="COORDINATES: protein motif:HMM:NF013793.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HET8765206.1"
                     /translation="SHLIELGKDASQKAQVVAKFKNDHNIITGREAPLIQEQITQVST
                     DLINARAQLAALRGRYDTARNSDPETLAAVLGSQTINRLREQEAQIGAQRAALASNYV
                     ANNPTLGRLNAQYSDVERKIRQEAQRMVASLKSDIQSQEASVQSLTTRLGELHQQIGA
                     TNDAMAMLIPLQRGADAAADMYDTYARTLRQTDASMLIPATTVRVAARSEVPIAPSFP
                     NNMIMLPASTLIAFGIAGMIGWLRETNRKGLVSMNQVEVVLDLPTLGMLPRFDSHNEV
                     IYLDAVEQLFNRLWLMDRPRSILITSARPEEGKTTTAWALAKAAADRDIRVLLIDADM
                     RSGRKMHAARSVSVTGLADILRGQADMRDVVQRNPHSDNLTLLPAGHPKGIPTRLLAL
                     DSFNRLLETSSRDYDLVLIDSPPSFVGGDCWLLSQKVDKTVLIAKWGSTTAQEIHEAV
                     RMQLHRDTFAGVVLNMVNPRQNVRYGHPDSMYLSREITRYYRS"
     gene            1479..1856
                     /locus_tag="VFM52_08300"
     CDS             1479..1856
                     /locus_tag="VFM52_08300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8765207.1"
                     /translation="MNAGGSGGGNTAPVTWLLPAAVFVVLLGLWATPANSAQWYRVND
                     KKGECERASRTDQPSPDDYMDYLQKQNQYRSKEVSRDFTGRAQIVTVTDTSNHQMTFY
                     VDEDSCQQALRRQQRIGGSARAR"
     gene            1875..2051
                     /locus_tag="VFM52_08305"
     CDS             1875..2051
                     /locus_tag="VFM52_08305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8765208.1"
                     /translation="MNKPPPAHDKPVVAVAKLASRRKREAEALRANLHKRKDQARARE
                     KAEASVICGRIEPP"
BASE COUNT          427 a          689 c          654 g          305 t
ORIGIN      
        1 tcgcacctga tcgaactggg caaggatgct tcgcagaagg cgcaggtcgt cgccaagttc
       61 aagaacgacc acaacatcat caccggccgc gaagcaccgc tgatccagga gcagatcacc
      121 caggtcagca ccgacctgat caacgcccgc gcacagcttg ccgcattgcg cggccgctac
      181 gacacggcgc gcaacagcga tcccgagacg ctggccgcgg tgctcggttc gcagaccatc
      241 aaccgcctgc gcgagcagga ggcgcagatc ggtgcgcagc gtgccgcgct ggcgtcgaac
      301 tacgtggcga acaatccgac cctgggccgg ctgaatgcgc aatacagcga cgtcgagcgc
      361 aagatccgcc aggaggcgca gcgcatggtg gccagcctga agagcgacat ccagtcgcag
      421 gaggcctcgg tgcagtcgct gaccacgcgg ctcggtgaac tgcatcagca gatcggcgcg
      481 accaatgatg cgatggcgat gctgatcccg ctgcagcgcg gcgccgatgc ggcggccgac
      541 atgtatgaca cctacgcccg gacgctgcgc cagaccgacg cctcgatgct gatcccggcc
      601 accacggtgc gcgtggcggc ccgctccgag gtgccgatcg cgccgtcgtt ccccaacaac
      661 atgatcatgc tgccggcctc gacgctgatc gcgttcggca tcgccggcat gatcggctgg
      721 ctgcgcgaga ccaaccgcaa gggcctggtg agcatgaacc aggtggaggt ggtgctggac
      781 ctgccgacgc ttggcatgct gccgcggttc gacagccaca acgaggtgat ctacctcgac
      841 gcggtcgagc aactgttcaa ccggctgtgg ctgatggacc ggccgcgcag catcctgatc
      901 acctcggcgc gtccggagga aggcaagacc accaccgcct gggcgctggc caaggccgcc
      961 gccgaccgcg acatccgggt gctgctgatc gatgcggaca tgcgctcggg gcggaagatg
     1021 cacgccgccc gcagtgtcag cgtgaccggc ctggccgata tcctacgcgg acaggccgat
     1081 atgcgcgacg tggtgcagcg caatccgcac agcgacaacc tgaccctgct gccggcaggg
     1141 catcccaagg gcattccgac ccggctgctg gcgctcgaca gcttcaaccg gctgctcgag
     1201 acctccagcc gggactatga cctggtgctc atcgacagcc cgcccagctt cgtcggcggc
     1261 gactgctggc tgttgagcca gaaggtcgac aagaccgtgc tgatcgccaa gtggggctcc
     1321 accacggcac aggagatcca cgaggcggtg cgcatgcaac tgcaccgcga caccttcgcc
     1381 ggcgtggtgc tcaacatggt caacccgcgg cagaacgtcc gctatggcca cccagactct
     1441 atgtatctct cgcgcgagat cacccgatac tacaggtcat gaatgcaggg ggcagcggcg
     1501 gcgggaacac cgcgccggtt acctggctgc tgcctgcagc agtcttcgtg gtcctgttgg
     1561 gcctgtgggc aaccccagcc aatagcgccc aatggtatcg ggtcaacgac aagaagggcg
     1621 agtgcgagcg tgcaagtcga accgatcagc cgagtcccga cgactacatg gactacctgc
     1681 agaaacagaa tcagtaccgg tcaaaagagg tctctcgcga cttcaccgga cgagcccaga
     1741 ttgtcaccgt taccgatacc agcaaccatc aaatgacatt ttatgtggat gaggactcct
     1801 gccagcaggc actccgacgg cagcagcgaa ttggcggctc cgcacgggcg aggtaaagtc
     1861 cccggcaggt tgccatgaac aagccaccac cggcgcacga caaacccgtc gttgctgttg
     1921 ccaagctcgc ctctcgccgg aagcgcgaag cggaggcgct gcgcgccaat ctgcacaagc
     1981 gtaaggatca ggcacgcgca cgggaaaaag ccgaagcttc ggtgatttgt ggccgaatcg
     2041 agccaccgtg acgctactat gggcgaaacc atagc
//
LOCUS       DASSVL010000474         2028 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_618292, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000474 DASSVL010000000
VERSION     DASSVL010000474.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2028)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2028)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2028
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_618292"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..414)
                     /locus_tag="VFM52_08310"
     CDS             complement(<1..414)
                     /locus_tag="VFM52_08310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008433719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase"
                     /protein_id="HET8765209.1"
                     /translation="MYTLYYAPGSANLVVHLALIEIGARYELRKIDIEKGEQRTPEYL
                     AINPLGVVPTLIVDGTAHTEAASLAMLLAERHPDAHLAPAVGGAQRADYLQWMFYLAN
                     NLQPLFRQWFFPADHLPEAAESLKQASRIGIEKCWT"
     gene            complement(458..>2028)
                     /locus_tag="VFM52_08315"
     CDS             complement(458..>2028)
                     /locus_tag="VFM52_08315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015448721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HET8765210.1"
                     /translation="ARYHQLLGENDLAALGDVQQAIEARHGWDLDRRVAGVLERLELP
                     GDADFAALSGGMKRRVLLAQALVAQPDVLLLDEPTNHLDIEAIDWLEGFLKSFAGTLL
                     FITHDRRFLQALATRIVEIDRGALTDWPGDYANYLRRREERLHAEEQANAHFDKRLAQ
                     EEAWIRQGIKARRTRNEGRVRALKALRVERAQRRELTGKARMTAATARASGKKVIELE
                     HVHQAFGTQVLFDDLSTTIMRGDRVGIVGPNGAGKSTLIRILLGELAPQRGTVTLGTG
                     IELAYFDQHRVQLDDTLNALDNVAEGREYIELNGQRKHIIGYLQDFLFSPERARAPIT
                     RLSGGERNRLLLAKLFAQPSNLLVMDEPTNDLDVETLELLEELLTDYRGTLLLVSHDR
                     AFLDNVVSSTLVLEGGGKVGEYVGGYSDWLRQRPAPAVATEPAAARSAAPEPAPTPTP
                     KRKLSYKDQRELEQLPARIEALETDIAARGAAMNAPGFFQQDSAAIVAANDALATLQA
                     ELDAAYVRWSELDG"
BASE COUNT          264 a          667 c          746 g          351 t
ORIGIN      
        1 ggtccagcac ttttcgatgc cgatgcgcga ggcctgcttg aggctttcgg ccgcttccgg
       61 caggtggtca gccgggaaga accactggcg gaacagcggc tgcaggttgt tggcgaggta
      121 gaacatccac tgcaggtaat cggcgcgctg ggcaccgccg acggccggcg cgagatgcgc
      181 gtccgggtgc cgttcggcga gcagcatcgc cagtgaggcc gcctcggtgt gcgcggtgcc
      241 gtcgacgatc agcgtcggca ccacgccgag cgggttgatc gcgaggtact cgggggtgcg
      301 ctgctcgccc ttctcgatgt cgatcttcct gagctcgtag cgcgcgccga tctcgatcag
      361 cgccaggtgc acgacgaggt tggcggagcc gggggcgtag tagagcgtgt acatggcgcg
      421 ttccttgggg tgggcttggc gatgatacgc ggcgtgctca gccgtcgagc tccgaccagc
      481 gcacgtaggc ggcatccagc tcggcctgca gggtcgccag cgcgtcgttc gcggcgacga
      541 tcgcggcgct gtcctgctgg aagaaccccg gcgcgttcat tgccgcgccg cgcgccgcga
      601 tgtcggtttc gagcgcctcg atgcgtgccg gcagttgttc gagttcgcgc tggtccttgt
      661 agctcagctt gcgttttggc gtcggcgtcg gggcaggttc gggcgcggcc gacctggcgg
      721 cggccggttc cgtggcgacg gcgggcgcgg gtcgctggcg cagccagtcg ctgtagccgc
      781 cgacgtattc gcccaccttg ccgccgcctt cgagcaccag cgtgctggac accacgttgt
      841 cgagaaacgc gcggtcatgg gagaccagca gcagggtgcc gcggtaatcg gtcagcagct
      901 cctccagcag ttccagcgtc tccacgtcga ggtcgttggt gggctcgtcc atcaccagca
      961 ggttggacgg ctgcgcgaac agcttggcca gcagcaggcg gttgcgctcg ccgccggaga
     1021 gccgggtgat cggcgcgcgg gcgcgctcgg gcgagaacag gaaatcctgc aggtagccga
     1081 tgatgtgctt gcgctgcccg ttgagctcga tgtactcgcg gccctcggcc acgttgtcca
     1141 gcgcgttcaa ggtgtcgtcg agctgcacgc ggtgctggtc gaagtacgcc agctcgatgc
     1201 cggtgccgag ggtgacggtg ccgcgctgcg gcgcgagttc gccgagcagg atgcggatca
     1261 gcgtgctctt gccggcgccg ttcggcccca cgatgccgac ccggtcgccg cgcatgatgg
     1321 tggtggacag gtcgtcgaac aggacctgcg tgccgaacgc ctggtgcacg tgctccagct
     1381 cgatcacctt cttgccggaa gcccgcgccg ttgccgccgt catgcgtgcc ttgccggtga
     1441 gctcgcggcg ctgcgcgcgc tcgacgcgca gcgccttgag cgcgcgcacg cggccctcgt
     1501 tgcgcgtgcg ccgggccttg atgccttggc gaatccacgc ttcctcctgc gccagccgct
     1561 tgtcgaagtg cgcgttggcc tgctcctcgg catgcaggcg ctcctcgcgc cggcgcaggt
     1621 agttggcgta gtcgcccggc cagtcggtga gcgcgccgcg gtcgatttcg acgatgcgcg
     1681 tcgccagcgc ctgcaggaag cggcggtcgt gggtgatgaa cagcagcgtg ccggcgaacg
     1741 acttgaggaa gccttcgagc cagtcgatcg cctcgatgtc gagatggttg gtcggctcgt
     1801 ccagcagcag cacgtcgggc tgcgcgacca gcgcctgcgc cagcagcacg cgccgcttca
     1861 tgccgccgga gagcgcggcg aaatcggcgt cgcccggcag ttcgagccgt tccagcacgc
     1921 cggcgacgcg gcggtcgaga tcccagccgt ggcgcgcctc gatcgcctgc tgcacgtcgc
     1981 ccagcgcggc gaggtcgttt tcgcccagca gctggtggta acgcgcga
//
LOCUS       DASSVL010000475         2698 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1366620,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000475 DASSVL010000000
VERSION     DASSVL010000475.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2698)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2698)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2698
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1366620"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(116..907)
                     /locus_tag="VFM52_08320"
     CDS             complement(116..907)
                     /locus_tag="VFM52_08320"
                     /EC_number="3.2.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007509793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008714 - AMP nucleosidase activity
                     [Evidence IEA];
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA];
                     GO_process: GO:0044209 - AMP salvage [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AMP nucleosidase"
                     /protein_id="HET8765211.1"
                     /translation="MKDKQEIVANWLPRYTGTPLEAFGDYILLTNFAHYVDLFAEWHG
                     VEVQGREHPMPNVTADGITLINFGMGSPNAATVMDLLSAVRPKAALFLGKCGGLKKKN
                     QLGDLILPIAAIRGEGTSNDYLPPEVPALPAFQLQRGVSTMIRDLGHDYWTGTVYTTN
                     RRVWEHDDQFKAYLRRTRCMAIDMDTATIFSAGFANGIPCGALLLVSDQPMIPEGVKT
                     TASDRKVTEKYVDAHVRIGIEALKLVRRNGRSVKHLRFGDIDEDE"
     gene            1069..2013
                     /locus_tag="VFM52_08325"
     CDS             1069..2013
                     /locus_tag="VFM52_08325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007809975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DegV family protein"
                     /protein_id="HET8765212.1"
                     /translation="MRMGVAMDAACDLPQAFIAEHGIAVLPIAVKVDTDTFMDNRDPA
                     EIQRFIDRRLGSRSHSAETEPTSAEDVQKLFLDKLVLEQDCVFCLTMTATRSPIHDNV
                     VRASFAVLRNYREKREPLGVNGPFLMRVIDTRNIFAGAAPAIWEAAHLVATDQPPATI
                     RERLNYVANHSYGYLVPRDLYYLRARAKKKNDRSVGLFSAMLGSALDIKPILRCFQGE
                     TGPVGKARGFEQGAQMLFDYAARRVRAGLVVPVVCVSYGGDLAVLEHLPGYDGLRAAC
                     AETNTSLLESPMSITGMVNVGEGAVSLGLAAEDHVAEF"
     gene            complement(2110..>2698)
                     /locus_tag="VFM52_08330"
     CDS             complement(2110..>2698)
                     /locus_tag="VFM52_08330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016903673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HET8765213.1"
                     /translation="YALAADLADAEDRLAVFDWVSDLGLPLSLLVNNAGGNVPRAALD
                     YGVEEYRAIFELNLFAAFEMSRLAHPHLVQHAHAAIVNVGSVSGITHVRTGAPYGMSK
                     AALHQLTRNLAAEWAVDGIRVNAVAPWYIRTRRTDEALADEDYLEEVLDRTPLKRVGE
                     PEEVAAAITFLCLPAASYITGQVLGVDGGFLHYGF"
BASE COUNT          436 a          890 c          930 g          442 t
ORIGIN      
        1 attcatacgc gccaatccgc aatgagttgc gcaaacgaaa ccggggccag agcgcggcgt
       61 ccatgcgtgg acactgcgcc ccggccccgg tttcagcgcc ggtttcggcc gccgctcact
      121 cgtcctcgtc gatatccccg aaccgcaagt gtttgacgct gcggccattg cgacgcacga
      181 gcttgagggc ctcgatgccg atgcgtacgt gggcgtcgac gtatttttcg gtcaccttgc
      241 ggtcgctggc ggtggtcttc accccctcgg gaatcatcgg ctggtcggac accagcagca
      301 gcgcaccgca cgggatgccg ttggcgaagc ccgccgagaa gatcgtcgcg gtatccatgt
      361 cgatcgccat gcagcgggtg cggcgcagat aggccttgaa ctggtcgtcg tgctcccaca
      421 cccgccggtt ggtggtgtag acggtgccgg tccagtagtc gtgaccgagg tcgcggatca
      481 tggtggagac accacgctgc agctggaacg ccggcagcgc cggcacctcg ggcggcaggt
      541 agtcgttcga ggtgccttcg ccgcggatgg cggcgatcgg caggatcaaa tcgccgagct
      601 ggttcttctt cttgagcccg ccgcacttgc cgaggaacag cgcggccttg ggccggaccg
      661 cgctcagcag atccatcacg gtggcggcgt tcgggctgcc catgccgaag ttgatgaggg
      721 tgatgccgtc ggcggtgacg ttgggcatcg ggtgctcgcg accctgcacc tccacgccgt
      781 gccattcggc aaagaggtcc acgtagtggg cgaagttggt gagcaggatg tagtcgccga
      841 aggcttcgag cggggtgccc gtgtagcgcg gcagccagtt ggcgacgatc tcttgtttgt
      901 ctttcatggt gcggcctggt tcgatgagcc tccgcgtgcg gagggtgcca gcgacgccac
      961 gccggcagga aacgcgatgg gatcgcccat tatgtccggt tgccgcattg cgccggtacc
     1021 cgccgcgcgc atgctatgtt gaagccgtca caccaagggg gacgacacat gcgcatggga
     1081 gttgccatgg acgccgcctg cgacctgccg caggcgttta ttgccgaaca cgggatcgcc
     1141 gtcctgccga tcgcggtcaa ggtcgacacc gataccttca tggacaaccg cgacccggcc
     1201 gaaatccagc ggttcatcga ccgccggctg ggcagccgca gccactcggc ggaaaccgag
     1261 ccgacctcgg ccgaggacgt gcagaagctg ttcctggaca agctggtgct cgaacaggat
     1321 tgcgtgttct gcctgaccat gaccgccacg cgcagcccga tccacgacaa cgtggtgcgc
     1381 gcgagcttcg cggtgctgcg caactaccgc gagaagcgcg agccgctcgg cgtgaacggg
     1441 ccgttcctga tgcgcgtgat cgacacccgc aacatctttg ccggcgcggc accggcgatc
     1501 tgggaagccg cacacctggt ggccaccgac cagccgccgg ccacgatccg cgagcgcctg
     1561 aattacgtgg ccaaccacag ctacggctac ctggtaccgc gcgacctgta ctacctgcgc
     1621 gcccgcgcca agaagaagaa cgaccgcagc gtgggcctgt tcagcgcgat gctggggtcg
     1681 gcactggaca tcaagcccat cctgcgctgt ttccagggcg agacggggcc ggtgggcaag
     1741 gcgcgcggct tcgaacaggg cgcgcagatg ctgttcgact acgccgcgcg ccgggtgcgt
     1801 gccggcctgg tggtaccggt ggtgtgcgtg agctacggcg gcgacctcgc cgtgctcgaa
     1861 cacctgccgg gctacgacgg cctgcgtgcc gcatgcgcgg agaccaacac cagcctgctg
     1921 gaatcgccga tgagcatcac cggcatggtc aacgtcggcg aaggcgcggt gtcgctgggg
     1981 ctggccgccg aggaccacgt ggcggagttt tgatccacct gctctcgtgg gtcgggatcc
     2041 atcccggtcc gccctgcgtc gaacaccgcg atcgtcgggc acaagcccga cccgcaaggc
     2101 ctttgccgat cagaagccgt agtgcaggaa accgccgtcc acgcccagca cctggcctgt
     2161 gatgtagctc gcggccggca ggcacaggaa ggtgatcgcg gcggccactt cctccggctc
     2221 gccgacgcgc ttgagcgggg tgcggtcgag cacctcttcg aggtaatcct cgtcggccag
     2281 cgcctcgtcg gtgcgccggg tgcggatgta ccacggcgcc accgcgttga cgcggatgcc
     2341 gtccaccgcc cactcggcgg cgaggttgcg cgtgagctgg tgcagcgcgg ccttgctcat
     2401 gccgtacggt gcgccggtgc gcacgtgggt gatgccggac accgaaccca cgttgacgat
     2461 cgccgcgtgc gcgtgctgca ccaggtgcgg atgcgcgagc cggctcatct cgaaggcggc
     2521 aaacaggttc agctcgaaga tcgcgcggta ctcctcgacg ccgtaatcga gcgctgcgcg
     2581 cggcacgttg ccgccggcgt tgttgaccag gagcgacagc ggcaggccca ggtcgctgac
     2641 ccagtcgaac acggccaggc gatcctcggc atcggcgagg tcggcggcca gcgcgtag
//
LOCUS       DASSVL010000476         2510 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_986177, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000476 DASSVL010000000
VERSION     DASSVL010000476.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2510)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2510)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2510
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_986177"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..263)
                     /locus_tag="VFM52_08335"
     CDS             complement(<1..263)
                     /locus_tag="VFM52_08335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015448757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial assembly protein"
                     /protein_id="HET8765214.1"
                     /translation="MAHVNLLPWRAERRKLREREFYGQLGAAFVAGLGFVLLWAIWMS
                     ARIDNQNDRNTILQDEIKQVDVKIATIKALEKVREHLLARKQI"
     gene            complement(263..1348)
                     /locus_tag="VFM52_08340"
     CDS             complement(263..1348)
                     /locus_tag="VFM52_08340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007974443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly protein PilM"
                     /protein_id="HET8765215.1"
                     /translation="MPRGKGGNTVGLFTPKKPALIGVDISSTAVKLLQLSQAGNRYRV
                     ENYAVEPLPPNAVVEKNIVEVEAVGEAIRRALARSGSKLKHAAAAVAGSAVITRIIPM
                     ASELTEDDLEGQIQVEANQYIPYPIDEVSLDFEVMGPVRDNPEMNNVLLAASRTENVD
                     MRVAALELGGLTAKVIDVEAFAMENAFALLTDQLNVGRDALVAVVDIGATMTTLSVLR
                     NQRTIYSREQVFGGKQLTDEIMRRYGLSYEEAGRAKRKGGLPESYASEVLDPFKESLV
                     QQVSRLLQFFFAGSEYSKVDQVVLAGGCATIDGIAGMLEEQVGVPCVVANPLARMSMS
                     PTVQGQSLSQDAPALMIAVGLALRSFD"
     gene            1370..1522
                     /locus_tag="VFM52_08345"
     CDS             1370..1522
                     /locus_tag="VFM52_08345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8765216.1"
                     /translation="MFGGIRAKILRTRNGLRLVSQVFPVMAGTFVAARFRAVMEASFP
                     LIRTIL"
     gene            1641..>2510
                     /locus_tag="VFM52_08350"
     CDS             1641..>2510
                     /locus_tag="VFM52_08350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015448758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase domain-containing protein"
                     /protein_id="HET8765217.1"
                     /translation="MRILKRLLRLALILAFSGLLLGLGAVGVAYWLIAPRLPSVAVLK
                     DYHMQVPLRVESADGKLIATFGETRRIPVSIDQVPANLKHAVLSAEDADFYHHPGVDW
                     RGIVRAAWHVALSGGDKTQGGSTITQQVARNFFLSPQKLYSRKVTEIFIALQIEHELS
                     KDQILELYLNKMFLGHRAYGVAAAASYYYGKTLDQLTIAQCATIASTFQLPSLVNPIN
                     SPARMLARRNWVLGEMLRHRYITQAQYQQAIAEPNDAAPHEAPIQVDAPYLAEMVRRQ
                     VLDRLGNDALTEGY"
BASE COUNT          408 a          847 c          806 g          449 t
ORIGIN      
        1 atgatctgct tgcgcgccag caggtgctcg cgcacttttt ccagagcctt gatcgtggcg
       61 atcttcacgt cgacctgctt gatctcgtct tgcaggatgg tgttgcggtc gttctggttg
      121 tcgatgcgtg cgctcatcca gatcgcccac agcagcacga aacccagccc ggccacgaag
      181 gcggcgccga gctggccgta gaactcgcgt tcgcgcagct tgcgccgctc cgcacgccag
      241 ggaaggaggt tgacgtgggc catcagtcga aactcctcag ggcgaggccg accgcgatca
      301 tcagcgccgg cgcgtcctgg gacagcgact gtccctgcac cgtgggcgac atcgacatgc
      361 gcgccaatgg attggcgacg acgcacggca cgccgacctg ctcctccagc atgccggcaa
      421 tgccatcgat cgtggcacag ccgccggcga gcacgacctg gtcgaccttg ctgtattcgc
      481 tgccggcaaa gaagaactgc agcagccggc tgacctgctg caccagcgat tccttgaacg
      541 ggtccagcac ctcgctggcg taggactcgg gcaggcctcc cttgcgcttg gcacgcccgg
      601 cctcctcgta ggagagcccg tagcggcgca tgatctcgtc ggtgagctgc ttgccgccga
      661 acacctgctc gcgcgagtag atcgtgcgct ggttgcgcag caccgacagc gtggtcatcg
      721 tcgcgccgat gtcgaccacc gcgaccagcg cgtcgcggcc gacgttgagc tggtcggtca
      781 ggagcgcgaa ggcgttttcc atcgcgaacg cctcgacgtc gatcaccttc gcggtgaggc
      841 cgccgagctc gagcgcggcg acgcgcatgt cgacgttctc ggtgcgcgag gcggcaagca
      901 acacgttgtt catctcgggg ttgtcgcgca ccggccccat cacctcgaaa tcgaggctga
      961 cctcgtcgat cgggtacggg atgtactggt tggcctcgac ctggatctgg ccttcgaggt
     1021 catcctcggt cagctcgctc gccatcggga tgatgcgggt gatgaccgcc gacccggcca
     1081 ccgcggcggc ggcatgcttg agcttggagc cggagcgcgc cagcgcgcgg cggatcgcct
     1141 cgccaaccgc ctcgacctcg acgatgttct tttcgaccac ggcattgggc ggcagcggct
     1201 cgaccgcgta gttctcgacg cgatagcgat tgccggcctg gctgagctgc agcagcttga
     1261 ccgcggtcga actgatgtcg accccgatca gcgccggctt cttgggtgtg aagagcccca
     1321 cggtgttacc ccctttgccc ctgggcacca accgatggat tcacggccga tgttcggcgg
     1381 cattagagcg aaaattttac gtacgcgcaa cggcctgcgg ctggtttctc aagtatttcc
     1441 cgtgatggcc ggcacatttg tcgcagcgcg ttttcgtgcc gtgatggagg cctcgtttcc
     1501 gctgatccgg acgatcttgt gaacgtcgcg catgcaaacc cgaacatgta gcgtcgctgg
     1561 ccccaaactg gcgggcaacg gcggcgttgc cggcaccagc ccgtataatt tgccggtttc
     1621 cggcattggt ccgcctcttg atgcgtatcc tgaagcgtct gctgcgcctg gccttgatcc
     1681 tggcgttctc cggcctgctg ctcggcctcg gcgcagtcgg cgtcgcgtac tggctgatcg
     1741 cgccgcgcct gccatcggtg gcggtgttga aggactacca catgcaagtg ccgctgcggg
     1801 tggagagtgc cgacggcaag ctgatcgcca ccttcggcga gacgcggcgc atcccggtgt
     1861 cgatcgacca ggtgccggcc aacctcaagc acgcggtgct gtccgccgag gacgccgact
     1921 tctaccacca ccccggcgtg gactggcgcg gcatcgtgcg cgcggcatgg cacgtggcgc
     1981 tgtccggcgg cgacaagacg cagggcggct cgacgatcac ccagcaggtg gcgcggaact
     2041 tcttcctgtc accgcagaag ttgtactcgc gcaaggtgac ggagatcttc atcgcgctgc
     2101 agatcgagca cgagctgagc aaggaccaga tcctcgagct ctatctcaac aagatgttcc
     2161 tcggccatcg cgcatacggc gttgccgccg ccgcgtcgta ctactacggc aagacgctcg
     2221 accagctgac gatcgcacag tgcgcgacga tcgcctcgac gttccagctg ccgtcgctgg
     2281 tgaacccgat caacagcccc gcgcgcatgc tggcgcggcg caactgggtg ctcggcgaga
     2341 tgctgcgcca ccgctacatc acccaggccc agtaccagca ggcgatcgcc gagccgaacg
     2401 acgccgcgcc gcacgaggcg ccgatccagg tcgacgcgcc gtacctcgcg gaaatggtgc
     2461 gccggcaggt gctcgaccgc ctcggcaacg acgcgctcac cgaaggctac
//
LOCUS       DASSVL010000477         4816 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1013704,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000477 DASSVL010000000
VERSION     DASSVL010000477.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 4816)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4816)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4816
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1013704"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1389)
                     /locus_tag="VFM52_08355"
     CDS             complement(<1..1389)
                     /locus_tag="VFM52_08355"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HET8765218.1"
                     /translation="MNIRDAHPVETPDYRLVRRIGASSTASVYAATELSSGRPLAIKI
                     FHRVDAECVASLERQLQANTQLAHPNIVRVRGTGRTRDGRFFYAMPLLRGFETMHPNL
                     LGRPLRIAMMLRELLAGLDDAHYCGVVHGDIKPSNVLFDPQGRALLADFGIARCMAGA
                     GGEPASLQSDLRDVGMLAYALLGGASTARQHEATGSPTSTGRPVPRLPPGAAAWQPWF
                     DKALAESPERQFHSAQAMADALGAIARRGHHGGGGPVAPTPPPRAPAWPWRTALPIAA
                     IVVLLGWTAWDYFGESGVPGDVPAAVSSETTVVPPTVNNETTVVPPAVSIAAPALPMA
                     VAQPATPSPSVGSPVPTPADRVQTLIGAADTLRSQGHLVSPPLENAASKYLAALTLDP
                     GNRAATAGIKATLATLRDRLDKTWRDGRDTTEAAGMLRQGDELAKHADAPSRRSWNRH
                     RRRLARQVGAADA"
     gene            complement(1573..3774)
                     /locus_tag="VFM52_08360"
     CDS             complement(1573..3774)
                     /locus_tag="VFM52_08360"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional serine/threonine-protein
                     kinase/formylglycine-generating enzyme family protein"
                     /protein_id="HET8765219.1"
                     /translation="MSDIDANRMDVPGYRLVRPIGSSGMATVYVAMQRSLERQVAVKV
                     FDTVDIEAIARFEQLLRTSARLSNPHIVGAHQIGRTADGRTFHSMPFLLSAELSRHTL
                     RSKPLKVAALLREILDALGYAHRRGIVHGGVKPANVLFDERGHARLADFGIARCAAEL
                     GHPHPDAAGYLSPEQARGNPPGQRSDLYSVGVLAYELLTGVLPFQGEDAVATAIAHVE
                     QPIPRLPPMVGAWQPWIDKALAKVPAQRFQSAEAMADALSAIDGLGENGARPVGNRAK
                     LHVPTWAVAAAALIVTAGAIAGWATWKHQRAPIAPPADSAALAASGAPAANLPAASPP
                     SAPAAPATIAPLAGRVQILIAQADALRAGDHLFSPPGNNAAEQYLTALMLDPGNPAAV
                     AGIDAMLATLRHRLDSAWRDDKFSQAAGLLKQCDLLATHAGTSAGRAWREQRAALAKN
                     VGGSVAMAARNHDAKRVAALKPLADALPAIYPAGFDAAAAEREATTLAAGTLLRDPGG
                     PVLAYVPAADNAPAFAIQRVEVTRADYARFVQATHRPDSKCLEAYNPFSRMQHLTWQK
                     PGFAQGADHPAVCVSWDDAIAYAAWLSRTTGQEYVLPGGAEWLRAARGMPKENPCQLG
                     NVDDVSRKSAMDNDKLSCNDGAEYTAAVGHYAPSGVGAFDMYGNVSEWLAGGGTGSRV
                     FRGMSWRDGGHQTPLGRQGTADSDIGYTNVGFRVARVIDATHPAPPVVSGH"
     gene            complement(3871..4164)
                     /locus_tag="VFM52_08365"
     CDS             complement(3871..4164)
                     /locus_tag="VFM52_08365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8765220.1"
                     /translation="MAAAAAISVASLVLGMLGYHLTEGMDWLDAFLNASMTLGGMGSV
                     DTLHSATGKSFAGVRAPCSSLVRLGAAGLPLAPFVHRLLHWIHLPEGRREGQG"
     gene            complement(4322..>4816)
                     /locus_tag="VFM52_08370"
     CDS             complement(4322..>4816)
                     /locus_tag="VFM52_08370"
                     /inference="COORDINATES: protein motif:HMM:NF025912.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HET8765221.1"
                     /translation="IDDNAPAETPQAAVARFQEALATSPDDAGLKLDLALAKARTGDT
                     ANAQATLDALPVDLAEDDRAKALAALLAMQQSLAAIPPAAELLARVEHDPHDFAALDG
                     LGVRRLLGGDAADAMQHWLAILAADRGWNEGLARKRLLDAFRIVHDDALVSATRRRMS
                     SLLF"
BASE COUNT          705 a         1620 c         1735 g          756 t
ORIGIN      
        1 cgcatcggcg gcgccgacct ggcgtgccag tcgcctgcga tgcctgttcc aactgcgacg
       61 tgagggtgca tccgcgtgtt tcgccagttc gtctccttgc cgcagcatgc cggcggcttc
      121 ggtcgtgtcg cggccgtcac gccaggtctt gtccagccgg tcgcgcagcg tggccagggt
      181 cgctttgatg cccgccgtcg ccgcgcggtt gccgggatcg agcgtcaatg ccgcgagata
      241 cttgctcgcg gcattctcga gcggcggcga gaccaggtgg ccctggctgc gcaacgtgtc
      301 ggccgcgccg atcaaggtct gcacgcgatc cgccggcgtg ggcacgggtg aacccactga
      361 tggcgaaggc gttgcgggtt gcgcgacggc catcggcaac gcgggtgccg cgatgctcac
      421 cgccggtgga acgacggtcg tttcgttgtt cacggtcggc ggaacgacgg tcgtttcgct
      481 gctgaccgcg gcaggcacgt cgcccggcac gcccgattcg ccgaagtaat cccaggcggt
      541 ccagccgagc agcaccacga tcgcggcgat cggaagtgcg gtgcgccacg gccatgccgg
      601 tgcgcgcggg gggggcgtgg gggcgacggg tccaccgccc ccgtgatgcc cgcggcgggc
      661 gatcgcgccg agcgcatcgg ccatcgcctg cgcgctgtgg aactgccgtt ccggtgattc
      721 ggccaatgcc ttgtcgaacc atggctgcca tgcggcggca cccggcggca gccgcggcac
      781 gggccgcccg gtcgacgtgg gtgatccggt cgcctcgtgt tgccgggccg tcgatgcgcc
      841 cccgagcaat gcgtacgcga gcatgccgac gtcgcgcagg tccgactgca ggcttgccgg
      901 ttcgccaccg gctccggcca tgcaacgggc gatcccgaaa tcggcgagca acgcgcggcc
      961 ttgcgggtcg aacagcacgt tggagggctt gatgtcgccg tgcaccacgc cgcagtagtg
     1021 tgcgtcatcc agtcccgcga gcagttcgcg cagcatcatc gcgatccgca gcggcctgcc
     1081 gagcaggttc gggtgcatcg tttcgaaacc ccgcagcagc ggcatggcgt aaaagaagcg
     1141 tccatcgcgc gtgcgccccg ttccacgcac gcgcacgatg ttcggatgcg cgagctgcgt
     1201 attcgcctga agctgccgtt cgaggcttgc aacgcactcg gcgtcgacgc gatggaagat
     1261 cttgatcgcc agcgggcgcc cgctcgacag ttccgtggct gcgtacacgg acgccgtgct
     1321 gcttgcgccg atccgccgga ccaggcggta gtcgggcgtc tcgaccgggt gcgcgtcgcg
     1381 gatgttcatg gccacgagga cgccggcccg atggccaggt ttgcagcggt ggagggatgg
     1441 gtggctgcca tcgatcgccg ccctccgtgg cgggttcaag cacgcccctg cctttcgatg
     1501 atacagcggc ggacgcggca aggcaccgca catcgtgacg cggccctgaa cgcgcgccac
     1561 tgaacgccga agtcagtggc cggaaaccac gggcggcgcg gggtgcgtcg catcgatcac
     1621 ccgcgccacg cgaaagccca cgttggtgta gccgatatcg gaatcggcgg tgccctggcg
     1681 cccgagcggc gtctggtggc cgccgtcgcg ccacgacatc ccgcggaaca cgcgcgagcc
     1741 ggtgccgcca cccgcgagcc attcgctgac gttgccgtac atgtcgaagg cgccgacccc
     1801 gctgggtgcg tagtgcccga cggcagcggt gtattcggca ccgtcgttgc atgacaactt
     1861 gtcattgtcc atggcgctct tgcggctgac gtcatcgaca ttcccgagtt ggcacgggtt
     1921 ttccttcggc attccacgcg ccgcgcgcaa ccattcggcg ccgccgggca agacgtattc
     1981 ctgcccggtg gttcgcgaaa gccacgccgc gtacgcgatg gcatcatccc agctcacgca
     2041 aacggccgga tgatcggcgc cttgcgcgaa gcccggcttc tgccaggtga ggtgctgcat
     2101 gcgcgagaac gggttgtagg cttcgaggca cttcgaatcg gggcggtgcg ttgcctgcac
     2161 gaacctggcg taatcggcgc gcgtcacttc gacgcgctgg atcgcgaacg ccggtgcgtt
     2221 gtcggccgcc ggcacgtagg cgagcaccgg gccacccggg tcgcgcagca aggttcccgc
     2281 ggccagcgtg gtggcttcgc gttccgccgc ggcggcgtcg aagccggcgg gatagatcgc
     2341 gggcaatgcg tcggccagtg gtttcagggc ggccacgcgt ttggcgtcgt ggttccgggc
     2401 cgccattgca acgctgccgc cgacgttttt cgcgagcgcg gcccgctgct cccgccacgc
     2461 acggcccgcc gacgtgcctg catgcgtggc gagcaggtcg cactgcttca gcaggcccgc
     2521 ggcctggctg aacttgtcat cgcgccaggc gctgtccagg cggtggcgca aggtcgccag
     2581 catcgcatcg atgccggcca ccgcggccgg gtttccgggg tcgagcatca gtgcggtgag
     2641 gtattgttcg gcggcgttgt tgccgggcgg cgaaaaaagg tggtcgcccg cgcgcagcgc
     2701 atcggcctgc gcgatcagga tctgcacccg gccggcgagt ggtgcgatgg tcgcgggcgc
     2761 tgctggcgcg gacggtggcg atgccgcggg caggtttgcg gcaggcgcgc cggatgccgc
     2821 cagtgcggcg gaatcggccg gtggcgcgat gggggcgcgc tggtgcttcc acgttgccca
     2881 gcctgcgatg gcgccggccg tcacgatcaa ggccgcagcg gcgaccgccc aggtgggtac
     2941 gtgcagcttc gcgcggttgc caacggggcg cgcgccgttt tccccgaggc catcgatcgc
     3001 ggacaatgca tcggccattg cctcggcgct ctggaaccgc tgcgcgggca ccttggcgag
     3061 cgccttgtcg atccacggct gccatgcgcc gaccatcgga ggcagccgcg gaataggttg
     3121 ctcgacgtgg gcgatcgcgg ttgcgactgc atcttcgccc tggaacggca gcacgcccgt
     3181 caagagctcg tatgcgagca cgccgacgct gtacaaatcg gaacgctgcc cgggcggatt
     3241 gccacgcgcc tgttcgggac tcaggtagcc ggccgcgtcg ggatgcgggt ggcccagctc
     3301 ggcggcgcaa cgcgcgatcc cgaaatcggc gagccgtgcg tggccgcgct cgtcgaacag
     3361 gacgttggcg ggcttgacac caccatgcac gatgccacgc cggtgagcgt aacccagcgc
     3421 gtccaggatt tcgcgcagca gcgccgcgac cttcaggggt ttcgagcgca gggtgtgccg
     3481 cgaaagttcg gcgctcagca ggaacggcat cgaatggaac gtgcggccgt cggcggtgcg
     3541 cccgatctgg tgtgcgccca cgatgtgtgg attggaaagc cgtgcgctgg tgcgcagcag
     3601 ttgctcgaaa cgcgcgatgg cttcgatatc caccgtgtcg aacaccttca ccgcgacctg
     3661 ccgttccagc gagcgttgca tcgcgacgta cacggtggcc atgccgctgc tgccgatcgg
     3721 gcgcaccagg cggtagccgg gcacgtccat ccggttggcg tcgatatcgc tcatggcgag
     3781 aacgcgcgcg tgtgacaacg cgccgggcgc gccgaagcgg acccgggccg ggacaggcat
     3841 tcacggcggc gaagtgcgtg gctcaagtga tcaaccctgg ccttcgcggc ggccctccgg
     3901 caggtggatc cagtgcagca ggcgatgcac gaacggtgcc agcggcagcc ccgccgcgcc
     3961 gagccgcaca aggctgctgc agggtgcacg aacgccggca aacgacttgc cggtggcgct
     4021 gtgcaaagtg tccacggagc ccatgccacc caaggtcatc gacgcgttca ggaaggcgtc
     4081 cagccagtcc atgccttcgg tcaggtggta acccagcatg cccaggacca gcgaagccac
     4141 gctgatcgcg gcggcggcgg ccaccgcctt gccgacccgg cgcagaagga aacagccgct
     4201 gggggagcag cggctcgctg cggtgctcat ggcgaaacaa gtggcggagc atgcaggccg
     4261 tcgcgctgtt cggggcgccg attatgcatc ggcgcgcgcg ggagattccc ggaacggctt
     4321 cctagaacag caacgaggac atcctgcgcc gcgtcgccga aaccagcgcg tcgtcatgca
     4381 cgatgcggaa cgcgtccagc aggcgcttgc gcgcgagacc ctcgttccag ccgcgatcgg
     4441 cggcgaggat cgccagccag tgttgcatgg cgtccgcggc gtcgccgccc agcaaccggc
     4501 gcacaccgag cccgtccagc gcggcgaagt cgtgcggatc atgttcgacg cgcgccagca
     4561 gctccgcagc cggcgggatc gcggcgagcg attgttgcat cgccagcaat gcggccaggg
     4621 ccttggcgcg gtcgtcttcc gcgagatcga cgggcagggc gtccagcgtg gcctgcgcgt
     4681 tcgcggtgtc gcccgtccgt gctttcgcga gcgcaaggtc gagtttcaag cccgcatcgt
     4741 cgggtgacgt cgcgagtgcc tcctggaaac gcgcgaccgc ggcctgcggc gtctcggccg
     4801 gagcgttgtc gtcgat
//
LOCUS       DASSVL010000478         2657 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_773343, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000478 DASSVL010000000
VERSION     DASSVL010000478.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2657)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2657)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2657
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_773343"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1366
                     /locus_tag="VFM52_08375"
     CDS             <1..1366
                     /locus_tag="VFM52_08375"
                     /inference="COORDINATES: protein motif:HMM:NF005511.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HET8765222.1"
                     /translation="ATLARFCEHSAANLAWLEACGVRFGARTSPHKTSYPPDGVFLYY
                     SGSEMVPAFRGATAPTPRGHRVVSNGQSGAALYAAMQQATLRAGARPLRQAAVRRLVR
                     LRGADGQPGRVVGVEAWCLPEGDPRTRRHAELDARIARWRLYHPGKAAAARREQAAIE
                     QALAAPCYLRAGRAVVLATGGYIYNPELIATHAPRYRAGWPIGGAGCDGSGVRLGSSI
                     GAATARLGNISAWRFITPPYGWPKGLVVNARGERFCNEQVYGARLGYEIVEHQDGKAW
                     LILDARLRRQAIRECLFGRLWAFQSIPALMLMLAGSPHARSLADLARRIGADPATLEA
                     TVAAANAAADGSHDDPFGKSPDMRQACLQPPFHALDISMGARRFPLATLSLGGLVVDE
                     ADGHVRDAQGANLPGLFAAGRAAIGLASAHYVSGLSLADCVFSGRRAGRAAAAEATAG
                     VAHE"
     gene            1359..2126
                     /locus_tag="VFM52_08380"
     CDS             1359..2126
                     /locus_tag="VFM52_08380"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HET8765223.1"
                     /translation="MNDRLAGKVALVTGGASGLGAETARLFVEAGARVAITDLADDAG
                     KQLAAELGADRALFLHHDVASEADWQRVIADTATRLGALDVLVNNAGILIPGDIEHAT
                     LDAFRKTIEVNAQSCFLGLKHGVAAMKARGGAIVSVASVASWLAVDGYPAYSASKAAV
                     AALTRSAALHCRRKGYDIRINSLHPDGIWTPMMQASLPPGVPPEAVLFDPHANPRGRA
                     LKVEHVARALLFLASEDAATVSGAELHADRAVHGLGL"
     gene            2129..>2657
                     /locus_tag="VFM52_08385"
     CDS             2129..>2657
                     /locus_tag="VFM52_08385"
                     /inference="COORDINATES: protein motif:HMM:NF013161.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HET8765224.1"
                     /translation="MAAPTDPRYHPLRVRAVMEETEDAKSVVFEVPPELADTFAYKPG
                     QFLTLRLAVGSRHVRRCYSMSSAPAVDDAPRVTIKRVRDGVGSNWVCDRITAGDTIEV
                     LPPSGAFTPRAGLDGDFLLLAGGSGITPVFSILRSTLHLGTGRVVLLYMNRDERSIIF
                     RKELMTLAAAHPTRLQ"
BASE COUNT          354 a          996 c          937 g          370 t
ORIGIN      
        1 ggcgacgctc gcgcgcttct gcgagcacag cgccgccaac ctcgcctggc tcgaagcctg
       61 cggcgtgcgc tttggtgcgc gtacctcgcc gcacaagacc tcgtacccac ccgatggcgt
      121 gttcctgtac tactccggca gcgagatggt gccagccttc cgcggcgcca ccgcgcccac
      181 gccgcgtggc catcgcgtgg tgtcgaacgg acagagcggt gccgcgctgt atgccgccat
      241 gcaacaggcc acgctgcgtg ccggcgcccg cccgctgcgc caagcagcgg tgcgccggct
      301 ggtgcggctg cgcggagccg atggccaacc cggccgcgtg gtcggcgtcg aggcgtggtg
      361 cctgccggaa ggcgacccgc gcacgcgccg gcatgccgaa ctggacgcgc gcatcgcgcg
      421 ctggcgcctg taccaccccg gcaaggccgc ggcggcgcgt cgcgagcagg cggcgatcga
      481 acaggcgctg gccgcgccgt gctacctgcg cgccggacgc gccgtggtgc tggccaccgg
      541 cggctacatc tacaacccgg agctgatcgc cacgcacgcg ccgcgctatc gcgccggctg
      601 gccgatcggc ggcgccggct gcgacggcag cggcgtgcgc ctgggcagca gcatcggcgc
      661 cgcgacggcg cgcctcggca acatctccgc atggcgtttc atcacaccgc cgtatggctg
      721 gccgaaaggg ctggtggtca acgcgcgcgg cgagcgcttc tgcaacgagc aggtctacgg
      781 cgcgcgcctc ggttacgaga tcgtcgagca ccaggacggc aaggcgtggc tgatcctcga
      841 tgccaggctg cgccggcagg ccatccgcga atgcctgttc gggcggctgt gggcgttcca
      901 gtcgatcccc gccctgatgc tgatgctggc gggctcgccg catgcgcgct cgctggccga
      961 tctcgcgcgc cggatcggcg ccgacccggc cacgctcgag gccacggtag ccgccgccaa
     1021 cgcggccgcg gacggcagtc acgacgaccc gttcggcaag tcgccggaca tgcgccaggc
     1081 ctgcctacag ccaccgttcc acgcgctgga catctcgatg ggcgcgcgcc gcttcccgtt
     1141 ggcgacgctg agcctgggcg ggctggtggt cgacgaagcc gacggccacg tgcgcgatgc
     1201 acagggcgcg aacctgcccg gcctgttcgc cgccgggcgc gccgcgatcg gcctcgcctc
     1261 ggcgcactac gtgagcggcc tgtcgctcgc cgattgcgtg ttctccgggc gccgcgccgg
     1321 acgcgcggcc gccgctgaag ccactgcggg agtcgcccat gaatgatcgt cttgccggca
     1381 aggtcgcgct ggtcaccggc ggcgccagcg gcctgggcgc ggaaaccgcg cggctgttcg
     1441 tcgaagccgg cgcgcgggtg gcgatcaccg accttgccga cgatgcgggc aagcaactgg
     1501 ccgccgaact cggcgccgat cgcgcgctgt tcctgcacca cgacgtggcc agcgaggcgg
     1561 attggcagcg cgtgatcgcg gacaccgcca cccgcctcgg cgcgctcgac gtactggtca
     1621 acaatgccgg catcctgatc cccggcgaca tcgagcacgc cacgctcgac gccttccgca
     1681 agacgatcga ggtcaacgcg cagtcgtgct tcctcggcct caagcacggc gtggccgcga
     1741 tgaaggcgcg cggcggcgcc atcgtcagcg tggcgtcggt ggcctcgtgg ctggcggtgg
     1801 acggctatcc ggcctacagc gcgtcgaagg ccgcggtggc ggcgctcacc cgttcggcgg
     1861 cgctgcactg ccggcgcaag ggctacgaca tccgcatcaa ctcgctgcac ccggacggca
     1921 tctggacgcc gatgatgcag gcctcgctgc cgcccggcgt accgccggaa gccgtgctgt
     1981 tcgacccgca cgccaacccg cgcggccgcg cgctcaaggt cgagcacgtc gcccgcgcgc
     2041 tgctgtttct cgccagcgag gacgcggcga cggtgagcgg cgccgaactg catgccgacc
     2101 gtgcggtgca cggcctgggg ttgtagccat ggccgcgcca accgacccgc gctaccaccc
     2161 gctgcgcgtg cgcgcggtga tggaggagac cgaggacgcc aagtcggtgg tgttcgaggt
     2221 gccgcccgag cttgccgaca cgtttgcgta caagcccggc cagttcctca ccctgcgcct
     2281 cgcggtaggc agccgccacg tgcgccgctg ctattcgatg tccagcgcgc cggcggtgga
     2341 cgacgccccg cgcgtcacca tcaagcgcgt gcgcgacggc gtgggctcca actgggtgtg
     2401 tgaccgcatc accgccggtg acaccatcga ggtgctgccc ccgtccggcg cgttcacgcc
     2461 acgcgccggg ctcgacggcg atttcctgct gctcgccggc ggcagcggca tcaccccggt
     2521 gttttccatc ctgcgctcca cgctgcacct cggcaccggc cgcgtggtgc tgctctacat
     2581 gaaccgcgac gagcgctcga tcatcttccg caaggagctg atgacgctcg ccgccgcgca
     2641 cccgacgcgg ctgcagg
//
LOCUS       DASSVL010000479         2741 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_844151, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000479 DASSVL010000000
VERSION     DASSVL010000479.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2741)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2741)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2741
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_844151"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            85..1210
                     /gene="prfB"
                     /locus_tag="VFM52_08390"
     CDS             join(85..159,161..1210)
                     /gene="prfB"
                     /locus_tag="VFM52_08390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014403117.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 2"
                     /protein_id="HET8765225.1"
                     /translation="MIETNPIHAQIADLTGRVESLRGYLDYPAKRERLEEVALELENP
                     NIWDDPARAQELGRERARLESVVNGISELMSSLGDARELLEMAHADGDEDTAAAVRAD
                     VARLEARVAKLEFQRMFSGKMDACNAFVDIQAGAGGTEAQDWAEMLLRMYLHWVESRG
                     WKAEIMEASAGEVAGIKSATFRVEGDYAYGWLKTEIGVHRLVRKSPFDSDNRRHTSFT
                     SVFVSPEVDDSIEIDINPADIKMDVYRSSGAGGQHVNKTESAVRLTHVPTGVVVACQV
                     ERSQHSNRDRAMKMLKAKLYELEVQKRNAERDALEATKSDIGWGSQIRNYVLDQSRIK
                     DLRTGVERSDTQKVLDGDLDEFIEASLKSGLDAGAKRADA"
     gene            1241..1579
                     /locus_tag="VFM52_08395"
     CDS             1241..1579
                     /locus_tag="VFM52_08395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007808908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8765226.1"
                     /translation="MNRKLMCSVGLALAVMAGSTVMAAPQPQASGDNVVKKDAKAVGH
                     GVADGARDVGHATKDVAVKVGHGFKGAGIGIGHGAKKAGVGIGHGAKEGWDATKSSFK
                     NAFGKGDKQD"
     gene            1643..>2741
                     /locus_tag="VFM52_08400"
     CDS             1643..>2741
                     /locus_tag="VFM52_08400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007508449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043039 - tRNA aminoacylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid--tRNA ligase-related protein"
                     /protein_id="HET8765227.1"
                     /translation="MSETTDTPPVDENKLIAERREKLAALRGQGIAFPNDFRIDGFAG
                     DLQAEYADKEVFTPEAIEALHRRVKVAGRIVLKRVQGKVSFVQVQDVTGRIQLFLHQN
                     TLGEETYGAFKGWDLGDIVGAEGELIRTKSGELSVKANHLRLLTKSLRPLPDKHHGMA
                     DVEQRYRQRYVDLIVTPEARDTFQKRSRVIGFIRHWLEESPRRFMEVETPMMHVIPGG
                     ATAKPFVTHHNALDIDLYLRVAPELHLKRLVVGGFERVYELNRCFRNEGVSTRHNPEF
                     TTLELYQAYASYDEIMDLTENLIREAAQAVIGTTALNWDGNAIDVGQPFRRWTMEDAV
                     LERNPEIRRAELRDRAALAAHAQRLGIAVKDG"
BASE COUNT          527 a          917 c          911 g          386 t
ORIGIN      
        1 agccatgtcg ccggcggcgc ggcggtgcgt ccgcgcgggg ccgtctgtta tccttgtgcg
       61 cttgcatccc accctgaagc cgacatgatc gagaccaatc ccatccatgc gcagatcgcc
      121 gacctcacgg gacgcgtcga atcgcttagg gggtatcttt gactaccccg ccaagcgcga
      181 acggctcgag gaagtagcgc tcgagctgga gaacccgaac atctgggacg accccgcacg
      241 tgcgcaggag ctgggccgcg agcgcgcccg gctggagagc gtggtcaacg gcatcagcga
      301 gctgatgtcc agcctcggcg atgcgcgcga attgctggaa atggcgcacg ccgacggcga
      361 cgaggacacg gccgccgcgg tgcgcgcgga cgtcgcgcgg ctggaagcgc gcgtcgccaa
      421 gctggaattc cagcgcatgt tctccggcaa gatggacgcc tgcaacgcgt tcgtcgacat
      481 ccaggccggc gccggcggca ccgaggcgca ggactgggcc gagatgctgc tgcgcatgta
      541 cctgcactgg gtggaatcgc gcggctggaa ggccgagatc atggaagcct ccgcgggcga
      601 agtggccggc atcaagtccg ccacattccg cgtcgagggc gattacgcct acggctggct
      661 gaagaccgaa atcggcgtgc accgcctcgt gcgcaagagc ccgttcgatt cggacaaccg
      721 ccgccacacc agcttcacca gcgtgttcgt ttcgcccgag gtcgacgaca gcatcgagat
      781 cgacatcaac cccgccgaca tcaagatgga tgtctatcgg tcctcgggtg ccggcggcca
      841 gcacgtcaac aagaccgagt cggcggtgcg cctgacccac gtgcccaccg gcgtcgtcgt
      901 ggcctgccag gtggagcgca gccagcactc caaccgcgac cgtgcgatga agatgctgaa
      961 ggccaagctg tacgaactgg aagtgcagaa gcgcaatgcc gagcgcgatg cgctggaagc
     1021 caccaagtcc gacatcggct ggggcagcca gatccgcaac tacgtgctcg accagagccg
     1081 catcaaggac ctgcgtaccg gcgtggagcg ctcggacacg cagaaggtgc tggacggcga
     1141 tctggatgag ttcatcgaag ccagtcttaa atcgggtctc gacgccggtg cgaagcgcgc
     1201 cgacgcctga gcccttccgt tgaccgacga ggtgacgcgc atgaaccgca aactgatgtg
     1261 cagtgtgggg ttggccctgg ccgtcatggc cggcagtact gtcatggctg cgccgcagcc
     1321 gcaagccagc ggcgacaacg tggtcaagaa ggacgccaag gcggtcggcc acggcgtggc
     1381 cgatggtgcg cgcgacgtag gccatgccac gaaagacgtg gcggtgaagg tcggccatgg
     1441 cttcaagggt gccggcatcg gcatcggcca cggtgcgaaa aaggccggcg tcggcatcgg
     1501 ccatggcgcc aaggaaggct gggacgccac caagagctcc ttcaagaacg ccttcggcaa
     1561 gggcgacaag caagactgac ggcgcgcgcc gcctttcctc tcatcactgc cgccgcgcgc
     1621 accggtggcc tcggaaaacc tcatgagcga aaccaccgat accccgcccg tcgacgagaa
     1681 caagctgatt gcggaacgcc gcgagaaact ggcggcgctg cgcgggcagg gcatcgcgtt
     1741 tccgaatgat ttccgcatcg acggctttgc cggcgacctg caggccgaat atgcggacaa
     1801 ggaagtcttc acgccggaag ccatcgaggc gctgcatcgg cgggtgaagg tcgccgggcg
     1861 catcgtgctc aagcgtgtgc agggcaaggt gagcttcgtg caggtgcagg acgtcaccgg
     1921 gcgcatccag ttgttcctgc accagaacac gctgggcgag gagacctacg gcgcattcaa
     1981 gggctgggac ctgggcgaca tcgtcggcgc ggaaggcgag ctgatccgca ccaagtccgg
     2041 cgagctgagc gtcaaggcca accacctgcg cctgctgacc aagagcctgc gcccgctgcc
     2101 ggacaagcat cacggcatgg ccgacgtcga gcagcgctac cgccagcgct acgtcgacct
     2161 catcgtcacc ccggaagcgc gcgacacctt ccagaagcgc tcgcgcgtga tcggcttcat
     2221 ccgccactgg ctggaggaat cgccgcgccg cttcatggaa gtggagacgc caatgatgca
     2281 cgtgattccc ggcggcgcca cggccaagcc cttcgtcacc caccacaacg cgctggacat
     2341 cgacctctac ctgcgcgtgg cgccggagct gcacctcaag cgcctcgtcg tcggcggctt
     2401 cgagcgcgtg tacgagctca accgctgctt ccgcaacgaa ggcgtctcca cccgccacaa
     2461 ccccgagttc accacgctgg agctgtacca ggcctacgcc agctacgacg agatcatgga
     2521 tctcaccgag aacctcatcc gcgaggcggc gcaggccgtg atcggcacca ccgcgctcaa
     2581 ctgggacggc aatgccatcg acgtcggcca gccgttccgc cgctggacga tggaggacgc
     2641 ggtgctggag cggaaccccg agatccggcg cgccgagctg cgcgaccgcg cggcgctcgc
     2701 cgcgcacgcg cagcgcctcg gcatcgccgt caaggacggc t
//
LOCUS       DASSVL010000480         2592 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_95408, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000480 DASSVL010000000
VERSION     DASSVL010000480.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2592)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2592)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2592
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_95408"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(1..87)
                     /locus_tag="VFM52_08405"
     tRNA            complement(1..87)
                     /locus_tag="VFM52_08405"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(51..53),aa:Ser,seq:cga)
     gene            complement(171..2543)
                     /gene="ppsA"
                     /locus_tag="VFM52_08410"
     CDS             complement(171..2543)
                     /gene="ppsA"
                     /locus_tag="VFM52_08410"
                     /EC_number="2.7.9.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009602234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008986 - pyruvate, water dikinase
                     activity [Evidence IEA];
                     GO_function: GO:0016772 - transferase activity,
                     transferring phosphorus-containing groups [Evidence IEA];
                     GO_process: GO:0006090 - pyruvate metabolic process
                     [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate synthase"
                     /protein_id="HET8765228.1"
                     /translation="MNHLVLWLDQLRMTDLGKVGGKNASLGEMIGNLARLGVSVPGGF
                     ATTAQAFEEYLDKSGVAKRIQARLASLDVDDVEALTRAGKEIRAWVAETPLPAELDQA
                     IRDAYAKLCQDAGAADVAVAVRSSATAEDLPDASFAGQQETYLNVVGIEDVLRKVKEV
                     FASLYNDRAIAYRVHQGYAHENVFLSAGVQLMVRSDIGAAGVMFTLDTESGFRDVVFV
                     TGSYGLGEMVVQGAVNPDEFYVFKPTLAAGKSAVLRRNLGAKQLRMVYSKAPGERVRT
                     EETPANLRHRFCLTDAEVEALAKQALTIEQHYGRPMDIEWAKDGATGKLYIVQARPET
                     VKSRAKATQLERFQLNEKGKVLAEGRSIGQKIGAGTARVVRSLADMAKVQPGDVLVAD
                     MTDPDWEPVMKRASAIVTNRGGRTCHAAIIARELGVPAVVGTGNGMTAIPDGMPVTVS
                     CAAGDTGTIYEGKLAFDRITADLGAMPKAPLKIMMNVANPERAFDFGQLPNAGIGLAR
                     LEMIIASHIGIHPKALLAYADQDADIKAKIDERIAGYAGPVEFYIERLAEGIATIAAS
                     VYPKPVIVRMSDFKSNEYANLLGGARYEPHEENPMLGFRGASRYVDPSFSDAFGLECK
                     AVKKVREAMGLTNVEVMIPFIRTLDEGRGVIDVLAHNGLKRGENGLKVIMMCEVPSNA
                     LLADEFLDIFDGFSIGSNDLTQLTLGLDRDSSIVASRFDERNPAVKKLLSMAIKTARA
                     KGKYVGICGQGPSDHADLAEWLMEQGIESLSLNPDTVVSTWLRLAKKAAA"
BASE COUNT          395 a          847 c          878 g          472 t
ORIGIN      
        1 cggagagggt gggattcgaa cccacggtac gcttacacgt acgcctgatt tcgagtcagg
       61 tacattcgac cactctgcca cctctccaaa accttcgcgt ggtcggcgcg agccggcaag
      121 tttacgtgcc ggcccgcggc atgacaagcg ggcgcagggc cgggcagggt tcacgccgcc
      181 gctttcttcg ccaggcgcaa ccaggtgctg accacggtgt ccgggttcag cgacagggat
      241 tcgatgcctt gctccatgag ccactcggcg agatcggcgt ggtcgctcgg gccctggccg
      301 cagatgccga cgtacttgcc cttcgcgcgg gcggtcttga tggccatcga caggagtttc
      361 ttgaccgccg gattgcgctc gtcgaagcgg ctggcgacga tcgaggagtc gcgatccagg
      421 cccagggtca gctgggtgag gtcgttcgag ccgatcgaga agccgtcgaa gatgtcgagg
      481 aattcgtccg ccagcagcgc gttggacggc acctcgcaca tcatgatgac cttgaggccg
      541 ttttcgccac gcttcaggcc gttgtgcgcg agcacgtcga tcacgccgcg gccttcgtcc
      601 agcgtgcgga tgaaggggat catcacctcg acgttggtca accccatcgc ctcgcgcacc
      661 ttcttgaccg ccttgcattc caggccaaac gcatcgctga agctcgggtc gacgtagcgg
      721 ctcgcgccgc ggaagccgag catcgggttt tcctcgtgcg gctcgtagcg cgcaccgccg
      781 agcaggttgg cgtattcgtt ggacttgaaa tcactcatgc gcacgatcac cggcttcggg
      841 tagaccgacg cggcgatggt ggcgatgccc tcggcaagcc gctcgatgta gaactcgacc
      901 gggccggcat agccggcgat gcgctcgtcg atcttggcct tgatgtcggc gtcctggtcc
      961 gcataggcga gcagcgcctt cgggtggatg ccgatgtggc tggcgatgat catttccagg
     1021 cgggcgaggc cgatgccggc gttcggcagc tggccgaagt cgaatgcgcg ctcggggttg
     1081 gccacgttca tcatgatctt gagcggtgcc ttcggcatgg cgccaaggtc ggcggtgatg
     1141 cggtcgaagg cgagttttcc ctcatagatg gtgccggtat cacccgcggc acaggagacc
     1201 gtgaccggca tgccgtccgg gatcgcggtc atgccgttgc cggtgccgac caccgccggc
     1261 acacccagct cgcgcgcaat gatcgccgcg tggcaggtgc gtccgccgcg gttggtgaca
     1321 atggccgagg cgcgcttcat caccggctcc cagtcggggt cggtcatgtc ggccaccagc
     1381 acgtcgccgg gctgcacctt ggccatgtcg gccagcgagc gcaccacgcg cgcggtgccg
     1441 gcgccgatct tctggccgat cgagcggccc tcggccagca ccttgccctt ctcgttgagc
     1501 tggaagcgtt cgagctgggt cgccttggcg cgcgatttca cggtctccgg gcgcgcctgc
     1561 acgatgtaga gcttgccggt ggcgccatcc ttcgcccact cgatgtccat cgggcgccca
     1621 tagtgctgct cgatcgtcag cgcctgcttc gccagcgcct cgacttcggc gtcggtcagg
     1681 cagaagcgat ggcgcaggtt ggccggcgtt tcctcggtgc gcacgcgttc gccgggcgcc
     1741 ttcgaataca ccatgcgcag ttgcttggcg ccaaggttgc gccgcagtac ggccgacttg
     1801 cccgcggcga gtgtcggctt gaacacgtag aactcgtcgg ggttcaccgc gccctgcacg
     1861 accatctcgc cgaggccgta gctgccggtg acgaacacca cgtcgcggaa gcccgactcg
     1921 gtgtccagcg tgaacatcac gccggcggcg ccgatgtccg agcgcaccat cagctgcacg
     1981 ccggcggaga ggaacacgtt ctcgtgcgcg tagccctggt gcacgcggta ggcgatggcg
     2041 cggtcgttgt acagcgaggc gaagacttcc ttcaccttgc gcagcacgtc ctcgatgccg
     2101 acgacgttga gataggtttc ctgctggccg gcgaagctcg catccggcaa atcctcggcg
     2161 gtggccgacg agcgcacggc cacggcgacg tccgcggcgc cggcgtcctg gcacagtttc
     2221 gcgtaggcgt cgcggatcgc ctggtcgagc tcggcgggca gcggcgtttc ggcgacccag
     2281 gcgcggattt ccttgccggc gcgggtcagc gcctcgacgt cgtcgacgtc gagactggcc
     2341 aggcgcgcct ggatgcgctt ggcgacgccg ctcttgtcga gatattcctc gaaggcctgc
     2401 gccgtggtcg cgaagccgcc cggcaccgag accccgagcc tggcgagatt gccgatcatc
     2461 tccccgagcg acgcattctt gccgccgacc ttgcccagat cggtcatgcg cagctggtcc
     2521 aaccaaagca cgagatggtt caagacagtc tcctaaaggg ggtggtgcag ggaagtggaa
     2581 tgggcgctat gt
//
LOCUS       DASSVL010000481         2397 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_421001, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000481 DASSVL010000000
VERSION     DASSVL010000481.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2397)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2397)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2397
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_421001"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            268..1752
                     /locus_tag="VFM52_08415"
     CDS             268..1752
                     /locus_tag="VFM52_08415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017461685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RimK family protein"
                     /protein_id="HET8765229.1"
                     /translation="MARLVVVVEKASDWSSYYPSVDVMSAMDYLRTPVGADDERTHVI
                     NLCRSYKYLGTGYYVSLLAEARGHKVMPSVRTVNDLRRRSLYGLDIDDLNQKLTHFLP
                     AGGRDTTDFGILVYFGETAYPALQDLARQVFEMFPCPLLRIEFERDRVWQVSSIKPVG
                     LHTLDDGQEDAFAEALDSFSKKLWRKPRTRKLYRYDIAMLVNPGEDLPPSNKKALKQF
                     IAAGRELAIEVDTIGKDDYQRLAEYDGLFIRETTASNDHTYRFAHRAEREGMAVIDDP
                     TSILRCTNKIFLNDLMTSRKLAVPRTEILYRDDAKGMKEVAERLGYPLVLKIPDGSFS
                     RGVVKVEDEVALGKASDALFQHSALLLAQEYLYTEFDWRIGVLNREPLFACKYYMSRG
                     HWQIYNHNAKGGAKSGGFETIPVRKAPAEVVKLALKATNAVGDGLYGVDLKHVNGKAV
                     VIEVNDNPSIDAGVEDAYLGDELYLRVMREFLRRMERKRQGMAR"
     gene            complement(1907..2152)
                     /locus_tag="VFM52_08420"
     CDS             complement(1907..2152)
                     /locus_tag="VFM52_08420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007515133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8765230.1"
                     /translation="MRRQRLDSRRHERLLATALVWLGGGSALLASTLVPAHTALLGWA
                     PLVWLVATPLALLLIVEPGLPRDTLLAWQARRSAPRH"
     gene            2276..>2397
                     /locus_tag="VFM52_08425"
     CDS             2276..>2397
                     /locus_tag="VFM52_08425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018972530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate dehydrogenase"
                     /protein_id="HET8765231.1"
                     /translation="MTQPLQFAVFGHPIAHSLSPRIHRLFAQQFSIELVYRAIDV"
BASE COUNT          414 a          816 c          809 g          358 t
ORIGIN      
        1 gtcgtcgaga tcggaaagat ccgcgcggcg cacgcgcgcc ggtgcggtga cgggcaaaga
       61 cggcatcgag ggtggtatcc gtggcatcgg gcggggcaat cccgcggact ctagcaggcg
      121 ctgcacgggc tggcgcggac gggcatttac gtctccttca gtgccatccc ttgtgtcgtc
      181 gcggcgctgt gccagactgc gcactttgcg ccgccgcccg ccccgggcgc gaccggccgc
      241 gcatgccact tgggatcgag aggtgtcatg gcccgcctgg tcgtcgttgt cgagaaagcc
      301 tccgactgga gctcgtatta cccctccgtt gatgtgatga gcgcaatgga ttatctgcgc
      361 acgccggtcg gtgccgacga cgaacgcacc cacgtgatca acctgtgccg cagctacaag
      421 tacctgggca ccggctacta cgtgtcgttg ctggccgagg cgcgcgggca caaggtgatg
      481 ccgtcggtgc gcacggtgaa cgacctgcgc cggcgctcgc tgtacggcct ggacatcgac
      541 gacctcaacc agaagctcac ccacttcctg cctgccggcg ggcgcgacac caccgacttc
      601 ggcatcctgg tgtacttcgg cgagaccgcc tacccggcgc tgcaggacct ggcccggcag
      661 gtgttcgaga tgttcccctg cccgctgctg cgcatcgagt tcgagcgcga ccgcgtgtgg
      721 caggtcagct cgatcaagcc ggtcggcctg cacacgctgg acgacggcca ggaagacgcg
      781 ttcgccgagg cgctcgacag cttctcgaaa aagctgtggc gcaagccgcg cacgcgcaag
      841 ctctaccgct acgacatcgc gatgctggtg aacccgggcg aggacctgcc gccgtcgaac
      901 aagaaggcgc tcaagcagtt catcgccgcc ggcagggagc tggcgatcga ggtcgacacc
      961 atcggcaagg acgactacca gcgcctcgcc gaatacgacg gcctgttcat ccgcgagacc
     1021 accgccagca acgaccacac ctaccgtttc gcccaccgcg ccgagcgcga gggcatggcg
     1081 gtgatcgacg acccgacctc gatcctgcgt tgcacgaaca agatcttcct caacgacctg
     1141 atgacctcgc gcaagctcgc ggtgccgcgc accgagatcc tgtaccgcga cgacgccaag
     1201 ggcatgaagg aagtcgccga gcggctcggc tacccgctgg tgctgaagat ccccgacggc
     1261 tcgttctcgc gtggcgtggt caaggtcgag gacgaggtcg cgctgggcaa ggccagcgat
     1321 gcgctgttcc agcacagcgc gctgctgctc gcgcaggaat acctctacac cgagttcgac
     1381 tggcgcatcg gcgtgctcaa ccgcgagccg ctgttcgcct gcaagtacta catgtcgcgc
     1441 ggccactggc agatctacaa tcacaacgcg aagggcggcg cgaaatccgg cggcttcgaa
     1501 accatcccgg tgcgcaaggc accggccgag gtggtcaagc tcgcgctgaa ggccaccaac
     1561 gccgtcggcg acggcctgta cggcgtggac ctgaagcacg tcaacggcaa ggcggtggtg
     1621 atcgaggtga acgacaaccc ctcgatcgac gctggcgtcg aggacgccta cctcggcgac
     1681 gagctctacc tgcgcgtgat gcgcgaattc ctgcgccgga tggagcgcaa gcgccagggc
     1741 atggcgcgct gagcgtcggc ggcttttccc gactcgaagc ccgggcacgg atagccggtc
     1801 gcaaagcggt cacgccggtg actgttctgc ggaagcgcgg cgaggcatga ggcggacgtg
     1861 cccgtgaaag gttccgcacg gcgcggaatc cttcatcggc accaaatcag tggcgcggcg
     1921 cactccggcg cgcctgccac gccagcagcg tgtcccgcgg caggcccggc tcgacgatca
     1981 gcagcaaggc cagcggcgtc gccaccagcc acaccagcgg cgcccagccg agcagggcgg
     2041 tgtgcgccgg caccaatgtg ctggcgagca gggcgctgcc gccgccgagc cagaccaagg
     2101 cggtggccag caggcgttcg tggcggcggg aatcgaggcg ttggcggcgc atggcggggc
     2161 tccggtggat gagccgccag cgtgccgcgg cggggtctca acgcttgcga cgggctgcgc
     2221 gcggaagtca cgcgacgccg gccatactat gcccaccccg tgcctggagg cgtgcatgac
     2281 ccagcccctg caattcgccg tgttcggcca cccgatcgcg cactcactgt cgccgcggat
     2341 ccaccggttg ttcgcgcagc agttttcgat cgagctggtg tatcgcgcga tcgacgt
//
LOCUS       DASSVL010000482         3033 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_194496, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000482 DASSVL010000000
VERSION     DASSVL010000482.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3033)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3033)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3033
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_194496"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1124)
                     /locus_tag="VFM52_08430"
     CDS             complement(<1..1124)
                     /locus_tag="VFM52_08430"
                     /inference="COORDINATES: protein motif:HMM:NF039643.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase domain-containing protein"
                     /protein_id="HET8765232.1"
                     /translation="MKNRHLLCSAIALVLASGVAWSAAAQVKPVQPHWNASTGEPSTE
                     SGLITSVPLRWDPDQYGNHRYTVAVDKPAAAVRATTPWHRRDPHPEDVATIVVGPDGQ
                     AVRNVVRARIDQAEGVLAFAAKQAGTYAIYYQPYVTSGSRNYPTVTYRKPADSADPAW
                     VKQQHLDDPRRVAKLPQARVLGYQAVDDFDAYTDMERTATPAEVQHLLAANPDQPWLL
                     FPETREHPIRMFTQLPERWAERGAGGDLTDHALRGEYLSFQVGLWTARAAAQDVRVSF
                     DDLRGPDGATIPASQLTCFNLGGIDDEGKPFANRLDVAQGRVQPLWMGLDIPADAKPG
                     VYRGTLTIRAAGATPQRVPLAITVGAGAAADHGDNDPFQLT"
     gene            complement(1170..>3033)
                     /locus_tag="VFM52_08435"
     CDS             complement(1170..>3033)
                     /locus_tag="VFM52_08435"
                     /EC_number="3.2.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008210148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="beta-galactosidase"
                     /protein_id="HET8765233.1"
                     /translation="RRRHFLKLGALGMAGTLAMDFRLRAGELSLPGKPMPRPDGKTHR
                     FSFGKRQFLLDGKPFQIMSGEMHPIRIPPVYWRQRIRMEKAMGLNTVSLYLMWNAYES
                     EPGVFDMTGGARDFVRFIRLCAEEGMWVYLRPGPFVAAEWDFGGLPSYLLRDPTIVVR
                     TKDDARYMAAVRRYFDHVAPRIAPLMVANGGPILMLQIENEYASYGRDLGYLEVLRQL
                     WLERGIEGPFSISDGLSQIQSTHTYLPGAALGLDGDTDFDAAQAIAGDHPVWMGEGYP
                     GWLSDWGDPGFQQDTFEPTLKQLLAAGRSFNLYVVHGGSNFGLTSSGGSRMDGSGFSS
                     VTTSYDYAAPINEHGAPTPAYHRFRELIAQHLHRRLPEVPATPPIAGFDPVVAKPVAS
                     LWDLLPTPRKVHEPRSNEELFGQNQGMVLYRKRVRGRRLQLTGVHDYATVFADGKYLD
                     YVSRIDKPGLHTSNAFALDGKERTLDLLIDSFGHIGFAQQRGDRKGLVGSALLDGRTL
                     LDWDVYPLPVDDALLQRVRRAPPPSAPDRPGLFFRAEVVRDVDADAYVDMGAWRKGYL
                     WVNGHLLGRYWNLGPQQRLYCPAPWWRKGANEILVLDFHRTHGASIHGATSLHD"
BASE COUNT          455 a         1032 c         1056 g          490 t
ORIGIN      
        1 gtgagctgga acgggtcgtt gtcgccgtgg tccgccgccg ccccggcccc cacggtgatc
       61 gccagcggca cccgctgcgg cgtggcgcct gccgccctga tcgtcaacgt gccgcggtag
      121 acgcccggct tcgcatcggc cggaatgtcc agccccatcc acagcggctg cacgcggccc
      181 tgcgccacgt ccagccggtt ggcgaacggc ttgccctcgt cgtcgatgcc gccgaggttg
      241 aagcaggtca gctgcgacgc cgggatggtg gcgccgtccg gcccgcgcag gtcatcgaag
      301 ctcacacgca cgtcctgtgc cgcggcgcgc gccgtccaca ggccgacctg gaagctcagg
      361 tattcgccgc gcaaggcatg gtcggtgaga tcgccgccgg cgccgcgctc ggcccagcgt
      421 tcgggcagct gggtgaacat gcggatcggg tgttcgcgcg tctccggaaa cagcagccag
      481 ggctggtccg gattcgccgc cagcaagtgc tgcacttcgg ccggcgtggc ggtgcgctcc
      541 atgtcggtgt aggcgtcgaa atcgtccacc gcctggtagc cgagcacgcg cgcctgcggc
      601 agcttcgcca cgcggcgcgg atcgtcgagg tgctgctgtt tcacccacgc cggatcggcg
      661 ctgtcggccg gcttgcgata ggtcaccgtg gggtagttgc gcgagccgct ggtgacgtag
      721 ggctggtagt agatcgcgta ggtgccggcc tgcttcgccg cgaacgccag cacgccctcg
      781 gcctggtcga tgcgcgcgcg caccacgttg cgcaccgcct ggccgtccgg gccgaccacg
      841 atggtggcca cgtcctcggg atgaggatcg cggcggtgcc agggggtggt cgcccgcacc
      901 gctgcggccg gcttgtccac ggccacggtg tagcggtggt tgccgtactg gtcggggtcc
      961 caacgcaagg gcaccgaggt gatcaacccc gactcggtcg agggttcacc ggtgctcgcg
     1021 ttccagtgcg gctgcaccgg cttgacctgc gccgccgcgg accacgctac gccgctcgcc
     1081 aggacgagcg cgatcgcgct gcagaggaga tgcctgtttt tcatgttcgt tacctggttc
     1141 gtatggggtg tcgcagtggt atgcgttgtt cagtcgtgca ggctggtggc gccgtggatc
     1201 gatgcgccgt gcgtgcggtg gaaatccagc accaggatct cgttggcgcc cttgcgccac
     1261 cacggcgccg ggcaatacag ccgctgctgc ggcccgaggt tccagtagcg cccgagcagg
     1321 tggccgttga cccacaggta gcccttgcgc cacgcgccca tgtccacgta ggcatcggcg
     1381 tcgacatcgc gcacgacctc ggcgcggaag aacaggcccg gccgatcggg cgctgacggc
     1441 gggggcgccc tgcgcacacg ctgcagcagc gcatcgtcca ccggcaaggg gtacacgtcc
     1501 cagtccagca gcgtccgacc gtccagcagc gcactgccga ccagcccctt gcggtcgccg
     1561 cgctgctgcg cgaagccgat gtggccgaaa ctgtcgatca gcaggtcgag cgtgcgctcc
     1621 ttcccgtcca gcgcaaatgc gttcgaggtg tgcaggccgg gcttgtcgat gcgcgagacg
     1681 tagtccaggt acttgccgtc ggcgaacacc gtggcgtagt cgtgcacgcc tgtgagttgc
     1741 agtcggcgtc cgcgcacgcg cttgcgatag agcaccatgc cctggttctg gccgaacagt
     1801 tcttcgttgg aacgcggctc gtgcaccttc cgcggcgttg gcaacagatc ccacagcgag
     1861 gccaccggct tcgccacgac cgggtcgaaa cctgcgatcg gcggcgtcgc cggcacctca
     1921 ggcaggcgac gatgcaggtg ctgtgcgatc agctcgcgga agcggtggta ggccggcgtc
     1981 ggcgcgccgt gctcgttgat cggcgccgcg tagtcgtagc tcgtcgtcac cgacgagaac
     2041 ccgctgccgt ccatgcgcga gccgccgctg gaggtgaggc cgaagttgct gccgccgtgc
     2101 accacgtaga ggttgaagga acgcccggcg gccagcagtt gcttcagcgt cggctcgaac
     2161 gtgtcctgct ggaaaccggg atcgccccag tcggacagcc agccggggta gccctcgccc
     2221 atccataccg gatggtcgcc ggcgatcgcc tgcgccgcgt cgaaatcggt gtcgccatcc
     2281 aggcccagcg ccgcgcccgg caggtaggtg tgggtggact ggatctggct gagtccgtcg
     2341 gaaatcgaga acggaccttc gataccgcgt tccagccaca actggcgcag cacttcgaga
     2401 tagccgaggt cgcgcccgta cgaggcgtat tcgttctcga tctgcagcat caggatcggc
     2461 ccgccattcg ccaccatcag cggcgcgatg cgcggcgcca cgtgatcgaa gtaacggcgc
     2521 accgccgcca tgtagcgtgc gtcgtccttg gtgcgcacga cgatggtcgg atcgcgcagc
     2581 aggtacgacg gcaacccgcc gaaatcccac tcggcggcga cgaaggggcc gggccgcagg
     2641 tacacccaca tgccctcctc cgcgcacagg cggatgaagc gcacgaagtc gcgcgcgccg
     2701 cccgtcatgt cgaacacgcc gggttcggac tcgtaggcgt tccacatcag gtacaggctg
     2761 acggtgttga ggcccatcgc cttctccatg cggatgcgct gccgccagta caccggcggg
     2821 atgcggatcg gatgcatctc gccactcatg atctggaacg gcttgccgtc gagcaggaac
     2881 tgccgcttgc cgaagctgaa acggtgggtc ttgccgtcag gcctcggcat gggcttacca
     2941 ggcagggaaa gctcgccggc acgcaggcgg aaatccatgg ccagcgtgcc ggccatgccg
     3001 agggcgccga gtttcaggaa gtgcctgcgc cgc
//
LOCUS       DASSVL010000483         3638 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_844183, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000483 DASSVL010000000
VERSION     DASSVL010000483.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3638)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3638)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3638
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_844183"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(78..1421)
                     /gene="rlmD"
                     /locus_tag="VFM52_08440"
     CDS             complement(78..1421)
                     /gene="rlmD"
                     /locus_tag="VFM52_08440"
                     /EC_number="2.1.1.190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007511296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008173 - RNA methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (uracil(1939)-C(5))-methyltransferase
                     RlmD"
                     /protein_id="HET8765234.1"
                     /translation="MSRPRSRPPASTAEFEADITSLGHDGRGVARIDGKAVFVTGALA
                     GEHVRLRIRQRHRHYDEADTVEVLVASPDRVVPKCPHFGVCGGCTLQHLSPAAQIAGK
                     QQVLAENFARIGKVEPREWLPPLTDALWNYRRHGRLSVRAVPKKGRVLVGFREAANPR
                     YVADLRHCDVVHPQLGERIEKLGDLLGTLEGAANIPQIEFAAGDDTVALVFRHMQPLS
                     EHDRQALIAFAQAEGFAIYLQPGGITSVAPLWPASPRLSYTLSPGGGAADVELEFQPL
                     DFVQVNGGMNRKMLAHAMQLLDPQPGDRVLDLFCGLGNFTLPLARRVAEVAGVEGEHG
                     LVERAAANAQHNGIANAQFHVANLFEDQRGAEWARTPWDKLLLDPPRAGADQVLAHLP
                     HKATRRVVYVSCHPASLARDAGILVHQHGYTLRAAGVMDMFPHTAHVESIALFER"
     gene            complement(1495..2091)
                     /locus_tag="VFM52_08445"
     CDS             complement(1495..2091)
                     /locus_tag="VFM52_08445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015447996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdbL family protein"
                     /protein_id="HET8765235.1"
                     /translation="MRKSTCFIVALLAVVLAGCVTINVYFPEASAQKAADQFVGNVLG
                     ATPAKPQPAPVTPPPAKSGPSASVLDLLIPAAQAADAPNLRIQTPAVQAIQARMRTRF
                     ETELQGLLDSGAAGFTNDGMVALRDAAKVPLAQRAQAAAAVADENRDRAALYREIADA
                     NAHPEWEAQIRATFAKTWIERAHAGWYYQDAGGNWQRK"
     gene            complement(2131..>3638)
                     /locus_tag="VFM52_08450"
     CDS             complement(2131..>3638)
                     /locus_tag="VFM52_08450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015447997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8765236.1"
                     /translation="DGRVDADLAVDVRDRQLQSSGQFTLAGVGFDTPNGKLAGAALNG
                     NGRFSLDAGPEATRWSVQGNLAGGELLVGDMYAKLPTHPLQLELTALARHGTLDVERL
                     RVNDADALQLDGSFALDAKAGLQRLRINRFHASFPAAYDRYGRTWLATLGVRDARVTG
                     HLSGQLDWAADGLRAFAFTTDGLDLVDANGRFGVTGLRGGLDWAGKGERPATSLAWRS
                     LRVYRLEAGAAQSTWRTYTGSLELQSPFAIPLYKGQLHVARVDYRPTATKTQRLATSL
                     AVTGVDMASLSRALGWPAFSGTLGGAIPSLRWQGDRLDLAGGLSINVFGGFIDVTRLA
                     LQQPFGDAPVLTGNLQLSQLDLGVLTGVFDFGSITGHLDGRIDDLRMVAWSPVAFKAS
                     LLAADGGRISQRAVNNLTVVGGGSLAGGLQGAVLKLFKTFGYKRIGLNCTLHGAVCDM
                     SGLKEQDGGYTIVEGSGLPHLEVIGHQTRVDWPTLVHRLRDAVKGNAPIVR"
BASE COUNT          568 a         1297 c         1234 g          539 t
ORIGIN      
        1 cgcgcgccag ccgtcggtgc gcagcaggaa tttcctctcg atctcgatgc ccatgtggtc
       61 gatcgctccg tagccgctca gcgctcgaat agagcgatcg attcgacgtg cgcggtgtgc
      121 gggaacatgt ccatcacccc cgccgcgcgc agcgtgtagc cgtgctggtg cacgaggatg
      181 ccggcatcgc gcgcgagcga cgccgggtgg caggacacgt acaccacgcg ccgcgtcgcc
      241 ttgtgcggca ggtgggccag cacctggtcg gcgccggcgc gcggcggatc gagcagcagc
      301 ttgtcccacg gcgtgcgcgc ccactcggcg ccgcgctggt cctcgaacag gttggccacg
      361 tggaactgcg cgttggcgat gccattgtgc tgcgcgttcg ccgccgcgcg ttccaccagc
      421 ccgtgctcgc cttcgacgcc ggcgacctcg gccacccgcc gcgccagcgg caaggtgaaa
      481 ttgcccagcc cgcagaagag atccagcacg cggtcgcccg gctgcgggtc gagcagctgc
      541 atcgcgtgcg ccagcatctt gcggttcatg ccgccgttga cctgcacgaa atccagcggc
      601 tggaactcca gctccacatc cgccgcgcca ccgcccggcg acagcgtgta gctgagccgc
      661 ggtgatgccg gccacagcgg cgcgacgctg gtgatgccgc cgggctgcag gtagatcgca
      721 aagccctcgg cctgggcgaa cgcgatcagc gcctgccggt cgtgctcgct gagcggctgc
      781 atgtggcgaa acaccagcgc cacggtgtca tcgccggcgg cgaactcgat ctgcgggatg
      841 ttcgcggcgc cctccagcgt gccgagcagg tcgcccagct tctcgatgcg ttcgccaagc
      901 tgcggatgca ccacgtcgca gtggcgcagg tcggcgacat agcgcgggtt ggccgcctcg
      961 cggaaaccca ccagcacgcg ccccttcttg ggcaccgcgc gcaccgacag gcggccgtgg
     1021 cggcggtagt tccacaacgc atcggtcagc ggcggcagcc actcgcgcgg ctcgaccttg
     1081 ccgatgcggg cgaagttttc cgccagcacc tgctgcttgc cggcaatctg tgcggccggc
     1141 gaaaggtgct gcaaagtgca gccgccgcac acgccgaaat gcgggcactt gggcaccacg
     1201 cgatccggcg aggcgaccag cacctcgacc gtgtcggcct cgtcgtagtg gcgatggcgc
     1261 tggcggatgc gcagccgcac gtgctcgccc gccagcgcac cggtgacgaa caccgccttg
     1321 ccatcgatgc gcgcgacgcc gcggccatca tggccaagcg acgtgatgtc ggcttcgaac
     1381 tcggcggtgg atgctggtgg acgggaacgg ggacgtgaca tgatccgcgg acttcagcgc
     1441 aagggcagac cgcgcattat cgcggaaccg caccgccggc gtcgcccgcc ctgctcactt
     1501 gcgctgccag ttgccgcctg cgtcctggta ataccagccg gcgtgcgcgc gctcgatcca
     1561 ggtcttggcg aacgtcgcgc ggatctgcgc ctcccattcg gggtgcgcat tggcgtcggc
     1621 gatctcgcgg tacagcgcgg cgcggtcgcg gttttcgtcg gccaccgcag ccgccgcctg
     1681 tgcgcgctgc gcgagtggca ccttggccgc gtcgcgcaag gccaccatcc catcgttggt
     1741 gaagccggca gcgccactgt ccagcaaccc ctgcagctcg gtctcgaagc gcgtacgcat
     1801 gcgcgcctgg atcgcctgca ccgccggggt ctggatgcgc aggttcggcg catcggcagc
     1861 ctgcgcggcg ggaatcagca ggtccagcac gctggccgac ggcccggact tcgcgggcgg
     1921 cggcgtgacc ggggccggct gcggctttgc cggggtcgcg cccagcacgt tgccgacgaa
     1981 ctggtcggcc gccttctgcg cagaggcctc cggaaaatac acattgatcg tcacgcaccc
     2041 ggcaagcacg acggccagca aggcgacgat gaaacaggtg gatttgcgca tggaaggccc
     2101 ctgtagcgac ttgtggaaaa cacggcagga tcagcgcacg atcggtgcat tgcccttgac
     2161 ggcatcgcgc aaccgatgca cgagcgtggg ccagtcgacc cgcgtctgat ggccgatgac
     2221 ctcgaggtgc ggcagaccac tgccttccac gatagtgtag ccgccgtcct gctccttcaa
     2281 tccgctcatg tcacacaccg cgccgtgcag cgtgcagttg agcccgatgc gcttgtagcc
     2341 gaaggtcttg aacaacttga gcaccgcgcc ctgcagcccg cccgcgaggc tgccgccgcc
     2401 gaccaccgtg agattgttca ccgcccgctg gctgatgcgc ccgccatcgg ccgccagcag
     2461 cgatgccttg aaggccaccg gactccaggc gaccatgcgc aggtcgtcga tgcggccgtc
     2521 caggtgaccg gtgatgctgc cgaaatcgaa cacgccggtc agcacaccga gatccagctg
     2581 gctcagctgc aggttgccgg tgagtaccgg cgcatcgccg aacggctgct gcagcgccag
     2641 gcgggtgacg tcgatgaagc cgccgaacac gttgatcgac aggccaccgg caaggtcgag
     2701 ccgatcaccc tgccagcgca gcgagggaat tgcgccgccc agcgtgccgg agaacgccgg
     2761 ccagccgagc gcccggctca ggctggccat gtcgacaccg gtcaccgcca ggctggtcgc
     2821 caggcgctgg gtcttcgtcg ccgtcggccg gtagtcgacc cgtgccacgt gcaattgccc
     2881 cttgtacagc gggatcgcga acggcgactg cagttcgagc gagccggtat aggtccgcca
     2941 cgtggattgc gccgcgccgg cctcgagccg atagacccgc agcgagcgcc aggcaaggct
     3001 ggtcgccggg cgctcgccct tccccgccca gtcgaggcca ccacgcagcc cggtcacgcc
     3061 aaaacgcccg ttggcgtcga ccaggtcgag gccgtcggtg gtgaacgcaa aggcgcgcaa
     3121 gccgtcggcc gcccaatcca gctgcccgct caagtggccg gtgacacgcg cgtcacgcac
     3181 gccgagcgtc gccagccagg tccgcccgta gcgatcgtac gcggccggga aactggcgtg
     3241 gaaacgattg atccgcagcc gctgcaaacc ggccttggca tcgagggcga agctgccgtc
     3301 gagctgcaac gcgtcggcgt cgttcacccg cagccgctcc acgtcgaggg tgccgtggcg
     3361 cgccaatgcc gtgagctcga gttgcagggg gtgcgtcggc agcttggcgt acatgtcgcc
     3421 cacgagcagt tcgccgccgg ccaggttgcc ctgcaccgac catcgtgtcg cttccgggcc
     3481 ggcatccagg ctgaagcgcc cgttgccgtt cagtgcggcg ccggccagct tgccgttcgg
     3541 ggtatcgaac ccgacgcccg ccagcgtgaa ttgccccgag gactgcaatt gccgatcgcg
     3601 cacgtcgacg gcgaggtccg catccacgcg accatcgc
//
LOCUS       DASSVL010000484         3209 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_660897, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000484 DASSVL010000000
VERSION     DASSVL010000484.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3209)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3209)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3209
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_660897"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..908
                     /locus_tag="VFM52_08455"
     CDS             <1..908
                     /locus_tag="VFM52_08455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008217320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="pyridoxal-phosphate dependent enzyme"
                     /protein_id="HET8765237.1"
                     /translation="ARSLYLYALCNGRLHEGQAVVDASSGSTAISEAWFARLLGLKFT
                     AVMPAVTAPRKIHAVQALGGTCDLVDDAGQVHARAAEHAAQGACHLDQFGLAVQATDW
                     RGNNNIAESIINQMTREPHPSPAWIVCGVGTGGTSATIGRYLRYRRLPTNLCVAEPTG
                     SAFVEGWRSRRRDAVARQPTLIEGIGRPRVEPGFTFEVVDDVIEVPDAAAIAGAWLLE
                     NLFGRRYGGSSGTNLVACLQLAAGMRERGQQGSIVSLLCDPGERYAETLFNPAWLAEH
                     RIDIGPAGDALRACVATGRWTALPA"
     gene            946..1704
                     /locus_tag="VFM52_08460"
     CDS             946..1704
                     /locus_tag="VFM52_08460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007080574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004665 - prephenate dehydrogenase (NADP+)
                     activity [Evidence IEA];
                     GO_function: GO:0008977 - prephenate dehydrogenase (NAD+)
                     activity [Evidence IEA];
                     GO_function: GO:0070403 - NAD+ binding [Evidence IEA];
                     GO_process: GO:0006571 - tyrosine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydrogenase/arogenate dehydrogenase
                     family protein"
                     /protein_id="HET8765238.1"
                     /translation="MILALFGYGRFGRAFADLVAHAGHTVRVVDPAATVPAGYACDTA
                     AHALDGAQWAVLAMPVPHLEAALRALRPLLAPQHTVIDVGSVKQHPCRLLDEYLGDAV
                     PHAGTHPLFGPLSIARGEPRRTVVCASARHPQAAARTRALFTELGCSVIDKDPATHDH
                     AMAKTHALAFFIARALVEMGVGDDLSMAPPSFLGLANMLAAVRGDAGHLFAAIQRENP
                     YAGAARAELIEHLARIHGRLLASDDAMPIPPPAQ"
     gene            complement(1711..2010)
                     /locus_tag="VFM52_08465"
     CDS             complement(1711..2010)
                     /locus_tag="VFM52_08465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007507567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8765239.1"
                     /translation="MASEIDYIVAWQCIGCGKIEAPQPCIGVCQDRKVLMVGKGDYEA
                     VLAQRDALQARLDRTRAMLQRFGLAKPRSGQWQQSWEALQEELRAASRLLDGDPA"
     gene            complement(2091..2558)
                     /locus_tag="VFM52_08470"
     CDS             complement(2091..2558)
                     /locus_tag="VFM52_08470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017463285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnrO protein"
                     /protein_id="HET8765240.1"
                     /translation="MRRLITLSALVAGIVVVLVAPVTALAQHDHPVAGPAVTAPPAHP
                     WPADATLSANMARIHDTLDRLRHYEMGHMDATLARDQADVIAESASEIFTKCKLPPER
                     DAVLHGMLVPLLAATQKFKTDPADAAQIAAMREAVAAYPRYFEAPGWQASPAH"
     gene            complement(2674..>3209)
                     /locus_tag="VFM52_08475"
     CDS             complement(2674..>3209)
                     /locus_tag="VFM52_08475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007805665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016209 - antioxidant activity [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="redoxin domain-containing protein"
                     /protein_id="HET8765241.1"
                     /translation="GLTDVTGRHVEVGVASGRRTLLCFFRDPACPFCNYRVYELTFRF
                     DEFARLGLDVIAVFAADDESVKRFVAKKPRPFPVIADPQSVLYAAYGVQHFSRWGKVK
                     ALFTRLPTLIKGLRLVGLAGLRTTNRMPADFLIDERGRIAETWYGRDAGDRIPLERVE
                     LFAARGLVRRTPAASAA"
BASE COUNT          466 a         1189 c         1086 g          468 t
ORIGIN      
        1 tcgcccgctc gctctacctg tacgcgctgt gcaacggccg cctgcatgaa ggccaggccg
       61 tggtcgacgc ttcctcgggc agcaccgcga tttccgaggc ctggttcgcg cgcctgctcg
      121 gcctcaagtt caccgccgtg atgccggcgg tgaccgcgcc gcgcaagatc cacgcggtgc
      181 aggcgctggg cggcacctgc gacctcgtcg acgacgccgg ccaggtgcac gcgcgcgcag
      241 cggaacacgc cgcccagggc gcctgccatc tcgaccagtt cggcctggcg gtgcaggcca
      301 ccgactggcg cggcaacaac aacatcgccg agtcgatcat caaccagatg acgcgcgagc
      361 cgcatccgtc gccggcgtgg atcgtgtgcg gtgtcggcac cggcggcacc tcggccacca
      421 tcggccgcta cctgcgctac cgccgcctgc ccaccaacct gtgcgtggcc gaacccaccg
      481 gcagcgcgtt cgtggaaggc tggcgctcgc gccgccgcga tgccgttgcg cggcagccga
      541 cgctgatcga gggcatcggc cggccgcgcg tcgagccggg cttcacgttc gaggtggtgg
      601 acgacgtgat cgaggtgccg gacgcggcgg cgatcgccgg cgcgtggctg ctggaaaacc
      661 tgttcggtcg ccgctacggc ggctcctcgg gcaccaacct cgtcgcctgc ctgcagcttg
      721 ccgccggcat gcgcgaacgc ggccagcaag gcagcatcgt gagcctgctg tgcgacccgg
      781 gcgagcgcta cgccgagacg ctgttcaatc ccgcgtggct cgccgagcat cgcatcgaca
      841 tcggtccggc cggcgatgcg ctgcgcgcct gcgtggcgac gggccgctgg accgcattgc
      901 cggcctgacg cgcgtgcgcc ccgcctgcca tccacggagc tgccgatgat ccttgcgctg
      961 ttcggctacg gccgtttcgg ccgcgcgttc gccgacctcg tcgcgcacgc cggccacacc
     1021 gtgcgcgtgg tcgatcccgc cgccaccgtg ccggccgggt acgcctgcga caccgccgcg
     1081 cacgcgctcg acggtgcgca gtgggcggtg ctggcgatgc cggtgccgca tctcgaagcc
     1141 gcactgcgcg cactgcggcc gctgcttgcg ccgcagcaca ccgtaatcga cgtcggcagc
     1201 gtcaaacagc acccgtgccg attgctggac gagtacctcg gcgacgccgt tccccacgcc
     1261 ggcactcatc ccctgttcgg cccgctcagc atcgcgcgcg gcgaaccgcg acgcaccgtg
     1321 gtctgcgcca gcgcccggca tccgcaggcc gcggcacgta cgcgtgcgtt gttcaccgag
     1381 ctgggctgca gcgtgatcga caaggacccg gccacccacg atcacgcgat ggcgaagacc
     1441 cacgcactgg cattcttcat tgcccgcgcg ctggtcgaga tgggcgtcgg cgacgacctg
     1501 tcgatggcgc cgccctcgtt tctcggcctg gccaacatgc tggccgccgt gcgcggcgat
     1561 gccggccacc tgttcgccgc gatccagcgc gagaacccgt atgccggtgc ggcgcgcgcg
     1621 gaactcatcg aacacctcgc acgcatccac ggccgcctgc tggcgagcga cgacgcgatg
     1681 ccgatcccgc ccccggcgca gtgagccgcg tcaggcggga tcgccgtcga gcaggcgcga
     1741 cgccgcgcgc agttcctctt gcagggcttc ccacgactgc tgccactgcc cgctgcgcgg
     1801 cttggcgagg ccgaagcgct gcagcatcgc gcgcgtccgg tcgagccggg cctgcaacgc
     1861 atcgcgctgc gccaggaccg cttcgtagtc gcccttgccg accatcagca ccttgcggtc
     1921 ctggcacacg ccgatgcacg gctgcggcgc ctcgatcttg ccgcaaccga tgcactgcca
     1981 cgccacgatg taatcgatct cgctcgccac gccgcactcc tcgccagaga taacccaccc
     2041 gcacccgcca tgccgccggc cgccatcgag ccgccaacgg ttgccgcgct tcagtgcgcg
     2101 ggcgacgcct gccagcccgg cgcctcgaaa taccgcggat acgcagccac cgcctcgcgc
     2161 atcgcggcga tctgcgccgc gtccgccgga tcggtcttga acttctgcgt cgccgccagc
     2221 agcggtacca gcatcccgtg cagcaccgcg tcgcgctcgg gtggcagctt gcacttggtg
     2281 aagatctcgc tggccgactc ggcgatcacg tcggcctggt cacgcgcaag cgtggcgtcc
     2341 atgtggccca tctcgtaatg gcgcagccgg tccagggtgt cgtggatgcg cgccatgttg
     2401 gcgctgagcg tcgcatcggc cggccacgga tgtgctggcg gtgcggttac cgctggtccg
     2461 gcgaccgggt ggtcgtgttg ggcaagtgcc gtgaccggcg cgacaaggac gacgacgatg
     2521 ccggcaacca gggcggacaa cgtgatgagt cggcgcatgg cggaaggctc gatggacggg
     2581 gatgcggtga tcttcgacga tgccgcgcgg cgctgcttga ccaggcgcaa atcaacaccc
     2641 atccgccctg cgacacgttg ccacggcggc gaatcaggcc gcgcttgccg ccggcgtgcg
     2701 gcgcaccagc ccgcgtgcgg cgaacaactc cacgcgctcg agcgggatgc ggtcgcccgc
     2761 gtcgcgccca taccaggtct cggcgatccg gccccgctcg tcgatgagga aatccgccgg
     2821 catccggttc gtggtcctga ggccggcgag gccgacgagg cgcagcccct tgatgagcgt
     2881 cggcaagcgg gtgaacagcg ccttgacctt gccccagcgc gagaagtgct gcacgccgta
     2941 ggcggcgtac agcaccgact gcggatcggc gatgaccggg aacgggcgcg gcttctttgc
     3001 cacgaagcgc tttacgcttt catcgtcggc ggcaaacacg gcaatgacgt cgagtccgag
     3061 ccgcgcgaat tcatcgaagc ggaacgtcag ctcgtacacg cggtagttgc agaacgggca
     3121 tgccggatca cggaagaagc acagcagcgt gcgccggccg ctggccacgc ccacttcgac
     3181 gtgccggccg gtgacgtccg tgaggccca
//
LOCUS       DASSVL010000485         2511 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_576297, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000485 DASSVL010000000
VERSION     DASSVL010000485.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2511)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2511)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2511
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_576297"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..315)
                     /locus_tag="VFM52_08480"
     CDS             complement(<1..315)
                     /locus_tag="VFM52_08480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005927840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Bax inhibitor-1/YccA family protein"
                     /protein_id="HET8765242.1"
                     /translation="MQSGNPALNKNTVLDAASGAVVSHGDEVMTLNGTVNKTGLLLIL
                     AIVGAAFSWGQFNGAESLPTMGPLMIGGAIGGLILALVTVFKKTWAPVTAPLYALVEG
                     VFI"
     gene            457..1374
                     /gene="hemC"
                     /locus_tag="VFM52_08485"
     CDS             457..1374
                     /gene="hemC"
                     /locus_tag="VFM52_08485"
                     /EC_number="2.5.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007512233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004418 - hydroxymethylbilane synthase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylbilane synthase"
                     /protein_id="HET8765243.1"
                     /translation="MNPSTLRIATRKSALALWQAEHVAALLRAAHPGLGVELVPLSTR
                     GDEILDQPLATIGGKGLFLKELEVAMLEGRAELAVHSLKDVPADLESGFTLPAILPRA
                     DAADAFVSNHYADLAALPRGARVGTSSLRRQAQLRALRPDLQLSDLRGNVGTRLGKLD
                     AGQYDAIVLACAGLERLGLASRIVSRLAAPDWLPAPGRAAIAIEARDEHPAVLALLAA
                     LDDADTRLTVSAERAMNRALGGSCTVPVGAWCMRSDHGLHLRGLVGDAASGQLLHAEG
                     SAPADQAEALGRQVAQALLAQGAGKLLGT"
     gene            complement(1493..2290)
                     /locus_tag="VFM52_08490"
     CDS             complement(1493..2290)
                     /locus_tag="VFM52_08490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008438782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF481 domain-containing protein"
                     /protein_id="HET8765244.1"
                     /translation="MNKTLIGGLLLAGFASFAAHAQDTENRGGWSGSGEFGFASSTGN
                     SRSENINAKLGLSQENDQWKNNFFVDALRSKSEQKIVDTNGNTIEQFNTTANRYDAGA
                     SVGLKLDTRSYIVGAARYEHDDFGANLWQGTVSLGYGYIALKDERNELSFEIGPGYKR
                     YRPADTQVLVGNVLVAQRQPTEGEVVARGLVNYKFKLSANTAFEDTFLTEAGSKNTYI
                     QNDAGLAVSMTKKLALKVGFQVRYNSDVQPGVKQTDTLTTTNLVYSF"
BASE COUNT          367 a          860 c          863 g          421 t
ORIGIN      
        1 gatgaagacg ccctccacca gcgcgtacaa cggcgcggtg accggcgccc aggttttctt
       61 gaacacggtg accagggcca ggatcaggcc gccgatggcg ccgccgatca tcagcgggcc
      121 catcgtcggc aggctctccg caccgttgaa ctggccccag ctgaaggccg cgccgacgat
      181 ggcgaggatc agcagcaggc cggtcttgtt gaccgtgccg ttgagagtca tcacctcgtc
      241 gccatgcgac accaccgcac cgctggcggc gtcgaggacg gtgttcttgt tgagtgccgg
      301 attaccgctt tgcatgatga actccgaggg gtttgtcgac atcgtagccg gcccgcgacg
      361 accgtgtcag ccaccgcgcc caaacgtcgc gggctggcca cgccgcaccg ggccggtcaa
      421 ctacaatggg accttgccga acgtcgcgga gttccaatga acccttccac cttgcgcatc
      481 gccacccgca agagcgcgct ggcgctgtgg caggccgaac acgtcgccgc gctgctgcgc
      541 gcggcgcacc ccggcctggg cgtggagctg gtgccgctgt ccacccgcgg cgacgagatc
      601 ctcgaccagc cgctggccac catcggcggc aagggactgt tcctcaagga gctggaagtg
      661 gccatgctgg aaggccgcgc cgagctggcg gtgcactcgc tgaaggacgt gccggccgat
      721 ctcgagagcg gcttcaccct gccggccatc ctgccccgcg ccgacgccgc cgacgctttc
      781 gtcagcaacc actacgccga cctcgccgcg ctgccgcggg gcgcgcgcgt gggcacctcg
      841 tcgctgcgcc ggcaggcgca actgcgcgcg ctgcggccgg atctgcagct gagcgacctg
      901 cgcggcaacg tcggcacccg gctgggcaag ctcgacgccg gccagtacga cgcgatcgtg
      961 ctggcctgcg ccgggctgga acgcctcggc ctggcctcgc gcatcgtctc gcgactggcc
     1021 gcgccggact ggcttcccgc cccgggccgg gccgccatcg cgatcgaggc gcgcgacgag
     1081 catccggcgg tgctggccct gctcgccgcg ctcgacgacg ccgacacgcg gctcacggtg
     1141 agcgccgagc gcgcgatgaa ccgcgccctg ggcggcagct gcacggtgcc ggtcggcgcc
     1201 tggtgcatgc gcagcgacca cggcttgcac ctgcgcggcc tcgtcggcga cgcggccagc
     1261 ggccagctgc tgcacgccga aggcagcgcg ccggcggatc aggccgaggc actcggtcga
     1321 caggtggcgc aggcgttgct cgcgcaaggg gcgggcaaac tgctggggac gtgagccgac
     1381 gctgtcacgc tcctgcagtc catgcggcag cgacccacgg cgggcagtgc ccgccaccgc
     1441 ccgtgcgggg gagcggcggg cggtgcccgc cctgccactg cccatccggc gctcagaagc
     1501 tgtacacgag attcgtcgtg gtcagcgtat cggtctgctt cacgcccggc tgcacgtcgc
     1561 tgttgtagcg gacctggaag cccactttca gggccagctt cttggtcatg ctgacggcca
     1621 ggccggcgtc gttctggatg taggtgttct tggagcccgc ttcggtgagg aacgtgtcct
     1681 cgaaggcggt gttggcgctc agcttgaact tgtagttgac caggccgcgg gccaccactt
     1741 cgccttcggt gggctggcgc tgggcgacca gcacgttgcc gaccagcacc tgggtgtcgg
     1801 cgggacggta gcgcttgtag ccggggccga tttcgaacga cagctcgttg cgctcgtcct
     1861 tcagcgcgat atagccgtag cccagcgaga ccgtgccctg ccacaggttg gcgccgaagt
     1921 cgtcgtgctc gtagcgggcc gcgccgacga tgtagctgcg cgtgtcgagc ttgaggccga
     1981 ccgaggcgcc ggcgtcgtag cggttggcgg tggtgttgaa ctgctcgatc gtgttgccat
     2041 tggtgtcgac gatcttctgc tcgctcttgg agcgcagcgc gtcaacgaag aagttgttct
     2101 tccactggtc gttttcctgg ctcaggccca gtttggcgtt gatgttctcc gagcgcgagt
     2161 tgccggtgga cgaggcgaaa ccgaattcgc ccgaaccgct ccagccgccg cgattttccg
     2221 tgtcctgggc gtgggcggcg aagctggcga aaccggccag cagcaggccg ccgatcaggg
     2281 tcttgttcat tgccgaatat ccgtttgtta aagtttggta acagcgtacc ttagccagcc
     2341 gtcttgaact cgcagtgaat gcgccggccc gccgtgcgac ttgcagccat ccacggccgc
     2401 caccatgcta ggacgtgccc cgcccgagac gtgccgaatg gatcgctacg aacggatatt
     2461 gacgctgcat cgcctgctga aatcggcgca ctatccggtg ccgttgtcgc g
//
LOCUS       DASSVL010000486         4755 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_986354, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000486 DASSVL010000000
VERSION     DASSVL010000486.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 4755)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4755)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4755
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_986354"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1575)
                     /gene="argS"
                     /locus_tag="VFM52_08495"
     CDS             complement(<1..1575)
                     /gene="argS"
                     /locus_tag="VFM52_08495"
                     /EC_number="6.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007514402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004814 - arginine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006420 - arginyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arginine--tRNA ligase"
                     /protein_id="HET8765245.1"
                     /translation="MKAQLHELIIEAIHALQGQAVLPTDLSVPAFVIERTRSREHGDF
                     TTNVAMLLAKAARTKPRELAEQLVAALPANAEVAKVEIAGPGFINFFLAADASQALVR
                     RILEQGERYGRNATGAGRTVGVEFVSANPTGPLHVGHGRNAALGDCAARLLDATGWAV
                     KREFYYNDAGVQIANLAASTQARARGIAPGDAGWPENGYRGDYIADVADAYLAGASVS
                     VEGQTVTGAKDPDNLDAIRAFAVAYLRHEQNLDLAAFGVGFDVYFLESSLYADGKVEE
                     TVRELTAHGYTYEEGGALWLKTTAFGDDKDRVMRKSDGTYTYFVPDVAYHLSKWQRGY
                     GKAITVLGSDHHGSLARVKAGLQALDCGIPPGYPDYLLYQMVTVMRGGEEVKISKRAG
                     SYVTLRDLIDEVGRDATRYFLIARKADSQLVFDIDLARSQTNDNPVYYIQYAHARVCS
                     VLRQAGEKGHAIDQANGLAHLARLDNEHEQVLLTELSRYPEIVESAAANLEPHLLAVW
                     LRDLANAFHTYYNACQF"
     gene            complement(1912..2583)
                     /gene="radC"
                     /locus_tag="VFM52_08500"
     CDS             complement(1912..2583)
                     /gene="radC"
                     /locus_tag="VFM52_08500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007082562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadC"
                     /protein_id="HET8765246.1"
                     /translation="MSIRDWPEGERPREKLLERGSDALSDAELLAVLLGSGVRGKDAI
                     ALAREILVAAGSLSALLARPDQAARIGGLGPAKRARIAAALELARRSLAEQLREAPAI
                     ANPRDSGSYLRARLRHLPYEVFGCLFLDNRHRVLGFEELFRGTVDGASVHPREVVRAC
                     LEHNASAVIFAHNHPSGVAEPSAADRAITRDLRDALQTIGVRVLDHLVIGAGEPVSMA
                     ARGLI"
     gene            2679..3884
                     /gene="coaBC"
                     /locus_tag="VFM52_08505"
     CDS             2679..3884
                     /gene="coaBC"
                     /locus_tag="VFM52_08505"
                     /EC_number="4.1.1.36"
                     /EC_number="6.3.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007514397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004632 - phosphopantothenate--cysteine
                     ligase activity [Evidence IEA];
                     GO_function: GO:0004633 - phosphopantothenoylcysteine
                     decarboxylase activity [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0015939 - pantothenate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional phosphopantothenoylcysteine
                     decarboxylase/phosphopantothenate--cysteine ligase CoaBC"
                     /protein_id="HET8765247.1"
                     /translation="MSLAERRILLGVAGGIAAYKSCELVRRLRDAGAEVRVVMTAGAE
                     HFVGTATFQALSGQPVRTSLWDASAEAAMGHIELARWAERIVVAPASADVIARLAQGR
                     ADDLLATLCLASDAPLYLAPAMNRHMWAHPAVQANMATLRARGVHVLGPDSGAQACGD
                     VGAGRMVEPEALRDALAASFGTGALGGLALVVSAGPTFEDIDPVRFIGNRSSGKMGFA
                     VAQAAVEAGAQVTLVAGPVSLSTPAGVAKRVNVRSAAHMQQAVHAACADAQIYVGAAA
                     VGDYRPVACAPRKLKKQAGADLVLELAENPDILASLSAMPAHPFLVGFAAETHEVERY
                     AQDKLARKGLDMIAANRVGDGLGFDSADNALDVFWADGHRPLPRASKIELARQLVACI
                     AERYRAARG"
     gene            3889..4344
                     /gene="dut"
                     /locus_tag="VFM52_08510"
     CDS             3889..4344
                     /gene="dut"
                     /locus_tag="VFM52_08510"
                     /EC_number="3.6.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019398196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004170 - dUTP diphosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0006226 - dUMP biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0046081 - dUTP catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dUTP diphosphatase"
                     /protein_id="HET8765248.1"
                     /translation="MLDVQLKILDPRMGESIPLPAPATPGSAGMDLRAALDTPLTLAP
                     GESVLVPSGMAIHIGDPGWCALVVPRSGLGHRHGVVMGNLVGVIDADYQGPLMISCWN
                     RGREPYTIGVGDRIAQLLLVPVAQARLTRVDEFAPSARGSGGFGSTGIR"
     gene            4447..>4755
                     /locus_tag="VFM52_08515"
     CDS             4447..>4755
                     /locus_tag="VFM52_08515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomannomutase/phosphoglucomutase"
                     /protein_id="HET8765249.1"
                     /translation="MWPLAAGTAFLLVGVFCAWQTWLIADEAHAAERVVRARDVVVQD
                     LARTVARQRGAVESAVAKLPPTALQADHAQLVATLHGALPQALALDVYSGSLAEVLHA
                     N"
BASE COUNT          659 a         1574 c         1750 g          772 t
ORIGIN      
        1 gaactggcaa gcgttgtagt acgtgtggaa tgcattggcg agatcgcgca gccacacggc
       61 aagcaggtgc ggttcgaggt tggccgcggc gctttcgacg atttcggggt agcgcgaaag
      121 ctcggtcagc agtacctgct cgtgctcgtt gtcgagccgc gcgagatggg cgaggccgtt
      181 ggcctggtcg atcgcatggc ccttctcgcc ggcctggcgc agcacgctgc acacccgcgc
      241 gtgggcgtac tggatgtagt acaccgggtt gtcgttggtc tgcgagcggg cgaggtcgat
      301 gtcgaacacc agctgcgaat cggccttgcg cgcaatgagg aagtagcgcg tggcgtcgcg
      361 gccgacctcg tcgatgaggt cacgcagggt gacgtagctg ccggcgcgct tggagatctt
      421 cacctcctcg ccgccgcgca tcacggtcac catctggtac agcaggtaat ccgggtaacc
      481 cggcgggatg ccgcaatcca gcgcctgcag gccggccttc acgcgcgcca gcgagccgtg
      541 gtggtccgag cccagcacgg tgatcgcctt gccgtagccg cgctgccact tggaaaggtg
      601 gtaggcaacg tccggcacga aatacgtata ggtgccgtcg gacttgcgca tcacgcggtc
      661 cttgtcgtcg ccgaacgcgg tggtcttcag ccacagcgcg ccgccttcct cgtaggtgta
      721 gccgtgcgcg gtcagttcgc gcacggtctc ttccaccttg ccgtcggcat acagcgagga
      781 ctcgaggaaa tacacgtcga agccgacgcc gaacgccgcg aggtcgaggt tctgctcatg
      841 ccgcaggtag gccacggcga acgcgcggat cgcgtcgagg ttgtccggat ccttcgcgcc
      901 ggtgacggtc tggccttcga cgctgacgct cgcgccagcc aggtaggcgt ccgccacgtc
      961 ggcgatgtag tcgccgcggt agccgttctc cggccagccc gcgtcgccgg gggcgatgcc
     1021 gcgcgcgcgc gcctgggtgg aggcggcgag gttggcgatc tgcacgccgg cgtcgttgta
     1081 gtagaactcg cgcttcaccg cccagccggt ggcgtccagc aggcgcgccg cgcagtcgcc
     1141 cagcgccgcg ttgcggccgt ggcccacgtg cagcggcccg gtggggttcg cggagacgaa
     1201 ctcgacaccc accgtgcgtc cggcgccggt cgcgttgcgg ccgtagcgct cgccctgttc
     1261 gaggatgcgc cgcaccagcg cctggctggc atcggccgcg aggaagaaat tgatgaagcc
     1321 gggtccggcg atctcgacct tggccacttc ggcgttggcc ggcaaggcgg ccaccagctg
     1381 ttccgccagt tcgcgcggct tggtgcgcgc ggccttggcc agcagcatcg ccacgttggt
     1441 ggtgaagtcg ccgtgctcgc ggctgcgggt gcgctcgatc acgaaggccg gcacgctgag
     1501 gtcggtgggc aacacggctt ggccctgcag ggcgtggatg gcctcgatga tcagttcgtg
     1561 cagctgtgct ttcacgggcg cgacgtatgg gatggaaccg gcaatcctag cagacgtatc
     1621 gccgagcccc gcgcctgcgc ggcgtctggc gggcgccggc ggggtgccgg tgacgattgt
     1681 ggataagtct gtggggaacc cgccggattt tttgccgttg ctgcgcgtgg aactgccttt
     1741 gcatgtgttt cacgcacata acacgttaca gatcatctgg ttatgtgaaa cggttgatgt
     1801 gacgcctccg atcctgcttg caaatggcga tttccgtcat ttgtgcataa gtttcgccgg
     1861 cttggcggcg aaccttgcgg tgtcggctcg ggttccaggc gggggttggc gtcagatcag
     1921 gccacgggca gccatcgaca ccggctcgcc ggcaccgatc acgaggtggt cgagcacgcg
     1981 cacgccgatg gtctgcagcg cgtcgcgcag gtcgcgggtg atggcccggt cggcggcgct
     2041 tggctcggcc acgccggaag ggtggttgtg ggcaaagatc accgcgctgg cgttgtgctc
     2101 caggcacgcg cgcaccacct cgcgcgggtg cacgctggca ccgtccacgg tgccgcgaaa
     2161 caactcctcg aaccccagca cgcggtggcg gttgtcgagg aacaggcagc cgaagacctc
     2221 gtacggcagg tggcgcagcc gcgcccggag ataactgccg ctgtcgcgcg ggttggcgat
     2281 ggccggtgcc tcgcgcagct gctcggcaag gctgcgccgc gccagttcca gcgccgcggc
     2341 aatgcgtgcg cgcttggccg ggccgaggcc gccgatgcgc gccgcctgat cgggtcgtgc
     2401 cagcagcgcc gacaggctgc cggcggcgac gaggatctcc cgcgccagcg cgatcgcatc
     2461 cttgccgcgt acgccgctgc cgagcagcac ggccagcaac tcggcgtcgg aaagggcgtc
     2521 gctgccgcgt tcgagcagct tttcgcgcgg gcgttcgccc tcgggccagt cacggatgct
     2581 catgcccgaa gcgtgccggt tcggcgtgcg cgcggccgcc gtcgaagtgc gtgattccgg
     2641 taagctagcc gcgttgacgt acgtcaggcc gagcctacat gagtcttgct gagcggcgca
     2701 ttctgctggg ggtagcgggc ggcatcgccg cctacaagtc gtgcgaactg gtgcgccgcc
     2761 tgcgcgatgc cggcgccgaa gtgcgcgtgg tgatgaccgc cggcgccgag cactttgtcg
     2821 gtaccgcgac gttccaggcc ttgtccggcc agccggtgcg cacctcgctg tgggatgcct
     2881 cggccgaggc cgcgatgggc cacatcgagc tggcgcgctg ggccgaacgc atcgtcgtcg
     2941 cgccggccag cgccgacgtg atcgcgcgcc tcgcgcaggg gcgggcggac gacctgctcg
     3001 ccacgctgtg cctcgccagt gacgccccgt tgtacttggc gccggcgatg aaccggcaca
     3061 tgtgggcgca cccggcggta caggcgaaca tggccacgct gcgcgcgcgc ggcgtgcacg
     3121 tgctgggccc ggattccggc gcgcaggcgt gcggcgatgt cggcgccggc cgcatggtcg
     3181 agccggaggc gctgcgcgac gcgctggcgg catcgttcgg caccggcgcg ctgggtggcc
     3241 ttgccctcgt cgtcagcgcc ggtccgacgt tcgaggacat cgacccggta cgcttcatcg
     3301 gcaaccgcag ctccggcaag atggggtttg cggtcgccca ggcagcggtc gaggccggcg
     3361 cgcaggtgac cctggtcgcc gggccggtga gcttgtcgac gccagccggg gtcgccaagc
     3421 gggtcaacgt gcgcagcgcg gcgcacatgc agcaggcggt gcacgccgcc tgcgccgacg
     3481 cgcagatcta cgtcggtgcc gccgccgtcg gcgactaccg cccggtggca tgcgcgccgc
     3541 gcaagctgaa gaagcaggcc ggcgccgatc tggtgctgga attggcggaa aacccggaca
     3601 tcctcgccag cctgtcggca atgccggcgc atcccttcct ggtcggcttt gccgccgaaa
     3661 cccacgaggt ggagcgctac gcgcaggaca agctggcgcg caaggggctc gacatgatcg
     3721 ccgccaatcg cgtcggcgac ggactcggct tcgattccgc cgacaacgcg ctcgacgtgt
     3781 tctgggcgga cggccaccgg ccgttgccgc gcgcgagcaa gatcgagctg gcgcgccagc
     3841 tcgtcgcctg catcgccgag cgctaccgcg cggcgcgcgg ctgagcccat gctcgacgtc
     3901 cagctcaaga tcctcgatcc gcgcatgggc gaaagcatcc cgttgccggc gccggccacg
     3961 ccgggcagtg ccggcatgga cctgcgcgct gcactcgaca cgccgctgac gctggccccg
     4021 ggcgaaagcg tgctggtgcc cagcggcatg gcgatccaca tcggcgaccc cggctggtgc
     4081 gcgctggtcg tgccgcgttc ggggctgggg cacaggcacg gggtggtgat gggcaatctg
     4141 gtcggcgtga tcgatgccga ctaccagggg ccgctgatga tctcctgctg gaaccgcggc
     4201 cgcgagccgt acaccatcgg agtgggcgat cgcatcgcgc agctcctgct ggtgccggtg
     4261 gcgcaggcgc ggttgacgcg ggtggacgag ttcgcgccca gtgcgcgcgg cagcggcggg
     4321 tttggttcga ccggcatccg gtgatgccgc gtggcgactg gatggcgcag gtacctgtga
     4381 cgacagggag cgacgatggc tgagacgggc ggatcgaggc ggcgtttgcg ggtggatctc
     4441 cggcgcttgt ggccgcttgc ggccggcacc gcgttcctgc tggtcggtgt tttctgcgcg
     4501 tggcagacct ggctcattgc cgacgaagcc catgccgccg agcgcgtggt gcgcgcgcgc
     4561 gacgtcgtgg tgcaggacct ggcgcgaacc gtggcgcgcc agcgtggcgc ggtggaaagt
     4621 gccgtcgcaa aattgccgcc gaccgcgttg caggccgatc acgcacagct cgtcgccacc
     4681 ctgcacggcg cgttgccgca ggcgctggcg ctcgacgtct acagcggcag cttggccgag
     4741 gtgctgcacg ccaat
//
LOCUS       DASSVL010000487         2898 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_491460, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000487 DASSVL010000000
VERSION     DASSVL010000487.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2898)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2898)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2898
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_491460"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..118)
                     /locus_tag="VFM52_08520"
     CDS             complement(<1..118)
                     /locus_tag="VFM52_08520"
                     /inference="COORDINATES: protein motif:HMM:NF017747.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HutD family protein"
                     /protein_id="HET8765250.1"
                     /translation="MSILHLADCPPRPWKNGLGRTRELAIHPPGAGMDDFLWR"
     gene            complement(115..2211)
                     /gene="dinG"
                     /locus_tag="VFM52_08525"
     CDS             complement(115..2211)
                     /gene="dinG"
                     /locus_tag="VFM52_08525"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008216531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016818 - hydrolase activity, acting on
                     acid anhydrides, in phosphorus-containing anhydrides
                     [Evidence IEA];
                     GO_process: GO:0006139 - nucleobase-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase DinG"
                     /protein_id="HET8765251.1"
                     /translation="MLADSTKDAIRAAYARLKEGLPGFRARPAQTRMIADVANALAAT
                     HGAAAIEAPTGTGKSMAYLIAGHAVARAQKKRLLIATATVALQEQLVERDIPLYLKLS
                     GHTAKVALAKGRGRYLCPRNLAMARQGLDGPTQAGFGFDPELALWQKPPSERDKRALG
                     KLAKAWDAGDWNGDMDAAPEPVGDALRPLLTTSAGGCTNRKCVYFMQCPFFAARRTVE
                     DAEIIVANQDLVLADLTMPADDESWGGVILPRPDETLYIFDEAHHLPAKAIDRGAAEV
                     HLAAALRHLNRLGRQVHAAYSLTDKENLGRLTLDAGDAKLQELSDCLEALEKEIRLGW
                     VPDPGELEPVYRGSLGCLPAAWVDHAQALSLLASEVQRWLTAVRRAVTEMTDGGPTQD
                     ALARELGIGLERVARQAACWQAWAAEDSENAPPLARWVSLNGEQQLTCHASAVSASGL
                     LRHVLWGNASGVVLTSATLSSGGNFRGYADAVGLPNDAATVSLPSPFDLAAQARLEVP
                     ALDVLPAAREEHARAISDWLDAHLDWTAGNLVLFTSRAKLDRVLQCLPLDKVRKVRAQ
                     GTLGKAQLIAEHGADVDAGKGSTLFGLASFGEGLDLPGKLCETVVITQLPFAVPTDPV
                     GATYAEWLESRGRNPFIEVSIPDATRLLTQYCGRLIRTETDHGRVVILDRRIVTKRYG
                     AGMLRALPPFQRVIER"
     gene            2449..>2898
                     /locus_tag="VFM52_08530"
     CDS             2449..>2898
                     /locus_tag="VFM52_08530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8765252.1"
                     /translation="MKATPASVPVAGRADLVAWLTRLVDAWDPADIAALAGELACAQS
                     GCAQARVVWSPFSSAPHDEAAQPLPAALALVRGRLERSGSPSVAFGDALAVRLLSRGR
                     AILLMGLDDPDRHAAVLAAIEPWLPLVTAKLERALRMRDLEATQRQME"
BASE COUNT          369 a          959 c         1105 g          465 t
ORIGIN      
        1 cccgccagag aaaatcgtcc atgccggcgc cgggcggatg gatggccaat tcgcgcgtgc
       61 gccccagccc gtttttccac gggcgcggcg ggcaatcggc gagatgcagg atgctcatcg
      121 ttcgatcacc cgctggaacg gtggcaacgc gcgcagcatg ccggcgccgt agcgcttggt
      181 gacgatgcgg cggtcgagga tgacgacgcg gccgtggtcg gtttcggtgc ggatcagccg
      241 cccgcagtac tgggtgagca ggcgcgtggc gtcggggatg ctgacctcga tgaacgggtt
      301 gcggccgcgc gattccagcc actcggcgta ggtggcgccg accgggtcgg tgggcacggc
      361 gaacggcagc tgggtgatga ccacggtttc gcacagcttg ccgggcaggt ccaggccttc
      421 gccgaagctg gccaggccga acagcgtgct gcccttgccg gcgtcgacgt cggcgccgtg
      481 ctcggcgatc aattgcgcct tgcccagcgt gccttgcgcg cgcaccttgc gcaccttgtc
      541 cagcggcagg cattgcagca cgcggtcgag cttggcgcgc gaggtgaaca gcacgaggtt
      601 gccggcggtc cagtcgaggt gggcgtcgag ccagtcgctg atcgcgcggg cgtgttcctc
      661 gcgcgcggca ggcagcacgt cgagcgccgg cacttcgagc cgggcctggg cggcgaggtc
      721 gaacggcgag ggcaggctga cggtggccgc atcgtttggc aggccgacgg cgtcggcgta
      781 gccgcggaaa ttgccgccgc tgctgagcgt ggccgaggtc agcaccacgc cgctggcgtt
      841 gccccacagc acgtggcgca acagccccga ggccgacacc gccgaggcgt ggcaggtgag
      901 ctgctgttcg ccgttcaggc tgacccagcg cgcgagcggc ggcgcgttct cgctgtcttc
      961 cgccgcccac gcctgccagc acgcggcttg ccgcgcgacg cgttcgagcc cgatgcctag
     1021 ctcgcgcgcc agcgcatcct gggtcgggcc gccatcggtc atctcggtca ccgcgcggcg
     1081 cacggcggtg agccagcgct gcacttcgct ggccaaaagg ctcagcgcct gcgcatggtc
     1141 gacccacgcg gcgggcaggc agccgagcga gccgcggtac accggttcga gctcgccagg
     1201 gtcgggcacc cagccgaggc ggatctcctt ttccagggct tcgaggcagt cactcagctc
     1261 ttgtagcttg gcgtcgccgg cgtccagcgt gagacggccg aggttttcct tgtcggtgag
     1321 cgaataggcc gcgtgcactt gtcggccgag gcggttcagg tgacgcagcg cggcagccag
     1381 gtgaacctct gcggcaccgc ggtcgatcgc cttggccggc aggtggtgcg cctcgtcgaa
     1441 gatgtacagc gtctcgtccg ggcgcggcag gatcacgccg ccccagcttt cgtcgtcggc
     1501 cggcatggtg aggtcggcca gcaccaggtc ctggttggcg acgatgatct cggcgtcctc
     1561 caccgtgcgc cgtgcggcga agaacgggca ttgcatgaaa tacacgcatt tgcggttggt
     1621 gcagccgccg gcgctggtgg tgagcagcgg gcgcagggcg tcgccgaccg gctccggcgc
     1681 ggcgtccatg tcgccgttcc agtcgccggc gtcccatgcc ttggccagct tgccgagcgc
     1741 gcgcttgtcg cgttcgctcg gtggcttctg ccacagcgcc agctcggggt cgaagccgaa
     1801 accggcctgg gtcgggccgt ccagtccctg gcgtgccatc gccaggttgc gcgggcacag
     1861 gtagcggccg cggcccttgg ccagcgcgac tttcgccgtg tggccggaaa gtttcaggta
     1921 cagcgggatg tcgcgctcga ccagctgttc ctgcagtgcc accgtggcgg tggcgatcag
     1981 caggcgcttt ttctgcgcgc gggcgacggc gtgcccggcg atcaggtagg ccatcgactt
     2041 gccggtgccg gtcggcgcct cgatcgccgc ggcgccgtgg gtggccgcca gcgcgttggc
     2101 cacgtcggcg atcatccggg tctgcgccgg gcgcgcgcgg aagccgggca ggccttcctt
     2161 gagccgcgcg taggcggcgc ggatcgcgtc cttggtggag tcggcaagca tgcgggcatt
     2221 ctaccggtag tgggtttccg gcccggtcct tgcatggtgg ttggggatcg aacgcgaatc
     2281 cggcgccagt gggtgcggcc tggccacgcc gcgatgcaga atcgtgaccg gatctcaagc
     2341 ccgttggcag ctggccgatg caggatgaga ccggtgcggc gcaccggaaa cggcgctccg
     2401 catcgcggga gggggtactt caggcgcatg gatctcgggg gaggcagcat gaaggcgaca
     2461 cctgccagcg tgccggttgc gggtcgcgcc gacctggtcg cgtggctgac gcgcctcgtg
     2521 gatgcgtggg atccggccga catcgccgca ctggcgggcg agctggcgtg tgcgcagtcc
     2581 ggctgtgcgc aggcgcgcgt ggtgtggtcg ccgttttcgt cggcgccgca cgacgaggcc
     2641 gcgcaaccgt tgccggccgc gctggcgctg gtgcgcggcc ggctcgaacg cagcggcagc
     2701 ccgtcggtgg cgtttggcga cgcgctcgcc gtgcgtctgc tgtcgcgcgg gcgggcgatc
     2761 ctgctgatgg ggctggacga tcccgaccgg catgcggccg tgctcgcggc gatcgagccg
     2821 tggctgccgc tggtgaccgc gaaactcgag cgcgccttgc gcatgcgtga cctcgaggcc
     2881 acccagcgcc agatggag
//
LOCUS       DASSVL010000488         2437 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_844240, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000488 DASSVL010000000
VERSION     DASSVL010000488.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2437)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2437)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2437
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_844240"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..171
                     /locus_tag="VFM52_08535"
     CDS             <1..171
                     /locus_tag="VFM52_08535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017460815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008839 - 4-hydroxy-tetrahydrodipicolinate
                     reductase [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrodipicolinate reductase C-terminal
                     domain-containing protein"
                     /protein_id="HET8765253.1"
                     /translation="LLIGQGERVELAHRATDRAIFARGALEAAQWLAGQPAGAYGMDD
                     VLAARMGGGARA"
     regulatory      352..484
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00080"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="yybP-ykoY riboswitch is a manganese riboswitch that
                     directly binds Mn; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="manganese"
                     /db_xref="RFAM:RF00080"
     gene            577..1572
                     /locus_tag="VFM52_08540"
     CDS             577..1572
                     /locus_tag="VFM52_08540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008216708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:calcium antiporter"
                     /protein_id="HET8765254.1"
                     /translation="MSAAILFLLSAVAIYVACEYFVNGVEWLGHRLNFGTTATGTVLA
                     AFGTALPESAVTFIAVVFGKTPGARDIGVGAAMGGPLVLATIAYAVVGAALWWNHRRL
                     RRGDHLVRVDHQRLARDQAWFLAIFVVKVGLGLVAFVWKPWLGIAFLAAYAVYVAREV
                     RTEEASNEGGLEPLKLQPQATRPALSRIWLQTGGALVVIAVASRVFVGQLEAIGAAWS
                     LSPHLVALLLSPVATELPETLNALIWVRQGKERLALANISGSMMIQATIPSALAIFAT
                     PWLFDTTLIVSGVLTTVAIIYLWALFRRGRVDARALLPVCLLYVVFAAFVVVRHA"
     gene            complement(1581..2276)
                     /locus_tag="VFM52_08545"
     CDS             complement(1581..2276)
                     /locus_tag="VFM52_08545"
                     /EC_number="1.14.11.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015447688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008198 - ferrous iron binding [Evidence
                     IEA];
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2OG-Fe(II) oxygenase"
                     /protein_id="HET8765255.1"
                     /translation="MSPEALLDPARLERPDTVVQRTPFPFLLAHGQLPAEARHDLERD
                     YPAYASAGFFPFAPADCGPSITALVEQLTAPAFGRLIGAKLGIDGLDRYPTLVSLCRR
                     MNRRHGTIHTDSDSKIATVLLYLTPQWPDTSDGCFRLLSRPDDIDAVIAPEMPPLYGE
                     MAAFKRCDNSYHGHLPYEGERRVIQVAWLVSEDAKQRKTRRGRLARLLKRLTGKLDTR
                     YGAERDRNAAHRD"
BASE COUNT          326 a          800 c          879 g          432 t
ORIGIN      
        1 ctgttgatcg gacagggcga gcgcgtcgag ttggcgcacc gcgcgaccga tcgcgcgatc
       61 ttcgcacgcg gcgcgctcga ggcggcgcag tggcttgccg gccagccggc cggcgcctac
      121 ggcatggacg acgtgctcgc cgcgcgcatg ggcggcggcg cccgcgcctg agccgtttcg
      181 cgtccggccc gcattgcgcc catgccaacg gtgggcggtt cggcgctggc cggtgtcagc
      241 gcggcgcgat tgcgatgggg gcgcgatcgc accggcgatg gtgcgacgcc ctttcccgca
      301 tcactggcga gatcggcttg ccgctgcagc gccagtcccg ctagcattcg tacgttcgtc
      361 attggggagt agccagcctc gctcccgccc ggccgcgtgc cgggcaactc gaggaatccg
      421 cgtcaacaga ctcgaggcca tcgtgcctcg tggtgcggat ggcctgccgc gacgttggca
      481 agcccggcga gacctttggc cacgatgcgc tttgcccggg ccgggcgagc cgtgtcgtcg
      541 cgccaaggtg tcccgctcgc ccggccggaa tcatgcatgt cagcagccat cctgttcctg
      601 ctctccgcag ttgcgatcta cgtcgcctgc gaatacttcg tcaacggcgt cgagtggctg
      661 gggcaccggc tgaacttcgg caccacggca accggtaccg tgctggccgc cttcggcacc
      721 gcgttgccgg aaagtgcggt gaccttcatt gcggtggtgt tcggcaagac gcccggcgcc
      781 cgcgacatcg gtgtcggcgc cgcgatgggc ggcccgctgg tgctggcgac gatcgcctat
      841 gccgtcgtcg gcgcggcact gtggtggaac caccgccggc tgcggcgcgg cgaccacctg
      901 gtgcgggtcg accaccagcg gcttgcgcgc gaccaggcgt ggttcctggc catcttcgtg
      961 gtgaaggtcg ggctggggct ggtcgcgttc gtctggaaac cttggctcgg catcgccttc
     1021 ctggcggcct atgcggtgta cgtggcgcgc gaggtgcgca ccgaagaggc cagcaacgaa
     1081 ggcgggctgg agccgctcaa gctgcagccg caggcgacgc gaccggcgct gtcgcgcatc
     1141 tggctgcaga ccggcggcgc actcgtcgtg atcgcggtgg cctcgcgcgt gttcgtcggc
     1201 cagctcgaag cgatcggtgc ggcgtggtcg ctgtccccgc atctcgtcgc cttgctgctc
     1261 agcccggtag cgaccgaact gccggagacc ctgaacgcgc tgatctgggt gcgccagggc
     1321 aaggaacggc tggcgctggc gaacatttcc ggctcgatga tgatccaggc gacgatcccg
     1381 agcgcgctgg cgatcttcgc gacgccctgg ttgttcgaca ccacgctgat agtgtccggt
     1441 gtgctgacca ccgtggcgat catctacctg tgggccttgt tccgccgtgg gcgtgtcgat
     1501 gcccgcgcgt tgttgccggt gtgcctgctt tacgtggtgt ttgccgcttt cgtggtggtg
     1561 cgccacgcct gaggcggtag tcagtcgcga tgcgcggcgt tgcggtcgcg ctccgcgccg
     1621 taacgggtgt cgagcttgcc ggtcaagcgc ttcagcaggc gcgcaaggcg gccacggcgg
     1681 gtcttgcgct gcttggcgtc ctcgctgacc agccatgcga cctggatgac ccggcgttca
     1741 ccttcgtacg gcagatggcc gtgataggag ttgtcgcagc gcttgaacgc ggccatttcg
     1801 ccgtacagcg gcggcatctc cggcgcgatc accgcatcga tgtcgtccgg gcggctgagc
     1861 aggcggaagc agccgtcgct ggtatccggc cattgcggcg tgaggtagag cagcacggtg
     1921 gcgatcttgg aatcgctgtc ggtatggatc gtgccgtgcc ggcggttcat gcgccggcat
     1981 aggctgacca gcgtggggta acggtcgagc ccgtcgatgc cgagtttcgc gccgatcagt
     2041 cgcccaaacg ccggcgccgt cagctgctcg accagcgcgg tgatcgacgg cccgcaatcg
     2101 gctggcgcga acgggaagaa gccggcgctc gcataggccg ggtagtcgcg ctcgaggtcg
     2161 tggcgtgcct ccgccggcaa ttggccgtgc gcgagcagga acggaaacgg cgtgcgttgc
     2221 accacagtgt ccgggcgttc gaggcgcgcg ggatcgagca gggcttccgg gctcacggcg
     2281 gcgggtcagt ccatcgaggg aagcgcaaag tgtagcgcgc gatcccggta tgcacgctga
     2341 cgcaaacggc cgtctggcgc gctttccggc tggacaggaa agcgccgctt gcctatcatt
     2401 gtgacccgcc ccgatacctc ccttccaaag tttccaa
//
LOCUS       DASSVL010000489         4603 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_307557, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000489 DASSVL010000000
VERSION     DASSVL010000489.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 4603)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4603)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4603
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_307557"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..672
                     /locus_tag="VFM52_08550"
     CDS             <1..672
                     /locus_tag="VFM52_08550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007080583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HET8765256.1"
                     /translation="RPAPLAPAALAVPADLTVGLIAHRADLVAARWRVDAAGHDIKAA
                     KTEFLPNLSLGVLAGVIAVGDHNVFQLPARFYSVAPSLSLPIFDGGRLRANLDAKDAQ
                     YELAVARYNQTLVHAVNEVADDVDALQSLAVQAAAQQRALDAAQAAWQLADQRFKAGI
                     GSWLEALSVRQQLLVAEQRMAQLRAEQADQSVQLVQALGGGWQPTAAAPAAPTLSSSA
                     AAPRS"
     gene            682..1875
                     /locus_tag="VFM52_08555"
     CDS             682..1875
                     /locus_tag="VFM52_08555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007510313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HET8765257.1"
                     /translation="MSTPNPSATANPVPPAPLKKRRSVLLRVLLVVIVLAIIAWALWY
                     WFDGRWYEGTEDAYVGGNVVQITPQIPGTVVSIGADDGDLVKQGDVLVALDRADADVA
                     LAEAKANLAATVRKVRGLYSSVNGEQAVVAAREVAVAKAKADYDRRTGLAKSGAISAE
                     ELSHARDALTAAQSALVTAQQQFQTSKVLVDDTVVASHPDVEAAAAKLRAAWLTDVRT
                     TLVAPVTGYVAKRSVQVGQRVQPGAPLMAVVPLHQVWIDANFKETQLTHMRIGQPVAI
                     TSDVYGDATKYQGKVASLGIGTGSAFSLLPAQNATGNWIKIVQRIPVRVVFTDPRQLD
                     AHPLRIGMSLDVDVNLHDRNGPMLAQQPPTEPVFSTDVFARQAAQADALIARIIHANM
                     AGRAK"
     gene            2009..3538
                     /locus_tag="VFM52_08560"
     CDS             2009..3538
                     /locus_tag="VFM52_08560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007808509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0006855 - xenobiotic transmembrane
                     transport [Evidence IEA];
                     GO_process: GO:0009410 - response to xenobiotic stimulus
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DHA2 family efflux MFS transporter permease
                     subunit"
                     /protein_id="HET8765258.1"
                     /translation="MSTYFRPPNLALTTFGLSLATFMQVLDTTIANVSLPTIAGNLGV
                     SNDQSTWVITSFAVSMAISLPLTGFLTRRFGEVKLFVWCTLLFSFTSFMCGISQSMEM
                     LLLFRALQGAVAGPMYPITQSLMIGTYPPHHRGMALAILSMVTVVAPIAGPILGGWIT
                     DNYSWPWIFFINVPIGIFASTVVAAQLREKVEQLDRPRMDYVGLITLIVGVGALQIVL
                     DKGNDEDWFNSNFIVIASILSAIAIAVFLIWELTDDDPIVDLKLFRHRNFTTGTVAMV
                     LGYAAFFAIALLIPLWLQQNLGYTATWAGFATAPLGIIPILLTFFVGKYAARMDLRLL
                     AAASFLVMGVTCFWRADFFLQIDFYNVAMVQLLQGLGVALFFMPTLTILLSDLESNEI
                     ASGSGVATFVRTMAGSFAASITTLMWTRRAVSHHEQLTEHITPYDPIAQAGLQHLGNG
                     HPQRGAMIVNDMITQQGFQMSFNDIMWALGWIFIALMLVIWLAKPPFVPKARPAAGGG
                     H"
     gene            complement(3650..4546)
                     /locus_tag="VFM52_08565"
     CDS             complement(3650..4546)
                     /locus_tag="VFM52_08565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015448965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UbiA family prenyltransferase"
                     /protein_id="HET8765259.1"
                     /translation="MKTFLALSRSSHGVLDLAMTGFAALLWLGHFPAWPVLAVAIVTA
                     AAGYTALYALNDLIGVKVDREKFADGGPKPGYAVEASALRYPIAQGKLSLGKGIAWFT
                     LWYLVALAGSWWLNPFLVAVVLAAPVLETAYCLLLKVTWWRTLVSGLVKSLGPVAAVL
                     VVVPRPDPAWLALMVAWLVAWEIGGQNIPADWNDVEEDRRIGARTIPVVFGPRAAGSI
                     VLVALVACVALSLCLPAMSPLALGLPYLAASLAIGLYLLLWPALRLKLDRDGRNAARL
                     FDRASLYPVAQLALILVFVLSR"
BASE COUNT          727 a         1708 c         1502 g          666 t
ORIGIN      
        1 cgcccggcgc cgctggcgcc ggcggcgctc gcggtgccgg ccgacctcac ggtggggctg
       61 atcgcgcatc gcgccgacct cgtcgcggcg cgctggcggg tggatgcggc cggccacgac
      121 atcaaggccg ccaagaccga gttcctgccc aacctgagcc tcggtgtgct cgccggcgtg
      181 atcgcggtcg gcgaccacaa cgtgttccag ctgccggcgc ggttctacag cgtggcgccg
      241 tcgctgtcgc tgccgatctt cgacggcggc cgcctgcgcg ccaacctcga cgccaaggat
      301 gcgcagtacg agctggccgt ggcgcgatac aaccagaccc tggtgcacgc ggtgaacgag
      361 gtggccgacg acgtcgacgc gctgcagtcg ctcgccgtgc aggccgccgc gcagcagcgc
      421 gcgctcgacg ccgcgcaggc cgcctggcag ctcgccgacc agcgcttcaa ggccggcatc
      481 ggcagctggc tcgaagcgct cagcgtgcgc cagcaactgc tggtggccga gcagcgcatg
      541 gcgcagctcc gggccgagca agccgaccag tcggtgcaac tggtccaggc gctgggcggc
      601 ggctggcagc ccaccgccgc cgcgcccgcc gcgcccaccc tttcctcctc cgccgccgct
      661 ccccgctcct gaaggcaccc catgtccact cccaatcctt ccgcgaccgc gaaccccgtc
      721 ccgccggcgc cactgaaaaa gcgccgcagc gtgctgctgc gcgtgctgct cgtcgtcatc
      781 gtgctggcca tcatcgcctg ggcgctgtgg tactggttcg acggccgctg gtacgaaggc
      841 accgaagacg cctacgtcgg cggcaacgtg gtgcagatca cgccgcagat tcccggcacc
      901 gtggtttcca tcggcgccga cgacggcgac ctggtgaagc agggcgacgt gctggtcgcg
      961 ctcgaccgcg ccgacgccga cgtcgcgctg gccgaggcca aggccaacct cgccgccacg
     1021 gtgcgcaagg tgcgcggcct gtactccagc gtgaacggtg agcaggccgt cgtcgccgcg
     1081 cgcgaagtcg cggtggccaa ggccaaggcc gactacgacc gccgcaccgg gttggcgaaa
     1141 tccggcgcga tctccgccga ggagctgtcg cacgcgcgcg acgcgctgac cgccgcgcag
     1201 agcgcgctgg tcaccgccca gcagcagttc cagaccagca aggtgctggt cgacgacacc
     1261 gtggtggcct cgcacccgga cgtcgaggcc gctgccgcga agctgcgcgc cgcgtggctg
     1321 accgacgtgc gcaccacgct ggtggcgccg gtcaccggct acgtcgccaa gcgcagcgtg
     1381 caggtcggcc agcgcgtgca gccaggcgcg ccgctgatgg cggtggtgcc gctgcaccag
     1441 gtgtggatcg acgccaactt caaggagacc cagctgaccc acatgcgcat cgggcagccg
     1501 gtggcgatca cctcggacgt ctacggcgac gcgacgaagt accagggcaa ggtcgcgagc
     1561 ctcggcatcg gcaccggcag tgcgttctcg ctgctgccgg cgcagaacgc caccggcaac
     1621 tggatcaaga tcgtgcagcg catcccggtg cgcgtggtgt tcaccgaccc caggcagctc
     1681 gacgcgcacc cgctgcgcat cggcatgtcg ctcgacgtgg acgtcaacct gcacgaccgc
     1741 aacggcccga tgctggccca gcagccgccg accgagccgg tgttcagcac cgacgtgttc
     1801 gccaggcagg ccgcgcaggc cgacgcgctg atcgccagga tcatccacgc caacatggcc
     1861 ggccgcgcca agtgacgcgc cacgccggcg ggccgggctt cggcccgacg gcaacccgca
     1921 cggatcgtcg ggctgatgcc cgacccacgg caaacgttcc ccgccacgcg gcagggctcc
     1981 tcgccacctc ccccatccac acggttcgat gagcacctac ttccgcccac ccaacctcgc
     2041 gctgaccacg ttcgggcttt cgctcgcgac gttcatgcag gtgctggaca ccacgatcgc
     2101 caacgtgtcg ctgccgacca tcgccggcaa cctcggcgtg agcaacgacc agtcgacctg
     2161 ggtgatcacc tcgttcgcgg tgagcatggc gatctcgctg ccgctgaccg gtttcctcac
     2221 ccgccgcttc ggcgaggtga agctgttcgt gtggtgcacg ctgttgttct cgttcacctc
     2281 gttcatgtgc ggcatttcgc aaagcatgga aatgctgctg ctgttccgcg cgctgcaggg
     2341 cgcggtcgcc gggccgatgt acccgatcac gcagagcctg atgatcggca cctatccgcc
     2401 gcatcatcgc ggcatggcgc tggcgatcct gtcgatggtg accgtggtcg cgccgatcgc
     2461 cggtccgatc ctcggcggct ggatcaccga caactactcg tggccgtgga tcttcttcat
     2521 caacgtgccg atcggcatct tcgccagcac ggtggtcgcc gcgcagttgc gcgagaaggt
     2581 cgagcaactc gatcgcccgc gcatggacta cgtcggcctc atcaccctga tcgtcggcgt
     2641 cggcgcgctg cagatcgtgc tcgacaaggg caacgacgag gactggttca actccaactt
     2701 catcgtcatc gccagcatcc tttccgccat cgccatcgcg gtgttcctga tctgggagct
     2761 gaccgacgac gaccccatcg tcgacctcaa gctgttccgc caccgcaact tcaccaccgg
     2821 caccgtggcg atggtgctcg gctacgcggc gttcttcgcc atcgcgctgc tgatcccgct
     2881 gtggctgcag caaaacctcg gctacaccgc gacctgggcc ggcttcgcca ccgccccgct
     2941 cggcatcatc ccgatcctcc tgaccttctt cgtcggcaag tacgcggcgc gcatggacct
     3001 gcgcctgctc gccgcggcct cgttcctggt gatgggcgtc acctgcttct ggcgcgcgga
     3061 tttcttcctg cagatcgact tctacaacgt ggcgatggtg cagctgctgc agggtctcgg
     3121 cgtggcgctg ttcttcatgc ccacgctcac catcctgctc tccgacctcg agtccaacga
     3181 gatcgcgtcg ggctccggcg tggccacctt cgtgcgcacc atggccggca gcttcgccgc
     3241 gtccatcacc acgctcatgt ggacgcgccg cgcggtgtcc caccacgagc agctcaccga
     3301 gcacatcacg ccctacgacc cgatcgcgca agccggcctg cagcatctcg gcaacggcca
     3361 tccgcaacgc ggcgcgatga tcgtcaacga catgatcacc cagcagggtt tccagatgtc
     3421 gttcaacgac atcatgtggg cgctgggctg gatcttcatc gcgctgatgc tggtgatctg
     3481 gctcgccaag ccgccgttcg tgccaaaggc gcgaccggcg gccggcggcg ggcactgagg
     3541 ccaggtccgc cggcccgggt ccggcgccgg cgagctgccc gggcggcgac ggccaccagc
     3601 aacaccactg gcccgccgct acgccgcacc gccgccacca cgaggcaact cagcgcgaca
     3661 gcacgaacac caggatcagc gccagctgcg ccaccggata caggctggcg cggtcgaaca
     3721 ggcgggccgc gttgcggcca tcacggtcaa gcttgagccg gagtgcgggc cacagcagca
     3781 ggtacaggcc gatggcgagg ctggcggcga gatacggcag gccgagcgcc agcggcgaca
     3841 tcgccggcag gcacaggctg agcgcgacgc aggcaacgag cgccaccagc acgatgctgc
     3901 cggccgcacg cggtccgaac accaccggaa tggtgcgcgc gccgatgcgg cgatcctcct
     3961 ccacgtcgtt ccagtcggcg gggatgttct gcccgccgat ctcccaggcc acgagccagg
     4021 ccaccatcag cgccagccac gcagggtcgg gccgcggcac caccaccagc acggcggcga
     4081 ccgggcccag cgacttcacc agtccgctca ccagggtgcg ccaccaggtg accttgagca
     4141 gcaggcagta ggcggtctcc agcaccggcg cggccagcac caccgccacg aggaacgggt
     4201 tcagccacca cgagccggcg agcgccacga ggtaccacag cgtgaaccac gcgatgccct
     4261 tgcccaggct gagcttgccc tgcgcgatcg ggtagcgcag cgcggaagcc tccaccgcgt
     4321 aacccggctt ggggccgccg tcggcgaact tctcgcgatc caccttgacc ccgatgagat
     4381 cgttcagcgc gtacagcgcg gtgtagccgg cggcggcggt gacgatggcg acggccagca
     4441 ccggccaggc cgggaagtgt cccagccaga gcagcgcggc gaagccggtc atcgcgaggt
     4501 cgagcacgcc atggctggag cgcgacaggg caaggaaggt tttcatcgac tcagccccgc
     4561 cggacgaagc tggccatgta gttgacgtcc tcgcgtcccg gcg
//
LOCUS       DASSVL010000490         3811 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_449165, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000490 DASSVL010000000
VERSION     DASSVL010000490.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3811)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3811)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3811
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_449165"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1513)
                     /gene="glmS"
                     /locus_tag="VFM52_08570"
     CDS             complement(<1..1513)
                     /gene="glmS"
                     /locus_tag="VFM52_08570"
                     /EC_number="2.6.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015446783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004360 - glutamine-fructose-6-phosphate
                     transaminase (isomerizing) activity [Evidence IEA];
                     GO_process: GO:0006040 - amino sugar metabolic process
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--fructose-6-phosphate transaminase
                     (isomerizing)"
                     /protein_id="HET8765260.1"
                     /translation="MCGIVAAVAQRDVAPLLIAGLKALEYRGYDSAGLAVLEGGEIRR
                     VRAKGKVREMEAKYLAAPFPGGTGIAHTRWATHGVPNEANAHPHIAGRIAIVHNGIIE
                     NYAALRETLKAHGHVFTSETDTEVIAALIEERAAAGRNLREAVLDVVRGLEGAYAIAV
                     ISRDEPGKVVGARRGAPLLVGVGIGEHFLGSDAQALIQVTNRMIYLDEGDVVEITRDG
                     AEIFGLDGQPVTRTVHESELSTDAVERGEYRHYMQKEIFEQPRAVADTLESRLGAHGV
                     LPNIFGVGGDELLAKVRGVHIIACGTSYHAGLVAKYWIEEHAHLPVAVEVASEYRYRE
                     AVVPDGTLFVAISQSGETADTLAAMRESRRRGYLGTLAICNVPESSVVREADLKLMTR
                     AGPEIGVASTKAFTTQLAALALLTLRLASQRGLPAERQLQLCAQLQGLPRAIERALQL
                     EPRIVELAERFIPRHHALFLGRGAQYPVALEGSLKLKEISYIHAEAYPAGELKH"
     gene            complement(1630..3000)
                     /locus_tag="VFM52_08575"
     CDS             complement(1630..3000)
                     /locus_tag="VFM52_08575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007807546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal-phosphate dependent enzyme"
                     /protein_id="HET8765261.1"
                     /translation="MTVHHSVLELIGHTPMLRTQRLDAGPCELFLKLENMNPGGSIKD
                     RIGVSMIEGAEKAGKIKPGATLVEGTAGNTGLGLALVAQAKGYKLILVVPDKMSREKI
                     FNLKAMGAEVVLTRSDVAKGHPEYYQDMAARIAKETPGAYFINQFGNPDNPRAHIETT
                     GPEILEQMDGRVDAIVVGCGSSGTMTGLSQFFAKASPATEIVLADPIGSVLAQYINEG
                     RLTQKSASWMVEGIGEDFLPTISDFSRVKKAYAISDKESFLTARELLAKEGVLGGSST
                     GTLLAAALRWCREQTAPKRVVTLVCDTGNKYLSKLYNDYWMLDNGFLDREPHGDLRDL
                     VLRPFAKRDTVVVGPHELLITAYNRMKLYDVSQLPVVDGDKLVGIVDESDVLMHVHAD
                     QSRFRDAVEVAMIRDVQKLDVHASVESLLPVFERGHVAVVMDGNAFLGLITRIDLLNW
                     LRRKVD"
     gene            complement(3137..3358)
                     /locus_tag="VFM52_08580"
     CDS             complement(3137..3358)
                     /locus_tag="VFM52_08580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007081045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcH family protein"
                     /protein_id="HET8765262.1"
                     /translation="MFESQHDDVEALMKKDAEFRRLYQHHRELDSKVHDAEIGVLPLD
                     EGTLASMKREKLQAKARLERMWEGRRQFG"
BASE COUNT          568 a         1302 c         1284 g          657 t
ORIGIN      
        1 cgtgcttgag ctcaccggcc gggtaggcct cggcatggat gtaggagatt tccttgagct
       61 tgagcgagcc ctcgagcgcg accggatact gcgcgccgcg gccgaggaac agcgcgtggt
      121 ggcgcgggat gaagcgctcg gccagctcga cgatgcgcgg ctccagttgc aaggcccgct
      181 cgatcgcgcg cggcaggccc tgcaattggg cgcacagctg cagctggcgc tcggccggca
      241 agcccctctg gctcgccagg cgcagcgtga gcagcgcgag cgcggcgagc tgggtggtga
      301 aggccttggt cgaggcgacg ccgatctcgg ggccggcgcg ggtcatgagt ttcaggtccg
      361 cctcgcgcac caccgaggac tccggcacgt tgcagatcgc cagcgtgccg aggtagccgc
      421 gccgccgtga ctcgcgcatt gcggccagcg tgtcggcggt ttcgcccgac tgcgagatgg
      481 cgacgaacag cgtgccgtcc ggcaccaccg cctcgcggta gcggtattcg ctggcaacct
      541 ccaccgccac cggcaggtgg gcgtgctcct cgatccagta cttcgcgacg aggccggcgt
      601 gatagctggt gccgcaggcg atgatgtgca cgccgcgcac cttggccagc agctcgtcgc
      661 cgccgacgcc gaagatgttc ggcagcacgc cgtgcgcgcc gagccgcgat tccagcgtgt
      721 cggccaccgc gcgcggctgc tcgaagattt ccttctgcat gtaatggcgg tactcgccgc
      781 gctcgaccgc gtcggtggac agctcgctct cgtgcacggt gcgcgtgacc ggctggccgt
      841 cgaggccgaa gatctcggcg ccgtcgcggg tgatctcgac gacgtcgccc tcgtcgagat
      901 agatcatccg gttggtcacc tggatcagcg cctgcgcgtc cgagccgagg aagtgctcgc
      961 cgatgccgac gccgaccagg agcggcgcgc cgcgccgcgc gccgacgacc ttgcccggct
     1021 cgtcgcggct gatgacggcg atcgcatacg cgccttcgag cccgcgcacc acgtccagca
     1081 ccgcctcgcg caggttgcgg cctgcggcgg cgcgctcctc gatcaacgcg gcgatgacct
     1141 cggtgtcggt ttccgaggtg aacacgtggc catgcgcctt gagcgtctcg cgcaacgcgg
     1201 cgtagttctc gatgatgccg ttgtgcacga tcgcgatgcg cccggcgatg tgcgggtgcg
     1261 cgttggcctc gttcggcacg ccgtgcgtgg cccagcgcgt atgcgcgatg ccggtaccgc
     1321 cggggaacgg cgcggcgagg tacttcgcct ccatctcgcg caccttgccc ttggcgcgca
     1381 cgcggcggat ctcgccgcct tcgagcacgg cgaggccggc cgaatcgtag ccgcggtatt
     1441 ccagcgcctt gagcccggcg atgagcagcg gcgccacgtc acgctgcgcg acggcagcca
     1501 cgattccgca catgatggaa ctcccgaaaa gacagtgggc gatgacactc ctcgatgccg
     1561 cccggtggtt gccgtctgcc gggcggtcgt cgtgccggca atgtgccggc cacgcgtttc
     1621 aatcggcttt cagtcgacct tgcggcgcaa ccagttcaac aggtcgatgc gggtgatgag
     1681 gccaaggaaa gcgttgccgt ccatcaccac ggccacatgg ccgcgctcga acaccggcag
     1741 cagcgactcg accgaggcgt gcacgtcgag cttctgcacg tcgcggatca tcgccacctc
     1801 gaccgcgtcg cggaagcggg actggtcggc atgcacgtgc atcagcacgt cggactcgtc
     1861 gacgatgccg acaagcttgt cgccgtccac caccggcaac tgcgagacgt cgtagagctt
     1921 catgcggttg taggcggtga tcagcagctc gtgcgggccg accaccacgg tgtcgcgctt
     1981 ggcgaacggg cgcagcacga ggtcgcgcag gtcgccgtgc ggttcgcggt cgaggaagcc
     2041 gttgtccagc atccagtagt cgttgtagag cttggacagg tacttgttgc cggtgtcgca
     2101 caccagggtt accacgcgct tcggtgccgt ctgctcgcgg caccagcgca gcgcggcggc
     2161 cagcagcgtg ccggtggagg aaccgccgag cacgccctcc ttcgccagca gctcgcgcgc
     2221 ggtgagaaag ctttccttgt cgctgatcgc gtaggccttc ttcactcgcg agaagtcgct
     2281 gatcgtcggc aggaaatcct cgccgatgcc ctcgaccatc cagctcgcgc tcttctgggt
     2341 gagccggcct tcgttgatgt actgcgccag caccgagccg atcgggtcgg ccagcacgat
     2401 ctcggtcgcc ggcgacgcct tggcgaagaa ctgcgagagc ccggtcatcg tgcccgacga
     2461 gccgcagccg accacgatcg cgtcgacccg gccgtccatc tgctcgagga tttccgggcc
     2521 ggtggtctcg atgtgcgcgc gcgggttgtc cgggttgccg aactggttga tgaagtacgc
     2581 cccgggggtt tccttggcga tgcgcgcggc catgtcctgg tagtactcgg ggtggccctt
     2641 ggcgacgtcc gagcgggtca gcaccacctc ggcgcccatc gccttcaagt tgaagatctt
     2701 ctcgcggctc atcttgtcgg gcaccacgag gatcagcttg tagcccttgg cctgcgccac
     2761 cagcgccagg cccaggccgg tgttgccggc ggtgccctcg accagcgtcg cgccgggctt
     2821 gatcttgccg gccttctcgg cgccttcgat catcgagacg ccgatgcggt ccttgatcga
     2881 gccaccgggg ttcatgtttt ccagcttcag gaacagctcg cacgggccgg cgtcgagccg
     2941 ctgggttcgc agcatcgggg tatgcccgat gagttcgaga acgctgtggt gcaccgtcat
     3001 gatggctccc ttggcccgcg tgccgaaaag gcgttcatga taaccgagcg ttatatggcc
     3061 gccgagacat tgcggccccg gccatcttcc ggaacggaag atgccgaggc cgtcaaggac
     3121 cgcggggacg gggtgctcag ccgaactggc ggcgcccttc ccacatgcgt tccagccttg
     3181 ccttcgcctg cagtttttcg cgcttcatgc tggcgagcgt gccttcgtcc agcggcaaca
     3241 cgccgatctc ggcgtcgtgc accttgctgt cgagctcgcg gtggtgctgg tacaggcgcc
     3301 ggaactcggc gtccttcttc atcaatgctt ccacgtcgtc atgctggctt tcgaacatga
     3361 tccaacctcc tcgtgagtga gcatgggggc gcgacggcgc ccgatccgcc gacgcttcac
     3421 gcgcaccacc acgcgcccgt gccggcgaac cggcaacgag cgagcgtgac aagcagggat
     3481 gcgacatgag gcgaaccggc agtcatggag caatgcgctc catcggctct gaccgtacac
     3541 cgccccgaga ggggccgcaa gcaatggctg aacgatgctg tggcatcgtt caatcgccgt
     3601 aaaaacaccg taaaaacagc ggtttgtacc agcacgaaac gtgccggtac acgatcggcc
     3661 cggcccggat cagggcttgc cgccgtcccc ctgttccatc tgcgcgcgca tcgccttcgc
     3721 ggccttggcc gccagctccg cctgcgtccg cgcggagcgt gcaacccggc tctgggcctc
     3781 ggccaggcgc ttggccttcg cggcctcggc c
//
LOCUS       DASSVL010000491         2773 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_590382, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000491 DASSVL010000000
VERSION     DASSVL010000491.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2773)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2773)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2773
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_590382"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1976
                     /gene="purL"
                     /locus_tag="VFM52_08585"
                     /gene_synonym="purI"
     CDS             <1..1976
                     /gene="purL"
                     /locus_tag="VFM52_08585"
                     /gene_synonym="purI"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007507246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004642 -
                     phosphoribosylformylglycinamidine synthase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase"
                     /protein_id="HET8765263.1"
                     /translation="LMRVLRLPTVGSKSFLITIGDRTVGGLNHRDPMVGPWQVPVADC
                     AVTLNDFAGYRGEAMALAERAPVAVLSGPDAARLAVGEALTNLAAAPVADLSEVRLSA
                     NWMAAVNHAGEGAALFDAVRAVGMELCPALDISIPVGKDSLSMQAVWQDGGQTQRTVS
                     PVSLVVTAFARVDDARRTLTPQLRLDRGESDLWLIDLGAGRDRLGASALTQVFNRGGG
                     VPPNLEDAAQLKALFALVQEANRAGLVMAYHDRSDGGLIVTLLEMAFAGHCGLEIRLD
                     GWGEAALRALFNEELGAVLQVAATHRDAFAALVAKHGLDAVAHRIGRPKEKLGIKLFV
                     GGEVLSKWHWSTLYAAWNDTTHAMQQLRDNPASADAELAWRLDDADPGLSPRLSFDPA
                     ANVAAPYIAAGARPRVAILREQGVNGQVEMAAAFTRAGFDAVDVHMTDLASGRLKLAD
                     FRGFAACGGFSYGDVLGTGRGWAASILYNDMLRAQFTAFFADASKFALGVCNGCQMLS
                     QLKDIIPGAGHWPRFLRNTSEQYESRVATLEILDSPSLFFQGMAGSRIPVAVAHGEGR
                     AFFAGDANPAKAQPAVRFVDNHGKPTESFPLNPNGSPGGVAGFTAADGRVTILMPHPE
                     RVFRTVQMSWAPDGWGEESPWLRMFRNARVWCG"
     gene            1934..2731
                     /locus_tag="VFM52_08590"
     CDS             1934..2731
                     /locus_tag="VFM52_08590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008435959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8765264.1"
                     /translation="MAAHVPQRPGVVRLSADHPQRRWPPWLPALCWLLLLATLPWWLG
                     LPLLLVCVAALLWRPAAWPLTQPVWRRALRWGLPGMLLAVLRAAGVDALGWLTTLLAA
                     LAGFSLLVLLENWLDRARSRAAAQAASTAASTAEWPQLALAPVAPPATIIELDPVVWH
                     ELRDGALTDPLGGTLAWQGDALQLPDGGSVAGVEPRCAHAADGRWLALPLARQRGVLL
                     IDRQRGRRHRLRGWQLAGWHTGRPWLARDEEHAPLDIAHVLGRDADD"
BASE COUNT          344 a          963 c         1037 g          429 t
ORIGIN      
        1 cgctgatgcg cgtgctgcgc ctgccgaccg tgggcagcaa gagcttcctg atcaccatcg
       61 gcgatcgcac cgtcggcggc ctcaaccatc gcgatccgat ggtcggaccc tggcaggtgc
      121 cggtggccga ttgcgcggtg accctgaacg atttcgccgg ctatcgcggc gaggcgatgg
      181 cgctggccga gcgcgcgccg gtggcggtgc tgtccggccc ggacgcggcg cggctggcgg
      241 tgggcgaggc gctcaccaac ctcgcggcgg cgccggtcgc cgacctgtcc gaagtgcgcc
      301 tgtcggcgaa ctggatggcc gcggtgaacc atgccggcga aggcgccgcg ctgttcgacg
      361 cggtgcgcgc ggtgggcatg gagctgtgcc ccgcgctgga tatttccatc ccggtcggca
      421 aggactcgct gtcgatgcag gcggtgtggc aggacggcgg ccagacccag cgcacggtgt
      481 cgccggtgtc gctggtggtc accgcgtttg cgcgagtgga cgacgcgcgc cgtacgctga
      541 ccccgcagtt gcgcctcgac cgcggcgaaa gcgacctgtg gctcatcgat ctcggcgccg
      601 gtcgcgatcg cctcggcgcc tcggcgctga cccaggtgtt caatcgcggt ggcggcgtgc
      661 cgcccaacct cgaagatgca gcgcagctca aggcgctgtt cgcgctggtg caggaagcca
      721 atcgcgccgg cctcgtcatg gcctatcacg accgctccga cggcggcctc atcgtcacct
      781 tgctggagat ggcgttcgcc ggccactgcg gcctcgagat ccgtctggac ggttggggcg
      841 aggcggcgct gcgcgcgctg ttcaacgagg agctcggcgc cgtgctgcag gtcgccgcca
      901 cgcaccgcga cgcgttcgcc gcgctggtcg ccaagcatgg gctcgacgcc gttgcgcacc
      961 gcatcggccg gccgaaggag aaactcggca tcaagctgtt cgtcggcggc gaagtgctga
     1021 gcaagtggca ctggagcacg ctgtacgcgg cgtggaacga caccacccac gcgatgcagc
     1081 agctgcgcga caacccggcc agcgcggacg ccgagctcgc atggcggctg gacgacgccg
     1141 accccggcct gtcgccgcgc ctgagcttcg acccggcggc caacgtggcc gcgccgtaca
     1201 tcgccgccgg cgcgcgcccg cgcgtggcga tcctgcgcga gcagggcgtc aatggccagg
     1261 tggaaatggc cgcggcgttc acccgcgccg gcttcgacgc ggtcgacgtg cacatgaccg
     1321 atcttgccag cggacgcctg aaactggccg atttccgcgg cttcgcggcg tgtggcgggt
     1381 tctcctacgg cgacgtgctc ggcaccgggc gcggctgggc cgcgtcgatc ctgtacaacg
     1441 acatgctgcg cgcgcagttc accgcgttct ttgccgacgc gtcgaagttc gcgctcggcg
     1501 tgtgcaatgg ttgccagatg ctctcgcagc tcaaggacat catccccggc gccgggcact
     1561 ggccgcgctt cctgcgcaat acctccgagc agtacgaatc gcgcgtggcc acgctggaaa
     1621 tcctcgattc gccgagcctg tttttccagg gcatggccgg ctcgcgcatc ccggtcgcgg
     1681 tggcgcacgg cgaggggcgc gcgttctttg ccggcgacgc caatccggcg aaggcgcagc
     1741 cggcggtgcg cttcgtcgac aaccacggca agccgaccga aagctttccg ctcaacccga
     1801 acggctcgcc cggcggcgtg gccgggttca ccgcggcgga tggccgggtg acgatcctga
     1861 tgccgcaccc ggagcgcgtg ttccgcaccg tgcagatgag ctgggcaccg gacggctggg
     1921 gcgaggaatc gccatggctg cgcatgttcc gcaacgcccg ggtgtggtgc ggctgagcgc
     1981 cgaccacccg cagcgacgct ggccgccctg gctgccggcg ctgtgctggc tgttgctgct
     2041 ggcgacgctg ccgtggtggc tgggcctgcc gttgctgctg gtgtgcgtcg ccgccttgtt
     2101 gtggcgcccg gcggcgtggc cgctgacgca gccggtatgg cggcgggcgc tgcgctgggg
     2161 gctgcccggc atgctgctcg cggtgctgcg tgcggccggc gtcgatgcgc tcggctggct
     2221 gaccaccctg ctggctgcgc tcgccgggtt ctcgctgctg gtgctgctgg aaaactggct
     2281 ggatcgcgcg cgctcacgcg ccgcggcgca ggcggcgagc acggcggcga gcacggcgga
     2341 atggccgcaa ctggcgctgg cgccggtggc gccgccggcc accatcatcg agctcgatcc
     2401 cgtggtgtgg cacgagctgc gcgacggtgc gctgaccgat ccgctcgggg gcacgctggc
     2461 gtggcagggc gatgcgctgc agctgccgga tggtggcagc gtcgccggcg tcgagccgcg
     2521 ttgcgcgcat gccgccgatg gtcgctggct tgccctgccg ctggcgcggc agcgcggcgt
     2581 gctgctgatc gatcgccagc gtgggcggcg ccatcgcctg cgcggctggc agctcgccgg
     2641 ctggcacacc gggcggccgt ggctggcgcg cgacgaggag catgcgccgc tggacatcgc
     2701 tcacgtactc gggcgcgacg cggacgattg acccgccggg acggcgcccg gccttcatac
     2761 tgcatatcgt gaa
//
LOCUS       DASSVL010000492         2932 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_25202, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000492 DASSVL010000000
VERSION     DASSVL010000492.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2932)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2932)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2932
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_25202"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(152..2320)
                     /locus_tag="VFM52_08595"
     CDS             complement(152..2320)
                     /locus_tag="VFM52_08595"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HET8765265.1"
                     /translation="MNVILLVVAIVAALTGIVLAVVSLRRQQRITRELQVSRERYRLV
                     AEGANDGIWDFDLATRRIYFSPRVREMLGYDETELSGPDDIRRIVLPEDYDTARAALY
                     EHLEQGRRDELRRVMRMRTRDGRVLTILARSVAQYAADGTPVRVAGSYTDITEQIGNE
                     RQLQIAASVFESGSDGIVISDAHDRILSVNRAFLGMTGYTQEELTGHLLRDVQVDSDA
                     VRAREQALRDGGSWSGEVAWRLHNGETKTLETSTEAVRDASGEVIFRIHVCIDTAELR
                     YAQARIRHLAYFDSLTGLPNRTHLRGQFEQALATARYAGQPIAVVFFDLDNFKEINDT
                     AGHSVGDDVICAAAQRLGQHMREDDILCRFGGDEFLLLMPNIDAAAAEVLTGQLMEQL
                     CKPVEVEGRLLDIAASAGFSMFPDDAQDAENLVRQADTALFRAKEEGGNAVLRFQPWM
                     GEAVSWRHDMQAALRVAIVRSQFTLRFQPIVDMRTQRLAGVEALLYWNRPGMGVVGPS
                     TFISLAEESRLIEPIGAWVVNEVCRQVATWKRENLPPFYVAINVSGLQLRVAGKFQQH
                     LTGAMKKHGVVNDDLVLEITERHLVQDVKGGLPVLESLTASGIRVSVDDFGTGYSNLE
                     SLKNLTVHQIKIDRTFVRNLMTEVGDRAIVRSIIALGRSLGLQVVAEGVESHEQQQLL
                     REFGCDLLQGYLYARPLPAVDVRPFVEALASREIDVQAGG"
     gene            complement(2414..>2932)
                     /locus_tag="VFM52_08600"
     CDS             complement(2414..>2932)
                     /locus_tag="VFM52_08600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019464084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016765 - transferase activity,
                     transferring alkyl or aryl (other than methyl) groups
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UbiA family prenyltransferase"
                     /protein_id="HET8765266.1"
                     /translation="PQNIVIGGLAGAIPPLLGWAAVTGMQAPSDWAYGLLLVLIVFAW
                     TPPHFWSLAIFRREDYRRACIPMLPVVYGVEYTRWHVLFYTILLVLVSLLPYLTGMSG
                     LLYLGGAAVLGIAYLYYAIRLMNPPDERFAMSAFGYSIVYLIALFGFLLADHWLAAPV
                     IHVGGYVLERIG"
BASE COUNT          520 a         1041 c          914 g          457 t
ORIGIN      
        1 cggcgaacac cacgaccacg gtcgccgaag gttcccacgg aatccaccag cgcaagaaat
       61 ccagcaacgc gttcaagaca tcacctgcgg cacaccaggg cttgccgcga aacctcgtca
      121 cggcaacccg ctatctcaac ataacccgtc ctcaaccgcc agcctgcacg tcaatttcgc
      181 ggctggccag cgcctcgacg aatggccgca cgtcgacggc gggcaacggg cgggcgtaca
      241 ggtaaccctg cagcaggtcg caaccgaatt cgcgcagcaa ctgctgctgt tcgtgactct
      301 ccacgccttc cgccaccacc tgcaggccca ggctgcggcc cagcgcgatg atggaccgca
      361 cgatcgcgcg atcgccgact tcggtcatca ggttgcggac gaacgtgcgg tcgatcttga
      421 tctggtggac cgtcaggttc ttcagcgatt cgagattgga ataaccggtg ccgaaatcat
      481 ccaccgacac ccggatgccg ctggcggtca ggctttccag caccggcagc ccgcccttca
      541 cgtcctgcac caggtggcgt tcggtgattt ccagcaccag atcgtcgttg accacgccgt
      601 gtttcttcat tgcaccggtc aggtgctgct ggaacttgcc ggccacccgc aactgcaggc
      661 cggacacgtt gatcgccacg tagaacggcg gcaggttctc gcgcttccac gttgccacct
      721 gccggcacac ctcgttgacc acccatgcgc cgatcggctc gatgagccgc gactcctcgg
      781 caaggctgat gaaggtcgac ggccccacca cgcccatgcc cggccggttc cagtacagca
      841 gggcctcgac gcccgccagc cgctgcgtgc gcatgtccac gatcggctgg aagcgcagcg
      901 tgaactgcga gcgcacgatc gcgacccgca aggcggcctg catgtcgtgc cgccagctca
      961 ccgcctcgcc catccaaggc tggaagcgca gcaccgcgtt gccgccctct tccttggcgc
     1021 ggaacagcgc ggtgtccgcc tggcgcacca ggttttccgc atcctgcgca tcgtcgggga
     1081 acatgctgaa cccggcgctg gccgcgatgt ccagcaagcg gccctcaact tcgaccggct
     1141 tgcacagctg ttccatcaac tgcccggtca gcacctcggc ggcggcggcg tcgatgttcg
     1201 gcatcagcag caggaattcg tcgccgccga accggcacag gatgtcgtcc tcgcgcatgt
     1261 gctggccgag ccgttgcgcc gccgcgcaga tcacgtcgtc gcccacgctg tggccggcgg
     1321 tgtcgttgat ctccttgaag ttgtcgagat cgaagaacac caccgcgatc ggctggccgg
     1381 cgtagcgcgc ggtcgccagc gcctgctcga actggccacg caggtgcgtg cggttgggca
     1441 ggcccgtcag cgaatcgaaa tatgcgaggt ggcggatgcg cgcctgcgcg taacgcagct
     1501 cggccgtgtc gatgcagacg tggatgcgga agatcacttc gcccgaagca tcacgcaccg
     1561 cttcggtgga ggtttccagc gtcttggtct cgccgttgtg caggcgccac gccacctcgc
     1621 cactccacga gccgccgtcg cgcagcgcct gctcgcgcgc gcggaccgcg tcggaatcca
     1681 cctgcacgtc gcgcaacagg tgcccggtca attcttcctg ggtgtaaccg gtcatgccga
     1741 ggaacgcacg gttgaccgaa aggatgcgat cgtgggcgtc gctgatcacg atgccgtcgc
     1801 tgccggattc gaacacgctg gccgcgatct gcaactggcg ctcgttgccg atctgctcgg
     1861 tgatgtcggt gtaggaaccc gccacgcgca ccggcgtgcc atcggccgcg tactgggcga
     1921 cgctgcgcgc gaggatcgtc agcacccgcc cgtcgcgggt gcgcatgcgc atcacgcgcc
     1981 gcaactcgtc gcgacggccc tgctccagat gctcgtacag cgcggcgcgc gcggtgtcgt
     2041 aatcctcggg cagcacgatg cggcggatgt catcgggacc cgacaattcg gtctcgtcgt
     2101 acccgagcat ctcgcgcacg cgcggcgaaa aatagatccg gcgcgtggcg agatcgaaat
     2161 cccagatgcc gtcgttggcg ccctcggcca ccagccggta gcgctcgcgg ctgacctgca
     2221 gttcacgcgt gatgcgctgc tggcggcgca gcgacaccac cgcgagcacg atgccggtca
     2281 atgccgcgac gatcgcgacg acaagcagga tcacgttcac gctctgccac gccctcttgc
     2341 gagccacggc cgcagcggac ccggtttcga ctgcccgccg gcacgcagcc tacccctgcg
     2401 cgcgtcgtgc agcttacccg atccgttcga gcacgtaacc gccgacatgg atcaccggag
     2461 cggccagcca gtggtccgcc agaaggaaac cgaacagcgc gatcaggtac acgatggagt
     2521 agccgaacgc gctcatcgcg aagcgctcgt cgggcggatt catcaagcgg atcgcgtagt
     2581 agagatacgc gatgcccagc accgccgcgc cgcccagata cagcagcccg ctcatgccgg
     2641 tgaggtacgg cagcaggctg actagcacca acaggatcgt gtagaacagc acgtgccagc
     2701 gggtgtactc cacgccgtag accaccggca gcatcgggat gcaggcgcgc cggtaatcct
     2761 cgcggcggaa gatcgccagc gaccagaaat gcggcggcgt ccacgcgaac acgatcagca
     2821 ccagcagcag gccgtaagcc cagtcgctcg gcgcctgcat gcccgtcacc gccgcccagc
     2881 cgagcagcgg cgggatcgcg ccggccagtc cgccgatcac gatgttctgc gg
//
LOCUS       DASSVL010000493         3857 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_618670, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000493 DASSVL010000000
VERSION     DASSVL010000493.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3857)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3857)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3857
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_618670"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1000)
                     /gene="pcnB"
                     /locus_tag="VFM52_08605"
     CDS             complement(<1..1000)
                     /gene="pcnB"
                     /locus_tag="VFM52_08605"
                     /EC_number="2.7.7.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007508041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:1990817 - poly(A) RNA polymerase activity
                     [Evidence IEA];
                     GO_process: GO:0006378 - mRNA polyadenylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polynucleotide adenylyltransferase PcnB"
                     /protein_id="HET8765267.1"
                     /translation="MNAEARNEARPALHIIPRDQHTVSRKNISKAALRVLYRLNEAGY
                     DAFLVGGAVRDLLIGHTPKDFDVATNATPDEVKKLFRNCRLIGRRFRLAHVVFGPEII
                     EVATFRGTGEDEDAEGERRVVDGRIVRDNVWGTIEEDALRRDFRVNAMYYDISDFSVR
                     DYVGGMQDLRDRVLRLIGEPTTRYREDPVRMLRAVRLAAKLGFSVDAAAAAPFESLGP
                     LLGEAAPARLFDESLKMFLAGYGLKSFRTFEQYGLLKFMLPATARALRRGDEGLRALV
                     EQGLANTDARVVAGKSVTPAFLFAVLLWGEVRDLAHAAIEQGADRNEAWEHAAQRVV"
     gene            1152..1227
                     /locus_tag="VFM52_08610"
     tRNA            1152..1227
                     /locus_tag="VFM52_08610"
                     /product="tRNA-Glu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1186..1188,aa:Glu,seq:ctc)
     gene            1427..1756
                     /gene="fdxA"
                     /locus_tag="VFM52_08615"
     CDS             1427..1756
                     /gene="fdxA"
                     /locus_tag="VFM52_08615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005994928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin FdxA"
                     /protein_id="HET8765268.1"
                     /translation="MTFVVTDNCIKCKYTDCVEVCPVDAFHEGPNFLAIDPDECIDCT
                     LCEPECPAQAIFPEDDVPAGQENFIALNGELAKLWPVITEKIDPPADVKEWDGVPDKL
                     GKGLLER"
     gene            complement(1835..2398)
                     /locus_tag="VFM52_08620"
     CDS             complement(1835..2398)
                     /locus_tag="VFM52_08620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008439296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8765269.1"
                     /translation="MKKTSLLVTLPTLALAGLLLSGCGMFRSTKAWETAKQETPLEIP
                     PGMDTPPANDALVIPPPGSEQSAAAPASQVADGFVVAGTVDATYQKIGQAIEGGGIGQ
                     LASHDDTAHSYTVNVVGGVAPAAKKGFFGRLFGSDKQKSTNLGGASHPVVITVAPSGD
                     SGSEVHAQGNAGAVAKVIDALKGRLGG"
     gene            complement(2436..3329)
                     /gene="dapA"
                     /locus_tag="VFM52_08625"
     CDS             complement(2436..3329)
                     /gene="dapA"
                     /locus_tag="VFM52_08625"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017460909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008840 - 4-hydroxy-tetrahydrodipicolinate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate synthase"
                     /protein_id="HET8765270.1"
                     /translation="MDIRGSICALATPFAADGSLDLPAYGRLIDYQLENGTQGLVVAG
                     STGEAHMLDAAEFDRLVTFAVKHVAGRVPVIAGTGEAATAKTVEATRHAATLGADAAL
                     VVAPYYVRPTQEGMRRHFLEVADHAGVPILLYNVPSRTACDMQPETVAQLADHPAIIG
                     VKEARGDDERIQALAKLARPGFVFLSGDDYSAARAMLAGAAGTVSVVANLVPKAFREF
                     CDAATARDATATARCGDALAPLLAALTCAPNPIAVKAGLPELGFGAATPRLPLVELAE
                     GAERARIRETLAQLAPRRRAA"
     gene            3498..>3857
                     /locus_tag="VFM52_08630"
     CDS             3498..>3857
                     /locus_tag="VFM52_08630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008439299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACT domain-containing protein"
                     /protein_id="HET8765271.1"
                     /translation="MLIHALTATDRSPLTALTRRIADAGCGLAESRVATIGNDVSVML
                     LASGAWDALAKLETALNKFARDEDVRLTHYRTQPREPNSHLLPYLVEIVSADRPGIVA
                     SIVEFFSQQEISVEQLNS"
BASE COUNT          630 a         1354 c         1270 g          603 t
ORIGIN      
        1 ccaccacgcg ctgcgcggcg tgctcccagg cctcgttgcg atcggcgccc tgctcgatcg
       61 ccgcatgcgc gagatcgcgc acctcgcccc acagcagcac cgcgaacagg aatgccgggg
      121 tgaccgactt gcccgcgacc acgcgcgcgt cggtattggc cagcccctgc tcgaccagcg
      181 cgcgcaggcc ctcgtcaccg cgccggagcg cgcgtgccgt cgccggcagc atgaatttca
      241 gcaagccgta ctgctcgaag gtacggaaac tcttgagccc gtagccggcg agaaacatct
      301 tgagcgactc gtcgaacagg cgcgccggcg ccgcctcgcc cagcaacggg ccgagcgact
      361 cgaacggcgc cgccgcggcg gcatccacgc tgaaacccag cttcgcggcc aggcgcaccg
      421 cgcgcagcat gcgcaccggg tcctcgcggt agcgcgtcgt cggttcgccg atcaggcgca
      481 gcacgcggtc gcgcaaatcc tgcatgccgc cgacgtagtc gcgcaccgag aaatcgctga
      541 tgtcgtagta catcgcgttg acgcggaaat cgcggcgcag cgcgtcctcc tcgatcgtgc
      601 cccacacgtt gtcgcgcacg atgcggccgt cgacgacacg gcgctcgccc tccgcgtcct
      661 cgtcctcgcc ggtgccgcgg aaggtcgcga cctcgatgat ctccgggccg aacaccacgt
      721 gcgccagacg gaaccggcgg ccgatcagcc ggcagttgcg gaacagcttc ttgacctcgt
      781 cgggcgtcgc gttggtggcg acgtcgaaat ccttcggcgt gtgcccgatc aagaggtcac
      841 gcaccgcgcc accgacgagg aacgcgtcgt agccggcctc gttcaaccgg tacagcacgc
      901 gcagcgcggc cttgctgatg ttcttgcggg agaccgtgtg ctggtcgcgc ggaatgatgt
      961 gcagcgctgg cctggcttcg ttcctggctt cggcattcaa gcggatggga tccttgcggg
     1021 taacgggttc ggcatcgtcg gaaaaccgcg gcgacgaggc cgcgaccgtg gccgcaggca
     1081 ctgcccgccg gcgcccgcag gcgttgccgg atgcaacaat tccgctatac taccgcgcct
     1141 cgcaacattg cgctcccatc gtctagcggc ccaggacacc gccctctcaa ggcgggaaca
     1201 cgagttcgaa cctcgttggg agcgccatcc atgctgataa accgtggcac atccctgcca
     1261 cggtgtgccg cgggccagcc ctggcgcggc gcgcaccgtc gcttccggca aggcgttgat
     1321 ctgcatcacg cgtcggcttt tgccgcgcgc cgatactgat cgcggcgccg cggtacgccg
     1381 cagcgttgcg tcataattcg tgggtcatca ggagggctgg agcaccatga cctttgtcgt
     1441 caccgacaac tgcatcaagt gcaagtacac cgactgcgtc gaggtatgcc cagtcgatgc
     1501 gtttcacgaa ggcccgaact tcctcgcgat cgaccccgac gagtgcatcg actgcacgct
     1561 gtgcgagccg gaatgcccgg cgcaggcgat cttccccgaa gacgacgtgc cggcgggcca
     1621 ggaaaatttc atcgcgctga acggcgagct ggcaaagctg tggccggtga tcaccgagaa
     1681 gatcgaccca ccggccgacg tcaaggaatg ggacggcgta ccggacaagc tcggcaaggg
     1741 cctgctcgaa cgctgaccac tccgcgtcca ccgcatgcaa aaacgccgcc tttcgaggcg
     1801 gcgttttcgt tggtgcgcaa gcggcgtgaa acggtcagcc gccgaggcgc cctttcaacg
     1861 cgtcgatgac cttggccacc gcaccggcat tgccctgcgc gtgcacttcg ctgccggaat
     1921 cgccactggg tgccaccgtg atcacgaccg gatgcgaggc gccgccgagg ttggtggact
     1981 tctgcttgtc gctgccgaac aggcggccga aaaagccctt cttcgcggcc ggcgccacgc
     2041 cgccgaccac gttcaccgtg tagctgtgcg cggtgtcgtc gtggctcgcc agctggccga
     2101 tgccgccgcc ttcgatggcc tggccgatct tctggtaggt ggcatcgacc gtgcccgcga
     2161 cgacgaagcc gtcggccacc tgtgacgccg gcgccgccgc cgactgttcc gaacccggcg
     2221 gcgggatcac cagcgcgtca ttggcgggtg gcgtatccat gcccggcggg atctccagcg
     2281 gcgtttcctg cttggcggtt tcccacgcct tggtcgaacg gaacatgccg caaccggaca
     2341 ggagcaaccc ggcaagcgca agcgtcggca gggtcacgag gagcgatgtt ttcttcatgc
     2401 aggcaattcc gtgggaaaga cggtacgggg gtcgatcagg cggcgcggcg gcgtggtgca
     2461 agctgtgcca gtgtctcgcg gatgcgggcg cgctcggcgc cctccgccag ctcgaccagc
     2521 ggcaggcgtg gtgtcgccgc accgaaaccg agttcgggca ggccggcctt cacggcaatc
     2581 ggattcggtg cgcaggtcag cgccgcaagc agcggtgcca gcgcatcgcc gcaccgcgcc
     2641 gtggccgtgg cgtcgcgcgc cgtcgcggca tcgcagaatt cgcgaaacgc cttcggcacc
     2701 aggttggcca ccaccgacac cgtaccggcg gcgccggcca gcatcgcgcg cgcagcgctg
     2761 tagtcgtcgc cggaaaggaa gacgaagccg gggcgcgcga gtttcgccag cgcctggatg
     2821 cgctcgtcgt cgccgcgggc ttccttgacg ccgatgatcg ccgggtgatc ggccagttgg
     2881 gcgacggttt ccggctgcat gtcgcacgcg gtgcggctgg gcacgttgta gagcaagatc
     2941 ggcacgcccg cgtggtcggc cacttcaaga aagtgccggc gcatgccctc ctgcgtcggc
     3001 cgcacgtagt acggcgccac gaccagcgcg gcgtcggcgc ccagcgtcgc cgcatgccgg
     3061 gtcgcttcca cggtcttcgc ggtggccgcc tcgccggtac cggcgatcac cggcacgcgt
     3121 cctgccacgt gcttcaccgc gaacgtcacc aggcgatcga actcggcagc atcgagcatg
     3181 tgcgcttcac cggtggaacc ggccaccacc aggccctgcg tgccgttttc gagctggtag
     3241 tcgatgaggc gcccgtacgc cggcagatcg agtgaaccat cggcggcgaa cggcgtcgcc
     3301 agcgcgcaga tgcttccgcg aatgtccaag gttgcgatac cgcttgatga tcgatcgagc
     3361 ctcgcatgtt acttgcggct tcgcgggagc ggcaagtaag ctggccggcg cactttccac
     3421 gccgctcggg caccatacag gtcgccatct tgaaacccac gcactccggc aacgcacgcg
     3481 tcagcggcga caaccaactg ttgatccacg cgctgaccgc gaccgaccgc tcgccgctca
     3541 ccgcgttgac ccggcgcatc gccgacgccg gctgcgggct ggcggaatcg cgcgtggcga
     3601 cgatcggcaa cgacgtctcg gtgatgctgc tggcaagcgg cgcgtgggat gcgctggcca
     3661 agctggaaac cgcgctgaac aagttcgccc gcgacgagga cgtgcgcctc acccactacc
     3721 gcacccagcc gcgcgagccc aactcgcacc tgctgccgta tctggtggag atcgtgtccg
     3781 ccgaccgccc cggcatcgtc gccagcatcg tcgagttctt cagccagcag gaaatcagcg
     3841 tcgaacagct gaactcg
//
LOCUS       DASSVL010000494         5908 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1268193,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000494 DASSVL010000000
VERSION     DASSVL010000494.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 5908)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5908)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5908
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1268193"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..211)
                     /locus_tag="VFM52_08635"
     CDS             complement(<1..211)
                     /locus_tag="VFM52_08635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007513602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase small subunit"
                     /protein_id="HET8765272.1"
                     /translation="MNPVTRITSRTAVLLDENIDTDRIIPARFLTTTTREGLGKRCFN
                     DWRYLADGSDNPDFPLNKPEAQGCSI"
     gene            complement(208..1617)
                     /gene="leuC"
                     /locus_tag="VFM52_08640"
     CDS             complement(208..1617)
                     /gene="leuC"
                     /locus_tag="VFM52_08640"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008438678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009316 - 3-isopropylmalate dehydratase
                     complex [Evidence IEA];
                     GO_function: GO:0003861 - 3-isopropylmalate dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009098 - leucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase large subunit"
                     /protein_id="HET8765273.1"
                     /translation="MGKTLFEKIWDAHVVAAETADTPATLYIDLHLVHEVTSPQAFDV
                     LRARNLKLHRPDRTLATLDHSTPTLSPDAQGERPYTTPEAKAQVAQLEQNTAAFGVEL
                     NGWGSANRGIVHVMGPELGATQPGMTIVCGDSHTSTHGAFGALAFGIGTTEVGHVLAT
                     QCLLQRKPKTLAIVVDGKLPGGVAAKDLILHIIGTIGVNGGTGHVIEYRGAAVEALTM
                     EERMTVCNMSIEAGARAGLIAPDATTFAWLKDRPRAPKGADWDAAVARWKKLKSDPDA
                     RYDREVHIDAASVVPTVTWGTHPGTAIPMNAPVPAPRNAHDQRALDYMHSVPGTPMQG
                     TKVDVVFVGSCTNARLSDLRVVARVLRGRHVADGLRMLVVPGSEQVRQDAEAEGLHEV
                     FLAAGAEWRLPGCSMCIAMNGDSAKPGELVVSTSNRNFEGRQGKGVRTVLASPATAAA
                     SAIAGVIADPREYLKEAAA"
     gene            complement(1617..2555)
                     /locus_tag="VFM52_08645"
     CDS             complement(1617..2555)
                     /locus_tag="VFM52_08645"
                     /EC_number="2.6.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007808737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004084 - branched-chain-amino-acid
                     transaminase activity [Evidence IEA];
                     GO_process: GO:0009081 - branched-chain amino acid
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid transaminase"
                     /protein_id="HET8765274.1"
                     /translation="MNHTAFVWHNGQLKPWHEATVHVSTHALHYGSSVFEGERVYATP
                     DGPAYFRLADHTQRLFESAKVYEIDVGYSEAEINAASHAVIRANHLQSAYVRPIVFRG
                     AGGLGVLPRGEAPVDVAIMALEWGKYLGEAAERGADVCVSSWHRPAPNTFPSWAKAGG
                     NYLSSQLIGLEARRGGYDEGIALGPNGLLSEGSGENLFVVKRGKLITPPTSAGILAGI
                     TRDSVLTLAAELGIAVEERDLPREALYSADEVFMTGTAAEITPVRSVDRKPVGTGKPG
                     ELTRTLQQAFFGLFDGSTADKWGWLTKVDEREQEAA"
     gene            complement(2552..4159)
                     /locus_tag="VFM52_08650"
     CDS             complement(2552..4159)
                     /locus_tag="VFM52_08650"
                     /EC_number="2.3.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007081393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003852 - 2-isopropylmalate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009098 - leucine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0019752 - carboxylic acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-isopropylmalate synthase"
                     /protein_id="HET8765275.1"
                     /translation="MENRQHHAHDEGGDIATDHVRIFDTTLRDGEQTPGFSMDRRAKL
                     RMAQMLEALGVDVLEAGFPQASPDDFAAVAQIAETLKTTTVCALARCQRGDIDSAGRA
                     LEKAHRSRIHVFISTSPLHREFKLGMSRQQVLDASVAAVEQARGRCDEVEFSAEDAMR
                     TEPEYLAEVFSAAAAAGATTLNAPDTVGYMTPTEIAERFAYLREHVKGAAGVVFSAHC
                     HDDLGLAVANSLAAIGAGARQVECTINGIGERAGNAALEEIVMALKVRGAWFGTDSRI
                     HTQQLHPASRLLAQLTGQPVPRNKAIVGANAFAHESGIHQHGMLKHRGTYEIMRPQDV
                     GIAETTLVLGKHSGRAALRKRLEVLGHPLDDAALDALFGRFKALADKKREVTDDDLEA
                     LALGQDPAALGPWHLTQLGTSTHLGGASASVKLTHDDGREAAEAAIGDGPVDAVLRAI
                     ERATGHALDVAEFQVRAIGAGGDAQGQAHLVARHGEREWRGHGVSTDIVEATARAALS
                     IVNHIERHAPAAPVAAVANHPARKPQR"
     gene            complement(4275..4415)
                     /locus_tag="VFM52_08655"
     CDS             complement(4275..4415)
                     /locus_tag="VFM52_08655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8765276.1"
                     /translation="MSQRNSHCNRTATDRLKGVGGELRVAGNLLIGLLVLVLLITNGG
                     AG"
     gene            4995..>5908
                     /locus_tag="VFM52_08660"
     CDS             4995..>5908
                     /locus_tag="VFM52_08660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008435990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003979 - UDP-glucose 6-dehydrogenase
                     activity [Evidence IEA];
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0000271 - polysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide sugar dehydrogenase"
                     /protein_id="HET8765277.1"
                     /translation="MRNLQDTKIAIVGLGYVGLPLAVEYGKHYDTLGFDINTARIDEL
                     REGRDRTLETTAQELAAAKRLRFSSSLDELRTADFYIVTVPTPIDAAKRPDLTPLVKA
                     SETLSKVLKKGDVVVYESTVYPGCTEEVCVPILANGSGLVFNRDFFAGYSPERINPGD
                     KQHRVTSILKVTSGSTPEVADFVNALYASIITAGTHRASSIKVAEAAKVIENTQRDLN
                     IALVNDLAKLFNKLGIDTLEVLQAAGTKWNFLPFRPGLVGGHCISVDPYYLTHKAQEV
                     GHHPDVILAGRRTNDGMGPYVADEVVRL"
BASE COUNT          839 a         1938 c         2127 g         1004 t
ORIGIN      
        1 ggatggagca gccttgcgcc tcgggtttgt tgagcgggaa gtcggggttg tcgctgccgt
       61 ccgccaggta gcgccagtcg ttgaagcagc gcttgcccag gccttcgcgc gtggtggttg
      121 tgaggaagcg cgccgggatg atgcggtcgg tatcgatgtt ctcgtcgagc agcacggccg
      181 tacgcgaggt gatgcgggtg accggattca tgccgcggcc tccttcaggt actcgcgcgg
      241 gtcggcgatc acgccggcga tggcgctggc ggcggcggtg gccgggctcg cgagcacggt
      301 gcgcacgccc ttgccctggc ggccttcgaa gttgcggttg gaggtggaga cgacgagctc
      361 gccgggcttg gcgctgtcgc cgttcatggc gatgcacatc gagcagccgg gcaggcgcca
      421 ctcggcgccg gcggcgagga acacctcgtg caggccctcg gcctcggcat cctggcgcac
      481 ctgctcggag ccgggcacca ccagcatgcg caggccgtcg gcaacgtgcc ggccgcgcag
      541 cacgcgggcg accacgcgca ggtcggacag gcgcgcattg gtgcagctgc cgacgaacac
      601 cacgtcgacc ttggtgccct gcatcggcgt gcccggcacg ctgtgcatgt agtccagcgc
      661 gcgctggtcg tgcgcgttgc gcggcgccgg caccggcgcg ttcatcggga tcgcggtgcc
      721 ggggtgggtg ccccaggtga cggtgggcac cacgctggcg gcgtcgatgt gcacctcgcg
      781 gtcgtagcgc gcgtcggggt cgcttttcag ctttttccag cgcgccacgg cggcgtccca
      841 gtcggcgccc ttgggcgcgc gcgggcgatc cttgagccag gcgaaggtgg tggcgtccgg
      901 cgcgatcaaa ccggcgcgcg cgccggcctc gatcgacatg ttgcacaccg tcatgcgctc
      961 ttccatggtg agcgcctcga ccgctgcgcc gcggtattcg atgacgtggc cggtgccgcc
     1021 gttgacgccg atggtgccga tgatgtgcag gatcaggtcc ttcgcggcga cgccgcccgg
     1081 caacttgccg tcgaccacga tcgccagcgt cttcggcttg cgctgcaaga ggcactgggt
     1141 ggccagcacg tggccgacct cggtggtgcc gatgccgaac gccagcgcgc cgaacgcgcc
     1201 gtgggtggag gtgtggctgt cgccgcagac gatggtcatg cccggctggg tggcgcccag
     1261 ctccgggccc atcacgtgca cgatgccgcg gttggcgctg ccccaaccgt tcagttccac
     1321 gccgaacgcg gcggtgttct gctccagctg cgccacctgc gccttcgcct ccggcgtggt
     1381 gtacgggcgt tcgccctgcg cgtcgggcga cagggtcggc gtggagtggt cgagcgtggc
     1441 cagcgtgcgg tccgggcggt gcagcttgag gttgcgcgcg cgcagcacgt cgaatgcctg
     1501 cggcgaggtc acctcgtgca ccaggtgcag gtcgatgtac agcgtggccg gggtgtcggc
     1561 ggtttccgcc gcgacgacgt gcgcgtccca gattttctcg aacagggtct tgcccatcac
     1621 gcggcctcct gttcgcgctc gtccaccttg gtcagccagc cccacttgtc ggcggtgctg
     1681 ccgtcgaaca ggccgaagaa ggcctgctgc agggtgcggg tgagttcgcc cggcttgccg
     1741 gtgccgaccg gtttgcggtc gaccgagcgc accggcgtga tctcggcggc ggtgccggtc
     1801 atgaacacct cgtcggcgct gtacagcgcc tcgcgcggca ggtcgcgctc ttccaccgcg
     1861 atacccagct cggcggcgag ggtcagcacg ctgtcgcggg tgatgccggc gaggatgccg
     1921 gcgctggtcg gcggcgtgat cagcttgccg cgcttgacca cgaacaggtt ctcgccggaa
     1981 ccctcggaga gcaggccgtt cggcccaagc gcaatgcctt cgtcgtagcc gccgcggcgc
     2041 gcttccagcc cgatcagctg gctggagagg taattgccgc cggccttggc ccagctcggg
     2101 aaggtgttcg gcgccgggcg atgccacgag gagacgcaga cgtcggcgcc gcgctcggcc
     2161 gcctcgccca ggtacttgcc ccactccagc gccatgatcg ccacgtccac cggcgcctcg
     2221 ccgcgcggca gcacgcccag tccgccggcg ccgcgaaaca cgatgggccg cacgtaggcg
     2281 gactgcaggt ggttggcgcg gatcaccgca tggctggcgg cattgatctc cgcctcgctg
     2341 tagcccacgt cgatctcata caccttggcc gattcgaaca ggcgctgggt gtggtcggcg
     2401 aggcggaagt acgccgggcc gtccggcgtg gcgtacacgc gctcgccctc gaacaccgag
     2461 gagccgtaat gcagcgcatg cgtgctgacg tggacagtgg cctcgtgcca cggtttgagc
     2521 tggccgttgt gccagacgaa ggcggtgtga ttcatcgctg gggcttccgc gcggggtggt
     2581 tggccacggc agcgacgggt gcggccgggg cgtggcgttc gatgtggttg acgatggaca
     2641 gcgcggcgcg tgccgtggcc tcgacgatgt cggtggacac gccatggccg cgccattcgc
     2701 gctcgccgtg gcgggcgacg agatgcgcct ggccctgggc gtcgccgccg gcgccgatcg
     2761 ctcgcacctg gaattcggcg acgtccagcg cgtgcccggt ggcacgctcg atcgcgcgca
     2821 gcacggcatc gaccgggccg tcgccgatgg cggcttcggc cgcttcgcga ccgtcgtcgt
     2881 gggtgagctt gaccgaggcc gaggcgccgc ccaggtgggt actggtgccg agctgggtca
     2941 ggtgccacgg gccgagcgcc gccgggtcct ggcccagcgc gagcgcctcg agatcgtcgt
     3001 cggtcacttc gcgcttcttg tcggccagcg ccttgaaacg cccgaacagc gcgtccagcg
     3061 cggcgtcgtc caacgggtgg ccgagcacct ccagccgctt gcgcaaggcg gcgcggccgg
     3121 agtgcttgcc gagcaccagc gtggtctcgg caatgccgac gtcctgcggg cgcatgattt
     3181 cgtaggtgcc gcggtgcttc agcatgccgt gctggtggat gccggactcg tgggcaaacg
     3241 cgttggcgcc gacgatcgcc ttgttgcgcg gcactggctg gccggtgagc tgcgcgagca
     3301 ggcgcgaggc ggggtggagc tgctgggtgt ggatgcggct gtcggtaccg aaccacgcgc
     3361 cgcgcacctt gagcgccatc acgatctctt ccagcgccgc gttgccggcg cgctcgccga
     3421 tgccgttgat ggtgcattcg acctgccgcg ccccggcgcc gatcgcggcc aggctgttgg
     3481 ccacggcgag cccgaggtcg tcatggcagt gcgcggagaa caccacgccg gcggcgcctt
     3541 tcacgtgctc gcgcaggtag gcgaagcgct cggcgatctc ggtcggcgtc atgtagccca
     3601 cggtgtccgg cgcgttcagc gtggtggcgc ccgccgccgc cgctgcgctg aacacctcgg
     3661 cgaggtattc cggctcggtg cgcatcgcgt cctcggccga gaactcgacc tcgtcgcacc
     3721 gcccgcgcgc ctgctcgacg gcggcgacgc tggcgtccag cacctgctgc ctggacatgc
     3781 ccagcttgaa ctcgcggtgc aacgggctgg tggagatgaa cacgtggatg cgcgagcggt
     3841 gggccttttc cagcgcgcgg ccggcgctgt cgatgtcgcc gcgctggcag cgcgccagcg
     3901 cgcatacggt ggtggtcttg agtgtttcgg cgatctgtgc gaccgcagca aaatcatccg
     3961 gcgaagcctg cggaaaaccg gcttcgagca catccacgcc gagcgcttcg agcatctgtg
     4021 ccatgcgcag cttcgcgcgc cggtccatcg agaacccggg tgtctgttcg ccgtcgcgca
     4081 gcgtggtgtc gaagatgcgc acgtggtcgg tggcgatatc gccaccctcg tcgtgcgcgt
     4141 ggtgttgccg gttttccatt gctgactccg ccttgatttg cctgcctcga ccaagaaaaa
     4201 accccgcgcc gtttccggtg cggggttctt caggtggttt caggtcttgt tgctggatac
     4261 ctggaaacgt tccctcagcc cgcacctccg ttggtaatga ggaggacgag tacaaggaga
     4321 ccaataagga ggttgccagc cacgcgaagc tcgccgccga cgcccttgag gcgatcggtg
     4381 gcggtgcggt tgcagtggct gttgcgttgc gacatgcgat cgaccgtacg gcaagccgtt
     4441 gccggatgtc aacagttttt tttgaaagta tctcgccagc ttgggttgtt cacgttcgga
     4501 cggctggacg tccgaaccgg aaaggcctca aacgtgtccg gaacccaggc ggccgatgtc
     4561 gcgcgcaacg taccggcgtc gtgtgccgac ggtgcgtggg gccggggcgc cctatgcgga
     4621 tcgagtttgg cgacgccgca gcgcgggaat gccggcgatg cgtacggggg cgtctggacg
     4681 gccgggcgcg gcgaaaagag ggcggcgacg ccaccccggc cggggatccg ggatggcgat
     4741 ggattggaaa atgtgtcacg cggaaaccgt gatgtggttc acggattcat tcaggcaaat
     4801 gtcgctatgc ggcggtaccc cgcagccgtt aggatgcgcg cagggcgtcg gctgggtcgg
     4861 cggtgcgtga tgtgcacggg ccctgcaact gtaccgatca tcgagcagcg tcgtgctgcg
     4921 gtgcagctta cggcttccca ttccggtcgc catcatcggc ggccattggt tggctcaata
     4981 tcagggatgc ccgcatgcgg aatctgcaag acacgaagat cgccatcgtc ggcctgggct
     5041 acgtcggcct gccgctggcg gtggagtacg gcaagcacta cgacacgctc gggttcgaca
     5101 tcaataccgc gcgcatcgac gagctgcgcg aagggcgcga ccgcacgctg gagacgaccg
     5161 cgcaggaact ggcggcggcg aagcgcctgc ggttttcctc ctcgctcgac gagctgcgca
     5221 ccgcggactt ctacatcgtc accgtgccga cgccgatcga cgcggccaag cgcccggacc
     5281 tgacgccgct ggtcaaggcc agcgagacac tgtccaaggt gctgaagaag ggcgacgtcg
     5341 tggtgtacga gtccacggtg tatccaggct gcaccgaaga agtgtgcgtg ccgatcctcg
     5401 ccaacggttc cggcctggtc ttcaaccggg atttctttgc cggctacagc ccggaacgca
     5461 tcaaccccgg cgacaagcag catcgcgtca ccagcatcct caaggtcacc tcgggttcga
     5521 cgccggaggt cgccgatttc gtgaatgcgc tgtacgcgtc gatcatcacc gcgggtacgc
     5581 accgggccag cagcatcaag gtggccgagg cggcgaaggt gatcgagaac acccagcgcg
     5641 acttgaacat cgcgctggtc aacgacttgg ccaagttgtt caacaagctc ggcatcgaca
     5701 cgctcgaagt cctgcaggcc gccggcacga agtggaattt cctgccgttc cggcccggcc
     5761 tggtcggcgg ccactgcatc agcgtcgatc cgtactacct cacccacaag gcgcaggaag
     5821 tcggccatca cccggacgtg atcctcgcgg gccgccgcac caacgatggc atggggccgt
     5881 acgtggccga cgaggtggtg cgcctgat
//
LOCUS       DASSVL010000495         2888 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_618698, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000495 DASSVL010000000
VERSION     DASSVL010000495.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2888)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2888)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2888
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_618698"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1040)
                     /locus_tag="VFM52_08665"
     CDS             complement(<1..1040)
                     /locus_tag="VFM52_08665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008217427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase D-like domain-containing protein"
                     /protein_id="HET8765278.1"
                     /translation="MRPRWLILAVLLATLPLQGCTLSRAHLREAAAIVAASPDRGDTC
                     TAADRCAAPSPLLDAARAALAASTPGHPVNVVTLLDDSEAALAARISLIRAARESIDV
                     QTYIWDEDDVGQLVLNELVAAARRGVKVRILADQLFSFEDLNLLDRLARVSPNLEVKL
                     YNPTFHDARTSPLQFTAGILCCFMKFNQRMHNKLLLVDDAIGITGGRNYQNRYFNWDP
                     DFDYLDRDVMAGGPVGREMADSFALFWNHRRAVPLIRLRDVNRRIRGDRAPPGWPAPH
                     YTDPARVARAQAEAEDPDWLAAWIGDDTLRVSQVNYFSDLPAKTDEPTKRSARELTGR
                     LMRMVADAKREVV"
     gene            complement(1129..1602)
                     /locus_tag="VFM52_08670"
     CDS             complement(1129..1602)
                     /locus_tag="VFM52_08670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011035432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HET8765279.1"
                     /translation="MHELILLRHAEAEPPATTGADRDRALSERGAREATDAGRWLAGH
                     GAHPQRVLSSPARRTTQTAELALAAFASPPALQTANEIYDASPGELLALLDQHFDAES
                     VLLVGHNPGIERLVALLVEGRSDGFRGMPPAGLAVLYLNGSLEPASARLDAFWSP"
     gene            complement(1632..2264)
                     /locus_tag="VFM52_08675"
     CDS             complement(1632..2264)
                     /locus_tag="VFM52_08675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007514418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ParA family protein"
                     /protein_id="HET8765280.1"
                     /translation="MLVTLVASSKGGCGKSTVVTQLAAAWSQAGQRTVIVDADRQGSS
                     FRWAERRPENLPGVQAFEGARKALQRVPEDAQQLLIDTPAGSGERELEPFLDRASVLL
                     VPVLPSRFDLDATLRFLDELKTIARIRNGRLPVALVANRLKPWTNASQAAVDELAAAA
                     PFPIAARLRDSQAYVLLTALGKGIFDYQSEQVRGHQQDWKPLLRWIKRQA"
     gene            complement(2313..>2888)
                     /locus_tag="VFM52_08680"
     CDS             complement(2313..>2888)
                     /locus_tag="VFM52_08680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8765281.1"
                     /translation="AKAAAATHYDDYAGASLSALAGVVDALPPPAATQGPGGASGVQA
                     LIVLGNARLQPRPLLPPVAQWCDANASDTEAKVDCLRLGKLLTWGSSPLARSLGLHLV
                     QTLGDDPAAATKARNDAHDLAWQVQNHARLALQAATDASIAQALLATAKAGGTEMAQT
                     QALLRARGISLTAPGSWQPAGPAAAASAPSP"
BASE COUNT          383 a          958 c         1106 g          441 t
ORIGIN      
        1 accacttcgc gcttcgcgtc ggcgaccatg cgcatcaggc ggccggtgag ctcgcgtgcg
       61 ctgcgcttgg tcggctcgtc ggtcttggcc ggcaggtcgc tgaagtagtt cacctggctc
      121 acgcgcaggg tgtcgtcgcc gatccacgcg gcgagccagt cggggtcttc cgcttcggcc
      181 tgggcgcgcg ctacccgagc gggatcggtg tagtgcggcg cgggccagcc gggcggcgcg
      241 cggtcgccgc ggatgcgccg gttgacgtcg cgcaggcgga tcagcggcac cgcacgccgg
      301 tggttccaga acagcgcgaa gctgtcggcc atctcgcggc ccaccgggcc gccggccatc
      361 acgtcgcggt cgaggtagtc gaagtccggg tcccagttga agtagcggtt ctggtagttg
      421 cgcccgccgg tgatgccgat ggcgtcgtcc accagcagca gcttgttgtg catgcgctgg
      481 ttgaacttca tgaagcagca caggatgccg gcggtgaact gcagcggcga ggtgcgggcg
      541 tcgtggaagg tcgggttgta cagcttcacc tcgaggttgg ggctgacccg cgcgaggcgg
      601 tcgagcaggt tgaggtcctc gaacgagaac agctggtcgg cgaggatgcg caccttgacc
      661 ccgcgccgcg ccgcggccac cagctcgttc aataccagct ggccgacgtc gtcctcgtcc
      721 cagatatagg tctgcacgtc gatgctttcg cgcgccgcgc ggatcaggct gatgcgggcg
      781 gcgagcgcgg cttcgctgtc gtcgagcagg gtgacgacgt tgaccgggtg ccccggcgtc
      841 gacgccgcca gcgccgcgcg cgcggcgtcg agcagcggcg agggcgcggc gcagcggtcg
      901 gcggcggtgc aggtgtcgcc gcggtccgga ctggcggcga cgatggctgc cgcttcgcgg
      961 aggtgtgcgc ggctcagcgt gcagccttgc agcggcaagg tggcgagcag cacggcaagg
     1021 atcaaccaac gtggacgcat ggatccggaa caaggtggtg acgggcccgg ccgcgtcggc
     1081 ggcgccgggc gaaggccgac cgtcgggcgg ccggcgtgac gaagtgtttc agggtgacca
     1141 gaatgcgtcg aggcgcgcgc ttgccggctc cagcgaacca ttcaggtaca gcacggcgag
     1201 gccggccggc ggcatgccgc ggaagccgtc ggagcggccc tcgaccagca gcgcgacgag
     1261 gcgctcgatg ccggggttgt ggcccaccag cagcacgctt tcggcgtcga agtgctggtc
     1321 cagcagggcc agcagctcac ccggcgacgc gtcgtagatc tcgttggcgg tttgcagcgc
     1381 cggcgggctg gcgaacgcgg ccagcgcgag ttcggcggtt tgcgtggtgc gccgcgccgg
     1441 cgaactcagc acgcgctgcg ggtgggcgcc gtggccggcg agccagcgcc cggcgtcggt
     1501 cgcttcgcgc gcgccacgct cgctcagggc acggtcgcga tcggcgccgg tggtcgcggg
     1561 aggttcggct tcggcatggc gcagcaggat cagttcgtgc atgggtgact ccggtcgatg
     1621 ggaacgctgg atcaggcctg gcgcttgatc cagcgcagca gcggtttcca atcctgctgg
     1681 tggccccgca cctgttcgga ctggtagtcg aaaatgccct tgcccagcgc cgtgagcagg
     1741 acgtaggcct gactgtcgcg caatcgggcc gcgatgggaa acggcgccgc cgcggccagc
     1801 tcgtcgaccg cggcctggct ggcgttggtc cacggcttca gccggttggc gacgagcgcc
     1861 accggcagcc tgccgttgcg gatgcgcgcg atcgtcttga gttcatccag gaaacgcagc
     1921 gtggcgtcga ggtcgaagcg cgacggcagc accggcacca gcaatacgct ggcgcgatcg
     1981 aggaacggct ccagctcgcg ctcgccgctg ccggcggggg tgtcgatcag cagttgctgc
     2041 gcatcctccg gcacccgttg cagggccttg cgcgcgcctt cgaacgcctg cacgccgggc
     2101 aggttttccg gccgtcgttc ggcccagcgg aaactcgacc cctggcggtc ggcatcgacg
     2161 atcaccgtgc gctggccggc ttgcgaccag gccgcggcca actgcgtcac cacggtgctc
     2221 ttgccgcacc cgcccttgct gcttgccacc agcgtcacaa gcatggaccg ctccgctcgc
     2281 gaaggtggca ccagcctaat ggagtgacgg ggttatgggg agggggcgga tgccgccgcc
     2341 gcggggccgg ccggttgcca gctgcccggt gcggtcagcg agatgccgcg cgcacgcagc
     2401 aaggcctgcg tctgcgccat ctcggtgccg ccggccttgg cggtggcgag cagcgcctgc
     2461 gcgatgctgg cgtcggtcgc cgcctgcagc gcgagccgtg cgtggttctg cacctgccag
     2521 gcgaggtcgt gcgcgtcgtt gcgcgccttg gtcgcggcgg ccgggtcatc gcccagggtc
     2581 tgcaccaggt gcagaccgag cgaacgtgca agcgggctgg aaccccaggt gagcagcttg
     2641 ccgaggcgca ggcagtcgac cttggcttcg gtgtcgctgg cgttggcgtc gcaccactgt
     2701 gccacgggtg gcagcagcgg gcgcggctgc aggcgtgcgt tgccaagcac gatcagcgcc
     2761 tgcacaccgg acgcgccgcc ggggccttgc gtggcggccg gcggcggcag cgcatcgacg
     2821 actccggcca acgcgctcag gctggcgccg gcgtagtcgt cataatgcgt ggccgcggcc
     2881 gccttggc
//
LOCUS       DASSVL010000496         3036 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1155729,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000496 DASSVL010000000
VERSION     DASSVL010000496.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3036)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3036)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3036
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1155729"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..873
                     /locus_tag="VFM52_08685"
     CDS             <1..873
                     /locus_tag="VFM52_08685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019397914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Zn-binding domain-containing protein"
                     /protein_id="HET8765282.1"
                     /translation="DGNFVVVDRTGGRQTIIAEVDFSSAPLMLYEGAIHMVQSVPYQV
                     ERLDWEGRKAFVTRTHVDYYTDAIDYTRLKVLESFAHAPAGIGQCHHGEVHVVRRVAG
                     YKKIRYYTHESIGCGDVNLPDLEMHTSAVWWQLPQATLDTLFASRQDALDGFLAAAYA
                     LHVVARIAVMADGADLHQAVGSGDGAWSAHSDGGGRGQIRATGDGAPNLAALERFTPT
                     VFLYDNYPGGIGLSEPLWRRQAELVGNAIDLVRGCPCRAGCPSCVGPVLDDRMPVDTA
                     PKTHALRVLGALAA"
     gene            1098..1814
                     /locus_tag="VFM52_08690"
                     /pseudo
     CDS             1098..1814
                     /locus_tag="VFM52_08690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017158075.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease H-like domain-containing protein"
     gene            2057..>3036
                     /locus_tag="VFM52_08695"
     CDS             2057..>3036
                     /locus_tag="VFM52_08695"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HET8765283.1"
                     /translation="MTPSTPSRRAWLIYFVGVFAYVVAVTQRTTIGVAGVAAAARFHA
                     DAATLSLLAVLQLVVYAGMQVPVGMLIDRLGPRRLIIAGTTLMLVGQVLVGTAATLDI
                     AIAGRVLVGAGDATVFTSVVRLVAAWFSGRIVPQLFQWLGLLGQLGQVVSAVPFALLL
                     NESGWTHAFLSAAASVLLALVAAILVIRDHPAHAPPLARPASLRDSLRLLRAAMAQPG
                     TWLGFWTHYTAMASTTTFSLMWGYPFMVHALGYAPALAAQLLIVPAAAGALAGPLLGR
                     ASARHPRRRARLVLGVVALICLAWALLLAWPGSPPFALLLATLVAIGIGGP"
BASE COUNT          363 a         1146 c         1058 g          469 t
ORIGIN      
        1 gacggcaatt tcgtcgtagt cgaccgcacc ggtggccgcc agaccatcat cgccgaggtg
       61 gatttcagtt ccgcgccgct gatgctctac gaaggcgcga tccacatggt gcagtcggtg
      121 ccctaccagg tcgagcggct cgactgggaa ggccgcaagg cgttcgtcac ccgcacccac
      181 gtcgactact acaccgacgc catcgactac acccggctca aggtgctgga gagtttcgcg
      241 cacgcgccgg ccggcatcgg gcaatgccac cacggcgagg tgcacgtggt gcgccgcgtc
      301 gccggctaca agaagatccg ctactacacg cacgagagca tcggctgcgg cgacgtcaac
      361 ctgcccgacc tcgaaatgca caccagcgcc gtgtggtggc agctgccgca ggccacgctg
      421 gacacgctgt tcgccagccg ccaggacgcg ctcgacgggt tcctcgcggc ggcgtatgcg
      481 ctgcacgtgg tcgcgcgcat cgcggtcatg gccgacggtg ccgacctgca ccaggcggtg
      541 ggcagcggcg acggcgcgtg gtcggcgcac agcgacggcg gcggacgcgg gcagatccgc
      601 gcaaccggtg acggcgcacc gaacctcgcc gcgctcgagc gcttcacgcc gacggtgttc
      661 ctgtacgaca actaccccgg cggcatcggg ctgtccgaac cgctgtggcg acgccaggcc
      721 gaactcgtcg gcaacgcgat cgacctcgtg cgcggctgcc cctgccgtgc cggctgcccg
      781 agctgcgtgg ggccggtatt ggacgaccgc atgccggtcg acaccgcgcc gaaaacgcac
      841 gccctgcgcg tgctcggcgc gctggccgca tgagcgcgac gctggcgcag ctgcgcgcgc
      901 tgacgcgaca ggctggcgtg cgggagccgg cagcggcgtc gcataccggg ctactgcccg
      961 acttcctgcg cgagaaagcc cgccggaatg cattccgccc cacggcggtg gcggcgcacg
     1021 cgccgatgcc gtcgccacgc cgtggatcgg cggcgcccgg cagcgttgcc gcgctgcgca
     1081 ccctgctgcg cgtgcgcgcg ccggtgcctt cactacccga tgccgcaccc gaccgcgcgc
     1141 tgcccggcgt ggaaatcgcc cccggcctgc gcttcgtcac cgcgcgcctg ccgttcggca
     1201 ccgtgccgga tcgcgtcgcc ggcgggttcg accgccggcc ggatttcgac ccgcgccggc
     1261 tgctgttctt cgacaccgag accaccgggc tcgccggcgg cgccggcacc cgcgcgttca
     1321 tgatcggcgc ggcgcactgg gaccgcagcg agctcgtcgt gcgccagctg gtgatcgcca
     1381 cgctggccgc cgagccggcg atgctcgccg agttcgcccg ctggctcacg ccggacaccg
     1441 tgctcgccag ctacaacggc aagtcctacg acgcgccgct gctgcgcacg cgctaccggc
     1501 tcgcgcgcca gggtaatccg ctcgccggac tgccgcacgt cgacctcttg tacccgtcgc
     1561 gccgacgctg gcgcggccgc ttcgagaact gccgcctggc gaccatcgaa cgccgcgtgc
     1621 tcggcatcgt gcgcgaggac gacctgccgg gcagcgaggc gccggccgcg tggctcggct
     1681 acctgcgcgg cggcagcgcc gccaagctgc gccgggtcgg cgagcacaac caccaggacg
     1741 tggtgagcct cgcgcggttg ctgctgcatc ttgcgggttg gcaggctgat gagggtgtgg
     1801 gtttgctggg ctaatgccgc ccggcttcga cgccgatcct cccgttggct ggtccgctgc
     1861 aattcgatgt cggaatgaat cccgacccac ggggtcacgc cgcttcttgc aggtcgggct
     1921 tcacccgact cccgcccggg ttgccgccgc ggtgatggca accctcgcgc gggcccctgc
     1981 gtcgactccg gcgcgcacca tgccgcggcg catcatccat acttgcggcg caccgtcctc
     2041 gccgcgatcc cgaccgttga ccccctccac gccttcccgc cgcgcctggc tgatctattt
     2101 cgtcggcgtg ttcgcctacg tcgtcgcggt cacccagcgc accaccatcg gcgtcgccgg
     2161 cgtcgccgcg gccgcgcggt tccatgccga cgcggccacg ctgtcgctgc tcgcggtgct
     2221 gcagctggtg gtgtatgccg gcatgcaggt gccggtcggc atgctgatcg accgcctcgg
     2281 cccgcgccgg ctcatcatcg ccggcaccac gctgatgctg gtcgggcagg tcctggtcgg
     2341 taccgccgcc acgctggata tcgccatcgc cggtcgcgtg ctggtcggtg ccggcgacgc
     2401 gacggtgttc acctcggtgg tgcggctggt cgcggcatgg ttcagcgggc gcatcgtgcc
     2461 gcagctcttc cagtggctgg gcctgctcgg gcagctcggg caagtggttt ccgcggtgcc
     2521 gttcgcgctg ctgctgaacg aatcgggctg gacgcacgcg ttcctgagcg ccgccgccag
     2581 cgtgctgctg gcgctggtcg ccgcgatcct ggtcatccgc gatcacccgg cccacgcgcc
     2641 gccgctggcg cgcccggcca gcctgcgcga ctcgctgcgc ctgttgcgcg cggcgatggc
     2701 gcagcccggc acctggctcg ggttctggac gcactacacg gcgatggcgt cgaccaccac
     2761 gttctcgctg atgtggggct acccgttcat ggtgcacgca ctgggctacg caccggcgct
     2821 ggccgcgcag ctgctgatcg tgcctgcggc cgccggcgcg ctggccgggc cgctgctcgg
     2881 gcgcgcctcc gcccgccatc cgcgacggcg cgcgcggctg gtgcttggcg tcgtcgcgct
     2941 gatctgcctg gcgtgggcgc tactgctggc gtggccggga tcgccaccgt tcgcgctgct
     3001 gctggccacg ctggtcgcca tcggcatcgg cggccc
//
LOCUS       DASSVL010000497         6753 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_11460, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000497 DASSVL010000000
VERSION     DASSVL010000497.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 6753)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6753)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6753
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_11460"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1686
                     /gene="asnB"
                     /locus_tag="VFM52_08700"
     CDS             <1..1686
                     /gene="asnB"
                     /locus_tag="VFM52_08700"
                     /EC_number="6.3.5.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007080488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004066 - asparagine synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006529 - asparagine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine synthase (glutamine-hydrolyzing)"
                     /protein_id="HET8765284.1"
                     /translation="RRDLARCGHRFATQSDTEVIVHLYEEHGDRFVEHLNGQFAIAVW
                     DARRRRLVLARDRCGVRPLYHRHAGGRLWFGSEIKALLAGAPGAARLDPFSLAQAFTY
                     WGPVAPGSVFAGVASLPPGHTLAIEADGRETLARYWDWNFPPAGTAARWPSVEHAAGE
                     LRELLTDAVRLRLRADVPLGAYLSGGLDSSAVTALMRATGTDQLRTYSIAFDDAEFDE
                     SAQQQQMVRHLGCAHTALRCTPREIGNAFPAFIRHVEQPVLRTAGVPLMLLARQVRED
                     GRKVVLTGEGADEVLAGYDLFKEAKVRRFWARQPASRFRPLLLGRLYGYLRNSPVQHA
                     AMAQAFFGRGMQHLSRPVFAHAPRWESSRHALRFLAPELRASLAGWDALDWYEARLPA
                     AIRGWAPLARDQYVEAKSLLADYLLPAQADRPAMAHGVEGRFPFLDHRVIEFANALPP
                     HWKLRALREKDILRRALDGLLPPAIQWRTKQPYRAPDQSSFFVGGQPLDYVADLMSPA
                     RLRATGYFDAAAVGRLVEKCRRGHAIGFADNQAFVGILATQLLDEHFVRQAAA"
     gene            1726..1974
                     /locus_tag="VFM52_08705"
     CDS             1726..1974
                     /locus_tag="VFM52_08705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007080489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000036 - acyl carrier activity [Evidence
                     IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HET8765285.1"
                     /translation="MKARVRDYILENLLFSSDPSELPDDASLLDRGIVDSTGVLELVM
                     FIEETFGLHVKASAMLPENFDSVAAIAAFVEREQQALA"
     gene            1974..3533
                     /locus_tag="VFM52_08710"
     CDS             1974..3533
                     /locus_tag="VFM52_08710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007080490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I adenylate-forming enzyme family protein"
                     /protein_id="HET8765286.1"
                     /translation="MSTPPRRLLFDALFDRADDPAWGARTAAITEGQPHTYAELADAV
                     RRLATALAARGVQRGDRVAIYLDNTWPCLVAILGALVAGGVFLVINPLTKTDKLGFIL
                     DDSGARVLVTDGHIAGEFGPLLPLRPNLHVIASGALPEGLAAEPFDAVLAASTPSAMP
                     APVIALDLAALIYTSGSTGQPKGVMQTHQSMLFAARSLIQYLRLGADERILCTLPLAF
                     DYGLYQWLMAVQLGATLVLERSFAYPAQVFARMTEHAVTVFPGVPTIFAMLLSAHRRE
                     PLCFPAVTRVTNTAAALPDAQALHLREVFPNALIYKMYGLTECKRVCYLEPELLEAKP
                     GSVGKAIPGTEVYLRSPEGEPVPPGEPGILHVRGPHVMRGYWNRPELSAHMLQPGALP
                     GERVLCTHDWFRMDAEGFLYFVGRSDDIIKSRGEKVSPAEVENVLQALDGVREAAVVG
                     VPDELLGQAIRAYVVLEPDAAPGVPRIRAWCARHLEGFMVPQEIVPVASLPRTATGKV
                     SRKALLERPPA"
     gene            3542..4429
                     /gene="prmC"
                     /locus_tag="VFM52_08715"
     CDS             3542..4429
                     /gene="prmC"
                     /locus_tag="VFM52_08715"
                     /EC_number="2.1.1.297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007080491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA];
                     GO_process: GO:0018364 - peptidyl-glutamine methylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor N(5)-glutamine
                     methyltransferase"
                     /protein_id="HET8765287.1"
                     /translation="MDSLYETLRSRLAAALETLPDKPMENADTALRALWFTAAGVPRS
                     LVAASAGELPALPDAATRTLLTTLVDRRLAGEPTAHLTGRGHFMGLELLAGPDALIPR
                     VETELLARGCIALLQAAAAPHPARVIDVCTGSGNLAFAIAHHVPDAEVTGTDISPEAL
                     ALAARNREWLGLSRVGLRAGDLLAPFGSDVDGSVDLIVCAPPYIQSGKVAHMASEIAA
                     HEPRLAFDGGPLGVNLLLRLLDESPRLLRHGGWLAFEVGLGQGPAMRRRLERDGRYGE
                     VRALTDARGDIRALLARLA"
     gene            4452..5441
                     /gene="nadE"
                     /locus_tag="VFM52_08720"
     CDS             4452..5441
                     /gene="nadE"
                     /locus_tag="VFM52_08720"
                     /EC_number="6.3.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007080492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008795 - NAD+ synthase activity [Evidence
                     IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+) synthase"
                     /protein_id="HET8765288.1"
                     /translation="MMQPGPAAFAIDYAAEAGRIAARLREATARVLHKRGLVVAISGG
                     VDSSVCAALAVRALGARHVLALILPERDSATTSAQHARTLADHLGVAVETVDIAPTLE
                     AIGCYRERDAAVRRLVPAYAADWRMKIVIAGGTSGAINHFRLITEAPSGARHACDLPL
                     PEYLQIVAATNFKQRIRKTLEYYHADRLNYAVVGTPNRLEYDQGFFVKNGDGSADVKP
                     IAHLYKTQVYGLARHLGLPECVATAAPTTDTYSLAQGQDEFYFALPWAQMDLALWALE
                     HAVPAADLARALGLDDAAAEAIYADLRNKRRATRYLHLPPQLLGPEPAMEPRP"
     gene            5438..6478
                     /locus_tag="VFM52_08725"
     CDS             5438..6478
                     /locus_tag="VFM52_08725"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024917.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HET8765289.1"
                     /translation="MSHAAPATAYHTRVADLGRDRAAIVAFWQANLGDPTHRAAKFDW
                     FYANNPFGQPTIQLLYHGDTLVGCCGVAPRRMLWQGREIRAGLLADMAVDAAHRTLGP
                     ALMLHEALAASTAGQFDLLYGFPNHKSLPVVARLGYTVLGDMTRHSRVLRSAPYLRRH
                     LPRWLAAPAGTALDVAMAVRDRAYTRRGDARTITWSSTADLRMDALWQTSRHDDGLVG
                     IRDHTLLRWRFDEAPQAGTRFLLVGATADGPLHAWFACQVAGTVLRVCDYWCKAGRTG
                     IGRALPALVRTARRSGYTSISLECAAPRAVRIGAGFVPRDHQPVIARWLGSKAAREPL
                     QDYIFTNMDEDE"
     gene            6554..>6753
                     /locus_tag="VFM52_08730"
     CDS             6554..>6753
                     /locus_tag="VFM52_08730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017460542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase WbuB"
                     /protein_id="HET8765290.1"
                     /translation="MRILYHHRTQGRQVEGVHIRGIVGGLRDLGHEVEIVSFPGADPE
                     REPTAIPAAAAPRKRGLAALAAL"
BASE COUNT          958 a         2566 c         2222 g         1007 t
ORIGIN      
        1 cggcgggatc tggcacgctg cggacaccga ttcgcgacgc aatcggacac cgaggtcatc
       61 gtgcacctgt atgaagagca cggcgaccgc ttcgtcgaac acctgaacgg ccagttcgcc
      121 atcgcggtgt gggacgcgcg ccgccggcgc ctcgtgctcg cgcgcgaccg ttgcggcgtg
      181 cgtccgctgt atcaccggca cgccggcgga cggctgtggt tcggctccga gatcaaggcg
      241 ctgcttgccg gcgcgccggg cgcggcgcgg ctcgatccct tcagcctggc gcaggcattc
      301 acctactggg ggccggtcgc gccgggcagc gtgtttgccg gcgtcgccag cctgccgcca
      361 ggccacacgc tggcgatcga ggcggatggc cgcgagaccc tcgcccgcta ctgggattgg
      421 aacttcccgc cggcgggcac ggccgcccgc tggccgtcgg tggagcacgc cgccggcgag
      481 ctgcgcgaac tgctgaccga cgcagtgcgc ctgcgcctgc gcgccgacgt gccgctgggg
      541 gcctacctca gcggcgggct ggattcctcg gcggtgacgg cgctgatgcg cgcgaccggc
      601 acggaccaat tgcgcaccta ctcgatcgcg ttcgatgacg ccgaattcga cgaaagcgcg
      661 cagcagcagc aaatggtgcg ccacctcggc tgcgcgcaca ccgcgctgcg ctgcacgccg
      721 cgcgagatcg gcaacgcgtt tccggccttc atccgccacg tcgaacagcc ggtgctgcgt
      781 accgccggcg tgccgctgat gctgctggcg cgacaggtgc gcgaggatgg ccgcaaggtc
      841 gtgctgaccg gcgaaggcgc cgacgaggtg ctcgccggct acgacctgtt caaggaggcc
      901 aaggtgcgcc ggttctgggc gcgccagccg gcatcgagat tccgcccgct gctgctcggc
      961 cggctctacg gctacctcag gaactccccg gtgcagcacg ctgcgatggc ccaggcgttc
     1021 ttcggccgcg gcatgcagca cctgtcgcgc ccggtcttcg cgcatgcgcc gcgctgggaa
     1081 agctcgcgcc acgcgctgcg gttcctggcg ccggaactgc gcgcgagcct cgccggctgg
     1141 gatgcgctcg actggtacga agcgcgcctg cccgccgcga tccgcggctg ggcgccgctc
     1201 gcgcgcgacc agtacgtgga ggcgaaatcg ctgctcgccg attacctgct gccggcgcag
     1261 gccgaccgcc cggcgatggc gcacggcgtc gaaggccgct ttccgttcct cgatcatcgc
     1321 gtgatcgaat tcgcgaatgc gctgccgccg cactggaagc tgcgcgcgct gcgcgagaag
     1381 gacatcctgc gccgcgcgct cgacggcctg ctgccgcccg cgatccagtg gcgcaccaag
     1441 caaccgtatc gtgcgccgga ccagtcgagc ttcttcgtcg gcggccagcc gctggactac
     1501 gtggcggact tgatgagccc ggcgcgcctg cgcgccaccg gctatttcga cgccgccgcg
     1561 gtcggccgcc tggtcgagaa atgccggcgc ggccacgcga tcgggtttgc cgacaaccag
     1621 gctttcgtcg gcatcctggc gacgcagttg ctggatgaac atttcgtgcg gcaggctgcc
     1681 gcgtgaggaa caggggagca aggcatgtca actgaagcca cgagcgtgaa ggctcgcgtc
     1741 cgcgactaca tcctggagaa cctgctgttc agcagcgacc cgtccgaact gccggacgac
     1801 gcctcgctgc tcgaccgcgg catcgtggat tcgaccggcg tgctcgaact ggtgatgttc
     1861 atcgaggaaa ccttcgggct gcacgtgaag gccagtgcga tgctgccgga aaacttcgac
     1921 tcggtggccg cgatcgccgc cttcgtcgag cgcgagcaac aggcgctcgc gtaatgtcca
     1981 cgccaccgcg ccggctgctg ttcgatgcgc tgttcgaccg tgcggacgac cccgcgtggg
     2041 gcgcgcgcac ggcggccatt acggaaggcc aaccgcacac ctacgcggag ctcgccgacg
     2101 ccgtgcgccg gcttgccacc gcactcgccg cacgcggcgt gcagcgtggc gaccgcgtgg
     2161 cgatctacct ggacaacacc tggccatgcc tcgtcgccat cctcggcgcc ctggtcgccg
     2221 gcggcgtgtt cctcgtcatc aacccgctga cgaagacgga caagctcggt ttcatcctcg
     2281 acgacagcgg cgcgcgcgtg ctggttaccg atggccacat tgccggcgaa ttcggcccgc
     2341 tgctgccgtt gcgcccgaac ctgcacgtga tcgcgtcggg cgcgctgccc gagggtctgg
     2401 ccgccgagcc gttcgacgcc gtgctggcgg ccagcacgcc cagcgccatg ccggcaccgg
     2461 tgatcgcgct cgacctcgcc gcgctgatct acacctcggg ctcgaccggc cagcccaagg
     2521 gcgtgatgca gacgcaccag tcgatgctgt tcgccgcgcg cagcctgatc cagtacctgc
     2581 gcctcggtgc cgacgagcgc atcctgtgca cgctgccgct cgccttcgac tacggcctgt
     2641 accagtggct gatggccgtg cagctcggcg ccacgctggt gctggaacgc tccttcgcgt
     2701 atcccgcgca ggtcttcgcg cgcatgaccg aacacgcggt gacggtgttt cccggcgtgc
     2761 ccacgatctt cgccatgctg ctctccgcgc accgccgcga gccgctgtgc ttccccgccg
     2821 tcacccgcgt caccaatacc gccgccgcgt tgccggacgc acaggcgttg cacctgcgcg
     2881 aggtttttcc gaacgcgctg atctacaaga tgtacgggct caccgagtgc aagcgcgtgt
     2941 gctatctcga acccgagctg ctggaagcca agcccggctc ggtcggcaag gcgatccccg
     3001 gcaccgaggt gtatctgcgc tcgccggaag gcgaacccgt gccgcccggc gagccgggca
     3061 tcctccacgt gcgcgggccg cacgtgatgc gcggctactg gaaccgcccc gagctttccg
     3121 cgcacatgct gcagcccggc gcgctgcccg gcgagcgcgt gctgtgcacg cacgactggt
     3181 tccgcatgga cgccgagggt ttcctctatt tcgtcggccg cagcgacgac atcatcaaga
     3241 gccgcggcga gaaggtcagc ccggccgagg tcgagaacgt gctgcaggca ctcgacggcg
     3301 tgcgcgaggc cgccgtcgtc ggcgtgcccg acgagctgct cggccaggcg atccgcgcct
     3361 acgtggtgct cgagccggac gcggcgcccg gcgtgccgcg catccgcgcc tggtgcgcga
     3421 ggcatctcga agggttcatg gtgccgcaag agatcgtgcc ggtcgcaagc ctgccgcgca
     3481 ccgccaccgg caaggtcagc cgcaaggccc tgctggaacg tccgcccgcc tgaggtcgcc
     3541 catggactcc ctctacgaaa ccctgcgttc ccgcctcgcc gccgcgctcg aaacgctccc
     3601 cgacaagccg atggaaaatg cggacaccgc gctgcgtgcg ctctggttca ccgccgccgg
     3661 tgtgccgcgc tcgctggtcg ccgccagtgc cggcgaactg cccgcactgc ccgacgcggc
     3721 cacgcgcacc ctgctcacga cactggtcga ccgccggctc gccggcgagc cgaccgcgca
     3781 cctcaccggc cgtggccatt tcatggggct ggaactccta gccgggcccg acgcgctgat
     3841 tccgcgcgtg gaaaccgaac tcctcgcccg tggttgcatc gcgctgctgc aggcggccgc
     3901 ggcgccgcac ccggcgcggg tgatcgacgt ctgcaccggc tcgggcaacc tcgcctttgc
     3961 gatcgcccac cacgtgccgg acgcggaagt caccggcacc gacatcagcc ccgaagcgct
     4021 tgcgctggcg gcgcgcaacc gcgaatggct cggcctgtcg cgcgtcggct tgcgcgccgg
     4081 ggacctgctc gcgccgttcg gcagcgatgt cgacggcagc gtcgacctca tcgtgtgcgc
     4141 cccgccatac atccagtcgg gcaaggtcgc gcacatggcg agcgagattg ccgcacacga
     4201 accgcgcctt gccttcgacg gtggcccgct cggcgtcaac ctgctgctgc gcctgctgga
     4261 cgagtcgccg cgcctgctgc gccatggcgg ctggcttgcc ttcgaggtcg ggctcggcca
     4321 aggcccggcg atgcggcgcc ggctcgagcg cgatggccgc tacggcgaag tgcgcgcgct
     4381 cacggacgcg cgcggggata tccgtgccct gctcgcacgg ctcgcgtgag cccaccaagg
     4441 agaccgctgc catgatgcaa cccggtcctg ccgccttcgc catcgactac gccgccgaag
     4501 ccgggcgcat cgcggcgcgc ctgcgcgaag ccacggctcg cgtgctgcac aagcgcgggc
     4561 tggtcgtcgc gatctccggc ggcgtcgaca gctcggtgtg cgccgcgctc gcggtcaggg
     4621 cgctcggcgc ccggcacgtg ctggcgctga tcctgcccga gcgcgattcc gccacgacca
     4681 gcgcgcagca tgcgcgcacc ctggccgacc acctcggcgt cgcggtggaa accgtcgaca
     4741 tcgcacccac gctggaagcg atcggctgct accgcgagcg cgacgccgcc gtgcgccggc
     4801 tggtgcccgc ctacgccgcc gactggcgca tgaagatcgt catcgccggc ggcacgagcg
     4861 gcgcgatcaa ccattttcgg ctgatcaccg aggcgccatc gggcgcccgc cacgcgtgcg
     4921 acctgccgct gcccgaatac ctgcagatcg ttgcggccac caacttcaag cagcgcatcc
     4981 gcaagacgct cgagtactac cacgccgacc gcctcaacta cgccgtcgtc ggcactccga
     5041 accggctcga atacgaccag ggtttcttcg tcaagaacgg cgacggttcc gccgacgtga
     5101 agccgatcgc gcacctgtac aagacccagg tctacggcct ggcccgtcat ctcgggctgc
     5161 ccgaatgcgt ggcgaccgcc gcgcccacga ccgacaccta cagcctcgcg caaggccagg
     5221 acgagttcta tttcgcgctg ccgtgggcgc agatggacct cgcgctgtgg gcactggaac
     5281 acgccgtgcc ggccgccgat ctcgcccgcg cactcgggct ggatgacgct gccgccgagg
     5341 ccatctatgc tgacctgcgc aacaagcgtc gcgccacgcg ttacctccac ttgccgccgc
     5401 aactgctcgg cccggaaccc gcgatggagc cacgaccatg agtcacgccg cccccgccac
     5461 cgcctaccac acccgcgtcg ccgacctcgg ccgcgaccgc gcagccatcg ttgcgttctg
     5521 gcaggccaac ctcggcgacc cgacccatcg cgccgcgaag ttcgactggt tctacgcgaa
     5581 caatccgttc gggcagccga cgatccagtt gctctaccac ggcgacacgc tggtcggctg
     5641 ctgcggcgtc gccccgcgcc gcatgctgtg gcaaggccgc gagatccgcg ccggcctgct
     5701 cgccgacatg gcggtcgacg ccgcccatcg cacgctcggc ccggcgctga tgctgcacga
     5761 ggcactcgcc gcctccacgg ccggccagtt cgacctgctg tacgggtttc ccaatcacaa
     5821 gtcgctgccc gtcgtcgccc gcctgggcta cacggtgctc ggcgacatga cgcgccactc
     5881 gcgcgtgctg cgcagcgcgc cctacctgcg ccgccacctg ccgcgctggc tcgcggcacc
     5941 agccggcacc gcactcgatg ttgccatggc cgtgcgcgac cgcgcgtaca cacgccgcgg
     6001 cgatgcccgc accatcacct ggtcatccac cgccgacctg cgcatggacg ccctgtggca
     6061 gacgtcccgc cacgacgacg gcctggtcgg cattcgcgac cacacgctgc tgcgctggcg
     6121 cttcgacgag gcaccgcagg ccggcacgcg attcctgctg gtgggcgcca ccgccgacgg
     6181 ccccctgcat gcctggttcg cctgccaggt cgccggcacc gtgctgcgcg tctgcgacta
     6241 ctggtgcaag gccggccgta ccggcatcgg ccgcgccctg cccgccctcg tccgcaccgc
     6301 ccgccgcagc ggctacacct cgatctcgct cgaatgcgcc gcgccccgcg cggtgcggat
     6361 tggcgccggc ttcgttcccc gcgaccatca gccggtgatt gcccgctggc tgggcagcaa
     6421 ggccgcgcgg gagccgttgc aggattacat cttcaccaac atggatgaag acgaatgatg
     6481 cgatcgaacc attgaatccc gaccacgacc cgccgcgtcc cctttccttc ccgaccttgt
     6541 cccgattccg tccatgcgca ttctttatca ccaccgcacc cagggccgcc aagtagaggg
     6601 cgtacacatc cgcggcatcg tgggcggcct gcgcgacctc ggccacgagg tggagatcgt
     6661 ctcgttcccg ggcgccgatc ccgagcgtga gcccaccgcc atccccgctg cggctgcacc
     6721 gcgcaagcgc gggctggccg ccctggccgc gct
//
LOCUS       DASSVL010000498         2183 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_689176, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000498 DASSVL010000000
VERSION     DASSVL010000498.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2183)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2183)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2183
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_689176"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1143)
                     /locus_tag="VFM52_08735"
     CDS             complement(<1..1143)
                     /locus_tag="VFM52_08735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006376318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S9 family peptidase"
                     /protein_id="HET8765291.1"
                     /translation="MHHRNTWPALLVAVACLLGSAPASADYAVPPDHLLKVLKAPPPP
                     VPSVDPTGHRLLLTTSQTYPSIARVAQPYLKLAGVRLEPRNRSRHDTPGGYGIPACVA
                     DFTLVEIASGKETKVPLPAGACPGMAQWSPDGSRFAFQNVAAESVELWIGDAATGQVH
                     KVPDVRLNPIFGSTVQWLGGSKALLVKLVPAHQGPAPSDDGAPAGPDTQESLGGKGES
                     STYEARDTLTNALDEARFAYYGAAQLAVVDAGTGAVRAVGTPAIYNGVGAAPDGVHVL
                     TQAIKPPFSHAVTYQRYAHDVAVLNVSKNTATPIATLPLADRVPVHGVPEGPRDFDWR
                     ATDPATLVWAEALDHGDWNVNVAARDRVLMLKAPFTGKPTEIARTRQ"
     gene            1362..>2183
                     /locus_tag="VFM52_08740"
     CDS             1362..>2183
                     /locus_tag="VFM52_08740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007512051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase domain-containing
                     protein"
                     /protein_id="HET8765292.1"
                     /translation="MSADARRALRQLLGDVDRALATAFRDGADASVLARRRGEAVARI
                     VVHVWTACLGEVTGAALFAVGGFGRGLLFPQSDVDLLVLAEHSEPSRLRALEQCFATL
                     WDVGLKVGHAVRSADQCRSLAAADASVFTSLLDARWLAGDHALEAALGAIVHDPALWP
                     PKAYLAARLAERDARHARFDDTAYNLEPNLKDGPGGLRTLDSLRWLGRRLAHANGFGE
                     MQLEGLLDPTERAALCDAEGTLRRYRFALHLEAGRPEERLLFDYQRALAVRLGFED"
BASE COUNT          253 a          768 c          823 g          339 t
ORIGIN      
        1 ctgcctggtg cgcgcgatct ccgtcggctt gccggtgaac ggcgccttca gcatcagcac
       61 acggtcgcgc gccgccacgt tgacgttcca gtcgccgtgg tcgagcgcct cggcccacac
      121 cagcgtggcc ggatcggtgg cgcgccagtc gaagtcgcgc gggccttccg gcacgccgtg
      181 caccggcacg cggtcggcca gcggcagcgt ggcgatcgga gtcgcggtgt tcttcgacac
      241 gttgagcacg gccacgtcgt gggcgtagcg ctggtaggtc accgcgtgcg agaacggcgg
      301 cttgatcgcc tgggtcagca cgtgcacgcc gtccggcgcg gcgccgacgc cgttgtagat
      361 cgccggcgtg ccgaccgcgc gcacggcgcc ggtgccggca tcgaccaccg ccagctgcgc
      421 ggcgccgtag taggcgaagc gcgcctcgtc cagcgcattg gtcaaggtgt cgcgcgcctc
      481 gtaggtgctg ctttcgccct tgccgccgag tgattcctgc gtatccgggc cggccggtgc
      541 gccgtcgtcg gacggcgccg ggccctggtg ggcgggcacc agcttcacca gcagcgcctt
      601 gctgccgccc agccattgca cggtgctgcc gaagatcggg ttcagccgca cgtccggcac
      661 cttgtgcacc tggccggtgg ccgcgtcgcc gatccacagt tccaccgact cggcggcgac
      721 gttctggaac gcgaagcggc tgccgtccgg cgaccattgc gccatgccgg ggcaggcgcc
      781 ggccggcagc ggcaccttgg tttccttgcc gctggcgatc tccaccaggg tgaagtcggc
      841 cacgcaggcg gggatgccgt agccgccggg ggtgtcgtgg cggctgcggt tgcgcggctc
      901 cagccgcacg ccggccagct tgagataggg ctgcgccacg cgcgcgatcg acgggtaggt
      961 ctggctggtg gtgagcagca ggcggtggcc ggtcgggtcg acgctgggca ccggcggcgg
     1021 tggcgccttc agcaccttca gcaggtggtc cggcggcacc gcgtagtcgg ccgacgcggg
     1081 cgcgcttccc agcaggcagg cgaccgcgac gagcagcgca ggccaggtgt tccgatggtg
     1141 catgccgaat ctccccgtgg tcgagtagtg gccggtgtgc cggcgtccgc ggactctagc
     1201 attcgcaatt acttgcgtac cgggccattg gttggggggg ggcggccttg catgcggcgc
     1261 gccggtccga tgggccacaa tgatgattcc gccatcgagc ccgcaccgtg accgccattc
     1321 ccccgcttcc ccgcttgcct gtggcggtgc ctcgctcggg cgtgtccgcc gacgcgcgcc
     1381 gggcgttgcg gcagctgctg ggcgacgtgg accgcgcgct ggccaccgcg ttccgcgacg
     1441 gcgccgacgc gagcgtgctg gcgcggcggc gtggcgaggc ggtcgcgcgc atcgtggtgc
     1501 acgtgtggac ggcctgcctt ggcgaggtga ccggcgcggc gctgttcgcg gtcggcgggt
     1561 tcggccgcgg gctgctgttc ccgcagtcgg acgtggacct gctggtgctc gcggagcact
     1621 ccgagccgtc acgcctgcgc gcgctcgaac agtgtttcgc gacgctgtgg gatgtcggcc
     1681 tcaaggtcgg tcacgcggtg cgcagtgccg accaatgccg ctcgctggcg gcagcggatg
     1741 ccagcgtgtt caccagcctg ctggacgcgc gctggctcgc cggcgaccac gcgctcgaag
     1801 cggcgctggg cgcgatcgtg cacgatccgg cgctgtggcc tccgaaggcc tatctcgcgg
     1861 cgcggctggc cgagcgcgac gcgcgccacg cgcgcttcga cgacaccgcg tacaacctcg
     1921 agcccaacct caaggatggt ccgggtggcc tgcgcacgct ggattcgctg cgctggctcg
     1981 ggcgccggct ggcgcacgcc aacggcttcg gcgagatgca gctcgaaggc ctgctcgacc
     2041 cgaccgaacg cgcggcgctg tgtgacgccg aaggcaccct gcggcgctac cgcttcgcgc
     2101 tgcacctgga ggccggacgg ccggaggagc gcctgctgtt cgactaccag cgcgcgctgg
     2161 ccgtgcgcct cggcttcgag gac
//
LOCUS       DASSVL010000499         2233 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_81767, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000499 DASSVL010000000
VERSION     DASSVL010000499.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2233)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2233)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2233
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_81767"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(187..639)
                     /locus_tag="VFM52_08745"
     CDS             complement(187..639)
                     /locus_tag="VFM52_08745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007510318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HET8765293.1"
                     /translation="MPSAPTLCRPDSLGALLGAVRSELVHAIEAQIAAKGLELRFTQF
                     LILERLTRLGPMRATELARAVDVDCGAMTRQLDQLEHRGYLRRCPHEQDRRALRIELT
                     ADGTALWRQLAGCGEQVVAAAQAPLDPSERKQLLDYLRRMLQVLRADH"
     gene            854..1672
                     /locus_tag="VFM52_08750"
     CDS             854..1672
                     /locus_tag="VFM52_08750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015446442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015036 - disulfide oxidoreductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA disulfide reductase family protein"
                     /protein_id="HET8765294.1"
                     /translation="MNLGPFAFSTAVLALLFGFVAAQGAACFLRKRGQPDASNAIYWA
                     MGGALLLARTAYVIGWRHQYFERPLSVLNIRDGGFDLIAGLIGLCVVTAVIAWRRPAL
                     RKALAGATVVGIVAWGMALLTARALHASMQQPLPTTALQDVDGRTVTLAGFAGKPLVL
                     NLWATWCGPCRSEMPMLVAAQRTTPGVQFVFVDQGEDRAQVADFLWREGLAPQHVLID
                     ANLDLAAYYGVRGYPTTLFIGRDGVVRDRQMGELSAATLADHLRRIAPGDARRE"
     gene            complement(1785..>2233)
                     /locus_tag="VFM52_08755"
     CDS             complement(1785..>2233)
                     /locus_tag="VFM52_08755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019463868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HET8765295.1"
                     /translation="VDPRRVGIYGGSYGGFMTEMALLRAPGQFAAGAALRPPADWVTY
                     NHEYTSNILNDPQLDPEAYKASSPIEYAQNLRDPLLIEHGLIDDNVLTADSIRLYQRF
                     VELHKKNFWISLYPLERHGFVHADAWYDEYRRIDELFDTWVKRRVE"
BASE COUNT          308 a          731 c          830 g          364 t
ORIGIN      
        1 aggccacgtt gcggtcggca ccccggcgag gctgttcgcg gttttcagca tggccgggtc
       61 ggtggccgcg gcatgcgggg tgagcccgcc gccggtggcg cagccggcga gggccagggt
      121 cagtgcgacc gctgcggcaa ggggttgcag gcgcatgggt ttcggtctcg gaaagtgggc
      181 agcaggtcag tggtcggcgc gcaacacctg cagcatgcgc cgcaggtagt cgagcagttg
      241 tttgcgctcg ctggggtcca gcggcgcctg tgccgccgcc accacctgtt cgccgcaacc
      301 ggccagttgc cgccacagcg ccgtgccgtc ggcggtcagc tcgatgcgca gcgcgcggcg
      361 atcctgttcg tgcgggcagc ggcgcaggta gccgcggtgt tcgagctggt cgagctggcg
      421 ggtcatcgcg ccacaatcga cgtcgaccgc gcgcgccagt tcggtggcgc gcatcggccc
      481 caggcgggtc agccgttcaa ggatcaggaa ctgggtgaaa cgcagctcca ggcccttggc
      541 ggcgatctgg gcctcgatcg catgcaccag ctcgctgcgc acggcgccaa gcagggcgcc
      601 gaggctgtcg gggcggcaaa gagtgggggc ggagggcatc acggccgcgc attcttgtcg
      661 ccggcaaact atttgtcaag gcaaatatga atgccttagt tattgacggt gcaagaatct
      721 gcgcacggcc agtgccaccg ccgtgtgcaa ggtgccacgc gacctccatg acgccatgcg
      781 gcgcggaggc gagcagccat ccgcgcggcg gcaaaccggc acaataggca ttccgctctc
      841 gctggatgcc gtcgtgaatc tcgggccgtt cgcgttttcc accgccgtgc tggcgctgct
      901 gttcgggttc gtcgccgcgc agggggcggc gtgtttcctg cgcaagcgcg gccagcccga
      961 cgccagcaac gcgatctact gggccatggg cggtgcgctg ctgctcgcgc gcaccgcgta
     1021 cgtgatcggc tggcggcacc agtatttcga gcgcccgctc agcgtgctca acatccgcga
     1081 tggtggcttc gacctcattg ccggcctgat cggcctgtgc gtggtgaccg ccgtgatcgc
     1141 ctggcggcgc ccggcgctgc gcaaggcgct ggccggtgcc accgtggtcg gcatcgtcgc
     1201 gtggggcatg gccttgctca ccgcccgtgc gctgcacgcc tcgatgcagc agccgctgcc
     1261 gaccacggcg ctgcaggacg tggatggccg gacggtcacg ctcgcggggt tcgccggcaa
     1321 gccgctggtg ctgaacctgt gggcgacgtg gtgcggcccg tgccgcagcg agatgccgat
     1381 gctggtcgcg gcgcagcgca ccacacccgg cgtgcagttc gtgttcgtcg accagggcga
     1441 ggaccgtgcg caggtcgccg atttcctgtg gcgcgagggc ctcgcgccac agcacgtgct
     1501 gatcgacgcg aacctggatc tggccgccta ctatggcgtg cgcggctacc cgacgaccct
     1561 gttcatcggc cgcgacggcg tggtgcgcga tcgccagatg ggcgagcttt ccgccgccac
     1621 gctcgccgac cacctgcgcc ggattgcgcc gggagacgcg cgccgggagt agggccgggt
     1681 gtgcggcgcc cgtcgcgccg gaagcggcag gacgggcacg tggttcgcat gggagcggcg
     1741 aggggcgggc ggcctgcgga cgcaagcctc cccccaggca tggatcactc cacgcgccgc
     1801 ttcacccagg tgtcgaacaa ttcgtcgatg cggcggtatt cgtcgtacca cgcgtcggcg
     1861 tggacgaagc cgtggcgttc gagcgggtag agcgagatcc agaagttttt cttgtgcagc
     1921 tcgacgaagc gctggtacag gcggatcgag tcggcggtga gcacgttgtc gtcgatcagg
     1981 ccgtgttcga tcagcagcgg gtcgcgcagg ttctgcgcgt actcgatcgg cgagctggcc
     2041 ttgtacgcct cgggatcgag ctgcgggtcg ttgaggatgt tcgaggtgta ctcgtggttg
     2101 taggtgaccc agtccgccgg cggacgcagc gcggcgcccg ccgcgaactg gcccggcgcg
     2161 cgcagcagcg ccatctcggt catgaagccg ccgtagctgc cgccgtagat gcccacgcgg
     2221 cgcggatcga cgc
//
LOCUS       DASSVL010000500         3841 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_194861, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000500 DASSVL010000000
VERSION     DASSVL010000500.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3841)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3841)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3841
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_194861"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..358)
                     /locus_tag="VFM52_08760"
     CDS             complement(<1..358)
                     /locus_tag="VFM52_08760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007507357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 65 protein"
                     /protein_id="HET8765296.1"
                     /translation="MKPARLIPLLLALAAMPALAATDPSFLFTATSADFGSYFPGYLA
                     NGYFSTMTSPRGTEPDRAYMDYTPGDISRPAAIPGWSEIDYDPGHGVWMNSTRLAPTI
                     FADYRQTLDMHDATLTT"
     gene            complement(368..1636)
                     /locus_tag="VFM52_08765"
     CDS             complement(368..1636)
                     /locus_tag="VFM52_08765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008439365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HET8765297.1"
                     /translation="MNRFRIIAALALIYMIFAILLNSVGTVILQSIASFGIGDIAASA
                     LERYKDLTIAVVSFVVASFLPMLGYRRSMMVSLALVGTACAAMAGWPSFALTKLLFMC
                     IGIGFAMAKVAVYATIGLVTANRTAHSRLTSSIEGMFMVGMLSGQWLFAAWVDRQQPG
                     DLVWTHVYWLMAALCVLVIALLASSQLDESAAHAGHTNDSMADALREMARLFVRPLVY
                     VFLLSAFLYVLIEQSFTTWLPTFNNEVLKLPNAMSIQFASILAGSMALGRLCAGYVLK
                     RVPWYALLNACVLATAALVLLVLPMARHVVHQPDVGWLTAPAAAYLVPMIGLFLSPIY
                     PVINSIALSSLPKPMHAAMTGLIVAFSALGGTLGSLLTAIVFHHFDGIHAFYFSLLPM
                     GLVLVTLHFFHRETLRAGAGIRPAIGLAGK"
     gene            complement(1771..>3841)
                     /locus_tag="VFM52_08770"
     CDS             complement(1771..>3841)
                     /locus_tag="VFM52_08770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015446881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HET8765298.1"
                     /translation="DHVEILQGGPSVVFGDGQIGLTSNYILKQGTDTPSGSIGVTYGS
                     ENLKRIDGFYGFPIGRNGWYGSVGGFYRDSNGVRNPQFAADKGGQLTATLTKDWDNGS
                     LVFWARGLDDKNQFITPIPLIQTGQGTFSEYPGFDPLTGTYYSKAMQHTYLESYPGGG
                     TSVNLADGRGAQLGFFGVNFDWDFGNGWTVSDKFLVDGGNMDTNALFSGANPQTLASW
                     ENTAGTYPDNTVPAGAVYTAAYTNGTGTITDPGLGVISQGLWHIHKNLKSAINDFRVS
                     RELFDGNTLTAGVYLAHYTDNDRWSLGNPMLMTNTPNATPIAVSYVQGGQTYDVTNGQ
                     GLIYNGGYNITENGTATNKAFYLSDTWKLDQWILDASGRVENENARNTVCNLSSVNID
                     GNPNTLYDNAVSMCNGTYAVTTYNKTHPSWTVGATYKLSDNMAVYARANKGAHFNSFD
                     DLRGNTTGNTPPLLKIQNFEVGYKYSANWLSADISYYHRQFNGLSYQPSILGVPIGGF
                     STYGSDTRGINFIVKATTPDQLFSITASGDWMDGHYTHFQGDAVFFGLPTTGNPTGEF
                     VSTYEGKQLQRQPKFQVRVTPSLHFTMPYGDLLLWTTMEYVGPHTQDQLALQQLGSYT
                     DFNIGAQYTYDKHWVFTLLGSNVTDTLGLTESNSRIAGNATDATGVLLARTLEGHQYS
                     FQVKYKF"
BASE COUNT          632 a         1152 c         1383 g          674 t
ORIGIN      
        1 gggtggtgag tgtcgcgtcg tgcatgtcca gcgtctggcg gtaatccgcg aagatcgtcg
       61 gggcgagccg ggtcgagttc atccacacgc cgtggccggg gtcgtagtcg atctcgctcc
      121 agccgggaat cgccgccggg cgcgagatat cgcccggcgt gtagtccatg tacgcgcgat
      181 ccggctcggt gccgcgtggc gaggtcatcg tggagaagta gccgttcgcc aggtagccgg
      241 ggaaatagct gccgaaatcc gcgctggtgg cggtgaacag gaagctcggg tcggtggcgg
      301 ccagcgccgg catggccgcc agcgccagca gcagggggat gaggcgtgcg ggtttcatgc
      361 ggtgctccta tttgccggcc agcccgatgg cgggccggat gccggcgccc gcgcgcaggg
      421 tctcgcggtg gaagaagtgc agcgtcacca gcaccagccc catcggcagc agtgagaaat
      481 agaacgcgtg gatgccgtcg aagtggtgga acacgatggc ggtgagcaac gagccaagcg
      541 tgccgccgag cgcggagaac gccacgatca ggccggtcat cgccgcgtgc atcggcttgg
      601 gcagcgagga cagggcgatc gagttgatga ccggatagat cggcgagagg aacagcccga
      661 tcatcggcac caggtatgcg gccgccggcg cggtgagcca gcccacgtcg ggctgatgca
      721 ccacgtggcg tgccatcggc agtaccagca gcaccagcgc ggcggtcgcc agcacgcacg
      781 cgttgagcag cgcataccac ggcacgcgct tgagcacgta gccggcgcac aggcgtccca
      841 gcgccatgct gccagcgagg atgctggcga actggatgct catcgcgttg ggcagcttga
      901 gcacctcgtt gttgaaggtg ggcagccagg tggtgaagct ctgctcgatc agcacgtaga
      961 ggaaggcgct gagcaggaac acgtatacca gcgggcgcac gaacagccgc gccatttccc
     1021 gcagcgcatc ggccatcgaa tcgttcgtgt ggccggcgtg cgcggcgctc tcgtcgagct
     1081 ggctgctggc cagcagtgcg atcaccagca cgcacagcgc ggccatcagc cagtacacgt
     1141 gcgtccacac caggtcaccc ggctgctggc ggtcgaccca ggcggcaaac agccactgcc
     1201 cggacagcat gcccaccatg aacatgccct cgatgctgct ggtgaggcgt gagtgcgcgg
     1261 tgcggttggc ggtgaccagg ccgatggtgg cgtacaccgc caccttggcc atcgcgaagc
     1321 cgatgccgat gcacatgaaa aggagcttgg tgagtgcgaa cgacggccaa cccgccatcg
     1381 ccgcgcacgc ggtgccgacc agcgccagcg acaccatcat cgagcgccgg tagcccagca
     1441 tcggcaggaa cgaggccacc acgaaggaaa ccaccgcgat ggtgagatcc ttgtagcgtt
     1501 ccagcgccga ggcggcgatg tcgccgatgc cgaagctcgc gatcgattgc aggatcaccg
     1561 tgcccacgct gttgagcagg atcgcgaaga tcatgtagat caacgccagc gcggcaatga
     1621 tgcggaaccg gttcatgcgc acctcgtgct gcgaaaaagc ggcccgggcc accggggcac
     1681 cgtccgggcc gtcggggagt caagcaacgc cgccgcccgt gcctgccgcc gttcccgcaa
     1741 gcgggcggca ggcacgggtt caagcccgca tcagaacttg tacttcacct ggaacgagta
     1801 ctggtggcct tccagcgtgc gcgccagcag cacgccggtc gcgtcggtgg cgttgcccgc
     1861 gatgcgcgag ttcgactcgg tcaggcccag cgtgtcggtg acgttggagc ccagcagggt
     1921 gaacacccag tgcttgtcgt aggtgtattg cgcgccgatg ttgaagtcgg tgtagctgcc
     1981 cagctgctgc agcgcaagct ggtcctgcgt gtgcgggccg acgtactcca tcgtggtcca
     2041 cagcaacagg tcgccgtacg gcatggtgaa gtgcagggac ggcgtgacgc gcacctggaa
     2101 cttcggttgc cgctgcagct gcttgccctc gtaagtgctg acgaactccc cggtgggatt
     2161 gcccgtcgtc ggcaggccga agaacacggc gtcgccctgg aagtgcgtgt agtggccgtc
     2221 catccagtcg ccggaggcgg tgatcgagaa cagctggtcg ggcgtggtgg ccttcacgat
     2281 gaagttgatg ccccgggtgt ccgagccata agtggagaag ccgccgatcg gcacgcccag
     2341 gatcgacggc tggtaggaca ggccgttgaa ctggcggtgg tagtacgaga tgtcggcgct
     2401 gagccagttg gccgaatact tgtagccgac ctcgaagttc tggatcttca gcagcggcgg
     2461 cgtgttgccg gtggtgttgc cgcgcaggtc gtcgaagctg ttgaagtgcg cgcccttgtt
     2521 ggcgcgggcg tacacggcca tgttgtcgct gagcttgtag gtggcgccca ccgtccacga
     2581 gggatgggtc ttgttgtagg tggtgaccgc gtaggtgccg ttgcacatcg acaccgcgtt
     2641 gtcgtacagc gtgttggggt tgccgtcgat gttcacgctg gacaggttgc acacggtgtt
     2701 gcgcgcgttc tcgttctcca cccgccccga ggcgtcgagg atccactggt cgagcttcca
     2761 ggtgtcggac aggtagaacg ccttgttggt ggcggtgccg ttctcggtga tgttgtagcc
     2821 gccgttgtag atcaggccct ggccgttggt gacgtcatag gtctggccgc cctgcacgta
     2881 gctcaccgcg atcggcgtgg cattcggcgt gttggtcatc agcatcgggt tgccgagcga
     2941 ccagcgatcg ttgtcggtgt agtgcgccag gtacacgccc gcggtcagcg tgttgccgtc
     3001 gaacagttcc cggctgacgc ggaagtcgtt gatcgcgctc ttcaggttct tgtggatgtg
     3061 ccacagcccc tggctgatga cgccgaggcc gggatcggtg atggtgccgg tgccgttggt
     3121 gtaggcggcg gtgtacacgg ccccggcggg gacagtgttg tccggatagg tgccggcggt
     3181 gttctcccac gaagcgagcg tctgtggatt ggcgccggag aacagcgcgt tggtgtccat
     3241 gttgccgccg tcgaccagga acttgtcgct gacggtccag ccgttgccga agtcccagtc
     3301 gaagttgacg ccgaagaagc cgagctgggc gccgcggccg tcggcgaggt tcacgctggt
     3361 gccgccgccg gggtagctct ccaggtaggt gtgctgcatc gccttgctgt agtaggtgcc
     3421 ggtcagcggg tcgaagcccg gatactcgga gaaggtgccc tggccggtct ggatcagcgg
     3481 gatcggggtg atgaactggt tcttgtcgtc gaggccgcgc gcccagaaca ccagcgagcc
     3541 gttgtcccag tccttggtca gcgtggcggt gagctggccg cccttgtcgg cggcgaactg
     3601 cgggttgcgc acgccgttgg agtcgcgata gaagccgccc acgctgccgt accagccgtt
     3661 cctgccgatc gggaagccgt agaagccgtc gatgcgcttg aggttttccg agccgtaggt
     3721 gacgccgatg ctgccggagg gcgtgtcggt gccctgcttg aggatgtagt tggaggtgag
     3781 gccgatctgg ccgtcgccga acaccaccga cgggccgccc tgcaggattt ccacgtggtc
     3841 g
//
LOCUS       DASSVL010000501         2394 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_915368, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000501 DASSVL010000000
VERSION     DASSVL010000501.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2394)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2394)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2394
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_915368"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1030
                     /locus_tag="VFM52_08775"
     CDS             <1..1030
                     /locus_tag="VFM52_08775"
                     /inference="COORDINATES: protein motif:HMM:NF040105.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="MoxR family ATPase"
                     /protein_id="HET8765299.1"
                     /translation="YCHAGGNRPDRPPPRRGTLDSMVKNVQEPAERVVANVERVIIGK
                     HVEVRMALVALLCEGHILIEDVPGVGKTMLAKALSRSIGCTFRRIQFTPDRLPSDVTG
                     LSIFNQKTQEFEFRPGPIMAQVVLADEINRATPKTQSALLECMEERQATIDGVTHPMP
                     EPFMVIATQHPIESEGTFALPEAQLDRFMLRLRMGYPKAVEEIVILDEQKRLHPIDDL
                     RQVLDLEELRQMQSAIKEIYVDQTVADYIVRLVGATRDHPDVYLGASPRGSINLYRSG
                     QALAALEGRDYVIPDDIKQLAVAVLAHRLIIKSQASLREIDPDAIVREILGQVPIGES
                     TGAAASTV"
     gene            1055..2323
                     /locus_tag="VFM52_08780"
     CDS             1055..2323
                     /locus_tag="VFM52_08780"
                     /inference="COORDINATES: protein motif:HMM:NF013998.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF58 domain-containing protein"
                     /protein_id="HET8765300.1"
                     /translation="MGSLGRQLRFVFLGTVLVVAAFSTGIPFLFFLVYLLGGLLIASW
                     LYARRGLLGLRAGYHVLNPRAQVGDVLQAVYRIDNRSSWSKPWVELWNDSTLPAPLPG
                     RAIGVQARGSRQWLAKVTLMRRGSYRLGALRVRTGDPFGLFTSEMVVGQPTWVVVFPK
                     VEPLPHWRLPPSPVDGTSPSRQRFEAASPLVSSVRPYVRGDAINRIHWLTSIRHGELH
                     VKEFDLEQTADLWMVLDLDRTAHAGVGDSASVETAVTAAASIAVRTLGENRAVGLTVS
                     SRRQHVLTPDRGTRVEQKILHLLANVQADGTRPLAEVLVSTLPQLRRGMTLCLITGST
                     DREWVRALASLRRRGVGTVAVLLDRASFAQRPEEQDGAELAAVRHALAEYDIGYHLVA
                     AGDSLPEALGGRLAGRRARIRAASREELNA"
BASE COUNT          359 a          841 c          817 g          377 t
ORIGIN      
        1 gtattgtcat gcgggaggca atcgacccga ccgacctccg cccagacgag gaacccttga
       61 ttccatggtg aagaacgtcc aggagccggc ggagcgcgtc gtcgccaacg tggagcgcgt
      121 gatcatcggc aagcacgtcg aggtccgcat ggccctggtg gccctgctgt gcgagggcca
      181 catcctgatc gaggatgtgc ccggcgtcgg caagacgatg cttgccaagg ccctgtcgcg
      241 cagcatcggc tgcaccttcc ggcgcatcca gttcaccccg gaccggctgc cttcggacgt
      301 caccggcctg tcgatcttca accagaagac gcaggaattc gagtttcgcc cggggccgat
      361 catggcgcag gtcgtcctgg ccgacgagat caaccgcgcg acgccaaaga cccagtccgc
      421 gctgctcgag tgcatggagg agcggcaggc caccatcgat ggcgtgacgc accccatgcc
      481 ggagccgttc atggtgatcg ccacgcagca cccgatcgag tccgagggca ccttcgcgtt
      541 gccggaggcg cagctcgatc ggttcatgct ccgcctccgg atgggctacc caaaggcggt
      601 ggaggagatc gtcatcctgg acgagcagaa gcgcctgcac ccgatcgacg atctgcgcca
      661 ggtcctggac ctggaagagc tgcgccagat gcagtccgcc atcaaggaga tctacgtcga
      721 ccagaccgtg gccgactaca tcgtgcggct ggtgggagcc acgcgcgacc atccagacgt
      781 ctacctgggc gcctcgccgc gcggctccat caacctctac cgctccggcc aggcgctcgc
      841 cgcgctggag ggccgtgact acgtgattcc ggacgacatc aagcagcttg cggtcgcggt
      901 gctggcccat cggctgatca tcaagagcca ggcgtcgctg cgcgagatcg acccggacgc
      961 catcgtgcgc gagatcctgg gccaggtgcc catcggcgag tcaaccggcg ccgccgcgag
     1021 caccgtctag ccaatccctg cgagagagcc tgccatgggc agcctggggc gccagctccg
     1081 attcgtcttc cttggcacgg tgctggtggt tgctgccttc agcacgggca tcccgttcct
     1141 cttcttcctg gtgtacctgc tgggtggcct gctgatcgcc tcgtggcttt acgcgcggcg
     1201 cggcctgctg gggctgcgcg ccggctacca cgtcctgaat ccgcgagccc aggtcggcga
     1261 tgtgctgcag gccgtctacc gcatcgacaa ccgcagctcc tggagcaagc cgtgggtcga
     1321 gctgtggaac gactccaccc tgccggcgcc gctgcccggg cgcgcgatcg gcgtccaggc
     1381 gcgcggcagc cggcaatggc tggccaaggt cacgctgatg cgccgtggct cgtaccgcct
     1441 cggtgcgctg cgcgtccgga ccggcgaccc gttcggcctc ttcaccagcg agatggtggt
     1501 gggccagccg acctgggtgg tcgtcttccc caaggtcgag ccgctcccgc actggcgcct
     1561 gccaccgtcg ccggtggatg gcacctcgcc gtcgcgccag cggttcgaag ccgccagccc
     1621 gctggtcagc agcgtgcgtc cgtacgtgcg cggcgatgcc atcaaccgta tccactggct
     1681 gaccagcatc cgccacggtg agctccacgt gaaggagttc gacctcgagc agacggccga
     1741 cctgtggatg gtgctggacc tcgaccgaac cgcgcacgcc ggcgtgggcg acagtgcgtc
     1801 ggtcgagacc gccgtgacgg ccgccgcgtc gatcgcggtt cggacgctgg gtgagaaccg
     1861 cgcggtgggt ctcaccgtct cctcgcgccg tcagcacgtg ctcaccccgg accgcggcac
     1921 acgggtggag cagaagatcc tgcacctcct ggcgaacgtg caggccgatg gcacccgccc
     1981 gctcgccgag gtgctggtct ccaccctgcc gcagctgcgg cgcggcatga cgctgtgcct
     2041 tatcaccgga tccacggatc gcgagtgggt gcgcgcgctg gcatccctgc gtcgacgtgg
     2101 agtcgggacg gtggcggtgc tgctcgaccg ggccagcttc gcgcagcgcc ccgaggagca
     2161 ggacggcgcg gagcttgccg ccgtgcgcca cgccctggcc gagtacgaca tcggctatca
     2221 cctggtggca gccggcgaca gcctgcccga ggccctgggc ggcaggctgg cgggtcgccg
     2281 cgcgcgcatc cgcgccgcaa gccgggagga gctcaatgcc tgactggctg cgccgctacg
     2341 tccagccgcg cgagggctgg ctggctgccg cgctgctgat ggtgatgctc atga
//
LOCUS       DASSVL010000502         6234 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_590635, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000502 DASSVL010000000
VERSION     DASSVL010000502.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 6234)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6234)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6234
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_590635"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(57..761)
                     /gene="queC"
                     /locus_tag="VFM52_08785"
     CDS             complement(57..761)
                     /gene="queC"
                     /locus_tag="VFM52_08785"
                     /EC_number="6.3.4.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008436878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008616 - queuosine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="7-cyano-7-deazaguanine synthase QueC"
                     /protein_id="HET8765301.1"
                     /translation="MTETSRRKAVILVSGGMDSAVTTAIAREQGYAVHALSVAYGQRH
                     DSELAASERVARMLGAVEHKVVHVDLRTIGGSALTADIAVPLDETAAHDDAHIPVTYV
                     PARNTIMLSIALGWAETLGANDLFCGVNAVDYSGYPDCRPAFIEAFARLANLATKAGV
                     EGRTLHVHAPLVELSKADIVREGMRLGVDFSATVSCYRADAAGRACGHCDACVLRARG
                     FADAGVADPTHYVPSA"
     gene            complement(861..1544)
                     /gene="queE"
                     /locus_tag="VFM52_08790"
     CDS             complement(861..1544)
                     /gene="queE"
                     /locus_tag="VFM52_08790"
                     /EC_number="4.3.99.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007808420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="7-carboxy-7-deazaguanine synthase QueE"
                     /protein_id="HET8765302.1"
                     /translation="MASESTPAEATAPVAERLRITEIFLSIQGEADAAGWPTVFVRLT
                     GCPLRCVWCDTEYAFHGGQWHDIDEIVAEVARQGVRHVCVTGGEPLAQKRCPILLRKL
                     CDAGYEVSLETSGSIDVSTVDPRVHKVMDLKAPGSGECKRNLWSNLDHLLPHDQVKVV
                     VADRADYDWAWARVMEHRIHERCMVLFSPVAGKLAPRELAEWILADRLPVRFQMQLHK
                     VLWGNVPGK"
     gene            complement(1552..2388)
                     /gene="ybgF"
                     /locus_tag="VFM52_08795"
     CDS             complement(1552..2388)
                     /gene="ybgF"
                     /locus_tag="VFM52_08795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014404203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tol-pal system protein YbgF"
                     /protein_id="HET8765303.1"
                     /translation="MAGAIASAMLFVAPAFAQNSRLSLADRVAQLEQRAQNKDQSSAQ
                     MVNQLQQMESQLRDMQGQIEELQHQLQDLQGKTKDQYVDLDSRLGRLEAASQSGGAPA
                     AAGSAAGAANAQVSGGTPQGATGAAAAAAPAKAAPAKAAPAKPQSAASSAASQAAYDA
                     AFKTLRGGDYVGASRQFREFIEKHPDSPLVSNAFYWLGESYYVTTNYQVAQEAFQHLL
                     SQYPQSEKASDALLKLGYCQYELKQVAAAKATLKSVISKYPNSKAANLAKERLRRIES
                     AG"
     gene            complement(2431..2940)
                     /gene="pal"
                     /locus_tag="VFM52_08800"
     CDS             complement(2431..2940)
                     /gene="pal"
                     /locus_tag="VFM52_08800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010344309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan-associated lipoprotein Pal"
                     /protein_id="HET8765304.1"
                     /translation="MNKTVRVALVALLCVGAAACSKKQQVKPQAPAAEPAPAAAPAET
                     SGKYTPADLNTDPCLRQRVVYFDFDKSEIKPEFQQIMACHAKYLQDRPQAQMRLEGNT
                     DERGSKEYNLGLGERRGNAVSSALQANGASASQVSVISYGKEKPVCREHNEECWSKNR
                     RVDIVYTAE"
     gene            complement(3188..4513)
                     /gene="tolB"
                     /locus_tag="VFM52_08805"
     CDS             complement(3188..4513)
                     /gene="tolB"
                     /locus_tag="VFM52_08805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007507306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Tol-Pal system beta propeller repeat protein
                     TolB"
                     /protein_id="HET8765305.1"
                     /translation="MRKSSSIVASILLFVAALFAGPVLAQSSGGLDIQIVGGVKTATP
                     IAVVPFATQGMAPLPTDVADVIRNDLNRCGQFRALAKSDIVEFPSKGSDINFSTWRLL
                     KQDFIAVGNISDAGGGMLKVSYELWDVNKQQNLLAAYFTAPAGDLRGVAHQIADAIYQ
                     KITGVRGAFWTRIAYITQVGLGDNMTYSLVVADSDGFNPQVVARSHESLMSPAWSPDG
                     KKIAYVSFESGNSQIYVQDLTTGARQLVASHPKGINGAPAWAPDGRRLAVALSFSGHL
                     ELYQLDLGSRHETQITHSPSINTEPVWSPDGGSIYFTSDRSGRAQIYRTAASGGGAQR
                     VSFQGQSNSNSTLSYDGKKLAMVQGNGNVFRIAIMDLGLGGQVHFLSPGPLDFGPSWA
                     PNASMLLYGATEGPRGVLYATSADGMVRQRLALANGSVSDPSWGPYRQK"
     gene            complement(4519..5463)
                     /locus_tag="VFM52_08810"
     CDS             complement(4519..5463)
                     /locus_tag="VFM52_08810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015446901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell envelope integrity protein TolA"
                     /protein_id="HET8765306.1"
                     /translation="MDESKGTPRAVVLSALLHLGIVAFLFLATISCASYETFFDALHL
                     PSWMNPITCSRPLQLQGPVIEATLIGPTGSPPPKAQKAKPVPDSVPPPPAVPPPPPPP
                     EAKPKVEPLPPPPKHPDVKDQEKVVEEGLQQAEEKKVQDEKQRQRQADLDAQAAQKKK
                     DELKKIDELFAKMDAAQAQTKKLDNKAKQAKQQLADLKNAQDDGQANLPYAAQRQTGN
                     NANSTSLADAYAAAIQNAVTPNWLRPDNMPHAPCKVHIVQLPGGDVMSATVDPSCPYD
                     DAGRRSVENAILRTKTLPYKGFESVFQRKLTFTFMPQS"
     gene            complement(5450..5908)
                     /gene="tolR"
                     /locus_tag="VFM52_08815"
     CDS             complement(5450..5908)
                     /gene="tolR"
                     /locus_tag="VFM52_08815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007080166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0098567 - periplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_function: GO:0015078 - proton transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0061024 - membrane organization [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein TolR"
                     /protein_id="HET8765307.1"
                     /translation="MPIARRHKRYKLKAEINVVPYIDVMLVLLIIFMVTTPMMNSNVD
                     VNLPQADAKALHGKKDSLVVQVAKDGSLSLIMGNGKPQATDEADMQAKVKAFMDANPQ
                     LSVLVAGDTAGNYGGVYKVLADLQQAGVDKVGLMSTPGDAGAGQSAHGRK"
     gene            complement(5922..>6234)
                     /locus_tag="VFM52_08820"
     CDS             complement(5922..>6234)
                     /locus_tag="VFM52_08820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007808409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="MotA/TolQ/ExbB proton channel family protein"
                     /protein_id="HET8765308.1"
                     /translation="RNLEFLANVGSISPYVGLFGTVWGIMGAFQGLGDMKDVTIAVVA
                     PHISEALIATAMGLFAAIPAQWAYNRYATKVERIASKYEVFQEEFSSVLQRQVQADDA
                     A"
BASE COUNT         1020 a         2001 c         2063 g         1150 t
ORIGIN      
        1 gggaaagtcg cggcgaatcg tcgaaacgcg cgccgcgagc cgcgcattct aacgtgtcac
       61 gccgacggaa cgtagtgcgt gggatcggca acacctgcat ccgcaaaccc gcgtgcgcgc
      121 agcacgcagg catcgcagtg cccgcaggcg cgaccggcgg cgtcggcgcg atagcacgac
      181 acggttgccg agaagtcgac gccgagacgc atgccttcgc gcacgatgtc ggctttcgac
      241 aactcgacca gcggtgcgtg cacgtgcagc gtgcggccct cgacacccgc cttggtagcg
      301 aggttggcga gccgcgcgaa ggcttcgatg aaggcgggcc ggcaatccgg gtagcccgag
      361 taatcgactg cattgacgcc gcagaagaga tcgttggcgc ccagcgtttc cgcccagccc
      421 agcgcgatcg acagcatgat ggtgttgcgt gccggcacgt aggtcaccgg gatgtgcgcg
      481 tcgtcgtgcg cggcggtttc gtcgagcggc acggcaatgt cggcggtgag cgcggagccg
      541 ccgatggtgc gcaaatccac atgcaccacc ttgtgttcga ccgcgcccag catgcgcgcg
      601 acgcgctcgg aggcggccag ctcggagtcg tggcgctggc cataggcgac gcttagcgcg
      661 tgcacggcat agccctgttc acgggcaatc gcggtggtga cggccgaatc catgccgccg
      721 gagacgagga tgacggcctt gcgccgggag gtttcagtca ttgccggagt ccatcgaaag
      781 cggccggtca ccggccgaaa cacgccgacg gcgacacagg ccgcagcgcg gaaaccaggt
      841 ggcggccgcc gccggcaagt tcatttgccg ggtacgttgc cccacagcac cttgtgcagc
      901 tgcatctgga agcgcaccgg caagcggtcg gcgaggatcc actcggccag ctcacgcggc
      961 gccagcttgc cggccactgg cgagaacagc accatgcagc gttcgtggat gcgatgctcc
     1021 atcacccgcg cccacgccca atcgtagtcg gcacgatcgg caaccacgac cttcacctgg
     1081 tcgtgcggca gcaggtgatc gaggttcgac cacaggttgc gcttgcattc gcctgagccc
     1141 ggcgccttga ggtccatcac cttgtgcacg cgtggatcga ccgtcgacac gtcgatcgag
     1201 ccggaggttt ccagcgaaac ctcgtaaccc gcatcgcaca gcttgcgcag caggatcggg
     1261 cagcgcttct gcgccagcgg ctcgccgccg gtcacgcaca catgacgcac gccttggcgc
     1321 gcgacctcgg cgacgatctc gtcgatgtcg tgccattggc cgccgtggaa ggcgtattcg
     1381 gtgtcgcacc acacgcaacg cagcggacag ccggtcaggc ggacgaacac cgtcggccag
     1441 cctgccgcat cggcctcgcc ctggatcgac aggaagatct cggtgatgcg caggcgctcg
     1501 gcaacggggg cggtcgcctc ggcaggggtg gattcggacg ccatcaccgc ctcaacccgc
     1561 cgattcgatg cggcgcagcc gctccttcgc gaggttggcg gccttggagt tgggatactt
     1621 gctgatcacc gacttgagcg tcgccttggc ggccgcgacc tgcttcagct cgtactggca
     1681 ataacccagc ttgagcagcg cgtcggatgc cttctcactc tgcgggtact ggctcagcag
     1741 gtgctggaaa gcctcctgcg ccacctggta attggtggtg acgtagtacg actcgccgag
     1801 ccaatagaac gcgttggaca ccaatgggct gtccgggtgc ttctcgatga actcgcggaa
     1861 ttggcgcgaa gcgccgacgt aatcaccgcc gcgcagcgtc ttgaatgccg catcgtaggc
     1921 ggcctggctc gccgcgctgc tggctgccga ctgcggcttg gccggtgccg ctttcgccgg
     1981 cgctgccttc gccggagcgg cggcagcagc ggcgccggta gcgccttgtg gcgtaccgcc
     2041 cgatacctgc gcattggccg cgccggcggc actgccggcc gcggcaggcg caccaccgga
     2101 ctggcttgcg gcctcgagcc ggccaagccg ggaatcgagg tcgacgtatt gatccttggt
     2161 cttgccttgc agatcctgca actggtgctg cagctcttcg atctgcccct gcatgtcgcg
     2221 caattgcgat tccatctgct gcaactggtt gaccatctgc gcgctgctct ggtccttgtt
     2281 ctgcgcacgc tgctccaatt gggcaacgcg atcagccagg ctcaggcgcg agttctgcgc
     2341 aaatgccggc gccacgaaaa gcatggcgga cgcgattgcg cccgccatgc cgattctggc
     2401 tgccatgttg ctggccagaa gtttcaccac ttactcagcc gtgtagacga tgtcgacacg
     2461 acggttcttg ctccagcact cttcattgtg ctcgcggcaa accggctttt ccttgccgta
     2521 cgagatcacg ctgacctggc tggcggaagc gccattggcc tgcagcgcgc tggagacggc
     2581 attgccacga cgctcgccga ggccgaggtt gtattccttc gagccacgct cgtcggtgtt
     2641 gccttccagg cgcatctgcg cctgcgggcg atcctgcagg tatttcgcat ggcaagccat
     2701 gatctgctgg aactccggct tgatttccga cttgtcgaag tcgaagtaca cgacgcgctg
     2761 acgcaggcac ggatcggtgt tgaggtcggc aggcgtgtac ttgccgctgg tctcggcggg
     2821 agcggcggca ggagccggct cggcagccgg agcctgcggc ttgacttgct gcttcttgga
     2881 gcaggcggct gcgcccacgc aaagcagggc gaccagtgca acgcgaacgg tcttattcat
     2941 ggtgacgttc cttcaaacgt gtgagttccg gcatacagtg acggactggt tacgggacga
     3001 aatcgccggt gacccggctg ttgtttattt tgatattgca agatcaacgg cgtgtgatgc
     3061 gcacctccaa tggctgaccg tcacgccgtg aggcgttgcg gccggcaaaa cacgccgggc
     3121 gcgaccccgt ggatcgtccc cggccccggt cgtcgcacgt tcccgctatg tggcgacgac
     3181 cgaaaactca tttctgtcga tacggtcccc acgatggatc gctgacgctg ccatttgcca
     3241 gcgccagtcg ctgtcgcacc ataccgtccg cggacgtcgc atacaagacg ccgcgcgggc
     3301 cctcggtggc gccgtacagc agcatgctgg cattcggtgc ccaactcggg ccgaagtcca
     3361 gcgggcccgg cgacaggaag tgcacctggc cgcccaaccc cagatccatg atggcgatgc
     3421 ggaacacgtt gccgttgccc tgcaccatcg cgagtttctt gccgtcgtag ctgagggtgg
     3481 aattggaatt gctctggccc tggaagctca cccgctgggc gccgccgccg ctggctgcgg
     3541 tgcggtagat ctgcgcgcgg ccggaccggt ccgacgtgaa gtaaatcgag ccgccatccg
     3601 gcgaccacac cggttcggtg ttgatcgacg ggctgtgggt gatctgggtc tcgtggcgcg
     3661 agcccaggtc gagctgatac agctcaagat ggccggagaa cgacagcgcc acggcgagcc
     3721 ggcgcccatc cggtgcccat gccggtgcgc cattgatgcc cttggggtgc gacgccacca
     3781 gctggcgggc gccggtggtc aggtcctgca cgtagatctg cgagttgccg ctctcgaagg
     3841 agacataggc gatcttcttg ccgtccggcg accacgccgg cgacatcagc gactcgtgcg
     3901 aacgcgcgac gacctgcgga ttgaagccat cggaatcggc cacgaccagc gaataggtca
     3961 tgttgtcgcc gaggccgacc tgggtgatgt aggcgatgcg ggtccagaac gcaccgcgca
     4021 cgccggtgat cttctggtag atcgcgtcgg cgatctggtg ggccacaccg cgcaggtcac
     4081 cggccggtgc ggtgaaatac gctgccagca ggttctgctg cttgttgacg tcccacagct
     4141 cgtagctgac cttcagcatg ccgccgccgg catcgctgat gttgccgacc gcgatgaaat
     4201 cctgcttgag caggcgccag gtcgagaagt tgatgtcgct gcccttggac gggaactcga
     4261 cgatgtcgct cttggccagc gcgcggaact ggccgcagcg gttcaggtcg ttgcggatca
     4321 cgtcggcgac atcagtcggc aacggtgcca tgccctgtgt cgcgaacggc accaccgcga
     4381 tcggcgtggc ggtcttgacg ccaccgacga tctggatgtc caacccgcca gaagactggg
     4441 caagtaccgg gccggcgaac aaggcggcga cgaacagcag gatggaggcg acgatggaac
     4501 tcgacttgcg catgaaactc acgattgcgg catgaaggta aaagtcagct tgcgttggaa
     4561 gacgctctcg aaacccttgt acggcaaggt cttcgtgcgc aggatggcgt tctcgacgga
     4621 acgtcgaccg gcatcgtcgt acgggcaact gggatcgacc gtggcgctca tcacgtcacc
     4681 accgggcagt tgcacgatgt gcaccttgca cggcgcatgc ggcatgttat ccggccttaa
     4741 ccaatttggc gtgaccgcat tctgaatggc tgccgcgtag gcatcggcca gcgaggtgct
     4801 gttggcgttg ttgccggttt gacgttgcgc cgcgtacggc aggttggcct gcccgtcgtc
     4861 ttgcgcattc ttcaggtcgg caagctgttg cttggcctgt ttcgccttgt tgtcgagctt
     4921 cttggtctgc gcctgcgccg cgtccatctt cgcgaacagc tcgtcgatct tttttagctc
     4981 gtccttcttt ttctgtgcag cctgcgcatc caggtcggcc tgacgctggc gctgcttttc
     5041 gtcctggacc ttcttttcct cggcctgctg caagccttcc tcgacgacct tttcctgatc
     5101 cttgacgtcg gggtgcttcg gcggcggtgg cagcggctcg accttgggct tggcctcggg
     5161 cggcgggggc ggcggaggca ccgccggcgg cgggggcacg gaatcgggga ccggcttggc
     5221 cttctgtgcc ttcggcggcg ggctgccggt gggcccgatc agcgtggcct cgatcaccgg
     5281 gccctgcagc tgcagcgggc gcgagcaggt gatcgggttc atccacgacg gcaggtgcaa
     5341 ggcgtcgaaa aacgtctcgt agctcgcgca cgagatggtg gcgagaaaca ggaaggcgac
     5401 gatgcccagg tgcagcagcg cggagagcac taccgcccgc ggcgtgccct tactttcgtc
     5461 catgggcact ctgcccggca ccggcatcgc ccggggtgct catcaagccg accttgtcca
     5521 cgccggcctg ctgcagatcc gcgagcacct tgtacacgcc gccgtagttg ccggcggtgt
     5581 cgccggccac cagcacgctg agctgcgggt tggcatccat gaaggccttg accttggcct
     5641 gcatgtcggc ctcgtcggtc gcctgcggct tgccgttgcc catgatgagc gacagcgaac
     5701 catccttggc cacctgcacc accagcgagt ccttcttgcc atgcagcgcc ttggcgtcgg
     5761 cctgcggcag gttgacgtcg acgttggagt tcatcatcgg cgtggtgacc atgaagatga
     5821 tcagcagcac cagcatcacg tcgatgtagg gaacgacgtt gatctcggcc ttgagtttgt
     5881 agcgcttgtg gcgccgtgca atcggcatgt cagtgctccg gtcaggcggc gtcgtcggcc
     5941 tggacctggc gctgcagcac cgaggaaaac tcctcctgga acacctcgta cttggaggcg
     6001 atgcgctcca ccttggtggc gtagcggttg tacgcccact gcgccggaat ggccgcgaac
     6061 aggcccatcg cggtggcgat caacgcctcg gaaatgtgcg gcgcgaccac ggcgatggtg
     6121 acgtccttca tgtcgcccag gccctggaag gcgcccatga tgccccacac cgtgccgaac
     6181 aggccgacgt acgggctgat cgagccgacg ttggcgagaa actcgaggtt gcgt
//
LOCUS       DASSVL010000503         2672 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1240581,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000503 DASSVL010000000
VERSION     DASSVL010000503.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2672)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2672)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2672
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1240581"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(62..670)
                     /locus_tag="VFM52_08825"
     CDS             complement(62..670)
                     /locus_tag="VFM52_08825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008434760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HET8765309.1"
                     /translation="MQLFGKLYAHALTWARHPHALYYLSGLSFIEAFIFPVMPEVMLA
                     PMMLGKRHRAFFYANVSLVFSLLGALVGYALGHWAFAALRPLLDTLHVLAPIEQGVSN
                     LRTQMVEHPLGLFGVLIVAALQPVVPMKFVTWASGIIGVPVLPFLGCIALGRGKRVWL
                     LALLIRWFGERAERILRDYIEWIGWVALVVLGALLAWWVWRH"
     gene            complement(695..1390)
                     /locus_tag="VFM52_08830"
     CDS             complement(695..1390)
                     /locus_tag="VFM52_08830"
                     /EC_number="2.1.1.77"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008434758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004719 - protein-L-isoaspartate
                     (D-aspartate) O-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein-L-isoaspartate(D-aspartate)
                     O-methyltransferase"
                     /protein_id="HET8765310.1"
                     /translation="MNIHPLPPSALRGEGLTSQRARDRLAAQLQADGIRDPRVIDVIR
                     NTPRHHFIDQALHARAYENTALPIGQGQTISQPWVVARMTEALLEHFDARGEQPGSVL
                     EIGTGSGYQTVILAALMAQVYTVERIEELLRQARRRFRQLGLANIRSRYDDGKLGWAD
                     AAPFDAIILTAAGDTIPSRILEQLSPTGVLVAPVGSPSSQTLLRLRGDGKGDFTQEEL
                     GPVSFVPLLGGIG"
     gene            complement(1396..2184)
                     /gene="surE"
                     /locus_tag="VFM52_08835"
     CDS             complement(1396..2184)
                     /gene="surE"
                     /locus_tag="VFM52_08835"
                     /EC_number="3.1.3.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010341529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008252 - nucleotidase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5'/3'-nucleotidase SurE"
                     /protein_id="HET8765311.1"
                     /translation="MRVLVSNDDGVDAKGIRVLAERLAVLGEVIVVAPDRDRSGASNS
                     LTLDVPVRVSQLDDGRYRVAGTPTDCVHLALSGLLDKEPDIVVSGINNSANLGDDVIY
                     SGTVSAAMEGRFLGLPAIAISLVSSDHRGEHFESAAKAVLLLTRRLVVDPLPADTILN
                     VNVPDRPWDEIRGFEVTRLGRRHRAAPCIARTDPRGNPIWWIGPVGEVDDDGPGTDFN
                     AVRRGYVSVTPIHVDLTRFQALEKVSSWMQSLTADMATRAPRVA"
     gene            2404..>2672
                     /locus_tag="VFM52_08840"
     CDS             2404..>2672
                     /locus_tag="VFM52_08840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007511212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMR domain protein"
                     /protein_id="HET8765312.1"
                     /translation="MKRRAPAPVTDADARLFREAVGEVRRMATVATPHLAPRPAPRPR
                     MLEADEAAVPGELLDLNFDPATIEIGEELGYLHDGYPPKVLRALKR"
BASE COUNT          451 a          917 c          914 g          390 t
ORIGIN      
        1 gggcgattca tgcacgccag catagcgagg cgccagaggt ttttcatacc gaccgccatg
       61 ctcaatgtcg ccagacccac cacgccagga gcgcacccag tacaaccagc gctacccagc
      121 cgatccactc gatgtagtcg cgcaggatcc gctccgcgcg ctcgccgaac caacggatga
      181 gcagcgccag cagccacacg cgcttgccgc ggccaagcgc gatgcagccc aggaacggca
      241 gcaccggcac gccgatgatg cccgacgccc aagtgacgaa cttcatcggc accaccggtt
      301 gcagcgccgc cacgatcagc acgccgaaca ggcccagcgg atgctcgacc atctgcgtgc
      361 gcaggttgct gacgccctgc tcgatcggcg ccagcacgtg cagcgtatcc agcagcggcc
      421 gcagcgcggc aaacgcccaa tgcccgagcg catagccgac gagggcgcca agcagcgaga
      481 acaccaggct gacgttggca tagaagaagg cacgatgacg cttgcccagc atcatcggcg
      541 ccagcatcac ctccggcatc accggaaaaa tgaacgcctc gatgaagctc agtccgctta
      601 ggtaatacag ggcgtgcggg tggcgcgccc acgtgagcgc gtgcgcgtac aacttgccga
      661 acaactgcat gggacggggt ttcctgtggg tcgttcagcc gatgccgccg agcagcggca
      721 cgaagctcac tggcccgagt tcttcctggg tgaagtcgcc cttgccgtca ccgcgcaggc
      781 gcagcaacgt ctggctgctg ggcgaaccga ccggcgccac cagcacgccg gtcgggctga
      841 gctgttcgag gatgcggctg ggaatggtgt cgccggcggc ggtgaggatg atcgcgtcga
      901 acggggccgc atcggcccag ccgagcttgc cgtcgtcgta gcgcgagcgg atgttggcga
      961 gcccgagctg gcggaagcgg cggcgcgcct ggcgcaacag ctcctcgatc cgttcgaccg
     1021 tgtacacctg cgccatcagc gcggcgagga tcaccgtctg gtagcccgaa ccggtgccga
     1081 tctccagcac gctgccgggc tgctcgccac gcgcgtcgaa gtgttcgagc agcgcttcgg
     1141 tcatgcgcgc caccacccac ggctgggaga tggtctgccc ttgcccgatc ggcagcgcgg
     1201 tgttctcgta ggcacgcgca tgcaacgcct ggtcgatgaa gtgatggcgc ggcgtgttgc
     1261 ggatgacgtc gatgacgcgc ggatcgcgga tgccgtcggc ctgcaactgc gcggccagcc
     1321 gatcgcgcgc gcgctgcgag gtcaggcctt cgccccggag cgcggatggc ggcagcggat
     1381 ggatgttcat cgtcgtcatg cgacgcgggg cgcccgcgta gccatgtcgg cggtcaacga
     1441 ttgcatccag ctgctgacct tctccagcgc ctggaaccgc gtgaggtcga cgtggatcgg
     1501 tgtcaccgac acgtagccgc ggcgcaccgc attgaagtcc gtgccggggc catcgtcatc
     1561 gacctcgccc accgggccga tccaccagat cgggttgccg cgtgggtcgg tgcgcgcaat
     1621 gcacggcgcg gcgcggtggc ggcgcccgag ccgggtcacc tcgaagccgc ggatctcgtc
     1681 ccacgggcga tcgggcacat tgacgttgag gatggtgtcg gccggcaacg ggtcgaccac
     1741 caggcggcgg gtcagcagca gcaccgcctt ggcggccgac tcgaaatgct cgccgcgatg
     1801 gtcgctgctc accagcgaga tcgcgatcgc cggcagaccg aggaagcgcc cttccatcgc
     1861 ggccgacacg gtgcccgaat agatcacgtc gtcgccgagg ttggcggagt tgttgatgcc
     1921 cgacaccacg atgtcgggct ccttgtcgag caggcccgac aaggcgagat gcacgcagtc
     1981 cgtgggcgtg ccggccacgc ggtagcggcc gtcgtccagc tgggagacgc gtaccggcac
     2041 gtcgagcgtc aacgagttgc tggcgccgga tcgatcccga tcgggcgcga ccacgatgac
     2101 ttcgcccagc acggccagcc gctcggcaag cacgcggatg cccttcgcat ccactccgtc
     2161 gtcgttgctg accagtaccc gcatgttgct ccgctcgcat cgcgtgaccg cgccaccgtg
     2221 tagcgccgct gaatgcccga gtttaccgga gcatggcggt ggtttcacgg gcgggcggca
     2281 cgtactggcc gtgtgtcgcg gggccaagac ccggcccgag ggaggactca cctgctcgtg
     2341 gggcggagct ggtccgatgc ggcctagcgt gatttccatc caacgagcgc ctagcatcga
     2401 agcatgaaac gtcgcgcgcc cgctccggtg accgatgccg acgcccgcct gttccgcgag
     2461 gccgtcggcg aggtgcggcg catggcgacg gtcgcgacac cgcacctcgc gcccaggccc
     2521 gcgccgcgac cacgcatgct cgaggccgac gaggcggcag tgccgggcga gctgctcgac
     2581 ctgaacttcg acccggcgac gatcgagatc ggcgaggagc tgggctatct gcacgacggc
     2641 tatccgccca aggtgctgcg cgcgctgaag cg
//
LOCUS       DASSVL010000504         2090 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1014335,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000504 DASSVL010000000
VERSION     DASSVL010000504.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2090)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2090)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2090
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1014335"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1085
                     /locus_tag="VFM52_08845"
     CDS             <1..1085
                     /locus_tag="VFM52_08845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008215134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HET8765313.1"
                     /translation="RVAGGQLAFAPLEAWKVSLTAGQSKDLATTYFQGTDSGTYYPLT
                     PSGYSNSRRDQLGWQNDFTLGDGQLLTAGIDWQREHVASSTAYLQTSRRDTGAYAQYQ
                     GTFGRNDVQVSARRDHSSQFGSRDTGAIAFGHTWDGGVRAYASYGSAFHAPTFNDLYF
                     PPFFGIASANPQLKPETSRSAELGVKQQGDGWYWSADAYETRIRQLIVLDPARNYVPF
                     NLSRARIRGLEGEAGATLAGWDVKTTLTLQQPKNDDRGASDGNLLPRRPERMARVDLD
                     RRFGAFGIGTTLYAAGASYDDVANRHRLGGYGTVALRASWQFAPAWQLETRLANALDH
                     DYETAWYFVQPGRTVSLTLRYTPHAG"
     gene            1346..>2090
                     /locus_tag="VFM52_08850"
     CDS             1346..>2090
                     /locus_tag="VFM52_08850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015446456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HET8765314.1"
                     /translation="MNVFAPMIRRPIGTSLLAIGLALAGIWAYLLLGVAALPSIEFPG
                     VGVMATMPGASAQVMANTVLSPLERHLGRIPGVKEMYGSAAEGAVQIQVMFDMSRSAD
                     EAARDVQQAINAAQPDLPTGMVPPQYFKFDTSQIPILLITLTSSSMPPDKLYDLTQTM
                     LQPAVAQIPGVAQVGIGGGSPHAVRVALNNAALAHAGITSNDVANALRAANVTSPQGT
                     LSDGRTQMTVTANDGLRQPADFARLLIAVR"
BASE COUNT          329 a          761 c          706 g          294 t
ORIGIN      
        1 agcgcgtcgc cggcggccag ctcgccttcg cgccgctcga ggcgtggaag gtcagcctga
       61 ccgccgggca gagcaaggac ctcgccacca cgtatttcca gggcacggac agcggcacgt
      121 actacccgct cacccccagc gggtactcga actcgcgccg cgaccagctc ggctggcaga
      181 acgacttcac cctcggcgac ggccagctct tgaccgccgg catcgactgg cagcgcgagc
      241 atgtcgcgag cagcacggcg tacctgcaga cctcgcgccg cgacaccggc gcctacgcgc
      301 aataccaggg caccttcggc cgcaacgacg tgcaggtttc cgcgcggcgc gaccacagca
      361 gccagttcgg cagccgtgac accggcgcga tcgcgttcgg ccacacctgg gatggcggcg
      421 tgcgcgcgta tgccagctat ggcagcgcct tccatgcgcc gaccttcaac gacctgtatt
      481 tcccgccgtt cttcggcatc gcctcggcga acccgcagct caagccggaa acctcgcgca
      541 gcgccgagct gggcgtgaag cagcagggcg atggctggta ctggtcggcg gacgcgtatg
      601 aaacgcgcat ccgccagctg atcgtgctcg acccggcgcg caactacgtg ccgttcaacc
      661 tgtcgcgcgc gcgcatccgc ggactcgaag gcgaggccgg cgcgacgctg gccggctggg
      721 acgtgaaaac cacgctgacc ctgcagcagc cgaagaacga cgaccgtggc gccagcgacg
      781 gcaacctcct gccgcgccgc ccggaacgca tggcgcgcgt ggatctggat cgccgcttcg
      841 gcgcgttcgg catcggcacc acgctgtacg cggctggcgc gagctacgac gacgtggcga
      901 accggcaccg gctgggcggc tacggcaccg tcgcgctgcg cgcgagctgg cagttcgcgc
      961 cggcgtggca gctggagacg cgcctggcga atgcgctcga ccacgattac gaaaccgcgt
     1021 ggtacttcgt gcagccgggt cgcaccgtct cgctgaccct gcgctacacg ccgcacgccg
     1081 gctgatcggt gctgccgccc ggccgggaaa ggccgggcgg ttcgcgcggg cgccgtgccc
     1141 cattcgtcac cgtgccgttc ggcaggggcg gccgaacggc acattcgccg ccgcgcggac
     1201 gcgtgcataa aggcggcatg tacggggaag caccctacgc gacagacgac cggctgcggt
     1261 gtccgcgcca gcgtcctggc atccacgcaa cggccagccg gttgcgaggc gttctcccgc
     1321 tatgcttgcg cgccacggag gacgcatgaa cgtctttgct cccatgattc gccggccgat
     1381 cggtacctcg ctgctcgcca tcgggctggc gctcgccggc atctgggcgt atctgctgct
     1441 tggtgtcgcg gcgttgccgt cgatcgagtt tcccggcgtc ggcgtgatgg cgacgatgcc
     1501 gggcgcgagc gcacaggtga tggcgaatac cgtgctctcg ccgctggagc gccacctggg
     1561 ccgcatcccc ggggtcaagg aaatgtacgg ctcggcggcc gagggcgcgg tgcagatcca
     1621 ggtcatgttc gacatgagcc gcagcgccga cgaggcggca cgcgacgtgc agcaggcgat
     1681 caacgccgcg cagcccgacc tgcccaccgg catggtgccg ccgcagtact tcaagttcga
     1741 cacctcgcag atcccgatcc tgctgatcac gctgacctcg tccagcatgc cgccggacaa
     1801 gctctacgac ctgacccaga ccatgctgca gccggcggtc gcgcagattc ccggcgtcgc
     1861 ccaggtcggt atcggcggcg gctcgccgca tgcggtgcgc gtggcgttga acaacgccgc
     1921 gctggcgcac gccggcatca cctccaacga cgtcgccaat gccttgcgcg cggccaacgt
     1981 cacctcgccg cagggcacgc tgagcgacgg ccgcacgcaa atgacggtga ccgccaacga
     2041 cggcctgcgg cagccggccg atttcgcccg cctgctgatc gcggtgagga
//
LOCUS       DASSVL010000505         3636 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_265709, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000505 DASSVL010000000
VERSION     DASSVL010000505.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3636)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3636)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3636
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_265709"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..721)
                     /locus_tag="VFM52_08855"
     CDS             complement(<1..721)
                     /locus_tag="VFM52_08855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008433269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HET8765315.1"
                     /translation="MKSTLLVRTAVVAIAGLLLAACGGGGGDDEASGGADVAGVAQVT
                     TAMPQRRSFHDEVAAWGSAQADPHRARLISLAHGGEVTRLLVSAGQTVTRGQPLLAVA
                     PDPAARAAYQQAHSALTLATGELQRIEQLAAQHLATQSQVATVRKALADAQAEVAAQQ
                     ALGGGVPEETVTAPAAGVVTALSVQLGERFAANAPLLGFMPTSALIAALGVQPDTGAA
                     LHVGMPVQVRGVYGNAGTYAGR"
     gene            complement(718..2145)
                     /locus_tag="VFM52_08860"
     CDS             complement(718..2145)
                     /locus_tag="VFM52_08860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007508499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HET8765316.1"
                     /translation="MLHAMAYLSALRPIRVHAATAVRRGRCAVLGACVATCLGACATY
                     HPLPLGGNDFATRAAQLQAPASEMPVPELAAHRFDPADGLDVTEVAMLAVANSPDLKL
                     QRDALGIARAQAFDAGLLPDPQLGFGADFPHHAPSGSTRAYNLGLSADVSALLLRSSR
                     RRVADAQAEQVNLDLLWAEWQTIAQARLLFDQVQSLRAMTTLLDAEQRALTPVDAAVR
                     AALAAGNLSYDGASAGLNALADVRTRATDNAVALHQAESDLRQLLGLAPDAPLDLVGA
                     PYQVDPDAAQRAAALADLPRRRPDLLALQAGYRAQEARLRAAILAQFPAITLGFNRAR
                     DTSNVTTYGFSVGITLPLFNRNRGNIAIETATRQQLKDDYAARLLAAHSDVARLAADL
                     ATLDARRRTQAAHAQQLDAARTAAEKAWRAGLLDWPTYLAIRGNALAADTDAITLGQT
                     RSADAIALEALLGRTDFVIPRTSKR"
     gene            complement(2209..>3636)
                     /locus_tag="VFM52_08865"
     CDS             complement(2209..>3636)
                     /locus_tag="VFM52_08865"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009975 - cyclase activity [Evidence IEA];
                     GO_process: GO:0009966 - regulation of signal transduction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HET8765317.1"
                     /translation="RASASRLSQLGVMRRYTEAFELANRLAARLPQVADAKARYALLL
                     NLAQAMGLAGQTDLAVRYAQMAMTADPSPSNRCYAAGILVEVLFDGRRLKPDSLELQQ
                     AFDACPMATESLYNTGLTLNLASLYARGGQPHKALALLDRIQPRVDAAGYASDKLTAL
                     QVRAWALVALGKDDAARKTALAAVAAGPAIDFDQKDTYEVLYRVEKQRGNAAAALGYY
                     EKYAALDTAYLDDVNARALAYQVVQQRVLAQQLETARLAQQNTTLRMRRALDAKKAEA
                     ARRYALLLLVILALAVVAMLRLKRSQLRFKQLSRLDGLTGLLNRQHFVAEAEGALHEL
                     ERRRAPACMVFIDLDHFKRVNDTHGHAAGDEVLRRTVDASRQHLRPIDLFGRLGGEEF
                     GILLMGCTREQGVTIADRIRHAVEATSVALDGATIAVSTSAGLAFTDTCGYTLQRLFH
                     AADMGLYKAKRGGRNRVFVEVAETG"
BASE COUNT          536 a         1305 c         1265 g          530 t
ORIGIN      
        1 gcctgccggc ataggttccg gcgttgccat acacgccgcg cacctgcacc ggcatgccga
       61 cgtgcaacgc cgcgccggta tccggctgca ccccgagcgc cgcgatcaag gcgctggtcg
      121 gcatgaaccc gagcagcggc gcattcgccg cgaaacgctc gccgagctgc accgacaacg
      181 cggtgaccac gccggccgcc ggcgcggtca ccgtctcctc cggcacgcca ccgccgagcg
      241 cctgctgtgc ggcgacctcc gcctgggcat cggccagcgc cttgcgcacc gtcgccacct
      301 gcgactgcgt ggccaggtgc tgcgcggcaa gctgttcgat gcgttgcagc tcgccggtgg
      361 ccagcgtgag cgcgctatgc gcctgctggt acgcggcgcg cgccgccgga tcgggggcga
      421 cggcgagcag cggctggccg cgggtgacgg tctgccctgc gctcaccagc aagcgggtca
      481 cctcgccgcc atgcgccagg ctgatgaggc gcgcacggtg cgggtcggcc tgcgcgctgc
      541 cccacgccgc cacctcgtcg tggaagctgc gccgctgcgg catcgcggtg gtcacctgcg
      601 ccacgccagc gacatcggcg ccgccactcg cctcgtcgtc gccaccgccg ccaccgcagg
      661 cagccagcag caggccggcg atcgccacga cggcagtgcg cacaagcaag gtcgatttca
      721 tcgtttggac gtccgtggaa tgacgaagtc ggtgcgcccc agcaaggctt cgagcgcgat
      781 cgcatcggcg gaacgcgttt gcccgagcgt aatcgcgtcg gtatccgcgg ccagcgcgtt
      841 gccgcggatc gcgagatagg tgggccaatc gagcaggccc gcgcgccagg ccttttcggc
      901 cgcggtgcgt gccgcgtcca gttgctgcgc gtgggcggcc tgggtgcgcc gccgcgcgtc
      961 cagcgtcgcc aggtcggctg ccagccgcgc gacgtcgctg tgcgccgcca gcaggcgcgc
     1021 cgcgtagtca tccttcaact gctggcgggt cgcggtctcg atcgcgatgt tgccgcgatt
     1081 gcggttgaac aacggcagcg tgatgccgac gctgaagccg taggtggtga cgttgctggt
     1141 gtcacgcgca cggttgaagc ccagcgtgat cgccgggaac tgggccagga tggccgcgcg
     1201 caaccgcgcc tcctgcgcgc gataaccggc ctgcagcgcc agcaggtcgg gccgccggcg
     1261 cggcaggtcg gcgagcgccg ccgcgcgttg cgcggcatcg gggtcgacct ggtacggcgc
     1321 gccgacgaga tccagcggcg cgtccggggc caggcccagc aactgtcgca ggtcgctctc
     1381 ggcctggtgc aaggccaccg cattgtcggt ggcgcgcgtg cgcacgtcgg ccagcgcatt
     1441 gagcccggcg ctggcaccat cgtaactcag atttccggcg gcgagcgcgg cccgcacggc
     1501 cgcatccacc ggcgtcaacg cgcgttgctc ggcatccagc agggtcgtca tcgcgcgcaa
     1561 gctctgtacc tggtcgaaca acaaccgcgc ctgcgcaatg gtctgccact cggcccacaa
     1621 caggtcgagg ttcacctgct cagcctgggc atcggcgacg cgccggcgcg acgagcgcag
     1681 cagcaacgcg ctcacgtcgg cgctgaggcc gaggttgtag gcacgggtgc tgccactggg
     1741 cgcgtgatgc gggaaatccg caccgaaccc cagctgcggg tcgggcagca ggccagcgtc
     1801 gaaggcctgc gcgcgggcga tgccgagtgc gtcgcgctgc agcttcagat cggggctgtt
     1861 cgccaccgcc agcatcgcga cctcggtgac gtccaggccg tcggctggat cgaaacgatg
     1921 cgccgccagc tccggcaccg gcatctcgct cgccggcgcc tgcagctgcg cggcgcgggt
     1981 cgcgaaatcg ttgccgccca gcggcagcgg atggtaagtc gcgcacgcgc cgaggcaggt
     2041 tgcgacacac gcgccaagca ccgcgcaccg tccacgccgg acggccgtgg cggcatgcac
     2101 gcggatcggg cgcaacgcag acaaataagc cattgcatgc agcatgcgcc catcggctta
     2161 gccgttgctt accctcggcg cgcgcgcccg acgcgagcag gccttggttc accccgtttc
     2221 cgccacctcg acaaacaccc ggttgcggcc gccgcgcttg gccttgtaca gccccatgtc
     2281 ggccgcatgg aacaaacgct gcagcgtgta gccgcaggtg tcggtgaacg cgaggccggc
     2341 gctggtcgac acggcgatgg tggcaccatc caatgccaca ctggtggcct ccaccgcatg
     2401 ccggatacgg tcggcgatcg tcaccccctg ctcgcgcgtg caccccatca gcagaatgcc
     2461 gaactcctcg ccgccgaggc ggccgaacaa gtcgatgggg cgcaggtgct ggcggctggc
     2521 gtcgaccgtg cgccgcagca cctcgtcgcc cgcggcgtgg ccgtgggtgt cgttgacacg
     2581 cttgaagtgg tcgaggtcga tgaacaccat gcatgccggc gcgcgtcggc gttcaagttc
     2641 gtgcaatgcg ccctcggcct cggcaacgaa gtgctggcga ttgagcaggc cggtgaggcc
     2701 gtccagccgc gacaactgct tgaagcggag ctgcgagcgt ttcaggcgaa gcatcgccac
     2761 cacggcaagg gccaggatca ccagcaacag caacgcgtac cgccgggcgg cctccgcctt
     2821 cttcgcatcc agcgcacgcc gcatgcgcag cgtggtgttc tgctgggcaa gccgcgccgt
     2881 ctccagctgc tgcgccagca cgcgctgctg caccacctga taggccagcg cgcgtgcatt
     2941 gacgtcgtcg agataggccg tgtccagcgc ggcgtacttc tcgtagtagc cgagggccgc
     3001 ggcggcgttg ccccgctgct tttcgacgcg gtagagcacc tcataggtgt ccttctggtc
     3061 gaagtcgatg gcaggcccgg ccgcgacggc ggccagcgcc gtcttgcggg cggcatcgtc
     3121 cttccccaac gcaaccagcg cccacgcccg gacctgcagc gcggtcagtt tgtcggaggc
     3181 ataccctgcg gcatccaccc ggggctggat ccggtcgagc agggccagcg ccttgtgtgg
     3241 ctggccaccg cgggcataca ggctcgccag gttgagggtg aggcccgtgt tgtagagcga
     3301 ctccgtggcc atcggacaag catcgaacgc ctgctgcaac tccaggctgt cgggcttgag
     3361 tctgcggcca tcgaacagca cctcgaccag gatgccggct gcatagcacc ggttgctcgg
     3421 gctggggtcg gcagtcatcg ccatttgcgc gtagcgcacg gccaggtcgg tctgccccgc
     3481 cagccccatc gcctgcgcca ggttcagcaa cagcgcatag cgggccttcg catccgcgac
     3541 ctgcggcagg cgcgccgcaa ggcggttggc cagctcgaac gcctccgtgt agcgccgcat
     3601 gacgccaagc tggctcagcc gcgaggcgga tgcccg
//
LOCUS       DASSVL010000506         3105 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_816637, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000506 DASSVL010000000
VERSION     DASSVL010000506.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3105)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3105)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3105
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_816637"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..828
                     /gene="phoR"
                     /locus_tag="VFM52_08870"
     CDS             <1..828
                     /gene="phoR"
                     /locus_tag="VFM52_08870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007806178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006796 - phosphate-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate regulon sensor histidine kinase PhoR"
                     /protein_id="HET8765318.1"
                     /translation="WALLEQGEAQDIAAPADDGVRLALSLTAYGAHRRLLVARDISQV
                     RRLEQVRRDFVANVSHELRTPLTVIHGYLELLAPEDVPALAGVLQEMRVQSQRMRQIV
                     EDLLMLSHLEMQQRLDEERVEMAPLLDGLRHEAEALSQGRHRIHVSNAEPLDLLGSPR
                     DLHSAFSNLVSNAVRYTPDGGDISIAWRRRGDGAEYAVTDTGYGIPAEHLPRLTERFY
                     RVSSSRSRASGGTGLGLSIVKHVLNLHDAELRIESTPGKGSTFACVFKAARLLDARG"
     gene            complement(852..2069)
                     /gene="hutI"
                     /locus_tag="VFM52_08875"
     CDS             complement(852..2069)
                     /gene="hutI"
                     /locus_tag="VFM52_08875"
                     /EC_number="3.5.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008434647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050480 - imidazolonepropionase activity
                     [Evidence IEA];
                     GO_process: GO:0006548 - histidine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="imidazolonepropionase"
                     /protein_id="HET8765319.1"
                     /translation="MTTPHWDLLVTHATLATFAGGAPFGLIEDGAIACVDGRIAWVGP
                     AAELPAGAAATQVEDARGALVTPGLVDCHTHLVFGGERANEFDLRLNGASYEEISRAG
                     GGIVSSVRATRAASEDELLAQSLPRARALLADGVTTVEIKSGYGLELDAERRMLRVAR
                     RIGAELGIGVRTSFLGLHALPPEYQDRRDAYVALVCDAMLPTLAAEGLVDAVDAFCER
                     IAFTPAETRRLFARAQALGIPVKLHAEQLSDQGGAALVADFHGLSADHLEHLGATGIA
                     AMAQAGTVAVLLSGAFYALRETQAPPVAALREAGVPIAIATDLNPGTSPLLSLRLAAN
                     LACTLWRLTPDEALRGVTVNAARALGLTDRGTLAVGQRADLVAWNARHPAELCYWIGG
                     TLARRVWVAGKTV"
     gene            complement(2139..>3105)
                     /locus_tag="VFM52_08880"
     CDS             complement(2139..>3105)
                     /locus_tag="VFM52_08880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008434648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="carbon-nitrogen hydrolase family protein"
                     /protein_id="HET8765320.1"
                     /translation="GCAAHLVWCNPRLLDQPDMPPIAAPRRLPDTVRVASVQYLQRRI
                     ASFDEFATQIEYFTGIASGYDADFVVFPELITLQLLSIENTELSPTDAIRKLSEYTPE
                     VKALFSRLAVHGNINIIAGSHPTAQPNGDIHNVCYVCLRDGSIHEREKLHVTPSERLT
                     WHITGGESAATVQTDCGPIGVMICYDAEFPEVARHLVDQGALLLFVPFCTDVREGYLR
                     VRYCAQARAIENQCYVVLSGNVGNLPGVYNFDIQYGQSCILTPSDFPFARDGVAADST
                     PNNETVLFADLSLESVARARNAGAVQNLKDRRYDLYETRWLPRPR"
BASE COUNT          461 a         1055 c         1121 g          468 t
ORIGIN      
        1 tgggccctgc tcgaacaggg cgaggcacag gacatcgccg cgcccgccga cgacggcgtg
       61 cgccttgcgc tttcgctcac cgcctatggg gcgcaccggc gcctgctggt ggcgcgcgac
      121 atcagccagg tgcgccgact ggaacaggtg cgccgcgatt tcgtcgccaa cgtgtcgcac
      181 gagctgcgca cgccgctgac cgtgatccac ggctatctcg aattgctggc tccggaggat
      241 gtgccggcgc tggccggcgt gctgcaggag atgcgcgtac agtcgcagcg catgcgccag
      301 atcgtcgagg atctgctgat gctgtcgcac ctggagatgc agcagcgcct ggacgaggag
      361 cgggtggaga tggcgccgct gctcgacggc ctgcgccacg aggccgaggc gctcagccag
      421 ggccgccacc gcatccacgt gagcaacgcc gagccgctcg atctgctggg ctcgccgcgc
      481 gacctgcaca gcgcgttctc caacctggtc agcaacgcgg tgcgctacac gcccgacggc
      541 ggcgacatca gcattgcgtg gcggcgccgc ggcgacggcg ccgaatacgc ggtcaccgac
      601 accggctacg gcattcccgc cgagcatctg ccgcggctca ccgagcgttt ctaccgcgtg
      661 tcgtccagcc gctcgcgcgc ttccggcggc accgggctgg ggctgtccat cgtcaagcac
      721 gtgctgaacc tgcacgatgc cgagctgcgg atcgaaagca cgccgggcaa gggttccacc
      781 ttcgcctgcg tgttcaaggc tgcgcggttg ctcgacgcgc gcggctagtg tcgtgatcgt
      841 ccgcggcgtc gctacaccgt cttgccggca acccacaccc ggcgcgccag cgtgccgccg
      901 atccagtagc acagttcggc gggatggcgt gcgttccacg ccacgaggtc ggcgcgctgg
      961 ccgacggcga gcgtgccgcg gtcggtgagg ccgagcgcgc gcgcggcgtt gacggtgacg
     1021 ccacgcaggg cttcgtctgg cgtcaggcgc cacagggtgc aggcgaggtt ggccgccagg
     1081 cgcagcgaca gcagcggcga agtgccgggg ttcaggtcgg tggcgatcgc gattggcacg
     1141 ccggcttcgc gcagtgccgc gaccggcggc gcctgggttt cgcgcaacgc gtagaacgca
     1201 ccagacagca gcacggcgac ggtgccggcc tgtgccatcg cggcgatgcc ggtggcgccg
     1261 aggtgttcga gatgatcggc cgacagcccg tggaaatcgg caaccagtgc ggcgccgccc
     1321 tggtcggaca gctgctcggc atgcagcttc accgggatgc ctagcgcctg cgcgcgcgcg
     1381 aacaggcggc gggtttccgc cggggtaaac gcgatgcgct cgcagaacgc gtcgaccgca
     1441 tcgaccagcc cttcggcggc gagcgtcggc agcatcgcgt cgcacaccag cgccacgtag
     1501 gcgtcgcggc gatcctggta ctcgggcggc agcgcgtgca ggccgagaaa gctggtgcgc
     1561 acgccgatgc cgagttccgc gccgatacgc cgcgcgacgc gcagcatgcg gcgctcggca
     1621 tccagttcca gcccgtagcc ggacttgatc tccaccgtgg tgacgccgtc ggcaagcagg
     1681 gcgcgcgcgc gcggcagcga ctgcgcaagg agctcgtcct cgctcgccgc gcgcgtcgcg
     1741 cgcacgctgg acacgatgcc gccgccggcg cgggaaatct cctcgtagct cgcgccgttc
     1801 aggcgcaggt cgaactcgtt cgcacgctcg ccgccgaaca ccaggtgcgt gtggcaatcg
     1861 acgagccccg gcgtgaccag cgcgccgcgc gcatcctcga cctgcgtggc ggccgcgccg
     1921 gccggcagct ccgccgccgg cccgacccac gcgatgcgcc cgtcgacgca agcgatcgca
     1981 ccatcctcga tcagcccgaa cggcgcgccg ccggcaaacg tcgccagcgt ggcgtgggtg
     2041 acgaggagat cccagtgcgg cgtggtcatg gtgcggtgtc cgtgcatatc gtggcgtcgg
     2101 ccattatcgc cgctgacacc tggcacggcg cgcggcgatc agcgtgggcg cggcagccag
     2161 cgcgtctcgt acaggtcgta gcggcggtcc ttgaggttct gcacggcgcc ggcgttgcgc
     2221 gcgcgggcga cgctttcgag gctcagatcg gcgaacagca cggtttcgtt gttgggcgtg
     2281 gaatcggcgg ccacgccgtc gcgcgcgaac gggaaatcgc tcggcgtgag gatgcagctc
     2341 tgcccgtatt ggatgtcgaa gttgtagacg ccgggcaggt tgccgacgtt gccggaaagc
     2401 accacgtagc actggttctc gatggcgcgc gcctgcgcgc agtagcgcac gcgcaggtag
     2461 ccttcgcgca cgtcggtgca gaacggcacg aacagcagca gcgcaccctg gtcgacgagg
     2521 tggcgcgcga cttcgggaaa ctcggcgtcg tagcagatca tcaccccgat cggcccgcag
     2581 tcggtctgca ccgtcgctgc gctctcgccg ccggtgatgt gccaggtcag gcgttcgctc
     2641 ggcgtcacgt gcagcttctc gcgttcgtgg atcgagccgt cgcgcaggca cacgtagcac
     2701 acgttgtgga tgtcgccgtt cggttgcgcg gtcgggtggc tgccggcaat gatgttgatg
     2761 ttgccgtgca cggccaggcg cgagaacagc gccttcacct cgggcgtgta ttcgctcagc
     2821 ttgcggatgg cgtcggtggg cgacagctcg gtgttctcga tcgacagcag ctgcagcgtg
     2881 atcagttccg gaaacaccac gaaatcggcg tcatagcccg acgcgatgcc ggtgaagtat
     2941 tcgatctgcg tggcgaattc atcgaacgag gcgatgcgcc gctgcaggta ttgcacgctg
     3001 gccacgcgca cggtgtccgg caagcggcgc ggtgcggcga tgggcggcat gtcgggctgg
     3061 tcgagcaggc gcggattgca ccacaccaga tgggccgcgc agccg
//
LOCUS       DASSVL010000507         3752 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_308046, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000507 DASSVL010000000
VERSION     DASSVL010000507.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3752)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3752)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3752
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_308046"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..369
                     /locus_tag="VFM52_08885"
     CDS             <1..369
                     /locus_tag="VFM52_08885"
                     /inference="COORDINATES: protein motif:HMM:NF012694.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HET8765321.1"
                     /translation="CSPVRRPRFPTSCVTPGPISPRPVSAQDSLRASRSGATVSGTAG
                     TLAILVGGGVPLLAPLDYGANAMSNPAMQADIKAAIERAGEGDTLVRALAAARMLHVV
                     GSEEASGKLEPMLDDAWRRR"
     gene            complement(525..1292)
                     /gene="phbB"
                     /locus_tag="VFM52_08890"
     CDS             complement(525..1292)
                     /gene="phbB"
                     /locus_tag="VFM52_08890"
                     /EC_number="1.1.1.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007508971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018454 - acetoacetyl-CoA reductase
                     activity [Evidence IEA];
                     GO_process: GO:0042619 - poly-hydroxybutyrate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetoacetyl-CoA reductase"
                     /protein_id="HET8765322.1"
                     /translation="MNSTSRPAARRVALVTGGIGGLGTEICRHLAAAGRVVIAADLPA
                     KPERLAAFHAATEAFGDAIRYRELDVSDHAACAALISALEAGHDSVDILVNAAGITRD
                     ASLRKMTPAQWHELMQVNLDGVFNTCHAAINGMTTRGFGRIVNISSVNGQTGQFGQTN
                     YSAAKAAVHGFTMALARETARKGITVNTVSPGYCDTPMVAAVAADIRAQIIAGIPVGR
                     LGQPADIARAVAFLTADDAGYLTGVNLPVNGGYFMSF"
     gene            complement(1359..1856)
                     /gene="phaR"
                     /locus_tag="VFM52_08895"
     CDS             complement(1359..1856)
                     /gene="phaR"
                     /locus_tag="VFM52_08895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007082048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyhydroxyalkanoate synthesis repressor PhaR"
                     /protein_id="HET8765323.1"
                     /translation="MTQSKRIIKKYPNRRLYDTEISSYITLEEVRQLVLDNEDFEVRD
                     AKSGEDLTRSVLLQIISEHEEQGQPMLSPRLLSQIIRFYGDSLQGFMGPYLERSLQVF
                     LDQQQQFRTQLNSLMGQTPWTMLNDLTERNMDAWKSMQRGMLDAAAQMHPPGTANRTG
                     NKKVG"
     gene            complement(1980..3533)
                     /locus_tag="VFM52_08900"
     CDS             complement(1980..3533)
                     /locus_tag="VFM52_08900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007508967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0006855 - xenobiotic transmembrane
                     transport [Evidence IEA];
                     GO_process: GO:0009410 - response to xenobiotic stimulus
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DHA2 family efflux MFS transporter permease
                     subunit"
                     /protein_id="HET8765324.1"
                     /translation="MATSPSPAAPLPPLQGGVLALLTIAVAFSTFMEVLDMTIVNVAV
                     PHIAGSLGVSPNEGTWAISSYALASAIVQPLTGWLARRFGEVRTFVASVLLFVVFSML
                     CGLATSMPMLVACRLLQGAGSGPMVALSLTLLLSNYPAAKQGIALALWAMTVVVAPIF
                     GPILGGWLADNFSWPWIFFINLPVGAAAAVVTWSILRKRETRTTKAPIDMVGLALLIF
                     GVGSLQFMLDHGNDHDWFASPMIVTLGVIALVCLTFLVVWEIHAKHPVVDLSLFKQRN
                     FTVGVLALTAGMFAFFGINVVFPLWLQVDLGYTATWAGLATAPIGVLAFLLAPIIGKN
                     MDRLELRAVVTFAFIVFAGTAYWLSTFDSNASFAKLVLPPFVMGLAIPCFFIPLNQVY
                     LAGLPASEFANASGLANFCRTIGSSMSTAVTVTLWQHRSELHHATLTEYVSPAHPAAT
                     TFLHDLAQRGMPPRQGLGLVDQLIQRESLTLGVNDVFLGCAVLFLLLIPILWFARPPF
                     GSAGGAVGH"
     gene            complement(3555..>3752)
                     /locus_tag="VFM52_08905"
     CDS             complement(3555..>3752)
                     /locus_tag="VFM52_08905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007508966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EmrA/EmrK family multidrug efflux transporter
                     periplasmic adaptor subunit"
                     /protein_id="HET8765325.1"
                     /translation="RELDAHPLRVGLSAEVTVDIRHADGKVLAAGPARAAAQTTVYDN
                     VAHAADAEADKVIAANLGTAH"
BASE COUNT          642 a         1195 c         1324 g          591 t
ORIGIN      
        1 tgctcacccg ttcgccgccc ccggttccca acttcctgcg tgaccccggg acctatctcg
       61 ccgcggccgg tatccgcgca ggattcgctg cgtgcgtcgc gctccggtgc gaccgtctcc
      121 ggcaccgctg gcacgctggc catcctggtc ggcggaggcg tgccgctgct ggcgccgctc
      181 gactatggcg ccaacgcaat gtccaacccg gccatgcagg cagacatcaa ggccgccatc
      241 gaacgcgcgg gcgaaggcga cacgctggtt cgcgccctgg cggcggcgcg gatgctgcac
      301 gtggtcggca gcgaggaagc gagcgggaag ctggagccca tgctcgacga cgcctggcgg
      361 cgccgctgac gctgcgcgaa ccggccatga ccctggtggt catggccggg gtggggctga
      421 tgattgtcat ggccatcctg ctgccgatca tggagatcga tcagctggtg cgtcgatgcg
      481 ctgctcgaag ggaaggcgca ccgcgcctgc cgcggacgcc tcgctcagaa gctcatgaag
      541 tagccgccgt tcaccggcag gttgacgccg gtgagataac cggcgtcgtc ggcagtaagg
      601 aaggcgacgg cgcgggcgat gtcggccggc tggccgaggc ggccgaccgg gatgccggcg
      661 atgatctggg cgcggatgtc ggccgccacg gcggcaacca tcggcgtgtc gcaatagccg
      721 ggcgagacgg tgttgacggt gatgcccttg cgcgcggttt cacgtgccag cgccatggtg
      781 aagccgtgca ccgcggcctt ggcggcggag tagttggtct gcccgaactg gccggtctgg
      841 ccattgaccg agctgatgtt gacgatgcgc ccgaagccgc gcgtggtcat gccgttgatc
      901 gcggcgtgac aggtgttgaa cacgccgtcg aggttcacct gcatcagctc gtgccactgc
      961 gcgggcgtca tcttgcgcag gctggcgtca cgggtgatgc cggcggcgtt gaccaggatg
     1021 tcgacgctgt cgtgcccggc ttccagtgcg gagatcaacg ccgcgcaggc ggcgtggtcg
     1081 ctgacgtcca gctcgcggta ccgaatggcg tcgccaaacg cttcggtggc ggcatggaac
     1141 gcggcgaggc gttccggttt cgccggcagg tcggcggcga tgaccacgcg gccggcggcg
     1201 gccaggtggc gacagatttc cgtgcccaat ccaccgatgc caccggtgac gagggcgaca
     1261 cggcgcgcgg ccgggcggct ggtcgaattc atgtggggtg ttccaacgga cacgcgccgc
     1321 tctgggcggc gcgtgaaagg gttgcgggaa gagtcagctc agccgacttt cttgttgccg
     1381 gtgcggttgg cggtgcctgg cggatgcatc tgcgccgcag cgtccagcat gccacgctgc
     1441 atcgacttcc aggcgtccat gttgcgctcg gtcaagtcgt tcagcatggt ccacggcgtc
     1501 tggcccatca ggctgttgag ctgggtgcgg aactgctgct gctggtcgag gaacacctgc
     1561 aggctgcgtt cgaggtatgg gcccatgaaa ccctgcagcg agtcgccgta gaagcggatg
     1621 atctggctca ggaggcgtgg cgacagcatt ggctgcccct gttcctcatg ctcggagatg
     1681 atctgcagca gtaccgaacg ggtgagatcc tcgccgctct tggcgtcgcg gacctcgaag
     1741 tcctcgttgt ccagcaccag ctggcgtacc tcttccagcg tgatgtagct ggagatctcg
     1801 gtgtcgtaga ggcgccggtt cgggtacttc ttgatgatgc gtttggattg ggtcatgcgg
     1861 cgacgctagc agaagatatt gcgccgcacc agtagaccac tggtatgcac gccactggaa
     1921 ttggtcttgt cgacgagccc tgccagtgcg gcaatccgtg ccggtggtct gcagcaaaat
     1981 cagtgcccga cggcgccacc ggcgctgccg aaaggcggcc gcgcaaacca caggatcggg
     2041 atcaacagca ggaacagcac cgcgcagccg aggaacacgt cgttgacccc gagcgtgagc
     2101 gattcgcgct ggatcaactg gtcgaccagg cccaggcctt gccgcggcgg catgccgcgc
     2161 tgtgccagat cgtgcaggaa ggtggtcgcg gccggatgcg ccgggctgac gtactcggtg
     2221 agcgtcgcgt ggtgcagttc gctgcggtgc tgccacagcg tgacggtgac tgcggtggac
     2281 atgctcgaac cgatggtgcg gcagaaattc gccagccccg aggcattggc aaactccgag
     2341 gccggcaggc cggcgagata cacctggttc agcgggatga agaagcacgg gatggccagc
     2401 cccatcacga acggcggcag caccagcttg gcgaacgacg cgttgctgtc gaaggtggac
     2461 agccagtacg cggtgccggc gaacacgatg aaggcgaagg tcaccaccgc gcgcagctcg
     2521 agtcgatcca tgttcttgcc gatgatcggc gcgagcagga acgccagcac gccgatcggt
     2581 gccgtcgcca gcccggccca ggtggcggtg tagccgaggt cgacctgcag ccacagcggg
     2641 aacaccacat tgatgccgaa gaacgcgaac atcccggccg tcagcgccag cacgccgacg
     2701 gtgaaattgc gctgcttgaa cagcgacaga tcgaccaccg gatgcttggc gtggatttcc
     2761 cacaccacca ggaaagtcag gcaaaccagc gcgatcacgc caagcgtcac gatcatcggc
     2821 gaggcgaacc aatcatggtc gttgccgtgg tcgagcatga attgcaggct accgacgccg
     2881 aagatcagca acgccagccc gaccatgtcg atcggcgcct tggtggtgcg cgtctcgcgc
     2941 ttgcgcagga tcgaccaggt caccaccgcg gcggccgcgc cgaccggcag gttgatgaag
     3001 aagatccacg gccacgagaa attgtcggcc agccagccgc cgaggatcgg cccgaagatc
     3061 ggcgcgacga ccaccgtcat cgcccacagc gccagcgcga tgccttgctt cgcagccggg
     3121 tagttgctca gcagcagggt cagcgacaac gcgaccatcg gcccggagcc ggcgccctgc
     3181 agcaggcggc acgccaccag catcggcatc gaggtcgcca acccgcacaa catcgagaac
     3241 accacgaaca acagcaccga ggcaacaaag gtgcgcactt cgccaaagcg ccgcgcgagc
     3301 cagccggtca agggctgcac gatggcgctg gccagcgcgt aggagctgat cgcccaggtg
     3361 ccttcgttcg ggctgacgcc gaggctgccg gcgatatgcg gcacggcgac gttgacgatc
     3421 gtcatgtcca gcacctccat gaaggtgctg aacgcgacgg cgatggtgag cagcgcgagc
     3481 acgccgcctt gcagcggcgg caacggtgcc gcgggggatg gggaggtggc catcgagggg
     3541 tgtgccgccg gggtttagtg cgcagtgccg aggttggcgg cgatcacctt gtccgcctcg
     3601 gcatcggcgg catgggcgac gttgtcgtac accgtggttt gcgcggccgc gcgcgccggg
     3661 cccgccgcca gcaccttgcc gtcggcgtgg cggatgtcca ccgtcacttc ggccgacagc
     3721 cccacgcgca gcgggtgggc gtcgagctca cg
//
LOCUS       DASSVL010000508         2012 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1409545,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000508 DASSVL010000000
VERSION     DASSVL010000508.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2012)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2012)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2012
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1409545"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..384)
                     /locus_tag="VFM52_08910"
     CDS             complement(<1..384)
                     /locus_tag="VFM52_08910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008208062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA];
                     GO_process: GO:0009451 - RNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pseudouridine synthase"
                     /protein_id="HET8765326.1"
                     /translation="MPPIDILHRDDDLVVVNKPAGMPVHRSQMVNDADEYLVDVLREQ
                     LGGNVFLAHRLDRATSGVLLVARSSAIAAALGEQFMQRTVHKRYLAVVRGWPEPDTGV
                     IDYPLPGAREAGPRHEARTGYRRLAT"
     gene            complement(415..>2012)
                     /gene="ubiB"
                     /locus_tag="VFM52_08915"
     CDS             complement(415..>2012)
                     /gene="ubiB"
                     /locus_tag="VFM52_08915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008437546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006744 - ubiquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ubiquinone biosynthesis regulatory protein
                     kinase UbiB"
                     /protein_id="HET8765327.1"
                     /translation="WRLDEIVKSAHLFRPLRLLRPLFGKPRPDVDTLSRGARLRGAMT
                     ELGPIFVKFGQILSTRRDLVPADIADELAQLQDQVPPFPGSEARTIVERELKAPVGRL
                     YATFDETPLASASIAQVHAATLPDGRAVVVKVLRPGIDAKIARDVKLLRSLGTLADRW
                     HPNADKIRPLDVVAEVEKMLENELDLQREGASASLLKRNFASGVDLYVPAVHWELTAS
                     RVLTLERVHGISSDDIAAIDAAGLDRKALAAKGVRVFYEQVFRDNFFHADAHPGNIWV
                     DPSRLDEPRFIALDFGIMGSLPEADQYWLAQNFIALFERDYARIAKLHVDAGWMPRTV
                     RLDELEAAVRTVCEPYFTRPLAQISLAELVVKLFQTARRFELTLQPQLILLQKTLLNI
                     EGVGRLLDPEIDIWAVAHPVLKRILRERYSPLRTFGEVRKRLPEWFHMAPRLPGLVHD
                     ALEQAARGEQRLLADVDTFSHQKRLVRSLMRMIACGLFGATLLVCATLLWSLAPHHGG
                     WLPPATAILGVLAFVYGWSHKRP"
BASE COUNT          297 a          690 c          729 g          296 t
ORIGIN      
        1 ggtggcgagg cgccggtagc cggtacgcgc ctcgtggcgc gggccggctt cgcgcgcgcc
       61 cggcagcgga tagtcgatca ccccggtgtc cggctccggc cagccgcgca ccacggccag
      121 gtagcgcttg tgcaccgtgc gctgcatgaa ctgctcgccg agcgccgcag cgatggcgct
      181 ggatcgggcg accagcagca cgccgctggt tgcgcgatcc agccggtggg cgaggaacac
      241 gttgccgcca agctgctcgc gcagcacgtc gaccaggtat tcgtcggcgt cgttcaccat
      301 ctgcgagcga tgcaccggca tgccggccgg cttgttgacg accaccaggt cgtcgtcgcg
      361 gtggaggatg tcgatcggcg gcatggggtc cgaggcggcc ggagccgcct ccattcaggg
      421 ccgcttgtgc gaccagccgt acacgaacgc cagcacgccg aggatcgcgg tggccggcgg
      481 cagccagccg ccgtgatgcg gcgccagcga ccacagcagc gtcgcgcaga ccagcagcgt
      541 ggcgccaaac agtccgcacg cgatcatccg catcaggctg cgcaccagcc tcttctggtg
      601 gctaaaggtg tcgacgtcgg cgagcaggcg ctgttcgccg cgcgcggcct gttccagcgc
      661 gtcgtgcacc aggccgggca ggcgcggcgc catgtggaac cactcgggca ggcgcttgcg
      721 cacctcgccg aaggtgcgca gcgggctgta gcgctcgcgc aggatgcgct tcagcaccgg
      781 gtgcgccacc gcccagatgt cgatctcggg atcgagcagg cggccgacgc cctcgatgtt
      841 gagcagcgtc ttctgcagca ggatcagctg cggctgcagc gtcagctcga accggcgcgc
      901 ggtctggaac agtttcacca ccagctcggc cagcgagatc tgcgcgagcg gacgggtgaa
      961 gtacggctcg cacaccgtgc gcaccgcggc ttcgagctcg tccaggcgca ccgtgcgcgg
     1021 catccagccg gcatccacgt gcagcttggc gatgcgcgcg tagtcgcgct cgaacagcgc
     1081 gatgaagttc tgcgccagcc agtactggtc ggcctcgggc agcgagccca tgatgccgaa
     1141 gtccagcgcg atgaagcgcg gctcgtccag gcgcgacggg tccacccaga tgttgccggg
     1201 gtgggcgtcg gcgtggaaga aattgtcgcg gaacacctgc tcgtagaaca cccgcacgcc
     1261 cttggcggcc agtgccttgc ggtcgagccc ggcggcgtcg atcgcggcga tgtcgtcgct
     1321 gctgatgccg tgcacgcgct ccagcgtcag cacgcgcgag gcggtcagtt cccagtgcac
     1381 cgccggcacg tacaggtcca cgccgctggc gaagttgcgc ttgagcaggc tggcgctggc
     1441 gccttcgcgc tgcaggtcaa gctcgttctc cagcatcttc tcgacttccg ccaccacgtc
     1501 cagcgggcgg atcttgtcgg cgttggggtg ccagcggtcg gccagcgtgc ccagcgagcg
     1561 cagcagcttc acgtcgcgcg cgatcttggc gtcgatgccg gggcgcagca ccttgaccac
     1621 cacggcgcga ccgtcgggca gggtggcggc gtgcacctgg gcgatcgagg cggaggccag
     1681 cggtgtctcg tcgaaggtgg cgtagagacg gccgaccggc gctttcagct cgcgctcgac
     1741 gatggtgcgc gcctcgctgc cggggaaggg cggcacctgg tcctgcaact gtgccagctc
     1801 gtcggcgatg tcggccggga ccaggtcgcg gcgggtggac aggatctgcc cgaacttgac
     1861 gaaaatcggc cccagctcgg tcatcgcgcc gcgcaggcgg gcgccgcgcg acagcgtgtc
     1921 cacgtccggt cgcggcttgc cgaacagcgg acgcagcagc ctgagcgggc gaaacaggtg
     1981 ggcgctcttg acgatctcgt ccagccgcca cg
//
LOCUS       DASSVL010000509         2851 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1000298,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000509 DASSVL010000000
VERSION     DASSVL010000509.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2851)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2851)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2851
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1000298"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(106..852)
                     /locus_tag="VFM52_08920"
     CDS             complement(106..852)
                     /locus_tag="VFM52_08920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007514026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HET8765328.1"
                     /translation="MAESFQLRLADSRMLAPSVRHLAFERADGTPLVFKPGQFLQVHF
                     KYPDGAPAKRSYSIATVGDGNSPIARVELVVSYVTGGAATKLFADLEAGDVIDASGPN
                     GRFCLLPNDVQPRYLLIATGTGIAPYRAMLPQLDRVLADGAREVVLLYGARNEAELLY
                     ADEFEAFAQTHPGFRFHACLSRAPRAVPRASDHRGHVQDLLADLAPRAERDIAYLCGN
                     PAMVDATYAALREYGLPIGQIRREKYVSSR"
     gene            946..1905
                     /locus_tag="VFM52_08925"
     CDS             946..1905
                     /locus_tag="VFM52_08925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017463828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HET8765329.1"
                     /translation="MSPVPALVVDNLRKTYEGGVEALKGVSFRVEQGDFFALLGPNGA
                     GKSTLIGILSSLVNASSGDAQIFGVSVRKRRNAAMRLIGLVPQELNFNQFEKPFDICV
                     NEAGFYGIPRALAAERAEKYLKTMSLWDKADQAARRLSGGMKRRLMIARAMMNEPKLL
                     ILDEPTAGVDIEIRRSMWQFIDGINAAGTTVILTTHYLEEAEQLCRNIAIIDHGTIVE
                     NTTMRSLLAKLDVETFVLDTAAPLATLPAIDGLTLRRIDERTLEAAVPHTRDINTLFT
                     ALTAHGITVTSMRNKTNRLEELFVRLVEHGRDGAAQPRAEVVA"
     gene            1902..2681
                     /locus_tag="VFM52_08930"
     CDS             1902..2681
                     /locus_tag="VFM52_08930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007514030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HET8765330.1"
                     /translation="MSESSPNLIALKTIVRREIVRILRIWTQTLIPPAITMTLYFVIF
                     GTLIGSRIGQVEGHFTYMQFIVPGLVMMAIITNSYGNITSSFFGAKFGHYVEEMLVSP
                     MSPWVMLTGYVIGATVRGLAVGVIVLGIALFFTSLDIQHPLITAGSVVLGAVIFSLAG
                     FINAVYAKKFDDIAIIPIFILTPLTYLGGVFYSINMLGEPWRTLSKANPILYMVNAFR
                     YGVLGISDVNIAWSFAVMLGFVAALAAFGLQLLKRGVGLRS"
     gene            2695..>2851
                     /locus_tag="VFM52_08935"
     CDS             2695..>2851
                     /locus_tag="VFM52_08935"
                     /inference="COORDINATES: protein motif:HMM:NF013633.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S4 domain-containing protein"
                     /protein_id="HET8765331.1"
                     /translation="MRVNKYISEAGLCSRREADELLLAGRVTINGETVTTGAKALEGD
                     EVRVDGEI"
BASE COUNT          491 a          970 c          929 g          461 t
ORIGIN      
        1 cgaactggcg gtgaatgcgg cgtctgcgcg cgtgggggat tcatcgacac ggcgacaaca
       61 acctgaagcg cccccgctgg aaccggctga tcgccgcgct cacgctcagc gtgagctgac
      121 gtatttctcg cgacggatct ggccgatcgg caggccgtat tccctgagcg cggcataggt
      181 ggcgtcgacc atggccgggt tgccgcacag gtaggcgatg tcgcgctcgg cgcgcggcgc
      241 caggtcggca agcaggtcct gcacgtggcc gcggtggtcg ctggcgcgtg gcacggcgcg
      301 cggggcgcgg ctcaggcagg catggaaacg gaagccggga tgggtctgcg caaacgcctc
      361 gaactcgtcc gcatacagca gctccgcttc gttgcgcgcg ccatacagca gcacgacctc
      421 gcgcgcgcca tcggcaagga cgcggtcgag ctgcggcagc atcgcacggt acggcgcgat
      481 gccggtgccg gtcgcaatca gcaggtagcg cggctgcaca tcgttcggga gcaggcagaa
      541 acgcccgttc gggccgctgg catcgatgac gtcgccggcc tcgaggtcgg caaacaactt
      601 cgtcgccgcg cccccggtga cgtagctgac caccagctcg acgcgcgcga tcggcgaatt
      661 gccgtcgccc accgtcgcga tcgaatagct gcgcttcgcc ggcgcgccat ccgggtattt
      721 gaaatggacc tgcaagaact gccccggctt gaacaccagc ggggtaccgt cggcacgttc
      781 gaacgcgagg tggcgcacgc tgggcgccag catgcggctg tcggcgaggc ggagctggaa
      841 ggattcggcc atgggtggtt ccgggaaacg atgcgtgcgc ccggtaccac cggccgcgtg
      901 gggttgactc gctataataa gcggctcgtt tatcctcgtg cagccatgag cccggttccc
      961 gccctcgtcg tcgacaactt gcgcaagacc tacgaaggcg gcgtggaggc gctcaagggc
     1021 gtcagcttcc gcgtcgagca aggcgatttc ttcgcgctgc tggggccgaa cggcgccggc
     1081 aaatccacgc tgatcggcat cctctcctcg ctggtgaacg ccagcagcgg cgacgcgcag
     1141 atcttcggcg tgtcggtgcg caaacggcgc aacgccgcga tgcggctgat cgggctggtg
     1201 ccgcaggagc tcaacttcaa ccagttcgag aagccgttcg acatctgcgt gaacgaggcc
     1261 ggcttctacg gcatcccgcg cgccctcgcc gccgagcgcg ccgagaaata cctgaagacg
     1321 atgagcctgt gggacaaggc cgaccaggcc gcgcgccgcc tgtccggcgg catgaagcgg
     1381 cggctgatga tcgcgcgggc gatgatgaac gagcccaagc tcctgatcct cgacgagccg
     1441 accgccggcg tggacatcga gatccgccgc tcgatgtggc agttcatcga cggcatcaac
     1501 gccgccggca ccacggtcat tctcaccacg cattacctgg aggaagccga gcagctgtgc
     1561 cgcaacatcg cgatcatcga ccacggcacc atcgtggaga acacgacgat gcgcagcctg
     1621 ctggccaagc tcgacgtcga gaccttcgtg ctggacaccg ccgcgccgct cgcgacgctg
     1681 ccggcgatcg acggcctcac cctgcgccgt atcgacgagc gcacgctgga agccgcggtg
     1741 ccgcacacgc gcgacatcaa caccctgttc accgcgctca ccgcgcacgg catcaccgtc
     1801 acctcgatgc gcaacaagac caaccggctc gaagagctgt tcgtgcgcct ggtggaacac
     1861 ggccgcgacg gtgcggcgca gccgcgggcg gaagtcgtcg catgagcgaa tcctccccca
     1921 acctcatcgc actcaagacc atcgtccgcc gcgagatcgt gcgcatcctg cgcatctgga
     1981 cgcagacgct gatcccgccg gcgatcacga tgacgctgta tttcgtgatc ttcggcacct
     2041 tgatcggcag ccgcatcggc caggtcgagg gccacttcac ctacatgcag ttcatcgtgc
     2101 cgggcctggt gatgatggcg atcatcacca acagctacgg caacatcacc agctcgttct
     2161 tcggcgcgaa attcggccac tacgtggaag agatgctggt ctcgccgatg tcgccatggg
     2221 tgatgctcac cggctacgtg atcggcgcca ccgtgcgcgg gctcgcggtg ggcgtgatcg
     2281 tgctcggcat cgcgctgttc ttcacctcgc tcgacatcca gcacccgctg atcaccgccg
     2341 gctcggtcgt gctcggcgcg gtgatcttct cgctcgccgg cttcatcaac gcggtgtacg
     2401 ccaagaagtt cgacgacatc gccatcatcc ccatcttcat cctcaccccg ctcacctacc
     2461 tcggcggcgt gttctactcg atcaacatgc tcggcgagcc gtggcgcacg ctgtccaagg
     2521 ccaacccgat cctgtacatg gtcaacgcgt tccgctacgg cgtgctcggc atcagcgacg
     2581 tcaacatcgc ctggtcgttc gcggtgatgc tcggcttcgt ggcggcgctc gcggcattcg
     2641 gcctgcagct gctgaagcgt ggcgtgggcc tgcggtcgta gcgagccggc ccgcatgcgc
     2701 gtcaacaaat acatcagcga agccggcctg tgctcgcgcc gcgaggcgga tgagctgctg
     2761 ctggccgggc gcgtcaccat caacggcgaa accgtcacca ccggcgcaaa ggcgctggaa
     2821 ggcgacgagg tgcgtgtcga tggcgagatc g
//
LOCUS       DASSVL010000510         2739 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_604845, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000510 DASSVL010000000
VERSION     DASSVL010000510.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2739)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2739)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2739
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_604845"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..361)
                     /locus_tag="VFM52_08940"
     CDS             complement(<1..361)
                     /locus_tag="VFM52_08940"
                     /EC_number="2.3.1.286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003469264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070403 - NAD+ binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Sir2 family NAD-dependent protein deacetylase"
                     /protein_id="HET8765332.1"
                     /translation="MRNGAPATLSPLQAFVAGHARLFVLTGAGCSTPSGIPDYRDRNG
                     AWKRKPPITLQAFMGEAYTRARYWARSLVGWPSFGSARPNATHRALAELERHGKVDLL
                     VTQNVDGLHQRAGSRHVV"
     gene            complement(365..1426)
                     /locus_tag="VFM52_08945"
     CDS             complement(365..1426)
                     /locus_tag="VFM52_08945"
                     /EC_number="1.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016851500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent alcohol dehydrogenase"
                     /protein_id="HET8765333.1"
                     /translation="MPTIHAYGTPSASAPLGPLDIERREPGAHDVKIAIRWCGVCHSD
                     LHTVRNEWHNTLYPAVPGHEIVGDVVAVGDAVTAFKVGDTVGVGCMVDSCQHCASCEA
                     GEEQYCENGFTNTYNGRGQVNTWGGYSEHIVVRDKFVLHIHHQPEQLAAVAPLLCAGI
                     TTYSPLRHWHAGPGKKVGIVGLGGLGHMGVKLAHALGAHTVLFTTSPGKVADGRRLGA
                     DEVVISRDSAQMAQHARSFDFILDTVSAAHDLDAYLGLLGRDGTLCLVGAPATPHPSP
                     SVGQLLAGRHQIAGSMIGGIRETQEMLDFCAARNIVCDIEQIAMADINTAYERMLKRD
                     VKYRFVIDMATLNPAAKAA"
     gene            1559..2260
                     /locus_tag="VFM52_08950"
     CDS             1559..2260
                     /locus_tag="VFM52_08950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008434713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase N-terminal
                     domain-containing protein"
                     /protein_id="HET8765334.1"
                     /translation="MADLSAFPINRRWPAQHPDRLQLYSLPTPNGVKVSIMLEETGLP
                     YEVHRVDIGNDESHVPEFLALNPNGKIPAVIDPDGPGGKPLGVFESGAILMYLAEKTG
                     KFLPADPARRWETIQWLFFQMASIGPMFGQVGFFHKYAGREYEDKRPLMRYVNEAKRL
                     LGVLDGRLAGREWIMGSEYTIADISMLGWVNNLITWYGAHEIVGYDDFRHVDAWLQRG
                     LARPAVQRGLKIPER"
     gene            complement(2352..>2739)
                     /locus_tag="VFM52_08955"
     CDS             complement(2352..>2739)
                     /locus_tag="VFM52_08955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8765335.1"
                     /translation="ARETRDSPSRQAAMRQPDALRSAGFAPRADNAPRIRPVERGNTV
                     MPGPNAYRTDNYRAESAGMPNRYRPIDNGYRQPARAPRIESAPRAMPQYRAEAPRAEP
                     QRAAPRAQQAPAGGHGRGRGRNDHQD"
BASE COUNT          395 a          913 c          982 g          449 t
ORIGIN      
        1 ccaccacgtg ccggctgccg gcacgctggt gcaggccgtc gacgttctgg gtgaccagca
       61 gatccacctt gccgtgccgt tcgagttcgg ccagggcgcg atgcgtcgcg ttgggccgcg
      121 cgctgccgaa gctcggccag ccgaccaggc tgcgcgccca gtagcgcgcg cgggtgtacg
      181 cctcgcccat gaacgcctgc agcgtgatcg gcggcttgcg cttccacgcg ccgttgcggt
      241 cgcggtagtc ggggatgccg ctcggcgtgc tgcagccggc gccggtcagc acgaacaatc
      301 gtgcgtggcc ggcgacgaac gcctgcagcg gcgagagggt ggccggggcg ccgttccgca
      361 ccggtcaggc cgccttcgcc gccgggttca aggtggccat gtcgatcacg aagcggtact
      421 tcacgtcacg cttcaacatg cgctcgtagg cggtgttgat gtcggccatc gcgatctgct
      481 cgatgtcgca cacgatgttg cgcgcggcgc agaaatccag catctcctgg gtttcgcgga
      541 tgccgccgat catcgagccg gcgatctggt ggcggccggc cagcagctgc ccgaccgatg
      601 gcgaggggtg cggcgtggcc ggcgcaccga ccaggcacaa ggtgccgtcg cggccgagca
      661 acccgaggta ggcatcgagg tcgtgcgcgg ccgacaccgt gtcgaggatg aagtcgaagc
      721 tgcgcgcgtg ctgcgccatc tgcgccgaat cccgcgagat caccacctcg tccgcgccga
      781 ggcgcctgcc gtcggcgacc ttgcccggcg aggtggtgaa cagcacggtg tgcgcgccca
      841 gcgcgtgggc gagcttgacg cccatgtggc cgagcccgcc gaggccgacg atgccgacct
      901 tcttgccggg gccggcgtgc cagtggcgca gcggcgaata cgtggtgatg ccggcgcaca
      961 gcagcggcgc gaccgcggcg agctgctccg gctggtggtg gatgtgcagc acgaacttgt
     1021 cgcgcaccac gatgtgctcg gaatagccgc cccaggtgtt cacctggccg cggccgttgt
     1081 aggtgttggt gaagccgttt tcgcagtact gctcctcgcc ggcctcgcag ctggcgcagt
     1141 gctggcagct gtcgaccatg cagccgacgc ccacggtgtc gccgaccttg aaggccgtca
     1201 ctgcgtcgcc caccgcgacc acgtcgccga cgatctcatg ccccggcacc gccggataca
     1261 gcgtgttgtg ccattcgttg cgcacggtgt gcaggtcgga atggcacacg ccgcaccagc
     1321 ggatggcgat cttgacgtcg tgcgcgcccg gttcgcggcg ctcgatgtcg agcggcccca
     1381 gtggcgcgct ggcggacggg gtgccatagg cgtggatggt cggcatgctt caactcctgc
     1441 agtgcgaaca gatacggtaa agcgtacgcg ttgcggcgcg aagggaaagt tgcggcgggg
     1501 cattgaaccg gcgcgcggcg atgccatgtt tcccggatcg ttcaaggaga cccgcacgat
     1561 ggccgatttg tccgcattcc cgatcaaccg ccgctggccg gcgcagcacc ccgatcgcct
     1621 gcagctctac tcgctgccca cgccgaatgg cgtcaaggtg tcgatcatgc tggaggaaac
     1681 cggcctgccc tacgaggtgc atcgggtgga catcggcaac gacgaaagcc acgtgccgga
     1741 gttcctcgcg ctgaacccca acggcaagat cccggcggtg atcgacccgg acggccccgg
     1801 cggcaagccg ctcggcgtgt tcgagtccgg cgcgatcctg atgtacctcg cggagaagac
     1861 cggcaagttc ctgcccgccg acccggcgcg gcgctgggaa accatccagt ggctgttctt
     1921 ccagatggcg tcgatcgggc cgatgtttgg ccaggtgggt ttcttccaca aatacgccgg
     1981 ccgcgaatac gaggacaaac gtccgctgat gcgctacgtc aacgaggcga agcgcctgct
     2041 cggcgtgctc gacggccgcc tcgccggacg cgagtggatc atgggcagcg aatacaccat
     2101 cgccgacatc tcgatgctgg gctgggtgaa caacctcatc acctggtacg gcgcgcacga
     2161 gatcgttggc tacgacgact tcaggcacgt cgacgcgtgg ctgcagcgcg gtctggcgcg
     2221 cccggcggtg cagcgcgggt tgaagattcc cgagcgctga ccgcgcgccc atccggctgg
     2281 atcgcggatg gcccatgcag aacgggcccg ccatgtggcg ggcccgttcg atcgcgcgtt
     2341 gcgtccgcga ctcaatcctg gtggtcgttg cgtccgcggc cacgtccgtg tccccccgcc
     2401 ggtgcctgct gtgcgcgggg cgcggcccgc tgaggttcgg cccgcggcgc ctcggcacga
     2461 tattgcggca tggcgcgtgg tgccgactcg atgcgcggcg cgcgcgccgg ttgacggtaa
     2521 ccgttgtcga tgggccgata gcggttcggc atgccggcgc tttcggcccg gtagttgtcg
     2581 gtgcgatagg cattgggccc gggcatcacc gtgttgccgc gctcgactgg acggatgcgg
     2641 ggcgcattgt cggcgcgcgg cgcgaagccg gccgaacgca aggcatcggg ttgccgcatc
     2701 gccgcttgcc gggatgggct gtcgcgggtt tcgcgtgcc
//
LOCUS       DASSVL010000511         5323 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_181321, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000511 DASSVL010000000
VERSION     DASSVL010000511.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 5323)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5323)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5323
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_181321"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..379
                     /locus_tag="VFM52_08960"
     CDS             <1..379
                     /locus_tag="VFM52_08960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019467431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="fatty acid hydroxylase"
                     /protein_id="HET8765336.1"
                     /translation="LIDPDRPQLHNCNFGQVFSIWDVIFGTALYGEAPRPTGVGDPVV
                     DADNNCGVIGLQWVSFKRFWASVWRPAGWKLGEVAFDPVDLHPVPVSELDVHALAHHL
                     PGATPAHAAAVTPAVDGGKPATA"
     gene            complement(386..1333)
                     /locus_tag="VFM52_08965"
     CDS             complement(386..1333)
                     /locus_tag="VFM52_08965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008436921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal-phosphate dependent enzyme"
                     /protein_id="HET8765337.1"
                     /translation="MNALPDLAAIRNAAARIAPHAVVTPVLRSAALDALAGAHLHFKC
                     EQLQRGGAFKFRGACNAVWSLSDAEAAHGVVTHSSGNHGNALALAAATRGIAAHVVVP
                     EGAVKAKVDAIARAGATLHRCAPTQAAREAMCAQVQRETGATLVHPYADARVMAGQGT
                     IALELLHQVPALDAIVAPVGGGGLMSGVAVAAHALRPDIALIGAEPAGADDAARSLAA
                     GERVTSVVPQTLCDGLRALVGEPNLAALRAHHVEIVTVSDAEAIAAMRLVWSELKQVI
                     EVSSATVLAAVLKARERFAGREIGLVVTGGNVDLDALPW"
     gene            complement(1330..2328)
                     /locus_tag="VFM52_08970"
     CDS             complement(1330..2328)
                     /locus_tag="VFM52_08970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008208039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldose epimerase"
                     /protein_id="HET8765338.1"
                     /translation="MTRFQVVESLLGTEPVVQLDDTVAGRRVRIARHGAALLNLMVRE
                     GDGWFDYADGYRDAAEIVARKGSRFAVMVPFGGRIRDGRYTFDGRRHDLAPGATGDAR
                     AVRHGFVRDALFALDDRVEDEHGARVTLVTDAIRPRPGYPFAIDLTVNFALDARGLAL
                     DVAMRNVGDHAAPCFFGWHPYFRLAETTVDGWELRIPAHDVIRTSGDLIALPGAAAHV
                     AVDDAPALDFRDADAIGSRILDQGYAYLDADGDGLIRTHLRDPASGRALAVWQERGLL
                     HAFTGDTVSRDPRRAIALEPMEAMADAFSRPEWADAIRLAPGAERHFRCGVEIVTA"
     gene            2404..5055
                     /gene="pepN"
                     /locus_tag="VFM52_08975"
     CDS             2404..5055
                     /gene="pepN"
                     /locus_tag="VFM52_08975"
                     /EC_number="3.4.11.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019463959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004177 - aminopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase N"
                     /protein_id="HET8765339.1"
                     /translation="MTARTETTAVPVRLADYQPPAWHVDHVELVIDLGIDATEVAATL
                     VLRRDAAQAQPLRLDGEGLEPLALALDGQPLDDRAWRMIDGGIEIDGARDGSVLETRV
                     RLHPAANTTLEGLYLSGSCEAGFLLTQCEAQGFRHITWYPDRPDVQATFTVTLRADRA
                     RFPVLLAGGNPAGAGELADGRHWARFVDPHRKPSYLFALVAGRLEKIEQAYRTADGRD
                     VTIRVWSEANVIDRCHYAMDALVRAMRWDETTYGRNYDLDVFNVVATHDFNMGAMENK
                     GLNIFNAKCLLADPDTTTDDEYRRVESVIAHEYFHNWSGNRVTCRDWFQLSLKEGLTV
                     FREQSFSADMNSAPLKRIEDVALLRRAQFPEDAGPLAHPVRPAQYREINNFYTATVYE
                     KGAELVRMLAGRLGREGFRRGTDRYFAQNDGRSATIEDFLAALGSANDTDLTPYLAWY
                     GQSGTPRVKARGHYDAVQRTYTLTLTQHTAPTHDQARKVVLPIPVKLALFAPDGCKLA
                     LHLDGQTSAGGDEAIVVLDQPEQAFVFRDVPAAPVPSLLRGFSAPVVLDADASAADLA
                     LLLRHDNAGFNRWEASQQLAAHACRNLRDNAGDVALRAWCDTLAGLFDDAALDAALLA
                     DLLTPPGEIELAERETSVDPDAIHTLRETLLTRLATRIGRTRLDARYHALAARTSAAL
                     GATDQADRRLKQRVLQLLARLDATHACDLAEAQYRSAPGMTDRLGALAVLARHDATRG
                     AAALAHYRERYTHDPLALDKWFTLQAQLPGESALARVIALEADPAFTLKNPNRARALL
                     GGYATGNPTGFHRADGAGYRHYAARLLALDALNPQIAARLATAFNGWQRLEPRRREAA
                     RTTLETMAAHPALSRNLAEIVGNVRKG"
     gene            complement(5124..>5323)
                     /locus_tag="VFM52_08980"
     CDS             complement(5124..>5323)
                     /locus_tag="VFM52_08980"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8765340.1"
                     /translation="RRAVMNASVDFTRFFPHHDLLIEIGRIEMAMETLKGRAENERAM
                     LQPRLESRMVRLRTALQGLPA"
BASE COUNT          797 a         2024 c         1777 g          725 t
ORIGIN      
        1 gctgatcgac cccgaccgcc cgcagctgca caactgcaac ttcggccagg tgttctcgat
       61 ctgggacgtg atcttcggca ccgcgctgta tggcgaggcg ccgcgcccga ccggcgtcgg
      121 cgacccggtc gtcgacgccg acaacaactg cggcgtgatc ggcctgcagt gggtgtcgtt
      181 caagcgcttc tgggcgtcgg tgtggcgtcc ggcgggctgg aaactcggcg aggtggcgtt
      241 cgacccggtc gacctgcacc cggtgccggt cagcgagctg gacgtgcatg cgttggcgca
      301 tcacctaccg ggcgcgacgc cggcgcatgc cgccgcggtc acgccggcgg tggacggcgg
      361 caagccggct accgcctgag cgggttcacc acggcagcgc gtcgagatcg acgttgccgc
      421 cggtcacgac caggccaatc tcgcgaccgg caaagcgttc gcgcgccttg agcacggccg
      481 ccagcacggt ggcgctcgac acttcgatca cctgcttcag ctcgctccac accaggcgca
      541 tggcggcgat cgcctcggca tcgctcacgg tgacgatctc gacgtggtgc gcgcgcagcg
      601 ccgcaaggtt cggctcgccg accagcgcac gcaggccgtc gcaaagggtc tgcggcacca
      661 cgctggtcac ccgctcgccg gccgcgagcg aacgcgccgc gtcgtcggca cccgccggct
      721 cggcaccgat cagcgcgata tccgggcgca gcgcgtgcgc cgccaccgcg acgccgctca
      781 tgagcccacc accgccgacc ggcgcgacga tcgcatcgag tgccggcacc tggtgcagca
      841 gttccagcgc gatcgtgccc tgccccgcca tcacccgcgc atcggcatac ggatgcacca
      901 gcgtggcgcc agtctcccgc tgcacctgcg cgcacatcgc ctcgcgcgcg gcctgggtcg
      961 gcgcacagcg gtgcagggtg gcgccggcgc gggcgatcgc gtcaaccttg gccttgaccg
     1021 cgccttccgg caccacgacg tgcgcggcga tgccgcgcgt tgcggcggcc agcgccagcg
     1081 cgttgccgtg gttgccggag gaatgcgtca ccacgccatg cgcggcctcg gcatcgctga
     1141 gcgaccacac cgcattgcac gcgccgcgga acttgaacgc gccgccgcgc tgcagctgct
     1201 cgcacttgaa gtgcaggtgc gcgccggcca gtgcgtccag cgccgcactg cgcagcaccg
     1261 gggtcaccac cgcatgcggc gcgatgcgcg cggcggcgtt gcggatcgcg gccagatcag
     1321 gcagggcgtt catgcggtca cgatctccac gccacaacgg aaatgccgct ccgcgcccgg
     1381 cgccagccgg atcgcatcgg cccattccgg ccggctgaac gcgtcggcca tggcttccat
     1441 cggctccagc gcgatcgcac gccgcgggtc gcggctcacg gtgtcgccag tgaaggcgtg
     1501 cagcagcccg cgctcctgcc acaccgccag cgcgcggccg ctggccgggt cgcgcaggtg
     1561 ggtgcggatc aggccgtcgc cgtccgcgtc gaggtaggcg tagccctggt cgaggatgcg
     1621 gctgccgatc gcgtccgcgt cgcggaaatc cagcgccggc gcatcatcca ccgcgacgtg
     1681 cgcggcggcg ccgggcagcg cgatcaggtc gccgctggtg cggatcacgt cgtgggcggg
     1741 aatgcgcagc tcccagccgt cgacggtggt ttcggccagc cggaaatacg ggtgccagcc
     1801 gaagaagcac ggtgccgcgt ggtcgccgac gttgcgcatc gcgacgtcga gcgcgagccc
     1861 gcgcgcgtcg agcgcgaagt tcaccgtgag atcgatcgcg aacgggtagc cgggacgcgg
     1921 ccggatcgcg tcggtcacca gcgtcacccg cgcgccgtgc tcgtcctcga cgcggtcgtc
     1981 gagcgcaaac agcgcgtcgc gcacgaaacc gtggcgcacc gcgcgcgcgt cgcccgtcgc
     2041 gccgggcgcg aggtcgtgac gccggccgtc gaacgtgtag cgcccgtcgc ggatgcgccc
     2101 gccgaacggc accatcaccg cgaaccgcga gcctttgcgg gcgacgatct cggcagcatc
     2161 gcgatagcca tcggcatagt cgaaccagcc gtcgccttcg cgcaccatga ggttcagcag
     2221 cgcggcgccg tgccgcgcga tgcgcacgcg gcgcccggcc acggtgtcgt ccaactgcac
     2281 caccggctcg gtgccgagca ggctttcgac cacctggaaa cgcgtcatgg cttgactccg
     2341 tgcaaacgtc ggcaaaggcc ttgcatggta gcctgatccg tcccctcccc cgacgttttc
     2401 gccatgactg ctcgcaccga aaccactgcc gttcctgttc gcctggccga ctatcagccg
     2461 cccgcatggc acgtggatca tgtggagctg gtgatcgacc tcggcatcga cgccaccgaa
     2521 gtcgcggcaa cgctcgtgct gcgccgcgat gccgcgcagg cgcagccgct gcgcctggat
     2581 ggcgagggcc tcgaaccgct ggcgctggcg ctcgacggcc agccgctgga cgaccgtgcc
     2641 tggcgcatga tcgacggcgg catcgagatc gacggcgcgc gcgacggcag cgtgctggaa
     2701 acccgcgtgc gcctgcaccc ggcggcgaac accacgctcg agggcctgta cctttccggc
     2761 agctgcgaag ccggtttcct gctgacccaa tgcgaggcgc agggcttccg ccacatcacc
     2821 tggtacccgg atcgcccgga cgtgcaggcc acgttcaccg tgaccctgcg cgccgaccgc
     2881 gcgcgtttcc cggtgctact cgccggtggc aaccccgctg gcgccggcga gctcgcggac
     2941 ggccgccact gggcgcgctt cgtcgacccg caccgcaagc cgagctacct gttcgcgctg
     3001 gtcgccgggc gcctggaaaa gatcgagcag gcctaccgca ccgccgacgg ccgcgacgtc
     3061 accatccgcg tgtggtcgga ggcgaacgtg atcgaccgct gccactatgc gatggacgcg
     3121 ctggtgcgcg cgatgcgctg ggacgagacg acctacggcc gcaactacga cctcgacgtg
     3181 ttcaacgtcg tcgccaccca cgacttcaac atgggcgcga tggagaacaa gggcctcaac
     3241 atcttcaacg cgaagtgcct gctggccgac ccggacacca ccaccgacga cgaataccgc
     3301 cgcgtcgagt cggtgatcgc gcacgagtac ttccacaact ggagcggcaa ccgcgtcacc
     3361 tgccgcgact ggttccagct gtcgttgaag gaagggctga ccgtgttccg cgagcagagc
     3421 ttctcggccg acatgaactc ggcgccgctc aagcgcatcg aggacgtcgc gctgctgcgc
     3481 cgcgcgcagt tccccgagga cgccggcccg ctcgcccacc cggtgcgccc cgcgcagtac
     3541 cgcgagatca acaacttcta caccgcgacc gtgtacgaga agggcgccga gctggtgcgc
     3601 atgctcgccg gccggctcgg ccgcgagggc ttccgccgcg gcaccgaccg gtacttcgcg
     3661 cagaacgacg gccgctcggc gacgatcgag gatttcctcg ctgcgctcgg cagcgcgaac
     3721 gataccgacc tcacgccata cctcgcgtgg tatggccagt ccggcacgcc gcgcgtcaag
     3781 gcgcgcggcc actacgatgc cgtgcagcgc acctacacgc tgacgctcac ccagcacacc
     3841 gcgcccaccc acgaccaggc ccgcaaggtg gtgctgccga tcccggtcaa gctcgcgctg
     3901 ttcgcgccgg acgggtgcaa gctggcgctg catctggacg gccagacgtc cgccggcggc
     3961 gacgaggcca tcgtcgtgct cgaccagccc gagcaggcct tcgtgttccg cgacgtgccg
     4021 gcggcgccgg tgccgtcgct gttgcgcggc ttctccgcac cggtggtgct ggacgccgat
     4081 gccagcgccg ccgatctcgc gctgctgctg cgccacgaca acgcgggctt caaccgctgg
     4141 gaagccagcc agcagctcgc cgcgcacgcc tgccgcaacc tgcgcgacaa cgccggagac
     4201 gtcgcgctgc gcgcctggtg cgacacgctg gccgggttgt tcgacgacgc cgcgctcgac
     4261 gcggccctgc tcgccgacct gctcaccccg cccggcgaaa tcgaactggc cgaacgcgag
     4321 accagcgtcg acccggacgc catccacacc ctgcgcgaga ccctgctgac gcggctcgcc
     4381 acgcgcatcg gccgtacgcg actggatgcg agataccacg cactcgccgc gcgcaccagc
     4441 gcggcgctgg gcgcgacgga ccaggccgac cgccggctga aacaacgcgt gctgcagctg
     4501 ctcgcgcggc tcgatgcgac ccacgcctgc gacctcgccg aggcgcaata ccgcagcgcc
     4561 cccggcatga ccgaccgcct cggcgccctc gccgtacttg cccgccacga cgccacgcgc
     4621 ggtgcggcgg cgctcgcgca ctatcgcgag cgatacacgc acgatccgct cgccctcgac
     4681 aagtggttca cgctgcaggc gcagctgccc ggcgagagcg cgctcgcgcg cgtcatcgca
     4741 ctcgaggccg atcccgcgtt cacgctgaaa aacccgaatc gtgcgcgtgc cctgctcggc
     4801 ggctacgcca ccggcaaccc gaccggtttc catcgcgccg acggggccgg ctaccggcac
     4861 tatgccgctc gcctgctcgc gctggatgcg ctgaacccgc agatcgcggc gcgccttgcc
     4921 accgccttca acggctggca gcggctcgaa ccgcgacgcc gcgaagcggc acgcacgacg
     4981 ctggaaacca tggctgccca tcccgccctg tcgcgcaacc tcgccgagat cgtcggcaac
     5041 gtgcgcaagg gctgactccc aggtgcggca gcctcgcgct gccgcctggc ctcaccgggg
     5101 ccgcatcgcg gccccgcacc gtatcacgcc ggcaagccct gcaatgcggt gcgcaggcgc
     5161 accatgcgcg actccagccg cggctgcagc atcgcgcgtt cgttctcggc ccgccccttc
     5221 agggtctcca tcgccatctc gatgcgaccg atctcgatca gcaggtcgtg gtgcggaaag
     5281 aacctggtga agtcgacgct ggcgttcatg actgctctcc gat
//
LOCUS       DASSVL010000512         2166 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_505893, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000512 DASSVL010000000
VERSION     DASSVL010000512.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2166)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2166)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2166
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_505893"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..513)
                     /locus_tag="VFM52_08985"
     CDS             complement(<1..513)
                     /locus_tag="VFM52_08985"
                     /inference="COORDINATES: protein motif:HMM:NF016143.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="neutral zinc metallopeptidase"
                     /protein_id="HET8765341.1"
                     /translation="MRWEGERQSSNVEDRRDDDGGGGGGFGFGGRSIGLGSIVIALVG
                     GWIFGVNPLTILGLMSGGGTGTAVHAPAPAHAPPSGDRQAAFVSTVLASTEDVWPQVL
                     GDRYVPPKLVLYRGSTPTGCGQGQAAMGPFYCPVDRKVYLDLDFFDVMAHRLGAPGQF
                     AQAYVVAHEVG"
     gene            complement(623..1192)
                     /gene="dcd"
                     /locus_tag="VFM52_08990"
     CDS             complement(623..1192)
                     /gene="dcd"
                     /locus_tag="VFM52_08990"
                     /EC_number="3.5.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000985727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008829 - dCTP deaminase activity
                     [Evidence IEA];
                     GO_process: GO:0009394 - 2'-deoxyribonucleotide metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dCTP deaminase"
                     /protein_id="HET8765342.1"
                     /translation="MSIKSDNWIRRMAEQHGMIEPFEPGQVRQSPDGHRIVSYGTSSY
                     GYDIRCAPEFKVFTNIHSTVVDPKNFDEKSFVDIESDVCIIPPNSFALARTVEYFRIP
                     RNVLTICLGKSTYARCGIIVNVTPFEPEWEGYVTLEFSNTTPLPAKIYAGEGCAQVLF
                     FESDEVCETSYKDRGGKYQGQRGVTLPKT"
     gene            complement(1250..>2166)
                     /gene="apbC"
                     /locus_tag="VFM52_08995"
     CDS             complement(1250..>2166)
                     /gene="apbC"
                     /locus_tag="VFM52_08995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007512921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="iron-sulfur cluster carrier protein ApbC"
                     /protein_id="HET8765343.1"
                     /translation="AEIKAALEADAGIAQAVVSVTSRVATHKVQGNLMPLPGVKNIIA
                     VASGKGGVGKSTVAVNLALALAAEGANTGVLDADIYGPSQPRMLGIEGKPESPDGKSI
                     IPMTNHGVQVMSIGFLVGEDTPMVWRGPMVTQALTQLLNSTRWKDIDYLIVDMPPGTG
                     DIQLTLTQRVPVAGAVIVTTPQDIALLDAKKGLKAFEKVQVPVLGIIENMATHICSNC
                     GHEEHIFGEGGGARMAAQYGVPLLGSLPLDIRIREQADGGNPTVVADPESDLALRYRE
                     IARNTAARLSLLAERDMTGVPNIRILDD"
BASE COUNT          331 a          740 c          730 g          365 t
ORIGIN      
        1 gcccacctcg tgcgccacca cgtaggcctg cgcgaactgg cccggcgcgc ccaggcggtg
       61 ggccatcacg tcgaagaagt cgaggtccag gtagaccttg cggtcgaccg ggcagtagaa
      121 cggacccatg gccgcctggc cctggccgca gccggtgggc gtgctgccgc ggtagagcac
      181 cagcttcggc ggcacgtagc ggtcgcccag cacctgcggc cagacgtcct cggtgctggc
      241 cagcacggtg ctgacgaagg cggcctgccg gtcgcccgac ggcggggcat gggccggggc
      301 cggcgcatgc accgccgtgc cggtgccccc gccgctcatc aggccgagga tcgtcagcgg
      361 gttgacgccg aagatccagc cgccgaccag ggcgatgacg atcgaaccca ggccgatgga
      421 gcggccgccg aagccgaagc ccccgccgcc gccgccgtcg tcatcgcgac ggtcctccac
      481 gttcgaactc tggcgttcac cttcccagcg catggttgat cctcgtggcg tgcaacgaag
      541 gcgcaaccgt acaccggcgc acgcccaccc gcagggcaag cggcgttccg ggggtggacg
      601 ggcgggaagc cggccgggcg gctcaggtct tgggcagcgt caccccgcgc tggccctggt
      661 acttgccgcc gcggtccttg tagctggtct cgcagacctc gtcgctctcg aagaacagca
      721 cctgcgcgca gccctcgccg gcgtagatct tggccggcag cggggtggtg ttgctgaact
      781 ccagcgtcac gtagccctcc cactcgggct cgaagggcgt gacgttgacg atgatcccgc
      841 agcgggcgta ggtgctcttg cccaggcaga tggtgagcac gttgcgcggg atgcggaagt
      901 actccaccgt gcgcgccagc gcgaagctgt tgggcgggat gatgcagacg tcggactcga
      961 tgtcgacgaa gctcttctcg tcgaagttct tcgggtcgac caccgtgctg tggatgttgg
     1021 tgaacacctt gaattcgggc gcgcagcgga tgtcgtagcc gtagctggag gtgccgtagc
     1081 tgacgatgcg gtgcccgtcg ggcgactggc gcacctgccc cggctcgaac ggctcgatca
     1141 tcccgtgctg ctcggccatg cggcgaatcc agttgtcgct cttgatgctc attgcacgct
     1201 gcgccacgcc aaacaaactg ccaagcctaa cggcacatgg cgcgcggctt caatcatcga
     1261 ggatgcggat gttgggcacg cccgtcatgt cgcgttcggc gagcagcgac aaccgcgccg
     1321 cagtgttgcg cgcaatctcg cgatagcgca gcgcgaggtc ggattcggga tcggccacga
     1381 ccgtcgggtt gccgccgtcg gcctgctcgc ggatgcgaat atccagcggc agcgagccca
     1441 gcaacggcac gccgtactgc gcggccatcc gcgcgccgcc accttcgccg aagatgtgct
     1501 cttcgtggcc acaattcgag cagatgtgcg tcgccatgtt ctcgatgatg ccgagcaccg
     1561 gcacctgcac cttctcgaac gccttcaagc ccttcttggc gtccagcagc gcgatgtcct
     1621 ggggcgtggt gacgatgacc gcgccggcga ccggcacgcg ctgggtgagc gtcaactgga
     1681 tgtcgccggt gccgggcggc atatcgacga tcaagtaatc gatgtccttc cagcgagtcg
     1741 agttcaagag ctgcgtcagc gcctgggtca ccatcggccc gcgccacacc atcggcgtgt
     1801 cctcgcccac caggaacccg atcgacatca cctgcacgcc gtggttggtc attgggatga
     1861 tcgacttgcc gtccggtgat tcgggcttgc cttcgatgcc gagcatccgt ggctggctcg
     1921 gcccgtagat gtcggcgtcc agcacgccgg tgttggcgcc ttccgccgcc agcgccagcg
     1981 caaggttcac ggcgaccgtc gatttgccta cgccgccctt gcccgaggcg accgcgatga
     2041 tgttcttgac gcccggcagc ggcatcaggt tgccctgcac cttgtgggtc gcgacgcgcg
     2101 aggtcacgga aaccacggcc tgcgcgattc ccgcgtcggc ctccaatgct gccttgattt
     2161 cagcgg
//
LOCUS       DASSVL010000513         2756 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1297216,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000513 DASSVL010000000
VERSION     DASSVL010000513.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2756)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2756)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2756
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1297216"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..395
                     /locus_tag="VFM52_09000"
     CDS             <1..395
                     /locus_tag="VFM52_09000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008209216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="glycosyl hydrolase family 18 protein"
                     /protein_id="HET8765344.1"
                     /translation="RAVRQFLAAGVPAAKLVPGIAFYGREFAGVDPAHDGLYQRYGKF
                     VGMADWRKLKADYIGRNGYVRRWDAQAQAPYLWNAQTRHFVTYDDPQSIAAKAAYVKA
                     QHLGGLMYWVQDSDDHGELLHAVWQGLQ"
     gene            complement(409..485)
                     /locus_tag="VFM52_09005"
     tRNA            complement(409..485)
                     /locus_tag="VFM52_09005"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(449..451),aa:Arg,seq:cct)
     gene            590..2125
                     /locus_tag="VFM52_09010"
     CDS             590..2125
                     /locus_tag="VFM52_09010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014507550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HET8765345.1"
                     /translation="MSQNILSALGLSSSNPGTYLGNGEWSATTDAGTLSPVNPATGEV
                     IASVHASSAADYAKLMERAQAAFEIWHATPAPQRGQAIRLCADALRKHKHALGSLVAL
                     EMGKIKPEGNGEVQEMIDIADFAVGQSRMLYGNTMHSERPGHRMYEQWHPLGLVGIIS
                     AFNFPVAVWSWNAFIAAVCGDVCIWKPSPKTPLSAIAALRICNDALKAGGFPDIFFLF
                     NDAGTDLSQAFVDDPRIALVSFTGSTKVGRHIGERVARRLGRSLLEMGGNNAIILDQS
                     ADLKLAIPAIVFGAVGTAGQRCTTTRRLIVHESIIEDVVQKLTAAYKQIETKIGDPTD
                     AKTLMGPLNSADAVKAYLGAIEQVKQAGGVVVTGGKALTERKGFFVLPTIVRGVKNAA
                     EVVQTETFAPILYVMPFKTLDEAIAMQNGVPQGLSAAIFTQDLKATEQYLATGGADCG
                     IANVNIGTSGAEIGGAFGGEKDTGGGRESGSTAWQAYMRRQTNTINYSNALPLAQGIK
                     FDL"
     gene            2146..2451
                     /locus_tag="VFM52_09015"
     CDS             2146..2451
                     /locus_tag="VFM52_09015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011036963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4190 domain-containing protein"
                     /protein_id="HET8765346.1"
                     /translation="MNQPLPIARTTSSLAIASLVLGVLAWCMLPFVGAVAAVVCGHLA
                     RGEIRHAPPGSVDGGGLAVTGMVLGYVQLALTAVGLFLLVAFVMFGLGIGVHYLPWH"
     gene            2442..>2756
                     /locus_tag="VFM52_09020"
     CDS             2442..>2756
                     /locus_tag="VFM52_09020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008214654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HET8765347.1"
                     /translation="MALTAGAPTLDFRGWRVAIAGGSKGIGRAMALGFAHAGAAVSVC
                     ARGATALAHVHDELLATGQAVHAVVCDLADPTAVTGWIDATAAALGGLDVLVNNASGY
                     GFD"
BASE COUNT          451 a          931 c          947 g          427 t
ORIGIN      
        1 cgcgcgcggt gcgccagttc ctcgccgccg gcgtgccggc cgcgaagctg gttcccggga
       61 ttgccttcta cggccgcgaa ttcgccgggg tcgatccggc gcacgacggc ctgtaccagc
      121 gctacggcaa gttcgttggc atggcggact ggcgaaaact gaaagccgac tacatcggcc
      181 gcaacggcta cgtgcgccgc tgggatgccc aggcgcaggc gccgtacctg tggaatgcgc
      241 agacccggca cttcgtcacc tatgacgacc cgcaatccat tgccgccaag gccgcctacg
      301 tcaaggcgca gcatctgggc ggcctgatgt actgggtgca ggacagcgac gaccacggcg
      361 agctgctgca cgcggtatgg caagggctgc aatgacgccg tgcgcgattg gtgcccccgg
      421 cgcgatttga acgcgcgacc ttccccttag gagggggacg ctctatccag ctgagctaca
      481 ggggcaagcc gcaaattctg gcatggaatg cggcactgcg cgaaccggtg acttggaggc
      541 cgctgataga atggcggttt cggggtttca cgttttcgcg gagtcaagca tgtcccagaa
      601 catcctcagc gcgctcggcc tttccagcag caatccgggc acttatctcg gcaacggcga
      661 gtggtcggcc accaccgacg ccggcacgct ttcgccggtg aatccggcga ccggcgaggt
      721 catcgccagc gtgcacgcgt cgagcgcggc ggattacgcc aagctgatgg agcgcgcgca
      781 ggcggcgttc gagatctggc acgccacacc ggcgccgcag cgtggccagg ccatccgcct
      841 gtgcgccgac gcgctgcgca agcacaagca cgcgctcggc tcgctggtcg cgctggagat
      901 gggcaagatc aagcccgagg gcaacggcga agtgcaggag atgatcgaca tcgcggattt
      961 cgcggttggc cagagccgca tgctgtacgg caacaccatg cactcggagc ggccggggca
     1021 ccgcatgtac gagcagtggc acccgctcgg cctggtcggc atcatcagcg cgttcaattt
     1081 cccggtcgcg gtgtggtcgt ggaatgcgtt catcgccgcg gtgtgcggcg acgtgtgcat
     1141 ctggaagccg tcgccgaaga cgccgctgtc ggcgatcgcg gcgctgcgca tctgcaacga
     1201 cgcgctgaag gccggcggct tcccggacat cttcttcctg ttcaacgacg ccggcaccga
     1261 cctctcgcag gcgtttgtcg acgacccgcg catcgcgctg gtgagcttca ccggttcgac
     1321 caaggtcggc cgccacatcg gcgagcgcgt tgcgcgccgg ctcggtcgct cgctgctgga
     1381 aatgggcggc aacaacgcga tcatcctcga ccagagcgcc gacctgaaac tcgcgatccc
     1441 ggcaatcgtg ttcggcgccg tcggcaccgc cggccagcgc tgcaccacga cgcggcggct
     1501 gatcgtgcac gagtcgatca tcgaggacgt ggtgcagaag ctcaccgccg cgtacaagca
     1561 gatcgaaacc aagatcggcg acccaaccga tgccaagacg ctgatggggc cgctgaacag
     1621 cgccgacgcg gtcaaggcct atctcggcgc gatcgagcag gtgaagcagg ccggcggcgt
     1681 ggtggtcacc ggcggcaagg cactcaccga gcgcaagggt ttcttcgtgc tgccgaccat
     1741 cgtgcgcggg gtgaagaacg ccgccgaggt ggtgcagacc gagaccttcg cgccgatcct
     1801 ctacgtgatg ccgttcaaga ccctggacga agccatcgcg atgcagaacg gcgtgccgca
     1861 aggcctgtcc gcggccatct tcacccagga cctcaaggcc accgagcagt acctggcgac
     1921 cggcggcgcg gattgcggca tcgccaacgt caacatcggc acctcgggcg ccgagatcgg
     1981 cggcgccttc ggcggcgaga aggacaccgg cggcggccgc gaatccggct ccaccgcgtg
     2041 gcaggcgtat atgcgccggc agaccaacac gatcaactac tccaacgcgt tgccgctggc
     2101 gcagggcatc aagttcgacc tgtaacgctg tccgcagggg gtgccatgaa ccagccattg
     2161 cccatcgccc gcaccaccag cagcctcgcc atcgccagcc tcgtgctggg ggtgctggca
     2221 tggtgcatgt tgccgttcgt cggcgccgtg gccgcggtgg tctgcgggca cctggcacgc
     2281 ggggagattc gccacgcgcc accgggcagc gtcgacggcg gcggcctggc agtgaccggc
     2341 atggtgctcg gctacgtgca actggcgctc accgccgtcg ggctgttcct gctggtggct
     2401 ttcgtgatgt tcgggctcgg catcggcgtg cattacctgc catggcattg actgccggcg
     2461 cgccaacgct ggattttcgc ggctggcgcg tcgcgatcgc cggtggcagc aagggcatcg
     2521 gccgtgcgat ggcgctcggc tttgcccacg ccggcgcggc ggtgtcggtc tgcgcgcgcg
     2581 gcgccacggc cctggcgcac gtccacgacg agctgctggc aaccggccag gcggtgcatg
     2641 ccgtcgtgtg cgacctggcc gacccgaccg cggtcaccgg ctggatcgac gcgacggccg
     2701 ccgccctcgg cgggctcgac gtgctggtga acaacgccag cggctacggc ttcgac
//
LOCUS       DASSVL010000514         2678 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_379058, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000514 DASSVL010000000
VERSION     DASSVL010000514.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2678)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2678)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2678
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_379058"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            207..842
                     /locus_tag="VFM52_09025"
     CDS             207..842
                     /locus_tag="VFM52_09025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007804564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HET8765348.1"
                     /translation="MKPVIAVWVGLAVAVTGIWTPGGAAWADGPFGIDHRVAVDNHGI
                     WERSRQQQVLAATVVVAIGGAFALGDHDKLGDTFWRSVDSLAMSSALAQGGKWVFQRE
                     RPSQTADPGKFFQGFHAESFPSGEVSAIAGAVTPFVVAYGSEHPAVYALELLPAYDAV
                     ARVKTRGHWESDVIAGWALGTAVGIWAANRQSPLILGWLPGGFQVGFIHRF"
     gene            891..2027
                     /locus_tag="VFM52_09030"
     CDS             891..2027
                     /locus_tag="VFM52_09030"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 9 protein"
                     /protein_id="HET8765349.1"
                     /translation="MNRFDAIQRLRRRVSARLVGSMLRDTDGAAPPLPRRGIHRILIC
                     RSIRTLGNSLTLTPLVQELARVYPGAEVDVVSRSKVARELFGGFANVRDLWVLPQHMP
                     GHAVATFTTFHRMRRKLYDLAIDPDPRSQSGRLMLAIAHERWALGYVGDGKRGAVTHG
                     VAVPAEVRHKAMLPVYLLRQALGENPTGAPFPQPRLPLAASELEAGWHDASRVLAAHP
                     GAGPRIAVFANATGDKLLPLAWWQAFLATFKAAVPNARIVELVPASGRSMLADAYPAY
                     FTSDVRRLAAFIANMDACIATDSGVMHLAWASGTPTLGVFSVTDPAQWGPFGGGHAAL
                     HVAGRTPQEAAGLGVEWWRQAASLQGAAAEWADAAPVSHAGPVM"
     gene            2087..>2678
                     /gene="phoB"
                     /locus_tag="VFM52_09035"
     CDS             2087..>2678
                     /gene="phoB"
                     /locus_tag="VFM52_09035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002806631.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA];
                     GO_process: GO:0006796 - phosphate-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate regulon transcriptional regulator
                     PhoB"
                     /protein_id="HET8765350.1"
                     /translation="MPKRILIVEDEASIREMVAFALRRAEMEPLHAADAHAALVAIAD
                     RPPDLILLDWMLPGLSGLELARRLRQDAGTAEIPIIMLTARGEEVDRVSGLEAGVDDY
                     VVKPFSTRELLARIKAVLRRTQADGGTGSLEVGGLRIDGLAHRVYAGDAKVEIGPTEY
                     RLLHFFMTHAERVYTRSQLLDHVWGGGVYVEERTVDV"
BASE COUNT          372 a          914 c          972 g          420 t
ORIGIN      
        1 gggcgagggt ggctcgcaac cggtcggagt cttcgatcaa gagcagtttc atgccgcacg
       61 caaccggatg gatggcgggt cgaagctagc accgcggcgc cgatcgggcc acccggtaac
      121 cgcttggaat ccggcgcggt cgctgcataa gcgcatgcta agcgtgccgg cgcacgctgg
      181 cggctggcgt ccacggggat cgagccatga aacctgtcat tgcggtgtgg gtcgggttgg
      241 cggtggccgt caccgggatc tggacgccag gcggcgcggc gtgggccgac ggcccgttcg
      301 gcatcgacca tcgggtggcg gtggacaacc acggcatctg ggagcgcagc cgccagcagc
      361 aggtgctggc ggccaccgtc gtggtggcga tcggcggggc ctttgcgctg ggtgaccacg
      421 acaagctcgg cgataccttc tggcgctcgg tggattcgct ggcgatgtcg tccgcgctgg
      481 cgcaaggcgg caagtgggtg ttccagcgcg agcggccatc gcagactgcc gaccccggca
      541 aattcttcca gggcttccac gccgagagct tccccagtgg cgaggtcagc gcgatcgccg
      601 gtgcggtgac gccgttcgtg gtggcgtatg gcagcgagca cccggcggtg tatgcgctgg
      661 aactgctgcc ggcgtacgac gccgtggcgc gggtgaagac gcgcggccac tgggaaagcg
      721 acgtgatcgc cggctgggcg ctgggcaccg cggtcggcat ctgggcggcg aatcgccaat
      781 cgccactgat cctcggttgg ctgcccggcg gcttccaggt gggcttcatc catcgctttt
      841 gagcgggcga agtggcacag tcgcccgcca gcttccggtc gagacccgcc ttgaaccgct
      901 tcgatgccat ccagagactg cgccgccggg tatccgcgcg gctggtcggc agcatgttgc
      961 gcgacaccga tggcgcggcg ccgccgctgc cgcgccgcgg catccaccgc atcctgatct
     1021 gccgcagcat ccgcacgctt ggcaactcgc tcacgctgac gccgctggtg caggagctgg
     1081 cgcgggttta cccgggcgcc gaggtggacg tcgtcagccg cagcaaggtg gcgcgcgaac
     1141 tgttcggcgg ctttgccaac gtgcgcgacc tgtgggtgtt gccgcagcac atgccgggcc
     1201 acgcggtggc cacgttcacc acgttccacc gcatgcggcg caagctgtac gacctggcca
     1261 tcgatcccga tccgcgctcg cagtccgggc gcctgatgct ggcgatcgcg cacgagcgct
     1321 gggcgctcgg ctatgtcggc gacggcaagc gcggcgcggt cacgcatggc gtcgcggtcc
     1381 cggccgaagt gcgccacaag gcgatgctgc cggtgtacct gctgcgccag gcgctgggtg
     1441 aaaaccccac cggggcgccg tttccgcagc cgcgcctgcc gctggccgca agcgagctgg
     1501 aggccggctg gcacgacgcg agtcgcgtgc tggcggcgca tcccggggcc ggcccgcgca
     1561 tcgcggtgtt cgcaaacgcc accggcgaca agctgctgcc gctcgcctgg tggcaggcgt
     1621 tccttgcgac attcaaggcg gcggtgccga atgcgcgcat cgtggagctg gtgccggcgt
     1681 ccggccgctc gatgctggcg gacgcgtacc ccgcgtactt caccagcgac gtgcgccgcc
     1741 tcgccgcgtt catcgccaac atggacgcct gcatcgccac cgacagcggc gtgatgcacc
     1801 tggcctgggc cagtggcacg ccgacgctgg gcgtgttctc ggtcaccgac ccggcgcagt
     1861 gggggccgtt cggcggcggt catgccgcgc tgcacgtggc gggccgcacg ccgcaggaag
     1921 cggccgggct gggcgtggag tggtggcggc aggcagcgtc gctgcaaggg gctgccgccg
     1981 agtgggcgga cgctgcgccg gtttcccacg ccgggcctgt catgtagttg tcatctccgc
     2041 cggctgcaat actcgccgac attcccgcag gtatcgcgca agcctcatgc ccaaacgcat
     2101 cctgatcgtc gaagacgagg cctccatccg cgagatggtc gcctttgcgc tgcgccgcgc
     2161 cgagatggaa ccgctgcatg ccgccgacgc ccatgcggcg ctggtcgcca tcgcggatcg
     2221 tccgcccgac ctcatcctgc tcgactggat gctgcccggc ctgtccggcc tcgagctcgc
     2281 gcgccgcttg cgccaggatg cgggcacggc ggaaatcccg atcatcatgc tgaccgcgcg
     2341 cggcgaagaa gtggatcgcg tcagcgggct cgaggccggc gtcgacgact acgtggtgaa
     2401 gccgttttcc acccgcgagc tgctggcacg gatcaaggcg gtgctgcgtc gcacgcaggc
     2461 cgacggcggc accggttcgc tcgaggtcgg cggcctgcgc atcgacggcc tggcgcaccg
     2521 cgtgtatgcg ggcgatgcca aggtcgagat tggccccacc gaataccgcc tgctgcattt
     2581 cttcatgact cacgccgaac gcgtctacac gcgcagccag ctgctcgatc acgtctgggg
     2641 cggcggcgtc tacgtcgagg agcgcacggt cgacgtgc
//
LOCUS       DASSVL010000515         3425 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_958102, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000515 DASSVL010000000
VERSION     DASSVL010000515.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3425)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3425)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3425
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_958102"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..771
                     /locus_tag="VFM52_09040"
     CDS             <1..771
                     /locus_tag="VFM52_09040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8765351.1"
                     /translation="RGSITLLRAGDFKGLWKHNLPAADYATLRTSWGRDHAGAPPLSD
                     ADRARFNLVVHELTAPNAESTLDAMVEPQLAQLSQRYHDQLPIMVKLGGAVLKNGLEQ
                     NPRLDADQKTQAASLIDVLTPWAAQAPWLDQATAKRAVRVLVATARKLDLTSPEDLRD
                     AGFDASMGRLNVGYRGARRLLALYGLPLDAALDSARVSVASNDGTHAVVKVDYTLLGH
                     PLTTTTTLVREDGRWYSAAMLAAARQPATPVAVATAPF"
     gene            843..>3425
                     /gene="plsB"
                     /locus_tag="VFM52_09045"
     CDS             843..>3425
                     /gene="plsB"
                     /locus_tag="VFM52_09045"
                     /EC_number="2.3.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017463008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004366 - glycerol-3-phosphate
                     O-acyltransferase activity [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate 1-O-acyltransferase PlsB"
                     /protein_id="HET8765352.1"
                     /translation="MRPMSHADSSHRRAPWWFGLAGQLLQPWVRLRRDPAEPASLLKA
                     DAPVCYVIERNGFSDALILDRACREAGLPSPMQPLAGTRRRRSVFALMRRDGWLFGRK
                     RHRKLGVAVAQLTHALEGAGERDIQIVPVSIFVGRAPNRESGWFSVLFSENWVMVGRF
                     RRMLALLLNGRDTVVHFSEPVSLRAVLAESRELPPPRLARKLARVLRTHFRRIRAAVI
                     GPDLSHKRTMVDDVLRAEPVRAAIAATAAKEKTSEARVWRRARKMMLEIAADYSHPVV
                     RSVSFLLRNFWNKLYDGIAMHHFDKARAAAPGFEVVYVPSHRSHADYLLLSYQLHMSG
                     VVPPHIAAGINLNLPLIGPLLRRGGAFFMRRTFKGNALYSVLFNEYMAKLIDRGVPME
                     YFIEGGRSRTGRLLAPRAGMLVMTMRAFLRAPRRPVLFQPVYIGYERLMEGKSYAGEL
                     SGQAKEKESLFGLLKGLKVLRKRYGMVTINFGEPIELTPLLDAASPDWRSAGNEPEVR
                     PEWMSAAIDDLAHRIQININRAADVNPINLLALTLLATPKHAMAETDLLAQLEVTKSL
                     LQELPYSDRITLTPMNPAGIIAHGEHMGWIRRIKHPLGDVLDVEAEHAVLLSYFRNNV
                     LHLVAAAAWIACCFLNNRRMSRSTVQRLGRIIYPFLQGELFLAWDEEGFGAQLQATMD
                     FFVRRGLLEATGDGRMLERGPGQDDASFQLRIIARSLIQAFERYYITVAALVKHGPHV
                     LSAGALETTCTLTAQRLALLNELSAPEFFDKALFRGFIQKLREQKIVWTDDGGKLDYD
                     RALEDMVRDARVILAREVRHSILKITPGGEDRHDADRDEEDAVRRAAPRDVAPADSTP
                     PDASP"
BASE COUNT          542 a         1210 c         1168 g          505 t
ORIGIN      
        1 cgcggctcga tcacgctgct gcgggccggt gacttcaagg gtttgtggaa gcacaacctg
       61 cccgcagcgg attacgcgac gctgcgcacc agctggggcc gtgaccacgc gggcgcaccg
      121 ccgttgagcg atgccgaccg cgcgcgcttc aacctggtgg tgcacgaact gaccgcgccg
      181 aacgcggaaa gcacgctgga tgccatggtg gagccgcagc tggcgcagct ctcgcagcgc
      241 taccacgacc agctgccgat catggtcaag ttgggcgggg cggtgctcaa gaacgggctg
      301 gaacagaacc cgcggctgga tgccgaccag aagacccagg ccgccagcct gatcgacgtg
      361 ctgacgccat gggctgcgca ggcgccgtgg ctcgaccagg ccacggcaaa gcgcgccgtg
      421 cgggtgctgg tggcaacggc acgcaagctc gatctcacca gcccggaaga cctgcgcgac
      481 gccggcttcg atgccagcat gggccgcctc aacgtcggct accgcggcgc caggcgcctg
      541 ctggcgttgt acggcctgcc gctggatgcc gcgctggatt cggcgcgggt cagcgtggcc
      601 agcaacgacg gcacccacgc cgtggtcaag gtcgactaca ccctgctcgg ccacccgctg
      661 acgacgacca ccacgctggt gcgcgaggac ggacgctggt acagcgcggc gatgctggct
      721 gccgcgcggc agccggccac gccggtcgcc gtcgccaccg cgccgttctg agcgcatgcc
      781 cggcacgggc agccaccaca cgcgtgagca tggtgggcgg cccaagccgg tagaataggc
      841 cgatgcgacc gatgtcccac gcggattcct cccatcgccg cgcgccctgg tggttcgggc
      901 ttgccggcca attgctgcaa ccgtgggtgc gcctgcgccg cgatccggcc gaacccgcca
      961 gcctgctcaa ggccgacgca ccggtgtgct acgtgatcga gcgcaacggc ttttccgacg
     1021 cgctgatcct cgaccgcgcc tgccgcgaag ccggcctgcc cagcccgatg cagccgctgg
     1081 ccggcacccg gcgccggcgt tcggtgttcg cgctgatgcg gcgcgatggc tggctgttcg
     1141 ggcgcaagcg ccaccgcaag ctcggcgtcg cggtggcgca gctcacacat gcgctcgaag
     1201 gcgccggcga gcgcgatatc cagatcgtgc cggtgtcgat cttcgtcggc cgcgcgccga
     1261 accgcgaatc gggctggttc agcgtgctgt tctccgaaaa ctgggtgatg gtcggccgct
     1321 tccgacggat gctcgcgctg ctgctcaacg ggcgcgacac cgtggtgcac ttctccgagc
     1381 cggtgtcgct gcgcgcggtg ctggccgaat cccgcgaatt gccgccgccg cgcctcgcgc
     1441 gcaagctggc gcgcgtgctg cgcacccact tccggcgcat ccgtgcggcg gtgatcgggc
     1501 cggacctgtc gcacaagcgc acgatggtgg acgacgtgct gcgcgccgag ccggtacgcg
     1561 ccgcgatcgc ggccacggcg gccaaggaga agaccagcga ggcgcgggtg tggcgccgcg
     1621 cgcgcaagat gatgctggag atcgcggccg actattcgca cccggtcgtg cgctcggtgt
     1681 cgtttctgct gcgcaatttc tggaacaagc tgtacgacgg catcgcgatg caccacttcg
     1741 acaaggcgcg cgcggcggcg cccggcttcg aggtggtcta cgtgcccagc caccgcagcc
     1801 acgccgatta cctgctgctc agctaccagc tgcacatgtc cggcgtggtg ccgccgcaca
     1861 tcgccgccgg catcaacctg aacctgccgc tgatcgggcc actgctgcgc cgcggcggcg
     1921 cgttcttcat gcgccgcacg ttcaagggca acgcgctgta ttcggtgctg ttcaacgagt
     1981 acatggccaa gctgatcgac cgtggcgtgc cgatggaata tttcatcgag ggcggccgct
     2041 cgcgcaccgg gcgcctgctc gcgccacgcg ccggcatgct ggtgatgacg atgcgcgcgt
     2101 tcctgcgcgc gccgcgccgg ccagtgctgt tccagccggt gtacatcggc tacgagcggc
     2161 tgatggaagg caagagctac gccggcgagc tgtccggcca ggcgaaggag aaggaatcgc
     2221 tgttcggcct gctcaagggc ctcaaggtgc tgcgcaagcg ctacggcatg gtcaccatca
     2281 atttcggcga gccgatcgag ctcacgccgc tgctcgacgc cgccagcccc gactggcgca
     2341 gcgccggcaa cgaacccgag gtgcgcccgg agtggatgag cgcggcgatc gacgacctcg
     2401 cgcaccgcat ccagatcaac atcaaccgcg cggccgacgt caacccgatc aacctgctgg
     2461 cgctcacgct gctggcgacg ccgaagcacg cgatggcgga aaccgacctg ctggcgcagc
     2521 tcgaggtgac caagtcgctg ctgcaggagc tgccctactc cgaccgcatc acgctgacgc
     2581 cgatgaaccc ggccggcatc atcgcccacg gcgagcacat gggctggatc cggcgcatca
     2641 agcatccgct cggcgacgtg ctcgacgtcg aggccgagca cgcggtactg ctgagttatt
     2701 tccgcaacaa cgtgctgcac ctggtcgccg cggcggcgtg gatcgcctgc tgcttcctca
     2761 acaaccggcg catgtcgcgc tccacggtgc agcggctggg ccgcatcatc tacccgttcc
     2821 tgcaggggga gttgttcctg gcatgggacg aggaaggctt tggcgcgcaa ctgcaggcga
     2881 cgatggattt cttcgtgcgc cgcggcctgc tcgaggccac tggcgatggc cgcatgctcg
     2941 aacgcgggcc gggccaggac gacgcgtcgt tccagctgcg catcatcgcg cgcagcctga
     3001 tccaggcctt cgagcgctac tacatcaccg tcgccgcgct ggtgaagcac ggcccgcatg
     3061 tgctgtccgc gggggcgctg gaaaccacct gtacgctcac cgcgcagcgc ctcgcgctgc
     3121 tcaacgagct ttccgcaccg gagttcttcg acaaggcgct gttccgcggc ttcatccaga
     3181 agctgcgcga gcagaagatc gtgtggaccg acgacggcgg caagctggac tacgaccgcg
     3241 cgctggaaga catggtgcgc gatgcacggg tgatcctggc gcgcgaagtg cgccactcca
     3301 tcctcaagat cacccccggc ggcgaagacc ggcacgacgc ggatcgcgac gaggaggacg
     3361 ccgtgcgccg cgccgcgcca cgcgacgtcg cacctgcgga cagcacgccc ccggacgcct
     3421 cgccg
//
LOCUS       DASSVL010000516         4658 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_576942, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000516 DASSVL010000000
VERSION     DASSVL010000516.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 4658)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4658)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4658
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_576942"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..864
                     /locus_tag="VFM52_09050"
     CDS             <1..864
                     /locus_tag="VFM52_09050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019659149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HET8765353.1"
                     /translation="ILGKLITLPALQLVWWRMLMVTAALLLMPKVWRGLRAMPGRLRL
                     AYAGIGVLVSLHWLTFYAAIKLANASVGATCIAIGPVFLAFVEPWLAKRRFDPRELMV
                     GVAVVPGVAMVVGGVPGSMRLGIAVGVLSALFVALFGSLNKRFVDRGDPLTVTCIELG
                     TGAVFLTLLAPILPHAGPAFVLPDMHDTVLLLALAFGCTLLPFALLLVALRHMSAFGT
                     QMVTNLEPVYAIILAMILLGEQRQLDHAFYVGVAVILLAVFAHPLLSRRLGPPRGAEL
                     MGTTESHNVVD"
     gene            908..2332
                     /locus_tag="VFM52_09055"
     CDS             908..2332
                     /locus_tag="VFM52_09055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015447964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase D-like domain-containing protein"
                     /protein_id="HET8765354.1"
                     /translation="MPTRSPLSSPATRHLAEQALSRSAGAPLLGGHAVELVIDAPAHY
                     QAWLEAIGHARRSVLLENYIIRDDEVGRAFRAALVERARAGVIVAVLVDWMGCLGESG
                     RKFWQPLRAAGGRVATFNPPRLGQTFGWLSRDHRKLVVVDGEIGFLSGVCISAKWLGH
                     PARQVPPWRDTGVTLRGPAVADMQAAFLQTWAETRTPLPVLEVPAGTPAGDVALRLIA
                     TQPASAGIYRLDQMIAALARKTLWLTDAYFVGTAPYVQALVAAARDGVDVRLLVPGTS
                     DLPLVANLSRSGYRPLLQAGVRVFEWNGSMLHAKTAVADGQWARVGSSNLNLASWLNN
                     REIDVAIEDAGFAASLAAQYETDLEGSTEIVLSPRRHRRDKVAGRTGRPRHPHHDGGS
                     SGRAATSALRLANRMGAVLADQRVLGPADAGLLGRGALVLVALAVTASIWPAAIAWPF
                     GLVCAWLALNLGIRAWRQRRRKPR"
     gene            2423..3778
                     /gene="xseA"
                     /locus_tag="VFM52_09060"
     CDS             2423..3778
                     /gene="xseA"
                     /locus_tag="VFM52_09060"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014403128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009318 - exodeoxyribonuclease VII
                     complex [Evidence IEA];
                     GO_function: GO:0008855 - exodeoxyribonuclease VII
                     activity [Evidence IEA];
                     GO_process: GO:0006308 - DNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII large subunit"
                     /protein_id="HET8765355.1"
                     /translation="MPAPDAPSPPPRQVLTPSSLNRLVRGLLEDALPLVWIEGELSNV
                     ARPASGHLYFTLKDSAAQVRCAMFRSSNAALRFKPADGLQVLLRARVGLYEARGEYQL
                     IAEHMELAGEGALQRAFEALKAKLDAEGLFDPARKRPLPRFARRIGVITSATGAAIRD
                     VLSVLGRRWPLVEVEVLPVPVQGREAPPAIVAMLRKASACGRYDVLLVTRGGGSLEDL
                     WAFNDEAVARAIHASTVPVVSAVGHEIDFSIADFVADVRAPTPSAAAEILVPDAQAVL
                     HRLHQWQARLATSARRRLQASSQRLDIASARLQAQRPETRLARNGERLIELHRRLLAA
                     WRDAQAARTARVERLTLQLRANVPQQRIALHRQRLAERWQQLRQAMTRRLDRDRQALQ
                     EAVRTLHAVSPLATLDRGYAILRDADGHVVTSIAAVQPGDTVQASLADGRFHARVVDV
                     E"
     gene            complement(3810..4463)
                     /locus_tag="VFM52_09065"
     CDS             complement(3810..4463)
                     /locus_tag="VFM52_09065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007080732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HET8765356.1"
                     /translation="MIQIAVVDDHELVRTGFRMILEQQGDLKVCGEASNAEDGLRLIH
                     ACKPQVAVVDVHMPGMSGIELTERVCRAELATRIVVVTVVDDGRFPRRVLEAGATGYL
                     TKGCSAEELVTAVRHAARGQRYLAPAVAQQLALASIDGSDSPFDVLTSRELEVAMMLV
                     RGKSLTRIGAQLNLSPKTVSTYKQRLMEKLHVEHVLGLAHLMTQHGLIDSPSHQVHL"
BASE COUNT          634 a         1726 c         1585 g          713 t
ORIGIN      
        1 atcctcggca agctgatcac cctgcccgcg ctgcagctgg tgtggtggcg catgctgatg
       61 gtcaccgcgg cactgctgct gatgccgaag gtctggcgcg ggctgcgcgc catgccggga
      121 cggctgcgcc tggcgtatgc gggcatcggc gtgctggtgt cgctgcactg gctgaccttc
      181 tacgcggcga tcaagctcgc caatgcctcg gtgggcgcga cctgcatcgc gatcgggcca
      241 gtgtttctcg ccttcgtcga accgtggctg gcgaagcggc ggttcgatcc gcgcgagctg
      301 atggtgggcg tggccgtggt gcctggcgtg gcgatggtgg tcggcggggt gccgggcagc
      361 atgcgcctgg gcatcgccgt cggcgtgctg tcggcgctgt tcgtcgccct gttcggctcg
      421 ctcaacaagc gcttcgtcga tcgtggcgac ccgctcaccg tgacctgcat cgagctcggc
      481 accggggccg tgttcctgac cctgctggca ccgatcctgc cgcacgccgg cccggccttc
      541 gtgctgcccg acatgcacga caccgtgctg ctgctggcgc tcgcgttcgg ttgcaccctg
      601 ctgccgttcg cgctgctgct ggtggcgttg cgccacatga gcgcgttcgg cacgcaaatg
      661 gtgaccaacc tcgagccggt gtacgcgatc atcctggcga tgatcctgct cggcgagcag
      721 cgccagctcg accacgcgtt ctacgtcggc gtcgccgtca tcctgctcgc ggtgttcgcc
      781 cacccgctgc tgagccggcg gctcggcccg ccgcgcggcg cggaattgat gggcaccacg
      841 gaaagccaca acgtggtcga ctgacgcgcg acgggttgcg accgcggccg cgtggcacac
      901 tccacgcatg cccacccgtt cgccgctgtc ctctcctgcc acgcgccacc tcgccgaaca
      961 ggcgctgagc cgcagcgcgg gtgcgccgct gctgggcggc cacgcggtgg agctggtgat
     1021 cgacgcgccg gcgcattacc aggcctggct cgaagccatc ggccacgcgc gccgcagcgt
     1081 gctgctggag aactacatca tccgcgacga cgaggtcggc cgcgcgtttc gcgccgcgct
     1141 ggtcgagcgc gcccgcgccg gggtgatcgt cgccgtgctg gtcgactgga tgggctgcct
     1201 cggcgaatcc ggccgcaagt tctggcagcc gttgcgcgct gccggcgggc gggtcgccac
     1261 cttcaacccg ccgcgtctcg gccagacctt cggctggctc agccgcgacc atcgcaagct
     1321 ggtcgtggtg gacggcgaga tcgggtttct gtccggcgtg tgcatcagcg cgaaatggct
     1381 gggccaccct gcccgccaag tgccgccctg gcgcgacacc ggcgtcaccc tgcgcgggcc
     1441 cgcggtggcc gacatgcagg ccgcgttcct gcaaacctgg gcggaaaccc gcacgcccct
     1501 gccggtgctc gaagtacccg ccggcacccc ggccggcgac gttgcgctgc gcctgatcgc
     1561 gacccagccg gccagcgccg gcatctaccg gctggaccag atgatcgcgg cgctggcgcg
     1621 caagacgctg tggctgaccg acgcctactt cgtcggcacc gcgccctacg tgcaggcact
     1681 ggtggcggcc gcgcgcgacg gggtcgacgt gcgcctgctg gtgcccggca ccagcgacct
     1741 tccgctggtg gccaacttgt cgcgctcggg ttaccggcca ctgctgcagg ccggggtgcg
     1801 ggtgttcgaa tggaacggct cgatgctgca cgccaagacc gccgtcgccg atggccagtg
     1861 ggcacgcgtg ggctcgtcca acctgaacct cgcgagctgg ctcaacaacc gcgaaatcga
     1921 cgtggccatc gaggatgccg ggttcgccgc gagcctggcg gcgcaatacg agacggacct
     1981 cgaaggttcc accgaaatcg tgctcagccc gcgccggcat cggcgcgaca aggtggccgg
     2041 ccgcaccggg cgcccccgcc acccgcacca cgacggcggc agctccggcc gcgcggcaac
     2101 cagcgccttg cgcctggcca accgcatggg cgcggtactg gccgaccaac gcgtgctcgg
     2161 tccggccgac gccggactcc tggggcgcgg cgcactggtc ctcgtcgcgc tggccgtgac
     2221 cgcatcgatc tggccggcag cgatcgcctg gccctttggc ctggtgtgtg cctggctggc
     2281 cctgaacctc ggcatccggg cctggcgcca gcggcgccgc aagccgcgct agggacatca
     2341 accgatacat gcacaacatg cgccaaatgc ttgttgtgaa agccgtcgca tcggtcatgt
     2401 cgcgtgctag tctgcccctc ccatgcccgc gcccgacgcc ccgtcacccc caccccgcca
     2461 ggtgctcacg ccgagcagcc tgaatcgcct ggtgcgcggg ctgctcgagg acgcgttgcc
     2521 gctggtgtgg atcgagggcg agctgtcgaa tgtcgcgcgc ccggcctccg ggcacctcta
     2581 tttcacgctc aaggacagcg ctgcccaggt gcgctgcgcg atgttccgct ccagcaacgc
     2641 cgcgctgcgc ttcaagccgg ccgacggcct gcaggtgctg ctgcgcgcgc gggtcggcct
     2701 gtacgaggcg cgcggcgagt accagctgat tgccgagcac atggaactgg ctggcgaagg
     2761 ggcactgcag cgcgccttcg aggcgctcaa ggcaaaactc gacgccgaag gcttgttcga
     2821 ccccgcgcgc aagcggccgc tgccgcgctt cgcccgccgc atcggcgtca tcacctcggc
     2881 caccggtgcg gcgatccgcg acgtgctgag cgtgctcggc cggcgctggc cgctggtcga
     2941 ggtggaggtc ctgccggtgc cggtgcaggg gcgcgaggcg ccgccggcga tcgtcgccat
     3001 gttgcgcaag gcctcggcct gcgggcgcta cgacgtgctg ctggtcaccc gcggcggcgg
     3061 ctcgctggaa gacctgtggg cgttcaacga cgaggcggtg gcccgcgcga tccacgccag
     3121 tacggtgccg gtggtcagcg cggtcggcca cgagatcgat ttctcgatcg ccgatttcgt
     3181 cgccgacgtg cgcgcgccga caccttccgc ggcggcggaa atcctcgtgc ccgatgcgca
     3241 ggccgtgctg catcgcctgc accagtggca ggcgcgcctg gcgacgagtg cgcgacgccg
     3301 gctgcaggca tcgagccaac gcctggatat cgcgtccgcg cgcctgcagg cacagcgccc
     3361 ggaaacccgg cttgcccgca atggcgagcg cctgatcgaa ctgcaccgcc gcctgctggc
     3421 cgcatggcgc gatgcccagg ctgcacgcac cgcgcgcgtc gagcgcctga cgctgcagct
     3481 gcgcgcaaat gtgccgcagc agcgcatcgc cctgcaccgg caacgccttg ccgaacgctg
     3541 gcagcagctg cgccaggcca tgacgcgacg cctcgaccgc gaccgccagg ccctgcagga
     3601 ggccgtgcgc acgctccacg ccgtcagccc gcttgccacg ctcgaccgcg gctacgccat
     3661 cctgcgcgac gccgacggcc acgtggtgac ctcgatcgcc gccgtgcaac cgggcgacac
     3721 ggtgcaggcc agcctcgccg acggacggtt ccacgcccgc gtcgtcgacg tcgaatgagc
     3781 ggcgcggcca cgcgggccgg gtcgccgcgt cagagatgca cctggtggct cggcgaatcg
     3841 atcaggccgt gctgcgtcat cagatgggcc aggccgagca cgtgctcgac gtgcagtttc
     3901 tccatcaggc gctgcttgta ggtcgacacc gtcttcggac tcaggttgag ctgcgcgccg
     3961 atgcgcgtca gcgacttgcc gcgcaccagc atcatcgcca cctcgagctc gcggctggtc
     4021 agcacgtcga acggcgaatc gctgccatcg atcgaggcca gggccagttg ctgggccact
     4081 gccggcgcca ggtagcgctg cccgcgtgca gcatggcgca ccgcggtcac cagttcctcg
     4141 gcgctgcagc ccttggtcag gtaccccgtg gcgcccgctt ccagcacccg ccgcgggaag
     4201 cggccgtcat cgaccacggt caccaccacg atgcgcgtgg caagctcggc acggcacacc
     4261 cgctcggtca gctcgatgcc actcatcccc ggcatgtgca cgtcgaccac ggcgacctgc
     4321 ggcttgcacg cgtggatcag ccgcaggcca tcctccgcgt tgctcgcctc gccgcagacc
     4381 ttcaggtcgc cctgctgctc aaggatcatc cggaagcccg tgcgcacgag ctcgtggtcg
     4441 tcgacgaccg caatctggat cacgcccgct ccccctgcct gctcaagccc gcatggtaat
     4501 gcgcgatcac ccgttgccga aacgtgcgcc cccgccccgc tcacacgcgt tgaacctcgc
     4561 cgacgctagg ctgcgtggca actgtcccgg acaccccgcc atgctcgaca agtcgtaccc
     4621 gtactacctc gccaaccgtg cgcaggccgc gaaggaaa
//
LOCUS       DASSVL010000517         2311 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_25824, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000517 DASSVL010000000
VERSION     DASSVL010000517.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2311)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2311)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2311
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_25824"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..654)
                     /locus_tag="VFM52_09070"
     CDS             complement(<1..654)
                     /locus_tag="VFM52_09070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008214674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HET8765357.1"
                     /translation="MSATITARQKGFNRAEIVDRNFIEFVEGWQGDARTPAADDAPIL
                     PGSALDARGFRELFESQLVSRHLDLMARVLRVQNKVFYTIGSCGHEGNAMVARLTRHT
                     DPAFLHYRSGAFMAERSRQVPGIDPVHDAALSFAASAEDPASGGRHKVWGSKPLWVLP
                     QTSTIASHLPKALGTAIAIDHARRVHHALPIPADSIAVCSFGDASSNHATAQTAFNAA
                     "
     gene            complement(782..1954)
                     /locus_tag="VFM52_09075"
     CDS             complement(782..1954)
                     /locus_tag="VFM52_09075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018973838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HET8765358.1"
                     /translation="MAAARLNPLDLYDVRALLTDEERVVQDTVHRFIDEKVLPIIGDC
                     FDQARFPAELVPEIASLGLLGATIPTEYGGAGLSGVAYGLICQELERGDSGLRSFASV
                     QSSLVMYPIFAFGSEEQKQHYLPKMAAGEIIGCFGLTEPHGGSDPANMKTHAKKDGGD
                     WVINGAKMWITNGNLAHVALVWAQTDDGIRGFLVPTDSKGFAAQEIHKKMSLRASVTS
                     ALFLDGVRVPDANRLPNVKGLRGPLSCLDQARYGISWGPIGAAQACLAEVLAYADERT
                     LFGRKLAANQAVQMKLADIARRITTAQLLSLQLGRYKDAGTMAATQVSLAKWNNVRMA
                     LDVARECRDILGAAGITTEHAAIRHALNLESVVTYEGTQTVHQLVVGRELTGINAF"
     gene            2074..>2311
                     /locus_tag="VFM52_09080"
     CDS             2074..>2311
                     /locus_tag="VFM52_09080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003476249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA/RhaT family transporter"
                     /protein_id="HET8765359.1"
                     /translation="MFKGVLLGFAAFAAFSVSDAFVKAVRGGVPPYESVFIGAVLGLL
                     ALPFIKGEGDRWRDVFVSRRRAIWWTRALTGAIGN"
BASE COUNT          332 a          769 c          822 g          388 t
ORIGIN      
        1 cgccgcgttg aacgcggtct gcgccgtcgc gtggttggag gacgcgtcgc cgaacgagca
       61 tacggcgatc gaatcggccg gaatcggtag cgcgtgatgc acgcgccgcg cgtggtcgat
      121 ggcgatcgcg gtgccaagcg ccttgggcag gtgcgaggcg atcgtcgagg tctgcggcag
      181 cacccacagg ggctttgaac cccacacctt gtggcgtccg ccggaggccg ggtcctcggc
      241 gctggcggca aacgacagcg ccgcgtcgtg caccgggtcg atgccgggca cctggcgcga
      301 gcgctcggcc atgaacgcgc cgctgcggta gtgcaggaac gcgggatcgg tgtgccgcgt
      361 gagccgcgcc accatcgcat tgccttcgtg gccgcaggaa ccgatggtgt agaacacctt
      421 gttttgcacg cgcagcacgc gcgccatcag atccaggtgg cgcgacacga gctgggattc
      481 gaacagctcg cggaacccgc gcgcatccag cgcgctgccc ggcaggatcg gcgcgtcatc
      541 cgccgccggc gtgcgcgcgt cgccctgcca gccctcgacg aattcgatga agttgcggtc
      601 gacgatctcg gcgcggttga agcccttctg gcgggcggtg atggtggcgg acatgaataa
      661 cctcgatgga aaccgcgtcg cggcgcgata ccgcgccggg cgcccgacat gaatccgcgc
      721 cgcgatgcgg agcggcggat gcaaatgccg cacgcggcac gctgcgtgcg gcgacgcccg
      781 ttcagaacgc gttgatgccg gtcagctcgc ggccgacgac cagctggtgc acggtctgcg
      841 tgccctcgta ggtcaccacc gattcgagat tcagcgcgtg gcggatcgcg gcgtgctcgg
      901 tggtgatgcc ggcggcgccg aggatgtcgc ggcactcgcg cgcgacgtcg agcgccatgc
      961 gcacgttgtt ccatttcgcc agcgacacct gggttgcggc catggtgccg gcatccttgt
     1021 agcggccgag ctgcagcgag agcagctgcg cggtggtgat gcggcgggcg atgtcggcca
     1081 gcttcatctg caccgcctgg ttcgccgcca gcttgcgccc gaacagggtg cgctcgtcgg
     1141 catacgcgag cacttccgcc aggcacgcct gcgcggcgcc gatcgggccc cagctgatgc
     1201 cgtagcgcgc ctggtcgagg caggacagcg gcccgcgcag gcctttcacg ttcggcaggc
     1261 ggttcgcgtc cggcacgcgc actccgtcga ggaacagcgc gctggtgacc gaggcgcgca
     1321 ggctcatctt cttgtggatt tcctgcgccg cgaagccctt gctgtcggtc ggcaccagga
     1381 agccgcggat gccgtcgtcg gtctgcgccc agaccagtgc gacgtgggcg agattgccgt
     1441 tggtgatcca catcttggcg ccgttgatga cccagtcgcc gccgtccttc ttcgcgtggg
     1501 tcttcatgtt ggccgggtcg gaaccgccgt gcggctcggt caggccgaag cagccgatga
     1561 tttcgccggc cgccatcttc ggcaggtaat gctgcttctg ctcctcgctg ccgaaggcga
     1621 agatcgggta catcaccagc gagctttgca ccgaggcgaa gctgcgcagg ccggagtcgc
     1681 cgcgctccag ctcctggcag atcaggccat atgccacgcc gctcaggccg gcgccgccgt
     1741 attcggtcgg gatcgtcgcg ccgagcaggc cgaggctggc gatctccgga accagctcgg
     1801 ccgggaaccg cgcctggtcg aagcagtcgc cgatgatcgg cagcaccttc tcgtcgatga
     1861 agcgatgcac ggtgtcctgc accacgcgct cctcgtcggt gagcagcgcg cgtacgtcgt
     1921 acaagtccag cgggttcaag cgggcagcgg ccatggacgg cacatccgga aggaaagtcc
     1981 atcgatttta tcgacgtgcc acgcacgggt cacgccgggg tgcagcaggc ggcgtgcgat
     2041 catgcgcggg ctttccctcg ctgcggacgt ggcatgttca agggtgtcct gcttggtttt
     2101 gcggctttcg cggcgttctc cgtcagcgac gccttcgtca aggcggtgcg cggcggcgtg
     2161 ccgccctacg agtcggtatt catcggcgcc gtgctcggcc tgctcgcgct gccgttcatc
     2221 aagggcgaag gcgaccgctg gcgcgacgtc ttcgtttcgc gccggcgcgc gatctggtgg
     2281 acccgcgcgc tgaccggcgc catcggcaac a
//
LOCUS       DASSVL010000518         4021 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1353873,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000518 DASSVL010000000
VERSION     DASSVL010000518.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 4021)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4021)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4021
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1353873"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..362
                     /locus_tag="VFM52_09085"
     CDS             <1..362
                     /locus_tag="VFM52_09085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007804595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HET8765360.1"
                     /translation="RGHAASVLDLLDNLIDNAIRYAGRGSTVTVSLSRGPRGDACLAV
                     EDNGPGVPPELLPRLRERFFRAPGATTEGSGLGLAIVQRIAERHRAEVVYQLAEEHGL
                     RVEVRFPAVHDDPPASA"
     gene            444..1913
                     /locus_tag="VFM52_09090"
     CDS             444..1913
                     /locus_tag="VFM52_09090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007513316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux transporter outer membrane subunit"
                     /protein_id="HET8765361.1"
                     /translation="MFSSPDDARAHRFPLRRGGCRRGQVWGGALLAAAVVLAGCAVKM
                     PDLKPPIPAQWQQARASQAPAPTDLHGWWHAFHDPALDALVDRALAHNLDVAQAVEHL
                     RAARALQRPAHVRYWPMVKASTDQVVDPDASASYLVAGFDASWEFGLFGRTTATRREA
                     QGQLDASAADLAAARVSLVAEVVRNWIELRTAQQQEHLLQDVADLRTRQLDLITTRAH
                     LQLAATTDVDTAQAASAQAAAALATPRQAATAAAQRLAVLLGQNHPDPAWLAAGPQPE
                     LGAWQIDGAPADLLRTRPEIAKAEANVLAAAGELGIARADRFPQLGLNASMLWATDLN
                     NNRKRTVSNGLVTVGPMINIPLFDWGMRAAAAHAKSHELRAAVLAYRQAVLTGVAEVE
                     TALNALAQEEQREQHQQVALRALQHADAATATRVRLHLDSPLTLADHQLAADQARLEL
                     LDTRASRGIAYVALYKALGGAPRPTPDHDADAAPHEAAR"
     gene            1913..3043
                     /locus_tag="VFM52_09095"
     CDS             1913..3043
                     /locus_tag="VFM52_09095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007513318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HET8765362.1"
                     /translation="MVALARKTLIYEWRRFLPAIIAVGFAGLLQLLQLALVLGIFGAT
                     SIYITGSDGDVWIGYPGTQSVGSGRSISADVEAHVLMDPAVTRVEPYLWVDGDWRGAG
                     ETGGVSVFVSGIDPAANGLLFAKVLAPALRARLAEPDAVIVDRADLDKLGVALGQTAT
                     INGHRVRVVGVSHGLRGLGGINVVTSLDTARRLDTDDADDGPTYLVAKLRDPAAAEAV
                     ALRMQGDPAFGPYTTWSSADFARRSVRYWLFDTGAGAGVLFLAGIVFLVGAVITSQTL
                     VGAVNGSAREYATLNALGVGVGALRKVVLEQAFWVGALGLIGAVVLGALLLAVARSQD
                     VPVVLGPISAAACIALVLGQAAVSGMAAMRSLRRIDPATLLR"
     gene            3067..3771
                     /locus_tag="VFM52_09100"
     CDS             3067..3771
                     /locus_tag="VFM52_09100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008209139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HET8765363.1"
                     /translation="MIRATEVCKAFDSGRLRTQVLDRLSLTIDAGELTLISGPSGCGK
                     STLLAILSGLQKVDAGHVSALDSELGQLDLGELERFRLLHTGFVFQGFNLFPALTATE
                     QVELPLTHLGLTDREARKRAVQSLEEVGLGHRMRMRPAELSGGEKQRVAIARALAKQP
                     QLLFADEPTSALDAANGQTIIDLLHRIAHSHGTAVLCVSHDPRLVAHADRVLTMEDGR
                     ILSDRRRDVATESFPT"
     gene            3787..>4021
                     /locus_tag="VFM52_09105"
     CDS             3787..>4021
                     /locus_tag="VFM52_09105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019465765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin secretion protein D"
                     /protein_id="HET8765364.1"
                     /translation="MTPFLPCLLLALAAGGALVACSHSAPPAAAAGDATPYAAVARGR
                     IAIEGGLLALAMPREGTLASVDVHEGDTVKRGQV"
BASE COUNT          570 a         1492 c         1356 g          603 t
ORIGIN      
        1 tccgcggcca tgctgccagc gtgctcgacc tcctggacaa cctgatcgac aacgccatcc
       61 gctacgccgg gcgcggcagc accgtcaccg tgagcctgtc gcgcgggcca cgtggcgacg
      121 cctgcctcgc cgtcgaggac aacggtcccg gggtgccccc cgaactgctg ccgcgcctgc
      181 gcgaacgatt cttccgcgcg ccgggcgcga ccaccgaagg cagcggcctc ggcctcgcga
      241 tcgtgcagcg gatcgccgaa cgccatcgtg ccgaagtcgt gtaccaactg gccgaggagc
      301 atggcctgcg ggtcgaggtg cggtttccgg cggtacacga tgatccgccc gccagcgcct
      361 gacagcgcag gtacgcgcct gtatgctagg cggtcggcac gatcgccgcg ctcctattcc
      421 ctttcgctca cgtcgtgacc gcattgtttt cctcccccga cgacgcacgc gcccaccgct
      481 tcccactgcg ccgcggcggc tgccggcgtg gccaggtgtg gggcggcgca ctgctggccg
      541 cggccgtggt gcttgccggc tgcgcggtca agatgccgga cctgaagccg ccgatcccgg
      601 cgcaatggca gcaggcgcgc gccagtcagg cgccggcacc gaccgacctg cacggctggt
      661 ggcatgcctt ccacgatccg gcactcgacg cgctggtcga ccgcgccctc gcacacaacc
      721 tcgacgtggc gcaggcggtc gaacacctgc gtgccgcacg ggcgctgcag cgcccggcgc
      781 acgtgcgcta ctggccgatg gtcaaggcca gcaccgacca ggtggtcgat ccggatgcct
      841 cggcgtccta cctcgtcgcc ggcttcgatg cgagctggga attcggcctg ttcggccgca
      901 ccacggccac ccggcgcgag gcacaggggc aactcgacgc gagtgctgcg gatctcgccg
      961 cggcgcgggt ctcgctggtg gcggaggtcg tgcgcaactg gatcgagctg cgcaccgccc
     1021 agcagcagga gcatctgctg caggacgttg ccgacctgcg cacccgccag ctcgacctga
     1081 tcaccacccg cgcgcacctg caactggccg cgacgaccga cgtggacacg gcgcaggccg
     1141 ccagtgccca ggccgccgcc gctctggcaa ccccgcgcca ggcagccacg gccgcggcgc
     1201 agcggctggc ggtgctgctc ggccagaatc atcccgatcc ggcgtggctc gccgccgggc
     1261 cgcaacccga actcggcgcc tggcagatcg acggtgcgcc ggccgatctc ctgcgcacgc
     1321 ggccggaaat cgccaaggcc gaggccaacg tgctggcggc tgccggcgaa ctcggcatcg
     1381 cccgcgccga ccgcttcccg caactgggac tcaacgcctc gatgctgtgg gcgaccgacc
     1441 tcaacaacaa ccgcaagcgc accgtgtcca acggcctcgt caccgtcgga ccgatgatca
     1501 acatcccgct gttcgactgg ggcatgcgcg ccgccgcagc ccacgcgaaa tcccacgagc
     1561 tgcgggcggc ggtgctggcc tatcgccagg cggttttgac cggtgtggcc gaggtggaaa
     1621 ccgcgctgaa cgccctggcc caggaagaac agcgcgagca gcaccagcag gtggcgctgc
     1681 gcgccttgca gcacgccgat gcggccactg ccacgcgcgt ccgcctgcat ctggattcgc
     1741 cgctgaccct cgccgatcac cagctggccg ccgaccaggc acggcttgag ttgctggaca
     1801 cccgcgccag ccgcggcatc gcctacgtcg ccctgtacaa ggcgctgggc ggcgcgccgc
     1861 ggccgacacc ggaccacgat gccgacgccg caccacacga ggctgcacgc tgatggtggc
     1921 gctggcacgc aagacgctga tctacgaatg gcggcggttc ctgccggcaa tcatcgcggt
     1981 cggcttcgcc ggcctgctgc aactgctgca gctggcgctg gtgctgggca tcttcggcgc
     2041 caccagcatc tacatcaccg gctccgacgg cgacgtgtgg atcggctacc ccggcacgca
     2101 aagcgtcggc tccggccgtt cgatcagtgc cgacgtcgag gcccatgtgc tgatggatcc
     2161 cgcggtgacg cgcgtcgagc cctatctgtg ggtggatggc gactggcgcg gggccggcga
     2221 aaccggcggt gtgtcggtgt tcgtctccgg catcgatccc gccgcgaacg ggctgctgtt
     2281 cgccaaggtg ctggcgccgg cgttgcgcgc acgcctcgcc gagccggatg cggtgatcgt
     2341 tgaccgcgcc gacctcgaca agcttggcgt ggcgctgggc cagaccgcca ccatcaacgg
     2401 ccaccgggtg cgcgtcgtcg gcgtcagcca tggcctgcgc gggctcggcg gcatcaacgt
     2461 cgtcacctcg ctcgacaccg cgcgccggct cgacaccgac gatgccgacg acggcccgac
     2521 ctacctcgtc gccaagctgc gcgacccggc cgcggccgag gccgtcgcgt tgcgtatgca
     2581 gggcgatccg gcgttcggcc cgtacaccac ctggagctcg gcggacttcg cccgccgatc
     2641 ggtgcgctac tggctgttcg acaccggtgc cggcgcgggc gtgctgttcc tcgccggcat
     2701 cgtgttcctc gtcggcgcgg tcatcaccag ccagacactg gttggcgcgg tgaatggctc
     2761 ggcacgcgaa tatgccacgc tcaatgcgct cggcgtcggt gtcggcgccc tgcgcaaggt
     2821 ggtgctggaa caggcgttct gggtcggcgc cctgggcctc atcggcgcgg tggtgctggg
     2881 tgcgctgctg ctggctgtcg cgcgcagcca ggatgtgccg gtggtcctcg gcccgatttc
     2941 cgccgccgca tgcattgcgc tggtgctggg ccaggcggcg gtttccggca tggcggcgat
     3001 gcgcagcctg cgccgcatcg acccggcgac cctgctgcga tgaacgcgca cgtcgccaac
     3061 cggaccgtga tccgcgccac ggaggtgtgc aaggcgttcg acagcggccg cctgcgcacc
     3121 caggtgctcg accgcctgtc gctgaccatc gacgccggcg agctcacgct gatctccggg
     3181 ccgtccggct gcggcaagag tacgttgctg gcgatcctca gcggcttgca aaaagtcgat
     3241 gccggccacg tcagcgccct cgacagcgag ctgggtcagc tcgacctcgg cgagctggaa
     3301 cgcttccgcc tgctgcatac cggcttcgtg ttccagggct tcaacctgtt ccctgccctg
     3361 accgccaccg agcaggtcga actgccgctg acccatctcg ggctgaccga ccgcgaggcg
     3421 cgcaagcgcg ccgtgcaatc actcgaggaa gtcggcctcg ggcatcgcat gcgcatgcgt
     3481 ccggcggaac tctccggcgg cgagaaacag cgcgtggcga ttgcccgtgc cttggccaag
     3541 cagccgcagc tgctgtttgc cgacgagccg accagcgcgc tggacgccgc caacggccag
     3601 accatcatcg acctcttgca tcgcatcgcg catagtcacg gcactgccgt actgtgcgtc
     3661 agccatgatc cacgccttgt cgcccatgcc gaccgcgtgc tgacgatgga agacggccgc
     3721 atcctcagcg accgccggcg cgatgtcgct acggagtcct ttccaacatg atgcgcatat
     3781 cgtctcgtga cgccttttct cccctgcctg ctgctggcgc tcgccgctgg cggcgcgctg
     3841 gttgcctgct cgcactcggc accgcctgcc gccgcggcag gcgatgccac gccctacgcc
     3901 gccgtcgccc gcggccggat cgcgatcgaa ggcggcctgc tcgcgctggc gatgccgcgc
     3961 gaaggcacgc ttgccagcgt cgacgtgcac gaaggcgaca cggtgaagcg tggccaggta
     4021 c
//
LOCUS       DASSVL010000519         4556 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_477920, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000519 DASSVL010000000
VERSION     DASSVL010000519.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 4556)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4556)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4556
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_477920"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..629)
                     /locus_tag="VFM52_09110"
     CDS             complement(<1..629)
                     /locus_tag="VFM52_09110"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007081102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HET8765365.1"
                     /translation="MSGSAPPTPRLTVVQLIPALRSGGAERSALEIARALVQAGHRSV
                     VISAGGRLVERLLAEGSEHITLDIGRKSLATLWRLPALRRTLRALRPDIVHARSRLPA
                     WLGWWALKGLRPRPHFVTTVHGLNSPGRYSSILLRGERVIVVSQTLRDYVLGHYPQLE
                     PNRVRVIPRGIDPHAFPYGYRPDETWRQAFLAEYPRLAGAPLLTLPARGT"
     gene            complement(723..929)
                     /locus_tag="VFM52_09115"
     CDS             complement(723..929)
                     /locus_tag="VFM52_09115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010892647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-finger domain-containing protein"
                     /protein_id="HET8765366.1"
                     /translation="MHEPLTHVGSGHTCAQKRYEVTRADLPLSCPMPGMSLWNAHPKV
                     YLPIVDDGGETVCPYCASRYVLID"
     gene            complement(1052..1636)
                     /locus_tag="VFM52_09120"
     CDS             complement(1052..1636)
                     /locus_tag="VFM52_09120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007081104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YceI family protein"
                     /protein_id="HET8765367.1"
                     /translation="MRVFSSLLLAGLLGADTVAQATPVTYQLDPNHTMVLFSWSHFGY
                     SHPTADIGLASGTVTFDEQHPAAASVEVTLPLSKLDTHVPALDEHLKQADFFDAAKYP
                     TVTFKSTKVEPVDAKHFKVTGNLTIHGVTRPVTLDATLNRVGPHPMNQQPAIGFDATA
                     TLRRSEFGVGLMAPMVGDEIQVRITTEGSVPKAK"
     gene            1793..2773
                     /locus_tag="VFM52_09125"
     CDS             1793..2773
                     /locus_tag="VFM52_09125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010343088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mitochondrial fission ELM1 family protein"
                     /protein_id="HET8765368.1"
                     /translation="MRSAVRDECWVITDFAAGNQRQALALADRMGLPVRHLQLEPRAP
                     WSWLAPRFALGGAWTLPRTQRPLFSPPWPRLAIGCGRAAALYTRMLGRLARGQCHTVQ
                     ILDPRIHPAHWDTVIAPRHDQLTGPNVLTPLGSLNPVDDAWLADGREANPGLAELPQP
                     RVGVLLGGPRTGLAMDAAYAQTLATRLVARCRREGGSLFVLRSRRTPDEMVAIFRHLL
                     AGLPGMVWSGPDDGRNPYPGVLGWADRLVATPDSVNMLSEACAVGCAVHTLETPTLPA
                     KLQRFHQALREQGLLHDLDDDAPARQPPLRETAGIARQVRERMGAATPPR"
     gene            complement(2792..3025)
                     /locus_tag="VFM52_09130"
     CDS             complement(2792..3025)
                     /locus_tag="VFM52_09130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007082629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin family protein"
                     /protein_id="HET8765369.1"
                     /translation="MSDLVLYQRDYCHLCDLALAVMAEARTPEFDSQWIDDAPELETR
                     YGTRVPVLRDNRSGRELDWPFDAAAVRVFLDAG"
     gene            3097..4479
                     /locus_tag="VFM52_09135"
     CDS             3097..4479
                     /locus_tag="VFM52_09135"
                     /EC_number="4.3.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014161485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003941 - L-serine ammonia-lyase activity
                     [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0009063 - amino acid catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-serine ammonia-lyase"
                     /protein_id="HET8765370.1"
                     /translation="MAVSVFDLFKIGIGPSSSHTVGPMRAAARFAERWLDEKGVLDHV
                     ARVRAELYGSLAMTGRGHGTDKAVLLGFTGEHPDTVDPDRIPATLARIRESGRIDLLG
                     KREIEFDEKRDLVFNKRQKLPFHTNGMRFSAYDADGNQLATRDYYSVGGGFVVNHDEA
                     AEDRIVADTTEQPYPFSTGDELLAQCEQHGITIAQLMLANEGVWRTPAETRAGLMTIW
                     QAMADCVARGLRSPGTLPGGLHVTRRAPAMAEELRSQPEAALKDPLTILDWVNLYALA
                     TNEENAAGGRVVTAPTNGAAGIIPAVGHYYLRFCPKADEGGIVDYLLTAAAIGILYKE
                     NASLSGAEVGCQGEVGVACSMAAGGLAAALGGSIWQVENAAEIGMEHNLGLTCDPIGG
                     LVQIPCIERNAMGSVKAINASRMALKSDGKHRVSLDKVIKTMRDTGRDMKDKYKETSR
                     GGLAVNVIEC"
BASE COUNT          766 a         1577 c         1560 g          653 t
ORIGIN      
        1 gtaccgcgcg ccggcagggt caacagcggc gcaccggcca gccgtgggta ctcggcgaga
       61 aacgcctgcc gccaggtttc gtccgggcga tagccgtagg gaaacgcatg cggatcgatg
      121 ccgcgcggga tcacccgcac gcgattgggt tccagctgcg ggtaatgccc gagcacgtag
      181 tcgcgcaagg tctgcgatac cacgatcacg cgctcgccac gcaggaggat cgagctgtag
      241 cgcccaggcg agttgagccc gtgcacggtg gtgacgaaat gcggtcgcgg gcgcaacccc
      301 ttgagtgccc accaacccag ccacgccggc agccgcgaac gcgcatgcac gatgtccggc
      361 cgcagcgcgc gcagcgtgcg gcgcaacgcc ggcagccgcc acaacgtggc cagcgacttg
      421 cgcccgatgt cgagcgtgat gtgctcgctg ccttcggcca gcaggcgctc gacgaggcgt
      481 ccgccagcgg agatcaccac cgagcgatgg ccggcctgga ccagcgcacg cgcgatctcc
      541 agggccgaac gctccgcgcc gccggaacgc agcgcaggga tcagttggac cacggtcagc
      601 cgtggcgtcg gcggggcgct accggacatg gttcctgtct gcgggcctgc atcctgctgc
      661 atgagtttca tggagaaacc gatgcaagaa caatgccgtt tgcccccgaa tggcggtgcc
      721 gatcagtcga tcagtacgta acgcgaggcg caataaggac aaaccgtctc accgccgtcg
      781 tcgacgatcg gcagatagac cttcgggtgg gcgttccaca gcgacatgcc gggcatcgga
      841 cacgacagcg gcaggtcggc gcgcgtcact tcgtaacgtt tttgggcgca cgtgtgaccg
      901 ctgccgacgt gggtcagcgg ctcatggatc tttttgacca gttgctgggc agcagcccag
      961 ggagcgggga cggacatggg gattccgatc tggacaagga cacccgccat ggtagcaggc
     1021 cgctgccgtc acgctgcgcg gacgccctgg atcacttcgc cttgggtacc gagccttcgg
     1081 tggtgatgcg cacctggatc tcgtcgccca ccatcggcgc catcaggccg acgccgaact
     1141 ccgagcgcct gagcgtcgcg gtggcgtcga agccgatcgc cggctgctgg ttcatcgggt
     1201 gcggaccgac gcggttcaac gtggcgtcca gcgtgaccgg cctggtcacg ccgtggatgg
     1261 tgaggttgcc ggtgaccttg aagtgtttcg cgtccaccgg ctccaccttg gtgctcttga
     1321 aggtgaccgt cgggtacttc gcggcgtcga agaaatcggc ctgcttcagg tgctcgtcga
     1381 gggccggcac atgggtgtcg agcttggaca gcggcagcgt gacctcgacc gaggccgcgg
     1441 cgggatgctg ttcgtcgaag gtgaccgtgc cgctcgccag gccgatgtcg gcggtgggat
     1501 gggaatagcc gaagtggctc cagctgaaca gcaccatcgt gtggttcggg tcgagttgat
     1561 aggtgaccgg ggtggcctgg gcaacggtgt ccgcaccaag caagccggca agcaacaggc
     1621 tggaaaacac gcgcatggaa aatctccaca gacatgggga cggtcgccgg tatcctgcaa
     1681 cgacatggtg accacaaacg agccggcagt ctaacggcac ccggactttg cggtgatgca
     1741 gacaggggca acgcagcatg cacatgacga caccaatccg gcggcacccg gcatgaggag
     1801 cgcggtgcgc gacgagtgct gggtcatcac cgacttcgcc gccggcaacc agcgccaggc
     1861 gctggcgctg gctgaccgca tgggcctgcc ggtgcgccac ctgcagttgg aaccgcgcgc
     1921 gccgtggtcg tggctggccc cgcgcttcgc gctcggcggc gcgtggaccc tgccgcgaac
     1981 ccagcgccct ctgttctcgc cgccgtggcc gcgactggcg atcggctgcg gccgcgccgc
     2041 ggccctgtac acgcgcatgc tggggcgcct cgcacggggg caatgccaca ccgtgcaaat
     2101 cctcgacccg cgcatccacc cggcgcactg ggacactgtc attgcgccac gccacgatca
     2161 gctgaccggc cccaacgtgc tgaccccgct cggctcgctc aacccggtcg acgacgcatg
     2221 gctggccgat ggccgcgagg ccaaccccgg cctggccgag ctgccgcagc cgcgggtcgg
     2281 cgtgctgctc ggcggcccgc gcaccgggct cgcgatggac gcggcctacg cgcagaccct
     2341 ggccacccgg ctcgtcgccc gctgccggcg cgagggcggc agcctgttcg tgctgcgctc
     2401 gcggcgcacg ccggacgaga tggtggcgat cttccggcac ctgcttgccg gccttcccgg
     2461 catggtgtgg tcgggcccgg atgacggtcg caacccctac cccggcgtgc ttggctgggc
     2521 cgatcggctg gtggccacgc cggattcggt gaacatgctg agcgaggcct gcgccgtcgg
     2581 ctgcgcggtg cacacgctgg agacgcccac cctgccggcg aagctgcagc gcttccacca
     2641 ggcactgcgc gagcaaggcc tactgcatga tctcgacgac gacgcgccgg cgcgccagcc
     2701 gccgctgcgc gaaaccgccg gcatcgcgcg gcaggtgcgc gagcggatgg gagctgccac
     2761 gccgccgcgc tgatgccgcg cggccggttc gtcacccggc atcgagaaac acgcgcaccg
     2821 ccgccgcgtc gaacggccaa tccagctcgc ggccgctgcg gttgtcgcgc agcaccggta
     2881 cgcgggtgcc gtagcgcgtt tccagttccg gcgcgtcgtc gatccactgg ctgtcgaatt
     2941 ccggcgtgcg cgcctcggcc atgaccgcca gggccaggtc gcacagatgg cagtaatcgc
     3001 gctgatacag gacgagatcg gacatgtgtt gcggcgcacc gaggcaaatc gagggtggcc
     3061 cgtagaataa cggcccctct ccacgcagcc cacgtcatgg cagtcagcgt cttcgatctg
     3121 ttcaagatcg gcatcggtcc ctcttcctcg cacaccgtcg gcccgatgcg cgccgcagcg
     3181 cgcttcgccg agcgctggct cgacgagaaa ggcgtgctcg accacgtggc gcgcgtgcgc
     3241 gccgagctgt acggctcgct ggcaatgacc ggccgcggcc acggcaccga caaggcggtg
     3301 ctgctcggtt tcaccggcga gcatccggac acggtcgacc cggatcgcat cccggccacg
     3361 ctggcgcgca tccgcgagtc cggccgcatc gacctgctcg gcaagcgcga gatcgagttc
     3421 gacgagaagc gcgacctcgt gttcaacaag cgccagaaac tgccattcca caccaacggc
     3481 atgcgcttct ccgcctacga cgcggacggc aaccagctcg ccacgcgcga ctactactcg
     3541 gtcggcggcg gcttcgtggt caaccatgac gaggcggcgg aggatcgcat cgtcgccgac
     3601 accaccgaac agccgtaccc gttttcgacc ggcgacgagc tgctcgcaca gtgcgagcag
     3661 cacggcatca ccatcgcgca gctgatgctg gcgaacgaag gcgtatggcg caccccggcg
     3721 gaaacccgcg ccgggctgat gacgatctgg caggcgatgg ccgattgcgt cgcccgcggc
     3781 ctgcgctcgc ccggcacctt gcccggtggc ctgcacgtca cgcgccgcgc gccagccatg
     3841 gcggaggaac tgcgcagcca gcccgaggcg gcgctcaagg acccgctcac catcctcgac
     3901 tgggtgaacc tctacgcgct cgccaccaac gaggagaacg ccgccggcgg ccgcgtggtc
     3961 actgccccga ccaacggtgc ggccggcatc atcccggcgg tcggccacta ctacctgcgg
     4021 ttctgcccga aggcggacga gggcggcatc gtcgattacc tgctgaccgc cgcggcgatc
     4081 ggcatcctgt acaaggaaaa cgcctcgctg tccggcgccg aggtcggctg ccagggcgaa
     4141 gtgggcgtgg cctgctcgat ggctgccggc ggcctcgccg ccgcgcttgg cggcagcatc
     4201 tggcaggtgg aaaacgccgc cgagatcggc atggagcaca acctcggcct cacctgcgac
     4261 ccgatcggcg ggctggtgca gatcccgtgc atcgagcgca acgcgatggg ctcggtgaag
     4321 gcgatcaacg ccagccgcat ggcgctgaaa agcgacggca agcaccgcgt gtcgctggac
     4381 aaagtcatca agaccatgcg cgacaccggc cgcgacatga aggacaaata caaggaaacc
     4441 tcgcgcggcg ggctggcggt gaacgtgatc gagtgctgag agatcagcac tcggggaaag
     4501 cccccctcac cccaaccctc tcccccaagc ggagcttggg ggagagggag acaagc
//
LOCUS       DASSVL010000520         5409 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_619304, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000520 DASSVL010000000
VERSION     DASSVL010000520.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 5409)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5409)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5409
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_619304"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2578)
                     /locus_tag="VFM52_09140"
     CDS             complement(<1..2578)
                     /locus_tag="VFM52_09140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007809676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 2"
                     /protein_id="HET8765371.1"
                     /translation="MSCTVKHVLGLLAALAFAPLACAQTPYAATAVDGGAGTRTAIAH
                     WQIQSTAKAQQDGAAVSAAGYATTGWYPVSGRATVMAGLLENGLYPDLFHSDNLRAVQ
                     SPDASGKGFVVPWWYRSTFTLGAQPGLRTLLRTNGIIASADVWVNGHQVASHDELAGA
                     YPVHELDVTRWVHAGTNTLALRVHPADPRNSLSIGWVDWNPTPPDNNMGPYRGVDVVR
                     TGAVELRFAQVTPKLALPGLDHADLTVSVEARNLDSVAHQATISGTVAGVALKRTLTL
                     APGQTQTVTFTPQTDAGLALDHPRVWWPYAMGAQPLYQLALSAEVAGATSDTVHANFG
                     IRSVTAHLTADGYQQFVINGQPLLIRGGGWAPDMFLRDDPARMEAEFAYVRDLGLNTI
                     RGEGKLEDTRFYDLADREGVLILPGWECCDKWEAAAKTGAAPWDAATEKVAAASMASE
                     AHLLHNHPSVIGFLIGSDHAPPPALAKMYVDTLHAAGWATPIVAAAAAEGTAETGPSG
                     MKMDGPYAWIPPSYWYADKLGGAFGFDSEVGAGATIPTLEDVTRMLSPQEQEALWKYP
                     QLRQYHATASWSPFARLTPFDTALARRYGAPKSLADYVDKAQLDNYASTRAQFEAFNA
                     HMNAAKPATGVIYWMLNNAWPALHWHLYDYYMNPVGAYFGAKKANEPLHIQYAYDTRG
                     IVLVNHTLAAQSGLTARVRVRNLDGSVRFEKSLPGLDLAANHAQQVAVLPTIGHLSPT
                     YFVELELSSADGKPVSRNVYWLPTKPDVLDWAKSNWYLTPLTQYADLTALQSLPAVKP
                     TLHATLRHDGNDALVDVTLTIPTSAKTVALLQHLAIRQSAGGALALPVTWSDNDVTLW
                     PGE"
     gene            complement(2583..3962)
                     /locus_tag="VFM52_09145"
     CDS             complement(2583..3962)
                     /locus_tag="VFM52_09145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007809678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="APC family permease"
                     /protein_id="HET8765372.1"
                     /translation="MPDSNTSPAAGFHRSIGLFSGTAINMTQMCGIGPFITIPIMVAT
                     MGGPQAVIGWIAGAILAMADGLVWAELGAAMPGSGGTYVYLREAFQYRTGKLMPFLFI
                     WTVLLTIPLLMSTGIIGMVEYLGFFFPHLGWWPIHLVSLAATALVTWLLYRRIESIRL
                     ITIALWVIMLVSVIGVTAAGFADFHPEFAFDYPAGAFGSQFFVGLGAGLIIGIYDYLG
                     YFTTAYMGDELRNPGRTMPGSIIISVIAMMVVYLALNISVLGVAPWQEIAQSKSVASL
                     VVEHSWGHLAAAGMTVLIIVTAFASVFAGLLGGSRVPYQAAHEKVFLSVFGKLHAKHG
                     FPHVTLLTMGVVTAIGTFFDLAEVINMLLAATILVQSIAQIAALVVLRRRQPGLKRPY
                     RQWLYPLPCVIALAGWVYVYMSASTLSLILSGAWIVAGLVVFALWARHNRSWPFAPVE
                     IREAYLQED"
     gene            complement(4065..>5409)
                     /locus_tag="VFM52_09150"
     CDS             complement(4065..>5409)
                     /locus_tag="VFM52_09150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008214246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HET8765373.1"
                     /translation="LVRYVGADVTLDSGSCTAGNDQGYFRAGPISALQMGATPPPLSS
                     NWRQYTNLLGSGITFWAVNPHALDNPEAFWRSLYPQTQRQAAPGLTWGVWMKESTAYL
                     QADFSGTLGNMPYSGNVGMRVIHTNLDVTQHLSGAPGAYGTEPADAGTDLTRRRYKDY
                     LPAANFALDLTDSLKLRLAYSKNMMPLNLSTWGGGLQLAYSLVETPQGPLFRVAQGNS
                     AGNPNLNPWRSTNYGASLEWYINPTSMVSLALFRISVDSFIKNGSVINCTLPDEDGVV
                     RDRCITITEPVQGSGNSIHGAEFDYRQGFTFLPGILSKTGIEVNGTYAPSNSGEKDLA
                     GHEIPFQDNSTRSGNLILWYQDDRLQARVAYNYRSRRAVSDSVGGITGMEMYEAPQKY
                     LDASVSYKINKYAQVFLDGTNLTNEYQHYYLVWPDQPAHSTFSERMFMVGVRGQW"
BASE COUNT          818 a         1775 c         1949 g          867 t
ORIGIN      
        1 attcgccggg ccacagggtg acgtcattgt cactccacgt gaccggcagc gcgagcgcgc
       61 cgccggcgga ttggcggatc gcgaggtgct gcagcagcgc gaccgttttg gcgctcgtcg
      121 gtatcgtcag cgtgacatcg accagcgcgt cgttgccgtc gtggcgcagc gtcgcgtgca
      181 gcgtcggctt caccgccggc agcgactgca gcgcggtgag gtcggcgtac tgggtcagcg
      241 gggtcaggta ccagttggat tttgcccagt cgagcacgtc cggcttggtc ggcagccagt
      301 acacgttgcg gctcaccggc ttgccgtccg cgctgctcag ttccagctcg acgaagtagg
      361 tgggcgacag gtgtccaatc gttggcagca cggcgacctg ctgcgcgtgg ttcgcggcca
      421 ggtccaggcc gggcaggctt ttctcgaagc gcacgctgcc gtcgaggttg cgcacgcgga
      481 cgcgcgcggt gaggccggat tgcgcagcga gcgtgtggtt caccagcacg atgccgcggg
      541 tgtcgtacgc gtactggatg tgcagcggct cgttggcctt cttcgcgccg aaatacgcgc
      601 cgaccgggtt catatagtag tcgtacaggt gccagtgcag cgccggccag gcgttgttga
      661 gcatccagta gatcacgccg gtcgccggct tcgcggcgtt catgtgcgcg ttgaatgcct
      721 cgaactgcgc gcgcgtgctg gcgtagttgt cgagctgtgc cttgtcgacg tagtcggcga
      781 ggctcttcgg cgcgccgtag cgccgcgcca gcgcggtgtc gaacggcgtg agccgggcga
      841 acggcgacca cgacgcggtg gcgtggtact ggcgcagctg cgggtatttc cacagcgctt
      901 cctgctcctg cggcgagagc atgcgcgtca cgtcctccag ggtcgggatg gtggcgccgg
      961 cgccgacttc ggagtcgaag ccgaatgcgc cgccgagctt gtccgcgtac cagtagctcg
     1021 gcggaatcca cgcatacggg ccgtccatct tcatgcccga cggcccggtc tcggcggtgc
     1081 cttcggcggc ggccgcggcg acgatcggtg tcgcccagcc ggcggcgtgc agggtgtcga
     1141 cgtacatctt cgccagcgcc ggcggcggcg catggtcgct gccgatcagg aagccgatca
     1201 ccgacgggtg gttgtgcagc aggtgcgcct cgctcgccat cgacgcggcg gcgaccttct
     1261 cggtggccgc gtcccacggc gccgcgccgg tcttcgccgc cgcctcccac ttgtcgcagc
     1321 attcccagcc gggaaggatc agcacgccct cgcggtcggc gaggtcgtag aaacgcgtgt
     1381 cctccagctt gccctcgccg cggatggtgt tgagcccgag gtcgcgcacg taggcgaact
     1441 cggcttccat ccgcgccggg tcgtcgcgca ggaacatgtc cggcgcccag ccgccgccgc
     1501 ggatcagcag cggctggccg ttgatgacga actgctggta gccgtccgcg gtgaggtgcg
     1561 cggtgacgct gcggatgccg aagttcgcgt gcaccgtgtc cgacgtcgcg ccagcgacct
     1621 cggcgctgag cgccagctgg tacagcggct gcgcgcccat cgcgtacggc caccacacgc
     1681 gcggatggtc gagcgcgagg ccggcatcgg tctgcggggt gaacgtcacc gtctgcgtct
     1741 ggccgggggc gagcgtcagc gtgcgtttca gggcgacgcc ggcgaccgtg ccgctgatcg
     1801 tcgcctggtg cgccacgctg tcgaggttgc gcgcctccac gctcaccgtc aggtcggcgt
     1861 ggtcgaggcc gggcagcgcc agcttcggcg tcacctgcgc aaagcgcagc tcgaccgcgc
     1921 cggtgcgcac cacgtcgacg ccgcggtacg ggcccatgtt gttgtccggc ggcgtcgggt
     1981 tccagtccac ccagccgatc gacaggctgt tgcgcggatc ggccggatgc acgcgcagcg
     2041 ccagcgtgtt ggtgcccgcg tgcacccagc gggtgacgtc gagctcgtgc accgggtagg
     2101 cgccggccag ctcgtcgtgg ctggccacct ggtggccgtt cacccacacg tcggcgctgg
     2161 cgatgatgcc gttggtgcgc aacagcgtgc gcaggccggg ctgcgcgccg agcgtgaacg
     2221 tgctgcggta ccaccacggc accacgaagc ccttgccgct ggcgtcgggc gattgcaccg
     2281 cgcgcaggtt gtcgctgtgg aacaggtccg gatacaggcc gttttccagc agcccggcca
     2341 tcaccgtcgc gcggccgctc accggatacc agccggtggt ggcgtagccg gcggcggaga
     2401 cggcagcgcc gtcctgctgc gccttcgccg tggactggat ctgccagtgc gcgatcgcgg
     2461 tgcgcgtgcc ggcaccgccg tccaccgcag tcgccgcata cggcgtctgc gcgcaggcca
     2521 gcggcgcgaa cgcgagggcc gcgagtaacc ccaacacgtg cttcacggtg caagacatga
     2581 gctcagtcct cctgcagata ggcttcgcgg atttccaccg gcgcgaacgg ccacgaacgg
     2641 ttgtgccgcg cccacagcgc gaacacgacg agaccggcga cgatccaggc gccggacagg
     2701 atcagcgaca gcgtcgacgc cgacatgtag acgtacaccc agcccgccag cgcgatcacg
     2761 cacggcagcg ggtacagcca ttgccggtag ggccgcttga gccccggctg gcgccggcgc
     2821 agcaccacca gcgcggcgat ctgcgcgatc gactgcacca ggatggtggc cgccagcagc
     2881 atgttgatga cttcggcgag gtcgaagaag gtgccgatcg cggtgaccac gcccatcgtc
     2941 agcagcgtca cgtgcgggaa gccgtgcttg gcgtgcagct tgccgaacac cgacaggaac
     3001 accttctcgt gcgcggcctg gtagggcacg cgcgagccgc ccagcaggcc ggcgaacacc
     3061 gaggcgaacg cggtgacgat gatgagcacg gtcatgccgg cggcggcgag gtgcccccag
     3121 ctgtgctcga ccaccagcga ggccaccgac ttggattgcg cgatctcctg ccacggcgcc
     3181 acgccgagca cgctgatgtt gagcgcgagg tagaccacca tcatcgcgat caccgagatg
     3241 atgatcgagc ccggcatcgt gcgccccggg ttgcgcagct cgtcgcccat gtaggcggtg
     3301 gtgaagtagc cgaggtagtc gtagatgccg atgatgagcc cggcgccgag gccgacgaag
     3361 aactggctgc cgaatgcgcc cgccgggtag tcgaacgcga actccgggtg gaaatccgcg
     3421 aacccggcgg cggtcacgcc gatcaccgac accagcatga tgacccacag cgcgatggtg
     3481 atgagccgga tcgactcgat gcgccggtac agcagccagg tgaccagcgc ggtcgccgcc
     3541 aggctgacca ggtggatcgg ccaccagccc aggtgcggga agaagaagcc gaggtactcg
     3601 accatgccga tgatgccggt cgacatcagc agcgggatcg tcagcagcac ggtccagatg
     3661 aacaggaacg gcatcagctt gccggtgcgg tactggaacg cctcgcgcag gtacacgtag
     3721 gtgccgcccg agcccggcat tgccgcgccc agctcggccc acaccaggcc gtcggccatg
     3781 gcgaggatgg cgccggcgat ccagccgatc accgcctgcg gcccgcccat cgtggcgacc
     3841 atgatcggga tggtgatgaa cggcccgatg ccgcacatct gggtcatgtt gatcgcggtg
     3901 cccgaaaaca gcccgatcga gcggtggaaa ccggcggctg gcgaagtgtt ggaatcaggc
     3961 atggcgaccc ttgctgactg ggatgcccgg gcggcggcgc gccgccgccc ggaagacggt
     4021 caacggcggc gggcatgcag ccccgccgcc gagggccggc gcgttcacca ctgcccgcgc
     4081 acgccgacca tgaacatgcg ctcggagaac gtcgagtgtg ccggctggtc gggccacacc
     4141 aggtagtagt gctggtactc gttggtgagg ttggtgccgt cgaggaacac ctgcgcgtac
     4201 ttgttgatct tgtacgacac cgaggcgtcc aggtacttct gcggggcctc gtacatctcc
     4261 atgccggtga tgccgccgac cgaatccgac accgcgcgcc gcgagcggta gttgtacgcc
     4321 acgcgcgcct gcaggcggtc gtcctggtac cacaggatga ggttgcccga gcgcgtcgag
     4381 ttgtcctgga acggaatctc gtggccggcc aggtccttct cgcccgagtt gctgggcgcg
     4441 taggtaccgt tcacctcgat gccggtcttg gacaggatgc ccggcaggaa ggtgaagcct
     4501 tgccggtagt cgaactccgc gccgtggatg ctgttgccgc tgccctgcac cggctcggtg
     4561 atggtgatac agcggtcgcg caccacgccg tcctcgtcgg gcagcgtgca gttgatgacg
     4621 ctgccgttct tgatgaagct gtccacgctg atgcggaaca gcgcgaggct gaccatgctg
     4681 gtcgggttga tgtaccactc cagcgaggcc ccgtagttgg tggagcgcca cgggttcaag
     4741 ttggggttgc cggcggagtt gccctgggcg acgcggaaca gcgggccctg cggggtttcc
     4801 accagcgagt acgcgagctg caggccgccg ccccaggtgc tgaggttgag cggcatcatg
     4861 ttcttcgaat atgccaggcg cagcttcagg ctgtcggtga ggtcgagcgc gaagttcgcg
     4921 gccggcaggt agtccttgta gcggcgccgg gtgaggtcgg tgccggcatc ggccggctcg
     4981 gtaccgtagg cgccaggggc gccgctcagg tgctgggtga cgtcgaggtt ggtgtggatc
     5041 acgcgcatgc cgacgttgcc gctgtacggc atgttgccca gggtgccgct gaaatcagcc
     5101 tgcaggtagg cggtggattc cttcatccac actccccagg tgaggccagg cgccgcctgg
     5161 cgctgggtct gcgggtacag cgatcgccag aacgcctcgg ggttgtccag cgcgtgcggg
     5221 ttgaccgccc agaaagtgat gccggagccg agcaggttgg tgtactgcct ccagttgctg
     5281 gacagcggcg gcggggttgc gcccatctgc agcgcggaga tcgggccggc gcggaaatag
     5341 ccctggtcgt tgccggcggt gcagctgccg ctgtccagcg tcacgtcggc gccgacgtag
     5401 cgcaccagg
//
LOCUS       DASSVL010000521         4171 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_718200, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000521 DASSVL010000000
VERSION     DASSVL010000521.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 4171)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4171)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4171
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_718200"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1886)
                     /locus_tag="VFM52_09155"
     CDS             complement(<1..1886)
                     /locus_tag="VFM52_09155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007509480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HET8765374.1"
                     /translation="MTAALAAFHFLRPWWLLALLLLPWTVWSIRQHRSGWRALTRLVD
                     AALLPSVVRGGAQPRRTPLVLAALAWLLAVFALAGRTWNRVDAPLYTRATAQVVAISL
                     SQRMLARDVAPSRIDRARLKAHDLLVANRAGLNALIGYAGEAFVVAPLTSDVHSLGTL
                     LDAMAPDTMPVDGDNAAAAIRRGEVLIHDAKAGSGTIVLITDSADAAAQTAAREARAA
                     GVRVAVLGVGTPRGAPVPLPGGGFLHDANGSLQLAGRDDAALAALAAAGGGRYEPMSA
                     DGRDVAALHADLQTGRTAAVADAQGDQWQDRGPWLLPPLLLLAALAFRRSWLVLLALV
                     LLPALPMPAQASGWRDLWQRPDQQAAAALARGDAKQAMALAHDPAWRGAAAYRAGDYA
                     AAAKALQAAPGSDAAYNRGNALAREGKFADAIHAYDEALKRDPRNADASANRKAVEDW
                     LRQHQPPPKPQQKSGSSQGQGKSSSASGDGKQGEGQQSGKAGQDGQPQASPPGQPTDN
                     GKNPQDQKPASSSTAAGKPAPAHAGSTPPPANHAQQDQGKAKQDKSANAAPTPAQQAA
                     QQAEAARAQQALKQQLDRELGKAAPAHQLGAEAATDDAAAKLPADLRDALRRVPDDPG
                     ALLRR"
     gene            complement(1883..2860)
                     /locus_tag="VFM52_09160"
     CDS             complement(1883..2860)
                     /locus_tag="VFM52_09160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008211547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HET8765375.1"
                     /translation="MFEFAWPWWFVLLPMPWLVRRWLPPATTGAALHLPQPGLDLAAF
                     GSHPARRGPLWLLALAWLCLLAAAARPQWVGPPQAQQRSGRALLLAVDLSGSMRTPDM
                     LLAGQPVSRFAAVKAIAGNFIDRRQGDEVGLILFGSRAFLVTPLTYDLEAVRAQLQGA
                     AVGLAGTETAIGDAVAIAVKRLAALPEQARVLVLLTDGVNNAGSISPLEAARAAKAAG
                     VRIYTVGIGATRMRVPGFFGSQIVDPSADLDVPMLTTMATDTGGRFFRATDSAELANA
                     YRAIDALEPMPQAGPQRRPRHEWYPWPLAAALGLWLLVARPRWRRGGAA"
     gene            complement(2853..3362)
                     /locus_tag="VFM52_09165"
     CDS             complement(2853..3362)
                     /locus_tag="VFM52_09165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007081147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4381 family protein"
                     /protein_id="HET8765376.1"
                     /translation="MSVAAAPANGPVLRDIHLPPAPPWWPPAPGWWVLAGVVLSLALA
                     GFWLWRRRRRIGRCRRRWLAELDRVPRGADDAARALAGIHQLLRRVARLHEPASARQC
                     GEAWRTTLARVCVEPQVIARLATLDTAIYRPATAADAEAARQAARRWLHAAARPHGWR
                     RARRRATHV"
     gene            complement(3359..>4171)
                     /locus_tag="VFM52_09170"
     CDS             complement(3359..>4171)
                     /locus_tag="VFM52_09170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008211550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF58 domain-containing protein"
                     /protein_id="HET8765377.1"
                     /translation="PRAGQQSSRLFGRGMDYAESRVYQSGDDVRRLDWRLTARSGTLH
                     TKLFQEEREARLLVLLDTHASMRFGTRARYKSVQAARACAVAAWLASAAGERVGLAAF
                     GACREVLRPRSGARGALALCGALAAWDAQGPVDRSEALAQALRRVRQLRQVANRVLLV
                     SDGFSADDEARPLLLALRRHAEVGVLVIADALEHDDPPAGRFMLEHAGVRREATLAGD
                     RQRRAFRACMAAGSQRLQALAAACGVRCRVLDTRGDPLDAVVAVLGVTRSRG"
BASE COUNT          546 a         1600 c         1502 g          523 t
ORIGIN      
        1 cgccgcagca gcgcgccggg gtcgtcgggc acgcggcgca gcgcgtcgcg cagatcggcc
       61 ggcagcttcg cggccgcgtc gtcggtggcg gcctccgcac ccagttggtg cgccggcgcc
      121 gccttgccca gctcgcgatc gagctgctgc ttgagcgcct gctgcgcgcg cgcggcctcg
      181 gcctgctgcg cagcttgctg tgccggagtg ggcgcggcgt tcgccgactt gtcctgcttc
      241 gccttccctt gatcctgctg cgcatggttc gccggcggcg gcgtgctgcc ggcatgcgcc
      301 ggtgcgggtt tgcctgcggc ggtcgacgat gacgccggct tctggtcttg cgggttcttc
      361 ccgttgtccg tgggttggcc cggcggcgac gcttgtggct gtccgtcctg gcctgccttg
      421 ccggactgct ggccttcgcc ctgcttgccg tcgcccgacg cactggacga cttgccctgg
      481 ccctgcgacg acccggattt ctgctgcggc ttcggcggcg gctgatgctg gcgcagccaa
      541 tcctcgacgg ccttgcggtt ggcgctggcg tcggcgttgc gcggatcgcg cttgagcgcc
      601 tcgtcgtagg cgtggatcgc gtcggcaaac ttgccctcgc gcgccagcgc gttgccgcgg
      661 ttgtaggcgg cgtcgctgcc cggcgccgcc tgcagcgcct tggccgcggc cgcgtagtcg
      721 ccggcgcggt aggccgccgc gccgcgccag gcggggtcgt gtgcgagcgc catcgcctgc
      781 ttcgcatcgc cacgcgcgag cgccgcggcg gcctgctgat ccgggcgctg ccatagatca
      841 cgccagcctg atgcctgcgc gggcatcggc agcgccggca gcaacaccag cgccagcagc
      901 accagccaac tgcgccggaa cgcaagcgcc gccaacagca gcaacggcgg cagcagccat
      961 ggcccgcgat cctgccactg gtcgccctgc gcatcggcca cggccgcggt gcgcccggtc
     1021 tgcaggtcgg catgcagtgc ggcgacgtcg cggccgtcgg cgctcatcgg ctcgtagcgc
     1081 ccgccaccgg cggcggccag cgccgcgagc gccgcgtcgt cgcggccggc aagctgcagg
     1141 ctgccattcg catcgtgcag gaagccgccg ccgggcagcg gcaccggcgc accccgcggc
     1201 gtgccgacgc cgagcacggc aacgcgcacg ccggcggcgc gcgcctcgcg tgcggcggtt
     1261 tgcgccgcgg catcggcgct gtcggtgatg agcacgatgg ttccgctgcc ggctttcgca
     1321 tcgtgaatca agacctcgcc gcgccggatc gccgccgccg cgttgtcgcc atcgaccggc
     1381 atggtgtccg gcgccatcgc gtcgagcagg gtgccgaggc tgtgcacgtc ggaggtgagc
     1441 ggcgccacca cgaacgcctc gccggcatag ccgatcagcg cattgagtcc ggcccggttc
     1501 gccaccagca ggtcgtgcgc cttgagccgc gcgcggtcga tgcggctggg cgcgacgtcg
     1561 cgcgccagca tgcgctgcga cagcgagatg gccaccacct gcgcggtggc gcgcgtatac
     1621 agcggcgcat cgacgcgatt ccacgtccgc ccggccagcg cgaacaccgc cagcagccat
     1681 gccagcgcgg ccaatacgag cggcgtgcga cgcggctgcg cgccaccccg caccacgctc
     1741 ggcaacagcg cggcatcgac cagccgggtc aacgcgcgcc aaccactgcg gtgctgccgg
     1801 atcgaccaca cggtccacgg cagcaacagc agggcaagca gccaccacgg ccgcaggaaa
     1861 tggaacgccg cgagcgccgc cgtcatgccg cgcctccccg ccgccaacgc ggccgcgcca
     1921 ccagcagcca caggccgagc gccgcggcca gcggccacgg ataccactca tgccgcgggc
     1981 gccgctgcgg accggcctgc ggcatcggtt ccagcgcgtc gatggcgcga taggcattag
     2041 ccagctcggc gctgtcggtg gcgcggaaga accgtccgcc ggtatcggtc gccatcgtgg
     2101 tcagcatcgg gacgtcgaga tcggccgacg ggtcgacgat ctggctgccg aaaaagccgg
     2161 ggacgcgcat ccgcgtcgcg ccgatgccca cggtatagat gcgcaccccg gccgccttcg
     2221 ccgcacgcgc ggcttcgagc gggctgatgc tgccggcgtt gttgacgcca tcggtcagca
     2281 gcaccagcac gcgcgcctgc tcgggcaacg cggcgaggcg cttcaccgcg atcgccaccg
     2341 cgtcgccgat cgcggtttcg gtgccggcga ggccgaccgc cgcgccttgc agctgcgcgc
     2401 gcacggcctc caggtcgtag gtgagtgggg tgacgaggaa cgcgcgcgaa ccgaacagga
     2461 tcaggcccac ctcatcgcct tggcggcggt cgatgaaatt gccggcgatc gccttgaccg
     2521 ccgcgaaccg gctgaccggc tggcctgcca gcagcatgtc cggcgtgcgc atgctgccgg
     2581 acaggtcgac cgcgagcagc agcgcgcgcc cgctgcgctg ctgcgcctgc ggcgggccga
     2641 cccattgcgg tcgcgccgcc gcggccagca ggcacagcca cgccaatgcc agcagccaca
     2701 gcggtccgcg ccgcgccggg tggctgccga acgcggcgag atcgagcccc ggctgcggca
     2761 ggtgcagggc cgcgccggtg gtcgccggcg gcagccagcg gcgcaccagc catggcatcg
     2821 gcagcagcac gaaccaccag ggccacgcga actcaaacat gcgtggctct ccggcgcgcg
     2881 cgacgccagc catgcggccg cgccgccgca tgcagccagc ggcgtgccgc ctgccgtgcg
     2941 gcctcggcat cggctgcggt ggccgggcgg tagatggccg tatccagcgt ggcgaggcgc
     3001 gcgatcacct ggggttcgac gcacacccgc gccagcgtgg tacgccacgc ttcgccgcac
     3061 tgccgggcgg acgccggttc atgcaggcgc gccacgcggc gcagcagttg atggatgccg
     3121 gccagcgccc gcgcggcgtc atcggcgccg cgcggcacgc gatccagttc ggccagccag
     3181 cgccgccggc accgtccgat gcggcgtcgc cgacgccaca gccagaagcc ggcgagcgcc
     3241 agcgacaaaa cgacaccggc cagcacccac cagcccggcg ccggcggcca ccacggcggc
     3301 gccggcggca ggtggatgtc gcgcaacacc gggccgttcg cgggtgccgc cgccacgctc
     3361 atccgcgcga cctcgtgacg cccagcaccg ccaccacggc atcgagcgga tcgccccgcg
     3421 tatccagcac ccggcagcgc acgccgcacg ctgcggccag cgcctgcagg cgctgcgaac
     3481 cagccgccat gcatgcgcga aacgcccggc gctggcgatc gccggcgagc gtcgcctcgc
     3541 ggcgcacgcc ggcgtgctcc agcatgaacc ggccggccgg cgggtcatcg tgttcgagcg
     3601 catcggcgat caccagcacg ccgacttcgg cgtggcggcg cagcgccagc agcaagggac
     3661 gcgcctcgtc gtcggcgctg aagccgtcgc tgaccagcag cacgcggttc gccacctggc
     3721 gcagctggcg tacacgacgc agcgcttgcg ccagggcctc gctgcgatcg accgggcctt
     3781 gcgcgtccca ggccgccagc gccccgcaca gtgcgagcgc gccgcgtgcg ccggagcgcg
     3841 gacgcagcac ctcgcggcat gcgccgaatg cggccagccc gacgcgctcg ccggccgcgc
     3901 ttgccagcca cgccgccacg gcacaggcac gcgcggcctg caccgacttg taccgcgcgc
     3961 gcgtgccgaa acgcatgctg gcatgggtgt cgagcagtac cagcaggcgc gcttcgcgct
     4021 cttcctggaa cagtttggtg tgcaacgtgc cactgcgtgc ggtgagccgc cagtcgagcc
     4081 ggcgcacgtc gtcgccgctc tggtacacgc gcgactcggc gtaatccatg ccgcggccga
     4141 agaggcggct ggactgctgc ccggcgcggg g
//
LOCUS       DASSVL010000522         2145 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_138844, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000522 DASSVL010000000
VERSION     DASSVL010000522.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2145)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2145)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2145
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_138844"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..502)
                     /locus_tag="VFM52_09175"
     CDS             complement(<1..502)
                     /locus_tag="VFM52_09175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019398013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-ketoacid dehydrogenase subunit beta"
                     /protein_id="HET8765378.1"
                     /translation="MAESTNAPAITLIEAITQALAYEMRNDDAVVVLGEDVGVNGGVF
                     RATAGLQQSFGDQRVLDTPLDETTIAGLTVGMASQGLKPVAEAQFDGFMYPMVDFIVC
                     HAARMRYRTRSRLTCPMVLRVPWGGGIRAPEHHSEANESIFTNVPGLRVVMPSSPARA
                     YGLLLAA"
     gene            complement(495..1571)
                     /gene="pdhA"
                     /locus_tag="VFM52_09180"
     CDS             complement(495..1571)
                     /gene="pdhA"
                     /locus_tag="VFM52_09180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016850583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045250 - cytosolic pyruvate
                     dehydrogenase complex [Evidence IEA];
                     GO_function: GO:0004739 - pyruvate dehydrogenase
                     (acetyl-transferring) activity [Evidence IEA];
                     GO_process: GO:0006086 - acetyl-CoA biosynthetic process
                     from pyruvate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase (acetyl-transferring) E1
                     component subunit alpha"
                     /protein_id="HET8765379.1"
                     /translation="MTVAAKFEIEYLQYLDPDGKPVAELPKAFKDPKALVPLFKQMLF
                     VRTFDDKAIRLQRTGKLGTYAACLGHEATHVGIGASMRPEDVFAPSYREYGAQFMRGV
                     KPRDVLMYWGGDERGNDFEVPRNDYPWCVPISTQCLMASGAALSFKLRKQDRVAVACC
                     GDGGSSKTDFYAALNSAGAYTLPLVLCVINNGWAISVPRKAQTGAQTLAQKGLAGGLH
                     CLQVDGNDLIAVLEAMRRATERARKGEGGSVIEFMTYRLHDHTTADDARRYRGEDEVK
                     AAWTREPFIRLRNYLVKAKAWDEAQEKAWLEECAVKVDEEINAYLNTPVQPVEAMFDY
                     LYGDPPAELLQQRDAAIALEKRNG"
     gene            1721..>2145
                     /locus_tag="VFM52_09185"
     CDS             1721..>2145
                     /locus_tag="VFM52_09185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005414712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004833 - tryptophan 2,3-dioxygenase
                     activity [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0019441 - tryptophan catabolic process to
                     kynurenine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan 2,3-dioxygenase family protein"
                     /protein_id="HET8765380.1"
                     /translation="MGIDRNERPLEAGIHTDLAGRVTYGGYLRLDRLLSAQEPLSRPP
                     HHDELLFIVQHQVSELWLKLLIHELSAAIAHLQRDELGPCQKIFARCKVVLRQLTDMW
                     SVLETLTPAEYMEFREILGPSSGFQSLQYRTVEFLLGNK"
BASE COUNT          315 a          732 c          752 g          346 t
ORIGIN      
        1 tcgcggcgag cagcaggccg taggcgcgcg cgggcgagga cggcatgacc acgcgcaggc
       61 cgggcacgtt ggtgaagatc gactcgttcg cctcgctgtg gtgctccggc gcgcggatgc
      121 cgccgcccca cggcacgcgc aacaccatcg ggcaggtcag gcggctgcgg gtgcggtagc
      181 gcatgcgcgc ggcgtggcag acgatgaagt ccaccatcgg gtacatgaag ccgtcgaact
      241 gcgcctcggc gacgggcttc aagccctgcg aggccatgcc gacggtgagg ccggcgatgg
      301 tcgtctcgtc gagcggggtg tcgagcacgc gctggtcgcc gaacgactgc tgcaggccgg
      361 cggtggcgcg gaacacgccg ccgttgacgc ccacgtcctc gccgagcacg acgacggcgt
      421 cgtcgttgcg catctcgtag gccagggcct gcgtgatcgc ttcgatgagg gtgatcgcgg
      481 gtgcgttggt ggactcagcc attgcgcttc tccagcgcga tcgcggcgtc gcgctgctgc
      541 agcagctccg ccggcggatc gccgtacagg taatcgaaca tcgcttccac cggctgcacc
      601 ggcgtgttga ggtaggcgtt gatttcctcg tccaccttca ccgcgcactc ctcgagccag
      661 gccttttcct gcgcctcgtc ccaggccttc gccttgacga ggtagttgcg caggcggatg
      721 aagggctcgc gcgtccaggc ggccttgacc tcgtcctcgc cgcggtaacg gcgcgcatcg
      781 tccgcggtgg tgtggtcgtg caggcggtag gtcatgaact cgatcacgct gccgccttcg
      841 cccttgcgcg cgcgttcggt ggcgcggcgc atcgcctcga gcacggcgat gaggtcgttg
      901 ccgtccacct gcaggcagtg gaggccgccg gccaggccct tctgcgccag cgtctgcgcg
      961 ccggtctgcg ccttgcgcgg gaccgagatc gcccagccgt tgttgatcac gcacagcacc
     1021 agcggcagcg tgtacgcgcc ggcagagttc agcgcggcat agaaatcggt cttcgacgag
     1081 ccgccgtcgc cgcagcacgc gaccgcgacg cgatcctgct tccgcagctt gaacgagagc
     1141 gcggcgccgg acgccatcag gcactgcgtg gagatcggca cgcaccacgg ataatcgttg
     1201 cgcggcacct cgaaatcgtt gccgcgctcg tcgccgcccc agtacatcag cacgtcgcgc
     1261 ggcttcaccc cgcgcatgaa ctgcgcgccg tactcgcggt agctcggcgc gaacacgtcc
     1321 tcggggcgca tcgacgcgcc gatgccgacg tgggtggcct cgtggccgag gcaggcggcg
     1381 taggtaccga gcttgccggt gcgctgcagg cggatcgcct tgtcgtcgaa ggtgcgcacg
     1441 aacagcatct gcttgaacag ggggaccagc gccttcgggt ccttgaacgc cttgggcagt
     1501 tcggcgaccg gcttgccgtc cgggtccagg tactggaggt attcgatctc gaatttcgcg
     1561 gcgacggtca tggaatcggg cccggttgcg gcagaacgcg aattgtagcg aatcggcccc
     1621 ggcggccgcc cctggcgggg gcgccggacg ccctgcggcc gccggggacg cttgaccgga
     1681 gtcaagcgcg gcgcgggtcc ggccgtgcga aactgcggcg atgggcatcg atcgcaacga
     1741 acggccgctc gaggccggca tccacaccga cctggcgggc cgcgtgacct acggcggcta
     1801 cttgcgcctg gaccggctgc tgtcggcgca ggagccgctg tcgcgcccgc cgcaccacga
     1861 cgaactgctg ttcatcgtcc agcaccaggt gtccgagctc tggctgaagc tcctgatcca
     1921 cgagctgtcg gcggcgatcg cgcacctgca gcgcgacgag ctcggcccgt gccagaagat
     1981 cttcgcgcgc tgcaaggtcg tgctgcgcca actcaccgac atgtggtcgg tgctggagac
     2041 gctgacgccg gcggaataca tggagttccg cgagatcctc gggccctcat ccggcttcca
     2101 gtcgctgcag taccgcaccg tcgaattcct gctcggcaac aagaa
//
LOCUS       DASSVL010000523         4066 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_393486, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000523 DASSVL010000000
VERSION     DASSVL010000523.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 4066)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4066)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4066
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_393486"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..525)
                     /locus_tag="VFM52_09190"
     CDS             complement(<1..525)
                     /locus_tag="VFM52_09190"
                     /inference="COORDINATES: protein motif:HMM:NF012257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic nucleotide-binding domain-containing
                     protein"
                     /protein_id="HET8765381.1"
                     /translation="MLAPPADAPATSFALLPEVDLELLSRYLLLTRRKLRARQHLYRA
                     GQSFRALYLVHAGFLKTCHVTEGGREQVTGFRMRGDLLGVESIGLERHIDDAVALEDA
                     EVWELSYPAVLDACQRLPALQMRLTAALAGEIRRDRTWMQTVGVLPADERVAAFLLDM
                     AGRFARLGFSPRRFV"
     gene            960..1760
                     /locus_tag="VFM52_09195"
     CDS             960..1760
                     /locus_tag="VFM52_09195"
                     /inference="COORDINATES: protein motif:HMM:NF014868.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8765382.1"
                     /translation="MLATAGTGHPGWRRRPLHAVVNATAFVKDDGTMDLAGLAHAAGL
                     ALRAMDNAMLLAGTASGPVRIGLIGLADVLALAGESYGSARGRTRATEIVRAMADGCL
                     TANLQLAHERGAGIHGSSHVAVERLRRRGVSGDIVGEVERHGLRHADTMTLAPHPRLA
                     LLANDVADACDPLAPEHHTHPLLGAETACCDGYAFEHLRALRADTSRTETLASLPPSA
                     GIAMRAALRPWADDLDTGLHRTAGRQVPAETCAGASWTPRNGRPNGNP"
     gene            1964..3040
                     /locus_tag="VFM52_09200"
     CDS             1964..3040
                     /locus_tag="VFM52_09200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008217294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0017013 - protein flavinylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD:protein FMN transferase"
                     /protein_id="HET8765383.1"
                     /translation="MNTAPLSACAGEPISPTRRQWLKRAGQYALLGGLFAGGGWTLAR
                     LTNNLWRVCRERPLMGTSVAINCLADDREAAGVAIEAAFAHMARVAGELTRFDPASPL
                     SRLNRERVLHVVPQHLHAVLREALELSAHTQGAFDATVLPVLRYFETLRGISRLDGQN
                     DARIAEREQLVDWRRVHLDALGVRLDTPGMAITLDGIAKGYVVDQGVATLKAHGIEYG
                     IVDAGGDVHAFTGSDANRHWNVGIVDPLDPRRVAAVVQVRNAAISTSGNYRVFFSADR
                     RLFHLVNPHTGFSPQGYASMTMVAARSILADGMSTAAFSLTLPQVATHTAARDLQWLA
                     ISRDGREHWRSRELPLVAGEARTA"
     gene            3037..>4066
                     /locus_tag="VFM52_09205"
     CDS             3037..>4066
                     /locus_tag="VFM52_09205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008433409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FMN-binding protein"
                     /protein_id="HET8765384.1"
                     /translation="MNALHRLRAWLRLGVLVGLLATLSLPAFAGIDSQYPELHKTFPE
                     ATHFGDVEGTPPAAAVYQRDKVIGYVFETVMVAPVPAYSGKPINILVAIDADGGIRFA
                     RVLHQEEPILLVGIPVQKLYDFVARYIGHHVDDRIVVGNGGGGGIHIDAISSATVTSM
                     VANETIMNAALKVAASRHIIAGASDDEAAKAVTVRRDFYQPADWAALTANGAIGHLHL
                     TRGQVADAFKGQPESGLVDDPTAPPPAGHGADNFIDLWFADVTPPTVGRNLLGEAAYA
                     DLMKHLGKDDTAVAVMANGIYSFKGLGYVRGGIFDRVHLIQDGKLVLFHDTDLVQMGD
                     SPLAGKPGF"
BASE COUNT          647 a         1466 c         1367 g          586 t
ORIGIN      
        1 tacgaagcgc cgcgggctga accccagccg cgcgaaccgg ccggccatgt ccagcaggaa
       61 cgcggccacc cgctcgtcgg ccggaagcac tcccacggtc tgcatccagg tacggtcgcg
      121 gcggatttcg ccggccagcg cggcggtcag gcgcatctgc aacgcaggca gtcgctggca
      181 ggcgtcgagc acggccggat aggacagttc ccacacctcg gcatcttcca gcgcgaccgc
      241 gtcatcgatg tgacgctcga ggccgatcga ttccaccccg aggagatccc cgcgcatgcg
      301 aaagccggtg acctgttcgc gccctccttc ggtgacgtgg caggtcttga ggaaacccgc
      361 gtgcacgaga tacagcgcgc ggaacgactg gcccgcacga tagaggtgct ggcgtgccct
      421 gagcttgcgc cgggtaagca gcaggtaccg actcagcagc tccaggtcca cttccgggag
      481 cagcgcgaag cttgtcgccg gggcatcggc gggtggggcg agcacgggcg cgcaagtcat
      541 gtccatggtg gtttccggta ggcggtgacg acgaagcgac gataagcgcc tacccccggg
      601 caccgggttt cagcagcgca accatgtgta acggcctgta acaggcgcgc gattgcgcgg
      661 cccgcgttga tggcggtcaa catccgcgca ccgggaacgg gaatagtcga cggcgccgct
      721 gagaccacgc catgcacgcc tgtccgcccg cttcgccgtt caccagcctt gccgccgtgc
      781 aagcgtggga tgcgtggttc cgctggcgcg aggggacaca gctgcgcgac acggcgatcg
      841 aggacacctg gaaccgggtg gccagcaccc tggcggcagc cgaatcgcac tccccgcaac
      901 gctggcgcga ggcgtggctg gaagcactcg cgaattggcg ggtgttgccg gacgaacaag
      961 tgctggccac cgccggcacc gggcatcccg ggtggcgccg gcggccgctg catgcggtgg
     1021 tgaacgcgac cgccttcgtg aaggatgacg gcacgatgga tctcgccggc ctggcccatg
     1081 ccgccgggct ggcgctgcgt gccatggaca acgccatgct gctcgcgggc acggcgtctg
     1141 gcccggtacg aatcgggctg atcggcctgg ccgatgtcct ggcactcgcg ggcgaaagct
     1201 acggcagcgc acgtgggcgc acgcgtgcca cggaaatcgt gcgcgccatg gccgatggct
     1261 gcctgacggc caaccttcag ctcgcccacg aacggggcgc cggcatccac ggatcctccc
     1321 acgtggcggt cgagcgcctt cgccggcgcg gagtttccgg agacatcgtg ggggaagtcg
     1381 agcgccatgg cctgcgccac gccgacacga tgaccctggc tccgcatccc cgcctcgccc
     1441 tcctggccaa cgacgtggcc gacgcgtgcg acccgctcgc cccggaacat cacacgcacc
     1501 cgctgctggg cgcggaaacc gcctgctgcg acggctacgc cttcgagcac ctgcgtgcct
     1561 tgcgcgccga tacctcgcgg acggaaacgc tggcgtcgct gccgccatcg gcaggcatcg
     1621 caatgcgcgc ggcactgcga ccgtgggccg acgacctcga caccgggctg caccgcaccg
     1681 ccggcaggca ggtgcccgcc gaaacctgcg ccggggcgtc gtggaccccg cggaatggcc
     1741 gtccaaacgg aaacccatga cccgcgcccg cgccagcaga ccggcgtcat gcgcctgtgt
     1801 cattcggcca caggcggcgg cgaacccgga gttgacgacc gtcaacaatg ccgacttccc
     1861 actcccgaga atcccttccc gcgacgcgac gcgcctgcgg cacgccacgc cgatgtcctc
     1921 cggccgagcc ggaaggcacc tcccccctca cgcgaggcag gccatgaaca ccgctcccct
     1981 ctccgcctgc gccggcgaac cgatctcgcc cacccgtcgc cagtggctga agcgtgccgg
     2041 gcaatatgcg ctgctcggcg gcttgttcgc cggcggcggc tggacactgg cccggctcac
     2101 caacaatctg tggcgggtgt gccgggaacg cccgctgatg ggcacgtcgg tagccatcaa
     2161 ttgccttgcc gatgaccgcg aggctgccgg cgtggccatc gaggccgcgt tcgcgcacat
     2221 ggcgcgcgtg gccggggagc tgacccgctt cgatccggcc agcccgcttt cccggctcaa
     2281 tcgcgagcgg gtcctgcatg tggtaccgca gcaccttcat gcggtgctgc gcgaggcgct
     2341 ggaactatcc gcgcataccc agggcgcatt cgacgccacg gtactgccgg tgctgcgcta
     2401 cttcgagacg ctgcgcggca tcagccgtct ggatggccaa aacgacgcgc gcatcgcgga
     2461 acgcgagcag cttgtcgact ggcgcagggt ccacctggat gcgctcggcg tgcggctcga
     2521 cacgcccggc atggcgatca cgctggacgg catcgccaag ggttacgtgg tggatcaggg
     2581 cgtggccacg ctcaaggcgc acggcatcga atacggcatc gtggatgccg gcggcgacgt
     2641 gcatgcgttc accggcagcg atgcgaaccg gcactggaac gtgggcatcg tcgatccgct
     2701 ggacccgcgc cgggtggcgg ccgtggtcca ggtccgcaac gcggccattt ccacgtcggg
     2761 caactaccgg gtgttcttct ccgccgatcg ccggctgttc cacctcgtca atccgcatac
     2821 cggtttttcg ccgcagggct acgccagcat gacgatggtg gccgcacgct cgatcctcgc
     2881 cgacggcatg agcacggcgg cgttctcgct caccctgccg caggtcgcca cgcacaccgc
     2941 cgcgagggat ctgcaatggc tggcgatctc gcgcgacggc cgcgagcact ggcgctcgcg
     3001 cgagctgccg ctggtcgccg gggaggcccg caccgcatga atgcactgca tcggctgcgc
     3061 gcctggctcc gcctgggcgt cctcgtcggc ctgctggcca cactgtcgct gcccgcgttt
     3121 gccggcatcg acagccagta tcccgaactg cacaagacct tccccgaggc cacccatttc
     3181 ggcgacgtcg agggcacgcc gccggccgcg gccgtgtacc agcgcgacaa ggtcatcggc
     3241 tacgtcttcg agacggtgat ggtggcaccg gtgccggcct attccggcaa gccgatcaac
     3301 atcctcgtcg ccatcgatgc cgacggcggg atccgcttcg cgcgcgtgct gcaccaggag
     3361 gagccgatcc tgctggtggg catcccggtg cagaagctct acgacttcgt ggcccgctac
     3421 atcggccacc acgtggacga ccgcatcgtg gtgggcaacg gcggtggcgg cggcatccac
     3481 atcgacgcca tctccagcgc cacggtgacc tcgatggtcg ccaacgagac gatcatgaac
     3541 gccgcgctga aggtggccgc ctcgcgccac atcatcgccg gcgccagcga cgacgaggcc
     3601 gccaaggcgg tcacggtacg ccgcgacttc taccagccgg cggattgggc cgcgctcacc
     3661 gcgaacggtg cgatcggcca cctccacctc acccgcggac aggtggccga tgccttcaag
     3721 ggccagccgg aaagcggcct ggtggacgat cccaccgcgc cgccgcccgc cgggcatggc
     3781 gcggacaact tcatcgacct ctggtttgcc gacgtcacgc cgcccacggt gggccgcaac
     3841 ctgctcggcg aggccgccta cgccgacctg atgaagcacc tcggcaagga cgacaccgcc
     3901 gtggcggtga tggcgaacgg catctattcc ttcaagggcc tgggctacgt gcgcggcggc
     3961 atcttcgacc gcgtgcacct gatccaggac ggcaagctgg tgctgttcca cgacaccgac
     4021 ctggtgcaga tgggcgacag tccgctcgcc ggcaagccgg gcttca
//
LOCUS       DASSVL010000524         2296 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_859473, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000524 DASSVL010000000
VERSION     DASSVL010000524.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2296)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2296)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2296
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_859473"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..199)
                     /locus_tag="VFM52_09210"
     CDS             complement(<1..199)
                     /locus_tag="VFM52_09210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008207626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD hydrolase-like protein"
                     /protein_id="HET8765385.1"
                     /translation="MRPLPVALDGVLFDLDGTLVDSAADLHAALQVYCAEVGVPVPPY
                     AAVRAVVSRGSRAILRCAFDED"
     gene            complement(196..903)
                     /gene="ubiG"
                     /locus_tag="VFM52_09215"
     CDS             complement(196..903)
                     /gene="ubiG"
                     /locus_tag="VFM52_09215"
                     /EC_number="2.1.1.222"
                     /EC_number="2.1.1.64"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019463943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008689 - 3-demethylubiquinone-9
                     3-O-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0006744 - ubiquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 2-polyprenyl-6-hydroxyphenol
                     methylase/3-demethylubiquinol 3-O-methyltransferase UbiG"
                     /protein_id="HET8765386.1"
                     /translation="MSVAANVSAAEIARFDELASRWWDPDGESRPLHDLNPVRLDYIA
                     QRATLRGARVADVGCGGGLLSEALAKAGARVTGVDLGARVIDIARLHLHESGLTVDYR
                     QQSSADLAAAEPAAFDVVCCMELIEHVPDPAALVADLAAMLKPGGRLFMSTLNRTPAA
                     FGAAILGAEYLLRMLPRGTHHYAQFLKPSELARLLRHAGLALDDVSGLGYDPLRRKAW
                     LSRATAVNYLLCAWKPA"
     gene            complement(983..>2296)
                     /locus_tag="VFM52_09220"
     CDS             complement(983..>2296)
                     /locus_tag="VFM52_09220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008434457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRZ/ATZ family hydrolase"
                     /protein_id="HET8765387.1"
                     /translation="HPVDLLIEARWVVPVEPHGVVLEDHAVAIDGDRIVALLPVAEAR
                     AAYAPRETVRLPEHALIPGLVNAHTHNPMTLLRGLADDLPLMVWLQEHIWPAEAKVIG
                     AEFVRDGVELAVAEMLRGGTTCANENYFFPDAIGATYRKLGFRAVVGLPVIEFPTAWA
                     KTQDEYFERAAAVHDSFRGEALLTTAFAPHAPYTVSDESFARIRVLADQLDIPVHLHL
                     HETAHEVEDEKKKSGLRPFQRLQKLGLVNDRLIAVHMTQLTDGEIAACAEAGVSVVHC
                     PESNLKLASGFCPAEKLRRAGVNLAIGTDGCASNNDLDMFGEMRTAALLAKAVAQDAS
                     AFDAASALHAATLGSAQAMGLDAQIGSIEVGKQADLAAVRLSDIETQPLFHVVSQLVY
                     ATGRQQVSDVWIAGKRKLADRVLVDMDLDAIRARARAWRERIAAH"
BASE COUNT          363 a          797 c          805 g          331 t
ORIGIN      
        1 cgtcctcgtc gaacgcgcag cgcaggatgg cccggctacc acgcgacacc acggcacgca
       61 cggcggcata gggcggcacc ggtacgccga cctcggcgca atacacctgc agcgccgcgt
      121 gcagatccgc ggcgctgtcc accagcgtgc cgtcgaggtc gaacagcacg ccgtcgagtg
      181 cgacgggcaa gggcctcacg ccggcttcca tgcgcacagg agatagttca cggcagtggc
      241 ccggctcagc cacgccttgc gccgcagcgg gtcgtagccg agtccgctga catcgtcgag
      301 cgcaagcccg gcgtggcgca gcaggcgcgc cagttcggac ggcttgagga actgcgcgta
      361 atggtgggtg ccgcgcggca gcatgcgcag caggtattcg gcgccgagga tcgccgcgcc
      421 gaacgcggcc ggcgtgcgat tgagggtgga catgaagagc ctgccgccag gcttgagcat
      481 cgcggccagg tcggctacca aggcggccgg atcgggcacg tgctcgatca actccatgca
      541 gcacaccacg tcgaacgctg ccggctcggc tgcagccagg tctgcggaag actgctggcg
      601 gtaatccacc gtcaacccgg attcgtgcag gtgcagacgc gcgatgtcga tcacccgcgc
      661 gccgaggtcg acgccggtca cccgtgcgcc ggccttggcc agcgcttcgc tgagcaggcc
      721 gccgccgcag ccgacgtcgg ccacgcgggc gccgcgcaac gtggcgcgtt gcgcgatgta
      781 atcgaggcgc accgggttca ggtcatgcaa cggacgcgac tcgccatccg ggtcccacca
      841 gcgcgaggca agctcgtcga agcgggcgat ttcggcagcg ctgacattgg cggccacgga
      901 catggcaatt cctccacacg aaacgcgagt ctacggggcg ggcagtacgc acgccgtgat
      961 ctgccacaag gcgcgccggc gctcagtgtg ccgcaatgcg ctcgcgccag gcgcgggcgc
     1021 gggcgcggat cgcatcaaga tccatgtcga ccagcacacg gtcggccagc ttgcgcttgc
     1081 cggcgatcca cacgtcgctc acctgctggc ggccggtggc atagaccagc tgcgaaacca
     1141 cgtggaacag cggctgggtc tcgatgtcgg acaacctcac cgccgccagg tcggcctgct
     1201 tgccgacctc gatcgaaccg atctgcgcgt ccagccccat cgcctgcgca ctgccgagcg
     1261 tggccgcgtg cagcgcggac gccgcgtcga atgcggacgc atcctgcgcc accgccttcg
     1321 ccagcagcgc cgcggtgcgc atctcgccga acatgtccag gtcgttgttg gacgcacagc
     1381 cgtcggtgcc gatggcgagg ttcacccccg cgcgccgcag cttttcggcc ggacagaacc
     1441 cggaggccag cttgaggttc gactccgggc agtgcaccac cgacacgccg gcctcggcgc
     1501 aggcggcaat ttcgccgtcg gtgagctggg tcatgtgcac cgcgatcagg cggtcgttga
     1561 ccaggcccag tttctgcagg cgctggaacg ggcgcaggcc ggactttttc ttctcgtcct
     1621 ccacctcgtg cgcggtctcg tgcagatgca ggtgcaccgg gatgtcgagc tggtcggcca
     1681 gcacgcggat gcgcgcaaag ctctcgtccg acacggtgta cggcgcatgc ggcgcaaacg
     1741 cggtggtgag cagggcttcg ccgcggaagc tgtcgtgcac ggcagctgcc cgctcgaaat
     1801 actcgtcctg cgtcttcgcc cacgcggtgg ggaactcgat caccggcagg ccgacgacgg
     1861 cgcggaagcc gagcttgcgg taggtcgcac cgatcgcgtc cgggaaaaag tagttctcgt
     1921 tggcgcaggt ggtgccgccg cgcagcatct cggccaccgc gagctccacg ccgtcgcgca
     1981 cgaactcggc accgatcacc ttggcttccg ccggccagat gtgctcctgc agccacacca
     2041 tcagcggcag gtcgtcggcc aggccgcgca gcagggtcat cgggttgtgc gtgtgggcgt
     2101 tgaccaggcc ggggatgagg gcgtgctcgg gcaggcgcac ggtttcgcgc ggcgcgtagg
     2161 cggcgcgagc ctcggcgacc ggcagcagcg cgacgatgcg gtcgccgtcg atcgccaccg
     2221 cgtggtcttc cagcaccacg ccgtgcggtt cgaccgggac gacccagcgg gcttcgatca
     2281 gcaggtcgac ggggtg
//
LOCUS       DASSVL010000525         3892 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1241090,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000525 DASSVL010000000
VERSION     DASSVL010000525.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3892)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3892)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3892
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1241090"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            76..990
                     /gene="lpxC"
                     /locus_tag="VFM52_09225"
     CDS             76..990
                     /gene="lpxC"
                     /locus_tag="VFM52_09225"
                     /EC_number="3.5.1.108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015448703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008759 - UDP-3-O-[3-hydroxymyristoyl]
                     N-acetylglucosamine deacetylase activity [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-acyl-N-acetylglucosamine deacetylase"
                     /protein_id="HET8765388.1"
                     /translation="MIRQRTLKNVVRATGVGLHTGDKVYMTLRPAAPNTGIVFRRTDL
                     NPPVEIRARQDKVGDTRLSTTLVNGDVRVATVEHLLSAMAGLGIDNAYVDLSAPEVPI
                     MDGSAGPFVFLLQSAGIEEQDATKRFIRIKKPVRVQEGDKWASFEPFEGFKVGFSIEF
                     NHPIISKRTSHAEIDFSTTSFVKEVSRARTFGFMRDIEMLREHNLALGGSMDNAVVLD
                     DYRVLNEDGLRYEDEFVKHKILDAIGDLYLLGHSLIGAYNAHKSGHELNNKLLRTLVA
                     DASAWEEVSFKEEPAVSPISYSHPAQAI"
     gene            complement(1039..1497)
                     /locus_tag="VFM52_09230"
     CDS             complement(1039..1497)
                     /locus_tag="VFM52_09230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007509323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DciA family protein"
                     /protein_id="HET8765389.1"
                     /translation="MSRAKSHAAGPRPLGACSNFASLARRSAVLDALDRALRQTLPLP
                     LRDEVRFADRRGSRLVFLASSPAWATRLRLMQASIFAAARSLDVPADALVVKVTPLPR
                     ITLATQPERSLSATAAAHLRAVAATAGDPEWRALYARLAATATETKPPKR"
     gene            1688..>3892
                     /gene="secA"
                     /locus_tag="VFM52_09235"
     CDS             1688..>3892
                     /gene="secA"
                     /locus_tag="VFM52_09235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010340116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006605 - protein targeting [Evidence IEA];
                     GO_process: GO:0006886 - intracellular protein transport
                     [Evidence IEA];
                     GO_process: GO:0017038 - protein import [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecA"
                     /protein_id="HET8765390.1"
                     /translation="MLNRALTSLFGSRNERVVRQLHRTVGRINALEPQFEKLTDDELR
                     GKTVAFKERFAQGESLDKLLPEAFATVREGAKRVLGMRHYDVQLIGGIVLHQGKIAEM
                     RTGEGKTLVATLPVYLNAIAGKGVHVVTVNDYLARRDSAQMGKLYGFLGLTTDVVWPG
                     MDHADKPKAYAADITYGTNNEFGFDYLRDNMALSKEQRYQRGLNYAIVDEVDSILIDE
                     ARTPLIISGPAEDSPQLYIAVNKIVPRMVRQKEEEGEGDFWVDEKQKQVHLSEDGMEH
                     AEEYLHQAGVITADSSLYDAKNLAVVHHLNAALRANAIYQRDVDYIVRDGEVIIVDEF
                     TGRTLPGRRWSDGLHQAVEAKEGVPIQRENQTLATVTFQNLFRMYKKLSGMTGTADTE
                     AYEFQSIYGLEVVVIPTNKPMIRKDNPDLVFLGQQAKYNSVIEDIKACHARKQPVLVG
                     TTSIEVSELLSQQLDKAHVVHEVLNAKQHEREAQIVAQAGRPGQVTIATNMAGRGTDI
                     VLGGSLEAELAALPAEAGDGDRAKVKAEWQQRHEAVLAAGGLHIIGTERHESRRIDNQ
                     LRGRSGRQGDPGSSRFYLSLEDNLLRIFGGEGLIRWMKRFGMKENDALEDKMISRQIE
                     KAQRKVEQHNFDIRKHLLEFDDVANDQRKVIYGQRNELLEGDDVSATVADIRQDVIET
                     MVRNFVPPDSVDEQWDIPGLDRELESKFGLALDLPKWLESQSEMDAQMLLDHV"
BASE COUNT          746 a         1274 c         1290 g          582 t
ORIGIN      
        1 cagtgcggca gaaaatgccc aggaggggcg gctgacgatg tataatcaaa catttaaccg
       61 cccgctgggg cgcacatgat cagacagcga acgctcaaga acgtggtccg cgccaccggc
      121 gtcggcttgc acaccggtga caaggtgtac atgacgctgc gccctgccgc ccccaacacc
      181 ggcatcgttt tccgccgcac cgacctcaac ccgccggtcg aaatccgcgc gcggcaggac
      241 aaggtgggcg atacccggct ttccaccacg ctggtgaacg gcgacgtccg cgtcgccacc
      301 gtggaacacc tgctttccgc catggccggg ctgggcatcg acaacgccta cgtcgatctt
      361 tccgcgccgg aagtgccgat catggacggc agcgccggcc ccttcgtgtt cctgctgcag
      421 tccgcgggta tcgaggagca ggatgccacc aagcgcttca tccgcatcaa gaagccggtg
      481 agggtgcagg aaggcgacaa atgggccagc ttcgagccgt tcgagggctt caaggtcggc
      541 ttctcgatcg agttcaacca cccgatcatc tccaagcgca cctcgcacgc cgagatcgac
      601 ttttccacca cctcgttcgt gaaggaagtc agccgcgccc gcacctttgg tttcatgcgc
      661 gacatcgaga tgctgcgtga gcacaacctc gcgctcggcg gctcgatgga caacgccgtg
      721 gtgctcgacg actatcgcgt gctgaacgag gatggcctgc gctacgagga cgagttcgtc
      781 aagcacaaga tcctcgacgc gatcggcgat ctgtacctgc tcggccacag cctgatcggc
      841 gcctacaacg cgcacaagtc gggccacgag ctcaacaaca agctgttgcg cacgctggtg
      901 gcggatgcct cggcgtggga agaggtgagc ttcaaggagg agccggcggt gtcgccgatc
      961 tcctacagcc accccgcgca ggcgatctga gcgaacctgc ccggttgttt ccgaccgccg
     1021 cgccgcaagg tgcggcggtc agcgtttcgg gggcttggtt tctgtcgcgg tcgcggcgag
     1081 gcgggcgtac agcgcacgcc attccggatc gccggcggtg gcggcgaccg cgcgcaggtg
     1141 cgcggcggcg gtcgccgaca agctgcgttc cggttgggtt gcgagcgtga tgcgcggcag
     1201 cggggtcact ttcaccacca gcgcgtcggc gggcacgtcg aggctgcgcg cggcggcgaa
     1261 gatcgatgcc tgcatcaggc gcaagcgcgt ggcccacgcc ggcgagctgg ccaggaacac
     1321 cagccgcgag ccgcgccggt ccgcgaaccg cacctcgtca cgcagcggca gcggcaaggt
     1381 ctggcgcaag gcgcggtcga gcgcgtccag cacggcactg cgccgggcaa ggcttgcgaa
     1441 attgctgcac gcgccgagcg ggcgtggacc ggcagcatgc gatttggcgc gggacatcga
     1501 tgggcgatcc gggcgggcgt gacgcggcca tcataacggc cggaacgcgc ccgccgcggc
     1561 cttgaaatcg atgccgcgtg tcgccacccg tggctaccga gccgcgcggc atgccgccgg
     1621 taagcgtgta gtaacatgct cgattggccc gcgatgcggg ccgttgtccc atccacccgg
     1681 aaattcgatg ctcaatcgtg cccttaccag cctgttcggc agccgcaacg aacgcgtcgt
     1741 gcgccagttg catcggaccg tcgggcgcat caacgcgctc gagccccagt tcgagaaatt
     1801 gaccgacgat gagctgcgcg gcaagacggt tgcgttcaag gaacgtttcg cgcagggcga
     1861 gtccctcgac aagctgctgc cggaggcgtt tgccaccgtg cgcgaaggcg ccaagcgcgt
     1921 gctcggcatg cgccactacg acgtgcagct gatcggcggc atcgtgttgc accagggcaa
     1981 gatcgccgag atgcgcaccg gcgaaggcaa gaccctggtg gcgacgctgc cggtgtactt
     2041 gaacgcgatt gcaggcaagg gcgtgcacgt ggtcaccgtg aacgactacc tcgcgcgtcg
     2101 cgactcggcg cagatgggca agttgtacgg ctttctcggg ctcaccaccg acgtggtgtg
     2161 gccgggcatg gaccacgccg acaagccgaa ggcctacgcc gccgacatca cctacggcac
     2221 caacaacgaa ttcggcttcg actacctgcg cgacaacatg gcgctcagca aggagcagcg
     2281 ctaccagcgt ggcctgaact acgcgatcgt cgacgaggtg gattcgatcc tgatcgacga
     2341 ggcgcgcacg ccgctgatca tttccggccc ggccgaggat tccccgcagc tctacatcgc
     2401 ggtgaacaag atcgtgccgc gcatggtgcg ccagaaggaa gaggaaggcg agggcgactt
     2461 ctgggtcgac gaaaaacaaa agcaagtgca cctgtccgaa gacggcatgg agcacgccga
     2521 ggaatacctg caccaggccg gcgtcatcac cgccgacagc agcctttacg atgccaagaa
     2581 cctagcggtg gtgcatcacc tcaacgcggc gctgcgcgcc aacgcgatct accagcgcga
     2641 cgtcgactac atcgtgcgcg atggcgaggt catcatcgtc gatgagttca ccggccgtac
     2701 gctgccgggc cgtcgctggt cggacggcct gcaccaggcg gtggaggcga aggaaggcgt
     2761 gccgatccag cgcgagaacc agacgctggc gacggtcacc ttccagaacc tgttccgcat
     2821 gtacaagaag ctgtccggca tgaccggtac ggcggatacc gaggcctacg agttccagag
     2881 catctacggg ctggaagtgg tggtgatccc caccaacaag ccgatgatcc gcaaggacaa
     2941 cccggatctg gtgttcctcg gccagcaggc caagtacaac tcggtgatcg aggacatcaa
     3001 ggcctgccat gcgcgcaagc agccggtgct ggtcggcacc acctcgatcg aggtgtccga
     3061 gctcctgtcc cagcagctcg acaaggcgca cgtcgtgcac gaggtgctga acgcgaagca
     3121 gcatgagcgc gaggcgcaga tcgtcgccca ggccgggcgg ccggggcagg tcacgatcgc
     3181 caccaacatg gccggtcgcg gtaccgacat cgtgcttggc ggcagcctcg aggccgagct
     3241 tgcggcgttg ccggccgagg ccggcgacgg cgatcgtgcg aaggtcaagg ccgagtggca
     3301 gcaacgccac gaggcggtgc tcgccgctgg cggcctgcac atcatcggca ccgagcgcca
     3361 cgagtcgcgg cgcatcgaca accagctgcg cggccgctcc ggccgccagg gcgaccccgg
     3421 ctcctcgcgc ttctacctgt cgctggagga caacctgctg cgcatcttcg gcggcgaagg
     3481 cctgatccgc tggatgaagc gcttcggcat gaaggaaaac gacgcgctcg aggacaagat
     3541 gatctcgcgc cagatcgaga aggcgcagcg caaggtcgag cagcacaact tcgacatccg
     3601 caagcacctg cttgaattcg acgacgtcgc caacgaccag cgcaaggtga tctacggcca
     3661 gcgcaacgag ctcctggaag gcgacgacgt gtcggccacc gtggccgaca tccgccagga
     3721 cgtgatcgag accatggtgc gcaacttcgt gccgccggat tcggtcgacg agcaatggga
     3781 catccccggc ctcgatcgcg agctggaatc caagttcggc ctcgcgctcg acctgccgaa
     3841 gtggctggaa agccagtcgg agatggacgc ccagatgctg ctcgaccatg tg
//
LOCUS       DASSVL010000526         3150 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_294792, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000526 DASSVL010000000
VERSION     DASSVL010000526.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3150)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3150)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3150
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_294792"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..579
                     /locus_tag="VFM52_09240"
     CDS             <1..579
                     /locus_tag="VFM52_09240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012510650.1"
                     /note="decatenates newly replicated chromosomal DNA and
                     relaxes positive and negative DNA supercoiling; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase IV subunit B"
                     /protein_id="HET8765391.1"
                     /translation="PLRGKILNTWEVESNSVLASEEVHNLAVAIGCDPGTNDLSGLRY
                     GKVIVLADADSDGLHIATLLSALFLRHFPHLVSEGHVFVAMPPLFRVDVGKQVFYCLD
                     EAEKQAMLQKVEREKMRGTVTVTRFKGLGEMNPPQLRESTIHPDTRRLVQLTIEAEDG
                     TAKVMDLLLAKKRAGDRKAWLEEKGDLATLEA"
     gene            775..1314
                     /locus_tag="VFM52_09245"
     CDS             775..1314
                     /locus_tag="VFM52_09245"
                     /EC_number="1.13.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008208248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000334 - 3-hydroxyanthranilate
                     3,4-dioxygenase activity [Evidence IEA];
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyanthranilate 3,4-dioxygenase"
                     /protein_id="HET8765392.1"
                     /translation="MSLTPPFALQRWIDGHRHLLKPPVGNKCIVDGDFIVMIVGGPNA
                     RTDYHWDEGPEFFYQLEGEMVLHVQDDGQKRDLPLHAGEMFYLPPRVPHSPERMPDSV
                     GLVIERKRLPHEKDGLLWYCDACNHKLYEEYFTLQSIEQDFPPVFERYYRSLAARTCT
                     ACGHVNPAPAHYAKDAEPA"
     gene            complement(1388..1939)
                     /locus_tag="VFM52_09250"
     CDS             complement(1388..1939)
                     /locus_tag="VFM52_09250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015447352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HET8765393.1"
                     /translation="MPRFFPRLAAAFGDYLARYPDEGEAVADFEAFLASDPAVFERGH
                     RVGHFTGSAWLVSADGERVLLTHHRKLDRWLQLGGHADGDSELARVALREAGEESGLT
                     GLTVDARIFDLDAHRIPARGNEPEHWHYDVRHVVHATVSEHFVVSDESLALAWRPIPD
                     LVHDADADPSLRRMARKWVSRPR"
     gene            2099..>3150
                     /locus_tag="VFM52_09255"
     CDS             2099..>3150
                     /locus_tag="VFM52_09255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007513030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HET8765394.1"
                     /translation="MLFKRVKPIDQIIATAEKKGLTRQLGAFQLTMLGIGAIIGTGIF
                     VLTAEAGQKAGPGMMVSFVIAAIICALAALAYAELASMVPVAGSAYTYTYGVLGEGTA
                     WVVGWALVLEYTIAASTVCVGWAGYVNGLLVHAGYGLPEFLRVGPMDGGSFNLLACLI
                     GLAITGLLVIGTSKSAKVNTVLVLIKIIALTAFIIVALPAVKDPNFTPFVPNGWGSPM
                     GGIGVLGAAASIVFAYIGFDAISTAAEETKNPNRNIPIALIGSLGVCTIYYLLVSYGA
                     VGSVGAQPLMDAHGVAYEAGTPAFAEACKSAAESLVCSKEALAQVVRQLGHTNVAAFI
                     AFAASIALPSVILTMT"
BASE COUNT          530 a         1100 c         1010 g          510 t
ORIGIN      
        1 ccgctgcgcg gcaagatcct caacacctgg gaagtcgaat cgaactcggt gctcgcctcc
       61 gaggaggtgc acaacctcgc cgtcgccatc ggctgcgacc ccggcaccaa cgacctttcc
      121 ggcctgcgct acggcaaggt catcgtgctc gccgatgccg attccgacgg cctgcacatc
      181 gccaccctgc tttcggcact gttcctgcgc cacttcccgc acctggtcag cgagggccat
      241 gtgttcgtcg ccatgccgcc gctgttccgc gtcgacgtcg gcaagcaggt gttctactgc
      301 ctggacgagg ccgagaaaca ggcgatgctg caaaaggtcg agcgcgagaa gatgcgcggc
      361 acggtcaccg tcacccgctt caaggggctg ggcgaaatga acccgccgca gctgcgcgag
      421 tcgaccatcc accccgacac ccgccgcctc gtgcagctca ccatcgaagc cgaggacggc
      481 acggccaagg tgatggactt gctgctggca aaaaagcggg ccggtgaccg caaggcttgg
      541 ctggaggaaa aaggcgacct cgccacgctg gaggcatgag gacgggtcgg ggctcgtgat
      601 tcgtcagcgc gaaggcgcac cgcgatgcct tgcgggtcgg gctctgcgaa gggcttgtcg
      661 agccgaagcc caccccacgg gttggcggcg cgcctgtcaa cctgatgccg atcagacggt
      721 atacagacgc cagcgattac gctgcacgcc gttgcggtcc atgagatttc cgccatgtcc
      781 ctgactcccc cattcgcgct ccagcgctgg atcgacggcc atcgccacct gctcaagccg
      841 ccggtcggca acaagtgcat cgtcgacggc gatttcatcg tgatgatcgt cggcgggccg
      901 aacgcgcgca ccgactatca ctgggacgaa ggccccgagt tcttctacca gctcgaaggc
      961 gagatggtgc tgcatgtgca ggacgacggc cagaagcgcg acctgccgct gcatgccggc
     1021 gagatgttct acctgccgcc gcgcgtgccg cattcgccgg agcgcatgcc cgattcggtc
     1081 ggcctggtga tcgagcgcaa gcgcctgccg cacgagaagg acggcctgct gtggtactgc
     1141 gatgcctgca accacaagct gtacgaggag tacttcaccc tgcaaagcat cgagcaggac
     1201 ttcccgccgg tcttcgaacg ctactaccgc tcgctcgcgg cccgtacctg cactgcctgc
     1261 ggccacgtca acccggcgcc ggcgcactac gcgaaagacg ccgaacccgc ctgaccgccc
     1321 gctgcgggtc ggattcatcc cgacctcgaa tcgcgcgggc cgggttgaaa gccgacccgc
     1381 atgccgttca acgcggccgg ctcacccatt tgcgggccat gcgccgcagc gacgggtcgg
     1441 cgtcggcatc gtgcacgagg tcggggatcg gtcgccacgc cagcgccagc gactcgtcgc
     1501 tgacgacgaa gtgctcgctc accgtggcgt gcaccacatg ccgcacgtcg taatgccaat
     1561 gctccggctc gttgccgcgc gccgggatgc ggtgcgcgtc gagatcgaaa atccgcgcgt
     1621 cgaccgtcaa gccggtcagc cccgactcct cgcccgcctc gcgcaaggcg acgcgggcaa
     1681 gctcgctgtc gccgtcggcg tggccgccca gttgcagcca gcgatcgagc ttgcggtgat
     1741 gggtgagcag cacccgctcg ccgtcagcgc tcaccagcca cgccgacccg gtgaaatgcc
     1801 cgacccgatg gccgcgctcg aacaccgccg gatcggaagc aaggaacgcc tcgaaatcgg
     1861 caacggcctc gccctcatcc ggatagcggg cgaggtagtc gccgaaagcg gccgcaaggc
     1921 gcgggaaaaa ccggggcatg acttgtggca cgcgcggcgg aaaaggcggc aattctagct
     1981 gcatcgcgtc ttgtaccggt gcgcgcggct ccgctatggt tggccgtccg ccggcccgct
     2041 gcgccatgca tcgcgctccc gttcgcgcgc ggcgtcgtca tcccatgggg agccatgcat
     2101 gctgttcaag cgcgtcaagc cgatcgacca gatcatcgcc acggcggaaa agaaaggtct
     2161 cacccgccag ctcggcgcgt tccagctcac catgctcggc atcggcgcca tcatcggcac
     2221 cggcatcttc gtactcactg ccgaagcagg ccagaaggcc ggtccgggga tgatggtttc
     2281 cttcgtgatc gcggccatca tctgcgcact cgcggccctg gcctatgccg aactcgcctc
     2341 gatggtgccg gtcgcgggct ccgcctacac ctatacctat ggcgtgctcg gcgaaggcac
     2401 cgcatgggtc gtcggctggg ccctggtgct cgaatacacg attgccgcca gtaccgtgtg
     2461 cgtcggctgg gccggctacg tcaacggctt gctggtgcac gccggctacg gattgcccga
     2521 gttcctgcgc gtgggcccga tggacggcgg cagcttcaac ctgctggcct gcctgatcgg
     2581 cctggcgatt accggcctgc tggtgatcgg cacctcgaag tcggccaagg tcaacaccgt
     2641 actggtgctg atcaagatca tcgcgctcac cgccttcatc atcgtcgcgc tgccggcggt
     2701 gaaggacccg aacttcacgc cgttcgtgcc caatggctgg ggtagcccga tgggcggcat
     2761 cggcgtgctg ggcgcggcgg cctccatcgt gttcgcctac atcggcttcg acgccatctc
     2821 gacagcggcc gaggaaacca agaacccgaa ccgcaacatc ccgatcgccc tgatcggctc
     2881 gctgggcgtc tgcaccatct actacctgct ggtgagctac ggcgcagtgg gttcggtagg
     2941 cgcgcagccg ctgatggacg cgcatggcgt ggcctacgag gcgggcacgc cggcgttcgc
     3001 cgaggcctgc aagagcgccg ccgaatcgct ggtgtgcagc aaggaggcgc tggcccaggt
     3061 ggtgcgccag ctcggccaca ccaacgtcgc tgccttcatc gccttcgccg cgagcatcgc
     3121 gctgccgtcg gtgatcctca ccatgacgta
//
LOCUS       DASSVL010000527         3282 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_492323, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000527 DASSVL010000000
VERSION     DASSVL010000527.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3282)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3282)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3282
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_492323"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..212
                     /locus_tag="VFM52_09260"
     CDS             <1..212
                     /locus_tag="VFM52_09260"
                     /inference="COORDINATES: protein motif:HMM:NF016254.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="pilus assembly protein PilP"
                     /protein_id="HET8765395.1"
                     /translation="TITQKNETFALVKAGPNLYRVRKGNYMGQNFGVITEIDEAQISL
                     KELVQDSTGDWVERMSSLQLVEAKR"
     gene            209..2338
                     /locus_tag="VFM52_09265"
     CDS             209..2338
                     /locus_tag="VFM52_09265"
                     /inference="COORDINATES: protein motif:HMM:TIGR02515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus secretin PilQ"
                     /protein_id="HET8765396.1"
                     /translation="MNTKKAGAILPAFLVWLAGLGICAAQTNSIDSFHVNQEAGRTVV
                     RITTKEPLKSVPPNFSTANPARIVFDFPNTVNALGRSAQDIGQGELRSMNVVQGADRT
                     RLVLNLRRPLGHEAKLDGNTLVVTLAEAPATQSSSTVSTPFAEGRQDVKHAVRDIDFR
                     RGRAGEGRVVVDLSDTTTGIDIRVQGQNIVVDFLKTSLPDNLRRRLDVVDFGTPVNSV
                     STFQQADNVRMVIEPKGQWEHNAYQSDTQFVLEVKPITADPSRAAAQKGRYTGERLSL
                     NFQNVEVRAVLNVIADFTDLNIITSDTVQGNITLRLKDVPWDQALEIILQTRGLDSRR
                     SGNVIWIAPRDELATREKLQLEAANQIQDLEQTRTESFQMNYQKAVDVQKLLSDPTQR
                     ILSKRGSAVVDARTNTLFVQDTPSRLEEVRRLIAKIDVATRQVMIEARIVEANDAFSK
                     NLGARLGYTDLRFLADPTRPAGSAIGGITSGPRVLFSGDRLGVGILTGQTPDPGTGYI
                     PNSQNVNLPAAGLNSFSAGQFAFSLFTSSMSRFINIELSALEADGKGKIIASPRVLTA
                     DQVEALIEQGTELPYQQATSSGATAVSFRKANLALKVKPQITPEGNVIMTLDVNKDQP
                     GATTPAGVAINTKHVKTEVLVENGGTVVIGGIYEQNDRTDVTKIPLLGDIPIVGWLFK
                     NTTTTSAKTELLVFITPRVVNERLTIR"
     gene            2414..2947
                     /gene="aroK"
                     /locus_tag="VFM52_09270"
     CDS             2414..2947
                     /gene="aroK"
                     /locus_tag="VFM52_09270"
                     /EC_number="2.7.1.71"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018971243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate kinase AroK"
                     /protein_id="HET8765397.1"
                     /translation="MEQAANIFLVGMMGAGKTTVGRTLARRLKLRFVDSDHEIEARCG
                     VKIPVIFEIEGEAGFRSREAQALAELTVLQGIVLATGGGAVLREESRRLLAARGIVIY
                     LRATPEHLFERVRQDRNRPLLATGDPLERLRALYRERDPLYREVADLVIDTGRQSVQV
                     LARALLEQLGARWKASA"
     gene            2929..>3282
                     /locus_tag="VFM52_09275"
     CDS             2929..>3282
                     /locus_tag="VFM52_09275"
                     /inference="COORDINATES: protein motif:HMM:NF013887.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-dehydroquinate synthase"
                     /protein_id="HET8765398.1"
                     /translation="MESLRVALGSRSYPVHIGTGLAGSAQLYAPHRAGGRVAVVTNAV
                     VAPLYLEAVKRASGASVEIVLPDGEAAKSWETLNRVFDALLEARCGRDSLIVALGGGV
                     IGDLAGFAAAVYQRGV"
BASE COUNT          582 a         1145 c         1098 g          457 t
ORIGIN      
        1 gcaccatcac gcagaagaac gaaacgttcg ccctggtcaa ggcggggccc aacctctacc
       61 gggtgcgcaa gggcaactac atggggcaga acttcggcgt gatcacggag atcgacgaag
      121 cgcagatcag cctcaaggag ctggtgcagg actcgaccgg cgactgggtg gaacgcatga
      181 gctcgctgca actggtggag gcaaaacgat gaataccaag aaagccggcg ccattctccc
      241 cgcgttcctt gtctggctcg cgggcctggg aatctgcgcg gcgcagacca acagcatcga
      301 cagcttccac gtcaaccagg aagccggccg caccgtggtg cgcatcacca ccaaggagcc
      361 gctgaagagc gtgccgccga acttctccac cgccaacccg gcgcgcatcg tgttcgattt
      421 tccgaacacc gtgaacgcgc tcggacgctc ggcgcaggac atcggccagg gcgagctgcg
      481 cagcatgaac gtggtgcagg gcgcggatcg cacccgcctg gtgctcaacc tgcgccgccc
      541 gctcggccat gaggccaagc tcgacggcaa cacgctggtg gtcacgctcg ccgaggcgcc
      601 cgccacgcag agctccagca ccgtcagcac gccgttcgcc gagggccgcc aggacgtcaa
      661 gcacgcggtg cgcgacattg atttccgccg cggccgcgcc ggcgagggcc gcgtggtggt
      721 cgatctttcc gataccacga ccggcatcga catccgcgtg caggggcaga acatcgtggt
      781 cgacttcctc aagacctcgc tgcccgacaa cctgcgccgg cgcctcgacg tggtcgattt
      841 cggcaccccg gtgaacagcg tgagcacctt ccagcaggcc gacaacgtgc gcatggtgat
      901 cgagccgaag ggccagtggg agcacaacgc ctaccagtcc gacacgcagt tcgtgctcga
      961 ggtgaagccg attaccgccg acccgtcgcg cgccgcggcg cagaagggcc gctacaccgg
     1021 cgagcgcctg tcgctcaact tccagaacgt cgaagtgcgc gcggtgctga acgtgatcgc
     1081 cgacttcacc gacctgaaca tcatcaccag cgacaccgtg cagggcaaca tcacgctgcg
     1141 cctgaaggac gtgccgtggg accaggcgct cgagatcatc ctgcagacgc gcggcctgga
     1201 cagccggcgc agcggcaacg tgatctggat cgcgccgcgc gacgagctcg ccacgcgcga
     1261 gaagctgcag ctcgaggcgg cgaaccagat ccaggacctg gagcagaccc gcaccgagtc
     1321 gttccagatg aactaccaga aggcggtcga cgtgcagaag ctgctgtcgg atccgaccca
     1381 gcgcatcctg tcgaagcgcg gcagcgcggt ggtcgacgcg cgcaccaaca cgctgttcgt
     1441 gcaggacacg ccgagccgcc tggaggaagt gcgccgcctg atcgccaaga tcgacgtggc
     1501 gacgcgccag gtgatgatcg aggcgcgcat cgtcgaggcg aacgatgcgt tcagcaagaa
     1561 cctcggcgcg cgcctcggct acaccgacct gcgcttcctg gcggacccga cgcggcccgc
     1621 gggctcggcg atcggcggca ttaccagcgg gccgcgcgtg ctgttcagcg gcgaccgcct
     1681 cggcgtgggc attctcaccg gccagacgcc cgacccgggc accggctata tcccgaacag
     1741 ccagaacgtc aacctgccgg cggcgggcct gaactcgttc agcgccggcc agttcgcgtt
     1801 ctcgctcttc accagctcga tgtcgcgctt catcaacatc gagctctcgg cgctggaagc
     1861 cgacggcaag ggcaagatca tcgccagccc gcgcgtgctg accgccgacc aggtcgaggc
     1921 gctgatcgag cagggcaccg agctgcccta ccagcaggcc acctcgtcgg gcgccaccgc
     1981 ggtgtcgttc cgcaaggcca acctggcgct caaggtgaag ccgcagatca cgcccgaagg
     2041 gaacgtgatc atgactttgg atgtgaacaa ggaccagccg ggcgccacca cgccggcggg
     2101 cgtggcgatc aacaccaagc atgttaagac cgaagtgctg gtcgagaacg gcggcacggt
     2161 agtgatcggc ggaatctacg agcagaacga ccgcaccgac gtcaccaaga tcccgctcct
     2221 cggcgacatc ccgatcgtcg gctggctttt caagaacacc acgaccacgt ccgcgaagac
     2281 ggagctgctg gtgttcatca cgccgcgcgt cgtcaacgag cgcctcacca ttcgctaggc
     2341 ccgccgcctt cctttcttca gagccgcgcg gcggccggga cctcccggcc gtttttgttc
     2401 ctacaatgca cccatggagc aggcggcgaa tatctttctc gtcggcatga tgggcgccgg
     2461 caagaccacc gtcgggcgca cgctggcgcg gcggctgaag ctgcgcttcg tcgactccga
     2521 ccacgagatc gaggcgcgct gcggcgtgaa gatccccgtc atcttcgaga tcgagggcga
     2581 ggcggggttt cgcagccgcg aggcgcaggc gctggccgag ctcaccgtgc tccaaggcat
     2641 cgtgctggcg acgggcgggg gtgccgtcct gcgcgaggag agccggcgtc tcctcgccgc
     2701 gcggggcatc gtcatctatc tgcgcgcgac ccccgagcat ctgttcgagc gcgtgcgcca
     2761 ggaccgcaac cgcccgctgc tcgccaccgg cgacccgctc gagcggctgc gggcgctcta
     2821 ccgcgagcgc gacccgctgt accgcgaggt cgccgacctc gtgatcgaca ccgggcgcca
     2881 gagcgtgcag gtgctggcgc gcgccctcct cgagcagctt ggagcacgat ggaaagcctc
     2941 cgcgtagcgc tcggcagccg ctcctacccg gtgcacatcg gcacgggcct ggccggctcg
     3001 gcgcagctct acgcgccgca ccgcgccggc gggcgcgtcg cggtggtgac caacgcggtg
     3061 gtcgcgccgc tctatctcga agcggtgaag cgcgcgagcg gcgcgagcgt ggagatcgtg
     3121 ctgcccgacg gcgaggcggc gaagagctgg gagacgctga accgggtgtt cgacgcgctg
     3181 ctcgaggcgc gctgcgggcg cgacagcctg atcgtcgcgc tcggcggcgg cgtgatcggc
     3241 gacctggccg gcttcgccgc cgcggtctac cagcgcggcg tg
//
LOCUS       DASSVL010000528         4008 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_534381, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000528 DASSVL010000000
VERSION     DASSVL010000528.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 4008)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4008)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4008
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_534381"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(49..783)
                     /locus_tag="VFM52_09280"
     CDS             complement(49..783)
                     /locus_tag="VFM52_09280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007806884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0008097 - 5S rRNA binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L25/general stress protein
                     Ctc"
                     /protein_id="HET8765399.1"
                     /translation="MAKVHEIKAESRKDEGKGASRRLRRASYVPGVVYGAGKPAENIQ
                     VEHNTILLAAKNEWFFSSLLDLNVDGKVQKVLLRDWQKHPFKQLMMHVDFLRIDENAK
                     LRVNVPLHFLNKELSPAAKTAGVVITHNLNEVEVYCLPKDLPEHIEVDLAELKLGDIV
                     HLSQLKLPADVQLVQLHLGEAHDAAVVTAAMAKVEVEETPAPAEGDAAAAAAAPAAGA
                     AGKDAAAAKGAAAAPAKDAAPAKGKK"
     gene            complement(888..1853)
                     /locus_tag="VFM52_09285"
     CDS             complement(888..1853)
                     /locus_tag="VFM52_09285"
                     /EC_number="2.7.6.1"
                     /inference="COORDINATES: protein motif:HMM:NF003428.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-phosphate diphosphokinase"
                     /protein_id="HET8765400.1"
                     /translation="MDRSDSSPMMLFAGKAHPQLAEDIAHRLGVPLGKALVSTFSDGE
                     VQIEIEENVRRQEVFVIQPTGAPSAKNLVELLALADALKRASAASVTAVMPYFGYARQ
                     DRRPRSTRVPITAKLVAKLISTAGIDRVLTVDLHAEQIQGFFDVPVDNVYASPVLLAD
                     IWRHYSTDDMVVVSPDVGGVVRARAVAKRLDDADLAIIDKRRPRANVATVMNIIGDVA
                     GKTCVMVDDIVDTAGTLCAAAAALKERGAKKVVAYCVHPVLSGPALGNLEKSSLDRLV
                     VTNTLPLRPEAQACAKIRQLSVAELLAETIRRIAYGESVSSLYVD"
     gene            complement(1885..1962)
                     /locus_tag="VFM52_09290"
     tRNA            complement(1885..1962)
                     /locus_tag="VFM52_09290"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1925..1927),aa:Gln,seq:ttg)
     gene            complement(2048..3412)
                     /locus_tag="VFM52_09295"
     CDS             complement(2048..3412)
                     /locus_tag="VFM52_09295"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008213204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HET8765401.1"
                     /translation="MACAIDRAEPAQLDALCAIEREAVQLFRGHPAWPAYAAVAMPRS
                     ELLRALARGLVWVALDAEGTELGFVWLDPVPGEDAVEIAEIDVLPAHGRRGIGAALLE
                     HACAWARAAGYRRVDLGTLGDVPWNAPFYAGHGFGIVDKHAPAFALALARDRENGFPD
                     HLRVFMSRPLAPLAAGDWSVWPAPARLGLGRRAVDGGAAQRAAYCLLDWGDEVRVRVS
                     ADGEVRRAGMPAGETGDLATRAARLLREHAGTGQGVEFAVSRRMARSGGLGVDSSHAA
                     TLLVALNERWGCGLGAGTLEELAGRLGARVPAFLGGFPAWTEEGGNPVALALPRRHYV
                     VLDPGERVSATTVREAAELTPLVPPATISAFISGEAAENAFTAVVRKHHPRVAAALDW
                     LGRQGAARLSGSGGCSFLEVRTLEQAQAIAARCPSAFTAHVATGAAVSPLCETLARHR
                     RKQH"
     gene            complement(3535..>4008)
                     /gene="lolB"
                     /locus_tag="VFM52_09300"
     CDS             complement(3535..>4008)
                     /gene="lolB"
                     /locus_tag="VFM52_09300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007806890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008320 - protein transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein insertase outer membrane protein
                     LolB"
                     /protein_id="HET8765402.1"
                     /translation="HVDHWTLSGRLGVSDSHDGGSGGFTWTQDGDDYQFVFRTPITGR
                     SFELRGGPDGAVLEGLDGGPLHGPDAEALMRRALGWEVPMRDLRAWVLGLRADSGPAE
                     IAFGDNRLPSLLTQDGWSVDYRAWDTARQPPLPTTVFASRPPYKVRLSIENWDLR"
BASE COUNT          615 a         1453 c         1335 g          605 t
ORIGIN      
        1 gcgcaagcct gcacgccccg cgccgcaagc ggcgcggggc ggcgcggctt acttcttgcc
       61 cttggccggg gcggcgtcct tcgccggggc ggcagcggcg cccttcgcgg cggccgcatc
      121 cttgccggcg gcgccagccg ccggtgcggc ggcagcggcc gcggcatcgc cttcggccgg
      181 agccggcgtc tcctcgacct cgaccttcgc catcgccgcg gtgaccacag ccgcgtcgtg
      241 cgcttcgccc aggtgcagct gcaccagctg cacgtcggcc ggcagcttga gctgcgacag
      301 gtgcacgatg tcgccgagct tcagttcggc cagatcgacc tcgatgtgct ccggcagatc
      361 cttcggcagg cagtacacct cgacctcgtt gaggttgtgg gtgatgacca cgccggccgt
      421 cttcgccgcc ggggagagtt ccttgttgag gaagtgcagc ggcacgttga cgcgcagctt
      481 ggcgttctcg tcgatgcgca ggaaatccac gtgcatcatg agctgcttga acgggtgctt
      541 ctgccagtcg cgcagcagca ccttctgcac cttgccgtcg acgttgagat ccagcagcga
      601 ggagaagaac cattcgttct tcgccgccag caggatggtg ttgtgctcca cctggatatt
      661 ctcggccggc ttgcccgcgc catagacgac gcccggcacg tagctcgcgc gacgcaggcg
      721 gcggctcgca cctttcccct cgtccttgcg gctctcggcc ttgatttcgt gaacctttgc
      781 catgttggta ttacctcgaa gttggccacc tcgcggtggc tggatgactt ccccgcgacc
      841 agggaagcct ttgggtcggc gtccggacgg atccgggccc cggttgttca atccacgtac
      901 aacgaactca ccgactcgcc gtaggcgatg cggcggatgg tttccgccaa cagctcggcc
      961 accgagagct ggcggatctt cgcgcacgcc tgcgcctcgg ggcgcagtgg cagggtattg
     1021 gtgacgacca ggcgatccag gctggatttc tccaggttgc cgagcgccgg gccggacagc
     1081 accggatgca cgcagtaggc gacgaccttc ttcgcaccgc gctccttgag cgcagccgcc
     1141 gcggcgcaca gcgtgccggc ggtgtcgacg atgtcgtcca ccatcacgca ggtcttgccg
     1201 gcaacgtcgc cgatgatgtt catcaccgtc gccacattgg cgcgtgggcg gcgcttgtcg
     1261 atgatcgcga ggtcggcatc gtccagccgc ttggcgacgg cgcgcgcacg caccacgccg
     1321 ccgacatcgg ggctgaccac gaccatgtcg tcggtgctgt agtggcgcca gatgtcggcg
     1381 agcagcaccg gtgaggcgta gacgttgtcc accggcacgt cgaagaagcc ctggatctgc
     1441 tcggcgtgca ggtcgacggt gagcacgcgg tcgatgccgg cggtgctgat cagcttggcg
     1501 accagcttgg cggtgatcgg cacgcgcgtc gaacgcgggc ggcgatcctg gcgggcatag
     1561 ccgaagtacg gcatcaccgc ggtgacgctc gccgccgagg cgcgcttgag cgcatcggcc
     1621 agtgccagca gctcgaccag gttcttcgcg ctcggcgcac cggtcggctg gatcacgaac
     1681 acttcctgcc gacggacgtt ttcctcgatc tcgatctgca cttcgccgtc gctgaaggtg
     1741 ctgaccagcg ccttgcccag cggcacgccc agacgatggg cgatgtcctc ggcaagttgc
     1801 ggatgcgcct tgccggcaaa cagcatcatc ggactggaat cagacctgtc cacgctcgca
     1861 ttcctcgaca aactcgtgac tggatggctg gggcggcagg attcgaacct gcgtatgcgg
     1921 gaatcaaaat cccgtgcctt gaccagactt ggcgacgccc catcaatggt tgttcggccc
     1981 cgccccttgg cgacgccggt gccgaccccg tggccggccg caagcgaacc gtccgtgatc
     2041 cgcccgacta atgctgcttc cgacggtggc gcgccaaggt ttcgcacaag ggcgaaaccg
     2101 ccgcgccagt ggccacgtgg gcggtgaacg ccgacggaca acgggccgcg atggcctgtg
     2161 cctgttccag cgtgcgcacc tcgagaaaac tgcaaccgcc actgccggaa agccgtgccg
     2221 ccccttggcg gcccagccag tccagcgccg ccgccacgcg cgggtgatgc ttgcgcacca
     2281 cggcggtgaa ggcattttcc gctgcttcgc ccgaaataaa ggcggaaatt gtcgctggcg
     2341 gcaccagggg tgtcaattcc gccgcctccc gcaccgtcgt cgcggagacc cgttcaccgg
     2401 ggtcgagcac cacataatgc cggcgcggca aggccagcgc gaccgggttc ccgccctcct
     2461 ccgtccacgc cggaaagccg cccaggaacg ccggcacccg ggcgccaagc cggccggcca
     2521 gttcttccag cgtaccggcg ccgaggccgc atccccaccg ctcgttgagg gccaccagca
     2581 aggtggccgc gtgcgaactg tcgaccccca gcccgccgct gcgcgccatg cggcggctca
     2641 cggcgaactc cacgccctgc ccggtgccgg cgtgctcgcg caacagccgc gccgcccggg
     2701 tggcgagatc gccggtttct ccggccggca tgccggcgcg gcgtacctcg ccgtcggcgc
     2761 tcacgcgcac acgcacctcg tcgccccaat cgagcaggca ataggcagcc cgttgcgcag
     2821 caccaccgtc aaccgccctg cgcccgagac cgagccgggc aggcgctggc cagacgctcc
     2881 agtcaccggc ggcaagcggc gccagcggac ggctcatgaa cacgcgcagg tggtcgggaa
     2941 acccgttctc gcggtcacgc gccagcgcca gggcaaacgc cggcgcatgc ttgtcgacga
     3001 tgccaaagcc gtgcccggca tagaacggcg cgttccacgg cacgtcgccc agggtgccga
     3061 gatccacccg ccgataaccg gcggcccggg cccaggcgca ggcgtgttcg agcagcgccg
     3121 caccgatgcc gcgccggcca tgcgccggca gcacgtcgat ttcggcaatc tcgaccgcat
     3181 cttcgcccgg caccgggtcg agccagacga agccgagctc ggtgccctcc gcatccagcg
     3241 ccacccacac caggccgcgc gcaagcgccc gcagcaattc gctgcgcggc atcgcgaccg
     3301 ccgcatacgc gggccacgcc gggtgcccgc gaaacagctg caccgcctcg cgctcgatcg
     3361 cgcacaaggc atcgagctgg gcgggttcgg cgcggtcgat ggcgcaagcc atgagggctc
     3421 acctcgatgg gtggccgttg ccgggctgaa gcttgaccga cgagaacgcc ggcccttgca
     3481 ggtcgggatc catcccgaca tggaactccg ggccgggtcg atgcctgccg cccatcaccg
     3541 caggtcccag ttctcgatcg acagccgcac cttgtacggc gggcgcgacg cgaacaccgt
     3601 ggtgggcagc ggcggctggc gcgcggtgtc ccaggcgcgg taatccacgc tccagccgtc
     3661 ctgggtcagc agcgacggca ggcggttgtc gccgaacgcg atctcggccg ggccgctgtc
     3721 cgcgcgcaag cccagcaccc acgcgcgcag atcgcgcatc ggcacctccc agcccagcgc
     3781 gcgacgcatc agcgcctcgg cgtccgggcc gtgcagcggg ccgccatcca ggccttcaag
     3841 cacggcgccg tccgggccgc cgcgcaactc gaagctgcgc ccggtgatcg gggtgcggaa
     3901 cacgaactgg taatcgtcgc cgtcctgggt ccaggtgaag ccgccactgc cgccatcatg
     3961 gctatcggag acgccgagcc ggccgctcag ggtccagtgg tcgacgtg
//
LOCUS       DASSVL010000529         2044 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_436099, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000529 DASSVL010000000
VERSION     DASSVL010000529.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2044)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2044)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2044
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_436099"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(158..448)
                     /locus_tag="VFM52_09305"
     CDS             complement(158..448)
                     /locus_tag="VFM52_09305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017463933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF493 family protein"
                     /protein_id="HET8765403.1"
                     /translation="MQEIDFTQAKREGKGFRFPGEFEITAVGKAEANLPAKVPELLGG
                     AGLDVLHETVRERASSAGNYVSVTVSFRANTREEYETAHAVLRADEAIRYTM"
     gene            complement(448..1707)
                     /locus_tag="VFM52_09310"
     CDS             complement(448..1707)
                     /locus_tag="VFM52_09310"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008210128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine carboxypeptidase family
                     protein"
                     /protein_id="HET8765404.1"
                     /translation="MSFLHRILTPFAVAALVAGAAFAQAVPPRPSPVPRPVVPAMPVP
                     PPPEVDAQSWVLMDYATGQILASKNPDERRAPASLTKVMTDYVVSAELANGRIHPNDE
                     VTISEHAWRSGGAGTDGSTSFLKLGSQVPLMDLLKGMIVQSGNDAAIALAEHTAGSED
                     AFANLMNAYAKQLGMVNTHYSNASGYPVADHYTTARDVAILSRALIHDFPADYAISAI
                     KEYEWNGIKQQNRNALLWRDPAVDGIKTGHTAAAGFCLDASAKRGDQRMIAVVMGATT
                     DKGRADAAMALLNYGFRYYETHKLYVAGKPLANPRLWKGEANHLPLGVAEDVLVTVKT
                     GQYDKLKATMDIPATLIAPFKKGQQVGMLRITLDGAPIQNVPLVALDAAPQGGFFSRL
                     WDSILLWFHGNKQTATVAAPPAAKAAT"
     gene            complement(1769..>2044)
                     /locus_tag="VFM52_09315"
     CDS             complement(1769..>2044)
                     /locus_tag="VFM52_09315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007082000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SPOR domain-containing protein"
                     /protein_id="HET8765405.1"
                     /translation="EPPPLPPVSQGAKGPGIYLQVGAFADAANAERVAAQLRQANFAP
                     VQVEQVQTNGRTMRRVRLGPLKDVDAADEVTRRIENMGLPRPQVAVD"
BASE COUNT          299 a          675 c          724 g          346 t
ORIGIN      
        1 gccagatcgg caggtacggc cggcgaccga gacgacggat ggccaacggc cgggaatcgg
       61 gagcggggga tgcggaatcg atggtcactg gagtcggggc aagtcctgga gattcgtggc
      121 gaggcggggc gccgttgccg gcgcctgacg gcgtgcgtca catcgtgtag cggatcgcct
      181 cgtcggcgcg cagcacggca tgtgccgtct cgtattcctc gcgggtgttg gcgcggaagc
      241 tgacggtgac cgagacgtag ttgccggcgg atgaagcgcg ctcgcgcacg gtctcgtgca
      301 gcacgtcgag gccggcgccg ccgagcagct cgggcacctt ggccggcagg ttggcttcgg
      361 ccttgccgac ggcggtgatc tcgaattcac cggggaagcg aaagcccttg ccttcgcgct
      421 tggcctgggt gaaatcgatt tcctggatca tgtcgccgcc tttgccgctg gcggcgcggc
      481 aaccgtcgcg gtctgcttgt tgccgtggaa ccacagcagg atcgaatccc acaggcgcga
      541 gaagaagccg ccctgcggcg ccgcatccag cgcgaccagc ggcacgttct ggatcggcgc
      601 accgtccagg gtgatgcgca gcatgcccac ctgctggccc ttcttgaacg gcgcgatcag
      661 cgtcgccgga atatccatcg tggccttgag cttgtcgtac tggccggtct tgaccgtcac
      721 cagcacgtcc tcggccacgc cgagcggcag gtggttggcc tcgcccttcc acaaccgcgg
      781 gttggccagg ggcttgccgg ccacgtagag cttgtgcgtc tcgtagtagc ggaagccgta
      841 gttgagcagc gccatcgccg catcggcgcg gcccttgtcg gtggtcgcgc ccatcaccac
      901 tgcgatcatg cgctggtcgc cgcgcttggc cgaggcgtcg agacagaagc cggcagccgc
      961 ggtgtggccg gtcttgatgc cgtccaccgc ggggtcgcgc cacagcagcg cattgcggtt
     1021 ctgctgcttg atgccgttcc actcgtactc cttgatcgcc gaaatcgcat agtccgcggg
     1081 gaaatcgtga atcagcgcgc gcgacaggat ggcgacgtcg cgcgccgtgg tgtagtggtc
     1141 ggcaaccggg taacccgacg cattggagta atgcgtgttg accatgccga gctgcttggc
     1201 ataggcgttc atcaggttcg cgaacgcgtc ctcggagccg gcggtgtgct cggccagcgc
     1261 gatcgcggcg tcgttgccgg attgcacgat catgcccttg agcaggtcca tcagcggcac
     1321 ctggctgccg agcttcagga agctcgtcga gccgtcggtg ccggcgccac ccgagcgcca
     1381 ggcgtgctcg ctgatggtca cctcgtcgtt cgggtggatg cggccgttcg ccagctcggc
     1441 cgacaccacg tagtcggtca tcaccttggt cagcgacgcc ggcgcgcggc gctcgtccgg
     1501 gttcttcgag gcgaggatct ggccggtggc gtaatccatc agcacccagc tctgcgcatc
     1561 tacctcgggc ggcggcggca ccggcatcgc cggcaccacc gggcgcggta ccggcgacgg
     1621 tcgcggcggc acggcttgcg cgaaggcggc gccagccacc agggcggcaa cggcgaacgg
     1681 ggtcaggatg cggtgcagaa agctcatcgt ggttccggtt ccagtcggtg gcaccgtggg
     1741 caacggcacg gcgccaagtc aaagaaagtc agtctactgc gacctgcgga cgcggcaggc
     1801 ccatgttctc gatgcgccgg gtcacctcgt ccgcggcgtc gacatccttc agcgggccca
     1861 gccgcacgcg gcgcatggtg cgcccgttgg tctgaacctg ctccacctgc accggcgcaa
     1921 agttggcctg gcgcaactgc gccgcgaccc gctcggcgtt tgccgcatcg gcgaaggcgc
     1981 ccacctgcag gtagatgccc ggccccttcg ccccctggct gaccggcggc agcggcggag
     2041 gttc
//
LOCUS       DASSVL010000530         2097 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1311245,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000530 DASSVL010000000
VERSION     DASSVL010000530.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2097)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2097)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2097
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1311245"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..572)
                     /gene="ccsA"
                     /locus_tag="VFM52_09320"
     CDS             complement(<1..572)
                     /gene="ccsA"
                     /locus_tag="VFM52_09320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007510505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis protein CcsA"
                     /protein_id="HET8765406.1"
                     /translation="MSLAVPAIFAIVLYLGSAGLLALRVPWATPGLRRVALAVATLAV
                     VLHAGVLFGAHGGRLDLHFFAALSLVGGVVAALTLLVNVSRPVAGLGVVVFPIAALLL
                     ALDTFLAPPTTPRPLDWQISLHVAIALLGYSLLSIAAAVAVLLAVQERALRTHRPTRL
                     ILALPPLVQTESLLFRLIAAGFLLLTLTLM"
     gene            674..2056
                     /gene="ffh"
                     /locus_tag="VFM52_09325"
     CDS             674..2056
                     /gene="ffh"
                     /locus_tag="VFM52_09325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008434444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0048501 - signal recognition particle,
                     plasma membrane targeting [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005048 - signal sequence binding
                     [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle protein"
                     /protein_id="HET8765407.1"
                     /translation="MFESLSQRLSATVNRLRGRGRLTEENIREALREVRIALLEADVA
                     LPVVQALIQRVKVRAVGQDVMKSLSPGQALVKVVSDELTTVMGTANSELNLAATPPAV
                     VLMAGLQGAGKTTTVAKLARLLTERRKKKVMVVSCDVYRPAAIEQLRTLAEQVGVKFF
                     PSSADQSPVDIARDAIAAARREVIDVLLVDTAGRLHVDAAMMAEIKALHAAITPVETL
                     FVVDSMTGQDAATTAKAFADALPLTGVVLTKTDGDARGGAALSVRYVTGRPIKFLGAG
                     EKTDALEPFHPDRIAQRILGMGDVLSLVEEVERKVDQEKAQKLAQKVMKGKRFDLNDM
                     RDQLEQMNNMGGLAGLMDKLPGVSGLPDSVKSKINDNEIKHMVAIIQSMTAKERRHPD
                     LLNGSRRARVARGSGTQPADVNRLLKQYMQMEKMMSKLSKGGTKGLLRQMRGAMKGMG
                     GMGGGFPPMR"
BASE COUNT          387 a          688 c          753 g          269 t
ORIGIN      
        1 ctcatcagcg tcagcgtgag cagcaggaag ccggcggcga tcagccggaa cagcagcgac
       61 tcggtctgca ccagcggcgg cagcgccagt atcagccgtg tcggccggtg ggtgcgcagc
      121 gcgcgctcct gcaccgccag cagcacggcg acggcagcgg cgatcgacag caggctgtag
      181 ccgagcaggg cgatggcgac atgcaggctg atctgccagt cgagcgggcg cggcgtcgtc
      241 ggcggcgcga ggaaggtgtc cagcgccagc agcagcgccg cgatcgggaa cacgaccacg
      301 cccagcccgg cgacggggcg cgacacgttc accagcaacg tcagcgcggc aaccacgccg
      361 ccgaccagcg acagcgcggc gaagaagtgc agatcgaggc gccccccgtg cgcgccgaac
      421 agcacgccag cgtgcaggac cacggccagc gtggcgaccg ccagcgcgac gcgacgcagg
      481 ccgggtgtgg cccatggcac gcgcagcgcc agcaggccgg cgctgccgag gtacagcacg
      541 atggcgaaga tggcgggcac ggcaagcgac atggtcggag agtttcgcac agcgcccccg
      601 gcgcgtgcag cgccgaggtc gatgatggcg cgtccggtat actcggcggt tccgcacgat
      661 tgatcctgcc gccatgttcg aatcgctcag ccaacgcctg tccgccaccg tcaaccgcct
      721 gcgcggtcgc ggccggttga ccgaggaaaa catccgcgag gcgctgcgcg aggtgcgtat
      781 cgcgttgctg gaagccgacg tggcgctgcc ggtggtacag gcgctgatcc agcgcgtgaa
      841 ggtgcgcgcg gtcggccagg atgtgatgaa gagcctgtcg cccggccagg cgctggtgaa
      901 ggtcgtgagc gacgagctga ccacggtgat gggcaccgcg aacagcgaat tgaacctcgc
      961 cgcgacgccg cccgccgtgg tgctgatggc gggcctgcag ggcgccggca agaccaccac
     1021 ggtggcgaaa ctcgcacgcc tgctgaccga acggcgcaag aaaaaggtga tggtggtgag
     1081 ctgcgacgtc taccgtccgg ccgccatcga gcagttgcgc acgctggccg aacaggtcgg
     1141 cgtgaagttc ttcccctcgt cggccgatca gagcccggtc gacattgccc gggacgcgat
     1201 cgctgcggcc cgtcgcgaag tgatcgacgt gctgctggtc gacaccgccg gccggctgca
     1261 cgtggacgca gcgatgatgg ccgagatcaa ggcgctgcat gccgcgatca cgccggtcga
     1321 aacgctgttc gtggtcgact cgatgaccgg ccaggacgcc gccaccacgg ccaaggcgtt
     1381 tgccgatgcg ctgccgctca ccggcgtggt gctgaccaag accgacggcg acgcccgcgg
     1441 tggtgcggcg ctgtcggtgc gctacgtcac cggtcggccg atcaagttcc tcggcgccgg
     1501 cgagaagacc gacgcgctcg agccgttcca ccccgatcgc atcgcccagc gcatcctcgg
     1561 catgggcgac gtgctctcgc tggtcgagga ggtcgagcgc aaggtcgacc aggaaaaggc
     1621 gcagaagctc gcccagaagg tgatgaaggg caagcgcttc gacctgaacg acatgcgcga
     1681 ccagctcgaa cagatgaaca acatgggcgg actggccggc ctgatggaca aactgcccgg
     1741 tgtctccggg ctgccggaca gcgtgaagtc gaagatcaac gacaacgaaa tcaagcatat
     1801 ggtggcgatc attcaatcga tgaccgcgaa ggagcggcgc caccccgacc tgctgaatgg
     1861 ctcgcgccgc gcccgcgtcg cgcgtggctc cggtacccag ccagcggacg tgaaccgcct
     1921 gctcaagcag tacatgcaga tggaaaagat gatgtccaag ctctccaagg gcggcaccaa
     1981 gggcctgctg cggcagatgc gcggtgccat gaagggcatg ggcgggatgg gcggcggctt
     2041 tccgccgatg cgctgaccgg agcattcggg gccgccggga gcggcggttc ctcggat
//
LOCUS       DASSVL010000531         3038 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_887884, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000531 DASSVL010000000
VERSION     DASSVL010000531.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3038)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3038)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3038
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_887884"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1779
                     /locus_tag="VFM52_09330"
     CDS             <1..1779
                     /locus_tag="VFM52_09330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017462597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-synthetase adenylyltransferase"
                     /protein_id="HET8765408.1"
                     /translation="GHIPAARAKVLREAYVFLRRLENRLQMLRDAQTHDVPDDALSRE
                     RIALGLGWPGWEPLAETLAHHRGIVADEFAEALMPHGGRAACAPAADTALWQAACDES
                     LDAGTLAASGFVPADAAADALGKLPLAGAVRGMSARSRERLDHLMPQLVAAARASAAP
                     VACLVRLCRLVQAVARRSSYLALLEEQPAARRRLAAVFAGSGLLAEQVIAQPLLLDDV
                     LDPRIDQLPLRRADIAAEITRVLGTLDERDAETELERITEFRSSTAFRLGLAFNDGRA
                     DAAATARRLAALAESVVGAVTQLAERELAAQHGRLPGDGLGFAVLGYGSLGGQELGFA
                     SDLDLVFVYDGERARATSDGARPIEGVRWYQRLAQRVMNWLTVSTRAGHLYEVDTRLR
                     PDGSKGLLVSSFEAFVAYQQSRAWTWEHQALLRARPVAGDAVLGARLTEVRRTILGAP
                     RDRARVLAEVSQMRRRWRAERDRSDAINLDLKQGLGTLLDIAFAVQGLVLAHAAQHPA
                     LLASTANAGLLQACREARLLSAAQADTLAGAHAVLLQRALRCTLDGRSRVAPRDAELT
                     ALAAGVNAVAEELGFRFGAPPAGEDA"
     gene            1953..>3038
                     /locus_tag="VFM52_09335"
     CDS             1953..>3038
                     /locus_tag="VFM52_09335"
                     /inference="COORDINATES: protein motif:HMM:NF019135.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component regulator propeller
                     domain-containing protein"
                     /protein_id="HET8765409.1"
                     /translation="MLALLAFAALLAATPPVPNRAPAAPPSRSASAAPPSLLPTPQFV
                     HFDMADGLPSSSINAVAQDRHGFMWFGGSGGLSRYDGVEFHTYKHQPGKAASLSSNDI
                     TQLVCAGDGRLWISTGDSGLDRLDPATGRFEHWRHDPANPDSLTSDVVVALALDHDGS
                     LWVGTRKGLDRVSADGKHVTRVPFLKQVGYVSDNPRDEIVGALNVDADGTLWIGTWSG
                     LLFKRHPDGRYERVTVQWPKVSPMNQIWRINGSGKDLRIGTRVGLFLLGADGIARPAY
                     RPDQVPASYVFDTARDRRGRLWMATLDGVVMDDPATGIHQFQSQPLLLGGLPGKWTWR
                     VIRDREGGLWFAFYDGGVGYLAPGWENF"
BASE COUNT          381 a         1061 c         1135 g          461 t
ORIGIN      
        1 gggcacatcc cggcggcacg cgccaaggtg ctgcgcgagg cctacgtgtt cctgcgccgg
       61 ctggagaacc gcctgcagat gctgcgcgac gcgcagaccc acgacgtccc cgacgacgcg
      121 ctgagccgcg agcgcatcgc gctcgggctc ggctggcccg gatgggagcc gctggcggaa
      181 accctggcac atcatcgcgg gatcgttgcc gatgaatttg ccgaggcgct gatgccgcac
      241 ggcggtcgcg ccgcctgcgc gccggcggcc gacaccgcgt tgtggcaggc cgcctgcgac
      301 gagtcgctgg atgccggcac gctcgcagcc agcggcttcg tgcctgccga tgcggccgcc
      361 gatgcgcttg gcaagttgcc gcttgccggc gccgtgcgcg gcatgtcggc gcgttcgcgc
      421 gagcggctcg accacctgat gccgcagctg gtcgccgcgg cgcgcgccag cgcggcgccg
      481 gtggcgtgcc tggtgcgcct gtgccggctg gtgcaggcgg tggcgcggcg ctcctcctat
      541 ctggccttgc tggaggaaca gcccgcggca cgcaggcgac tggccgccgt gtttgccggc
      601 agcggcctgc ttgccgagca ggtgatcgcg cagccgctgc tgctggacga cgtgctcgat
      661 ccgcgcatcg accagctgcc gctgcgccgc gccgacatcg ccgccgagat cacccgcgtg
      721 ctcggcacgc tggatgagcg cgacgccgag accgagctgg agcggatcac cgagttccgc
      781 tcgtccaccg cgttccggct ggggctggcc ttcaacgacg gccgcgccga tgccgcggcc
      841 accgcgcgcc ggctggccgc gctggccgag tcggtggtgg gcgcggtaac ccagctcgcc
      901 gaacgcgagc tggccgcgca gcacggccgc ctgccggggg acggcctggg ttttgcggtg
      961 ctcggctacg gcagcctcgg cggccaggag ctgggcttcg cctccgacct cgacctggtg
     1021 ttcgtctacg acggcgagcg ggcgcgcgcg acgagcgatg gcgcgcggcc gatcgagggc
     1081 gtgcgctggt accagcgcct cgcgcagcgg gtgatgaact ggctcaccgt gtccacccgc
     1141 gccgggcact tgtacgaggt ggatacgcgg ctgcgcccgg atggttccaa gggcctgctg
     1201 gtgagcagtt tcgaggcgtt cgtggcctac cagcagagcc gggcatggac gtgggagcac
     1261 caggccttgc tgcgtgcgcg cccggtggcc ggcgacgcgg tgctgggcgc acggctgacc
     1321 gaggtgcggc gcacgatcct cggcgcgccg cgcgaccgcg cacgggtgct ggccgaagtc
     1381 agccagatgc gccgccgctg gcgcgcggag cgcgatcgct ccgacgcgat caacctggac
     1441 ttgaagcagg gcctgggcac cctgctcgac atcgcgttcg cggtgcaggg cctggtgctc
     1501 gcgcatgcgg cgcagcatcc ggcgctgctg gcgtcgaccg cgaacgccgg cttgctgcag
     1561 gcatgtcgcg aggcccgcct gttgagtgct gcgcaggcgg atacgctggc cggcgcccac
     1621 gccgtgctgt tgcaacgcgc gttgcgctgc acgctcgatg gccgctcgcg cgtcgcgccg
     1681 cgggacgccg aactcaccgc gttggcggcc ggggtgaatg cggtggcgga ggaactcggc
     1741 ttccgcttcg gcgcgccgcc cgccggcgag gacgcctagc gtccggtcgg catcgcgcct
     1801 gcggcacgac gtgcgcgtgc attccgccgg ctgcgccgtt ccgggcgagc cgcaaggccg
     1861 caaggccccc gctgccggat gcgggctgtt tgcgcgcgct cgcgcgtgcg ggtgacattt
     1921 ggcatgatgc ggtgggttca tgggggatcc acatgcttgc cttgctcgcg ttcgcggcgc
     1981 tgctggcggc gacgccgcca gtgccgaaca gggcgccggc agcgccgcct tcgcgcagcg
     2041 cgtcggccgc tccgccaagc ctgctgccca cgccgcagtt cgtccatttc gacatggccg
     2101 acggcctgcc cagctcgtcg atcaacgcgg tggcgcagga ccggcacggt ttcatgtggt
     2161 tcggtggctc gggcgggttg tcgcgctacg acggcgtcga gttccacacc tacaagcacc
     2221 agccgggcaa ggccgcctcg ttgtcgtcga acgacatcac ccagctggtc tgcgccgggg
     2281 acggccggct gtggatttcc actggcgaca gtggcctcga ccggctggat ccggcgaccg
     2341 gcaggttcga gcactggcgc cacgatccgg ccaacccgga cagcctgacc agcgacgtgg
     2401 tggtggcgct cgccctcgat cacgacggca gcctgtgggt gggcacgcgc aaggggctcg
     2461 accgggtgtc ggccgatggc aagcacgtca cccgcgtgcc gttcctcaag caggtcggct
     2521 acgtcagcga caatccgcgc gacgaaatag tgggcgcgct gaacgtcgac gccgacggca
     2581 cgctgtggat cggcacctgg tccggcctgc tgttcaagcg ccatcccgat ggccgctatg
     2641 aacgcgtcac cgtgcagtgg ccgaaggtct cgccgatgaa ccagatctgg cggatcaacg
     2701 gcagcggcaa ggatctgcgc atcggcaccc gcgtcggcct gttcctgctt ggcgccgacg
     2761 gcatcgcgcg cccggcgtac cgcccggacc aggtgccggc cagctacgtg ttcgacaccg
     2821 cgcgcgatcg gcgtgggcgg ttgtggatgg ccacgctgga tggcgtggtg atggacgacc
     2881 cggccaccgg tatccaccag ttccagagcc agccgctgtt gctcggcggg ctgccgggca
     2941 agtggacctg gcgcgtcatc cgcgatcgcg agggcggctt gtggtttgcg ttctatgacg
     3001 ggggcgtcgg ttacctcgcg ccaggctggg agaatttc
//
LOCUS       DASSVL010000532         2773 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1156472,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000532 DASSVL010000000
VERSION     DASSVL010000532.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2773)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2773)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2773
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1156472"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..251
                     /locus_tag="VFM52_09340"
     CDS             <1..251
                     /locus_tag="VFM52_09340"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HET8765410.1"
                     /translation="VIVALSAQFGGAMLLESSLSFLGIGIQPPGASWGNMISDNLLTW
                     RYQPHLLAIPGIVLTLVVLAFNFLGDGLNDALNPRARR"
     gene            complement(248..436)
                     /locus_tag="VFM52_09345"
     CDS             complement(248..436)
                     /locus_tag="VFM52_09345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8765411.1"
                     /translation="MPLETYLAQNAQRPETRRLPEEQIRAQRQFLDNLLPRLAEEGWD
                     QVIVLNEQRRGVPIELSG"
     gene            complement(604..1302)
                     /locus_tag="VFM52_09350"
     CDS             complement(604..1302)
                     /locus_tag="VFM52_09350"
                     /inference="COORDINATES: protein motif:HMM:NF033545.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HET8765412.1"
                     /translation="MRDLGCRAGRGGERLGAAARARPRHDHAQKKSLIATERDEVARA
                     AWREAVGALDPADLIFLDETATHIAMTPRYARAPRGVRVHATVPRNDGQTTTLLAALS
                     GAGVGPAMTLDGAADGPAFVAYVRAFLAPTLRPGQVVILDNLSVHKVAAARALVEARG
                     CQLLFLPAYSPDLNPIELAFAKLKEALRRAEARTRAALEAALAAALAAITASDAHGWF
                     AACGYPLQEAQPLC"
     gene            complement(1203..1703)
                     /locus_tag="VFM52_09355"
     CDS             complement(1203..1703)
                     /locus_tag="VFM52_09355"
                     /inference="COORDINATES: protein motif:HMM:NF013842.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 transposase-related protein"
                     /protein_id="HET8765413.1"
                     /translation="MLKMLKNPWWGGMGCRATKVAAEGAAAPQSPAYAGLEWLAKRLR
                     WWYRGVMKAYSTDLRQRVVEAVAVGMPRPEVARVFQVSVATIKRYLKQRHERGDLRPG
                     HSPGRTPVIAPAQYPALAAQVAAHPDATLAQHCAIWAAEQGAAVSVWALQRALDRATI
                     TRKKSR"
     gene            1860..>2773
                     /locus_tag="VFM52_09360"
     CDS             1860..>2773
                     /locus_tag="VFM52_09360"
                     /inference="COORDINATES: protein motif:HMM:NF012407.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate/isopropylmalate dehydrogenase family
                     protein"
                     /protein_id="HET8765414.1"
                     /translation="MAYTVTLMPGDGIGPEVVEATRRVLEATGIKFEWDYQDLGLSAQ
                     EKHGTPLPDATIASVRRTKLGLKGPTTTPIGTGTRSVNVGLRQALNLYANLRPAKTYP
                     GVRAPFDNVDLIVVRENLEDLYAGVEFDTGTDEARMVIDAINSQSAKKVAADAAISIK
                     MITPEGSRRIVKFAFDYARQNKRHLVTAVHKANIMKYTDGLFLHVAQEVAQEYPDIEF
                     NDRIVDNMCMQLVQKPDLYDVLVLPNLYGDIVSDLCSGMIGGLGVAPGANIGTEAALF
                     EPTHGSAPKYAGLNKVNPTALLLSGVMML"
BASE COUNT          463 a          926 c          916 g          468 t
ORIGIN      
        1 cagtcattgt cgcgctctcg gcgcaattcg gcggcgcgat gctgctggaa tcgtcgctga
       61 gttttctggg tatcggtatt cagccgcccg gcgccagctg gggcaatatg atcagcgaca
      121 acctgctcac ctggcgctac cagccgcacc tgctcgccat ccccggcatt gtgctgacgc
      181 tggtcgtgct ggccttcaac ttcctgggcg acggcctcaa cgacgcgctg aacccacggg
      241 cgcggcgtta gcctgacagt tcgatcggca cgccgcgccg ttgctcattc agcacgatga
      301 cctgatccca accttcttcg gcgaggcgcg gcagcaggtt gtcaagaaac tggcgctgcg
      361 cgcgaatctg ctcttctggt aggcgtcgcg tttcgggacg ttgcgcgttt tgcgccaggt
      421 aggtttcgag cggcaaatcg aaaacgacaa gcgcgctgta atattcatgc gtccgcgcgt
      481 ggccgagcag acctcttcgc agttcagggg atcgtttggc gaacgcgtcc tctctcctgc
      541 gtctgggccg ttgaccccgc tcactctggg ggcgagttcg ccgtccgcgg ccgcttagag
      601 cggttagcat aaaggttgcg cttcctggag cgggtagccg caggcggcga accagccgtg
      661 tgcatcgctg gcggtgatag cggcgagggc cgcagcgagg gcggcctcca gcgccgctct
      721 cgtgcgcgcc tcggcgcggc gcagcgcctc cttcagtttg gcgaaagcca gttcgatcgg
      781 attgaggtcc ggggagtagg caggcaggaa cagcagttgg caaccgcgcg cctccacgag
      841 cgcccgtgcc gcggccacct tgtggacgct caggttgtcc aggatgacga cctgccctgg
      901 gcgcagcgtc ggggctaaga atgcgcgcac gtaggcgacg aacgccgggc cgtcggcggc
      961 accgtccaag gtcatggctg gtcccacccc agccccgctc agcgcggcga gcagcgtggt
     1021 ggtctgacca tcgttgcgcg gcaccgtggc gtggacccgc acgccacgtg gcgcgcgggc
     1081 gtagcgcggg gtcatggcaa tatgagtggc cgtctcgtcg aggaaaatga ggtcggccgg
     1141 gtcgagcgcg ccgaccgcct cccgccaggc cgcccgcgct acctcgtcgc gctcggtggc
     1201 gatcagcgac tttttttgcg cgtgatcgtg gcgcggtcga gcgcgcgctg cagcgcccag
     1261 acgctcaccg ccgcgccctg ctcggcagcc cagatcgcgc agtgctgcgc gagggtcgcg
     1321 tccgggtgcg ccgccacctg cgccgccagc gccggatact gcgccggggc gatcaccggc
     1381 gtgcgcccgg gggagtggcc ggggcggagg tcgccgcgct cgtgccgctg cttgaggtag
     1441 cgtttgatcg tcgccaccga gacctggaag acgcgggcga cctccgggcg cggcatcccc
     1501 acagcgaccg cctcgactac ccgctgacga agatctgttg agtaggcttt catgacacca
     1561 cgataccacc agcgcaacct tttcgctagc cactctagtc cggcgtaggc cggactttga
     1621 ggcgccgcag caccttcagc cgcgacttta gtcgcccggc aacccatacc cccccaccag
     1681 gggtttttga gcattttgag cattttgtgc agagggtgca gaaccgtccc ctcatcactc
     1741 gcggcgcccg tcccactttc gcgccacttc ccctacaatg tgagccgcgt ggctgtgcgc
     1801 gaccacccag ctgcgggctg gcgcgacagg gcggcgcgaa tgagggagga ggcacgcaca
     1861 tggcctacac cgtgacgttg atgcccggcg atggaattgg cccagaggtt gttgaagcga
     1921 cccggcgcgt gctggaagcg accggcatca agttcgagtg ggattaccag gatctcgggt
     1981 tgagcgcgca ggagaagcac ggcacgccgc tgccggatgc gaccatcgcg tcggtgcggc
     2041 gcaccaaact cggcctcaaa gggccaacga cgacgccgat cggcacgggc acgcgctcgg
     2101 tcaacgtggg cctgcgccag gcgctcaacc tctacgccaa cctgcgcccg gcgaagacct
     2161 accccggcgt gcgcgcgccg ttcgacaacg ttgatctcat cgtcgtgcgc gaaaatctgg
     2221 aagacctcta tgccggcgtc gagttcgata ccggcaccga cgaagccagg atggtgattg
     2281 acgcaatcaa ctcgcagagc gcgaagaagg tcgcggcgga cgcggccatc agcatcaaga
     2341 tgatcacgcc ggaaggcagc cggcgcatcg tcaagttcgc gttcgactac gcgcggcaga
     2401 acaagcgcca tctggtgacg gccgtccaca aggccaacat catgaagtac accgacggcc
     2461 tcttcctgca cgtcgcgcag gaagtcgccc aggaatatcc cgacatcgag ttcaacgacc
     2521 gcatcgtgga caacatgtgt atgcagctgg tgcagaagcc ggacctctac gatgtgctgg
     2581 tgctgccgaa cctctatggc gacatcgtgt cggacctctg ctctggcatg atcggcggtc
     2641 tcggcgtcgc gccgggcgcc aacatcggca ccgaggcggc gctcttcgag cccacccacg
     2701 gctccgcgcc gaagtacgcc gggctcaaca aggtgaatcc caccgcgctg ctcctgtcgg
     2761 gcgtgatgat gct
//
LOCUS       DASSVL010000533         3303 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1396566,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000533 DASSVL010000000
VERSION     DASSVL010000533.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3303)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3303)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3303
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1396566"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1341)
                     /locus_tag="VFM52_09365"
     CDS             complement(<1..1341)
                     /locus_tag="VFM52_09365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007806475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pitrilysin family protein"
                     /protein_id="HET8765415.1"
                     /translation="MKTNSTLKTLALGLGLALAGAAQAATAPLPRDLPAYGPDKPLPT
                     PQIVRRTLPNGLTVWVVPRDGLPKVNVSLAVLGGTAADPAATPALSKLMAGLLNEGTA
                     SRSSRDIAEALQAIGGDYRASSNDDAIRISASALAPHAPQLLALMADTTLHPTFPANE
                     VTLAKANAMQALKVQQAEPDWQAGRAFNHAAFGDHPYARDTMTEATVNAATPETLRAL
                     HDERFRPDRALLVITGRIGADKAMQLAEQQFGAWKAHGKAIPATPPSRLDVAPQRLLV
                     AREGAVQSNIRYGRPSVPASNPDYVPLVLANEILGGGFTSRIMHDIREDKGYSYSPYS
                     NYSAGRVGGATLATVDVRNEVTGATLKELERLYDSMATQPATAEELSGAKRLVGGIYL
                     LRNQIQGMLTATLVSNWVNGLPADFLNTYVAQANKVTAGEVQAMGRKYFAPKDQS"
     gene            complement(1350..2741)
                     /locus_tag="VFM52_09370"
     CDS             complement(1350..2741)
                     /locus_tag="VFM52_09370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007806477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pitrilysin family protein"
                     /protein_id="HET8765416.1"
                     /translation="MRITSLIALIVGSGLALAAHAADTGTWNVPVAVKTLGNGLTVVV
                     SEDHSSPTVGISMVYHVGMRLEPQNRTGFAHLFEHLMFEGTPDAPKGVLMRVIEGGGG
                     VLNGSTRADYTNYIASAPSSALAPILWLEADRMKSLDFSKKNLANQQDVVKEEIRVNV
                     KNQPYGLFFWTDLNRLAFDKWANNHDGYGSFKDLDHASITDVKAFHDTYYQPANAVLG
                     IAGDVTPEQAFALAEKYFGEIPSRALPPRRDVSESLNTKARFEEQTDALAKVPALAIG
                     WKMPARGSTDQVPMMVLSQLLVGDDASRFYQGLVKGRELLLNIQGGVNFPLGDGSDYA
                     GPALLGLFALYKPNATPQQVLTAIDEEIGKVTTSGVDAATLARVKTKMLSDWYGGLEF
                     FMNRADTLAKLQTLWGDANVANQMPGWIEAVTAADLQRVARTYLTDANRSVIVRRPAA
                     AVAAPAPAAKAAK"
     gene            complement(2836..>3303)
                     /locus_tag="VFM52_09375"
     CDS             complement(2836..>3303)
                     /locus_tag="VFM52_09375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008210874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin/lipoate A/B protein ligase family
                     protein"
                     /protein_id="HET8765417.1"
                     /translation="GSLVEGLSFQDSYAFLDDWVLAALHELGIKAWYQPLNDITSEGG
                     KIAGAAQTRRKGALLHHVTMAYDIDAAKMLDVLRIGREKLSDKGTASAAKRVDPLRSQ
                     TGLPRETVVERMLATFRRLHGLTDDTLREGEIARAQTLVKEKFGTPGWIADVP"
BASE COUNT          457 a         1060 c         1199 g          587 t
ORIGIN      
        1 gctctggtcc ttgggggcga agtacttgcg acccatcgcc tgcacctcgc cggcggtgac
       61 cttgttggcc tgcgccacgt aggtgttcag gaaatccgcg ggcaggccat tcacccagtt
      121 ggagacgagc gtggcggtca acatgccctg gatctggttg cgcagcaggt agataccgcc
      181 gaccagccgc ttggcgccgg acagctcctc cgccgtggca ggctgggtgg ccatgctgtc
      241 gtacaggcgc tccagctcct tcagggtggc gccggtcact tcgttgcgca cgtcgacggt
      301 ggccagcgtc gccccgccca cgcgtccggc gctgtagttc gaatagggac tgtaggagta
      361 gcccttgtcc tcgcggatgt cgtgcatgat gcggctggtg aagccgccgc cgaggatttc
      421 gttggcgagc accagcggca cgtagtcggg gttgctggcc gggaccgacg ggcggccata
      481 gcggatattg ctttgcacgg cgccttcgcg tgcgaccagc aggcgctgcg gcgccacgtc
      541 gagcctgctt ggcggtgtgg cggggatcgc cttgccgtgc gccttccacg cgccgaactg
      601 ctgctcggcc agttgcatgg ccttgtccgc accgatgcgg ccggtgatca ccagcaaggc
      661 acggtccggg cggaagcgct cgtcgtgcag cgcgcgcaac gtttccggcg tggccgcatt
      721 caccgtggcc tcggtcatcg tgtcgcgtgc gtaggggtgg tcgccgaatg cggcgtggtt
      781 gaacgcgcgc ccggcctgcc agtcgggttc ggcctgctgc accttgagtg cctgcatcgc
      841 gttggccttg gccagcgtga cttcgttggc gggaaaggtc gggtgcaagg tggtgtccgc
      901 catcaaggcg agcagttgcg gcgcatgcgg ggccagcgcg ctggcgctga tgcggatcgc
      961 atcgtcattg ctgctggcgc ggtagtcgcc gccgatggcc tgcagcgcct cggcgatgtc
     1021 gcgcgagctg cggctggccg tgccttcgtt gagcagacca gccatcagct tggacagggc
     1081 cggcgtggca gccgggtcgg cggcggtgcc gccaagcacc gccagcgaca cgttcacctt
     1141 gggcaggccg tcgcgcggca ccacccagac cgtcagcccg ttgggcaggg tgcggcgaac
     1201 gatctgcggc gtgggcagcg gcttgtccgg gccgtacgcc ggcagatccc tgggcagcgg
     1261 cgcggtggcc gcctgggcgg cgccggccag ggccaggccg agcccgaggg cgagcgtctt
     1321 gagcgtcgag ttcgtcttca tggcgatcct cacttggcgg ccttggcggc gggggcgggc
     1381 gccgcgacag ctgcggccgg gcgacgcacg atcacgctgc ggttggcgtc ggtgagatag
     1441 gtgcgggcca cccgctgcag gtcggcggcg gtcaccgcct cgatccagcc gggcatctgg
     1501 ttggccacgt tggcatcacc ccacagggtc tgcagcttgg ccagcgtgtc ggcgcgattc
     1561 atgaagaatt cgaggccgcc gtaccagtcg gacagcatct tggtcttgac ccgcgccagg
     1621 gtggcggcgt ccacgcccga cgtggtgacc ttgccgatct cctcgtcgat ggccgtcagc
     1681 acctgctgcg gcgtggcgtt cggcttgtac aacgcgaaca ggccgagcaa ggccgggccg
     1741 gcatagtcgc tgccgtcgcc gagcgggaag ttcacgccgc cctggatgtt gagcagcagc
     1801 tcgcgaccct tgaccaggcc ctggtagaaa cgcgatgcgt cgtcgccgac cagcaactgc
     1861 gacagcacca tcatcggtac ctggtccgtg ctgccgcgcg cgggcatctt ccagccgatc
     1921 gccagcgccg gcaccttggc cagcgcgtcg gtctgttcct cgaagcgcgc cttggtgttc
     1981 aacgactcgc tgacatcccg ccgcggcggc agcgcgcgcg agggaatctc gccgaaatac
     2041 ttttcggcca gcgcaaacgc ctgctccggg gtgacgtcgc cggcgatgcc aagcaccgcg
     2101 ttggccggct ggtagtaggt gtcgtggaac gccttcacgt cggtgatgct ggcgtggtcc
     2161 aggtccttga acgagccgta gccgtcgtgg ttgttggccc acttgtcgaa cgcgagacgg
     2221 ttgaggtcgg tccagaagaa caggccgtac ggctggttct tcacgttgac gcggatttcc
     2281 tccttcacca cgtcctgctg gttggccagg ttctttttgc tgaagtcgag cgacttcatg
     2341 cgatcggcct cgagccacag gatgggggcg agcgcggacg acggcgcgga ggcgatgtag
     2401 ttggtgtagt cggcgcgggt ggagccgttc agcacgccgc cgccgccttc gatgacccgc
     2461 atgagcacgc ccttgggcgc gtccggcgtg ccttcgaaca tcaggtgctc gaacagatgg
     2521 gcgaagccgg tgcggttctg cggctccagc cgcatgccga cgtggtagac catgctgatg
     2581 ccgacggtgg gcgagctgtg gtcctcggaa accaccacgg tgaggccgtt gcccagggtc
     2641 ttgacggcca ccggcacgtt ccaggtgccg gtgtcggccg catgcgcggc cagagcgagc
     2701 cccgatccga cgatcagggc gatgaggctc gtgatgcgca tcggtctctc cgtgttgccg
     2761 cgaagggagc ccgaccatgg catgggggcg gagcgcgcga caagtgcccc gcgaccggca
     2821 agcagtgcgc cggcttcagg gcacgtcggc gatccacccc ggcgtgccga atttctcctt
     2881 taccagtgtc tgcgcgcggg cgatttcgcc ttcgcgcagg gtgtcgtcgg tgagtccgtg
     2941 caggcggcgg aaggtggcca gcatgcgttc gaccacggtt tcacgcggca gcccggtctg
     3001 gctgcgcagc gggtcgacgc gcttggcggc gctggcagtg cccttgtcgg agagtttttc
     3061 gcggccgatg cgcagcacgt cgagcatctt ggcggcgtcg atatcgtagg ccatggtcac
     3121 atggtgcagc agcgcgccct tgcgccgggt ctgcgcggcg ccggcgatct tgccgccctc
     3181 ggaggtgatg tcgttgagcg gctggtacca cgccttgatc ccgagttcgt gcagagcggc
     3241 cagcacccag tcgtccagga aggcatagga gtcctggaag gaaagcccct cgacgaggga
     3301 gcc
//
LOCUS       DASSVL010000534         2613 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1057564,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000534 DASSVL010000000
VERSION     DASSVL010000534.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2613)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2613)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2613
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1057564"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..444)
                     /locus_tag="VFM52_09380"
     CDS             complement(<1..444)
                     /locus_tag="VFM52_09380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017463281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8765418.1"
                     /translation="MAKLKLDEAPAAGLPLRFLLSMPCWAVAGGCLLLVDADAALRSR
                     WQPATLALVHVWTLGVLGNAMFGSLLQFLPVAGSTSVRWPRSAPWLHAALNLGVIALV
                     AGLQTGAGGLLMAAGVLLPLAFAWLAAMVGPGLVASAGDRLLRAGI"
     gene            complement(425..667)
                     /locus_tag="VFM52_09385"
     CDS             complement(425..667)
                     /locus_tag="VFM52_09385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007807779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2249 domain-containing protein"
                     /protein_id="HET8765419.1"
                     /translation="MTCDELDLRRLAAPEPMVRALEAADRLAPGEAVAVLTPMLPRPL
                     LMELAAMGFEAEPDAAAADGSVRVVIRRPVDGEAQA"
     gene            complement(825..2054)
                     /locus_tag="VFM52_09390"
     CDS             complement(825..2054)
                     /locus_tag="VFM52_09390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007080890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alginate export family protein"
                     /protein_id="HET8765420.1"
                     /translation="MSNRFRPLAAACLAALAFAATPSVHAATTTDADAAASPWLVDWN
                     VRIRHEQVDSDAFARDAKADTARLRLGLRLQLDNGLRAYLQGNGVAAAGDDYNSGANG
                     RTRYPVIADPQTAEVSQAWLGWQGSTLGVAVGRQALVFDNQRWVNDAAWRQHPQTFDA
                     VSAVWQPASDWTVRYAWLDRVHRAATHKALSPLARERRLDTHLVNVKYTHARQAWVGY
                     SYLNKDRDVPTASSATWGARWTGKPAGDGFGWQLEAARQTDYANNPLRFTHNYWLIEP
                     AWTLSGVTARLGWEHLGGDGHTALQTPLTSPHVFNGWDNQFTSTPAGGLNDRYVALGG
                     KLPAAAELAWNVAWHDFHAVRGGRYGSEWDASVGRPLGRGVTALAKVARYQADGFGRD
                     DTKFWLQLEWSGTQALD"
     gene            complement(2242..>2613)
                     /locus_tag="VFM52_09395"
     CDS             complement(2242..>2613)
                     /locus_tag="VFM52_09395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007512548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SCO family protein"
                     /protein_id="HET8765421.1"
                     /translation="CPLIIDSMRQTWKALDPAAQAQVDLLAVSFDPERDSVAALKAYA
                     DKRQLAAPPWTLARARQGDVRQLSGVLGLQYRQLPDGEFNHSSELILLDAEGRIVART
                     TKMGRADPELVAAIKRIASGG"
BASE COUNT          406 a          962 c          880 g          365 t
ORIGIN      
        1 gatgcccgcg cgcagcagtc gatcccccgc cgacgccacc agccccggcc cgaccatcgc
       61 cgccagccac gcgaacgcga gcggcagcag cacgccggcg gccatcagca aaccgcctgc
      121 cccagtttgc aagccggcca ccagcgcgat cacgccgaga ttgagcgccg catgcagcca
      181 cggcgcgctg cgcggccagc gcaccgaagt gctgccggcc accggcagga attgcagcag
      241 gctgccgaac atcgcgttgc cgagcacgcc gagcgtccac acgtgcacca gcgccagcgt
      301 cgccggctgc cagcgcgaac gcagcgcggc gtcggcatcg accagcagca agcagccgcc
      361 ggccaccgcc cagcaaggca tcgacaacaa aaagcgcagc ggcaggccgg ccgccggcgc
      421 ctcgtcaagc ttgagcttcg ccatccaccg gccgcctgat caccacgcgc acgctgccat
      481 cggccgccgc cgcatccggc tccgcctcga aacccatcgc cgccaattcc atcagcagcg
      541 gacgcggcag catcggcgtc agcacggcaa cggcttcgcc gggcgcaagc cggtcggctg
      601 cctccagcgc gcgcaccatc ggttccggcg ccgcaagccg gcgcagatcg agttcatcgc
      661 aagtcatcga cgcattgcat cgtttgccgg caatcccggc gctgatgcaa gtcaagcaca
      721 cccggtgccg cggcgtgcga cccgcggatc atgcgggccg ggcttcaacc cgccccccaa
      781 tcattgccgc gaggaaatcc gaccgcggca ggcggtccgg cgactcaatc cagcgcttgc
      841 gtacccgacc attcgagctg cagccagaac ttcgtgtcgt cgcggccgaa accgtcggcc
      901 tgatagcggg cgaccttggc gagcgcggtg acgccgcgcc cgagcgggcg accgacggag
      961 gcgtcccact cgctgccata gcgcccgccg cgcacggcgt ggaagtcgtg ccatgcgaca
     1021 ttccacgcca gctccgcggc cgcgggcagc ttgccgccca gcgccacgta gcggtcgttc
     1081 aagccacccg ccggggtgct ggtgaactgg ttgtcccagc cgttgaacac gtgcggcgag
     1141 gtgagcggcg tctgcagcgc ggtgtggccg tcgccgccga ggtgctccca gccaaggcgc
     1201 gcggtcacgc cggacagcgt ccacgcgggc tcgatcagcc aatagttgtg ggtgaagcgc
     1261 aacgggttgt tggcgtagtc ggtctgccgc gcggcttcca gctgccagcc gaaaccgtcg
     1321 ccggccggct tgccggtcca gcgcgcgccc caggtggccg acgaggcggt gggcacgtcg
     1381 cgatccttgt tgaggtagct gtagcccacc cacgcctgcc gcgcatgggt gtacttcacg
     1441 ttgaccagat gggtgtcgag ccggcgctcg cgcgccagcg ggctcagcgc cttgtgcgtg
     1501 gccgcgcggt gcacgcggtc cagccacgca tagcgcaccg tccagtcgga cgcgggctgc
     1561 cacacggcgg ataccgcgtc gaaggtctgc gggtgctggc gccacgcggc atcgttcacc
     1621 cagcgctggt tgtcgaacac cagcgcctgg cggccgacgg cgacgccaag cgtgctgcct
     1681 tgccagccca gccacgcctg gctcacttcg gcggtctgcg ggtcggcgat caccgggtag
     1741 cgcgtgcggc cgttcgcgcc gctgttgtag tcgtcgccgg ccgccgccac gccattgccc
     1801 tgcaggtagg cgcgcaggcc gttgtccagc tgcaggcgca ggccgaggcg caggcgcgcg
     1861 gtatccgcct tcgcatcgcg cgcgaacgca tcgctgtcga cctgctcgtg gcggatgcgc
     1921 acgttccaat cgaccagcca cggcgatgcc gcagcgtccg catcggtcgt cgttgctgca
     1981 tggacggaag gcgtggcggc aaaggccagc gccgcgaggc aggccgcagc cagcgggcgg
     2041 aatcggttgg acatcggggt gttccatcgt ggaagtgcgc gcactttccg ggagcgtcgg
     2101 catggcgaga ttgactgccg tcactttcgc cggaagggct gcgcaagtgt gacaagccgc
     2161 cacacgccgg ccaaacaaga agccgccatg acggcggcct ggttcggcat atgcggacgt
     2221 ctggacgtcc gtctcgaata tttatccacc gctggcgatg cgcttgatcg cagccaccag
     2281 ctccgggtcg gcgcgaccca tcttcgtggt gcgcgcaacg atgcggccct ccgcgtcgag
     2341 caggatcagt tcgctcgaat ggttgaactc gccgtcgggc agctgccggt actgcagccc
     2401 cagcacgccg gacagctggc gcacatcgcc ctgcctcgcc cgtgccagcg tccacggcgg
     2461 cgccgcgagc tggcgcttgt ccgcgtaggc cttgagcgcc gccacgctgt cgcgctcggg
     2521 atcgaaactc accgcgagca ggtcgacctg cgcctgcgcc gctggatcga gcgccttcca
     2581 cgtctgccgc atgctgtcga tgatgagcgg aca
//
LOCUS       DASSVL010000535         2008 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_534578, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000535 DASSVL010000000
VERSION     DASSVL010000535.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2008)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2008)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2008
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_534578"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..396)
                     /locus_tag="VFM52_09400"
     CDS             complement(<1..396)
                     /locus_tag="VFM52_09400"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HET8765422.1"
                     /translation="MRDGRMPVMRPSVLPDASRFLCWQPFVRGSRFVSWSPHARGVAM
                     VAGAAAVWSTGGLIVRHIEADTWTIVFWRGAFALMTLLLFMAIRDGRDMLARFRELGW
                     GGLGVAICFGSAATSFVIALHHTSVATILF"
     gene            complement(406..1287)
                     /locus_tag="VFM52_09405"
     CDS             complement(406..1287)
                     /locus_tag="VFM52_09405"
                     /inference="COORDINATES: protein motif:HMM:NF015431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /protein_id="HET8765423.1"
                     /translation="MWLPSLRGLRAVEAALRLGSFAAAAKELGVTQTAISRLVKEVER
                     QLARPLFERKANQSRPTTFALSLQSGLSDGFRRLEATVAEARRAADDPTITLSVGPTF
                     AMRWLIPHLTEFHAKHPEIDLRLATTISREVTPGPDTLAAIRLAGSHVSGFVSDALFS
                     GRLMAVCRRDIAKRLKTPADLARETLLDVRHSPEDWPRWLAAAGLPNRSQFHLVAFDF
                     SAFAIQAALDGLGVAIIRAPYIADDLREGRLVAPFPLAIEESQMRWRLIYRVEARSHA
                     AFRTFRRWLLAKARAES"
     gene            1427..>2008
                     /locus_tag="VFM52_09410"
     CDS             1427..>2008
                     /locus_tag="VFM52_09410"
                     /inference="COORDINATES: protein motif:HMM:NF014035.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TSUP family transporter"
                     /protein_id="HET8765424.1"
                     /translation="MVVALAVAALGTTFLSGIFGMIGGLILMGVLLLFLPVPAAMTLH
                     AITQMTANGWRAIVWHRHIMWRILPSYLLGSATVFGLLAWAQFSPPKAWVYLCLGLMP
                     FAARVVPREHAPDIRRKGAPALVGACVMALHVLAGVSGAVLDMFFLARDLDRRLVVAT
                     KAMCQSLGHAFKFAYFTFVAIAPLEVEPATVSRA"
BASE COUNT          341 a          654 c          706 g          307 t
ORIGIN      
        1 gaacaggatg gtggcgaccg acgtgtgatg caacgcgatg acgaagctgg tcgctgcgct
       61 accgaagcag atcgcgaccc ccagtccgcc ccagccgagc tcgcgaaacc gggccagcat
      121 gtcccggcca tcacggatcg ccatgaagag caggagcgtc atcaacgcga acgcgccgcg
      181 ccagaacacg atggtccagg tatcggcctc gatgtggcgc acgatcaggc caccggtgct
      241 ccacaccgcg gcagcaccgg caaccatcgc gacaccgcgc gcatgaggcg accaagacac
      301 gaaacgggat cccctgacaa agggttgcca gcataggaag cgcgaagcgt ctggcaagac
      361 ggacggccgc atgactggca tgcggccgtc gcgcaagatg tggtgtcagc tctcggcgcg
      421 cgccttggcg aggagccagc ggcgaaaggt gcggaaagcg gcgtggctgc gcgcctccac
      481 ccgatagatc aggcgccagc gcatctgcga ctcctcgatg gccagcggga agggcgcgac
      541 cagccggcct tcgcgcagat catcggcgat gtagggcgcg cggatgatgg ccacgcccag
      601 cccgtccagg gcggcctgga tggcgaaggc ggaaaagtcg aaggccacga ggtggaactg
      661 cgagcggttg gggagtccgg ccgccgccag ccagcgcggc cagtcttcgg gcgagtgacg
      721 gacatcgagc agcgtctcgc gcgcaagatc ggcgggcgtc ttcagccgct tggcgatgtc
      781 gcgccggcac accgccatca agcggccgga gaacagcgcg tcgctgacga atccggagac
      841 gtgcgagccg gcgaggcgga tggccgcgag ggtatcgggg ccgggtgtta cctcgcggct
      901 gatggtggtg gcaaggcgca gatcgatctc aggatgcttg gcgtggaact ccgtcagatg
      961 cggaatgagc caccgcatcg cgaaagtcgg gccgacggag agcgtgatgg tcggatcgtc
     1021 agcggcacgg cgcgcctcgg ccaccgttgc ctccagccgg cgaaagccgt cactcaggcc
     1081 ggattgcagc gacagggcga aggtggtggg acgcgactgg ttggccttgc gctcgaacag
     1141 ggggcgagcg agctggcgct caacctcctt cactaggcgc gagatggcgg tctgcgtgac
     1201 tcccagctcc ttggccgccg cagcaaagct gccgaggcgc agcgcagcct ccacggcgcg
     1261 caacccacgc aggctcggca gccacatcgt cgtccacccc aatctgtaat cggtctagct
     1321 cgagtaaacc ggacttgctc cgggggccga tactggcgga aattgccgcc gggcggaaga
     1381 ccgcttctcg cccatccggg ggatcagcct gatgtttgat tggagcatgg tcgttgcact
     1441 cgcggttgcg gcgctcggca ccacgttcct cagcggcatc ttcggaatga tcggcggcct
     1501 gatcctgatg ggcgtcctgc tgctgtttct gccggttccg gccgccatga ccttgcacgc
     1561 catcacgcag atgacggcga acggctggcg cgccatcgtg tggcaccgcc acatcatgtg
     1621 gcggatcctg ccaagctacc tgctcggcag cgcgaccgtg ttcgggctgc tggcgtgggc
     1681 gcaattctcc ccgccgaagg cctgggtcta tctctgcctc gggctcatgc cgttcgcggc
     1741 gcgggtggtg ccgcgcgagc atgcacccga catccgccgg aagggcgccc ccgcactggt
     1801 cggcgcgtgc gtgatggcgt tgcatgtgct ggcgggcgtc tcgggagcgg tgctcgacat
     1861 gttcttcctc gcccgcgacc tcgaccggcg gctggtggtc gcgaccaagg ccatgtgcca
     1921 gagcctgggc catgccttca agttcgcgta tttcaccttc gtggcgattg caccgctgga
     1981 ggtggagccc gccaccgtct cgcgcgcg
//
LOCUS       DASSVL010000536         5648 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_463893, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000536 DASSVL010000000
VERSION     DASSVL010000536.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 5648)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5648)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5648
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_463893"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..781
                     /locus_tag="VFM52_09415"
     CDS             <1..781
                     /locus_tag="VFM52_09415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008436658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DNA primase"
                     /protein_id="HET8765425.1"
                     /translation="ALDAALPRLRDGRQAWFLFLPDPEDPDSLVRKEGKDGFRARLNQ
                     ATPLSDYFFEHLAQDVDTSSLDGRARLAERARPLIAKLPDGAFRDLMAAELEKRTGAR
                     AMLAPGATRPVPPRTGTQRSLVRSAIALLLAQPGLADQVEKPYAFLHLDKPGVALLAE
                     LMDVARSRPGINPAMLVEHFAERGEYPALQKLMAAVVVGEPEAQRIEFMEALTRMGEQ
                     AVALRRAALLEKMRSAPLDEAEKAELRNLLAARVRRPGAPD"
     gene            843..1466
                     /locus_tag="VFM52_09420"
     CDS             843..1466
                     /locus_tag="VFM52_09420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008436660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HET8765426.1"
                     /translation="MELLDRLITIFAENGYAAVWIALLICGLGLPLPEDVTLVAGGVI
                     SGLGYANVHTMFLMCMAGVLLGDTTIFVVGRRYGTAILKWRWVARIVTPLRYRIVQRK
                     FTRYGNRVLFVARFLPGLRTTIYLTAGVTRKVSLLRFILIDTVAAAISVPIWVYLGYF
                     GANNHEWLAKWLQRGQNSLWVIVAIAIAGIGWAWWRSYRKRRLSRDD"
     gene            complement(1559..1837)
                     /locus_tag="VFM52_09425"
     CDS             complement(1559..1837)
                     /locus_tag="VFM52_09425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012202397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal/formaldehyde-sensitive transcriptional
                     repressor"
                     /protein_id="HET8765427.1"
                     /translation="MSHVASDKPRLLARVRRIRGQVEALERAIDGEAACADVLHQIAG
                     VRGAIQGLLREVMEGHIREHVAGRPGVSEAERERGAEELIDVLRRYFK"
     gene            1917..2768
                     /locus_tag="VFM52_09430"
     CDS             1917..2768
                     /locus_tag="VFM52_09430"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HET8765428.1"
                     /translation="MAALAAAVLFGASTPLAKALLHDVPPVQLAGMLYLGSGVGLATI
                     RGLRDHGWRAPGLSGTEWRWLLLAVGFGGVLGPVLLMLGLARTPASSASLLLNLEAVL
                     TALLAWVVFRENANRRIVLGFALIVAGALLLALPDAAQPVGLGSGALFIAGACLCWAL
                     DNNFTCKVSATDAMFIAGLKGGVAGIVNTAIAFALGAHWPSLHVTGMALGVGLLGYGI
                     SLVLFVLALRGVGSARTGAYFSTAPFIGAVIAVGAFGEPASGRFWFAAILMAIGVWLH
                     LTERRPA"
     gene            complement(2782..5412)
                     /gene="mgtA"
                     /locus_tag="VFM52_09435"
     CDS             complement(2782..5412)
                     /gene="mgtA"
                     /locus_tag="VFM52_09435"
                     /EC_number="7.2.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007806719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015444 - P-type magnesium transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015693 - magnesium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium-translocating P-type ATPase"
                     /protein_id="HET8765429.1"
                     /translation="MNKPFSRMAEKVVAPAHVLAAADAFRDSGELLRALDTSLQGLDE
                     ARISERLHRDGANEVLHEKPPHWSRQLLRAFKNPFIVVLLVLAGVQLATDGSDLTGPV
                     IVAVMVGISVLLSFTQEYRSAIAAEKLKAMVRNTATVTRCASDGHSEQIEVPVGELVA
                     GDVVHLGAGDMVPADLRLLAAKDLFVSQAILTGESLPVEKVAPAQAAGSESAAPLDLP
                     TICYMGTNVVSGAATAVVVATGPRSYLGSLAHSMTGQAVQTSFDRGVNSVSWLLIRFM
                     AVMVPIVFLVNGLDKGDWTQAFLFALSVAVGLTPEMLPLIVTANLAKGALAMSKRKVV
                     VKRLNAIQNFGAMDVLCTDKTGTLTLDKIVLERHLDLNGEESEDALEYGYLNSRFQTG
                     LKNLMDKAVLTHRDLEPVAAQYRVVDEIPFDFQRRRMSVVVARDEREHLLICKGAVEE
                     MLAICTFAQVGEQVEPMTDERRREIRAMTHHLNEDGLRVLVVAVRRAPATERAWSVAD
                     EAELTAVGCLAFLDPPKDSAATAIAALHAHGVAVKVITGDNEAVTRKICREVGLDVTH
                     SVQGRDVEPLDDAALDALVARTTVFAKMSPLQKAAVVKSLQRQGHTVGFLGDGINDAP
                     ALHDADVGISVDTATDIAKESADIILLEKNLMVLEEGVLEGRVTFGNIIKYIKMTASS
                     NFGNMFSVLVASAFLPFLPMLPLQILVLNLLYDISQLSIPFDRMDDDYLHHPRKWDAS
                     DIGRFMVWIGPVSSIFDITTFWLMWHVFGANSIEHQALFQSGWFVESLLTQTLIVHMI
                     RTRRIPFLQSAAAAPVLGLTTAIIAIGIAIPYTGIGAKLGMLPLPPVFFAWIAATVLT
                     YCVLTQLVKVRYMRRYGRWL"
BASE COUNT          853 a         1965 c         1895 g          935 t
ORIGIN      
        1 ggcgctggat gccgcgttgc cgcgcctgcg cgacggccgc caggcctggt tcctgttcct
       61 gcccgatccg gaggatcccg actcgctggt acgcaaggag ggcaaggacg gcttccgcgc
      121 gcggctgaac caggcgaccc cgctgtccga ctacttcttc gagcacctcg cgcaggacgt
      181 cgatacctcc agcctcgacg gccgcgcgcg cctggccgag cgcgcgcggc cgctgatcgc
      241 aaagctgccc gacggcgcgt tccgcgatct catggccgcc gagctggaaa agcgcaccgg
      301 cgcgcgcgcc atgctcgccc cgggcgcaac ccggccggta ccgccccgga ccggaaccca
      361 gcgctcgctg gtgcgcagcg cgatcgcgtt gctgctggcg cagccgggcc tggcggacca
      421 ggtggaaaag ccctacgcct tcctgcacct ggacaagcct ggcgtcgcgc tgctcgccga
      481 actgatggac gtcgcgcgca gccgcccggg catcaatccg gcgatgctgg tcgagcattt
      541 cgccgaacgc ggcgaatacc cggcgctgca gaagctgatg gccgccgtgg tcgtcggcga
      601 acccgaggcg cagcgcatcg aattcatgga agcgctgacg cgcatgggcg aacaggcggt
      661 ggcgctgcgc cgcgcggcgc tgctggaaaa gatgcgcagc gcgccgctcg acgaggctga
      721 aaaggccgag ctgcgcaacc tgctcgcggc gcgcgtgcgc cgtcccggcg cgccggattg
      781 agccgtgatg tgcggacgga cgaatatggg atcatgcgct cttgcgtgcg actggggcgc
      841 tgatggaact gcttgatcga ctcatcacga tcttcgccga gaacggttac gccgcggtgt
      901 ggatcgcgct gctcatctgt ggcctcgggc tgccgctgcc ggaagacgtg acgctggtcg
      961 ccggcggggt gatctccggc ctcggctacg cgaacgtgca caccatgttc ctgatgtgca
     1021 tggccggtgt gctgctcggc gacaccacca tcttcgtcgt cggtcgccgc tacggcacgg
     1081 cgatcctcaa gtggcgctgg gtcgcacgca tcgtgacgcc gctgcgctac cgcatcgtgc
     1141 agcgcaagtt cacccgctac ggcaaccgcg tgctgttcgt cgcgcgcttc ctgcccggcc
     1201 tgcgcacgac gatctacctg accgccggcg tcacccgcaa ggtttccctg ctgcgcttca
     1261 tcctgatcga caccgtcgcc gccgcgatca gcgtgccgat ctgggtctac ctcggctact
     1321 tcggcgccaa caaccacgaa tggctcgcga aatggctgca acgcggccag aacagcctgt
     1381 gggtcatcgt cgccattgcc attgccggca tcggctgggc gtggtggcgc agctaccgca
     1441 agcggcgact gagccgcgac gactaggcgt tcggcagtga tgtcggccgc atcccggtgg
     1501 actgccacac gagcaacggt cgctccccat ccgggtgacg ccgacggacc gatccaggct
     1561 atttgaagta gcggcgcaac acgtcgatca gctcttcggc gccccgctcg cgctcggcct
     1621 cgctgacgcc gggacgtccc gcgacgtgct cgcggatgtg cccttccatg acctcgcgca
     1681 acaggccctg gatcgccccg cggacgccgg cgatctggtg cagcacgtcg gcacacgccg
     1741 cctcgccgtc gatcgcgcgt tcgagcgcct cgacctggcc gcggatgcgc cgcaccctgg
     1801 ccagcaatcg gggcttgtcg ctggcaacgt ggctcatcca ggtattcctg tcatataggg
     1861 taggtgggta tagtacatgg gtgaaacccg cgcgtgccta ccctttgcgt tcggccatgg
     1921 cagcgctcgc cgcggcggtg ctgttcggtg ccagcacgcc gctggccaag gccttgctgc
     1981 acgatgtgcc gccggtgcaa ttggcgggga tgctttatct cggcagcggc gtcggcctcg
     2041 ccacgatccg cggcctgcgc gaccacggct ggcgagcgcc ggggctgagc ggcacggaat
     2101 ggcgatggct gctgctcgcg gtcgggttcg ggggcgtgct cgggccggta ttgctgatgc
     2161 tcggcctggc acgcacgcca gcgtcgagcg cgtcgttgct gctgaacctc gaagccgtgc
     2221 tgacggcgct gctcgcctgg gtcgtgttcc gcgagaacgc gaaccggcgg atcgtcctcg
     2281 gtttcgccct gatcgtggcc ggcgcgctgc tgctggcgct gcccgacgcc gcgcaacccg
     2341 tcggcctcgg cagcggcgct ttgttcattg cgggcgcctg cctgtgctgg gcgctggaca
     2401 acaacttcac ctgcaaggta tccgcaacgg acgcaatgtt catcgccggg ctcaagggcg
     2461 gggtcgccgg catcgtgaac acggccatcg cgtttgcgct cggcgcgcac tggccgtccc
     2521 tgcacgtgac cggcatggcg ctgggcgtcg gcctgcttgg ttacggcatc agcctcgtgc
     2581 tgttcgtgct ggcgctgcgt ggcgtgggct cggcgcgcac gggcgcctat ttctccacgg
     2641 ccccattcat cggcgcggtg atcgccgtcg gcgcattcgg cgaaccggca tccgggaggt
     2701 tctggttcgc ggcgatcctg atggccatcg gcgtatggct gcacctcacc gaacgccggc
     2761 cagcctgatc cgccgtgctg gtcacagcca gcgcccgtag cgacgcatgt agcgcacctt
     2821 caccagctgg gtcagcacgc aataggtgag cacggtggcg gcgatccagg cgaagaacac
     2881 cggcggcagc ggcagcatgc cgagcttggc gccgataccg gtgtagggaa tggcgatgcc
     2941 gatcgcgatg atcgcggtgg tgagcccgag caccggcgcc gccgccgcac tctgcaggaa
     3001 cggaatgcgc cgggtgcgga tcatgtgcac gatcagcgtc tgggtgagca ggctttcgac
     3061 gaaccagccg gactggaaca gcgcctggtg ctcgatcgag ttggcgccga acacgtgcca
     3121 catcagccag aaggtggtga tgtcgaagat cgagctgacc ggcccgatcc acaccatgaa
     3181 gcgaccgata tcgctggcgt cccacttgcg tgggtggtgc aggtagtcgt cgtccatgcg
     3241 gtcgaacggg atcgacagct gcgagatgtc gtagagcagg ttcagcacca ggatctgcag
     3301 cggcagcatc ggcaggaacg gcaggaatgc gctcgccacc agcacgctga acatgttgcc
     3361 gaagttcgag ctggcggtca tcttgatgta cttgatgatg ttgccgaagg tgacgcggcc
     3421 ttccagcacg ccctcctcca gcaccatcag gttcttctcc agcaaaatga tgtcggccga
     3481 ctccttggcg atgtcggtgg cggtgtccac cgagatgccg acatcggcgt cgtgcagcgc
     3541 cggcgcgtcg ttgatgccgt cgccaagaaa acccacggtg tggccctggc gctgcagcga
     3601 cttcaccacc gccgccttct gcagcggcga catcttggcg aacaccgtgg tgcgcgccac
     3661 cagcgcgtcg agcgcggcat cgtcgagcgg ctcgacatcg cgcccctgca ccgagtgggt
     3721 gacgtccagg cccacctcgc ggcagatctt gcgggtcacc gcctcattgt cgccggtgat
     3781 caccttcacc gcgacgccgt gcgcgtgcag cgcggcgatc gcggtggcgg ccgaatcctt
     3841 cggcgggtcg aggaaggcga ggcagcccac cgcggtgagc tcggcctcgt ccgccacgct
     3901 ccacgcacgc tccgtggccg gcgcacgacg taccgccacc accagcacgc gcaggccgtc
     3961 ctcgttcaag tggtgcgtca tcgcgcggat ctcgcgccgg cgctcgtcgg tcatcggctc
     4021 gacctgctcg ccgacctgcg caaacgtgca gatcgccagc atctcctcga ccgcgccctt
     4081 gcagatcagg aggtgctcgc gctcgtcgcg cgccaccacc accgacatcc gccggcgctg
     4141 gaaatcgaat ggaatctcat ccaccacgcg gtactgcgcg gccaccggtt cgaggtcgcg
     4201 atgggtgagc accgccttgt ccatcaggtt cttgaggccg gtctggaagc ggctgttcaa
     4261 gtagccgtac tcgagcgcgt cctcggactc ctcgccattc aagtcgaggt gccgttcgag
     4321 cacgatcttg tcgagcgtca gcgtgccggt cttgtcggtg cacaacacgt ccatcgcgcc
     4381 gaagttctgg atcgcgttga gccgcttcac caccaccttg cgcttggaca tcgccagcgc
     4441 gcccttcgcc aggttggcgg tgacgatcag cggcagcatt tccggcgtga ggcctaccgc
     4501 gaccgacagg gcgaacagga acgcctgcgt ccagtcgccc ttgtccagtc cgttgaccag
     4561 gaacacgatt ggcaccatca ccgccatgaa gcggatcagc agccagctca ccgagttgac
     4621 gccgcggtcg aagctggtct gcaccgcctg cccggtcatg ctgtgcgcca gcgagccgag
     4681 atagctgcgc ggcccggtcg ccaccaccac cgcggttgcg gcgccggaga ccacgttggt
     4741 gcccatgtag cagatcgtcg gcaggtcgag cggcgcggcg ctctcgctgc cggcggcctg
     4801 cgccggcgcc accttttcca ccggcaacga ctcgccggtg aggatcgcct ggctgacgaa
     4861 cagatccttt gccgccagca ggcgcaggtc ggccggcacc atgtcgccgg caccgaggtg
     4921 cacgacgtcg ccggccacca gttcgccgac cggtacctcg atctgttcgc tgtggccgtc
     4981 cgaggcgcag cgcgtcaccg tggcggtgtt gcgcaccatc gccttgagct tctcggccgc
     5041 gatcgccgac cggtactcct gggtgaagct cagcagcacg ctgatgccca ccatcaccgc
     5101 aacgatgacc ggcccggtca ggtcgctgcc gtcggtcgcc agctgcacgc cggccagcac
     5161 cagcagcacc acgatgaacg ggttcttgaa cgcgcgcagc agctgccgcg accagtgcgg
     5221 cggcttctcg tgcaagacct cgttggcgcc gtcgcggtgc aggcgctcgc tgatgcgcgc
     5281 ctcatcgaga ccctgcagcg aggtgtcgag cgcgcgcagc agctcgccac tgtcacggaa
     5341 tgcatcggcc gctgccagca cgtgtgcggg tgccacgacc ttctcggcca tgcgggaaaa
     5401 aggcttgttc atgcaaacgc caccatggct cttgccgccg gcaaccgcgg cagcacgcgc
     5461 cgttcggcgc gaccggtcaa aacgaggaag cggcggtcac cgtgcgggcg accgccgtgc
     5521 gccactacgc gcgtgctggc ggtggccagc tgcggtgggg ccgggcgatc acgccgcgcg
     5581 cgccgacagt tgcggcggca agccgaccgt ggtcaccgcc accgtcggca tttcactggc
     5641 actctggg
//
LOCUS       DASSVL010000537         2401 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_605442, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000537 DASSVL010000000
VERSION     DASSVL010000537.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2401)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2401)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2401
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_605442"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            200..325
                     /locus_tag="VFM52_09440"
     CDS             200..325
                     /locus_tag="VFM52_09440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8765430.1"
                     /translation="MANGFEPDHLVHLADDASEHAKVYVAKQPDDPPYLYRDDQA"
     gene            373..1662
                     /locus_tag="VFM52_09445"
     CDS             373..1662
                     /locus_tag="VFM52_09445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008435234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HET8765431.1"
                     /translation="MTVLLLFLLCATAAAATQPKGDWLLLPDRVWTADGDVAHAGWAV
                     LVHDGAIAAVGPAASIQAPAGTQRIELPGATLTPGLIDLHSHLFLHPYNEMSWNDQVL
                     TESQAYRTLLAARHARDTLLAGFTTLRDLGTEGAGYADVAVKRAIDDGLIPGPRLFVA
                     TRAIVATASYGPGPRGFRPDLELPGGAQEVSGVDQAMAAVREQAARGADWIKLYGDYR
                     VGPDGGTAPTFTPAELKALVDTAHQIGRPVSVHAASDAGVRMAVEAGVDSVEHGYGAS
                     EATFRMMKQRGIAYVPTLTAVEATAEYFQHYVPGKSEPTERMREADRGFRTALKAGVT
                     IGNGSDVGVFRHGDNWREPAAMVAHGMTPAQALHAATDVAAKILRQPQHFGRIAPGLA
                     ADLVAFAGDPSRQIRALEHPVFVMKAGVTYLAPAATP"
     gene            1813..>2401
                     /locus_tag="VFM52_09450"
     CDS             1813..>2401
                     /locus_tag="VFM52_09450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017462866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HET8765432.1"
                     /translation="MQLDQVKAVITGGASGLGHAVAQHLVAHGGKVALFDVNEEKGQV
                     AAKELGAAARFVRTDVTSEDGVAANVAAAREAMGGLNMVMNCAGILGAGRVLGKQGPM
                     PLATFTTTLLVNLVGSFNVAKAAAALMQGNEAGEDGERGVIVNTASVAAYEGQIGQAA
                     YSASKGGVVGMTLPMARELSRFGIRVMTIAPGVFWT"
BASE COUNT          372 a          879 c          822 g          328 t
ORIGIN      
        1 gcttggctga caccgtggac ttcccgcatc cgtccggtgg acgcgccatg caaccggcaa
       61 ccatcaccgg cggcgcgtcc gggcccgacc actcggtagc gcagcctcca ggatgcgctg
      121 gcgacgatct gctgctggca gggggtgcaa cgcgtgcgcc gccatttcct gcctgccaca
      181 ctgatgggca ccgacgacct tggcaaacgg tttcgaaccg gaccatctgg tccacctggc
      241 cgacgacgcc agcgaacatg cgaaggtgta cgtggcgaaa cagccggatg acccgccgta
      301 cctgtaccgg gacgaccaag cctgatcgac gaaggaaacg aaaccgtgca cgcccgcccg
      361 atgatccgct ggatgacagt actgctcctg ttcctgcttt gcgccacggc ggctgcggca
      421 acgcaaccga aaggcgactg gctgttgttg cccgaccgcg tgtggaccgc cgatggcgac
      481 gtcgcgcacg ctggctgggc cgtgctggtg cacgacggcg ccatcgccgc cgtcggcccg
      541 gccgcgtcga tccaggcacc ggccggtacg cagcggatcg agctgcccgg cgccacgctc
      601 acgcccgggt tgatcgacct gcattcgcac ctgttcctgc acccgtacaa cgagatgtcg
      661 tggaacgacc aggtgctgac cgagtcgcag gcctaccgta ccctgctcgc cgcgcggcat
      721 gcgcgcgaca ccctgctggc cggcttcacc acgctgcgcg acctcggcac cgagggcgcg
      781 ggctatgccg acgttgcggt gaagcgcgcg atcgatgacg gcctgatccc cggcccgcgc
      841 ctgttcgtgg ccacccgcgc gatcgtcgcc accgccagct acggtcccgg cccgcgcggc
      901 ttccgcccgg atctcgaact gcctggcggt gcgcaggagg tcagcggcgt cgaccaggcg
      961 atggcggcgg tgcgcgagca ggctgcgcgc ggcgccgact ggatcaagct ctacggcgac
     1021 taccgcgtcg gccccgacgg cggcaccgcg cccaccttca cgccggcgga actgaaggcg
     1081 ctggtggaca ccgcccacca gatcggccgt ccggtcagcg tgcacgccgc cagcgatgcc
     1141 ggcgtgcgca tggcggtgga ggccggcgtg gacagcgtgg aacacggcta tggcgccagc
     1201 gaggccacct tccgcatgat gaaacagcgc ggcatcgcct acgtgcccac gctcactgcc
     1261 gtcgaggcca ccgcggagta cttccagcac tacgttcccg gcaagagcga gcccaccgaa
     1321 cgcatgcgcg aggccgaccg cggcttccgc accgccttga aggccggcgt gacgatcggc
     1381 aacggcagtg acgtcggcgt gttccgccac ggcgacaact ggcgcgagcc ggcggcgatg
     1441 gtggcccacg gcatgactcc cgcacaggcg ctgcacgcgg ccaccgacgt ggcagcgaag
     1501 atcctgcgcc agccgcagca cttcggccgc atcgcgcccg gcctggccgc cgacctcgtc
     1561 gcgtttgccg gcgaccccag ccggcagatt cgcgccctgg aacacccggt cttcgtgatg
     1621 aaggccggcg tcacctatct cgcgccggcc gcgacgccgt gaccgacgca ttcggcaccc
     1681 gcccgttggc gccggccgac gacgcggcat cgccgcgccg gtacacgggc tggacgacgc
     1741 cggcggccga gcccgctgca ctgccactcg gctagtattg cgggttttca gcatccgatt
     1801 cggggacacc ccatgcaact cgatcaggtc aaggcggtca tcaccggcgg cgcatccggg
     1861 ctcggccacg cggtggcgca gcatctcgtc gcccacggcg gcaaggtcgc gctgttcgac
     1921 gtcaacgagg agaagggcca ggtcgccgcg aaggagcttg gcgccgccgc acgcttcgtc
     1981 aggaccgacg tcaccagcga ggacggcgtg gccgcgaacg tcgccgccgc gcgcgaggcg
     2041 atgggcggtc tgaacatggt gatgaactgc gccggcatcc tcggcgccgg gcgcgtgctg
     2101 ggcaagcagg gcccgatgcc gctggccacg ttcaccacca cgctgctggt gaacctcgtc
     2161 ggcagcttca acgtggccaa ggccgccgcg gccctgatgc agggcaacga ggccggcgag
     2221 gacggcgagc gcggcgtgat cgtcaacacc gcttccgttg ccgcctacga gggccagatc
     2281 ggccaggccg cgtactcggc ctccaagggc ggcgtggtcg gcatgaccct gccgatggcg
     2341 cgcgaactct cgcgcttcgg gatccgggtg atgaccatcg ccccgggcgt gttctggacg
     2401 c
//
LOCUS       DASSVL010000538         2031 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_408024, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000538 DASSVL010000000
VERSION     DASSVL010000538.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2031)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2031)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2031
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_408024"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1119
                     /locus_tag="VFM52_09455"
     CDS             <1..1119
                     /locus_tag="VFM52_09455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019399725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HET8765433.1"
                     /translation="ERMNRVQGFDPADRTLTVQPGMPLEAVHTAAREHGLVYPVDFAA
                     RGSCSIGGNIATNAGGIRVIRYGNTREWIAGLKVVAGNGELLELNRSLVKNSSGYDFR
                     QLLVGSEGTLGIVVEATLKLTAPPPPAQTMLLALPSMDAVLATFRLFRTRLALQAFEF
                     FTDIALKHVLAHGAQRAIDGDHPYYVVTEYDAPDEAAQEAALAVFGEALEQGSVLDGV
                     VAQSEAQAQALWRLREGITESLAQHEPYKNDVSVRIGAVPAFLHEMQALLAREYPHIE
                     VVWFGHIGDGNLHINVLKPADMADAAFITQCEHVTKLLAEVLKAHGGSISAEHGIGLV
                     KKPYLDSTRSAAEIALMRGVRKVFDPNGILNPGKLFEA"
     gene            1382..>2031
                     /gene="pip"
                     /locus_tag="VFM52_09460"
     CDS             1382..>2031
                     /gene="pip"
                     /locus_tag="VFM52_09460"
                     /EC_number="3.4.11.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019467409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004177 - aminopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0030163 - protein catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl aminopeptidase"
                     /protein_id="HET8765434.1"
                     /translation="MSAPRRTLYPEIEPYDRGMLKVSALHTLYYEQCGNPQGKPVVFV
                     HGGPGGGTNPKCRRFFDPARYRIVLFDQRGCGQSTPHAELRENTTWDLVADMERVREH
                     LGIARWQVFGGSWGSTLALAYAQAHPDKVTELVLRGIFMLRRWELEWFYQKGCDAIYP
                     DAWETYLAAIPEAERGDLMSAYHRRLTSEDAATRVAAARAWSVWEGATSFLWQDKS"
BASE COUNT          321 a          688 c          705 g          317 t
ORIGIN      
        1 gagcggatga accgcgtgca gggcttcgat ccggccgacc gcacgctcac cgtgcagccg
       61 ggcatgccgc tggaagcggt gcacacggcg gcgcgcgagc atggtctggt ctacccggtg
      121 gatttcgccg cgcgcggctc ctgttccatc ggcggcaaca tcgccaccaa tgccggcggc
      181 atccgggtga tccgctacgg caacacccgc gagtggatcg ccgggctcaa ggtggtcgcc
      241 ggcaatggcg agctcctgga gctcaatcgc tcgctggtga agaactccag cggctacgac
      301 ttccgccagc tgctggtggg ttccgaaggc acgctcggca tcgtcgtcga agccacgctc
      361 aagctgaccg cgccgccgcc gccggcgcag accatgctgc ttgccttgcc gagcatggat
      421 gcggtgctcg ccacgttccg cctgttccgt acccggctcg cgctgcaggc cttcgagttt
      481 ttcaccgaca tcgcgctcaa gcacgtgctg gcgcatggcg cgcaacgcgc gatcgacggc
      541 gatcacccgt actatgtggt gaccgaatac gacgcgcccg acgaggctgc gcaggaggcc
      601 gcgttggcgg tcttcggcga ggcgctggag cagggcagcg tgctggatgg cgtggtcgcg
      661 cagagcgagg cgcaggcgca agccttgtgg cggttgcgcg agggcatcac cgaaagcctg
      721 gcgcagcacg aaccgtacaa gaacgacgtc tcggtgcgca tcggcgcggt gccggcgttc
      781 ctgcacgaga tgcaggcgct gctggcgcgc gagtacccgc acatcgaagt ggtgtggttt
      841 ggccacatcg gcgacggcaa cctgcacatc aatgtgctga aacccgctga catggccgat
      901 gcggcattca tcacccagtg cgagcacgtc accaagctcc tggccgaggt gctcaaggcg
      961 cacggtggca gcatctccgc cgaacacggc atcggcctgg tcaagaagcc gtatctcgac
     1021 tccacgcgca gcgccgccga gatcgcactg atgcgcggcg tgcgcaaggt gttcgacccg
     1081 aacggcatct tgaacccggg caagctgttc gaggcttgag gcaccgcgtc gggcgcgggc
     1141 ccggcgtgtc gggctgcgcg gcctgtgctg cggcatggcg ccgggaggct tgcggcgcac
     1201 gcaggcaccg gccgtttggc cgcggaggcc aggcattcgc caccggtggc ttccggccga
     1261 agctggcccg cgcgccaggc ggcgatgacg ggatcccgcg catggctggc tttgccgtcc
     1321 ggatgctttc tgcggcccgg acttctaatc ttgcggttct tcaagtccaa cgggagccgt
     1381 catgtccgcg ccacgccgca cgctgtaccc cgagatcgaa ccgtacgacc gcggcatgct
     1441 caaggtttcg gcgctgcata cgctctacta cgagcagtgc ggcaacccgc agggcaagcc
     1501 ggtggtgttc gtgcacggtg gccccggcgg cggcaccaac cccaaatgcc ggcgcttctt
     1561 cgaccccgcg cgctaccgca tcgtgctgtt cgaccagcgc ggctgcggcc agtccacccc
     1621 gcacgcggag ctgcgcgaga acaccacgtg ggatctggtg gccgacatgg aacgggtgcg
     1681 cgaacatctc ggcatcgccc gctggcaggt gttcggcggc tcgtggggct caacgctggc
     1741 gctggcctac gcgcaggcgc acccggacaa ggtgaccgag ctggtgctgc gcggcatctt
     1801 catgctgcgc cgctgggagc tcgaatggtt ctaccagaag ggctgcgacg cgatctatcc
     1861 ggacgcgtgg gaaacctacc tggcggcgat cccggaggcc gagcgcggcg acctgatgag
     1921 cgcctaccac cgccgcctca ccagcgagga tgccgccacc cgcgttgcgg cggcgcgcgc
     1981 ctggtcggtg tgggaaggtg ccaccagctt cctgtggcag gacaagagcc a
//
LOCUS       DASSVL010000539         3738 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1113811,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000539 DASSVL010000000
VERSION     DASSVL010000539.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3738)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3738)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3738
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1113811"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(54..608)
                     /locus_tag="VFM52_09465"
     CDS             complement(54..608)
                     /locus_tag="VFM52_09465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007080084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilZ domain-containing protein"
                     /protein_id="HET8765435.1"
                     /translation="MNNASWNEFEQRVSVEELLHVAIEPLAWPMPQALALALAERNGN
                     ALAAIAALEERRVETPDDDNPLVQEMRRMDAKLTALVDIVNRLLVPPGTLPAQRLVRF
                     NARGAVLAADVALPGDAVLLGLRFEHCRSLPLELPALREKQFDDGRTFVAFTSLSDAQ
                     SDAIERLVFRHHRRKVAEARQLPG"
     gene            complement(700..1002)
                     /gene="fliT"
                     /locus_tag="VFM52_09470"
     CDS             complement(700..1002)
                     /gene="fliT"
                     /locus_tag="VFM52_09470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007080087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar protein FliT"
                     /protein_id="HET8765436.1"
                     /translation="MSPSTFEDNSALTSALVITRAMLAAARAEDWQQLLQLEEARAPL
                     VHRQHHPDAATQAQLGQILACDRQLQALLVTARDALAHQWQRERDRAQAIAAYAQA"
     gene            complement(1006..1425)
                     /gene="fliS"
                     /locus_tag="VFM52_09475"
     CDS             complement(1006..1425)
                     /gene="fliS"
                     /locus_tag="VFM52_09475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007511364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009288 - bacterial-type flagellum
                     [Evidence IEA];
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar export chaperone FliS"
                     /protein_id="HET8765437.1"
                     /translation="MGFGYGAGAYQQVRSHGGVESADKHGLITLLMDGALERLVKARA
                     HMMRGETGPKGETISRCIEILGGLRDALDRKADPTLVDRLDSLYEYMSRRLLQANLRD
                     DAGIIDEVSRLLQQVRDSWVQIGPSPATAPVGRVAGA"
     gene            complement(1441..2835)
                     /gene="fliD"
                     /locus_tag="VFM52_09480"
     CDS             complement(1441..2835)
                     /gene="fliD"
                     /locus_tag="VFM52_09480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007511366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009288 - bacterial-type flagellum
                     [Evidence IEA];
                     GO_process: GO:0007155 - cell adhesion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar filament capping protein FliD"
                     /protein_id="HET8765438.1"
                     /translation="MAITVGSTTPTTGLLTSMGVGSGIDVASLVEKLVAARKAPQQNQ
                     ITNQAALANTQLSSLGQIGAALSALQSAMASITDGSAFNARTVTSADTDVLGATASGS
                     PVSGSYKIDVTQLATALKASSGAFADSSAKVGTGTLTLAVDGQSMSLDLTDSNNSLAQ
                     VRDAINKASDNPGISATIVTGTDGAHLVLSGTRTDAANGFVVSSSGGDGGLAALDYDA
                     AAGSGNALTVITAAQDAQYSIDGVAGHGAGNSVSGAIDGLTLNLVASGQTTLTVANDP
                     SKGSSALSNLVNTYNSFVGIYQNLTKYDATSGTAGAMIGDATINGINSTLSRLVGGVA
                     NGTSLAALGISLQVDGTLKLDNGKLTQAMSDGGKLASQLFGGDTGLAAQLNGQLDQWV
                     GPNGTLAGRTSSISQQLSALKDQQATLDSRMADLTARYQAQFTALDTLMSKLNSTSSY
                     LQQQFDALNNINKK"
     gene            complement(2901..>3738)
                     /locus_tag="VFM52_09485"
     CDS             complement(2901..>3738)
                     /locus_tag="VFM52_09485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008434160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0071973 - bacterial-type
                     flagellum-dependent cell motility [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="flagellin"
                     /protein_id="HET8765439.1"
                     /translation="STTSKTFTVDGNTVSLNAAYATQGAMVTAVQGQLNSAAAGKYTV
                     AASGANGFTITTTATGASSAMTIGGADSAFVNTNVAGTDAVAGTPANLALATGDLTID
                     GTDMAGSYKDAQSLVDAINAKGISGVAAYYDSSSKSVHLNAQSALTVDGTKAGAGAGN
                     LGFSGAGATAIAVSGDLASSNVKTVSGANDTISRIDAALGTISSMRSDLGAVQNRFTS
                     TIANLQTISQNLNSSRSQIQDADFAAETANMSSANILQQAGVSVLAQANATTQSVLKL
                     LQ"
BASE COUNT          491 a         1197 c         1352 g          698 t
ORIGIN      
        1 tctcgcgacg ccgagggcgc atccgcgccc gcggcggcgg ggggtcggcg aactcaaccg
       61 ggaagctggc gcgcttctgc cactttgcgt cggtgatgac gaaaaacgag gcgctcaatt
      121 gcgtcacttt gcgcgtcgct cagcgaggtg aaagcgacga aggttcgacc atcgtcgaat
      181 tgcttttcgc gcagcgccgg caactccagc ggaagactgc ggcaatgctc gaaacgcagg
      241 cccagcagca ctgcgtcgcc gggcaacgcg acgtccgcag cgagcaccgc gccgcgtgcg
      301 ttgaagcgca ccaggcgctg tgccggcagc gtgccgggcg gcaccagcag gcggttgacg
      361 atgtccacca gcgcggtgag cttggcatcc atgcggcgca tttcctgcac cagcggattg
      421 tcgtcgtcgg gcgtctcgac acggcgttct tccagcgccg cgatcgccgc cagcgcattg
      481 ccgttgcgct cggccagcgc cagcgccagc gcctgcggca tcggccaggc cagcggctcg
      541 atcgccacgt gcaacagttc ctcgacgctg acccgctgct cgaactcgtt ccagctggcg
      601 ttgttcatcg tgcggctccc ggatatcggc tgtcggcctt ggcggcaagg cccgcatggc
      661 gcgggccatc tgccgtgcat gatgacatcg ccgggcgatt caggcctgcg cgtaggccgc
      721 gatggcctgg gcccggtcac gctcgcgctg ccactggtgg gcaagcgcat cgcgtgccgt
      781 caccagcagg gcctgcagtt ggcgatcgca ggcgaggatc tggccgagct gggcctgggt
      841 ggccgcgtcg gggtggtgct ggcgatgcac cagcggggcg cgcgcttctt ccagctgcag
      901 cagttgctgc caatcttccg cgcgcgcggc ggcgagcatc gcgcgggtaa tcaccaacgc
      961 gctggtcaac gccgagttgt cctcgaaagt tgacggcgac atggttcagg cgcctgccac
     1021 gcgaccgacg ggggcggttg ccggcgacgg gccgatctgc acccagctgt cgcgcacttg
     1081 ctgcagcagc cggctgacct cgtcgatgat gccggcgtcg tcgcgcaggt tggcctgcag
     1141 caggcgccgg ctcatgtatt cgtagagcga atcgaggcgg tcgaccaggg tcggatcggc
     1201 cttgcggtcg agcgcatcgc gcaagccgcc gaggatctcg atgcagcggc tgatggtttc
     1261 gcccttgggg cccgtctcgc cgcgcatcat gtgcgcgcgg gccttgacca ggcgctccag
     1321 tgcgccatcc atcaacaacg tgatcaggcc gtgcttgtcg gccgactcca cgccgccgtg
     1381 cgaacgaacc tgctggtagg cgcctgcgcc gtaaccgaat cccatgatcg tctcctgccc
     1441 ttacttcttg ttgatgttgt tcaacgcgtc gaactgctgc tgcaggtagc tgctggtgct
     1501 gttgagcttg ctcatcagcg tgtccagcgc ggtgaactgc gcctggtagc gcgcggtgag
     1561 gtcggccatg cggctgtcca gcgtggcttg ctggtccttc aacgcgctca gctgctggct
     1621 gatgctgctg gtgcggccgg ccagcgtgcc gttggggccg acccactggt cgagctggcc
     1681 gttcaactgt gcggccaggc cggtatcgcc gccgaacagc tggctggcga gcttgccgcc
     1741 gtcgctcatc gcctgggtca gcttgccgtt gtccagcttc agcgtgccgt ccacctgcag
     1801 cgagatgccc agcgcggcca gcgaggtgcc gttggccaca ccgcccacca gccgcgagag
     1861 cgtgctgttg atgccgttga tggtggcgtc gccgatcatg gcgccggccg tgccactggt
     1921 ggcgtcgtac ttggtgaggt tctggtagat ccccacgaag ctgttgtagg tgttgaccag
     1981 gttgctcagc gcgctgctgc ccttgctggg gtcgttggcc acggtcagcg tggtctggcc
     2041 cgaagcgacc aggttgaggg tcaggccgtc gatggcgccg ctgacgctgt tgccggcgcc
     2101 gtggccggct acgccgtcga tgctgtactg cgcatcctgt gcggcggtga tgacggtgag
     2161 cgcgttgccg ctgccggcgg ccgcgtcgta gtcgagtgcg gccaggccgc cgtcgccgcc
     2221 gctgctgctc accacgaaac cgttggccgc gtcggtgcgg gttccgctga gcaccaggtg
     2281 cgcgccgtcg gtgccggtga cgatggtggc gctgatgccg gggttgtcgc tggccttgtt
     2341 gatggcgtcg cgaacctggg ccagcgagtt gttgctgtcg gtgagatcca ggctcatcga
     2401 ctggccatcc accgcgaggg tgagcgtgcc ggtgcccacc ttggcgctgc tgtcggcgaa
     2461 cgcgccggag gaggccttga gtgcggtggc cagctgggtg acgtcgatct tgtagctgcc
     2521 gctgaccggg gagccggagg ccgtggcacc gaggacgtcg gtgtcggcgg aggtcaccgt
     2581 gcgcgcgttg aaggcgctgc cgtcggtgat cgaggccatg gccgattgca gcgcggagag
     2641 cgcggcgccg atctggccca ggctggacaa ttgggtgttg gccagggcgg cctggttggt
     2701 gatctggttc tgctgcggcg cctttcgggc ggccaccagc ttttccacca gcgaggccac
     2761 gtcgatcccg gaacccacgc ccatggaggt cagcaaaccc gtggtgggtg tggtggagcc
     2821 taccgtgata gccatggaca tcggttcctg taatggggga aacggccgcg gatggtccac
     2881 ggccgtttcg ggtcaagcga ttactgcagg agcttgagca cgctctgggt ggtggcgttg
     2941 gcctgcgcca gcaccgacac gccggcctgc tgcaggatgt tcgcgctgga catgttggcc
     3001 gtctcggccg cgaagtcggc atcctggatc tggctgcgcg acgagttcag gttctgcgag
     3061 atggtctgca ggttggcgat ggtggaggtg aagcggttct gcaccgcgcc caggtcgctg
     3121 cgcatcgagc tgatcgtgcc cagcgcggcg tcgatgcggc tgatggtgtc gttcgcgccg
     3181 ctgaccgtct tcacgttgct cgaggcgagg tcgccactga cggcgatcgc ggtagcgccc
     3241 gcgccgctga agcccaggtt gcccgcgccc gcgccggcct tggtgccgtc cacggtcagc
     3301 gccgactgcg cattcaggtg caccgacttg ctgctgctgt cgtagtacgc ggccacgccg
     3361 gagatgccct tggcgttgat cgcgtcgacc aggctctgcg cgtccttgta gctgccggcc
     3421 atgtcggtgc cgtcgatggt caggtcgccg gtggccaggg ccaggttggc cggagtgccg
     3481 gcgacggcgt ccgtaccggc aacgttggtg ttgacgaaag ccgaatccgc gccgccgatg
     3541 gtcatcgcgc tgctggcgcc ggtggccgtg gtggtgatgg tgaagccgtt ggcgccgctg
     3601 gcggcgaccg tgtacttgcc cgcggccgcc gaattcaact gcccctgcac cgccgtgacc
     3661 atcgcgccct gggtagcgta ggcagcattc aggctgaccg tgttgccgtc gaccgtgaag
     3721 gtcttgctgg tcgtgctg
//
LOCUS       DASSVL010000540         2678 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_859887, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000540 DASSVL010000000
VERSION     DASSVL010000540.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2678)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2678)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2678
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_859887"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1547)
                     /locus_tag="VFM52_09490"
     CDS             complement(<1..1547)
                     /locus_tag="VFM52_09490"
                     /inference="COORDINATES: protein motif:HMM:NF024944.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HET8765440.1"
                     /translation="MSSRAPQGPQGRAWIRRIRLINWHGHENATLDVMGDMLAIIGEN
                     GSGKSLILDAIDWALFPASNKQFNAAAREGGRTSKRTLSNTILFFDPHGIEHANKGWR
                     RQRTVGYCAVEVEHEGEGRWVYGSAAAATPHSSHPWYYALPTTLDQVAFLEVTPQGQA
                     PLQMQDFRARNETFANTGGAVFNATQVEDYNRLVARRLLNIEGADWQRRYDALYDVLH
                     RMLGLKVDDALVSDPSGVVRHFLPIVDRPHLERLVEGLEGIQRIHRDIEEYGKLSAML
                     TGVVEARRKYHEAALSHGGLMWLRAQWASDDAAQALATAEAKLREAESEARQTEANEE
                     AAYAEEGAVRRELEALQQLHQGEVVQAVSQANEAVAAAQRDQDRAERELRQAQERLQR
                     SETSVATARQHLRSEEESARARLAELRDRGAKALGALPSTLADGWKQVIAEPGDQILA
                     DVLHDAWVATDGDLAALDAHAKRIGDASRKTNEARQRERDARTQHEGAQRALQSARQA
                     LWARWDR"
     gene            complement(1544..2377)
                     /locus_tag="VFM52_09495"
     CDS             complement(1544..2377)
                     /locus_tag="VFM52_09495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8765441.1"
                     /translation="MATYTGQREQDLARRVRRMLVEQAAILQDESPDEFLWLTQHYVT
                     EQRFFEDELGARLELRLGRWARAYWPTAPRQRELLVADVFELTARKQTAYACLIRAYR
                     SVRLLESGDSATVFRFSELFRYVAEEGQRLSPWLSFDEAVINEALATRGEADAEDDEE
                     LLEEKSTSRSRKRSTSGATATSSRARASAPVRASAAQRVRANQRAFYQAFAAFERYRL
                     IRRIGADDRQLPGEQFKLDERDFSGVYEFTDLIDRFLPPAGLVAHDDLAEGDGDEGGD
                     A"
BASE COUNT          385 a          910 c          911 g          472 t
ORIGIN      
        1 atccgatccc agcgcgccca gagcgcctgg cgcgccgatt gcagcgcccg ctgcgcgccc
       61 tcatgctggg tacgggcgtc gcgttcgcgc tggcgggcct cgttcgtctt acggctggca
      121 tcgccgatgc gctttgcatg ggcgtccagc gcggcgaggt cgccatcggt cgccacccag
      181 gcgtcgtgca gcacgtcggc gagaatctgg tcgcccggct cggcgatgac ctgtttccag
      241 ccgtcggcca gcgtggacgg caacgcgccc agagccttcg cgccacggtc gcgcagttcc
      301 gcgagccgcg ctcgcgcgct ctcctcttcg gagcgcagat gttgccgggc agtggcgacc
      361 gacgtttccg accgctggag gcgttcctgc gcctgacgca attcccgctc ggcgcgatcc
      421 tggtcgcgct gggcggcggc caccgcctcg ttggcctgag agaccgcctg caccacctcg
      481 ccctggtgaa gctgttgcag cgcctccagc tcgcggcgga cggcgccctc ctcggcgtag
      541 gcggcctcct cgttggcctc ggtctggcgc gcctctgatt ccgcctcgcg cagcttcgct
      601 tcagccgtgg cgagcgcctg ggcggcgtcg tcgctggccc actgcgcccg cagccacatc
      661 agcccgccgt ggctcagcgc cgcttcgtga tacttgcgcc gcgcctctac cacgccggtc
      721 agcatcgcgc tcagcttgcc gtactcttcg atgtcgcgat gaatccgttg gatgccctcc
      781 agtccctcga ccaatcgctc caggtgaggg cggtcgacga tgggcagaaa gtggcggacg
      841 acgccgctgg gatcggagac gagcgcgtca tctaccttga ggccgagcat acggtgcagc
      901 acgtcataga gcgcgtcata gcggcgctgc cagtcggcgc cttcgatgtt gagcagacgc
      961 cgcgccacca gccggttgta atcctcgacc tgggtggcat tgaagaccgc gccgccggtg
     1021 ttggcgaagg tctcgttgcg ggcacggaaa tcctgcatct gtagcggcgc ctgcccctgc
     1081 ggagtgacct ccagaaaggc gacctgatcg agcgtggttg gcagcgcgta gtaccaggga
     1141 tgcgacgagt gcggggtggc cgccgccgcc gagccataga cccagcgccc ctcgccctcg
     1201 tgctcgacct ccacggcgca atagccgacg gttcgctgcc gccgccagcc tttgttggca
     1261 tgctcgatgc catgcggatc gaagaagagg atggtgttgc tgagggtgcg cttactggta
     1321 cgcccgccct cacgcgcggc ggcgttgaac tgcttgttcg aggcggggaa gagcgcccag
     1381 tctatcgcgt cgaggatcag cgacttgccg gagccgttct cgccgatgat agcgagcatg
     1441 tcgcccatca cgtcgagggt ggcgttctcg tggccgtgcc agttgatcag acggatacgg
     1501 cgaatccacg cgcgtccctg tggtccctgt ggcgcccggc tgctcatgcg tcgcctcctt
     1561 cgtcgccatc accctctgcg agatcgtcgt gcgccaccag cccggcgggc ggcaggaagc
     1621 ggtcgatcag gtcggtgaac tcatagacgc cgctgaagtc gcgctcgtcc agtttgaact
     1681 gctcgccagg caactggcgg tcatcggcgc cgatgcggcg aatcagccga tagcgctcga
     1741 aggcggcgaa cgcctgatag aatgcccgtt ggttggcgcg cacgcgctgg gccgcgctcg
     1801 cccgcaccgg agcggacgcc ctggcgcggc tgctggtggc ggtggctccg gaggtgctgc
     1861 gcttgcggct gcgggaggtc gacttctcct ccagcagctc ttcgtcgtcc tcggcgtcgg
     1921 cctcgccacg ggtcgccagc gcctcattga tgacggcctc gtcgaagctg agccagggcg
     1981 agagccgctg cccctcctcg gcgacatagc ggaagagttc ggaaaagcgg aagacggtgg
     2041 cggaatcgcc cgattcgagc aggcgcacac tgcgataggc gcggatcagg caggcatagg
     2101 cggtctgctt gcgcgcggtc agctcgaaga catcggcgac gagcagctcg cgctggcggg
     2161 gagcggtcgg ccagtaggcg cgcgcccagc gtccgagccg tagctccagc cgcgcgccca
     2221 gctcatcctc gaagaagcgc tgctcagtga cgtagtgctg ggtgagccag agaaactcat
     2281 ccggcgactc atcctgcaga atcgcggcct gctccaccag catgcggcgc acccgccgtg
     2341 ccagatcctg ctctcgttgt cctgtatagg tcgccatagg tttgtctccg gatgatatct
     2401 atgtcaccga tttgggcagt ctcggccgtt tacggccaga gtaattactg aaaggcttga
     2461 aagcctgcca gggcggtgct gccgcccggc tcgcacggtg ggcgacgcta cgaccgggac
     2521 ggcggcgagc caccggcatt gcggcgaccc aggatgccga acggccagcg gcgtccgttc
     2581 tgttcgtttt gccctggctg ctgctccata tcttcgagcg gagccgtctc tggcgcggcc
     2641 agtggatgcg tccccgccga gccgagcgag atggctga
//
LOCUS       DASSVL010000541         2183 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1311509,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000541 DASSVL010000000
VERSION     DASSVL010000541.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2183)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2183)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2183
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1311509"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..265)
                     /locus_tag="VFM52_09500"
     CDS             complement(<1..265)
                     /locus_tag="VFM52_09500"
                     /EC_number="3.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008215698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016799 - hydrolase activity, hydrolyzing
                     N-glycosyl compounds [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-ribosylglycohydrolase family protein"
                     /protein_id="HET8765442.1"
                     /translation="MSVSRSDRVIGALLGAFVGDALALGPHWYYDLDELKRVYGEWID
                     GYTAPKPGRYHAGLAAGASSQAGFILALTLRSLVASDGYDEADF"
     gene            400..1077
                     /locus_tag="VFM52_09505"
     CDS             400..1077
                     /locus_tag="VFM52_09505"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015447312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HET8765443.1"
                     /translation="MGQQINIPTQRTRCIGGYLAQPPDKPKGGVIVVQEIFGVTAHIR
                     SVADRLAAAGYTALAPAFYDHLEAGLELAYDKSGVARGKRLADELGLDRAVEYVANAT
                     DAIRSAGRIGVVGFCWGGTVALLSAIRLGLPAVSYYGARNVPYLGVNPKAPVIFHFGE
                     KDRSIPAEAIAQHRELLPDMPVYTYPGAGHAFNRDVQDDPHYHEASAKLAWQRTLDFL
                     DKQVAHA"
     gene            1074..1490
                     /locus_tag="VFM52_09510"
     CDS             1074..1490
                     /locus_tag="VFM52_09510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017460393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HIT domain-containing protein"
                     /protein_id="HET8765444.1"
                     /translation="MNTPAFALDPRLEHDTHPVASLTLCDARLMDDLRFRWLILVPRR
                     AGAVEIADLSAEDRTQLWAEVDQCAAALRSTGPCTKLNLGALGNVVPQLHVHVVARME
                     GDSAWPGPVWGCAGRMAYAQNLLEQRIGALHKALAG"
     gene            complement(1600..2103)
                     /locus_tag="VFM52_09515"
     CDS             complement(1600..2103)
                     /locus_tag="VFM52_09515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008212275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8765445.1"
                     /translation="MTRLPTLLIRAAAALVLGSALVLGGCHKQGVKDQQLAAQWEGKF
                     DATIQSYKEGQFLIDGAVLSAVDAGSHFAYLRDIHKLPKTVLLMPSDDSKIRKVHLQY
                     LARMSIDYGFAAYYDRDGQITQINAVNTKARELKDHHAPMKIDDGQQCKSAAGCDSMD
                     QAAKQGY"
BASE COUNT          364 a          753 c          729 g          337 t
ORIGIN      
        1 agaaatccgc ctcgtcgtag ccgtcggatg cgaccagcga gcgcagggtc agcgcaagga
       61 tgaaacccgc ctgcgacgac gcaccggcgg ccaggccggc gtgatagcgg cccggcttcg
      121 gcgcggtgta gccgtcgatc cactcgccat agacgcgctt gagttcgtca aggtcgtaat
      181 accaatgcgg gccgagcgca agcgcatcgc cgacgaacgc gccgagcaag gcgccgatga
      241 cgcgatcact gcgggaaacc gacatgggcc actcctttcc gaagacctcg aaagtctacg
      301 ctgcgcggcg tgaaccccga tcgacgctgc ccgtcggcat gccggcttca ccggcacagc
      361 tcgtagaatc gaatccattg ctcgcacgga gacatcggca tgggtcagca gatcaacatc
      421 cccacccagc gcacgcgctg catcggcggc tacctcgcgc agccgccgga caagcccaag
      481 ggcggcgtga tcgtggtgca ggagatcttc ggcgtcaccg cgcatatccg cagcgtcgcc
      541 gaccggcttg ccgccgccgg ctataccgcg ctggcgccgg cgttctacga ccatctcgaa
      601 gccgggctgg aactcgccta cgacaagagc ggcgtcgccc gcggcaagcg cctggccgat
      661 gagctgggcc tggatcgcgc ggtggaatac gtcgccaacg cgacggacgc catccgttcc
      721 gccggcagga tcggcgtggt cggtttctgc tggggcggca ccgtggcgct gctctccgcg
      781 atccggctcg ggctgccggc ggtgagctac tacggcgcgc gcaacgtgcc gtacctgggc
      841 gtgaatccga aggcgccggt gattttccac ttcggcgaaa aggatcgcag catcccggcg
      901 gaagccatcg cccagcaccg cgagctgctg ccggacatgc cggtgtacac ctaccccggc
      961 gccggccatg cgttcaaccg cgacgtgcag gacgacccgc actaccacga ggccagcgcg
     1021 aaactcgcct ggcaacgcac gctcgacttc ctcgacaagc aggtggccca cgcatgaaca
     1081 cgcccgcgtt cgcgctcgac ccgcggctgg aacacgacac ccacccggtg gcctcgctca
     1141 cgctgtgcga cgcgcgcctg atggacgacc tgcgcttccg ctggctgatc ctggtgccgc
     1201 gtcgcgccgg cgcggtggag atcgccgacc tgtccgcgga agaccgcacg cagctgtggg
     1261 ccgaggtcga ccagtgcgcc gccgccctgc gcagcaccgg cccgtgcacc aagctcaacc
     1321 tcggtgcgct gggcaacgtc gtgccgcagc tgcacgtaca cgtcgtggcg cggatggaag
     1381 gcgacagcgc atggccgggc ccggtatggg gttgcgccgg ccgcatggcg tacgcgcaaa
     1441 acctgcttga acagcgtatt ggagcgttgc acaaggcact ggcgggctga acaccgggcc
     1501 acatggatac ggtggatcgg gcgtcggccc ggccacgccc cacgaaaaag ccggtcggga
     1561 cgcatcccga ccggctcgcc gcggcgcatc gccagccgct cagtaaccct gcttcgccgc
     1621 ctggtccatg ctgtcgcacc cagccgccga cttgcactgc tggccgtcgt cgatcttcat
     1681 cggtgcgtgg tggtccttga gttcgcgcgc cttggtgttg accgcgttga tctgggtgat
     1741 ctggccgtcg cggtcgtagt aggcggcaaa gccgtagtcg atcgacatgc gcgcgaggta
     1801 ctgcaggtgc accttgcgga tcttcgaatc gtcgctcggc atcagcagca cggtcttcgg
     1861 cagcttgtgg atgtcgcgca ggtaggcgaa gtggctgccg gcatccaccg cggagagcac
     1921 cgcgccgtcg atcaggaact ggccttcctt gtaggactgg atggtggcgt cgaacttgcc
     1981 ttcccattgc gcggcaagct gctggtcctt gacgccctgc ttgtggcaac cgccgagcac
     2041 cagcgcactg cccagcacga gcgcggcggc ggcgcggatc aacaaggtgg gcagacgggt
     2101 catgcgggtc tcctgcggtg gatcgctcaa tcagtcggga aagtgtactg cccgcacgcc
     2161 agccgatcgg cgctggtgca cgc
//
LOCUS       DASSVL010000542         5384 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1226984,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000542 DASSVL010000000
VERSION     DASSVL010000542.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 5384)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5384)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5384
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1226984"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(113..3391)
                     /locus_tag="VFM52_09520"
     CDS             complement(113..3391)
                     /locus_tag="VFM52_09520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007507495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase regulatory-like
                     domain-containing protein"
                     /protein_id="HET8765446.1"
                     /translation="MNSRIRARVLPLAIASLLLTALPALGQDTSSSISGRVLDASGQP
                     VAGATVQIVHEPSGTTKITTTGADGRYAAQGLRVGGPFDVTVSKAGMSQVEQKNVYLQ
                     LAQDTAVNLTVGAAAKEAKDLSAVTVSATALSQTFTADNKGISTNISQRELDAVPAPD
                     RSIQNIVRMDPRVVITDRERGEISAVGQNSRYNNITVDSMSANDPFGLNANGLPTLGT
                     PISMDTIAEYNISTVNYDVAIRRGLGANVNAVTKSGTNQFHGSVYYSFQNDDMIGDNL
                     QGASYKGFSRQWTGGATLGGPIIKDKLFLFASMEKSTQVAAGSPYGPEDSGAGAPVLG
                     LTTAQVNQIRDIAAQKYGMTNLGSVGGGNSNLLDKRYLGKVDWNITNNHRASFTYSET
                     KETKPIITGSPTNLRLSSGWYTTKVDNKSYALHLYDDWSDVFSTDTTVSYRNFDQNRG
                     PYNGVAMPDITVYPTTFGGPNVEFGTEYSSQANVLKVKTWNAAWAGTLFLGDHTIKGG
                     IDFERGEYYNLFLQNLYGSYVFENLTGGPSNGLDAFAQGLYYQYRHNRPADGLSLADT
                     AAAYNLNQWGVFLQDTWQFNNNLSVQYGVRVDIPLMTDRPLYNAKFANTFGRSNQTTI
                     NGNRVVQPRMSFNYAFDTELMTQLRGGAGLFISNPPGVWLGNIFSNSGMTQTQFNCGP
                     TQKGCQTNLPAFSPDPFAQNDGQAGTGQMTVNTVSPGFRIPSAWKFSLGFDKELPWWG
                     LIATVDYQHIKPRDAIWFQNLNTGAPTGVLPDGRLTFYKLPNLDPKAKGQQSLANSNP
                     AFSNANINLANSSKGKADSLTVSLKKPFADGWTAMTGLTWGRSTEVSPGTSSVALSNY
                     RYNYLTNPSENVASTSNYSIPLRFIASLTWQHNFFGDYATTASAFFDGHSASPYSWVF
                     GNDANGDSFVNDLVFIPKPGQVEFRPGTSQALIDQFYSYIQGNEYLRDHAGEIAKRNG
                     ARAGWINQLDLSFSQEIPGIFAGNKGVVRLDIYNFGNMLNKHWGVEKRVGFPGGRSLA
                     DFYGVDPATGKYIYDISCGGAKSCSSYIQNGHYSPQPIPVYINNNDDLAQRWSVLLTL
                     RYKF"
     gene            complement(3596..4198)
                     /locus_tag="VFM52_09525"
     CDS             complement(3596..4198)
                     /locus_tag="VFM52_09525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014403611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YhgN family NAAT transporter"
                     /protein_id="HET8765447.1"
                     /translation="MTPLSAGIMLFLIMDPLGNIPLFLSLLKAVPPKRRRHVMVRELL
                     IALGVLLGFLVGGQYLLHLLQLKQESISVAGGIVLFLIGIRMVFPPADGSGIFGKSTT
                     GGEPFIVPMAIPGVAGPSAMAALLLLTNTQPGRMVDWATALLLAWLATSIILLSSTYL
                     FRWLGESVLTALERVMGMVLIAMSVQMFMGGLAAFLHLQR"
     gene            complement(4254..5024)
                     /locus_tag="VFM52_09530"
     CDS             complement(4254..5024)
                     /locus_tag="VFM52_09530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008212935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HET8765448.1"
                     /translation="MSLSTVRLPAGFAPAPAALADRVVLVTGAYGGLGSAVARAAARA
                     GATVVITGKRKRLLEKLYDAMREEGLPEPVIHPLDMESATPRDYAALADGLRRDLGRL
                     DGIAHCAASFSGLTPLAVHRPDDWLRALHVNLNAPFALTQACLPLLQEAPDSAVVFVL
                     DDPERMARAHWGAYGVSKAALEQLASILHEETDESTLRVHAVLPAPMRTALRRQAYYG
                     ENTMLLPTPDATAEAIAWLLSAAGLRARGHLLDLREAP"
     gene            complement(5021..5347)
                     /gene="grxD"
                     /locus_tag="VFM52_09535"
     CDS             complement(5021..5347)
                     /gene="grxD"
                     /locus_tag="VFM52_09535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017462659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Grx4 family monothiol glutaredoxin"
                     /protein_id="HET8765449.1"
                     /translation="MDVTERIKSVLAAHPIVLFMKGTPEYPMCEFSSRAAQALHDAQA
                     SFHAVNVQADPEIRAALPHFANWPTFPQLFIQGEFVGGCDVVVDLKASGELARMASDV
                     SGTAHA"
BASE COUNT          890 a         1680 c         1834 g          980 t
ORIGIN      
        1 aagcttccgg cctcgatgcg cttgcggtca agaaaaaatc catgcggtgt gtgcagaaaa
       61 aaccggcgcc ctcgcgggcg ccggcgaaaa cctccacgcg tgccgccgtg gatcagaact
      121 tgtagcgcaa ggtgagcagc accgaccagc gctgggcgag gtcgtcgttg ttgttgatgt
      181 acaccggaat cggctgcggg ctgtagtggc cgttctggat gtagctgctg cagctcttcg
      241 ccccaccgca gctgatgtcg tagatgtact tgccggttgc cgggtcgacg ccgtagaagt
      301 cggccagcga acggccgccc gggaagccca cccgcttctc gacaccccag tgcttgttga
      361 gcatgttgcc gaagttgtag atgtccagcc gcaccacgcc cttgttgccg gcgaagatgc
      421 ccggaatctc ctggctgaag ctcaggtcga gctggttgat ccagccggca cgggcaccgt
      481 tgcgcttggc gatttcgcca gcgtggtcac gcaggtactc gttgccctgg atgtagctgt
      541 agaactggtc gatcagcgcc tggctggtgc ccggacggaa ctccacctgc cccggcttcg
      601 ggatgaacac cagatcgttc acgaagctgt cgccgttggc gtcgttgccg aacacccagc
      661 tgtacggcga ggcggagtgg ccgtcgaaga acgcgctggc cgtcgtcgcg taatcgccga
      721 agaagttgtg ctgccaggtc agcgacgcga tgaagcgcag cggaatcgaa tagttcgacg
      781 tgctggcaac gttctcgctc gggttggtca ggtagttgta gcggtagttg gacaacgcca
      841 cgctggacgt gcccgggctc acctcggtcg agcggcccca ggtcaggccg gtcatggccg
      901 tccagccgtc cgcaaacggc ttcttgagcg acacggtcag gctgtccgcc ttgcccttgc
      961 tgctgttggc gagattgatg ttggcattgg agaacgccgg gttcgagttg gccaggctct
     1021 gctggccctt ggccttcgga tcgaggttgg gcaacttgta gaacgtcagg cggccgtctg
     1081 gcagcacgcc ggtcggcgca ccggtattga ggttctggaa ccagatcgca tcacgcggct
     1141 tgatgtgctg gtaatccacg gtcgcgatca ggccccacca cggcagctcc ttgtcgaagc
     1201 ccaggctgaa cttccaggcg ctggggatgc ggaagcccgg cgacacggtg ttcaccgtca
     1261 tctgcccggt gcccgcctgg ccgtcattct gcgcaaacgg atcggggctg aacgccggaa
     1321 ggttggtctg gcaccccttc tgcgtcgggc cgcagttgaa ctgcgtctgg gtcatgcccg
     1381 agttggagaa gatgttgccc agccacacgc ccggtgggtt ggagatgaac aggccggcgc
     1441 caccacgcag ctgcgtcatc agctcggtgt cgaacgcata gttgaacgac atgcgcggct
     1501 gcaccacgcg gttgccgttg atcgtggtct ggttgctgcg cccgaacgtg ttggcgaact
     1561 tggcgttgta gagcgggcgg tcggtcatca gcgggatgtc gacgcgcacg ccgtactgca
     1621 ccgacaggtt gttgttgaac tgccaggtgt cctgcaggaa cacgccccac tggttgaggt
     1681 tgtacgccgc agcggtatcg gccagcgaca ggccgtcggc cgggcggttg tggcgatact
     1741 ggtagtacag accctgcgcg aacgcgtcca gaccgttgct cgggccgccg gtcaggttct
     1801 cgaacacgta gctgccgtac aggttctgca ggaacaggtt gtagtactcg ccacgctcga
     1861 aatcgatgcc gcccttgatc gtgtggtcgc cgaggaacaa ggtgccggcc cacgccgcgt
     1921 tccaggtctt caccttgagc acgttggcct ggctcgagta ctcggtgccg aactcgacgt
     1981 tcgggccgcc gaatgtcgtc gggtacacgg tgatgtcagg catcgcgacg ccgttgtacg
     2041 ggccgcggtt ctggtcgaag ttgcggtagg acaccgtggt gtcggtcgag aacacgtccg
     2101 accagtcgtc gtacaggtgc agcgcgtagc tcttgttgtc gaccttggtg gtgtaccagc
     2161 cgctggacag ccgcaggttg gtcgggctgc cggtgatgat cggcttggtt tccttggtct
     2221 cgctgtaggt gaagctggcg cggtggttgt tggtgatgtt ccagtcgacc ttgccgaggt
     2281 agcgcttgtc gagcaggttg gaattgccgc cgccgacgct gccgaggttg gtcatgccgt
     2341 atttctgcgc ggcgatgtcg cggatctggt tgacctgcgc ggtggtcagg ccgagcaccg
     2401 gggcgccggc gccggaatcc tccgggccat acgggctgcc cgccgccacc tgcgtgctct
     2461 tttccatcga ggcgaataag aacagcttgt ccttgatgat cgggccgccg agcgtcgcgc
     2521 cgccggtcca ctgccgcgag aagcccttgt agctggcgcc ctgcaggttg tcgccgatca
     2581 tgtcgtcgtt ctggaacgag tagtacaccg agccgtggaa ctggttggtg ccgctcttgg
     2641 tcaccgcgtt cacgttcgcg ccgaggccgc ggcggatcgc cacgtcgtag ttcaccgtgg
     2701 agatgttgta ctcggcgatg gtgtccatcg agatcggcgt gccgagcgtc ggcaggccgt
     2761 tcgcgttcaa gccgaacggg tcgttcgcgc tcatcgagtc gacggtgatg ttgttgtagc
     2821 ggctgttctg gccgacggcc gagatttcgc cgcgctcgcg gtcggtgatg acgacgcgcg
     2881 gatccatgcg cacgatgttc tggatcgagc gatccggcgc cggcaccgca tccagttcgc
     2941 gctgcgagat gttggtggaa atgcccttgt tgtcggccgt gaaggtttgc gacaaggcgg
     3001 tggcggaaac cgtgaccgcg ctgaggtcct tggcctcctt ggccgcggca ccgacggtca
     3061 ggttcactgc ggtgtcctgc gccagctgca ggtagacgtt cttctgctcg acctgcgaca
     3121 tgccggcctt ggacaccgtc acgtcgaacg ggccaccgac gcgcaggccc tgcgcggcat
     3181 agcggccgtc ggcaccggtc gtggtgatct tggtggtgcc cgacggctcg tgcacgatct
     3241 gcaccgtggc gccggcaacc ggctggccgc tggcgtcaag cacgcggccg ctgatggagg
     3301 aggaagtgtc ctgccccagc gccggcagcg cggtcagcag caacgaggcg atcgccagcg
     3361 gcaaaaccct ggcgcggata cggctgttca tggtgtttcc ctcaagttcg caacgaaagt
     3421 tcttgtggtt gaaaccgaac agcacgcctc ccggttggct gggactgcgc gctcatggtt
     3481 tcccctgttc ttcaaagacc gcgggacgac ggtgacgagt ccgcctcgtc tgccaagcca
     3541 cttgttaagc cgagcttaac ggcattgtat gacagttcga cggcgcatcg aaacgtcagc
     3601 gctgcaggtg caggaaggcg gcgaggccac ccatgaacat ctgcaccgac atggcgatca
     3661 gcaccatgcc catgacgcgc tccagcgcgg tgagcacgct ctcgccaagc cagcggaaca
     3721 ggtaggtcga gctgagcagg atgatcgacg tcgccagcca ggccagcagc aaggccgtgg
     3781 cccagtcgac catgcgcccc ggctgggtgt tggtgagcag caacagggcc gccatggccg
     3841 aaggtccggc cacgccgggg atcgccatcg gcacgatgaa cggctcgccg ccggtggtgc
     3901 tcttgccgaa gatgccactg ccgtcggccg gcggaaacac catgcggatg ccgatcagga
     3961 acagcacgat gccgccggcg acgctgatcg attcctgctt gagctgcagc aggtgcagca
     4021 ggtactgccc gccgacgagg aagccgagca gcacgcccag cgcgatcaac aactcgcgca
     4081 ccatcacgtg gcgacggcgc ttcggcggca ccgctttcaa caggctcagg aacaacggga
     4141 tgttgccgag cgggtccatg atgagaaaca acatgatgcc ggccgacaac ggggtcatct
     4201 gcgattccat cagcgctccc cgccgtggca gtcgaagcag gtcgtgcgca ggttcacggc
     4261 gcctcccgca gatcgagcag gtgtccgcgt gcacgcaggc cggcagcgct cagcagccag
     4321 gcgatggcct cggcggtggc gtccggggtt ggcagcagca tggtgttctc gccatagtac
     4381 gcctgtcgcc gcagcgcagt gcgcatcggt gcgggcagta ccgcatgcac gcgcagcgtg
     4441 ctctcgtcgg tttcctcgtg caggatcgac gccagctgtt cgagcgccgc cttggagacg
     4501 ccgtaggcgc cccagtgcgc gcgcgccatg cgctcggggt cgtcgagcac gaacaccacg
     4561 gcgctgtcgg gcgcctcctg cagcagcggc aggcacgcct gggtgagcgc gaacggcgca
     4621 ttgagattga cgtgcaacgc gcgcagccag tcgtccggcc ggtgtaccgc caatggcgtc
     4681 aggccactga aactcgccgc gcaatgcgcg atgccgtcga gccggccgag gtcgcgacgc
     4741 aggccgtcgg caagcgcggc gtagtcgcgc ggcgtcgccg attccatgtc gagcggatgg
     4801 atcaccggct cgggcaagcc ttcctcgcgc atcgcgtcat acagcttttc cagcaagcgc
     4861 ttgcgcttgc cggtgatgac cacggtggca ccggcgcgcg cggccgcacg cgccaccgcg
     4921 ctgcccagcc cgccataggc gccggtgacc agcaccacgc gatcggccaa tgccgcagga
     4981 gccggcgcga acccggccgg aagccgcacg gtggacaggc tcatgcgtgg gcggtcccgg
     5041 aaacgtcgct ggccatgcgc gccagctcgc cggatgcctt gagatcgacc acgacgtcgc
     5101 agccgccgac gaactcgccc tggatgaaca gctgcgggaa cgtcggccag ttggcgaagt
     5161 gcggcaacgc cgcgcggatc tccggatcgg cctgcacgtt gactgcgtgg aacgacgcct
     5221 gtgcgtcgtg cagggcctgc gcggcgcggc tggaaaactc gcacatcgga tactcgggcg
     5281 tgcccttcat gaacagcacg atcgggtgcg cggcaagcac cgatttgatc cgctcggtta
     5341 cgtccatagg aaaagatttc atctttacaa tgcaggcgga tcgg
//
LOCUS       DASSVL010000543         2006 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1382385,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000543 DASSVL010000000
VERSION     DASSVL010000543.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2006)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2006)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2006
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1382385"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..708)
                     /locus_tag="VFM52_09540"
     CDS             complement(<1..708)
                     /locus_tag="VFM52_09540"
                     /inference="COORDINATES: protein motif:HMM:NF024189.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YXWGXW repeat-containing protein"
                     /protein_id="HET8765450.1"
                     /translation="MQGSKRFSVHRRLLARIAAAMLALAAIAAVPPPVQAGEFVSVTV
                     APPPLPVYAQPMIPGPGYIWTPGYWAWGGDGYYWVPGTWVLAPFIGALWTPGWWGWGS
                     GVYVFHPGYWGTRVGFYGGIDYGYGYNGQGYYGGHWYHGAFFYNRTVNNITNVRITNV
                     YNQTVVVNNTASRVSFNGGNGGTSVRPTPQQEAFAHEKHVEATPVQRQHVETASKDRS
                     LFAKQNHGEPAVAATQQA"
     gene            932..1795
                     /gene="bla"
                     /locus_tag="VFM52_09545"
     CDS             932..1795
                     /gene="bla"
                     /locus_tag="VFM52_09545"
                     /EC_number="3.5.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008216290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008800 - beta-lactamase activity
                     [Evidence IEA];
                     GO_process: GO:0030655 - beta-lactam antibiotic catabolic
                     process [Evidence IEA];
                     GO_process: GO:0046677 - response to antibiotic [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class A beta-lactamase"
                     /protein_id="HET8765451.1"
                     /translation="MDRRTLLKTAAWSLAALSLRPAHARPVATQAQLADLERRHGGRL
                     GVAILDVAGTRRVGHRADERFLMCSTHKVLTAGAVLARVDAGREQLDRRVVFGRDALL
                     AWAPVTSKRAGAPGMTVAELCAAAITVSDNTADNLLLESLGGPTAVTAFARTLGDPLT
                     RLDRFEPELNLGAPGDERDTTTPDAMLGSLRALLLGTALSAPSRGRLLGWMRATSTGL
                     DQLRAGAPNDWRVGDKTGSGPNGENNDVAIFQPPQSGPRLVTAFYVNPAASGGQRRAV
                     LAAVGRIAASV"
     gene            complement(1787..>2006)
                     /locus_tag="VFM52_09550"
     CDS             complement(1787..>2006)
                     /locus_tag="VFM52_09550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015448024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0017000 - antibiotic biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="penicillin acylase family protein"
                     /protein_id="HET8765452.1"
                     /translation="FVAVVEFGPQVSARAVTAGGESGHPGSPHFADEAERYASGNLRT
                     VYFWPDQLKGHTERVYHPGDTGASRTSD"
BASE COUNT          283 a          694 c          724 g          305 t
ORIGIN      
        1 ggcctgctgc gtcgcggcta ccgcgggctc gccgtggttc tgcttggcaa acagcgagcg
       61 atccttgctt gcggtctcga catgctgacg ctgcaccggc gttgcttcga catgcttctc
      121 atgcgcgaac gcctcctgct gcggcgtcgg ccgcaccgag gtcccgccat tgccgccatt
      181 gaagctgacg cggctcgccg tgttgttcac gaccaccgtc tgattgtaga cgttagtgat
      241 ccgcacattg gtgatgttgt tgacggtgcg gttgtagaag aacgcgccat ggtaccagtg
      301 gccgccgtaa tagccctggc cattgtagcc gtagccgtag tcgatgccgc cgtagaagcc
      361 gacgcgggtg ccccagtagc cggggtggaa cacgtacacg ccgctgcccc agccccacca
      421 gcccggcgtc cacagggcgc cgatgaacgg cgccagcacc caggtgccgg gcacccagta
      481 gtagccgtcg ccgccccacg cccagtagcc cggcgtccag atgtagccgg ggccggggat
      541 catcggctgc gcgtataccg gcagcggcgg tggggcgacg gtgaccgaca cgaactcgcc
      601 cgcctggacg ggcggcggca ccgccgcgat cgcggccagt gccagcatgg ccgcggcgat
      661 gcgtgccagc aggcggcggt gcacggaaaa ccgtttggac ccttgcatgg cgagttctcc
      721 cgttcgcggc gtcatgcctg atataacgcg cgatgggtgc cgccggccac gatctgccgg
      781 ccgtgggttg ggcgacgttc agcgccatcg cagcgggcgg catggcgcag cacccgtgcg
      841 ttgccatggt tccgccactg ggcggccatg cgcgacaccc gccggttcgg gcaccatgcc
      901 ggctccgaat atgccgcccg gatggattcc catggatcga cgcaccttgc tgaagactgc
      961 cgcgtggagc cttgccgcgc tgtccctgcg tccagcccac gcgcgcccgg tcgccacgca
     1021 ggcgcaactg gccgatctgg agcgccgcca cggcgggcgc ctgggggtcg ccatccttga
     1081 cgtggcgggc acgcgccgcg tcggtcaccg tgccgacgaa cgcttcctca tgtgcagcac
     1141 gcacaaggtg ttgaccgcgg gcgcggtgtt ggcgcgggtc gatgccggcc gcgagcaact
     1201 ggatcgacgc gtcgtgttcg gtcgggatgc gctgctggcg tgggcgcctg tgaccagcaa
     1261 gcgtgccggt gcaccgggca tgacggtggc cgagctgtgc gcggcggcga tcacggtgag
     1321 cgacaacact gcggacaacc tgctgctgga gagcctcggc gggccgaccg cagtgacggc
     1381 gtttgcacgc acgctcggcg atccgctgac ccggctcgac cgcttcgagc ccgagctcaa
     1441 cctcggcgcg ccgggcgacg agcgcgacac cacgacgccg gacgcgatgc tcggcagttt
     1501 gcgggcgttg ctgctgggca ccgcgctgtc cgcgccgtcg cgcgggcggc tgcttggctg
     1561 gatgcgcgcg accagcaccg ggctcgacca gttgcgcgcc ggcgcgccga acgattggcg
     1621 ggtgggcgac aagaccggca gcggcccgaa cggcgagaac aacgacgtcg cgatcttcca
     1681 gccgccgcag agcggcccgc gattggtgac ggcgttctac gtgaacccgg cggcgagtgg
     1741 cgggcagcgc cgcgccgtgc tcgccgcggt cgggcgcatc gcggcctcag tctgaggtgc
     1801 gcgacgcccc ggtgtcgccc gggtggtaca cgcgttcggt atgccccttg agctggtcgg
     1861 gccagaaata caccgtgcgc aggttgccgc tggcgtagcg ctcggcttcg tcggcgaagt
     1921 gcggagaacc gggatggccg ctctcgccac cggcggtgac ggcgcgcgcg ctcacctgcg
     1981 ggccgaactc caccacggcc acgaag
//
LOCUS       DASSVL010000544         3042 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_633775, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000544 DASSVL010000000
VERSION     DASSVL010000544.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3042)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3042)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3042
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_633775"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..201
                     /locus_tag="VFM52_09555"
     CDS             <1..201
                     /locus_tag="VFM52_09555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007807616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GMC oxidoreductase"
                     /protein_id="HET8765453.1"
                     /translation="YHPVGTCRMGPAGDPAAVVGADLRVHGVDGLRVADASIMPTITG
                     GNTNAPTIMIGEKCADLVRSAG"
     gene            206..1384
                     /locus_tag="VFM52_09560"
     CDS             206..1384
                     /locus_tag="VFM52_09560"
                     /EC_number="1.1.1.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014037557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-lactate dehydrogenase"
                     /protein_id="HET8765454.1"
                     /translation="MAWLACPATTADWRERARRRLPRFLFDYLDGGAGDERTLAANAQ
                     AFAGVALHQRVLVDVGAASTQATLAGQACAMPLALAPVGLTGLAARRGEAQAARAAAA
                     FGVPFALSTVGICPLAEVNAAAGVPAWFQLYMLRDRGAVRALLDAAWAAGTRTLVFTV
                     DLPRTGTRWRDVRHGIDARGLRPALIKALQLAARPGWVWNVALCGRPLGFGNLAAQVP
                     GARDPNAFKAWVDAQFDPTVTWRDIDWLRAQWRGRLLLKGILSVDDARQAVAVQADGL
                     VVSNHGGRQLDGAPPTLAVLPAIAAAVGSDIEVLVDGGVRSGTDVFRALALGARGVLV
                     GRPWVWALAAQGEAGVRQWLANWQREFTLAMMLTGVTRVADIGRAQLEPLKPFLQESP
                     "
     gene            1381..3036
                     /locus_tag="VFM52_09565"
     CDS             1381..3036
                     /locus_tag="VFM52_09565"
                     /inference="COORDINATES: protein motif:HMM:NF005760.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase large subunit"
                     /protein_id="HET8765455.1"
                     /translation="MNGAAALMKTLADAGVEVCFTNPGTSEMHFVAALDGEPRVRAVL
                     ALFEGVATGAADGYARMAGKPAATLLHLGCGLGNGLANLHNARKGRVPVLNIVGDHAT
                     YHVKYDAQLQSDIETVARNVSPGFVRTSASSANLCGDALDALAAARGLPGQVATLILP
                     ADVSWGEGAEPCPPPDASVAPAADAAAVAAVAAVLHDGEPTALLLGGHALREAPLRDA
                     ARLAQRCGVKLFAEVFPTRLERGAGVPAVERIAYLAEMAGVQLAPYKHLVLVDAKSPV
                     SFFAYPGKASDLVPPGCTVHTLSTPAEDAAASLAKLVAALGAGDVEPAVQAPLRPGRP
                     RGRLTAPKVCKAVGHLLPERAIVVDESITSGLMLGVMTQGAPRHDLLTLTGGAIGQGL
                     PNAVGAAMACLDRPVIALVGDGAAMYTIQALWTMARERLHVIAIVFNNASYSVLNVEL
                     DRVGSGTPGPKARGQLELGGAPLDFVALARGMGVAGTRVDRAEAFCTAFEHALKTPGP
                     HLIEACIPEALGGMKRRLLPWLLRSLPSLPAPVAQALKRKLAP"
BASE COUNT          370 a         1058 c         1157 g          457 t
ORIGIN      
        1 tatcacccgg tgggcacctg ccgcatgggc ccggcgggcg atccggcggc ggtcgtcggc
       61 gccgacctgc gcgtgcatgg cgtcgatggc ttgcgcgtcg ccgatgcgtc gatcatgccg
      121 acgatcaccg gcggcaatac caacgcgccg acgatcatga tcggcgagaa atgcgccgac
      181 ctcgtgcgta gtgcgggctg acgccatggc ctggcttgcc tgccccgcga cgaccgccga
      241 ctggcgcgaa cgcgcgcgtc ggcggctgcc gcggttcctg ttcgattacc tcgatggcgg
      301 tgccggcgac gagcgtacgc tcgccgcgaa cgcgcaggcc ttcgccggtg tcgcgctgca
      361 ccagcgcgtg ctggtcgacg tcggcgcggc gagcacgcag gcgacgctgg ccgggcaggc
      421 gtgcgcgatg ccactggcgt tggcgccggt cgggctgacc ggactcgcgg cgcgtcgtgg
      481 cgaggcgcag gcggcgcgcg cggcggctgc gttcggcgtg ccgttcgcgc tgtccaccgt
      541 gggcatctgt ccgttggccg aagtgaatgc ggcggcgggc gtgccggcgt ggttccagct
      601 ctacatgctg cgcgaccgcg gcgcggtgcg cgcgctgctg gacgccgcgt gggcggccgg
      661 cacccgaacg ctggtgttca ccgtcgacct gccgcgcacc ggcacgcgct ggcgcgacgt
      721 gcgccacggc atcgacgcgc gcggcttgcg gccggcgctg atcaaggcgt tgcagcttgc
      781 cgcgcgtccc ggctgggtgt ggaacgtcgc gttgtgcggc aggccgcttg gcttcggcaa
      841 ccttgccgcg caggtgcccg gcgcgcgcga cccgaacgcg ttcaaggcgt gggtggatgc
      901 gcagttcgat cccacggtga cctggcgcga catcgactgg ctgcgcgcgc aatggcgcgg
      961 gcgcctgctg ctcaagggca ttttgtcggt ggacgacgca cggcaggccg tggcggtgca
     1021 ggcggatggg ctcgtcgtct ccaaccacgg cggccgccag ctcgatggcg cgccgccgac
     1081 gctggccgtg ctgccggcaa ttgccgcagc cgtcggcagc gacatcgaag tgctggtcga
     1141 tggcggcgtg cgcagcggca ccgacgtgtt ccgtgcgctg gcgctcggcg cgcgcggtgt
     1201 gctggtcggt cggccgtggg tgtgggcgct ggccgcgcag ggcgaggccg gcgtgcgcca
     1261 atggcttgcg aactggcaac gcgagttcac gctggcgatg atgctgaccg gcgtcacccg
     1321 cgtggccgac atcggccgcg cccagctcga acccttgaaa ccctttttgc aggagtcgcc
     1381 atgaacggcg cagccgcctt gatgaaaacg ctcgccgatg cgggcgtgga agtgtgcttc
     1441 accaaccccg gcaccagcga gatgcacttc gtcgccgccc tcgacggcga gccgcgcgtg
     1501 cgcgcggtgc tggcgctgtt cgagggcgtg gccaccggcg ccgccgatgg ctacgcgcgc
     1561 atggccggca agccggcggc gacgctgctg cacctgggct gcggactcgg caacggcctc
     1621 gccaacctgc acaacgcgcg caagggccgc gtgccggtgc tgaacatcgt cggcgaccac
     1681 gcgacgtatc acgtgaagta cgacgcgcag ttgcagtccg acatcgagac cgtcgcgcgc
     1741 aacgtgtcgc cgggtttcgt gcgcacctcg gcgagcagcg cgaacctgtg cggcgacgcg
     1801 ctggatgcgc tggccgccgc gcgcggcctg ccgggccagg ttgccacgct gatcctgccg
     1861 gccgacgtct cgtggggcga gggtgccgag ccgtgcccgc cgcctgatgc aagtgtggcg
     1921 cctgctgccg acgctgccgc ggtggctgcg gtcgccgccg tattgcacga cggtgagccg
     1981 actgcgttgt tgcttggcgg ccacgcgctg cgcgaggcgc cgctgcgcga tgcggcgcgg
     2041 ctggcgcagc gctgcggcgt caagctgttc gccgaggtgt tcccgacccg gctcgaacgc
     2101 ggcgccggcg tgccggccgt cgagcgcatc gcctatctcg ccgagatggc cggcgtgcag
     2161 ctcgcgcctt acaagcacct ggtgctggtg gacgcgaagt cgccggtgtc gttcttcgcc
     2221 tatcccggca aggccagcga cctcgtgcca ccgggctgca ccgtgcacac gctttcgacg
     2281 ccggccgaag atgccgccgc cagcctcgca aaactggttg ccgcgctggg cgcgggcgac
     2341 gtcgagcccg cggtgcaggc gccgttgcga cccggtcgcc cacgcgggcg gctgaccgcg
     2401 ccgaaggtgt gcaaggccgt ggggcacttg ttgcccgagc gggcgatcgt ggtcgacgag
     2461 tcgatcacct cgggcctgat gcttggcgtg atgacgcagg gcgcgccgcg gcacgacctg
     2521 ctgacgctga ctggcggcgc gatcgggcag ggcctaccga acgcggtcgg cgcggcgatg
     2581 gcctgtctcg atcggccggt gatcgcgctg gtgggcgacg gcgccgcgat gtacaccatc
     2641 caggcgctgt ggacgatggc gcgcgagcgc ctgcacgtga tcgccatcgt gttcaacaac
     2701 gcgagctatt cggtgctcaa cgtggagctg gaccgcgtcg gctccggcac gccgggcccg
     2761 aaggcgcgcg gccagctgga actcggcggc gcgccgctcg acttcgtcgc gctcgcccgc
     2821 ggcatgggcg tggccggcac gcgcgtggat cgcgctgagg cgttctgcac cgcgttcgag
     2881 cacgcgctga aaacccctgg cccgcacctg atcgaggcgt gcatccccga ggcgctcggc
     2941 ggcatgaagc gccgcctgct gccgtggctg ctgcgctcgc tgccgagcct gccggcaccg
     3001 gtggcgcagg cgctcaagcg caagcttgcg ccgtgatggt cg
//
LOCUS       DASSVL010000545         2927 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_12682, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000545 DASSVL010000000
VERSION     DASSVL010000545.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2927)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2927)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2927
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_12682"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2023)
                     /locus_tag="VFM52_09570"
     CDS             complement(<1..2023)
                     /locus_tag="VFM52_09570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017463001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HET8765456.1"
                     /translation="MSELATGTARQPSLINRIVAFALAQRLLVVLLTALVAGAGMWAL
                     KRLPMDAYPDLSPPMVEIITQWPGHSAEEVERLITIPVELAMNGIPKLAVKRSISLYG
                     LSDVTLTFADGTDNYWARQRVFNRLPGITLPTGVAPSISPLSSPSGLIYRYVLTSTDR
                     SPMELKTLEDWVIAPQYRSVPGVADDSAFGGGDMQYQVVLDPTKLAAHGLSVAQVEAA
                     IGANNGNAGGGFYTQGDQFFYVRGLGRIKTTQDIGNIVLAVHDGTPTLVKDVGTVRIG
                     MAPRLGEFGYMGNDDAVEGVILMLTGEKTQDVLRRVEAETRELNAHVLPPDVKIHPFY
                     DLSDLIAQTTHVVERNLLLGMALVILVLVFFLYDVRAGLIVATTIPLALLFAFVCIQL
                     QGASANLLSIGAVDFGILVDGAIFMVENVFRELAKRHGMPYDIREVIRAAASEVDRPL
                     VYAVAVIVASFLPIYVLTGPSGTLFKPMADTMIFALVGSLLVTLTLLPVLCALCMRKG
                     VRERRNRLFEKILAAYTRWLDRCLAARWRSVLVPAALLGLAMLLVPRIGAEFMPKLDE
                     GALWVRATMPYTISFQKAAEITPKIRAVLRSFPVVTTVTSELGRPDDGTDSTGFFNVE
                     FFVGLKPYSQWGAQYPSKQALIDAIDRKLRALPGIDFNYPQPAEDAVDEA"
     gene            complement(2020..>2927)
                     /locus_tag="VFM52_09575"
     CDS             complement(2020..>2927)
                     /locus_tag="VFM52_09575"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HET8765457.1"
                     /translation="TVLAPFSGPVVKVLVALGDRVKAGQPLASVASPDYASAVEAYRK
                     TLAAARASAQLAATDKDLFAHQAISQRENTQAQSDAVGAAADRNAARAALVAMQVPPA
                     VLANIERGGSVPSTPGLIRAPLAGTVVERAINPGQQLSAGSTPCFTIADVAQVWVMAQ
                     VYGRDLARVKVGAHARITVDGKSLSGRVTNVSPGVDPDTRAALARVVVDNPAGVLKRH
                     MYVQVQLTSASTRQGLLVPVGAILRDDENLPFVYVRNADGRYARRAVTLGERAGDRYL
                     IAEGLHPGDQVVTEGGIFVRFIQTQ"
BASE COUNT          471 a         1007 c         1015 g          434 t
ORIGIN      
        1 cggcctcgtc gaccgcgtcc tcggccggct gggggtagtt gaagtcgatg cccggcagcg
       61 cgcgcagctt cctgtcgatc gcgtcgatca atgcctgctt gctcgggtat tgcgcgcccc
      121 attgcgaata gggcttgagg ccgacgaaga attccacgtt gaagaacccg gtcgagtcgg
      181 tgccgtcgtc ggggcggccc agctccgagg tcaccgtggt caccaccggg aacgagcgca
      241 gcacggcgcg gatcttcggc gtgatctcgg cggccttctg gaacgagatg gtgtacggca
      301 tggtggcgcg cacccacagc gcgccttcgt ccagcttggg catgaactcg gcgccgatgc
      361 gcggcaccag caacatggcc aggccgagca gcgcggcggg cacgagcacg ctgcgccagc
      421 gcgccgccag gcagcggtcc agccagcgcg tgtacgcggc gaggatcttc tcgaacaagc
      481 ggttgcgccg ctcgcgcacg cccttgcgca tgcacagcgc gcacagcacc ggcagcaggg
      541 tgagcgtgac cagcagcgag ccgaccagcg caaagatcat ggtgtcggcc atcggcttga
      601 acagcgtgcc ggacgggccg gtgagcacgt agatcggcag gaagctggcg acgatcaccg
      661 ccaccgcgta gaccagcggg cgatccactt cggaggcagc ggcgcggatc acctcgcgga
      721 tgtcgtaagg catgccgtgc cgcttcgcca gctcacggaa cacgttctcc accatgaaga
      781 tcgcgccgtc cacgaggatg ccgaaatcca ccgcgccgat cgacagcagg ttggccgatg
      841 ctccctgcaa ctggatgcac acgaacgcga acagcagcgc gagcggaatc gtggtggcga
      901 cgatcagccc cgcgcgcacg tcgtacagga aaaacaccag caccaggatc accagcgcca
      961 tgcccagcag caggttgcgc tcgaccacgt gcgtggtctg cgcgatcaag tcgctgaggt
     1021 cgtagaacgg gtggatcttc acgtcgggcg gcaatacgtg ggcgttgagc tcgcgggttt
     1081 ccgcctccac ccggcgcagc acgtcctggg tcttctcgcc ggtgagcatc aggatcacgc
     1141 cttcgacggc gtcgtcgttg cccatgtagc cgaactcgcc gagccgcggc gccatgccga
     1201 tgcgcaccgt gccgacatcc ttgaccaggg tcggcgtgcc gtcatgcacg gcgagcacga
     1261 tgttgccgat gtcctgcgtg gtcttgatcc ggccgaggcc gcgcacgtag aagaactggt
     1321 cgccctgggt gtagaagccg ccgcccgcgt tgccgttgtt ggcgccgatg gcggcctcga
     1381 cctgtgccac cgacaggccg tgcgcggcga gcttcgtcgg gtcgagcacc acctggtact
     1441 gcatgtcgcc gccgccaaac gcggagtcgt cggccacgcc cggcaccgag cggtactgcg
     1501 gcgcgatcac ccagtcctcc agcgtcttca gctccatcgg cgagcggtcg gtgctggtca
     1561 gcacgtagcg gtagatcagc cccgacggcg aggacagcgg cgagatggat ggcgccacgc
     1621 cggtcggcag ggtgatgccg ggcaggcggt tgaacacgcg ctgccgcgcc cagtaattgt
     1681 cggtgccgtc ggcgaacgtg agcgtcacat cggacagccc gtacagcgag atcgagcgct
     1741 tcaccgccag cttggggatg ccgttcatcg ccagctcgac cggtatcgtg atcagccgct
     1801 cgacctcctc ggcggagtgt cccggccact gggtgatgat ctccaccatc ggcggcgaga
     1861 gatcggggta ggcgtccatc ggcaggcgct tcagtgccca catgccggca ccggcgacca
     1921 gcgccgtgag cagcacgacc agcaggcgct gcgccagcgc gaaggcgacg atgcggttga
     1981 tgagcgacgg ctggcgcgcc gtcccggtgg ccagctcgct cattgggtct ggatgaaacg
     2041 cacgaagatg ccgccctcgg tcacgacctg gtcgccggga tgcaggccct cggcgatcag
     2101 gtagcggtcg ccggcgcgtt cgcccagtgt caccgcgcgc cgcgcgtagc ggccgtcggc
     2161 gttgcgcacg tacacgaacg gcaggttctc gtcgtcgcgc aggatcgccc cgaccggcac
     2221 cagcaaaccc tgccgcgtcg acgccgaggt cagttgcacc tgcacgtaca tgtgccgctt
     2281 gagcacgccc gccgggttgt cgacgacgac gcgggccagc gccgcacgcg tgtcgggatc
     2341 gacgcccggc gagacgttgg tgacgcggcc gctcaacgac ttgccgtcga cggtgatgcg
     2401 cgcgtgggcg ccgaccttca cccgggcgag gtcgcggcca tagacctgcg ccatcaccca
     2461 cacctgcgcg acgtcggcga tggtgaagca cggcgtgctg ccggcggaca gctgctgccc
     2521 cgggttgatc gcgcgctcga cgacggtacc ggccagcggt gcgcggatga ggcctggcgt
     2581 cgacgggacc gatcctccgc gctcgatgtt cgccagcacc gcgggtggca cctgcatcgc
     2641 gaccagcgcg gcgcgcgccg cgttgcgatc ggcggcggca cccaccgcgt ccgactgtgc
     2701 ctgcgtgttc tcgcgctgcg agatcgcctg gtgggcgaac agatccttgt cggtggccgc
     2761 aagctgcgcg cttgcccgtg cggcagccaa tgtcttgcgg taagcctcca cggcggacgc
     2821 atagtcgggc gaggcgacgc tcgccagcgg ctgcccggcc ttcacgcgat ccccgagcgc
     2881 aaccagcacc ttgacgaccg gcccggagaa cggcgccagc accgtcg
//
LOCUS       DASSVL010000546         4969 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_252572, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000546 DASSVL010000000
VERSION     DASSVL010000546.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 4969)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4969)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4969
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_252572"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..659)
                     /locus_tag="VFM52_09580"
     CDS             complement(<1..659)
                     /locus_tag="VFM52_09580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015448863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid-binding SYLF domain-containing protein"
                     /protein_id="HET8765458.1"
                     /translation="MFKRPLHRLLLLAVTLLLPVAAAQAEDPPQVRVQNAIEVLNTIE
                     QSPDKSIPSDLLKEARAIAVIPGLLKAGFIFGGRRGEGLISVKRADGTWSDPSFITLT
                     GASVGFQIGVSSTDVVLVFRTQHGVDTIVNGKFTFGVDATAAAGPVGRSASADTDQNM
                     KAEIYSYSRSRGLFAGAAINGGALRIDYDANAEVYGKDITPRRIFEGGVTNVPPGVVK
                     FR"
     gene            779..1768
                     /gene="hemH"
                     /locus_tag="VFM52_09585"
     CDS             779..1768
                     /gene="hemH"
                     /locus_tag="VFM52_09585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014404340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004325 - ferrochelatase activity
                     [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferrochelatase"
                     /protein_id="HET8765459.1"
                     /translation="MPATGVQTAVLLVNLGTPTAPTAAAVRPYLAEFLSDPRVIELPR
                     WQWWPILHGIILRLRPARSAHAYARIWDAQGSPLRWHSEALAQALQAELGDEVRVALA
                     MRYGEPAVAQTIAGLTQGGVRRLLVLPLYPQYSATSIGSVIDAVADAMKALRWPPELR
                     LVNGYHDDAGHIDALATSVERWWAANGRGDKLLISFHGIPQRYARAGDPYPEQCRATA
                     QLLAQRLQLQPNQWTLSFQSRLGREPWLAPYTDATVRKLAADGVKKLDVACPGFAVDC
                     LETLEEIGMQNRDFFLAAGGDALRYIPALNESPAQVASLAALLRRHLGDWLAL"
     gene            1765..2616
                     /locus_tag="VFM52_09590"
     CDS             1765..2616
                     /locus_tag="VFM52_09590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015448865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HET8765460.1"
                     /translation="MSAPRERRIALPHIEVAALEWGDGGAPPLIALHGWLDNAMSFAR
                     VAPHLAECFHVIALDLPGHGASDHLPPGASYHFVDYVRTVIAALDALALPRAALLGHS
                     LGAGVAALVASAVPERIERLWLIEGIGPLGDDGSRTLDRFRGALGKPAPHAATPRTFA
                     SVEEVAAARTRAAGLAAELALPIVQRNLRAVPGGWQWRSDPRLTRPSPVRLAETQVRA
                     LLAGITAPTALLLADPATPYLPHAMMRERAARVPRIQVEVMAGGHHLQLEHPEAVARW
                     LLHATAA"
     gene            complement(2645..2839)
                     /locus_tag="VFM52_09595"
     CDS             complement(2645..2839)
                     /locus_tag="VFM52_09595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007806678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HET8765461.1"
                     /translation="MNNHVRELRGEQGWSQADLAAHLDVSRQTVNAIETGKYDPSLPL
                     AFKIAKLFGRPIEAIFTPGE"
     gene            complement(2836..3447)
                     /locus_tag="VFM52_09600"
     CDS             complement(2836..3447)
                     /locus_tag="VFM52_09600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8765462.1"
                     /translation="MKRLDEKRYEQHVMAAMLAYMAVLLVAFSLVRTATNVPLKAALA
                     LAPVLPVLWLIAVIWRRIRDSDELEQRVHLVALGVATAVTGAATLVGGFLAAGGVIRL
                     DGDVLIWVFPLLIASYGAARSVVARRYGSGGACDEGSALLPWYFAILAVAMAGAAAWA
                     AWRHAGDGAVTAFIVAAVVFLAGALRAWRRRAQAGRLVDRGDA"
     gene            complement(3444..4349)
                     /locus_tag="VFM52_09605"
     CDS             complement(3444..4349)
                     /locus_tag="VFM52_09605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007806682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HET8765463.1"
                     /translation="MTAGMAAALLGSGAAAAAESATTGVVGTLKYQRHGSTGSAVILV
                     PGLQGGPWVWQDTIKHLEKHHVVYAVTLAGFDGMPAPTRQTGLMDQADASLLALITQQ
                     RIDKPVLVGHSLGGTLALRFAGEHAALLAGVVAVDGLPIFPGMERLDPAQRQAMADRM
                     RTQMAGMDSAQFAASALAYMQHVGVIDPALAAQYAPLNARSDVAASAQYAAEDMAADY
                     RPLLKQATLPIIEISPYNAPDFATGPLAMSEAQKAAYYWGLLADAPDARVVSIAPARH
                     FVMLDQPAKFLAVVNDFLQANGAKP"
     gene            complement(4709..>4969)
                     /locus_tag="VFM52_09610"
     CDS             complement(4709..>4969)
                     /locus_tag="VFM52_09610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8765464.1"
                     /translation="RTRSATTATERAGWLSGRLEQIAGQAVDHVTFSVVKKMTARALG
                     RGKFAPSRAGVRAEWVKPRLLGVLRARRVDSGRDTNHHANNN"
BASE COUNT          766 a         1822 c         1627 g          754 t
ORIGIN      
        1 cggaacttca ccacgcccgg cggcacgttg gtgacaccgc cctcgaagat gcggcgtggc
       61 gtgatgtcct tgccatacac ctcggcgttg gcgtcatagt cgatgcgcaa cgcgccaccg
      121 ttgatcgcgg cgccggcgaa caggccgcgc gaacgcgagt aggagtagat ctccgccttc
      181 atgttctggt cggtgtcggc gctggcgctg cgcccgaccg ggccggcggc ggcggtcgcg
      241 tccacgccga aggtgaactt gccgttcacg atggtatcca cgccatgctg ggtgcggaac
      301 accagcacca cgtcggtcga cgacacgccg atctggaagc cgacgctggc gccggtcagg
      361 gtgatgaagc tcgggtcgga ccaggtgccg tcggcgcgct tcaccgagat cagcccctcg
      421 ccgcggcgtc cgccgaagat gaagccggcc ttgagcaggc ccgggatcac cgcgatcgcg
      481 cgcgcctcct tgagcaggtc ggacggaatc gacttgtccg gcgactgctc gatcgtattc
      541 agcacctcga tggcgttctg cacgcgcacc tgcggcgggt cttcggcctg cgccgcggca
      601 accggcagga gcagcgtgac agcaagcagc agcaggcgat gcaagggcct cttgaacatg
      661 ggcaactccg tcatggaagg ggaaacatgc cgcgggcagc gccgccgctt gtggcagact
      721 cgacgccacg atgcctgacc acacccacta taccggcgcc gatgcagcgt ccggcgccat
      781 gccggcaacc ggcgttcaga ctgccgtact gctggtgaac ctcggtaccc cgacggcacc
      841 gaccgccgcc gcggtgcggc cgtatctcgc cgaattcctg tccgatccgc gcgtgatcga
      901 gctgccgcgc tggcagtggt ggccgatcct gcacggcatc atcctgcgct tgcgcccggc
      961 gcgttccgcg catgcctatg cgcgcatctg ggacgctcag ggctcgccgc tgcgctggca
     1021 cagcgaggcg ctggcgcagg cgctgcaggc ggaactgggc gacgaggtgc gcgtcgcgct
     1081 ggcgatgcgc tatggcgagc cggcggtggc gcagaccatc gccggcctca cgcagggcgg
     1141 cgtgcgccgg ctgctggtgc tgccgctgta cccgcagtat tcggccacct cgatcggctc
     1201 ggtgatcgac gccgtcgccg acgcgatgaa ggcgctgcgc tggccgcccg aactgcgcct
     1261 ggtgaacggc taccacgacg acgccggcca catcgacgcg ctggccacca gcgtcgaacg
     1321 ctggtgggcc gcgaacggcc gcggcgacaa gctgctgatc tcgttccacg gcattccgca
     1381 gcgctatgcg cgcgctggcg acccataccc cgagcaatgt cgtgccacgg cgcagctgct
     1441 ggcccagcgg ctgcaactcc agcccaacca gtggacgctg agcttccagt cgcgcctcgg
     1501 ccgcgagccc tggcttgcgc cgtacaccga cgccaccgtg cgcaagctgg ccgccgatgg
     1561 cgtgaagaag ctcgatgtcg cgtgccccgg ctttgccgtg gactgcctgg aaacgctgga
     1621 ggaaatcggc atgcagaacc gcgatttctt cctggccgcc ggcggcgacg cactgcgcta
     1681 catccccgcg ctgaacgaga gcccggccca ggtcgccagc ctcgcggccc tgctgcgccg
     1741 ccacctcggc gactggctcg ccctgtgagc gcgccgcgcg agcggcgcat cgccctgccg
     1801 cacatcgagg ttgccgcgct cgagtggggc gacggcggcg caccgcccct cattgcgctg
     1861 cacggctggc tcgacaacgc gatgagcttt gcgcgcgtcg cgccgcacct ggccgagtgc
     1921 ttccacgtca tcgcgctcga cctgcccggc cacggcgcgt ccgatcacct gccgcccggc
     1981 gcgagctatc acttcgtcga ttacgtgcgc acagtcatcg ccgcgctgga cgcgctcgcg
     2041 ctgccgcgcg cagcgctgct cggccactcg ctcggcgccg gcgtcgcggc gctggtcgcc
     2101 agcgcggtgc ctgagcgcat cgagcgcctg tggctgatcg aaggcatcgg tccgctcggc
     2161 gacgatggct cgcgcacgct cgaccgcttc cgcggcgccc tcggcaagcc ggcaccgcac
     2221 gccgccacgc cgcgcacgtt cgccagcgtg gaagaagtcg ccgccgcacg cacgcgcgcc
     2281 gccggactgg cggccgaact cgcgctgccg atcgtccagc gcaacctgcg cgcggtgccc
     2341 ggcggatggc aatggcgcag tgatccgcgc ctcacccggc caagcccggt gcgcctggcc
     2401 gagacccagg tgcgcgcgct gctcgccggc atcaccgcac caacggcgct gctgctggca
     2461 gacccggcaa cgccctacct gccgcacgcg atgatgcgcg agcgcgcggc gcgcgtgccg
     2521 cgcatccagg tcgaggtgat ggccggcggc caccacctgc agctcgaaca cccggaagcc
     2581 gtggcgcgct ggttgctgca cgccacggct gcctgacgca ccccgtccac cgcgcgacct
     2641 cgcctcactc gcccggcgtg aagatcgcct cgattggacg tccaaacagt ttcgcgatct
     2701 tgaacgccag cggcaggctg ggatcgtact tgccggtctc gatcgcgttc acggtctgcc
     2761 gcgacacatc gagatgcgcg gcgagatcgg cctgcgacca gccctgctcg ccgcgcagtt
     2821 cgcgcacgtg gttgttcatg cgtccccgcg atcgaccagg cgccccgcct gggcacgcct
     2881 gcgccacgcg cgcagcgcgc ccgcgaggaa caccactgcc gcgacgatga acgcagtcac
     2941 ggcgccgtcg ccggcgtggc gccacgcggc ccatgcggcg gcgcccgcca tcgccaccgc
     3001 caggatcgcg aagtaccacg gcaggagtgc gctgccctcg tcgcatgcgc cgcccgatcc
     3061 atagcggcga gccacgacgc tccgcgccgc gccatagctg gcgatcagca gcggaaacac
     3121 ccagatcagc acgtcgccat ccagccggat caccccgccg gcggcgagaa atccgccgac
     3181 cagcgtggcc gcgccggtga ccgcggtggc caccccgagc gccaccaggt gcacgcgctg
     3241 ctccagttcg tcgctgtcgc ggatgcgccg ccagatcacc gcgatcagcc acaacaccgg
     3301 cagcaccggc gccagtgcaa gcgcggcctt gagcggcacg ttggtggcgg tgcgcaccag
     3361 cgagaacgcc accagcagca ccgccatgta cgccagcatc gcggccatca catgctgttc
     3421 gtagcgcttt tcgtcgagtc gcttcatggc ttggctccgt tcgcctggag gaaatcattc
     3481 accacggcga ggaatttcgc cggctggtcg agcatcacga aatgccgcgc cggcgcgatc
     3541 gacaccaccc tggcgtcggg tgcgtcggcc agcaggcccc agtagtacgc cgccttctgc
     3601 gcctcgctca tcgccaacgg cccggtggcg aaatccggcg cgttgtatgg cgagatctcg
     3661 atgatcggca gcgtcgcttg cttgagcagc gggcgatagt ccgccgccat gtcctcggcg
     3721 gcgtattgcg cgctggcggc gacgtcgctg cgcgcgttca gcggcgcgta ctgcgcggcc
     3781 agcgccgggt cgatcacgcc cacatgctgc atgtaggcca aggcggaagc cgcgaactgc
     3841 gcggaatcca tgccggccat ttgcgtgcgc atgcggtccg ccatcgcctg gcgctgcgcg
     3901 ggatcgaggc gttccatgcc ggggaagatc ggcaagccgt ccaccgccac cacgccggca
     3961 agcaaggccg cgtgctcgcc ggcaaagcgc agcgcgagcg tgccacccag gctgtggccg
     4021 accagcaccg gcttgtcgat cctctgctgc gtgatcagcg ccagcagcga ggcgtcggcc
     4081 tgatccatca ggccggtctg gcgcgtcggc gccggcatgc cgtcgaagcc ggcgagcgtc
     4141 accgcgtaca ccacgtggtg cttttccagg tgcttgatgg tgtcctgcca cacccacggc
     4201 ccgccctgca ggccggggac caggatcacc gcgctgccgg tgctgccgtg gcgctggtac
     4261 ttgagcgtcc cgaccacgcc ggttgtggca ctttccgctg ccgcggcggc gccgctgccg
     4321 agcaaggccg cggccattcc ggccgtcatc aggatccgat gccatcgttg tccgccgtgc
     4381 atggttcgct cctcgcgtcg tgtaaagcta acttgacacg aacggtagcg ttggcatggg
     4441 tgtagtgtca agcgaacttg acacatcacc cggagttccc gatgaacgag atggcacacg
     4501 tttgaccgga acgccccgta aagcgtgtcg ccgctcacaa aacggcacga cgacaccgta
     4561 tcgttgggtc actttctgac gaaaagcggc catcgccagc tttcacactc cgtcgacgtc
     4621 agcttcacga cgtctccgat gccggctttc atccctgcga aaaagtgtga tttatctctc
     4681 agttcggacc aaccacgccg aacaaacgtc agttgttgtt cgcgtgatgg ttcgtatcgc
     4741 gacctgagtc cacacggcgt gcgcgcagca cgcccaataa ccgtggcttg acccattcag
     4801 cccgtactcc agcgcgcgaa ggggcgaact tcccacgacc caaggcccgc gccgtcattt
     4861 ttttgacgac tgaaaacgtg acgtggtcga ccgcctggcc cgcaatttgc tccaaccgac
     4921 ccgacagcca gccagcccgc tccgttgcag tggtggcact gcgcgtccg
//
LOCUS       DASSVL010000547         3280 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1354609,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000547 DASSVL010000000
VERSION     DASSVL010000547.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3280)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3280)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3280
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1354609"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..613)
                     /locus_tag="VFM52_09615"
     CDS             complement(<1..613)
                     /locus_tag="VFM52_09615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008212679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HET8765465.1"
                     /translation="MSSAVRSTDPIGATLVFSLLVHGVLLLGITFHFAKPTPDLPTLD
                     VTLVNVANREAPEKADFLAQANNRGGGTSDHAARPSQPFSGALPKPTPGTAPQSVAAA
                     APQPQPVTAERLVTTSSGSPQHVDSDTAHPAVPPTDAPDASDTRRQQEMAQLAAELRS
                     QTEAYAKRPRKKFISASTREYVYAAYMRGWSDRVQRVGNLNYPV"
     gene            complement(610..1572)
                     /gene="gshB"
                     /locus_tag="VFM52_09620"
     CDS             complement(610..1572)
                     /gene="gshB"
                     /locus_tag="VFM52_09620"
                     /EC_number="6.3.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014403694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004363 - glutathione synthase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006750 - glutathione biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione synthase"
                     /protein_id="HET8765466.1"
                     /translation="MSLSVAVLMDPIGAIKPVKDTSLAMLLEAQRRGHVLFYMEQGDL
                     ALRGDAPWARLAPLTVRDDAHDWYTLGVPAWRDLREMNVVLMRKDPPVDPQFIYDTIV
                     LEAAQRGGVNVVNDPRALRDCNEKLFALEFPQCIAPTLVSRDPHELRRFVTECGEAVL
                     KPLDGMGGRGIFKVKAGDGNLNSMLETLLAGGPHGENRHFTIAQKYIPAISAGDKRIL
                     VIDGEPVPYALARIPQGDEFRGNLAAGGRGEGVPLSERDRWIAAQVAPELRKRGLRFV
                     GLDVIGDWLTEINVTSPTCARELDHQFGLNIAGLLFDAIENAAP"
     gene            1901..2311
                     /locus_tag="VFM52_09625"
     CDS             1901..2311
                     /locus_tag="VFM52_09625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005913706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HET8765467.1"
                     /translation="MNLNANANGLAGLRVMVIDDSKTIRRTAETLLKKEGCEVLTAVD
                     GFEALAKIADQKPAVIFVDIMMPRLDGYQTCALIKNNPQFRATPVIMLSSKDGLFDKA
                     RGRVVGAEQYVTKPFTRDELLGAIHQHVGAAIAG"
     gene            2335..2706
                     /locus_tag="VFM52_09630"
     CDS             2335..2706
                     /locus_tag="VFM52_09630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007079997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HET8765468.1"
                     /translation="MANILIIDDSPTDVRVLTTMLERAGHTVDAVGTAEDGIERVRAT
                     PPQLVIMDVIMPGMNGFQATRTLTRDPATAGVPIVMITTKSMETDRVWGLRQGARAFI
                     TKPVNETELVACINQLLAGAA"
     gene            2703..3245
                     /locus_tag="VFM52_09635"
     CDS             2703..3245
                     /locus_tag="VFM52_09635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017462745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheW"
                     /protein_id="HET8765469.1"
                     /translation="MSGASAATPFEVLARYERLSLAHASDTRNELDAPGLWRGIGYRV
                     GTRLLASEIGEINELLALPPLAAIPGAQPWLLGIANVRGNLMPVIDFARYLFDQRTAV
                     TDRTRLLVVRQGGGNVALLVDEVFGQRTVDAEQWQGAVPEDDARLARFAERRVGYDQP
                     LAILSMERLVQAADFRQAAA"
BASE COUNT          499 a         1061 c         1179 g          541 t
ORIGIN      
        1 ccaccgggta attcaggttg ccgacgcgct gcacgcggtc cgaccagccg cgcatgtagg
       61 cggcgtagac gtattcccgg gtgctggccg agatgaactt cttgcgcggg cgcttggcgt
      121 aggcctcggt ctggctgcgc agctcggccg cgagctgggc catttcctgc tggcgtctgg
      181 tgtcgctggc gtcgggtgcg tcggtaggcg gcaccgcggg gtgcgcagtg tcgctgtcca
      241 cgtgttgcgg gctgccgctg ctggtggtga ccaggcgttc cgcggtgacc ggctgcggct
      301 gcggcgccgc tgccgccacc gattgcggcg cggtgcctgg cgtcggcttc ggcagggcgc
      361 cggaaaacgg ctgcgagggg cgcgcggcgt ggtcgctggt gccgccgccg cggttgttgg
      421 cctgcgcaag gaaatccgcc ttctccggcg cctcgcggtt cgcgacgttg accagggtga
      481 cgtcgagcgt cggcaggtcc ggcgtgggct tggcgaagtg gaaggtgatg ccaagcagca
      541 gtacgccgtg caccagcagc gaaaacacca gggtggcgcc gatcgggtcg gtggagcgta
      601 cggcggaact cacggagcgg cgttctcgat ggcatcgaac agcaggccgg cgatattaag
      661 gccgaactgg tggtccagtt cgcgggcaca ggtcggcgat gtgacgttga tctcggtcag
      721 ccagtcgccg atcacgtcga ggccgacgaa gcgcaggccg cgcttgcgca actccggggc
      781 cacctgtgcg gcgatccagc gatcgcgctc ggacagcggc acgccttcgc cgcggccgcc
      841 ggcggcgagg ttgccgcgga actcgtcgcc ctgcgggatg cgcgccagcg cgtacggcac
      901 cggctcgccg tcgatcacca ggatgcgctt gtcgccggcg ctgatcgccg ggatgtactt
      961 ctgcgcgatg gtgaagtgtc ggttctcgcc gtgcggcccg ccggcgagca gggtttccag
     1021 catcgagttc aggttgccgt cgccggcctt gaccttgaag atgccgcgcc cgcccatgcc
     1081 gtccagcggc ttcagcacgg cctcgccgca ttcggtgacg aagcggcgca actcgtgcgg
     1141 gtcgcgcgac accagcgtgg gcgcgatgca ctgcggaaat tccagcgcga acagcttctc
     1201 gttgcagtcg cgcagcgcgc gcgggtcgtt caccacgttc acgccgccgc gctgcgcggc
     1261 ttcgagcacg atggtgtcgt agatgaattg cgggtcgacc ggcggatcct tgcgcatcaa
     1321 caccacgttc atctcgcgca ggtcgcgcca ggccggcacg ccgagcgtgt accagtcgtg
     1381 cgcatcgtcg cgcacggtga gcggcgcgag gcgtgcccac ggcgcatcgc cgcgcagcgc
     1441 aagatccccc tgttccatgt agaacaggac gtggccgcga cgctgcgctt cgagcagcat
     1501 cgccaggctg gtgtccttga ccggcttgat tgcgccgatg ggatccatca gcaccgcgac
     1561 cgacaggctc atcgtggttc tccttgagac ggggcgcggc gccacgcacg cgtcgcgaag
     1621 gcgtcgatgt tcgtccagcc cggccacgcc gacaagcgca gatgcggcgt gccgccaggg
     1681 gttcaacctt gccgcggtga gtcacatcgt gcgcgatccg gcggtgattc ggcttgacgg
     1741 gataccgggc aggcggtaaa caacgaacct cgtacagccc gtcgcagagc gggttgcagt
     1801 ggctacaagt tgtggttggt tttgtcatgc acactggcgg catgcttgtt gcctgtcctt
     1861 gtgactgtcc tgggcccggt ttgggtgaca gggggggaga atgaacctga acgcgaatgc
     1921 gaatggtctg gccggcttgc gggtcatggt gatcgatgac tccaagacca tccgccgcac
     1981 agcggagacg ctgctgaaga aggagggctg cgaggttctc accgccgtcg acggcttcga
     2041 ggcgctggcg aagatcgccg accagaaacc cgcggtcatc ttcgtcgaca tcatgatgcc
     2101 gcgcctggat gggtatcaga cctgcgcgct gatcaagaac aacccgcagt tccgcgccac
     2161 gccggtcatc atgctcagct cgaaggacgg gctgttcgac aaggcgcgcg gccgcgtggt
     2221 cggtgccgag caatacgtca ccaaaccgtt cactcgcgac gagctgctcg gcgcgatcca
     2281 tcaacacgtc ggcgccgcga tcgcgggctg accacagatt cttcaggggg atccgtggcg
     2341 aacatactca tcatcgacga ctcgccgacc gacgtgcggg tcttgaccac catgctggag
     2401 cgcgccggcc acacggtcga tgcggtcggc accgccgagg acggcatcga acgcgtgcgc
     2461 gcgacgccgc cgcagctggt catcatggac gtcatcatgc ccggcatgaa cggcttccag
     2521 gcgacgcgca cgctgacccg cgatcccgcc accgctggcg tgccgatcgt gatgatcacc
     2581 accaagtcga tggaaaccga ccgcgtgtgg gggctgcgcc agggggctcg cgcgttcatc
     2641 accaagccgg tgaacgagac cgagctggtg gcctgcatca accagttgct cgcgggcgcg
     2701 gcatgagcgg ggcgtccgcc gccacgccgt tcgaggtgct ggcgcgctac gagcggttgt
     2761 cgctggcgca cgcctcggac acgcgcaacg agctggacgc accgggtctg tggcgcggca
     2821 tcggctatcg cgtcggcacg cgcctgctgg ccagcgagat cggcgaaatc aacgaactcc
     2881 tggcactgcc gccgctggcg gcgatcccgg gcgcgcagcc gtggctgctg ggcatcgcca
     2941 acgtgcgcgg caacctgatg ccggtgatcg attttgcgcg ctacctgttc gaccagcgca
     3001 ccgcggtcac cgatcgcacg cgcctgctgg tggtgcgcca gggcggcggc aatgtggcgt
     3061 tgctggtcga cgaggtgttc ggccagcgta cggtggacgc ggaacagtgg cagggggcgg
     3121 tgcccgagga cgatgcgcgg ctggcccggt tcgccgaacg gcgggtgggg tacgaccagc
     3181 cgctggcgat cctcagcatg gaacggctgg tgcaggccgc ggattttcgc caggccgccg
     3241 cgtaaggcgg ccccgggatt atccgggcca ggatccattc
//
LOCUS       DASSVL010000548         2851 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_153976, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000548 DASSVL010000000
VERSION     DASSVL010000548.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2851)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2851)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2851
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_153976"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            383..1315
                     /locus_tag="VFM52_09640"
     CDS             383..1315
                     /locus_tag="VFM52_09640"
                     /inference="COORDINATES: protein motif:HMM:NF025007.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin-like domain-containing protein"
                     /protein_id="HET8765470.1"
                     /translation="MHEWTGIEVDWGAFDPWKVQPVHHGLATHPLLQLDSLVALGRRL
                     ERLRSVRTHSNQVSAGTPFNHAPRLHPNDAGAAATLADIAHAKAWMSLLNVQADPTYR
                     TLVDDVLNAVAAQIARRDPGLCYRGGWIFLTSPHTVTPFHFDKEHNFILQLQGHKTIY
                     VWDPQDTEAASEAARDLFHATHSRDRLEWREALRERAHVFHVEPGMGVYMPSTSPHLV
                     ETSDGPSVTMSFTYYTDATRRDAVLHRAHERLRQWGHEPPPVGANAALDAALLAAFRS
                     STWLRQLASRLTGATTPAPDRTPYALAPYERLVA"
     gene            1312..>2851
                     /locus_tag="VFM52_09645"
     CDS             1312..>2851
                     /locus_tag="VFM52_09645"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HET8765471.1"
                     /translation="MTPRLAATQRDAPSSLLDVLPRASGTGVKVDTLPLDVALVAALD
                     ARAMQVGVTVHALRDAALALLESRLTGNGDVTLRSADGTVRSVSVPAAAAVADWLRAP
                     ATPAPGAGPGAIGAWQAAPGEGVSFAWSVAGAGTQQVLRLARDASVIGDVAAGILLSG
                     MHRVLQGLAEASTLAQITIVDVRDDERIARWNATTVARDAGETVHGLFAAMARQRPDA
                     PALAWGGGTMSYAELDARSSRVAGGLAAHGVASGELVALLLPRSASAVVAMLGVLKAG
                     AAYLPLDPRDPPARLAQLVADAGAVLVIDADPDQPRPGITLPRVEPGTLTRASPVQPA
                     AGMTGDVLAYVMFTSGSTGTPKGVEIAHRGVLRLVRGISYVCLDASSRVLHAAPLGFD
                     ASTFEVWAPLLNGGTCVIHDERVPTAAGLAATIAHHRVDTAWLTAALFNAVVDADVTA
                     LGGLRQLLIGGEALSPAHVRRALVALPATRLINGYGPTECAVTATHTVVRPGDPITIG
                     RLIHG"
BASE COUNT          392 a          985 c         1035 g          439 t
ORIGIN      
        1 ggctgcggag cgcggtggtc gggtttgccc atccggcgac gtgcaacacg catacctccc
       61 cccttggcga atggcgcccc gcaggccggt ggctgcgtcg acgggtctgt cgtggccgtg
      121 cggtatagga tgccagaaaa atgtgacggg catcacagtt ttgccgcata cttgggtcgg
      181 ccttaggcca gcgtgcgatg ggccgcgata gctccgctcg gggcaagccc ttgtgctgga
      241 agacgccgga caggggctcg cctgcgcgca gggaacgatg ccggcgtgcc ggtagcgaca
      301 cgagtggatc gtcggcgcgc ggtgtctcgg cgcggacgac gaggcgacgc aggtgcggtg
      361 atacgcgaca gggggcgaca tgatgcacga atggactggc atcgaagtgg attggggcgc
      421 gttcgatccg tggaaagtgc agccggtgca ccacgggctg gccacgcacc cgttgctgca
      481 actggattcg ctggtggcgc ttggccgccg ccttgagcgg ttgcgcagcg tgcgcacgca
      541 cagcaaccag gtgtcggcgg gcactccgtt caaccacgca ccgcggctgc atccaaacga
      601 tgccggagca gcagcgacgc tggccgacat cgcgcacgcc aaggcgtgga tgtcgctcct
      661 gaacgtgcag gccgacccca cctaccgcac cctggtggac gacgtgctca atgcggtcgc
      721 tgcgcagatc gcacggcgcg accccggcct gtgctatcgc ggtggctgga ttttcctcac
      781 ctcgccgcac acggtcacgc cgttccattt cgacaaggag cacaacttca tcctgcagct
      841 gcaggggcac aagaccatct acgtgtggga cccgcaggac accgaagccg cgagcgaggc
      901 ggcgcgcgac ctgttccacg cgacccacag ccgcgaccgc ctcgagtggc gcgaagcgct
      961 gcgcgagcgc gcccacgtgt tccacgtcga gcccggcatg ggcgtgtaca tgccctcgac
     1021 cagcccgcac ttggtcgaga ccagcgacgg cccgtcggtg accatgagct tcacctacta
     1081 caccgacgcc acgcgccgcg atgccgtgct gcatcgcgcg cacgagcggc tgcggcagtg
     1141 ggggcatgag ccgccgccgg tcggggccaa cgcggcgctg gatgccgccc tgctggccgc
     1201 gttccgatcg tcgacgtggt tgcggcagtt ggcctcccgc ctcaccgggg cgacgacgcc
     1261 ggcccccgac aggactccct acgcgctggc tccgtacgag cggctggttg catgacgccc
     1321 cgccttgccg ccacgcagcg cgacgcgcca tcgagcctgc tcgatgtctt gccgcgcgcg
     1381 tccggcacgg gggtgaaagt cgacacgttg ccgctcgacg tggcgctggt cgccgcgctc
     1441 gatgcgcgtg ccatgcaggt cggggtgaca gttcacgcgt tgcgcgatgc ggcactcgca
     1501 ctgcttgagt cccgcctcac cggcaatggg gacgtcacgc ttcgctcggc ggatggcacg
     1561 gtgcgcagcg tgtcggtgcc ggccgcggcg gcggttgccg actggctgcg tgcaccggcc
     1621 acgcccgcac ccggtgccgg ccctggcgcg atcggcgcat ggcaggccgc gccaggcgaa
     1681 ggcgtttcgt tcgcgtggtc ggtggctggc gcgggcacgc agcaagtgct gcgcctggct
     1741 cgcgatgcca gcgtgatcgg cgatgtggcg gccggcatcc tgttgtccgg catgcatcgc
     1801 gtgctgcagg ggctggcgga ggcctcgacg ctggcccaga tcacgattgt cgatgtgcgg
     1861 gacgacgaac ggatcgcccg gtggaacgcg acaacggtgg cgcgcgatgc aggcgaaacc
     1921 gtgcacggcc tgttcgccgc gatggcgcgc cagcgccccg atgcgccggc gctggcgtgg
     1981 ggcggtggca ccatgagtta tgccgagctc gacgcgcgct cgtcgcgcgt cgccggcggg
     2041 ctggcggcac acggggtggc aagcggcgag ctggtggcct tgttgctgcc gcgatccgcg
     2101 tccgcagtgg tcgccatgct cggtgtgttg aaggccgggg cggcctatct cccgcttgat
     2161 ccgcgcgacc cgccggcgcg gctggcgcag ctcgtcgcgg atgccggcgc ggtgctggtg
     2221 atcgacgccg acccggacca gccgcgaccc ggcatcacgc tgccccgggt ggaaccggga
     2281 accctgacgc gggcctcgcc tgtgcagccc gccgccggga tgacgggcga cgtgctggcc
     2341 tacgtgatgt tcacctcggg ctccaccggc acgccgaaag gcgtcgagat cgcgcatcgc
     2401 ggcgtcctgc ggctggtgcg cggcatctcg tatgtgtgcc tcgacgcatc gtcgcgcgtg
     2461 ctgcatgcgg cgccgctcgg cttcgacgcg tccaccttcg aggtctgggc gccgctgctc
     2521 aacggcggca cctgcgtgat ccacgacgag cgcgtgccca ccgcggccgg tttggccgcc
     2581 accatcgccc accaccgggt cgacacggcc tggcttaccg cggcgttgtt caacgcggtc
     2641 gtcgatgcgg atgtcacggc gcttggcggc ctgcgccagt tgctgatcgg cggcgaggcg
     2701 ttgtcgcccg cgcacgtgcg gcgggcgctg gtggcactgc cggccaccag gttgatcaat
     2761 ggctacgggc cgaccgaatg cgcggtgact gcgacgcaca ccgtcgtccg accgggcgac
     2821 ccgatcacga tcggcaggct cattcacggc c
//
LOCUS       DASSVL010000549         2862 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_110860, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000549 DASSVL010000000
VERSION     DASSVL010000549.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2862)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2862)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2862
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_110860"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2189)
                     /locus_tag="VFM52_09650"
     CDS             complement(<1..2189)
                     /locus_tag="VFM52_09650"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007511533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HET8765472.1"
                     /translation="MGEACVALDTQWRYTYVNAAAAAILGRCAEDLLGKHIWTEFPGE
                     GRKPFRAAYEHAVATQQSGTVEIWSTQFGAWYESTLYPAPDGLTVFFREVTARKREER
                     RLRAQQKAMDQAQELAQVGNWSWDVTTNAVEWSAELYRIYAIDPAQHAATFEGYLERL
                     HPDDRTRVRQVIERALATASPFAFEERIVRPDGEQRVLSSRGMVETDGAGHVVRLLGA
                     CQDITARKHDERMASGQHEILLGIAAQRPLAESLERIALLHEALNPGALCSLLRLDAD
                     GRHVLHGAAPSLPAAFNHAIDGQEIGDARGSCGTAAWRGERVIVADIAQHPYWAAYRD
                     VALAHGLCACWSAPVRGSHGEVLGTFAVYYREVRVPRPEELDSIDRMLPLAGIALESE
                     RLLGQLRERNQFFEMSQELFCILDPARERMVQFNPFVQRLTGYRADEIKARSYREFLK
                     PLVDSGASSAIPDDIRPGRATGFVNRCVARDGREHLLEWTAYATPDHLLYAVARDVTA
                     RRAAETLLLEAATHDVITGLPRRSMLEDTVGDLLAASEAAVWVWVIGLDRFQVVNESV
                     GHVIGDDVLRRVAGRLRSALDASWPLARVTGDRFAAAATGLDRVAALAVAQRLRDVVA
                     RPIEGDDYRLLLTASVGVSHSPAHGDTPGALLRGAEAALILAKHDGRDRVAEFTIAQG
                     HALDERVALGRHLRDAVRRNELELYYQPQHNALDHSLTGFEALLRWN"
     gene            complement(2318..>2862)
                     /locus_tag="VFM52_09655"
     CDS             complement(2318..>2862)
                     /locus_tag="VFM52_09655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013534794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HET8765473.1"
                     /translation="SIGCDNFAGGRLATAHLLAQGCRHIAFLGDATPHYPEFHERYRG
                     YAAALADARLAVDPALQADAETTERAGYEAAELLIERGVAFDAVFAASDLIAIGALRA
                     LAEHGLAVPRDVALAGFDDIPMASFVNPALTTVRQDTGKAGEILVDQLLREIRGEPAA
                     SAMLPAELKVRASSVRRGVS"
BASE COUNT          398 a         1037 c         1012 g          415 t
ORIGIN      
        1 ctgttccagc gcagcagcgc ctcgaaaccg gtcagcgaat ggtcgagcgc gttgtgctgc
       61 ggctggtagt acagctccag ctcgttgcgg cgcaccgcat cgcgcaggtg gcggccgagc
      121 gccacgcgct catccagcgc atggccctgc gcgatggtga actcggcaac ccggtcgcgg
      181 ccatcgtgct tggcaaggat cagcgccgcc tcggcaccgc gcagcagcgc gcccggcgtg
      241 tcgccgtgcg ccggcgaatg actgacgccg acgctggcgg tcagcagcag gcggtaatcg
      301 tcgccttcga tcggccgcgc caccacgtcg cgcaagcgct gggcgacggc cagcgcggcc
      361 acgcgatcaa ggccggtcgc cgccgcagcg aaccggtcgc cggtgacccg cgccagcggc
      421 cagctcgcgt cgagcgcgct gcgcaggcgt ccggcgacgc ggcgcagcac gtcgtcgccg
      481 atcacgtggc cgaccgattc gttgaccacc tggaaccggt ccagcccgat cacccacacc
      541 cagaccgcgg cctcgctggc ggcgagcagg tcgccgaccg tgtcctccag catgctccgc
      601 cgcggcaagc cggtgatgac gtcgtgggtg gcggcctcca gcagcagggt ctcggcggcg
      661 cgccgcgcgg taacgtcgcg cgccaccgcg tacaacaggt ggtccggggt cgcatacgcg
      721 gtccactcga gcaggtgctc ccgcccgtcg cgtgccacac agcggttgac gaagccggtg
      781 gcgcgccccg gccggatgtc gtcggggatc gcggacgacg cgccgctgtc caccagcggc
      841 ttgaggaatt cccgatagct gcgtgccttg atctcgtcgg cgcgatagcc ggtcaggcgt
      901 tgcacgaagg gattgaattg caccatccgc tcgcgcgccg gatcgaggat gcagaacagc
      961 tcctgcgaca tctcgaagaa ctggttgcgc tcgcgcagct ggccgagcag gcgctcgctc
     1021 tccagtgcga tgccggccag cggcagcatg cggtcgatgc tgtcgagctc ctccggccgc
     1081 ggcacgcgca cctcgcggta gtacaccgca aaggtgccga gcacctcgcc gtggctgccg
     1141 cgcaccggcg ccgaccagca cgcgcacagg ccatgcgcca gcgcgacgtc ccggtacgcg
     1201 gcccagtacg ggtgctgcgc gatgtcggcg acgatcaccc gctcgccgcg ccacgcggcg
     1261 gtgccgcagg agccgcgcgc atcgccgatc tcctggccat cgatggcgtg attgaacgcg
     1321 gcaggcaggc tcggcgccgc gccgtgcagc acgtgccggc catcggcgtc cagccgcagc
     1381 agcgagcaca gcgcgccggg attcagcgcc tcgtgcagca acgcgatgcg ttcgaggctt
     1441 tcggccagcg ggcgctgcgc ggcgatgccg agcaggatct cgtgctggcc gctggccatg
     1501 cgctcgtcgt gcttgcgcgc ggtgatgtcc tggcaggcgc cgagcaggcg caccacgtgg
     1561 ccggcgccat cggtttccac catgccgcgg ctggacagca cgcgctgctc gccatccggg
     1621 cgcacgatgc gctcctcgaa cgcgaacggg ctcgccgtcg ccagcgcacg ctcgatcacc
     1681 tggcggacgc gcgtgcggtc atccgggtgc aggcgttcga gataaccctc gaacgtggcc
     1741 gcgtgctgcg cgggatcgat cgcgtagatg cggtacaact cggccgacca ctcgacggcg
     1801 ttggtggtca cgtcccagct ccagttgccg acctgggcca gctcctgggc ctggtccatc
     1861 gccttctgct gcgcgcgcag ccggcgctcc tcgcgcttgc gcgcggtgac ttcgcggaaa
     1921 aacacggtga gcccgtccgg cgccgggtac agcgtgcttt cgtaccaggc gccgaactgc
     1981 gtcgaccaga tttcgacggt gccggattgc tgcgtcgcta ccgcgtgctc gtacgcggcg
     2041 cggaacggct tgcggccttc gcccgggaat tcggtccaga tgtgcttgcc cagcaggtct
     2101 tcggcgcacc ggccgaggat ggccgccgct gcggcgttga cgtaggtgta gcgccattgc
     2161 gtgtccagcg cgacgcacgc ctcgcccacg cgggcgagtg cttgttccgc tgccgacttt
     2221 gcacgctctg gttccatggc catgctgcaa cgacgcgctt tggcacggga cgccagcgta
     2281 tgccgccgcc gggcgtgctg caatgtgaac gcggcgtcta ggaaacgccg cggcgcacgc
     2341 tcgacgcgcg caccttgagc tcggccggca gcatggcgct ggcggccggt tcgccgcgga
     2401 tctcgcgcag cagctggtcg acgaggatct cgccggcctt gccggtgtcc tggcgcacgg
     2461 tggtcagcgc cgggttgacg aaactcgcca tcgggatgtc gtcgaagccc gccagcgcca
     2521 cgtcgcgcgg caccgccagg ccgtgctcgg ccagcgcgcg cagcgcgccg atcgcgatca
     2581 ggtcgctggc cgcaaacacc gcgtcgaacg ccacgccgcg ctcgatcagg agttccgccg
     2641 cctcgtagcc cgcacgctcg gtggtttcgg catccgcctg cagcgcgggg tcgaccgcca
     2701 gccgggcatc cgcgagcgcg gcggcatagc cgcgatagcg ctcgtggaac tcggggtaat
     2761 gcggcgtggc gtcgcccagg aaggcgatgt gccggcagcc ctgcgccagc aggtgcgccg
     2821 tcgccagccg gccgccggcg aagttgtcgc agccgatcga ca
//
LOCUS       DASSVL010000550         2731 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1086349,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000550 DASSVL010000000
VERSION     DASSVL010000550.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2731)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2731)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2731
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1086349"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1732)
                     /locus_tag="VFM52_09660"
     CDS             complement(<1..1732)
                     /locus_tag="VFM52_09660"
                     /EC_number="2.7.6.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008209493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0015970 - guanosine tetraphosphate
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional (p)ppGpp
                     synthetase/guanosine-3',5'-bis(diphosphate)
                     3'-pyrophosphohydrolase"
                     /protein_id="HET8765474.1"
                     /translation="MSATRPPVAAEAGALPPYVQSLQAKLDYLPPAQLDKVLGAYRVA
                     ARAHTGQTRKSGEPYITHPVAVAGVLAEMRMDVETIVAAILHDTLEDTALTRTALVGE
                     FGETVAELVDGVTKLDKMRFGTRQEADAESFRKMLLAMARDLRVILIKLADRLHNMRT
                     LGAKDQDARRRIARETLEIYAPIAQRLGMNKVKAELQDRGFRALYPDRYRVISERIRA
                     ALGNRREAMAKIETALAARLEAEQLSARVVGRIKSPWSIYSKMRSEHKSFAQLMDVYG
                     FRVVVDTAMQCYMALGMVHSLYKPVDRRFKDFIAIPKANGYQSLHTVLLGPFGAPIEV
                     QIRTDEMDRVAVSGVAAHWAYKTESAPANSAQARAREWLTSLADSQVNTPSSREFIEN
                     VKIDLFPDEVYVFTPRGDILALPRNATALDFAYAVHTDVGDHAVAARVDKKLVPLRAK
                     LESGQLVEIITAPSAVPNPAWLEAVVTGKARTAIRQHLKHMQHEDAVDFGHRMLDRAL
                     DARGSSIEAVPSAVIDQFLAEARLKRLEELLADIALGNRMPDVVAGHLLALRDGRPDE
                     SAPGAPLVREK"
     gene            complement(1819..2109)
                     /gene="rpoZ"
                     /locus_tag="VFM52_09665"
     CDS             complement(1819..2109)
                     /gene="rpoZ"
                     /locus_tag="VFM52_09665"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019466236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000345 - cytosolic DNA-directed RNA
                     polymerase complex [Evidence IEA];
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit omega"
                     /protein_id="HET8765475.1"
                     /translation="MARITVEDCLEVVDNRFELVLMATKRARQLAKGAEPAVNPDNDK
                     PTVLALREIAGRRIDQATIDEIDKAERERAEREALEWAAAEVDDDLSKVGDD"
     gene            2314..>2731
                     /locus_tag="VFM52_09670"
     CDS             2314..>2731
                     /locus_tag="VFM52_09670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008435045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VacJ family lipoprotein"
                     /protein_id="HET8765476.1"
                     /translation="MLVPRHWLAAVVLLLLTGCAIAPPRTDDPLQKVNRKVYAFNDTL
                     DKAVLRPAAVTYRKVTNPPVRRSVNNFFTNIQMPITVANDLMQARPSEALGSTGRFLI
                     NLTIGVGGIFDPATRMGLPLNTTDFGITLARWGAPEG"
BASE COUNT          414 a          931 c          913 g          473 t
ORIGIN      
        1 tcttctcgcg caccagcggc gcgcccggcg cggattcgtc cggtcggccg tcgcgcagcg
       61 cgagcagatg gccggcgacg acgtcgggca tgcggttgcc gagcgcgata tcggcgagga
      121 gttcctccag gcgcttgagc cgcgcctcgg cgaggaactg gtcgatcacc gccgacggca
      181 ccgcctcgat gctgctgccg cgggcgtcga gcgcgcggtc gagcatgcgg tggccgaaat
      241 ccaccgcatc ctcgtgctgc atgtgcttca ggtgctggcg gatcgcagtg cgcgccttgc
      301 cggtgaccac cgcttcgagc cacgccggat tgggcaccgc cgacggcgcg gtgatgatct
      361 cgaccagctg cccggattcc agcttcgcgc gcaacggcac cagcttcttg tcgacgcgtg
      421 cggccaccgc gtggtcgccg acgtcggtgt gcacggcata ggcaaagtcc agcgcggtcg
      481 cgttgcgcgg cagcgcgagg atgtcgccgc gcggggtgaa cacgtagacc tcgtccggga
      541 acaggtcgat cttgacgttc tcgatgaatt cgcgcgacga cggcgtgttg acctggctgt
      601 cggccaacga agtgagccat tcgcgggcgc gcgcctgggc gctgttcgcc ggcgccgatt
      661 cggtcttgta cgcccagtgc gcggccacgc cgctgaccgc gacgcggtcc atttcgtcgg
      721 tacggatctg cacctcgatc ggcgcgccga acggcccgag cagcacggtg tgcagcgact
      781 ggtagccgtt ggccttgggg atcgcgatga agtccttgaa acggcggtcg accggcttgt
      841 acaggctgtg caccatgccc agcgccatgt agcactgcat cgcggtgtcc accacgacgc
      901 ggaaaccgta cacgtccatc agctgggcga agctcttgtg ctcgctgcgc atcttcgaat
      961 agatgctcca cggcgacttg atgcgaccaa ccacgcgcgc cgacaactgc tcggcctcga
     1021 gccgggcagc cagcgcggtc tcgatcttgg ccatcgcctc gcggcgattg ccgagcgcgg
     1081 cgcggatgcg ctcgctgatg acgcgatagc gatcggggta gagcgcgcgg aagccgcgat
     1141 cctgcagctc ggccttgacc ttgttcatgc cgagccgctg cgcgatcggc gcatagattt
     1201 ccagcgtctc gcgcgctatg cgccggcgtg cgtcttggtc cttcgcgccc agcgtgcgca
     1261 tgttgtgcag gcggtcggcg agcttgatga ggatcacgcg caggtcgcgc gccatcgcca
     1321 gcagcatctt gcggaagctt tccgcatccg cctcctggcg ggtaccgaag cgcatcttgt
     1381 cgagcttggt gacgccgtcg accagctcgg ccacggtttc gccgaactcg ccgacgagcg
     1441 cggtgcgggt cagtgcggtg tcttcgagcg tgtcgtgcag gatcgccgcg acgatggtct
     1501 cgacgtccat gcgcatctcg gccagcacgc cagccaccgc gaccgggtgg gtgatgtacg
     1561 gctcgccgct cttgcgtgtc tgcccggtat gcgcacgggc ggcgacgcga tacgcgccca
     1621 gcaccttgtc aagctgcgcg ggcggcaggt aatcgagctt ggcttgcagc gactgcacgt
     1681 aaggcggcag tgcgccggct tcggcggcaa cgggcggacg ggtggcactc atgaggggac
     1741 atgttggccg aaaccgcggc gccgcaacag tccgccggat aaacatcgcc tgcagacctt
     1801 cgctgcaggc gtttggcgtc agtcgtcgcc gaccttggac aagtcgtcgt cgacttcggc
     1861 tgcggcccac tccagcgcct cgcgctcggc gcgttcgcgc tcggccttgt cgatctcgtc
     1921 gatcgtggcc tggtcgatgc ggcgcccggc gatctcgcgc aaggccagca ccgtcggctt
     1981 gtcgttgtcc gggttgaccg ccggctcggc gccctttgcc aactgccgcg cgcgcttggt
     2041 tgccatcaac accagctcga agcggttgtc gacaacctca aggcaatctt ccacggtgat
     2101 gcgtgccata ccaaaccctt ggggaataga gacttatacg agccgtgcag tgtagagcag
     2161 tgcgcgctgg cgtggcaatg cggcgagcgc gtaccatgcg cggtccacca ccccgtcacg
     2221 ccctgcgcac acgcgataga aaaccagacg gtacactatt gggcatcccc cctatctgat
     2281 cgcgactaca tgttgacgcg cctcccgccc cgcttgcttg tcccgcgcca ctggctggct
     2341 gccgtggtgc tgctgctgtt gaccggctgc gccatcgcgc cgccgcgcac cgacgatccc
     2401 ctgcaaaagg tcaaccgcaa ggtctacgcg ttcaacgaca cgctggacaa ggccgtgctg
     2461 cggccggcgg cggtgaccta ccgcaaggtg accaacccgc cggtgcggcg ttcggtcaac
     2521 aacttcttca ccaacatcca gatgccgatc acggtcgcga acgacctgat gcaggcgcgc
     2581 ccgtccgagg cgctgggcag caccgggcgg ttcctcatca acctgacgat cggcgtcggc
     2641 ggcatcttcg acccggcgac gcgcatgggc ctgccgctca acaccaccga cttcggcatc
     2701 acgttggcgc gctggggggc accggaaggc g
//
LOCUS       DASSVL010000551         2917 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_394079, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000551 DASSVL010000000
VERSION     DASSVL010000551.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2917)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2917)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2917
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_394079"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..467
                     /locus_tag="VFM52_09675"
     CDS             <1..467
                     /locus_tag="VFM52_09675"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017460892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HET8765477.1"
                     /translation="QQLRSDAQERFDQLAAANARKSAAFMARNAKQPGVVQLPSGIQY
                     SVLKHGDGKVSPTVTSTVVVNYRGMLIDGTEFDSTWAHGAPVSFTIDRVIPGWRDVIP
                     RMRVGDRWKVVIPPQLAYGKEGALPRIGPNEALVFEIELLAIKPPGEDQPAH"
     gene            500..688
                     /locus_tag="VFM52_09680"
     CDS             500..688
                     /locus_tag="VFM52_09680"
                     /inference="COORDINATES: protein motif:HMM:NF018630.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1289 domain-containing protein"
                     /protein_id="HET8765478.1"
                     /translation="MSPETFPAPPTPSTPCIGVCRLGADGWCVGCRRSGDEIARWRTL
                     AEPERLRIMRNVLPQRSR"
     gene            688..1278
                     /locus_tag="VFM52_09685"
     CDS             688..1278
                     /locus_tag="VFM52_09685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017460890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0010945 - coenzyme A diphosphatase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA pyrophosphatase"
                     /protein_id="HET8765479.1"
                     /translation="MDGFAKALLPLSQPPSAPAWNHAEITGVLGTTKRRPAAVLLGVR
                     DDADPRLILTVRNGHLHAHAGQVAFPGGRSEPDDGGALATALRESHEEVGLDPALVTP
                     LGYLDCLETISGYCVTPVVATVAADAALRASPSEVAEVFEVPLAFFLDPGNQHRYTMD
                     YHGYRRDMLEFVHGGHRIWGATAAILLNLLKRMGHA"
     gene            1275..2123
                     /locus_tag="VFM52_09690"
     CDS             1275..2123
                     /locus_tag="VFM52_09690"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008213272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016783 - sulfurtransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase"
                     /protein_id="HET8765480.1"
                     /translation="MKTTLVSVAGLAAMPAASVLIVDCRKELADPDKGRRDYAVGHIP
                     GAVYADLDTDLSDLSRKGLGLGRHPLPSADAFSRVLSRWGWQPGLQVVAYDAGSGAMA
                     AARLWWLLRFAGQRAVAVLDGGFAAWLAAGQPQQTTVPQRAASNVRVSFDATQVIVDH
                     AAVLAAPVPLLVDARAAPRYRGDTEPLDPVGGHVPGARNRPFADNLAADGRFKPVAEL
                     RREFLAVLGARSPAEVVHMCGSGVTACHNLLAMEHAGLVGSRLYAPSWSGWCSDRARP
                     VATGAA"
     gene            complement(2130..2891)
                     /locus_tag="VFM52_09695"
     CDS             complement(2130..2891)
                     /locus_tag="VFM52_09695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007806120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HET8765481.1"
                     /translation="MLDIIPHGDITELRLARPPVNALNLELLQTLHAAFDHAVAGGAR
                     GIVLSGQPGMFSAGVDVPTLLTLDHDGARGYWHEFFATAAALACSPVPLVAAVTGHSP
                     AGGAVLALMCDHRVMADGAWKIGLNEVQVGLTVPDCIQLALRRAIGARPAERLLIAGT
                     MLDAQQALACGYVDALAQPDDVIAHALQWMTDLLALPSRAMLATRRLARADLVATFAD
                     VEALPLDGFLTDYFAAETQTTLQALVARLKSKAPR"
BASE COUNT          410 a          995 c         1078 g          434 t
ORIGIN      
        1 accagcaact gcgcagcgat gcgcaggagc ggttcgacca gctcgccgcc gccaatgcgc
       61 gcaagagcgc cgcgttcatg gcgcgcaacg ccaagcagcc gggtgtggtg cagctgccgt
      121 cgggcatcca gtactcggtg ctcaagcacg gtgacggcaa ggtcagcccg acggtgacca
      181 gcacggtggt ggtcaactac cgcggcatgc tgatcgacgg caccgagttc gacagcacgt
      241 gggcgcacgg cgcgccggtc agcttcacca tcgaccgggt gattcccggc tggcgtgacg
      301 tcatcccgcg catgcgcgtg ggggaccgct ggaaggtggt gatcccgccg cagctcgcct
      361 acggcaagga gggcgcgctg ccgcgcatcg ggccgaacga ggcgctggtg ttcgagatcg
      421 agctgctggc gatcaagccg ccgggcgagg accagcccgc gcactgagcg ggcggcggcg
      481 cactgctaga cttccagcca tgtcacctga aacgtttcct gcgccgccga cgcccagcac
      541 gccgtgcatc ggcgtgtgcc ggctgggcgc cgacggctgg tgcgtcggct gccggcgcag
      601 cggcgacgag atcgcccgtt ggcgcaccct ggccgagccc gaacgcctgc gcatcatgcg
      661 caacgtgctg ccgcagcggt cgcggtgatg gacggtttcg ccaaggcgct gctgccgctc
      721 tcgcaaccgc cgtctgcgcc ggcctggaac cacgcggaga tcaccggtgt gcttggcacc
      781 acgaagcggc ggccggcagc ggtgctgctc ggtgtgcgtg acgacgccga cccgcgcctg
      841 atccttaccg tgcgcaatgg ccatctgcat gcgcacgccg ggcaggtcgc gttccctggc
      901 ggccgcagcg aaccggatga tggcggcgcg ctggccaccg cgctgcgcga aagccacgaa
      961 gaggtcggcc tcgatccggc gctggtgacg ccgctgggtt acctcgattg cctcgagacc
     1021 atcagcggct actgcgtgac gccggtggtg gccacggtgg ccgccgatgc ggcgctgcgc
     1081 gcgtcgccat ccgaggtggc cgaggtgttc gaggtgccgc tggcgttttt cctcgacccg
     1141 ggcaaccagc accgctacac catggattac cacggctatc gccgcgacat gctcgagttc
     1201 gtgcacggcg ggcatcgcat ctggggcgcg accgcggcga tcctgctcaa cctcctgaaa
     1261 cggatggggc acgcatgaaa accacgctgg tttcggttgc cgggcttgcc gcgatgccgg
     1321 cggcatcggt gctcatcgtc gactgccgca aggaattggc cgaccccgac aaggggcgcc
     1381 gggactacgc ggtcggccat attcccggcg cggtgtatgc cgacctcgat accgaccttt
     1441 ccgacctgtc gaggaagggc cttgggctgg ggcgccaccc gctgccctcg gccgacgcgt
     1501 tttcacgggt gctctcgcgt tggggttggc agcccggcct gcaggtggtc gcctatgacg
     1561 ccggcagcgg ggcaatggcg gcagcgcgct tgtggtggtt gctgcgcttt gccggccagc
     1621 gcgccgtggc cgtgctcgac ggcggtttcg ccgcgtggct tgccgccgga cagccgcagc
     1681 agacgacggt gccgcagcgt gcagcaagca atgtgagggt gtcgttcgac gccacgcagg
     1741 tcatcgtcga tcacgccgcc gtgctggcgg cgccggtgcc gctgctggtc gatgcccgcg
     1801 cggcgccacg ctatcgcggc gataccgaac cgctcgaccc ggtcggcggg cacgtgcccg
     1861 gcgcgcgcaa ccgcccgttc gccgacaacc tcgccgccga cggccggttc aagccggtcg
     1921 ccgaattgcg gcgcgaattt ctcgccgtgc tcggtgcgcg gtcccccgcc gaggtggtgc
     1981 acatgtgcgg ctccggcgtc accgcctgcc acaatctgct ggcgatggag cacgccgggc
     2041 tcgtcggctc gcgcctgtac gcgccgtcgt ggagcggctg gtgcagcgat cgcgcgcgcc
     2101 cggtggcgac cggcgctgca tgaccggggt cagcgcggcg ccttgctctt gagccgggcc
     2161 accagtgcct gcagcgtggt ttgggtttcc gccgcgaaat agtcggtgag gaagccgtcg
     2221 agcggcaacg cctcgacgtc ggcgaaggtg gcgacgaggt cggcacgggc gaggcggcgg
     2281 gtggcgagca tcgcgcgcga cggcagtgcg agcaggtcgg tcatccactg cagcgcgtgc
     2341 gcgatgacgt cgtcgggctg ggccagcgca tcgacgtagc cgcacgccag cgcttgctgc
     2401 gcatcgagca tggtgcccgc aatcagcagg cgttcggccg ggcgtgcgcc gatcgcgcgg
     2461 cgcagcgcga gctggatgca atcgggcacg gtcaggccga cctgcacctc gttcaagccg
     2521 attttccagg cgccgtcggc catcacccgg tggtcgcaca tcagcgccag caccgcgccg
     2581 ccggccgggc tgtggccggt gacggcggca accagcggca ccggcgagca ggccagcgcg
     2641 gcggccgtgg cgaagaactc gtgccaatag ccgcgcgcac cgtcatggtc gagcgtgagc
     2701 agggtcggca cgtcgacacc ggcggagaac atgccgggct ggccggacag cacgatgccg
     2761 cgcgcgccgc cggcgacggc gtggtcgaac gccgcgtgca gcgtctgcag cagttcgaga
     2821 ttgagcgcgt tgaccggcgg gcgggcgagg cgcagctcgg tgatgtcgcc gtgcggaatg
     2881 atgtcgagca tgggtgtctc ccctggatga tggcgtg
//
LOCUS       DASSVL010000552         2248 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_309080, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000552 DASSVL010000000
VERSION     DASSVL010000552.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2248)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2248)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2248
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_309080"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(201..1799)
                     /gene="aceB"
                     /locus_tag="VFM52_09700"
     CDS             complement(201..1799)
                     /gene="aceB"
                     /locus_tag="VFM52_09700"
                     /EC_number="2.3.3.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007513661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004474 - malate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="malate synthase A"
                     /protein_id="HET8765482.1"
                     /translation="MALPRERIDASAVEIHGNPTAAQRAILTPEALAFLADLHRRFDG
                     RRRELLAARRVRQARWDAGELPDFRADTAAIRESEWTVGPIPSALRDRRVEITGPVER
                     KMIINALNSGAKVFMADFEDSSTPTFDNVLDGQVNLRDAVAGRIDFTTPEGKRYAVHD
                     DPAVLVVRPRGWHLVDKHFSVDGEPVAGALVDFALFAWHTARTLHRKDRGPYFYLPKL
                     ECMEEAALWDAVMAHAETAIDIPPASMKVTVLIETLPAAFEMHEILHALQSRCVGLNA
                     GRWDYVFSYLKTLRAHRDRLLPERGQVAMTVPFLRNYSELLIQTCHQRGAFAMGGMAA
                     QIPIKGDAAANEAALAKVRADKLREVKAGHDGTWVAHPALVPVAQAVFDEYMPEANQR
                     DVERADVRVGREQLLAPCPGTITRAGFDNNVEVCLRYTAAWLDGLGCVPIHHLMEDAA
                     TAEIARAQLWQWLHHGGLEFDDGAPIDFALFDHALSAHAHRLRESDSTGAAQADAAAQ
                     LIGGLVHADQLADFLTVPAYARLA"
     gene            1939..>2248
                     /locus_tag="VFM52_09705"
     CDS             1939..>2248
                     /locus_tag="VFM52_09705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015448934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HET8765483.1"
                     /translation="MRTKTIRKPRRSAAKKRAQAPDEARELARYYYKGNRLKQLRAFV
                     ATVKLGTLSRAAESLYLSQPSVSLQLQALERELGATLLERRRRRVNLTDAGEALYELA
                     R"
BASE COUNT          357 a          734 c          798 g          359 t
ORIGIN      
        1 gtagtggcgg cggatggcgt tccagcgcgg atcgttgttc cagttgaagg tgagctgttc
       61 ggcggtgggc agcgtggttt tcatggcgtg gctccggtgc gggcgaagaa ggggtggtgg
      121 cagaagcccg ctcgcgggcg acagctcttg gcgcaaggcc gatcgcccgc gagcgggctc
      181 cagcaaacaa acgagcggat tcaggcgagc cgggcgtatg ccggcacggt gaggaaatcg
      241 gcgagctggt cggcgtgcac cagcccgccg atcagctgcg ccgcggcatc ggcctgcgcg
      301 gcgccggtgc tgtccgattc gcgcaggcga tgcgcgtgcg cgctcagcgc gtggtcgaac
      361 aaggcgaagt cgatcggggc gccgtcgtcg aactcgaggc ctccgtggtg cagccattgc
      421 cacagctgcg cgcgggcgat ctcggcggtg gcggcgtctt ccatcaggtg gtggatcggc
      481 acgcagccga ggccatccag ccacgcggcg gtgtagcgca ggcagacctc gacgttgttg
      541 tcgaagccgg cgcgggtgat cgtgccgggg cagggcgcca gcagttgctc gcggcccacc
      601 cgcacgtcgg cgcgctccac gtcgcgctgg ttcgcctcgg gcatgtattc gtcgaacacc
      661 gcctgcgcga ccggcaccag cgccggatgc gccacccagg tgccgtcgtg cccggccttg
      721 acctcgcgca gcttgtcggc gcgcaccttg gccagtgccg cctcgttcgc ggcggcgtcg
      781 cccttgatcg ggatctgcgc cgccatgccg cccatcgcga acgcgccgcg ctggtggcag
      841 gtctggatca gcagctccga atagttccgg aggaacggca ccgtcatcgc gacctggccg
      901 cgctcgggca gcaggcggtc gcggtgcgcg cgcagcgtct tgaggtagga aaacacatag
      961 tcccagcgcc cggcgttgag ccccacgcag cgcgactgca gcgcgtgcag gatctcgtgc
     1021 atctcgaacg cggccggcag cgtctcgatc agcaccgtca ccttcatgct ggccggcggg
     1081 atgtcgatcg cggtttccgc gtgcgccatc accgcgtccc acagcgcggc ctcttccatg
     1141 cactcgagct tgggcaggta gaagtacggg ccgcggtcct tgcgatgcag cgtgcgcgcg
     1201 gtgtgccagg cgaacaacgc aaagtcgacc agcgcgccgg cgaccggttc gccatccacg
     1261 ctgaagtgct tgtcgaccag gtgccagccg cgcgggcgca ccaccagcac cgccggatcg
     1321 tcgtgcacgg cgtagcgctt gccctcgggc gtggtgaagt cgatcctgcc ggcgaccgcg
     1381 tcgcgcaggt tcacctggcc gtcgagcacg ttgtcgaacg tgggcgtcga ggaatcctcg
     1441 aaatccgcca tgaacacctt cgcgccggag ttcagcgcgt tgatgatcat cttgcgctcg
     1501 accggcccgg tgatctccac ccggcggtcg cgcagcgcgg aggggatcgg cccgaccgtc
     1561 cattcggact cgcggatggc ggcggtgtcg gcgcggaaat ccggcagctc gccggcatcc
     1621 cagcgcgcct ggcgcacgcg ccgtgcggcg agcaattcgc gacggcggcc gtcgaaccgg
     1681 cggtgcaggt cggcgaggaa cgccagcgcc tcgggggtga ggatcgcacg ctgggcggcg
     1741 gtcgggttgc cgtggatttc gacggcgctg gcgtcaatgc gttcgcgtgg caaggccatg
     1801 atcggctccg ggctggaagg tggctcgaag ctaggtcaca cacatgcgat ttgacaaaac
     1861 aaatgtttca atttttagta ttgatgttct gtatgtcata cgtaacatca tgaatcgaaa
     1921 gccgtaaggc cctgcctcat gcgcacgaaa accatcagga agccacgtcg cagcgcagca
     1981 aaaaagcgtg cacaggcacc agacgaagcc cgtgaactgg ctcgctacta ctacaagggc
     2041 aaccggctca agcagctgcg tgccttcgtc gccacggtga agctgggcac gctcagccgc
     2101 gccgccgaat cgctgtacct gtcgcagccg tcggtcagcc tgcagttgca ggcgctggag
     2161 cgcgagctgg gcgcgacgtt gctggaacgc cggcgccggc gggtgaacct gaccgatgcc
     2221 ggcgaggccc tgtacgaact ggcacggc
//
LOCUS       DASSVL010000553         2106 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_168024, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000553 DASSVL010000000
VERSION     DASSVL010000553.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2106)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2106)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2106
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_168024"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            145..>2106
                     /locus_tag="VFM52_09710"
     CDS             145..>2106
                     /locus_tag="VFM52_09710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007513576.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="multicopper oxidase domain-containing protein"
                     /protein_id="HET8765484.1"
                     /translation="MAVPDDDAASSAWPAVAGTALRVAFGIVWIVGATLTYSPDFAAH
                     YVGYLHNAAQGQPAWSAWWFAMWIALVTPHAGVFVWLTRLAETALALALIFGFARKAT
                     YILGLLFSLLIWSTAEGFGGPYSVGVTNIGAALSYVLIFAALIIVNYRVGPSLYSVDY
                     LIEKRWPAWRALAEWNVTAEPNESARLPWRVQAPALAGIVVLVALLLAGLQSATNVKS
                     ASPTAAAAAVTPLSLASPQPIAKARDAQLPPVAPGDTANVEITVSDQAVQIASGVEYQ
                     AWTFGKTVPGPVIHVRQGQTVNVVLTNHGTMQHSIDFHAAITPPSLHYVDIMPGESLR
                     FSFVAKVPGAFLYHCGTPPVLLHIANGMYGAIIVDPATPLPKAQESYVLVQGEWYTQQ
                     VSGKLMAGNFQKMQEIRPDEVVFNGAAFQYRDHPLTAKPGDLVRLYVVNAGPSLWSAF
                     HVIGAIFDKVYPGGNPAQAIDGVSTWSVGPGEGAVFDLTLDEPGKYPFVDHAMAHAVL
                     GAIGVLHVQAPAGAPVAKPDISKAAAAAPTPPPAAATGPYRFDAARGAQLYATNCAAC
                     HQPTGLGLPGAFPPLKGNPAVNDADPTTQLTTILHGLRGVAINGISYASAMPPFADSL
                     SDADIADIANHERTSWDNHGKPVTADQVKA"
BASE COUNT          318 a          777 c          698 g          313 t
ORIGIN      
        1 gccgtggccg gcgcgggggt tcgagacatc ttgccgaccg gcgcgcgccg gaccacgcgc
       61 ctgcacgcca gtgaggtcgt agactgccgc cctgccgtcg gcttcgctga cgaagccgaa
      121 accccttcac tggagaaaat cgccatggcc gtacccgacg acgacgcagc ttcttccgcc
      181 tggcctgcgg tggccggcac cgcactgcgt gtggccttcg gcatcgtgtg gatcgtgggc
      241 gccacgctca cctattcgcc cgatttcgcc gcgcattacg tgggctacct gcacaacgcc
      301 gcgcagggcc agccggcatg gtcggcctgg tggttcgcca tgtggatcgc gctggtcacc
      361 ccgcacgcgg gcgtgttcgt gtggctgacg cgcctcgccg agacggcgct ggcgctggcg
      421 ctgatcttcg gcttcgcgcg caaggccacc tacatcctcg gcctgctctt cagcctgctg
      481 atatggagca ccgccgaggg tttcggcggg ccgtactcgg tgggcgtcac caacatcggc
      541 gcggcgctca gctacgtgct gatcttcgcc gcgctgatca tcgtcaacta ccgcgtcggc
      601 cccagcctgt acagcgtgga ttacctgatc gagaagcgct ggccggcgtg gcgcgcgctg
      661 gcggagtgga acgtgacggc cgagccgaac gagtcggcac gcctgccctg gcgcgtgcag
      721 gcaccggcgc tggcgggcat cgtggtgctg gtggcgctgc tgctggccgg gctgcagagc
      781 gccaccaacg tgaagtcggc ctcgccgacg gcggcggcgg cggcagtgac gccgctgtcg
      841 ctggcctcgc cgcagcccat cgccaaggcg cgcgacgcgc agctgccgcc ggtggcgccg
      901 ggcgataccg cgaacgtgga gatcaccgtc tccgaccagg ccgtgcagat cgccagcggc
      961 gtcgagtacc aggcctggac cttcggcaag accgtgcccg gcccggtgat ccacgtgcgc
     1021 cagggacaga cggtcaacgt ggtgctgacc aaccacggca ccatgcagca ctcgatcgac
     1081 ttccacgccg cgatcacgcc acccagcctg cattacgtgg acatcatgcc gggcgagtcg
     1141 ctccggttct cgttcgtggc caaggtgccg ggtgccttcc tctaccactg cggcacgccg
     1201 ccggtgctgc tgcacatcgc caacggcatg tacggcgcga tcatcgtcga cccggccacg
     1261 ccgctgccca aggcgcagga aagctacgtg ctggtgcagg gcgagtggta cacccagcag
     1321 gtgtccggca agctgatggc cggcaacttc cagaagatgc aggagatccg tccggacgag
     1381 gtggtgttca acggcgccgc attccagtac cgcgaccatc cgctgaccgc gaagcccggc
     1441 gacctggtgc gcctgtacgt ggtcaatgcc ggccccagcc tgtggagcgc cttccacgtg
     1501 atcggcgcga tcttcgacaa ggtctacccc ggcggcaacc cggcgcaggc gatcgacggc
     1561 gtctccacct ggtcggtggg cccgggcgag ggcgcggtgt tcgatctcac gctggatgaa
     1621 cccggcaagt acccctttgt cgatcacgcg atggcgcacg ccgtgctggg tgcgatcggc
     1681 gtgttgcacg tgcaggcgcc agctggtgcg ccggtcgcca agccggatat cagcaaggca
     1741 gccgcagccg cgcccacccc gccgccggcc gctgccactg gcccttaccg cttcgacgcc
     1801 gcgcgcggcg cgcagctcta cgccaccaac tgcgcggcct gccaccagcc caccggcctg
     1861 ggcctgcccg gcgccttccc gccgctcaag ggcaacccgg cggtgaacga cgccgacccg
     1921 accacccagc tcaccaccat cctgcacggc ctgcgcggcg tcgccatcaa cggcatcagc
     1981 tacgccagcg cgatgccgcc cttcgccgac tcgctcagcg acgccgacat cgccgacatc
     2041 gccaaccacg agcgcacctc gtgggacaac cacggcaagc cggtcaccgc cgaccaggtg
     2101 aaggcg
//
LOCUS       DASSVL010000554         2346 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1086481,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000554 DASSVL010000000
VERSION     DASSVL010000554.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2346)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2346)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2346
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1086481"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            164..1075
                     /locus_tag="VFM52_09715"
     CDS             164..1075
                     /locus_tag="VFM52_09715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007510844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8765485.1"
                     /translation="MRRLLLPLLLCLLPFAAASQTVDDASGKLAAKLLQQPPAQMAEV
                     QPGVVVPLWRGADGRLLAVKADNRSGAQALRGTPLSFHAVDAASVMNTGLEYGLTKNW
                     QAHADVNQQSWVNSPLRVVGSEVGATYNDGRYSLGLSVGTNNAANPASLPRVLPGVTP
                     SVDGLSGFDSSSQFNARGRLAFGAKSGVDLGASVGRIHLLPGNLLGISTLDQKAISFG
                     VDHGAVSGTLVGRTMAPLAGIPGSGYGADRRWNSIDLGVTWRLPWQGSLSVGAQNLWS
                     SGTPANTPAGPEPDQSRTPYVQYHQDL"
     gene            complement(1148..2053)
                     /locus_tag="VFM52_09720"
     CDS             complement(1148..2053)
                     /locus_tag="VFM52_09720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007510842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4097 family beta strand repeat-containing
                     protein"
                     /protein_id="HET8765486.1"
                     /translation="MKALLACTPLLLCLSVGQALADTPINLSHAATPNARISIANVSG
                     SVRVTAWDRPLVEVSGELGRGAKPLAITGNNASLAIKVEPQAGGGWFNWGSNRNMDPT
                     TLDLRVPRGASLDVQVVSAPLSIDGTDGGTIKVTTVSGRARINARTPQLTVDSVSGTI
                     ELAGRATQAGLQSVSGDILAPVIGDRAKLQTVSGRIQAGGGPWHKFALSTVSGDAQLT
                     GSLAAGGSLTVDSMSGNVQLQLPAATSATLHASTFSGDLRNDFGAAARDGTGSVHTLD
                     TRLGTGNGSIKLETFSGDLHIRKAD"
     gene            complement(2059..>2346)
                     /locus_tag="VFM52_09725"
     CDS             complement(2059..>2346)
                     /locus_tag="VFM52_09725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007080638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8765487.1"
                     /translation="PWLLAAMLAGAFALAGGIGAGLHSRAGHAAAETAVTPVPPSTDP
                     RLRGAFIELDATRDVLHDAMRQNPDSPLLRRLLARTERQQTQLRHLAHEAG"
BASE COUNT          355 a          755 c          853 g          383 t
ORIGIN      
        1 gcgccgccag cggaacatcc ggaaggcccg cgcggtctac ccgtgaggca cttcacacaa
       61 tgccgcgaat tactgtaccg aaggcttgca acgatgttag gtaaatgtaa aatatggtct
      121 gcgttcatct gacgcattca atcgttgcga gttcaagccc gccatgcgcc gtctgttgct
      181 tccactgctg ctctgcctgc tgccgttcgc ggcggcaagc cagactgtgg acgatgccag
      241 cggcaagctc gcggcgaagc tgctgcagca gccaccggca cagatggctg aagtgcagcc
      301 gggcgtcgtc gtgccgttgt ggcgtggcgc cgatggtcgt ctgctcgcgg tcaaggcgga
      361 caatcgcagc ggcgcacagg cgctgcgtgg cactccgctg tcgttccatg ccgtcgatgc
      421 cgccagcgtg atgaacaccg ggctcgagta cgggctcacg aagaactggc aggcccacgc
      481 ggacgtcaac cagcagtcgt gggtcaacag tccgctgcgg gtcgtcggca gtgaggtcgg
      541 agccacctac aacgacggac gctacagtct cggcctcagc gtcggcacca acaacgccgc
      601 gaatccggcc agcctgccgc gcgtgctgcc gggggtgacg ccgagcgtcg acggtttgtc
      661 cggtttcgac agcagctcgc agttcaatgc gcgcggccgg ttggcatttg gtgcgaaaag
      721 cggcgttgac ctcggggcca gcgtcgggcg cattcacctg ctgccgggca atctgctggg
      781 catcagcacg ctcgaccaga aggcgatcag cttcggcgtc gatcacggcg ccgtcagcgg
      841 caccctggtc gggcgcacga tggcgccgct ggcgggcatc cccggcagtg gctatggcgc
      901 tgaccggcgc tggaacagca tcgatctggg cgtgacctgg cgcctgccgt ggcagggctc
      961 gctcagtgtc ggcgcacaga acctgtggtc gtcgggcacg ccggccaaca cgccggccgg
     1021 gccggagccg gaccagtcgc gcacgccgta cgtgcaatac caccaggatc tctgatcccg
     1081 gaagtcggta ccgggaaccg cacaacgccg tcgccaccgc gacggcgttc ttgcatgcgc
     1141 gaggcgctca atccgccttg cggatgtgca ggtcgccact gaaggtttcg agcttgatcg
     1201 agccgttgcc ggtgccgagg cgggtgtcga gggtgtgcac gctgccggtg ccgtcgcgcg
     1261 cggcagcgcc gaaatcgttg cgcaggtcgc cgctgaacgt gctggcatgc agggtggccg
     1321 aggtggccgc cggcagttgc agttgcacgt tgccgctcat gctgtcgacg gtgaggctgc
     1381 caccggcggc gaggctgccg gtgagctggg cgtcgccgga aaccgtgctc agcgcgaact
     1441 tgtgccacgg cccgccgccc gcctggatgc gcccggaaac ggtctgcagc ttcgcccgat
     1501 cgccgatgac cggggcgagg atgtcgccgc tgacgctctg caggccggcc tgcgtggcgc
     1561 gaccggcgag ctcgatcgtg ccgctgacgc tgtcgacggt gagttgcggg gtgcgggcgt
     1621 tgatccgtgc acgaccgctc accgtggtga ccttgatggt gccgccgtcg gtgccgtcga
     1681 tgctgagcgg agcgctgacc acctgcacgt cgaggctggc accgcgcggc acgcgcaggt
     1741 cgagcgtggt tggatccatg ttgcggttgc tgccccagtt gaaccagccg ccgccggctt
     1801 ggggttcaac cttgatcgcc aggctggcgt tgttgccggt gatcgccagc ggcttggcac
     1861 cacggccgag ctcgccgctg acctcgacca gcgggcgatc ccaggccgtc acccgtaccg
     1921 agccggacac gttggcgatg ctgatgcgcg cattgggcgt ggcggcgtgg ctgaggttga
     1981 tcggggtgtc ggcgagtgcc tgcccgacgg acaggcagag cagcaacggg gtgcaggcaa
     2041 gcagggcttt catgatcgtc aaccggcttc gtgggcaagg tgccgaagct gcgtctgctg
     2101 gcgttcggtg cgcgccagca agcgccgcaa cagcggggaa tcggggtttt gccgcatcgc
     2161 gtcgtgcaac acgtcgcggg tggcatcgag ttcgatgaag gcgccgcgca ggcgtggatc
     2221 ggtactgggc ggcaccggtg tcaccgcggt ctcggcggcg gcgtgcccgg cgcgggaatg
     2281 caggccggcg ccgatgccgc cggcaagcgc gaacgcgccg gcgagcatgg cggcaagcag
     2341 ccacgg
//
LOCUS       DASSVL010000555         3005 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_676805, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000555 DASSVL010000000
VERSION     DASSVL010000555.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3005)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3005)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3005
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_676805"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..386)
                     /locus_tag="VFM52_09730"
     CDS             complement(<1..386)
                     /locus_tag="VFM52_09730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015446642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein MreC"
                     /protein_id="HET8765488.1"
                     /translation="MARAREGSSPLFAGNAAGTLRLIVYLALAVVLMVLDQRNGWLWQ
                     LRSAASAVVEPVYRLAGLPAAGVHTLGVAFADRQLLTSQNQRLREDLLLANAKLNRMA
                     AVAEQNERLRRLLDTQHSLKLNVQLAR"
     gene            complement(408..1454)
                     /locus_tag="VFM52_09735"
     CDS             complement(408..1454)
                     /locus_tag="VFM52_09735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0000902 - cell morphogenesis [Evidence
                     IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein"
                     /protein_id="HET8765489.1"
                     /translation="MFKKFRGIFSNDISIDLGTANTLIYVRGQGIVLNEPSVVAIRQD
                     RGPGGPRTIAAVGGDAKRMLGRTPGNIATVRPMKDGVIADFTMTEAMLQHFIKQVHKS
                     RFLRPSPRVLVCVPCGSTQVERRAIKESAEGAGARDVFLIEEPMAAAIGAGIPVHEAR
                     GAMVLDIGGGTSEVAVISLNGIVYSQSARVGGDRFDEAIINYVRRNHGTLIGESTAER
                     IKLEIGCAFPQDDVKEIEISGRNLAEGVPRMFTINSNEILEALHEPLAGIVAAVKSAL
                     EQTPPELCSDVAERGIVLTGGGALLRDLDRLISEETGLHVQVADDPLTCVARGGGKAL
                     ELIDQHGSDFFSPE"
     gene            1727..2662
                     /locus_tag="VFM52_09740"
     CDS             1727..2662
                     /locus_tag="VFM52_09740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008437272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate kinase family protein"
                     /protein_id="HET8765490.1"
                     /translation="MPAVICGSLAYDTIMVFQDQFKNHILPDQMHILNVSFLVPAMRR
                     EFGGCAGNIAYNLKLLGGDPLPVAAVGQDFAPYRQHMQDCGIRLDGVRVFEEQFTPQC
                     FITTDLDNNQITAFHPGAMSSAQENHVRDIPQIDFAIVAPDGREAMLQHVDEFAARGV
                     PFIFDPGQAMPLFNGDEFRSMIAKSTYVIVNDYESQLLQTRTGWSAAEIASHVTAYIV
                     TQGPRGSVIHVGEESHHIPPARERVIVDPTGCGDAYRAGLMFGIMHGKDWPTTGRIAS
                     LMGALKVEHPGTQNQRFNYAEFAAEFADQFGYALD"
     gene            complement(2670..>3005)
                     /locus_tag="VFM52_09745"
     CDS             complement(2670..>3005)
                     /locus_tag="VFM52_09745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010368988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_function: GO:0016773 - phosphotransferase activity,
                     alcohol group as acceptor [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FGGY-family carbohydrate kinase"
                     /protein_id="HET8765491.1"
                     /translation="RDVLGAMEADAGIALTQLRADGGAIGNDFLAQFQSDMLGVPLLR
                     PRITETTALGAAYLAGLAVGVWDSREQIARLWQQDRRFDPAMEASRRERLYSGWQAAV
                     QATMGFPAS"
BASE COUNT          503 a         1038 c          981 g          483 t
ORIGIN      
        1 cgcgccagtt gcacgttgag cttcaggctg tgctgggtat cgagcaaccg ccgcagccgt
       61 tcgttctgct cggcgaccgc ggccatgcgg ttcaacttgg cgttggccag cagcaggtct
      121 tcgcgcaggc gctggttctg cgaggtcagc agctggcgat cggcaaaggc gacgccgagg
      181 gtgtgcaccc cggccgcggg caggccggcc agtcgataga ccggctcgac caccgccgag
      241 gcggccgagc gcagctgcca cagccagcca ttgcgctggt caagcaccat cagcaccacc
      301 gccagcgcca gatagacgat cagccgcagc gtgccggccg cgttgccggc aaacaggggg
      361 gaggaacctt cgcgtgcgcg cgccatcgcg gcccccgtcg ccgcgcgcta ttcgggcgag
      421 aagaagtcgc tgccatgctg atcgatcagc tccagcgcct tgccgccgcc gcgcgccacg
      481 caggtcagcg ggtcgtcggc cacctgcacg tgcaggccgg tttcctcgga gatcagccgg
      541 tccaggtcgc gcagcagcgc gccgccgccg gtgagcacga tgccgcgctc ggcgacgtcg
      601 gagcacagtt ccggcggagt ctgttccaac gccgacttca ccgccgccac gatgccggcc
      661 agcggctcgt gcagtgcctc gaggatttcg ttggagttga tcgtgaacat gcgcggcacg
      721 ccctcggcaa ggttgcgccc ggagatctcg atctccttga cgtcgtcctg cgggaaggcg
      781 cagccgattt ccaacttgat ccgctcggcg gtggattcgc cgatcagggt gccgtggttg
      841 cggcgcacgt agttgatgat cgcctcgtcg aaacgatcgc cgccgacgcg ggcggactgc
      901 gagtagacga tgccgttgag cgagatcacc gccacctcgg aggtgccgcc gccgatgtcc
      961 agcaccatcg cgccgcgcgc ctcgtgcacc ggaatgccgg cgccgatcgc cgcagccatc
     1021 ggctcttcga tcaggaacac gtcgcgggca ccggcgcctt cggccgattc cttgatggcg
     1081 cggcgctcga cctgggtcga gccgcacggc acgcacacca gcacgcgcgg gctcggccgc
     1141 aggaagcgcg acttgtgcac ctgcttgatg aagtgctgca gcatcgcctc ggtcatggtg
     1201 aagtcggcga tcacgccgtc cttcatcggg cgcaccgtgg cgatgttgcc cggcgtgcgg
     1261 cccagcatgc gcttggcgtc gccacccacc gccgcgatcg tgcgcggacc accggggccg
     1321 cggtcctggc gaatcgccac caccgaaggc tcgttcaaca cgatgccctg accacgcacg
     1381 tagatcagcg tgttggccgt gccgaggtcg atggagatgt cgttggaaaa gatgccgcgg
     1441 aacttcttga acatgggtcc gccgtgggtc ggccaggcta aacagacaag ctcgccagtc
     1501 tagtcaggcc caccgttccg cgcaaggaaa aacacgttaa gaaacccttg tgcaacacgg
     1561 ccataagcga ttttcctgtg ccgtggactg aactgcgacg caggtcgcga agtcgccagc
     1621 acggacggat ggcggtacga tggcggcctt tggctgcagg gaccgattct gcccgtccgg
     1681 gcacgcgccc gcagcctccc atctcaaatc ggggttttct cgcatcatgc ctgccgtcat
     1741 ctgcggatcg ctcgcctacg acaccatcat ggtgttccag gatcagttca agaaccacat
     1801 cctgcccgac cagatgcaca tcctgaacgt gtcgttcctg gtgccggcca tgcggcgcga
     1861 gttcggcggc tgcgccggca acatcgccta caacctcaag ctgctgggcg gcgacccgct
     1921 gccggtggca gcggtgggcc aggatttcgc gccctaccgg cagcacatgc aggactgcgg
     1981 catccggctc gatggcgtgc gcgtgttcga ggagcagttc accccgcagt gcttcatcac
     2041 cacggacctg gacaacaacc agatcaccgc cttccacccc ggcgcgatgt ccagtgcgca
     2101 ggagaaccac gtccgcgaca tcccgcagat cgacttcgcg atcgtggcgc ccgatggccg
     2161 cgaggcgatg ctgcaacacg tcgacgaatt cgccgcgcgc ggcgtgccgt tcatcttcga
     2221 tcccggccag gcgatgccgt tgttcaacgg cgacgagttc cgctcgatga tcgccaaatc
     2281 gacttacgtg atcgtcaacg actacgaatc ccagttgctg cagactcgca ccggctggag
     2341 tgcggcggag atcgccagcc atgtcaccgc ctacatcgtg acccagggtc cacgcggttc
     2401 ggtgatccac gtgggcgagg agagccacca cattccgccg gcgcgcgagc gcgtcatcgt
     2461 cgatccgacc ggctgcggcg acgcctaccg ggccggcctg atgttcggca tcatgcatgg
     2521 caaggactgg cccaccaccg gccggatcgc ctcgctgatg ggtgcgctga aggtcgagca
     2581 ccccggcacc cagaaccagc gtttcaacta cgccgagttt gccgcggagt tcgccgacca
     2641 gttcggatac gcactggact gagtggaagt cagctcgcgg gaaagcccat cgtggcctgc
     2701 accgccgctt gccagccgct gtagaggcgc tcgcgacggg atgcctccat cgcgggatcg
     2761 aagcggcgat cctgctgcca caaccgcgcg atctgctcgc ggctgtccca gacgccgacc
     2821 gccaggccgg ccagataggc ggcgcccagc gcggtggttt cggtaatccg gggccgcagc
     2881 agcggcacgc cgagcatgtc gctctggaac tgggccagga aatcgttgcc gatggcgccg
     2941 ccgtcggcgc gcagctgcgt gagcgcgatg ccggcatcgg cctccatggc gcccagcacg
     3001 tcgcg
//
LOCUS       DASSVL010000556         3162 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_803556, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000556 DASSVL010000000
VERSION     DASSVL010000556.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3162)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3162)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3162
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_803556"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1553
                     /gene="pgm"
                     /locus_tag="VFM52_09750"
     CDS             <1..1553
                     /gene="pgm"
                     /locus_tag="VFM52_09750"
                     /EC_number="5.4.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007512236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004614 - phosphoglucomutase activity
                     [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="phosphoglucomutase
                     (alpha-D-glucose-1,6-bisphosphate-dependent)"
                     /protein_id="HET8765492.1"
                     /translation="PDPSEPTQRVAFGTSGHRGSSFTRSFNAAHILAISQAICEYRKA
                     QGIDGPLYIGCDTHALSQPAFETALEVLVANGVEVMISAGAEFTPTPAVSHAILAHNK
                     GRTTGLADGIVVTPSHNPPDNGGFKYNPPNGGPADTHITQGVQDRANALLEAGLAGVH
                     RVPYAQARKSALVHAHDFLAQYAGDLAAIVDFDVIRGAGLRLGVDPLGGAGVHYWGAI
                     AERYRLPLDVLSEVVDPQFAFMSVDWDGKIRMDPSSRYAMARLISLKDKYDVAFAADT
                     DHDRHGVVARSVGLLPANHYLTVLVDYLFRHRPHWNRAAAVGKTVVSTALIDRVAKRL
                     GRTLYEVPVGFKWFAPGLHDGSLGFGWEESAGASTLCFDGGAWSTDKDGLVPGLLAAE
                     ITAREGRDPGEVYARIAAELGTPFGSRIDAAATPAQKAKLKALSPAQITATTLAGEPI
                     THVLDKAPANGAAIGGIKVVTANGWFAARPSGTESIYKIYAESFKGEAHLQRLLEEAQ
                     GVVDAALR"
     gene            complement(1660..2940)
                     /gene="purD"
                     /locus_tag="VFM52_09755"
     CDS             complement(1660..2940)
                     /gene="purD"
                     /locus_tag="VFM52_09755"
                     /EC_number="6.3.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008436943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004637 - phosphoribosylamine-glycine
                     ligase activity [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylamine--glycine ligase"
                     /protein_id="HET8765493.1"
                     /translation="MKILVIGNGAREHALAWKLKQSPRVDEVIVAPGNAGTARERGVR
                     NADVAVTDLDGLLALAKAEKVALTVVGPEVPLVAGVVDKFRDAGLRIYGPRAVAAQLE
                     GSKAFTKDFLHRHNIPTARYAVFTQLAPALAYVREHGAPTVIKADGLAAGKGVVVALT
                     QQDAEQALHDMLGAHAFGSASARVVIEEFLDGEEASYIVMSDGTHALPMASSQDHKRR
                     DEGDLGPNTGGMGAYSPAPVVTPEVERRILKEVIEPTLHGMAAEGAPFIGFLYAGLMI
                     DRAGNPKVIEFNVRFGDPETQPILLRLKSDFVELIEAALDGHLDTTRAQWDARPAIGV
                     VLASGGYPGKVETGKRIDGLDANLGTDVKVFHAGTRLDADGRVLTAGGRVLTVCALGA
                     DIAAARERAYAAAATIHFDGGFCRRDIAHRALHR"
BASE COUNT          455 a         1145 c         1094 g          468 t
ORIGIN      
        1 tgcccgaccc gtccgaacca acgcagcgcg tggcgttcgg cacgtcgggc caccgcggca
       61 gttccttcac gcgcagcttc aacgccgcgc acatcctggc catcagccag gcgatctgcg
      121 agtaccgcaa ggcgcagggc atcgatggcc cgctctacat cggctgcgac acccacgcgc
      181 tgtcgcagcc tgcgttcgag accgcactgg aagtgctggt cgcgaacggc gtcgaggtga
      241 tgatttccgc cggcgcggag ttcaccccga cgccggcggt gtcgcacgcg atcctcgcgc
      301 acaacaaggg ccgcacgacg gggttggccg acggcatcgt cgtcaccccg tcgcacaacc
      361 cgccggacaa cggcggcttc aagtacaacc cgccaaacgg cggcccggcc gatacccaca
      421 tcacgcaggg cgtgcaggac cgcgcgaacg cgctgctcga agccggcctc gctggcgtgc
      481 accgcgtgcc gtatgcgcag gcgcgcaagt cggcgctggt gcacgcgcac gatttccttg
      541 cccagtacgc cggtgacctc gcggcgatcg tcgatttcga cgtgatccgc ggcgcggggc
      601 tgcgcctcgg cgtcgatccg ctcggcggcg ccggcgtgca ctactggggc gcgatcgccg
      661 agcgctaccg gctgccgctc gacgtgctga gcgaagtggt cgatccgcag ttcgccttca
      721 tgagcgtgga ctgggacggc aagatccgca tggacccttc ctcgcgctac gcgatggcgc
      781 gcctgatcag cctcaaggac aagtacgacg tggccttcgc cgccgacacc gaccacgacc
      841 gccacggcgt cgtcgcgcgc tcggtcggcc tgctgcccgc caaccattac ctcaccgtgc
      901 tggtggatta cctgttccgc catcgcccgc actggaaccg ggccgcggcc gtgggcaaga
      961 ccgtggtcag cactgcgctg atcgatcgcg tggccaaacg cctcggccgc acgctgtacg
     1021 aggtgccggt cggcttcaag tggttcgcgc ccggcctgca cgacggctcg ctcggcttcg
     1081 gctgggagga aagcgccggc gcctcgacgc tgtgcttcga cggcggggcg tggagcaccg
     1141 acaaggatgg cctcgtgccc ggcctgctcg ccgccgagat caccgcacgc gaaggccgcg
     1201 accccggcga ggtctacgcg cgcatcgccg ccgagctcgg caccccgttc ggcagccgca
     1261 tcgacgccgc cgcgaccccg gcgcagaagg cgaagctcaa ggcgctgtcg cccgcgcaga
     1321 tcaccgccac cacgctcgcc ggcgagccga tcacccacgt gctcgacaag gcgcccgcca
     1381 acggcgcggc gatcggcggc atcaaggtcg tcaccgccaa cggctggttc gccgcgcgcc
     1441 cctccggcac cgagtcgatc tacaagatct acgccgaaag cttcaagggc gaagcgcacc
     1501 tgcagcgcct gctggaagag gcgcagggcg tggtggacgc cgccctgagg taggggtccg
     1561 caagcgagcg acgttttttt cgaaccgcat cagcgcagga gcatcgcccg cggacgggcc
     1621 ccacagggca ggtccgcgat tcgggggatt gccagcggct cagcggtgca gcgcgcggtg
     1681 ggcgatgtcg cggcggcaga agccgccgtc gaagtggatg gtcgccgcgg cggcataggc
     1741 cctttcgcgc gcggcggcga tatccgcgcc cagcgcgcac acggtgagca cgcggccgcc
     1801 ggcggtcagc acgcggccat cggcatcgag cctggtgccg gcgtggaata ccttgacgtc
     1861 ggtgccgagg ttggcgtcga gcccgtcgat gcgcttgccg gtttcgacct tgccggggta
     1921 gccgccggag gcgagcacca cgccgatcgc cgggcgcgcg tcccactgcg cgcgcgtggt
     1981 gtccaggtgg ccgtcgagcg cggcttcgat caactcgacg aaatcggact tcaggcgcag
     2041 caggatcggc tgggtttccg ggtcgccgaa gcgcacgttg aattcgatca ccttcgggtt
     2101 gccggcgcgg tcgatcatca gtccggcgta caagaagccg atgaacggcg cgccctcggc
     2161 cgccatgccg tgcagcgtcg gttcgatcac ttccttcagg atgcgccgct ccacctcggg
     2221 cgtgaccacc ggcgccggcg agtacgcgcc catgccgccg gtgttcgggc cgaggtcgcc
     2281 ctcgtcgcgg cgcttgtggt cctggctcga cgccatcggc agcgcatgcg tgccgtcgct
     2341 catcacgatg tagctggctt cctcgccgtc gaggaactcc tcgatcacca cccgcgccga
     2401 ggcgctgccg aacgcgtgcg cgccgagcat gtcgtgcagc gcctgctcgg cgtcctgctg
     2461 cgtcagcgcg acgacgacgc ccttgccggc ggccaaacca tcagccttga tcacggtcgg
     2521 cgcgccgtgc tcgcgcacgt aggccagcgc gggcgccagc tgggtgaaca ccgcgtagcg
     2581 cgcggtcggg atgttgtggc ggtgcaggaa atccttggtg aacgccttcg agccctcgag
     2641 ctgcgcggcg accgcgcgcg ggccgtagat gcgcagcccg gcgtcgcgga acttgtccac
     2701 cacgccggcc accagcggca cctcggggcc gaccacggtc agcgcgacct tttccgcctt
     2761 ggccagcgcc agcaggccat cgaggtcggt cactgcgacg tcggcattgc gcacgccgcg
     2821 ctcgcgtgcc gtgcccgcgt tgcccggcgc cacgatcacc tcgtccaccc gcggcgactg
     2881 cttgagcttc cacgccagcg cgtgctcgcg cgcaccgttg ccgatgacga ggattttcat
     2941 gccgcagggc tccggtagcg cgtgggttgg ccgggtattg tagccggccg cgcggctggc
     3001 cttgccggga ttccgcaggc ttcttgccgg tggcgccgaa ccggcccgcg gcgacatact
     3061 gcgtcgcgcc ctggtgcttg gcggctcgcc catgacggcg gggtcgacgc cggggcgcgg
     3121 ggttgcagca aggctcgttc acttccggca aggggaacat ca
//
LOCUS       DASSVL010000557         4875 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_605987, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000557 DASSVL010000000
VERSION     DASSVL010000557.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 4875)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4875)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4875
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_605987"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..533)
                     /locus_tag="VFM52_09760"
     CDS             complement(<1..533)
                     /locus_tag="VFM52_09760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008437885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic nucleotide-binding domain-containing
                     protein"
                     /protein_id="HET8765494.1"
                     /translation="MRREAPPVAVGAPDFCRTCALSSACAMVGYGLPELSPLHSLMEH
                     LGPYRAGDAVFRQGDAFEAVYAVRAGAVKTRRLDRDGNEQVLGFYLPGEVIGLDAIYP
                     AQFSCDAIALEDAQLCRFSFPAMSLLATEEPAVQKHLFRLIGQRLGMRRPPSGDHGAD
                     ERMAAFLVDLGDRYAARG"
     gene            complement(584..1984)
                     /gene="hemN"
                     /locus_tag="VFM52_09765"
     CDS             complement(584..1984)
                     /gene="hemN"
                     /locus_tag="VFM52_09765"
                     /EC_number="1.3.98.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007080435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051989 - coproporphyrinogen dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-independent coproporphyrinogen III
                     oxidase"
                     /protein_id="HET8765495.1"
                     /translation="MNHAIQIPEFDPALIARYDVAGPRYTSYPTAPQFHAGFGEQALR
                     AVIQASNEEPIPRPLSIYVHVPFCVSPCFYCGCNRIITRDVGKADRYLERLHREIELT
                     AKLFDRDRQVTQLHFGGGTPNFLDTPRMRELMGVLARHFPFAPAGEREFGIEIDPRFA
                     DAAYIAGLGELGFNRISVGIQDFDPAVQEAVNRIQSVAQTREVLEAAKASGFRSASVD
                     LIYGLPKQTVAGFERTLDEVIGLAPDRVAVYAYAHLPEMFKAQRQIQSADLPSPATRL
                     ALIGRALERLGAAGYAYVGMDHFAKLDDELVSAQRAGTLQRNFQGYSTHGECDIIGLG
                     VSAIGRIGDSYSQSARDLTGYYAALDNGRLPVARGLALSRDDLIRREVIGQLMCHGEL
                     DMVEFGAQYGVCFAEYFTAELERLHALAADGLVTLDERAIRVTARGRLLLRVVAMCFD
                     AYLGRAAERPRFSRTI"
     gene            2204..3073
                     /gene="motA"
                     /locus_tag="VFM52_09770"
     CDS             2204..3073
                     /gene="motA"
                     /locus_tag="VFM52_09770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017461307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor stator protein MotA"
                     /protein_id="HET8765496.1"
                     /translation="MLVMVGSLIVLVCVLGGYLLAHGHLLALWQPYEFMIIFGGALGA
                     FITANPTKVLKAAASEIGALFKGPKYSKEDFVDLLSLLYDIFGVMRKDGLLGMEAHIE
                     NPHSSAVFSAYPRLLREQHLVEFITDCLRLIIGGNMEPQELEALLDAEVETHHAEAEV
                     PAHAVATMADSLPGFGIVAAVLGIVTTMANLSDDTSEVGMHVAGALVGTFLGILLCYG
                     FIGPLGAAMEARAREDGRAFECVKVGLLANLRGYNPKVSVEFARKVLSANKRPTFQDL
                     ENHLKGEHAGAGA"
     gene            3070..4095
                     /gene="motB"
                     /locus_tag="VFM52_09775"
     CDS             3070..4095
                     /gene="motB"
                     /locus_tag="VFM52_09775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017356508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor protein MotB"
                     /protein_id="HET8765497.1"
                     /translation="MSDDGQRPLIVVKRVRKGGGHHGGAWKVAYADFVTAMMAFFLVM
                     WIIGVGTRQQKAAISEYFRNPSAKAGTATVAPPGQNGPGGASDAMIKLGGAMDLSHGP
                     GKDRHNGPTGAPTKDEIDQAARAQDKARLEELKQELHAAIEKSQALAPFKDQLLLDIT
                     PEGLRIQIVDKQNRPMFDLGSAHLKDYTRAILVDLAGFINKVPNRISITGHTDDAPYS
                     SDNGYSNWELSTDRANAARRALLVGGLQVGKVARVVGLAASVPLDRQNPADPINRRIS
                     IIVMTKQAEKAALSQDVVSASPPASSKGVPTVTAGPIAAPPAAPPSAGAIVPKLPVPP
                     VIHPSQG"
     gene            complement(4111..>4875)
                     /locus_tag="VFM52_09780"
     CDS             complement(4111..>4875)
                     /locus_tag="VFM52_09780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008439127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005247 - voltage-gated chloride channel
                     activity [Evidence IEA];
                     GO_process: GO:0006821 - chloride transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chloride channel protein"
                     /protein_id="HET8765498.1"
                     /translation="FQVSQYLGVPYPQYAIDFSSRFTELLFLKTVLIGVLCGGVAWVF
                     VELMRKSREVFGAVRERYGLWPPLVPMLGGVVVAVLLLAVPVQYIGLSLPVMDQALHG
                     AAMPWLGFAWKALLVAVTLGSGFYGGIVTPQFVMGAVAGGAFAPLLGLPPALGAAVGL
                     VAVVAAASNAPMAAILMGIELFGANATLYVAGACVAAYLIIGHRSVYPEQQIAFSKSS
                     WIFARAGLPVGQEKVRLSYGLLRWLRLRRRKRRTHD"
BASE COUNT          845 a         1757 c         1612 g          661 t
ORIGIN      
        1 ccgcgcgccg cgtagcggtc gccgagatcg accaggaacg ctgccatgcg ctcgtctgcg
       61 ccgtggtcgc ccgacggcgg gcggcgcatg cccagccgct ggccgatcag gcggaacaga
      121 tgcttctgca ccgccggctc ctcggttgcc aggaggctca tggccgggaa cgaaaaccgg
      181 cagagctggg cgtcttccag cgcgatcgca tcacacgaaa actgcgccgg gtagatcgca
      241 tccagcccga tcacctcgcc gggcagatag aagccgagca cctgttcatt gccgtccctg
      301 tcgagccggc gcgtcttgac tgccccggcg cgcactgcgt acaccgcctc gaaggcatcg
      361 ccttggcgga acaccgcatc ccccgcgcga tatggcccga ggtgttccat caggctgtgc
      421 agcggcgaca gctcgggcaa gccgtagccg accatcgcgc atgcgctgga cagcgcgcag
      481 gtgcggcaga agtccggggc gccgaccgcc accggcggcg cctcgcgacg cactgcatga
      541 acggcatgct tggccaccgg gggcacctct ggcgcggcaa cgttcatatc gtacgcgaga
      601 accgcggccg ttccgcggca cggccgagat aggcgtcgaa gcacatcgcg acgacgcgca
      661 gcagcagccg gccccgcgcg gtcacccgga tggcgcgttc gtccagcgtc accaggccat
      721 cggcggcgag cgcatgcagg cgctccagct cggcggtgaa atactcggca aagcacacgc
      781 cgtactgcgc gccgaactcg accatgtcca gctcgccgtg gcacatgagc tggccgatga
      841 cctcgcggcg gatcaggtcg tcgcggctga gcgcaagccc gcgcgccacc ggcagccggc
      901 cgttgtcgag cgccgcgtag tagccggtca ggtcgcgcgc gctctggctg tagctgtcgc
      961 cgatgcggcc gatcgcgctc acacccaggc cgatgatgtc gcactcgccg tgggtcgaat
     1021 aaccctggaa attgcgctgc agcgtgccgg cgcgctgggc gctgaccagc tcgtcatcca
     1081 gcttggcgaa gtgatccatg ccgacgtacg cgtagccggc ggcgccgagc cgctccagtg
     1141 cgcgaccgat cagggccagc cgcgtcgccg ggctgggcag gtccgccgac tggatctggc
     1201 gctgcgcctt gaacatctcc ggcaggtgcg catacgcgta caccgccacg cgatcgggcg
     1261 cgaggccgat gacctcgtcc agcgtgcgct cgaagccggc cacggtctgc ttcggcaggc
     1321 cgtagatcag gtccacgctg gccgaacgga aaccgctggc cttggccgcc tccagcacct
     1381 cgcgcgtctg cgccacgctc tggatgcggt tcacggcttc ctgcaccgcc ggatcgaaat
     1441 cctggatgcc gacggaaata cggttgaacc cgagttcgcc gagcccggcg atgtacgccg
     1501 catcggcaaa ccgcgggtcg atctcgatac cgaactcgcg ctcgcctgcc ggcgcaaacg
     1561 ggaagtgccg cgccagcacc cccatcagct cgcgcatgcg cggcgtgtcg aggaaattcg
     1621 gcgtgccgcc gccgaaatgg agctgggtca cctggcggtc gcggtcgaac agcttcgcag
     1681 tcaactcgat ctcgcggtgc agccgttcga ggtagcgatc cgccttgccg acgtcgcggg
     1741 tgatgatgcg gttgcagccg cagtagaagc acgggctgac gcagaacggc acatgcacgt
     1801 agatcgacag cggacgcggg atcggctcct cgttcgaggc ctggatcacg gcgcgcagcg
     1861 cctgctcgcc gaagccggcg tggaactgcg gcgccgtcgg gtagctggtg tagcgcggcc
     1921 cggccacgtc gtagcgcgcg atcagcgcgg gatcgaactc ggggatctgg atggcgtggt
     1981 tcatggcgcc agtctcgaca ccacgcaaaa acctgcagtt gaccgccgtc aaatccgcaa
     2041 gcgtttgacg cggcaccaat tgccgcaggc cagccccgcc cgccgacggc ccggtggcgc
     2101 acccgcgatg tcccgcgcag gcaccggcac cgcccgctca acttttgcca tcacgaaccg
     2161 ataaccccga aggcgcagga cgtcgtcacc ccgggaatcg aacatgctgg taatggttgg
     2221 ctcgctgatc gtgctcgtct gcgtgctggg tggctacctg cttgctcacg gtcatctgct
     2281 cgccctctgg caaccctacg agttcatgat catcttcggc ggcgcgctcg gcgcgttcat
     2341 caccgccaac ccgaccaagg tgctgaaggc cgcggccagc gagatcggcg cgctgttcaa
     2401 ggggccgaag tacagcaagg aagacttcgt cgacctgctg tcgctgctgt acgacatctt
     2461 cggcgtgatg cgcaaggacg gcctgctcgg catggaggca catatcgaga acccgcactc
     2521 cagcgcggtg ttttccgcct acccgcggct gctgcgcgag cagcacctgg tcgagttcat
     2581 caccgactgc ctgcgcctca tcatcggcgg caacatggag ccgcaggagc tcgaggcgct
     2641 gctcgacgcc gaggtggaaa cccaccacgc cgaggccgaa gtgcccgcgc acgcggtagc
     2701 cacgatggcc gattcactgc ccggcttcgg catcgtcgcc gccgtgctcg gcatcgtcac
     2761 caccatggcc aacctgtccg acgacacctc cgaggtgggc atgcacgtgg cgggcgcgct
     2821 ggtcggcacc ttcctcggca tcctcctgtg ctacggcttc atcggcccgc tcggggcggc
     2881 gatggaggcg cgggcgcgcg aggatgggcg cgcgttcgaa tgcgtcaagg tcggcctgct
     2941 ggccaacctg cgcggctaca accccaaggt gtcggtggag ttcgcgcgca aggtgctgtc
     3001 ggccaacaag cggcccacgt tccaggacct cgagaatcac ctgaagggcg agcacgccgg
     3061 ggccggcgcg tgagcgacga cggccagcgc ccgctgatcg tcgtcaagcg ggtcaggaaa
     3121 ggcggcggcc accacggcgg cgcatggaag gtggcgtacg ccgacttcgt caccgcgatg
     3181 atggcgttct tcctggtgat gtggatcatc ggcgtcggca cccgccagca gaaggcggcg
     3241 atttccgaat acttccgcaa cccgagcgcc aaggccggca ccgccaccgt cgccccgccc
     3301 ggccagaacg gccccggcgg cgccagcgac gcgatgatca agctcggcgg cgcgatggat
     3361 ctctcgcacg gccccggcaa ggaccgccac aacggtccca ccggcgcgcc gaccaaggat
     3421 gagatcgacc aggccgcgcg cgcgcaggac aaggcgcggc tggaggagct gaagcaggag
     3481 ctgcacgcgg cgatcgagaa gagccaggcg ctggcgccat tcaaggacca gctgctgctc
     3541 gacatcacgc cggaaggcct gcgcatccag atcgtcgaca agcagaaccg gccgatgttc
     3601 gacctcggca gcgcgcacct caaggactac acccgcgcga tcctcgtcga cctcgccggc
     3661 ttcatcaaca aggtgcccaa ccgcatcagc atcaccggcc acaccgatga cgcgccgtac
     3721 agcagcgaca acggctacag caactgggag ctgtcgaccg accgcgccaa cgcggcgcgg
     3781 cgcgccctgc tggtcggcgg cctgcaggtc ggcaaggtgg cccgcgtcgt cggcctcgct
     3841 gcctcggtgc cgctcgaccg gcagaacccc gccgacccga tcaaccgtcg catcagcatc
     3901 atcgtgatga ccaagcaggc ggaaaaggcg gcgctgtcgc aggacgtcgt cagcgcgtcg
     3961 ccgccggcat cgtccaaggg cgtgccgacg gtgacggcgg gcccgatcgc cgcgccgccg
     4021 gcggccccgc cttccgcggg cgcgatcgtg cccaagctgc cggtgccgcc ggtgatccat
     4081 ccatcccagg gctgaaccgg cgcaagcgcg tcagtcgtgc gtgcgccgct tgcgccgccg
     4141 caggcgcagc caacgcagca ggccatacga caggcgcacc ttctcctgcc cgaccggcag
     4201 gccggcacgc gcgaagatcc acgaggattt gctgaacgcg atctgctgct ccgggtacac
     4261 gctgcggtgg ccgataatga ggtacgccgc cacgcaggcg ccggccacgt acagcgtcgc
     4321 gttggcgccg aacagctcga tgcccatcag gatcgccgcc atcggcgcgt tcgacgccgc
     4381 cgccactacc gccaccagcc cgaccgcagc gcccagcgcc ggcggcaggc cgagcagcgg
     4441 cgcaaacgcg ccgcccgcca ccgcacccat cacgaactgc ggggtgacga tgccgccgta
     4501 gaagcccgag cccagcgtga ccgccaccag cagcgccttc cacgcaaagc cgagccacgg
     4561 catcgcggcg ccgtgcagcg cctggtccat caccggcagg ctgaggccga tgtactgcac
     4621 gggcacggcg agcagcagca cggccacgac cacgccgccc agcatcggca ccagcggcgg
     4681 ccacaggcca tagcgctcgc gcaccgcgcc gaacacctcg cgcgacttgc gcatcagctc
     4741 gacgaaaacc caggccacgc caccgcacag cacgccgatc agcaccgtct tcaggaacag
     4801 cagctcggtg aagcggctgg aaaaatcgat ggcgtattgc ggatacggca cgccgaggta
     4861 ttgcgacacc tggaa
//
LOCUS       DASSVL010000558         2178 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_266942, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000558 DASSVL010000000
VERSION     DASSVL010000558.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2178)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2178)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2178
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_266942"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            164..1213
                     /gene="ruvB"
                     /locus_tag="VFM52_09785"
     CDS             164..1213
                     /gene="ruvB"
                     /locus_tag="VFM52_09785"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014404210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0009378 - four-way junction helicase
                     activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration DNA helicase
                     RuvB"
                     /protein_id="HET8765499.1"
                     /translation="MTEPRLTTPVSQLDDEALEATIRPRRFAEYLGQDAVREQLAIYI
                     EAARKRGGALDHVLIFGPPGLGKTTLSHVIANELGVSLRTTSGPVLERAGDLAALLTN
                     LQPNDVLFVDEIHRLSPAVEEVLYPAMEDFQIDIMIGEGPAARSIKLDLPPFTLVGAT
                     TRAGMLTAPLRDRFGIVQRLEFYSVAELTAIVRRSAKILGIACVLDGAQEIARRSRGT
                     PRIANRLLRRVRDYAEVRAGGEITLPAAQAALDMLKIDPDGLDELDRRLLGIIIESFD
                     GGPVGVESLAAALSEDRGTLEDVVEPYLIQQGFLVRTARGRMASAKAWRHLGLNPPVR
                     PAAVPDLFDGEHADG"
     gene            1206..1649
                     /gene="ybgC"
                     /locus_tag="VFM52_09790"
     CDS             1206..1649
                     /gene="ybgC"
                     /locus_tag="VFM52_09790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007507313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0047617 - acyl-CoA hydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tol-pal system-associated acyl-CoA thioesterase"
                     /protein_id="HET8765500.1"
                     /translation="MADAAPFRWPVRVYWEDTDAGGVVYHASYLRFLERARTEWLRAL
                     GVDQLALKQATGLAFLVARMELDFLRPALLDDELLATVVVKKHGAASILFGQTIERAD
                     GACLVRADVRVACVDIRRMRAAPIPADLVARFSPDPSFLRSAASP"
     gene            1646..>2178
                     /locus_tag="VFM52_09795"
     CDS             1646..>2178
                     /locus_tag="VFM52_09795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007808409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MotA/TolQ/ExbB proton channel family protein"
                     /protein_id="HET8765501.1"
                     /translation="MNGGFNVLELITGSSLPVKGVLLILLVFSFMSWVIIIRKYGQTK
                     QALENSESFEERFWSGGDLAQLFREVSHRGAGGGLETIFESGFREFARQRQRKTHDAR
                     AAIEGSERAMQVAGTREIGLLERNLEFLANVGSISPYVGLFGTVWGIMVSFQGLADVK
                     EATIATVAPGISEALVAT"
BASE COUNT          324 a          741 c          754 g          359 t
ORIGIN      
        1 gatcactgcg tgatcggctg gcggagcccc ggtcaggctt gacctgaccg gggcgagccc
       61 ttgccgggca ggattgcccg gcaagggctc aaaagggcaa ctagctcttg ctctggatgc
      121 gatgccgggc ccgctgcggc atccgacccg ccataatgcg cgcatgaccg aaccccgcct
      181 caccactccc gtctcccagc tcgacgacga ggcgctggaa gccacgatcc gcccgcgccg
      241 gtttgccgaa tacctcggcc aggacgcggt gcgcgagcag ctggcgatct acatcgaggc
      301 ggcgcgcaag cgcggcgggg cactggacca cgtgctgatc ttcggcccgc cggggctcgg
      361 caagaccacg ctttcgcacg tcatcgccaa cgagctgggc gtcagcctgc gcaccacgtc
      421 cgggccggtg ctggaacgcg ccggcgatct ggccgcgctg ctcaccaacc tgcagccgaa
      481 cgacgtgctg ttcgtggacg agatccaccg cctgtcgccg gcggtggagg aggtgctgta
      541 cccggcgatg gaggatttcc agatcgacat catgatcggc gaaggcccgg cggcgcgctc
      601 gatcaagctc gacctgccgc cgttcacgct ggttggggcg accacgcgcg cgggcatgct
      661 caccgcaccg ctgcgcgacc gcttcggcat cgtgcaacgg ctggagttct acagcgtggc
      721 ggagctgacc gcgatcgtgc gccgctcggc gaagattctc ggcattgcct gcgtgctcga
      781 cggcgcgcag gagatcgcgc gccgctcgcg tggcacgccg cgcatcgcca accgtctgtt
      841 gcgccgcgtg cgcgattacg ccgaggtgcg cgccggcggc gagatcacgc tgccggcggc
      901 gcaggccgcg ctcgacatgc tgaagatcga tccggatggg ctcgacgagc tcgaccgccg
      961 cctgctcggc atcatcatcg agagcttcga cggcggcccg gtcggcgtcg aatcgctggc
     1021 ggcggcgctc agcgaggatc gcggcacgct tgaggacgtg gtcgaaccgt accttatcca
     1081 gcagggtttc ctggtgcgca ccgcgcgagg ccgcatggcc agcgcgaagg cctggcggca
     1141 tctcggcctc aatccgccgg tgcgcccggc cgcggtgccg gacctgttcg acggggagca
     1201 cgccgatggc tgatgccgcg ccgttccgct ggccggtacg ggtgtactgg gaggacaccg
     1261 acgccggcgg cgtggtgtat cacgccagct acctgcgctt tctcgaacgt gcgcgcaccg
     1321 agtggctgcg cgcgctcggc gtcgaccagc tggcgctcaa gcaggccacc gggctggcgt
     1381 tcctggtggc ccggatggag ctggatttcc tgcgcccagc cctgctggac gatgaactgc
     1441 tggcaaccgt ggtcgtcaag aaacatggcg ctgccagtat cctgttcggc cagacgatcg
     1501 aacgcgcgga cggggcctgc cttgtccgcg ccgacgtgcg tgttgcctgc gtggatatac
     1561 ggcgcatgcg ggcggctcct atcccagccg atctcgtcgc acgtttttcc cctgacccca
     1621 gttttttgcg gagtgctgca agcccatgaa cggcggattc aatgttctcg aactgatcac
     1681 gggctccagc ctgccggtga agggcgtgct gctgatcctt ctggtgttct cgttcatgtc
     1741 gtgggtcatc atcatccgca agtacgggca gaccaagcag gcgctggaaa actccgagag
     1801 cttcgaggag cgcttctggt ccggcggcga cctggcccag ctgttccgcg aggtgagcca
     1861 tcgcggcgcc ggcggcgggc tggaaaccat cttcgaatcc gggttccgcg agtttgcccg
     1921 ccagcgccag cgcaagacgc acgacgcgcg cgcggcgatc gagggctccg agcgcgcgat
     1981 gcaggtggcc ggcacccgcg agatcggcct gctcgagcgc aacctggagt ttctcgccaa
     2041 cgtcggctcg atcagcccgt acgtgggcct gttcggcacg gtgtggggca tcatggtctc
     2101 gttccagggc ctggccgacg tcaaggaagc gacgatcgcc accgtcgcgc ccggcatctc
     2161 ggaggcgctg gtcgccac
//
LOCUS       DASSVL010000559         3946 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_733260, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000559 DASSVL010000000
VERSION     DASSVL010000559.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3946)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3946)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3946
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_733260"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1998
                     /gene="clpA"
                     /locus_tag="VFM52_09800"
     CDS             <1..1998
                     /gene="clpA"
                     /locus_tag="VFM52_09800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017354418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009368 - endopeptidase Clp complex
                     [Evidence IEA];
                     GO_function: GO:0004176 - ATP-dependent peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA];
                     GO_process: GO:0043335 - protein unfolding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit
                     ClpA"
                     /protein_id="HET8765502.1"
                     /translation="HVQSSGRKEVTGANVLVAIFGEKDSHAVYFLHQQEITRLDVVNY
                     ISHGIAKVGDEAAADPAANPEREGEDGGEARGNALAEFATNLNERAAQGRIDPLIGRA
                     DEIERTIQVLCRRRKNNPLYVGDAGVGKTALAEGLAKRIVDGQVPEVLENATIWALDL
                     GALVAGTKYRGDFEKRLKNVIAQLKKQPDAILFIDEIHTIIGAGSASGGTMDASNLIK
                     PMLASGELRCIGSTTFQEYRGVFEKDRALARRFQKIDVVEPTVADTIEILKGLRSRFE
                     EHHNVIYTNEALKAAVDLAVKHLPDRLLPDKAIDVIDEAGARQRLLPPEQRTGKVDVA
                     EVEYIVAKMARIPPKQVSASDRDVLRNLERNLKMVVFGQDGAIEALASAIKMARSGLA
                     DPAKPIGSFLFAGPTGVGKTEVTRQLALQLGIEFIRFDMSEYMEPHSVSRLVGAPPGY
                     VGFDQGGLLTEAVTKHPHAVLLLDEIEKAHPDVYNILLQVMDRGVLTDTNGREANFKN
                     VIVVMTTNAGAAQAARRSIGFVAQSHQTDSMEVIRRAFSPEFRNRLDAIIQFNALDFE
                     HILRVVDKFLIELEAQLTEKRVSLDVDPEARRWLAEHGFDPQMGARPMARVIQDKVKR
                     PLADELLFGKLAEGGVVRLSVADGQLKVDCKAAEKLPAVVE"
     gene            complement(2099..2317)
                     /gene="infA"
                     /locus_tag="VFM52_09805"
     CDS             complement(2099..2317)
                     /gene="infA"
                     /locus_tag="VFM52_09805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011217896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003743 - translation initiation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006413 - translational initiation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-1"
                     /protein_id="HET8765503.1"
                     /translation="MAKDDVIEMEGTVTETLPNTMFRVELENGHVVIAHISGRMRKHY
                     IRILTGDKVKIEMTPYDLSKGRITYRMK"
     gene            complement(2421..2696)
                     /locus_tag="VFM52_09810"
     CDS             complement(2421..2696)
                     /locus_tag="VFM52_09810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007508581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyhydroxyalkanoic acid system family protein"
                     /protein_id="HET8765504.1"
                     /translation="MPTIAIHRPHRLPLARARVVVDEVATRMREKFGLAGDWQGDTLH
                     FSRPGVNGSIAISAEAIDVRAELGLLLAPLKGVVEAEIRHKLDEHFA"
     gene            2790..3554
                     /locus_tag="VFM52_09815"
     CDS             2790..3554
                     /locus_tag="VFM52_09815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019466731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051219 - phosphoprotein binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FHA domain-containing protein"
                     /protein_id="HET8765505.1"
                     /translation="MRIEFSHSARDDFLWTDAPLRVGSAVDNDLVLAATQAAPQHLRI
                     EQDRRGWVLQVLPGALRVYVNARPVRERALLRAGDMLSVGDCRMRLCADISPAERELP
                     ACVPEARDSVALRARAGAYSGRVLAIGDGIELGPLGRWPLDLPQGENAGFKLAWQSGR
                     LVLEATAASAKYPLRVNGVAVSHAVLQPGDQLSLGPHRFVLDAPGMRLDPAAPAPVAP
                     EPEVVQPAGPHGEMGWLILTAVLLALAIAWALWLRF"
     gene            3632..>3946
                     /locus_tag="VFM52_09820"
     CDS             3632..>3946
                     /locus_tag="VFM52_09820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007508577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HET8765506.1"
                     /translation="MSQVWNFSAGPAALPREVLERAQRELLDWDGSGMSIMEQSHRGK
                     RFIAMAERVEADVRELAAIPDDYAVLFLQGGATQHFAQIPMNLAGPGASADYIINGHW
                     GAK"
BASE COUNT          641 a         1284 c         1406 g          615 t
ORIGIN      
        1 cacgtgcaat cctcgggccg gaaggaagtg accggggcca acgtgctggt cgcgatcttc
       61 ggcgagaagg attcgcatgc ggtgtatttc ctgcaccagc aggagatcac ccggctcgac
      121 gtggtcaact acatttcgca cggcatcgcc aaggtcggcg acgaggcggc cgccgacccg
      181 gcggcgaacc cggagcgcga gggcgaggat ggcggcgagg cgcgcggcaa tgcgctggcc
      241 gagtttgcga ccaacctcaa cgagcgcgcg gcgcagggca ggatcgaccc gctgatcggc
      301 cgtgccgacg agatcgagcg caccatccag gtgctgtgcc ggcggcgcaa gaacaacccg
      361 ctgtacgtcg gcgatgccgg cgtcggcaag accgcgctgg ccgaagggct ggccaagcgc
      421 atcgtcgacg gccaggtgcc cgaggtgctg gaaaacgcca cgatctgggc gctcgacctg
      481 ggcgcgctgg tggccggcac caagtaccgc ggcgatttcg agaagcgcct gaagaacgtg
      541 atcgcgcagc tcaagaagca gccggacgcg atcctgttca tcgacgagat ccacaccatc
      601 atcggcgccg gctcggcgtc gggcggcacc atggacgcgt cgaacctgat caagccgatg
      661 ctggcgtccg gcgagctgcg ctgcatcggc tcgaccacgt tccaggaata ccgcggcgtg
      721 ttcgagaagg accgcgcgct ggcccgccgc ttccagaaga tcgacgtggt cgaaccgacg
      781 gtggccgaca ccatcgagat cctcaagggc ctgcgctcgc gcttcgagga gcaccacaac
      841 gtcatctaca ccaacgaggc gctgaaggcc gcggtggacc tggcggtgaa gcacctgccg
      901 gatcgcctgc tgccggacaa ggcgatcgac gtgatcgacg aggccggcgc gcgccagcgc
      961 ctgctgccgc cggagcagcg caccggcaag gtcgacgtgg ccgaggtcga gtacatcgtg
     1021 gcgaagatgg cgcgcatccc tcccaagcag gtgtcggcgt ccgaccgcga cgtgctgcgc
     1081 aacctcgagc gcaacctcaa gatggtggtg ttcggccagg atggcgcgat cgaggcgctg
     1141 gcctcggcga tcaagatggc gcgctccggc ctggccgacc cggccaagcc gatcggcagc
     1201 ttcctgttcg ccggcccgac cggcgtgggc aagaccgaag tcacgcgcca gctggcgctg
     1261 cagctcggca tcgagttcat ccgcttcgac atgtccgagt acatggagcc gcattcggta
     1321 tcgcggctgg tcggtgcgcc gccgggctac gtcggcttcg accagggcgg cctgctgacc
     1381 gaggcggtga ccaagcaccc gcacgcggtg ctgctgctcg acgagatcga gaaggcgcac
     1441 ccggacgtct acaacatcct gctgcaggta atggatcgcg gtgtgctgac cgacaccaac
     1501 ggacgtgagg ccaacttcaa gaacgtgatc gtcgtgatga ccaccaacgc cggcgcggcg
     1561 caggcggcgc ggcgcagcat cggcttcgtg gcgcagagcc accagaccga ttcgatggag
     1621 gtgatccgcc gcgccttctc gccggagttc cgcaaccggc tggacgcgat catccagttc
     1681 aacgcgctgg acttcgagca catcctgcgg gtggtcgaca agttcctgat cgagctggaa
     1741 gcgcagttga ccgagaagcg cgtgagcctc gacgtcgatc cggaggcgcg gcgctggctg
     1801 gccgagcatg gcttcgaccc gcagatgggc gcgcggccga tggcgcgggt gatccaggac
     1861 aaggtgaagc ggccgctcgc cgatgagctg ctgttcggca agctggccga gggcggcgtg
     1921 gtccggctga gcgtggccga tggccagctg aaggtcgact gcaaggcggc agagaagctg
     1981 ccggccgtgg tcgagtaagg cggacggttg ggcaaagcaa aggcggcgcg tgggcgccgc
     2041 ctttgtcatg tccggtgccg ccgcctcgcg ggcgcggcag ccggcaacac cgccgcgctt
     2101 atttcatgcg gtaggtgatg cggcccttgc tcaggtcgta cggggtcatt tcgatcttga
     2161 ccttgtcgcc ggtgaggatg cggatgtagt gcttgcgcat gcgccctgag atgtgggcga
     2221 tgaccacgtg cccgttctcc agctccacgc gaaacatggt gttgggcagg gtctcggtga
     2281 ccgtgccttc catttcgatg acgtcgtctt tggccatgtg ttccgggtcg cgcgcagccg
     2341 gattgactgc gtaagctgcc aagtatgcca cgcgcgctgc cgtcggcaaa atgccagcga
     2401 cggtcgggcc aaggccaccg tcaggcgaaa tgttcgtcca gcttgtgccg tatttccgcc
     2461 tcgaccacgc ctttgagcgg ggccagcagc aggccgagtt cggcgcgcac gtcgatcgct
     2521 tcggcgctga tcgcgatcga gccgttcacg ccggggcgcg agaagtgcag ggtgtcgcct
     2581 tgccagtctc cggcaagccc gaacttttcg cgcatccgcg tcgccacctc gtcgacgacg
     2641 acgcgcgccc gtgcgagtgg caggcggtgc gggcgatgga tggcgatcgt gggcatgggc
     2701 gttccggcaa agtcgcgcat catagatcgc ctgcgcgatg gcgtgcacca cgcatgctag
     2761 agtcgtgcgg tcaatggact ggtaccgcaa tgcgcatcga gttttcccat tccgcccgcg
     2821 atgatttcct gtggacggac gcgccgctgc gggtgggcag tgcggtcgac aacgacctgg
     2881 tactcgccgc gacccaggcc gcgccgcagc acctgcgcat cgagcaggat cgccgcggat
     2941 gggtgctgca ggtgctgccg ggagcgctgc gcgtctacgt caatgcgcga ccggtgcgcg
     3001 agcgtgccct gctgcgcgcc ggcgacatgc tcagcgtcgg cgattgccgc atgcgcctgt
     3061 gtgccgacat ttcgccggcc gagcgggagt tgcccgcctg cgtacccgag gcacgtgaca
     3121 gcgtggcgct gcgggcgcgg gccggcgcct attccggtcg cgtgctggcg atcggtgacg
     3181 gcatcgagct gggcccgctc gggcgctggc cgctcgacct gccgcaaggc gagaacgccg
     3241 gcttcaagct cgcctggcag tccggccggc tggtgctcga agccacggcg gcgtcggcga
     3301 aatatccatt gcgggtcaac ggcgttgccg tcagccacgc cgtgctgcag ccgggcgacc
     3361 agctaagcct ggggccacac cggttcgtgc tggatgcgcc cggcatgcgg ctggatccgg
     3421 cggcgccggc gccagtcgcg cccgagccgg aagtcgtcca gccagccggc ccacacggtg
     3481 agatgggctg gctgatcctc accgccgtcc tgttggcgct tgccatcgcc tgggcgctgt
     3541 ggctgcgatt ctgagtcgcg ccaagcccca ttgacgatgc catgctgcgg cgcggcataa
     3601 tgccgcgagt cgcaaccacg gaggtcgagc ggtgagccag gtgtggaact tcagtgcggg
     3661 cccggcggcg ctgccgcggg aagtcctcga gcgcgcccag cgcgagttgc tcgactggga
     3721 cggcagcggc atgtcgatca tggaacagtc gcatcgcggc aagcgcttca tcgcgatggc
     3781 cgagcgcgtc gaggccgacg tgcgcgagct ggcggcgatc cccgacgact acgcggtgct
     3841 gttcctgcag ggcggcgcaa cccagcattt cgcgcagatc ccgatgaacc tggccggccc
     3901 gggtgccagt gccgactaca tcatcaacgg ccattggggc gccaag
//
LOCUS       DASSVL010000560         2524 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_973339, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000560 DASSVL010000000
VERSION     DASSVL010000560.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2524)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2524)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2524
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_973339"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            1..135
                     /locus_tag="VFM52_09825"
                     /pseudo
     CDS             1..135
                     /locus_tag="VFM52_09825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611376.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
     gene            complement(266..1060)
                     /gene="istB"
                     /locus_tag="VFM52_09830"
     CDS             complement(266..1060)
                     /gene="istB"
                     /locus_tag="VFM52_09830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007686288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS21-like element helper ATPase IstB"
                     /protein_id="HET8765507.1"
                     /translation="MSDTPQVLLAHHLKTLKLPTFLREYDKVARQCAAEGVDYPRFLL
                     RLAEQELIDRERRMVERRIKAAKFPTVKSLDSFDFAALPSLNKALVMELARCEYIERH
                     ENVIALGNSGTGKSHIALGLGLAACQKGLSVGFTAAAAIVHELMEARDEKRLLRLQRQ
                     LAAYKLLIVDELGYVPLSQTGAELLFEVFSQRYETGSTIVTSNLPFDEWTSVFGAERL
                     TGALLDRLTHHVHILEMNGDSYRLAHSKRRSRRPRTDATSDAATQD"
     gene            complement(1057..>2524)
                     /gene="istA"
                     /locus_tag="VFM52_09835"
     CDS             complement(1057..>2524)
                     /gene="istA"
                     /locus_tag="VFM52_09835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_032490499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="IS21 family transposase"
                     /protein_id="HET8765508.1"
                     /translation="YAVQVEGLSERAAARRFGIDPRTVAKMMRFSVPPGYRRTKPPVK
                     PRLGPFLATIDGILAEDKGRPKKQQHTAKRIFERLRDEHGYAGGITVVKDYVAGWRQR
                     AREMFVPPAHAPGHAQVDFGEAIGIIGGVERKVHFFAFDLPHSDACFVAAYPAETKEA
                     FCDGHVKAFAFFGGVPKSILYDNTRIAVARILGDGVRQRTQVFSELQSHYLFEDRFGR
                     PGKGNDKGKVEGLVGYARRNYMVPVPAFDSFEALNAHLLECCRKRMRERLRGHAETIG
                     ERLERDLAALRRPLPPPYDACEKVPATVSSLSLVRYRRNDYSVPTCFGHRQVMVRGYV
                     HEVVIACGTEIIARHPRSYEREDFVFDPLHYLSLIERKINALDQAAPLAGWQLPEAFA
                     TLRRLLEARMGKAGKREFVQALRLMEAFPIEAVTGAVGDAIARGAVGFDAIKHLVLCR
                     IERRPPRLDMSIYPYLPRAMVATTSARSYMALLAGAGS"
BASE COUNT          414 a          852 c          843 g          415 t
ORIGIN      
        1 gccacgagat cacgtttaaa aaaagtcccg cacgcggccg agcaggatcg gcctgatgtc
       61 gccgccgcgc gggccgagtt gaaggccgag cagcctgcac tcagggcttc gcgtctcgtc
      121 ttcatcgacg agaccgcagt gacgaccaag atgacccgcc tgtcaacgcc ggagagaaat
      181 tgcatcggcg ggccggagca aaaatccatc gctacggcga gcaagaaggc ccccgatatc
      241 gggggccttc ttgcttttgg cggcctcagt cctgggtggc ggcgtcggag gtcgcgtctg
      301 ttcggggccg gcgtgatcgg cgcttggagt gagcgaggcg gtagctgtcg ccgttcatct
      361 cgaggatgtg gacgtggtgg gtcaaccggt cgaggagcgc gccggtcagc cgctcggcgc
      421 cgaacacgga tgtccactcg tcgaagggca ggttgctggt gacgatggtg gagccggtct
      481 cgtagcgctg ggagaacact tcgaacagaa gctcggcgcc ggtctgcgac agcggcacgt
      541 agccgagctc gtcaacgatc agcagcttgt aggcggcgag ctggcgctgc aggcgcagga
      601 gccgcttttc gtcgcgcgcc tccatcagct cgtgcacgat ggcggccgcg gccgtgaagc
      661 cgaccgacag tcctttctga caggcggcga gccccagccc cagcgcgatg tggctcttgc
      721 cggtgccgga gttgccaagg gcgatgacgt tctcgtgccg ctcgatgtac tcgcagcggg
      781 cgagttccat caccagtgcc ttgttcaggg acggcagggc cgcaaagtcg aagctgtcca
      841 ggctcttcac cgtcgggaac ttcgccgcct tgatgcgacg ctcgaccatg cgccgctcgc
      901 ggtcgatcag ctcctgctcg gccaggcgca gcaggaagcg cggatagtcg acgccctcgg
      961 cggcgcactg gcgcgccacc ttgtcgtact cgcgcaggaa ggtcggcagc ttcagcgtct
     1021 tcaggtggtg ggcgagcagg acctggggtg tgtcgctcat gatcccgctc ccgccagcag
     1081 ggccatgtag gagcgtgccg aggtcgtggc caccatcgcc ctgggcaagt agggatagat
     1141 gctcatatcc aggcgcggcg ggcgccgctc gatgcggcac agcaccaggt gcttgatggc
     1201 gtcgaagccg acggcgccac gggcgatggc gtcaccgacg gcaccagtga cggcttcgat
     1261 cgggaacgcc tccatcagcc gcagcgcctg cacgaactcg cgcttgcccg ccttgcccat
     1321 gcgcgcctcc agcagccggc gcagggtggc gaacgcctcc ggcagctgcc agccggccaa
     1381 cggtgcggct tggtccagag cgttgatctt cctctcgatc agcgagaggt agtgcagcgg
     1441 gtcgaacacg aagtcctcgc gctcatagga gcgcggatgt cgcgcgatga tctccgtgcc
     1501 gcaggcgatc accacctcgt gcacgtagcc gcgcaccatc acctgccggt ggccaaagca
     1561 cgtcggcacc gagtagtcgt tgcgccggta gcgcaccagc gacagcgagg agacggtggc
     1621 cggcaccttc tcgcaggcgt catagggtgg cggcagcggc ctgcgcagag ccgccagatc
     1681 ccgctcgagc cgctcgccga tggtctcggc atgcccacgc aggcgctccc tcatgcgctt
     1741 cctgcagcac tcgagcagat gggcgttgag tgcctcgaag ctgtcaaacg ccggcactgg
     1801 caccatgtag ttccggcgcg catagccgac cagtccctcg accttgccct tgtcgttgcc
     1861 cttgccagga cggccgaacc ggtcctcgaa caggtaatgc gattgcagct cgctgaacac
     1921 ctgcgtgcgc tgtcgtaccc cgtcgcccag aatgcgggcc accgcgatcc tggtgttgtc
     1981 gtagaggatc gacttcggta cgccgccgaa gaaggcgaac gccttcacgt ggccgtcgca
     2041 gaaggcctcc ttggtctcgg ctggataggc cgccacgaag caggcgtccg agtgcggcag
     2101 gtcgaaggcg aagaagtgga ccttgcgctc caccccgccg atgatgccga tcgcctcgcc
     2161 gaagtcgacc tgggcgtgcc ccggcgcatg cgccggcggc acgaacatct cccgcgcccg
     2221 ctgccgccag ccggcaacgt agtccttgac gaccgtgatg ccgcccgcgt agccatgctc
     2281 gtccctcagc cgctcaaaga tccgcttggc cgtgtgctgc tgcttcttcg gccggccctt
     2341 gtcctcggcc aggataccgt cgatggtggc gaggaacgga cccagccgcg gctttaccgg
     2401 cggctttgtg cgccggtagc ccggcggcac cgagaaccgc atcatcttgg cgaccgtcct
     2461 cggatcgatc ccaaaccgcc gagccgccgc ccgctcgctc aaaccctcga cctgaaccgc
     2521 gtac
//
LOCUS       DASSVL010000561         3218 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_888777, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000561 DASSVL010000000
VERSION     DASSVL010000561.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3218)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3218)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3218
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_888777"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2243)
                     /locus_tag="VFM52_09840"
     CDS             complement(<1..2243)
                     /locus_tag="VFM52_09840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008215257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HET8765509.1"
                     /translation="MTGLSNVATRKPLYAALAQAIWSLAGGVPGVAYAAQPETASTAA
                     PATPAPQTADGTADQAKAEKNKAVKKKTGASAEKATQLQGVVVTSYRQSIDQNLQDKR
                     DSNAIVEVINAQNIAQFPAKNIADALAHVPGVVITRESGEGKTVSIRGLSPELTLTEL
                     NGNYVASADTSAGLTRSFNYTLMPANMFSDIKLYKSLEARLDEGGIGGNVDLRTRRPL
                     EMKANDGFVSVNAAGSDNSGKITPQASALWSWKNKDETFGVLLAGTYQKRRDVDYTAN
                     ASSWHWWSDNCTDFTTCTAPATDVHGNPYGPDVAPNIALWPGGGVVDQSGRQYSGYWM
                     PQQFSTSRNQLDLKTKGVQATMQFKPSDHFLLTGNYFRFQRQQTQITNTLEVPEWGLP
                     SNHNFDDQQGRLLAPNGLTFDPSGTVVTGANYVLPPAGTGCNALVNPSTGATRQPVDV
                     CSTEIPWLNGNYSVEKATSQTLNLEGEWDNGGDLSGTFNVGRTWATGGPSIELGMAAK
                     PRNFVNGQWVDGSNGAAWTLNGKPTITAAPNVLQNMLAGEGQVDLGSTGSGMVNTSTS
                     QNFAQADFTWAFDNGWLQSLQFGAKYRDNHAEQQSNELRWYCKGTTSQFQTCDPNAGQ
                     LPAGFLLPTMLDGHSEAYNDSVFPAINFPAYYNHLNATYDRVLYNHPENRSSIQEKIS
                     AAYVQANFDTGTLRGNVGLRFVSTQQDLTVADEITTNNAVYYHDANGNILICPASGVN
                     AGGGPCAP"
     gene            complement(2832..>3218)
                     /locus_tag="VFM52_09845"
     CDS             complement(2832..>3218)
                     /locus_tag="VFM52_09845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8765510.1"
                     /translation="DPHAGDMIDVHDYQGPGLPSPDATRAAIDGEHGGMTLGVPGHVW
                     PNTPINPYGAVKDRAALDAGYVANTRVLLDQGVPKGMSGSVYTQITDVEGEHNGLFTY
                     DREVEKVDEAKVRAINTAVIRAGARP"
BASE COUNT          462 a         1044 c         1070 g          642 t
ORIGIN      
        1 ggtgcgcacg gaccgccgcc ggcgttcacg ccgctggccg ggcagatcag gatgttgccg
       61 ttcgcgtcgt ggtagtacac cgcgttgttg gtggtgatct cgtcggcaac ggtcagatcc
      121 tgctgggtgc tgacgaagcg caggccgacg ttgccgcgca gcgtgccggt gtcgaagttg
      181 gcctgcacgt aggccgccga gatcttctcc tggatggacg accggttctc cgggtggttg
      241 tagagcacgc ggtcgtaggt cgcgttgaga tggttgtagt acgccgggaa attgatcgcc
      301 gggaagacgc tgtcgttgta cgcctcgctg tggccgtcga gcatcgtcgg cagcaggaag
      361 ccggccggaa gctggccggc attcgggtcg caggtctgga actgcgatgt ggtgcccttg
      421 cagtaccagc gcagctcgtt gctctgctgc tcggcatggt tgtcgcggta cttcgcgccg
      481 aactgcagcg actgcagcca gccgttgtcg aaggcccagg tgaaatcggc ctgcgcgaag
      541 ttctgcgagg tgctggtgtt gaccatgccg gaaccggtcg agccgaggtc cacctgcccc
      601 tcgcccgcca gcatgttctg cagcacattc ggcgccgcgg tgatggtcgg cttgccgttc
      661 aacgtccacg ccgcgccatt gctgccatcc acccactggc cgttgacgaa gttgcgtggc
      721 ttggccgcca tgcccagctc gatcgacgga ccacccgtcg cccaggtgcg gccgacgttg
      781 aaggtgccgc tgaggtcgcc gccgttgtcc cactcgccct cgaggttcag ggtttgagag
      841 gtggccttct cgaccgagta gttgccgttg agccacggga tctcggtgga gcagacgtcc
      901 accggttgcc gcgtcgcgcc ggtggacggg ttgaccagcg cattgcagcc cgtgccggcc
      961 ggcggcagga catagttcgc gccggtgacg acggtgcccg acggatcgaa ggtcaagccg
     1021 ttgggcgcaa gcagccggcc ctgctggtcg tcaaagttgt ggttgctggg caggccccac
     1081 tcgggcactt cgagcgtgtt ggtgatctgg gtctgctgcc gctggaagcg gaagtagttg
     1141 ccggtcagca ggaaatggtc gctgggcttg aactgcatcg tggcctgcac gcccttggtc
     1201 ttcaggtcga gctggttgcg gctggtggag aactgctgcg gcatccagta gcccgaatac
     1261 tgccggccgg actggtcgac cacgccaccg cccggccaca gcgcgatgtt gggcgccacg
     1321 tcggggccgt acgggttgcc gtgcacgtct gtggccggcg cggtgcaggt cgtgaagtcg
     1381 gtgcagttgt ccgaccacca gtgccaactc gacgcattgg cggtgtagtc gacgtcccgc
     1441 cgcttctggt aggtgcccgc gagcaggacg ccgaaggtct cgtccttgtt cttccacgac
     1501 cacagcgccg aggcctgggg cgtgatcttg ccgctgttgt cggaacccgc ggcgttgacg
     1561 gacacgaagc cgtcgttcgc cttcatctcc agcgggcgcc gcgtgcgcag gtccacgttg
     1621 ccgccgatgc cgccttcgtc caggcgcgcc tccaggctct tgtagagctt gatgtccgag
     1681 aacatgttgg ccggcatcag cgtgtagttg aacgaacgcg tcagcccggc cgaggtatcg
     1741 gccgaggcca cgtagttgcc gttcaactcg gtcagcgtca gctcgggcga caggccgcgg
     1801 atgctgaccg tcttgccctc gccggactcg cgcgtgatga ccacgccggg cacgtgggcc
     1861 agggcgtcgg cgatgttctt ggccggaaac tgcgcgatgt tctgcgcgtt gatgacctcg
     1921 acgatggcgt tggagtcgcg cttgtcctgc aggttctggt cgatcgactg ccggtagctg
     1981 gtgaccacca cgccctgcaa ctgggtggcc ttctcggccg acgcgccagt cttcttcttg
     2041 accgccttgt tcttctcagc cttggcttgg tccgccgtgc cgtcggcggt ctgcggtgcc
     2101 ggcgtcgccg gcgcggccgt ggaagccgtt tccggttgcg cggcgtacgc aacgcccggc
     2161 acgccgccgg caagtgacca aatcgcctgg gcgagtgcgg cgtacagcgg cttccgggtg
     2221 gcaacgttcg acaaaccagt catgttcttg atccccattt gcgttatccc catgtgacgg
     2281 cgtgcgtttc ccacacatcg atgcagcact cgtgtcccgc tttgcggtag cggcatgtgg
     2341 tggcggcgcc ggcccggacc cgtgtctggt gcccgctgtc gaacccggcc gaccacttgc
     2401 cacgaccctt cccgcgacgt gccctgtcct ccgttctccc gtcctgcccc tggattcggc
     2461 gcccctgttc gccaccgatc caaggtttgc aacgacggcc tgcgggtgat ctccgtgcac
     2521 cactttccgc tgaatcaatc cattggtttt agatcgatct aaaaccaacg tgtcaattac
     2581 tgcaccaaag acgcagcgtg tcacgctgca ctgcagaaaa actttccgcg atatccaccc
     2641 gccagttttc ggcggaaaag ttgcccctgg tgcggggcaa ctcctgaaga cccggtcggc
     2701 gggtcaatcc atcgagcctg tttcgccacc ttcccggttg cctgttgcgt caacgtggat
     2761 gaatcgatcc agtacaagca ccacgcatgg gatgccgacc ggtgccctcg gcgccgacat
     2821 cccaccaagc gtcaaggccg cgcgccggca cggatcaccg ccgtgttgat cgcccgcacc
     2881 ttcgcctcgt ccaccttctc gacttcgcgg tcataggtga acaagccgtt gtgctcgccc
     2941 tcgacgtcgg tgatctgggt gtagacgctg cccgacatgc ccttgggcac gccctggtcg
     3001 agcagtacgc gggtattggc gacgtagccg gcgtccagcg cggcgcgatc cttcaccgcg
     3061 ccatacgggt tgatcggcgt gttgggccag acgtggccgg ggacgccgag ggtcatcccg
     3121 ccatgctcgc cgtcgatcgc cgcgcgcgtg gcgtccggac tgggcaggcc aggcccctgg
     3181 taatcgtgca cgtcgatcat gtcgccggca tgcgggtc
//
LOCUS       DASSVL010000562         2205 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_380274, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000562 DASSVL010000000
VERSION     DASSVL010000562.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2205)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2205)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2205
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_380274"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..505)
                     /gene="guaA"
                     /locus_tag="VFM52_09850"
     CDS             complement(<1..505)
                     /gene="guaA"
                     /locus_tag="VFM52_09850"
                     /EC_number="6.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017460764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003922 - GMP synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006177 - GMP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing GMP synthase"
                     /protein_id="HET8765511.1"
                     /translation="MTSIHSDKILILDFGAQYTQLIARRVRELGVYCEIWAWDHDPAE
                     IAAFGAKGIILSGGPESTTEPGAPAAPQTVFDAGVPILGICYGMQTMAAQLGGATVAA
                     DQREFGHACVDIGADSQLFAGLSDHADAHRLDVWMSHGDHVSRIPPGFTVTGSTDRIP
                     VAVMENKA"
     gene            complement(662..2122)
                     /gene="guaB"
                     /locus_tag="VFM52_09855"
     CDS             complement(662..2122)
                     /gene="guaB"
                     /locus_tag="VFM52_09855"
                     /EC_number="1.1.1.205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007080972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003938 - IMP dehydrogenase activity
                     [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IMP dehydrogenase"
                     /protein_id="HET8765512.1"
                     /translation="MRILAEALTYDDVFLVPGHSNVLPRDVDTSTRFTRGLRLNIPIV
                     SAAMDTVTEARLAITMAQQGGIGIIHKNMTLEQQAAEVRLVKKFEAGVIRSPFTVGPE
                     TSIRDVLKLTHAHNISGVPVVEGGKLVGIVTSRDMRFERKPDDPVRNIMTRQERLVTV
                     KEGASQDEVLQLLHKHRIEKVLVVNDAFELRGLITVKDIQKARDNPHAAKDSHDTLLV
                     GAAVGVSGDTEQRVEALVEAGVDVIVVDTAHGHSQGVIDRVAWVKRHYPSVQLIAGNI
                     VTGDAALMLRDAGADAVKVGVGPGSICTTRVVAGVGVPQITAVDMVASALKDDIPLIA
                     DGGIRYSGDIPKALAAGASSVMLGSMFAGTEECPGEVELFQGRSYKSYRGMGSIAAMQ
                     KGSKDRYFQEDEVDAEKLVPEGIEGRVPYRGPLRNIIHQLLGGLRASMGYLGAATIDD
                     VRKQAQFVKVTSAGVTEAHPHDIQITKEAPNYRLNS"
BASE COUNT          318 a          733 c          756 g          398 t
ORIGIN      
        1 tggctttgtt ttccatcacc gcgaccggga tgcgatccgt gctaccggtg acggtgaagc
       61 ccggcggaat cctcgagacg tggtcgccgt ggctcatcca tacgtcgagc cggtgcgcgt
      121 cggcatggtc ggatagcccg gcgaacaatt gactgtccgc gccgatgtcc acgcaggcgt
      181 ggccgaactc gcgctggtcg gccgccaccg tcgcgccgcc cagctgcgcg gccatggtct
      241 gcatgccgta gcagatgccg aggatcggca cgccggcgtc gaacacggtt tgcggcgccg
      301 cgggtgctcc cggctcggtg gtcgattccg gcccaccgga aaggatgatg cccttcgcgc
      361 cgaatgcggc gatttccgcc gggtcgtgat cccaggccca gatttcgcag tacaccccca
      421 gttcgcgcac gcggcgcgcg atgagctgcg tgtactgcgc gccgaagtcc aggatgagga
      481 tcttgtcgct atggatgctg gtcatggctt tccgctccct ctcccccgcc ggcgcagccg
      541 tcgggggaga gggctggggt gaggggtagt agtgggtgtg gttggtggtc aagagcgaaa
      601 agcccccctc accctgccct ctcccccaag ctgcgcttgg gggagagggc tacagatgcg
      661 ctcaggaatt cagccggtaa ttcggcgctt ccttggtgat ctggatgtcg tgcgggtgcg
      721 cctcggtcac gccggccgag gtcaccttga cgaactgcgc ctgcttgcgc acgtcgtcga
      781 tcgtcgccgc gccgagataa cccatcgatg cgcgcaggcc gccgagcagc tggtggatga
      841 tgttgcgcag cgggccgcgg tacggcaccc ggccttcgat gccttccggc accagcttct
      901 cggcgtccac ttcgtcttcc tggaagtagc ggtccttgga gcccttctgc atcgcggcga
      961 tcgagcccat gccccggtag ctcttgtacg agcggccctg gaacagctcc acttccccgg
     1021 ggcactcctc ggtgccggcg aacatcgagc cgagcatcac gctggaagcg ccggccgcca
     1081 aggccttcgg aatgtcgccc gagtagcgga tgccaccgtc ggcgatcagc gggatgtcgt
     1141 ccttgagcgc gctggccacc atgtccaccg cggtgatctg cggcacgccc acgccggcga
     1201 ccacgcgcgt ggtgcagatc gagcccggac ccacgccgac cttcaccgcg tcggcgccgg
     1261 cgtcgcgcag catcagcgcg gcatcgccgg tgacgatgtt gccggcgatc agctgcacgc
     1321 tcggatagtg ccgcttcacc catgccacgc ggtcgatcac gccttgcgag tggccgtgcg
     1381 cggtatcgac cacgatcacg tccacgccgg cctcgaccag cgcttcgaca cgctgctcgg
     1441 tgtcgccgct cacgccgacg gcggcgccca ccagcagggt gtcgtggctg tccttcgcgg
     1501 cgtgcggatt gtcgcgggcc ttctggatgt cctttaccgt gatcaggccg cgcagctcga
     1561 atgcgtcgtt gaccaccagc accttctcga tgcggtgctt gtgcaggagc tgcagcacct
     1621 cgtcctggct ggcgccttcc ttcaccgtca ccagccgttc ctggcgggtc atgatgttgc
     1681 gcaccgggtc gtcgggcttg cgctcgaagc gcatgtcgcg gctggtgacg atgccgacca
     1741 gcttgccgcc ctccaccacc ggcacgccgg agatgttgtg cgcgtgggtg agcttgagca
     1801 cgtcgcggat ggacgtctcc gggccgacgg tgaacgggct gcggatgacg ccggcctcga
     1861 acttcttcac caggcgcact tcggcggcct gctgttcgag cgtcatgttc ttgtggatga
     1921 tgccgatgcc gccctgctgc gccatggtga tggccagccg cgcctcggtc acggtgtcca
     1981 tcgcggcgga gacgatgggg atgttcaggc gcaggccgcg ggtgaagcgg gtggaggtgt
     2041 ccacgtcgcg cggcagcacg ttggagtggc cgggaacgag gaagacgtcg tcgtaggtga
     2101 gagcctcggc gagaatgcgc atggaagaaa gccccgcggc aaagagagga ttatacgcgg
     2161 cgccgcagca tcctcgccag ttcggcggct gaatggccct ggagc
//
LOCUS       DASSVL010000563         2983 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_648379, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000563 DASSVL010000000
VERSION     DASSVL010000563.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2983)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2983)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2983
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_648379"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            134..>2983
                     /gene="pgmB"
                     /locus_tag="VFM52_09860"
     CDS             134..>2983
                     /gene="pgmB"
                     /locus_tag="VFM52_09860"
                     /EC_number="5.4.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015446882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008801 - beta-phosphoglucomutase activity
                     [Evidence IEA];
                     GO_process: GO:0046352 - disaccharide catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-phosphoglucomutase"
                     /protein_id="HET8765513.1"
                     /translation="MSAPDPWALRRSDRDLADRASSESLFALANGTLGVRGGCEEGAS
                     ASQGCFLAGVWERSAIHYHERFTGFAAHTDTRLPVADACRIRVWLGAEQVNPDAAPFH
                     PVERELDLRNGCLRRTLRWRAAAGGSVEIVAERVVPLDTPALLAIRYRVRSIDYRGPI
                     RLESAIDTTRGAAAQGDDPRIGATVDGGLQTHAGAATAELAWVAQHTCGSAIRLVCAQ
                     AHRLPGAAGLTHGAASYAPAGAIQTFHGELQPGASVVLEKFATWTWSDPGADAETDPV
                     LLAGAKAALATAGQAGFPSLLAGQAERLQTLWATADLAIDGAPDVAQALRFNLFQLFQ
                     SGPRSDACSMAAKGLTGEGYEGHCFWDTEAFALPALVQVAPDVARHLLVWRYRTLDRA
                     RAHARELDHPHGALYAWRTISGDECSAYFPGGSAQYHINAAIAWAVRLYVDITGDDGF
                     LRTMGAEMLFETARIWMAIGHHDARRGGAFCLCEVTGPDEYSALVDNNHYTNRMAQRH
                     LRDAVATAQWLAQRFPADYSQLSTRIGLQADELAAWQRAADAMYLPVDAALGVFPQDD
                     GFLDKPRLDAADMRDPALRPLLLHRHPLTIYRHQVCKQADVVLALMLAGEAVHPAAKR
                     RNFDYYEPLTLHDSTLSASTFSVVASEVGYAEKAYRYFLDTLRVDLDDLHGNAAHGLH
                     MAAMAGSWLALTWGFGGLRVSGAGLALAPRLPQAWHGYRFAVGWHDARLRVEVGADAV
                     RYTLLHGNELAFTHHGQPQHLRAGESLTLPNPAPPRAVEAVIFDLDGVLADTARLHRA
                     AWRELAEEIGAPFDDDLAERMKGVDRMGSLELLLARAPRRYDATEKAALAARKNARYV
                     ALISQLGPHDLLPGARAALLATRRAGLKTALASASRNAPLLIERLGITGLFDHVVDAG
                     HIAHSKPHPEIFLAAAAGLGVAPAACLGVEDAAAGI"
BASE COUNT          426 a         1092 c         1041 g          424 t
ORIGIN      
        1 aatgaaatgt tatcgatatc ttgatatcga taacattggc tcgtatgctc ggctcgtggg
       61 cgccacaggg cgccggaatt cccaaggggc aatcggcgtg atggctgggg acgacacccg
      121 ttgcgaagct gccgtgtcgg ccccggatcc gtgggccctg cgccgcagcg accgcgacct
      181 ggccgatcgc gcctccagcg aaagcctgtt cgcgctggcc aacggcacgc tgggcgtgcg
      241 cggcggctgc gaggaaggcg ccagcgccag ccagggctgt ttcctcgccg gcgtctggga
      301 acgctcggcc atccactacc acgagcgttt caccggcttc gcggcccaca ccgacacccg
      361 cctgccggtc gccgatgcgt gccggatccg ggtgtggctg ggcgccgagc aggtgaaccc
      421 cgacgcggcg ccgttccatc cggtcgaacg cgaactcgac ctgcgcaacg gctgcctgcg
      481 gcgcacgctg cgctggcggg cggcggccgg cggcagcgtc gagatcgttg ccgaacgcgt
      541 agtgccgctg gacacgccgg cgctgctggc catccgctat cgcgtgcggt cgatcgatta
      601 ccgcggcccg atccggctcg agtcggcgat cgacaccacg cgcggcgctg ccgcgcaagg
      661 cgacgacccg cgcatcggcg ccacggtgga cggcggcctg cagacgcacg ccggcgccgc
      721 caccgccgag ctggcgtggg ttgcacagca cacctgcggc agcgcgatcc ggctggtgtg
      781 cgcgcaggcg caccggctgc cgggcgcggc cggcctcacc cacggcgcgg ccagctacgc
      841 gccggccggc gccatccaga ctttccacgg cgaactgcag ccgggcgcct ccgtggtgct
      901 cgaaaagttc gcgacctgga cgtggtccga cccaggtgct gacgcggaga cggaccctgt
      961 tctgctggcc ggcgccaagg cggcgctggc cacggccggc caagcgggct tcccctccct
     1021 gcttgccggc caggcggaac ggttgcagac actgtgggcc accgccgatc tcgccatcga
     1081 cggtgcgccc gacgtcgcgc aggcactgcg cttcaacctg ttccagttgt tccagtccgg
     1141 cccgcgcagc gacgcctgca gcatggcggc caagggcctg accggcgaag gctacgaagg
     1201 ccattgcttc tgggacaccg aggccttcgc gctgcccgcg ctggtgcagg tggcgccgga
     1261 cgtcgcgcgg cacctgctgg tgtggcgcta ccgcacgctg gaccgcgccc gcgcccatgc
     1321 gcgcgagctg gatcacccgc acggcgcgct gtacgcgtgg cgcacgatca gcggcgacga
     1381 atgctcggcg tatttccccg gcggctcggc gcagtaccac atcaacgccg cgatcgcgtg
     1441 ggcggtccgg ctgtacgtcg acatcaccgg cgatgatgga ttcctgcgca cgatgggcgc
     1501 ggaaatgctg ttcgagaccg cgcgcatctg gatggccatc ggccaccacg acgcgcgccg
     1561 cggcggcgcg ttctgcctgt gcgaggtgac cgggccggac gagtactcgg cgctggtgga
     1621 caacaaccac tacaccaacc gcatggcgca gcggcatctg cgcgacgcag tggccaccgc
     1681 gcagtggctg gcacagcgat ttccggctga ttactcgcaa ctctccacgc gcatcggctt
     1741 gcaggcggac gagctcgccg cgtggcaacg cgcggcggac gcgatgtacc tgccggtcga
     1801 tgccgcgctt ggcgtgttcc cgcaggacga cggctttctc gacaagccgc gcctggacgc
     1861 cgccgacatg cgcgaccccg cgctgcggcc gctgctgctg catcgccacc cgctgacgat
     1921 ctatcgccac caggtgtgca agcaggccga cgtggtgctg gcgctgatgc tcgccggcga
     1981 ggcggtgcac ccggccgcca agcggcgcaa tttcgattac tacgagccgc tcaccctgca
     2041 cgactccacg ctgtcggcct cgacgttctc cgtcgtggcc agcgaggtcg gctacgccga
     2101 gaaggcgtac cggtatttcc tcgacaccct gcgcgtcgac ctcgacgacc tgcacggcaa
     2161 cgccgcccac ggcctgcaca tggcggcgat ggccggcagc tggctcgcgt tgacctgggg
     2221 tttcggcggg ctgcgcgtga gtggggccgg cctggcgctg gcgccgcgcc tgccgcaggc
     2281 atggcacggc taccgcttcg ccgtaggctg gcacgatgcg cggctgcgcg tggaggtcgg
     2341 cgccgacgcg gtgcgctaca cactgctgca cggcaacgag ctggcgttca cccatcacgg
     2401 ccagccccag cacctgcgtg ccggggaatc gctgacgctg cccaaccccg cgccgccgcg
     2461 cgccgtggaa gcggtcatct tcgacctcga cggcgtgctc gccgataccg ccaggctgca
     2521 tcgcgcggcg tggcgggaac tcgcggagga gatcggcgcg ccgttcgacg acgacctcgc
     2581 cgaacgcatg aagggcgtgg accgcatggg ctcgctggag ctcctgctcg cacgcgcgcc
     2641 acgccgatac gatgcgacgg aaaaagccgc gctggccgcg cgcaagaacg cccgctacgt
     2701 ggcgctgatc agccagctcg gcccgcacga cctgctgccg ggcgcacgcg cggcgctgct
     2761 ggcaacccgc cgtgcggggc tgaagaccgc actggcctcg gccagccgca acgccccgct
     2821 gctgatcgag cggctgggca tcaccgggct gttcgaccac gtggtcgatg ccggccacat
     2881 cgcgcattcc aagccacacc cggaaatctt tctcgccgcc gcggccggtc tcggcgtggc
     2941 gccagcggcc tgcctcggcg tggaagacgc cgcggcgggc att
//
LOCUS       DASSVL010000564         2106 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1058407,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000564 DASSVL010000000
VERSION     DASSVL010000564.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2106)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2106)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2106
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1058407"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..624)
                     /locus_tag="VFM52_09865"
     CDS             complement(<1..624)
                     /locus_tag="VFM52_09865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017460214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--D-alanine ligase"
                     /protein_id="HET8765514.1"
                     /translation="MAAHPIPPSRISDPGAFGRVAVVMGGSSSEREVSLNSGHGVLDA
                     LRSRGVDAHAIDGIPALLDAVRAGHFARVFNILHGQHGGGEDGVLQGALDSLHIPYTG
                     SGVLGSALSMDKIRSKQVWSALGLPTPKFLPLPRGADVHDAARGIGFPLIVKPASEGS
                     SVGVSRVFKESDLDDAVALAQRYPGDLLMETLVEGDELTVSILQDDVL"
     gene            complement(624..2063)
                     /gene="murC"
                     /locus_tag="VFM52_09870"
     CDS             complement(624..2063)
                     /gene="murC"
                     /locus_tag="VFM52_09870"
                     /EC_number="6.3.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014401868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008763 - UDP-N-acetylmuramate-L-alanine
                     ligase activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate--L-alanine ligase"
                     /protein_id="HET8765515.1"
                     /translation="MTPHRLPPHGDIMQSFRRVHFIGIGGAGMSGIAEVLHTLGYDVS
                     GSDRAASPVTERLAGMGVHVAIGHAAEHVANVDAVVVSSAIKLDNPELVAAQARRIPV
                     VPRAEMLGELMRFRRGIAVAGSHGKTTTTSLTASVLAEAGYDPTFVIGGQLLSAGANA
                     RLGAGTYLVAEADESDGSFLKLSPVIAVVTNIDADHLDHYHGDFAELKQAFADFLHRL
                     PFYGLAVLCVDDPEVAELAQRTARSTLTYGIERAADVRGANLRAEGARTHFELMLPGQ
                     PSLPITLNLPGRHNVLDALAAATIGWHLGVEPYAIARALERFQGVGRRFHINGELPID
                     AGKVMLVDDYGHHPRELAAVMQAARDGWPDRRLVIVFQPHRYTRTRDLLDDFAGVLCE
                     ADALVLTDVYPAGEAPIAGADGRALARAVRARGKVDPVFIEHPRALRETLPALLGDGD
                     LVLMLGAGDIGAAAAELARGGNLKTEGDV"
BASE COUNT          349 a          748 c          702 g          307 t
ORIGIN      
        1 cagcacgtcg tcctgcagga tcgagacggt gagttcgtcg ccttcgacca gggtttccat
       61 cagcagatcg ccgggatagc gctgcgcaag cgccaccgcg tcgtccagat cgctttcctt
      121 gaacacgcgc gacaccccga cgctggaccc ttccgacgcc ggcttcacga tcagcgggaa
      181 cccgatcccg cgcgccgcat cgtgcacatc ggcaccgcgt ggcagcggca ggaacttcgg
      241 cgtcggcagg cccagcgcac tccagacttg cttgctgcgg atcttgtcca tcgacaatgc
      301 cgaaccgagc acgccggaac ccgtgtaagg aatgtgcagc gaatccagcg cgccctgcag
      361 cacgccgtcc tcgccaccgc cgtgctggcc gtgcaggatg ttgaacaccc gcgcgaaatg
      421 gccggcgcgc accgcgtcca gcagggccgg aatgccatcg atcgcgtgcg cgtccacgcc
      481 gcgtgacctc aacgcgtcca gcacaccgtg cccggaattc aacgacacct cgcgctcgga
      541 cgaactgccg cccatcacga cggcgactcg gccgaacgcg ccgggatcgg agattcggga
      601 ggggggaatc ggatgcgcgg ccatcacacg tcaccttcgg ttttcagatt gccgccgcgc
      661 gcgagttcgg ccgccgccgc gccgatgtca cccgcgccca gcatcagcac caggtcgcca
      721 tcgcccagca atgcaggcag cgtttcgcgc agggcgcgcg gatgttcgat gaataccgga
      781 tcgaccttgc cgcgcgcgcg caccgcacgc gccagcgcgc ggccgtcggc gcccgcgata
      841 ggcgcctcgc ccgcaggata gacgtcggtc agcaccagcg cgtcggcttc gcacagcacg
      901 ccggcgaagt cgtccagcag atcgcgggtg cgggtataac ggtgcggctg gaacacgatc
      961 accagccgcc gatcgggcca gccatcgcgc gccgcctgca tcaccgcggc gagctcgcgt
     1021 ggatgatggc cgtagtcgtc gaccagcatg accttgcccg cgtcgatggg caattccccg
     1081 ttgatgtgga agcgccggcc cacgccctgg aaccgctcca gcgcgcgcgc gatcgcgtac
     1141 ggctcgacgc cgaggtgcca accgatggtg gcggcggcca gcgcgtcgag cacgttgtgg
     1201 cgcccgggca ggttcagggt gatgggcaga ctcggctggc ccggcagcat cagttcgaaa
     1261 tgcgtgcgcg cgccctctgc gcgcaggttg gcgccgcgca cgtcggccgc gcgctcgatg
     1321 ccgtaggtca gcgtcgaacg cgccgtgcgc tgggcaagtt ccgcgacttc cggatcgtcg
     1381 acgcacaaca ccgccaatcc gtagaacggc aggcggtgca ggaaatccgc gaacgcctgc
     1441 ttcagttccg cgaaatcgcc gtggtaatga tcgaggtggt ccgcgtcgat attggtgacc
     1501 accgcgatca ccggcgacaa tttcaggaac gacccgtcgg attcgtcggc ttcggcgacg
     1561 agataggtgc cggcgcccag ccgcgcattc gcgccggccg acagcagttg tccgccgatc
     1621 acgaaggtcg gatcgtagcc ggcctcggcc agcacgctgg cggtgaggct ggtggtggtg
     1681 gtcttgccgt gcgaaccggc caccgcgatg ccgcgccgga agcgcatcag ttcgcccagc
     1741 atctcggcgc gcggcaccac cgggatgcgg cgcgcctgcg cggccacgag ttccgggttg
     1801 tccaacttga tcgcactcga cacgacgacc gcatccacgt tggcgacgtg ttcggcggca
     1861 tggccaatgg cgacatgcac gcccatgccg gccagccgct cggtgacggg cgaggccgcg
     1921 cggtcggaac ccgacacgtc gtaacccagc gtgtgcagca cctccgcgat gccgctcatg
     1981 ccggcgccgc cgatgccgat gaaatgcacg cgccggaaac tctgcatgat gtcgccgtgc
     2041 ggcgggaggc gatgcggcgt catgcggcca cctccatgca acgctgcgcg atcacgtcgg
     2101 cggcgt
//
LOCUS       DASSVL010000565         3859 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_479085, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000565 DASSVL010000000
VERSION     DASSVL010000565.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3859)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3859)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3859
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_479085"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..128
                     /locus_tag="VFM52_09875"
     CDS             <1..128
                     /locus_tag="VFM52_09875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004521 - RNA endonuclease activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ribonuclease domain-containing protein"
                     /protein_id="HET8765516.1"
                     /translation="TVPTPGARNRGARRIITGGTPPAAYWYTGDHYRSFEPITPP"
     gene            125..484
                     /locus_tag="VFM52_09880"
                     /pseudo
     CDS             125..484
                     /locus_tag="VFM52_09880"
                     /inference="COORDINATES: protein motif:HMM:NF013500.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="barstar family protein"
     gene            548..769
                     /locus_tag="VFM52_09885"
     CDS             548..769
                     /locus_tag="VFM52_09885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003468049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding S4 domain-containing protein"
                     /protein_id="HET8765517.1"
                     /translation="MPAQTLSFALDREFVKLDNLLKLTGVSDSGGAAKHLIANGDVQV
                     DGVVELRKTCKIRAGQTVRVGGVEIRVGG"
     gene            complement(773..1591)
                     /locus_tag="VFM52_09890"
     CDS             complement(773..1591)
                     /locus_tag="VFM52_09890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007082253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arylamine N-acetyltransferase"
                     /protein_id="HET8765518.1"
                     /translation="MTEDMDLAAYLRRIGYHATPHADFTTLAALATAHANAIAFENID
                     PFCGHPVQLDLGAIQAKLVGAGRGGYCFEHNHLFAAALRALGFRVEGLIARVLWGQPE
                     DAITAETHMLLRVAAGGDAWLADVGFGSMTLLGALRLEPGVTQSTALEAFRLVRDGGE
                     WRMQADIRGTWRTLYRFAPEPHPEVDYVVANHYVSTWPGSKFVQHLIAARVAGDRRLT
                     LRDRVFSVHRAGMEPERHVLRDGAEVCAVLGDAFCIRVPDAAALARRIDALPAE"
     gene            complement(1702..>3859)
                     /locus_tag="VFM52_09895"
     CDS             complement(1702..>3859)
                     /locus_tag="VFM52_09895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007082249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HET8765519.1"
                     /translation="VVNGAVLLARVLFVAVLLGLVGVGLLWVGVARRMLDRIRGSEVR
                     YRLLFESAAVAIVMVDEAGGGILEANQLMAAWTGYDPAELPGMRFDTLLQPGSSHRVG
                     PSLLATLAARDGRLRPVEMQVSHTAWGVRSVRQIIMRDVSERIALERERQVAAEALAG
                     IAEGVVIADAERRVVSVNAAHAELTGFAPADVQGRRLDELHCLPGGAPLPAVAWPGVT
                     GARHWSGEVTGRRADGSEFPEQLSISVIRGAQGEVLHYVAVFSDVQAEQSQRRRLEHL
                     AAHDPLTGLFNRAEFERRCEEAVTAAARTRGAMAVLFVDLDAFKMVNDSYSHAIGDRL
                     LQKVAERIGRELGAGDAAGRIGGDEFTVLLADLALREDAGEVAQRLLARLAEPVTVDD
                     CELMLSASIGIAGYPLDGGDAPTLIANADAAMYVAKNAERNTFRYYTPVMQAHARQRL
                     LLVSELRRALAEGEFRLMFQPGVDMQSGQIVAVEALLRWQHPERGELEPAGFIPAAES
                     LGLIRHIDEWVLDAACRQVRAWRDAGVPAVRVAVNLSARAFGHPGFIAHLEHALRQYA
                     IPAGWLALEITEGTMLRLGDETERTMEALHALGVEVAIDDFGTGYSSMAYLKLPSVTT
                     LKIDRSFVTGLPHEDNDVAIARAILAMARSLGRRTIAEGIETEDQHEFLRRAGCDEGQ
                     GYLYSRPQPAAAIERLLVPQARRGTPHLRLVPPRRA"
BASE COUNT          578 a         1437 c         1306 g          538 t
ORIGIN      
        1 acacggtgcc gacgccgggc gcgcgcaacc gtggcgcgcg gcgcatcatc accggcggca
       61 cgccgccggc tgcgtactgg tacaccggcg accactaccg cagcttcgaa ccgatcacgc
      121 cgccatgaat gcgccgccgc acgaccccga tctcacccgc cccgcgcagg acggcgtgta
      181 tcgcgtcgtc gatgccgacc tcgaccggct ggcggcactg gcccgcgccg gcgggctcgc
      241 cgcctaccgc atcgacctcg ccggctgcgc cgacgcggaa gccctcttcg accgcatggc
      301 ggatgcgctg gcgctgccga cccacttcgg ccgcaactgg gacgcgctgg ccgattgcct
      361 gcgcgacccc gcgtggtgcc cggccgacgg ctacgtgctg ctgttcgcgc acgccgccga
      421 cttgcgcgcc cgcagccgtt ccagcttcga caccctgctc ggcgtgctgg acgacgccac
      481 cacgtttgcg gccgatgccg agcgcccctg ctttgccttc atcgcccggc cggaaaccgt
      541 tgccaccatg cccgcgcaaa ccctgtcctt cgcgctcgac cgcgagttcg tcaagctcga
      601 caacctgctg aagctgaccg gcgtcagcga cagcggcggc gcggccaagc acctgattgc
      661 caacggcgac gtgcaggtgg atggcgtggt ggaactgcgc aagacctgca agatccgcgc
      721 ggggcagacg gtgcgcgtgg gcggcgtcga gatccgcgtc ggcggctgaa gctcactccg
      781 ccggcaaggc gtcgatgcgg cgcgccagcg ccgcggcatc cggcacgcga atgcagaacg
      841 catcgcccag cacggcgcac acctcggcac cgtcgcgcag cacgtggcgc tccggctcca
      901 tgcctgccct gtgcacgctg aacacgcggt cgcgcagggt cagccggcgg tcgccagcca
      961 cccgcgccgc gatcagatgc tgcacgaatt tcgatccggg ccaggtcgac acgtaatggt
     1021 tggccaccac gtaatcgact tccggatgcg gttcgggcgc aaagcggtac agcgtgcgcc
     1081 aggtgccgcg gatgtcggcc tgcatgcgcc actcgccgcc atcgcgcacc agccggaatg
     1141 cctcgagcgc ggtggactgc gtcacgcccg gctccagccg caatgcgccg agcagggtca
     1201 tgctgccgaa gccgacgtcg gccagccacg cgtcgccgcc cgcggcaacg cgcagcagca
     1261 tgtgggtctc cgccgtgatc gcgtcttccg gctgtcccca cagcacgcgc gcgatgaggc
     1321 cttccacgcg aaagccgagc gcgcgcaagg ccgccgcgaa cagatggttg tgctcgaagc
     1381 agtagccgcc gcgtccggca ccgacgagct tggcctggat cgccccgagg tcgagctgca
     1441 ccggatggcc gcaaaacggg tcgatgttct cgaacgcgat ggcattggcg tgcgcggtag
     1501 ccagcgccgc cagcgtggtg aaatcggcat gcggcgtggc gtggtaaccg atgcgccgca
     1561 ggtacgcagc gagatccatg tcctcagtca tccgcgcact ctaggcgccc gcacggcgga
     1621 aagcatgcgg ccgatgcaac ctgtcgcgcg atgcggctcc cggtcgagga tggccgcggt
     1681 ctggtccggc gcggcgtgcg gtcacgcccg ccggggcggc accagccgca ggtgcggcgt
     1741 gccgcggcgc gcctgcggca ccagcaggcg ctcgatcgcg gccgccggct gcgggcgcga
     1801 atacaggtag ccctggccct cgtcgcagcc ggcgcggcgc aggaactcat gctgatcctc
     1861 ggtctcgatg ccttcggcga ttgtgcgccg gccgaggctg cgggccatgg ccaggatcgc
     1921 ccgcgcgatc gcgacgtcgt tgtcttcgtg cggcaggccg gtgacgaacg agcggtcgat
     1981 cttgagcgtg gtcaccgacg gcagcttgag atacgccatc gacgagtaac cggtgccgaa
     2041 gtcgtcgatg gccacctcca cgcccaatgc gtgcagcgcc tccatcgtgc gttcggtctc
     2101 gtcgccgagg cgcagcatgg tgccctcggt gatctccagc gccagccagc cagccggtat
     2161 tgcgtattgc cgcaaggcgt gttccagatg cgcgatgaaa ccggggtggc cgaacgcccg
     2221 cgcggaaaga ttgacggcaa cgcgcaccgc cggcacgccg gcgtcccgcc aggcgcggac
     2281 ctgacggcag gccgcgtcca gcacccattc gtcgatatgg cggatgagcc ccaggctttc
     2341 cgccgccgga atgaacccgg ccggctccag ttcgccgcgc tcgggatgct gccagcgcag
     2401 cagcgcctcg accgcgacga tctggccgct ctgcatgtcc acgccgggct ggaacatcag
     2461 gcggaattcg ccttcggcca gtgcccggcg cagttcggac accagcagca ggcgctggcg
     2521 tgcgtgcgcc tgcatcaccg gcgtgtagta gcggaacgtg ttgcgctcgg cattcttcgc
     2581 cacgtacatc gcggcgtcgg cgttcgcgat cagcgtcggc gcgtcgccgc cgtccagcgg
     2641 gtagccggca atgccgatgc tggcgctgag catcaactcg cagtcgtcca ccgtcaccgg
     2701 ttcggcaagc cgggccagca ggcgctgggc cacctccccg gcgtcctcgc gcagcgcaag
     2761 gtcggccagc agcacggtga actcgtcgcc accgatgcgg ccggcagcgt cgccggcgcc
     2821 cagttcgcgc ccgatgcgct cggccacctt ctgcagcagg cgatcgccga tcgcgtggct
     2881 gtagctgtcg ttgaccatct tgaaggcatc gagatcgacg aacagcaccg ccatcgcgcc
     2941 gcgggtgcgc gcggcggcag tcaccgcttc ttcgcagcgg cgctcgaact cggcgcggtt
     3001 gaacaggccg gtcagcggat cgtgggcggc gaggtgttcg agccgccggc gctgcgactg
     3061 ctccgcctgc acgtcgctga acaccgccac gtagtgcagc acttcgccct gggcgccgcg
     3121 aatcacgctg atgctgagct gctcgggaaa ctcgctgccg tcggcacgcc gccccgtgac
     3181 ctcgccgctc cagtgccgcg cgccggtcac gcccggccag gccacggccg gcaacggtgc
     3241 gccgccaggc aggcaatgca attcgtcgag ccgccgcccc tgcacgtcgg ccggcgcgaa
     3301 gccggtaagt tcggcgtgcg cggcgttcac cgacaccacg cggcgctcgg cgtcggcaat
     3361 gacgacgcct tcggcgatgc cggccagcgc ctccgccgcc acctgccgtt cgcgttcgag
     3421 cgcgatgcgc tcggacacgt cgcgcatgat gatctggcgc acgctgcgca cgccccatgc
     3481 cgtatggctg acctgcatct cgaccgggcg caggcggccg tcccgggcgg ccagggtcgc
     3541 gagcaacgat ggcccgacgc ggtggctcga ccccggctgc agcagggtat cgaagcgcat
     3601 gcccggcagc tcggccgggt cgtagcccgt ccacgccgcc atcaactggt tggcttcgag
     3661 gatgccgcca ccggcttcgt cgaccatcac gatggcgacc gccgcgcttt cgaacaacag
     3721 gcgataacgc acctcgctgc cgcgaatgcg gtccagcatg cgccgtgcga cgccgaccca
     3781 gagcagcccg acgccgacca gcccgagcag cacggccacg aacagcacac gcgccagcag
     3841 caccgccccg ttcaccacc
//
LOCUS       DASSVL010000566         3161 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_493281, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000566 DASSVL010000000
VERSION     DASSVL010000566.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3161)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3161)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3161
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_493281"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..714)
                     /locus_tag="VFM52_09900"
     CDS             complement(<1..714)
                     /locus_tag="VFM52_09900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008436952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0030420 - establishment of competence for
                     transformation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-processing protein DprA"
                     /protein_id="HET8765520.1"
                     /translation="MDDTDELRAWLTALRTPGLGPGGLREALAANGDDIHRALGDLRR
                     HAATLGAGAGAWLEAPDAALLAADLAWLAQPGRRLLCCTEADFPPLLEAIPQPPAALF
                     VAGDAGLLLHPQVAIVGARNASPAGLGHARRFARALAQAGFVVTSGMADGIDGAAHAA
                     ALDADLPTIAVIGTGADRVYPRKHLELARRIATQGALVSEFPLGTPARADHFPRRNRL
                     LAGLALGTLVIEAGLKSGSL"
     gene            complement(786..1913)
                     /locus_tag="VFM52_09905"
     CDS             complement(786..1913)
                     /locus_tag="VFM52_09905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008436953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0097367 - carbohydrate derivative binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysM domain-containing protein"
                     /protein_id="HET8765521.1"
                     /translation="MFKKALAVLAGSLVAVTVFAAGAAQLRNSHPDSYTVRRGDTLWG
                     ISAKFLMKPWLWPEIWQANPQVRNPHLIYPGDVLNLSFINGRPGLTLTPSVHREGEAV
                     TAIPLDALKTFLKDLRVMDSGAVSKAPYVVGVEEDQLRVTSGQNIYVRGLDAEPGQRW
                     AIVRPEHLFRGYDDGNRGTAIYGDEIWANAAMVKSPWEEDFRNDSGQYRRGKDLGAEV
                     KVIGTAQVLHSGDPATLLVTDSTAEIRSGDRIMPVDDNPYDPYFYPHAATSDPKDGRV
                     IAFTDAMDAVGPHQIVALSVGAKDGVDNGMTFSIWQPGENIHDDVASNSWNRSIGKRV
                     TLPDEYIGHVMVFRTFDRVSYGLVMDGLRPVKKGDKIKVPI"
     gene            2036..2545
                     /gene="def"
                     /locus_tag="VFM52_09910"
     CDS             2036..2545
                     /gene="def"
                     /locus_tag="VFM52_09910"
                     /EC_number="3.5.1.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008436954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042586 - peptide deformylase activity
                     [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide deformylase"
                     /protein_id="HET8765522.1"
                     /translation="MSTLNIIEFPDPRLRMKAAPVTVFDAKLKQFVADMLETMYAANG
                     VGLAATQVAVQQRVLVIDMSDERNQPLVLINAEILEKGGTQVYQEGCLSFPGIYADVT
                     RALDVKVKAHDVDGKEFIYAAEGPLAVAVQHEMDHLDGKVFVDYLSPLKRSLLLKRLE
                     KHRKQAASA"
     gene            2557..>3161
                     /gene="fmt"
                     /locus_tag="VFM52_09915"
     CDS             2557..>3161
                     /gene="fmt"
                     /locus_tag="VFM52_09915"
                     /EC_number="2.1.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008214012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004479 - methionyl-tRNA formyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006431 - methionyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionyl-tRNA formyltransferase"
                     /protein_id="HET8765523.1"
                     /translation="MRVVFAGTPDFSVPCLAACRASGAEVVAVYTQPDRPAGRGRKLT
                     PSPVKQAALDAGIAVEQPESLRGAEAQAKLAAYAPDLMVVVAYGLILPRAVLATPRLG
                     CWNVHASLLPRWRGAAPIQRAILAGDTETGVGLMQMEAGLDTGPVLIERRTPIARDDT
                     GGSLHDRLAALGAEALAEGLARVLAGETIAATPQAAEGAVYA"
BASE COUNT          470 a         1091 c         1124 g          476 t
ORIGIN      
        1 cagcgagccg gatttcagcc cggcctcgat caccagcgtg ccgagcgcaa gcccggcgag
       61 cagccggttg cggcgcggga aatgatcggc gcgcgccggc gtgccgagcg gaaactcgct
      121 gaccagcgcg ccttgggtgg cgatgcgccg cgccagttcc aggtgcttgc gcgggtagac
      181 ccggtcggcg ccggtgccga tcacggcgat ggtcggcagg tcggcgtcga gcgcggcggc
      241 atgtgccgcg ccatcgatgc cgtcggccat gccgctggtg acgacgaacc cggcctgcgc
      301 cagtgcgcgg gcaaaccggc gcgcgtggcc gagcccggcc ggactcgcat tgcgggcgcc
      361 gacgatggcc acctgcgggt gcagcagcag gccggcgtca ccggcgacga acagggccgc
      421 cggcggctgc gggatggctt ccagcaaggg cgggaaatcc gcctcggtgc agcacagcag
      481 gcgacgaccg ggctgcgcga gccaggcgag gtcggcggcc agcagcgcgg cgtccggcgc
      541 ctccagccac gcgccggcgc ccgccccgag cgtcgccgca tgccggcgca ggtcgccgag
      601 cgcgcggtgg atatcgtcgc cattggctgc cagcgcctcg cgcaggccgc ccggcccgag
      661 gcccggggtg cgcagcgcgg tcagccacgc gcgcagttcg tcggtgtcgt ccatgcgccg
      721 agtgtacgaa cgaagacggc gcggggtgag ccgcgccgtc gtgtgggcat cgccttacgc
      781 gtggatcaga tcggcacctt gatcttgtcg cccttcttca ccgggcgcag gccgtccatc
      841 accaggccgt agctgacgcg gtcgaaggtg cggaacacca tcacgtggcc gatgtattcg
      901 tccggcagcg tcacgcgctt gccgatgctg cggttccagc tgttgctggc gacgtcgtcg
      961 tggatgttct ccccgggctg ccagatcgag aacgtcatgc cgttgtcgac gccgtccttc
     1021 gcgccgaccg acagcgccac gatctggtgc ggaccgacgg cgtccatcgc atcggtgaac
     1081 gcgatcaccc ggccgtcctt cgggtcggag gtggcggcgt gcgggtagaa atacggatcg
     1141 tacgggttgt cgtcgaccgg catgatgcgg tcgccgctgc ggatctcggc ggtggagtcg
     1201 gtcaccagca gggtcgccgg gtcgccgctg tgcagcacct gcgccgtgcc gatcaccttc
     1261 acctcggcgc cgagatcctt gccgcggcgg tattggcccg agtcgttgcg gaagtcttcc
     1321 tcccagggcg acttcaccat cgccgcgttg gcccagatct cgtcgccgta gatggcggtg
     1381 ccccgattgc cgtcgtcgta gccgcggaac aggtgctcgg ggcgcacgat ggcccagcgc
     1441 tggcccggtt cggcgtcgag cccgcgcacg tagatgttct ggccggaggt gacgcgcagc
     1501 tggtcctcct cgacgccgac gacgtacggc gccttgctga ccgcgcccga atccatcacg
     1561 cgcaggtcct tgaggaaggt cttgagcgcg tcgagcggaa tcgccgtcac cgcctcgccc
     1621 tcgcggtgca cgctgggcgt gagcgtcagc ccgggccgac cgttgatgaa cgacaggttg
     1681 agcacgtcgc ccggatagat caggtgcggg ttgcggacct gcgggttggc ctgccagatt
     1741 tccggccaca accacggctt catcaggaat ttcgccgaaa tgccccacag cgtgtcgccg
     1801 cggcgcacgg tgtaggagtc cggatggctg ttgcgcaact gcgccgcacc ggcggcgaac
     1861 acggtgaccg ccaccaggct gccggccagc accgccaagg ctttcttgaa catgggtggg
     1921 aacccctttt cccgcgactg cggcgagtgt agccgaagcg ttaaggcgcg caatcggcag
     1981 cggttcgcaa aaaccggcgc ggtcgcggcc ggggcggcgt actacaatgg acggcatgtc
     2041 gaccttgaat atcatcgagt ttcccgatcc gcgcctgcgc atgaaagccg cgccggtgac
     2101 cgtgttcgac gccaagctca agcaattcgt cgccgacatg ctggagacga tgtacgccgc
     2161 caatggcgtc ggcctcgcgg ctacccaggt cgcggtgcag cagcgcgtgc tggtgatcga
     2221 catgagcgac gagcgcaacc agccgctggt gctgatcaac gccgagatcc tggagaaggg
     2281 cggcacgcag gtgtaccagg aaggctgcct gtcgttcccc ggcatctatg ccgacgtcac
     2341 ccgcgcgctc gacgtcaagg tcaaggcgca cgatgtcgac ggcaaggaat tcatctacgc
     2401 cgccgaaggc ccgctcgcgg tggccgtgca gcacgagatg gatcacctcg atggcaaggt
     2461 gttcgtcgat tacctctcgc cgctgaagcg ctcgctgctc ttgaagcggc tggagaagca
     2521 ccgcaagcag gcggcgagcg cttgagcgtt cgcccgttgc gggtcgtctt cgccggcacg
     2581 cctgatttct cggttccctg cctcgccgcg tgccgcgcga gcggcgccga ggtggttgcc
     2641 gtctacaccc agcccgatcg tcccgccggc cgtggccgca agctcacgcc aagcccggtc
     2701 aagcaggccg ccctggacgc cggcatcgcg gtcgagcagc ccgagtcgct gagaggcgcc
     2761 gaggcacagg cgaagctcgc ggcctacgcg cccgacctga tggtggtcgt cgcctacggg
     2821 ctgatcctgc cgcgcgcggt gctcgcgacg ccgcggctgg gttgctggaa cgtgcacgcc
     2881 agcctgctgc cacgctggcg cggcgccgcg ccgatccagc gtgcgatcct cgccggcgac
     2941 accgaaaccg gcgtcggcct gatgcagatg gaagccgggc tcgataccgg cccggtgctg
     3001 atcgaaaggc gcacgccgat cgcccgtgac gacaccggcg gcagcctgca cgaccgcctc
     3061 gccgcgctcg gcgcggaggc gctggccgaa ggcctggcgc gcgtgctggc cggcgaaacc
     3121 atcgctgcga cgccacaagc cgccgaaggc gcggtgtacg c
//
LOCUS       DASSVL010000567         2104 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_874422, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000567 DASSVL010000000
VERSION     DASSVL010000567.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2104)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2104)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2104
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_874422"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..784)
                     /locus_tag="VFM52_09920"
     CDS             complement(<1..784)
                     /locus_tag="VFM52_09920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018972862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005615 - extracellular space [Evidence
                     IEA];
                     GO_function: GO:0047989 - hydroxybutyrate-dimer hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0019605 - butyrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxybutyrate oligomer hydrolase family
                     protein"
                     /protein_id="HET8765524.1"
                     /translation="MALELVGGVRRTEHRGDDDLLSAGLGLAGLAGLPARFADPARPT
                     PAELRRRSIQTDWKGIADLGPLGGFGRLYGQVPQVPGREYGAFARLPGARQPHRVLCQ
                     VPDTFDRKARCLVVGPSSGSRGVYGAIALAGGWGLPRGCAVAYTDKGAGTGYFDCADG
                     TGVALDGTRAKAGSATLEFEPANFRADTGIAVKHAHSGDHPEADWGRHVLQAVEFGLA
                     MLDEAFPGDAPFTPANTRIIVVGTSNGGGAALQAAGLDHDGWL"
     gene            complement(774..1442)
                     /locus_tag="VFM52_09925"
     CDS             complement(774..1442)
                     /locus_tag="VFM52_09925"
                     /inference="COORDINATES: protein motif:HMM:NF036525.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HET8765525.1"
                     /translation="MTVNRRLAATTVHLLPGAKQPGGSGRVLEAALKLFAERGYAGAS
                     VRDVAAAAGVKPATIYAHYPSKEHILAELCRVGHEEQYRVVRSAVLASTGEPCDQLVA
                     YVRAHVGFHTTYPMLAVVCNSELHVLGDELGSATFVLRRESEQLLREIIQRGLDAGAF
                     HAPDAWLAVAAIGGMGLRVAYWFTPEYGLTAAQVADGYAGFALRLLGAAPAVGTARGR
                     RHGA"
     gene            1633..>2104
                     /locus_tag="VFM52_09930"
     CDS             1633..>2104
                     /locus_tag="VFM52_09930"
                     /inference="COORDINATES: protein motif:HMM:NF019335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Plug domain-containing protein"
                     /protein_id="HET8765526.1"
                     /translation="MRSKQASLTLGLMATAIAFALAAPAPVLAVQTTPAPQDAVPGNA
                     QANPKTATNTATLPTIVVTATRRSESIQDVPGGVTALSGTFLDQIHANSFEQFAGFVP
                     GLSFDSLGPTSDIIAIRGVTTGGTQLSSGIGMYLDQVPIGASTPFGVGFQTFPVN"
BASE COUNT          370 a          774 c          665 g          295 t
ORIGIN      
        1 ccagccagcc gtcgtgatcg aggcccgcgg cctgcaacgc tgcaccgccg ccattggacg
       61 tgccgaccac gatgatgcgc gtgttggccg gcgtaaatgg cgcgtcaccc ggaaaagcct
      121 cgtcgagcat cgccaggccg aactcgactg cctgcaacac atgccggccc cagtcggctt
      181 cggggtgatc gcccgaatgt gcatgcttga ccgcgatgcc ggtgtcggcg cgaaagttgg
      241 ccggttcgaa ttcgagcgtg gcgctgccgg ccttggcgcg cgtgccgtcc agcgccacgc
      301 cggtgccgtc ggcgcagtcg aaataacccg taccggcgcc cttgtcggtg taggccacgg
      361 cgcagccgcg tggcaagccc cagccgcccg ccagggcgat cgcgccatag acgccgcgcg
      421 aaccggacga cggtccgacc acgaggcaac gtgccttgcg gtcgaatgta tccggtacct
      481 ggcacagcac gcggtgcggc tgccgcgcgc ccggcagtcg cgcaaacgcg ccgtattcgc
      541 ggccgggcac ttgcggaacc tggccgtaaa gacgtccaaa tccacccaac gggccaaggt
      601 cggcgatgcc cttccaatcg gtctggatcg agcgccgccg caactcggca ggtgtcggac
      661 gggcgggatc ggcaaagcgc gccggcagcc ccgcaaggcc cgcgaggcca agccccgcgc
      721 tcagcagatc gtcgtcaccg cggtgttcgg tccggcgcac cccgccaacc agttcaagcg
      781 ccatgtctcc tcccgcgcgc cgtacccacg gccggcgcgg cgcccagcag ccgcaacgcg
      841 aaacccgcgt agccatccgc cacctgggcg gcggtcaggc cgtattccgg cgtaaaccaa
      901 tacgccacgc gcaggcccat gccgccgatc gctgccacgg cgagccaggc gtcgggcgcg
      961 tggaatgcgc cggcgtcgag cccgcgctgg atgatttcgc gcagcagttg ttccgactcg
     1021 cgccgcagca cgaaggtcgc cgagcctagc tcgtcgccca gcacatgcaa ttcggagttg
     1081 cataccaccg cgagcatcgg ataggtcgtg tggaagccca catgggcgcg cacataggca
     1141 accagctggt cgcacggctc gcccgtactg gccagcacgg cgctgcgcac cacgcggtac
     1201 tgctcttcat gcccgacgcg gcacagctcg gcgaggatgt gctccttgga cggatagtgc
     1261 gcatagatcg tggccggctt gacgcccgcc gcggccgcca cgtcgcgcac cgacgcaccg
     1321 gcatagccgc gttcggcgaa cagcttgagc gccgcttcca gcacgcgccc cgaaccgccg
     1381 ggctgcttgg cgcctggcaa caaatgaacc gtggtagcgg cgaggcggcg gttgacggtc
     1441 atgacgggcc cagtatgaac atccgatcgg ttgcttgcca caagattgac agccatctaa
     1501 gccggcgcta caacgttaac cgaacgaacg ttagttaggc aagccaacca acccgcaagt
     1561 catcgggcca gccgtcacgg cagcccgcgg cgttgcaccc atcacacgac tgccgtatcc
     1621 ggaggggatc ccatgcgcag caagcaagcg tcgctcacac tcggcctcat ggccaccgcc
     1681 attgcatttg cactcgcggc gcctgccccg gtcctggcgg tgcagaccac gcccgcaccg
     1741 caggatgccg tgcccggcaa cgcgcaggcc aatccgaaaa ccgcaaccaa caccgccacg
     1801 ctgccgacga tcgtggtgac cgcgacccgc cgcagcgaat cgatccagga cgtgccgggc
     1861 ggcgtaacgg ccctgtcggg gacattcctc gaccagatcc acgccaacag cttcgagcag
     1921 ttcgcgggct tcgtgcctgg actgagcttc gattcgctcg gccccaccag cgacatcatc
     1981 gcgatccgcg gcgtcaccac cggcggcacg cagctttcca gcggcatcgg catgtacctg
     2041 gaccaggtgc cgattggcgc cagcacgccg ttcggcgtcg gcttccagac cttccccgtc
     2101 aaca
//
LOCUS       DASSVL010000568         3846 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_366530, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000568 DASSVL010000000
VERSION     DASSVL010000568.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3846)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3846)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3846
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_366530"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1133
                     /gene="hflX"
                     /locus_tag="VFM52_09935"
     CDS             <1..1133
                     /gene="hflX"
                     /locus_tag="VFM52_09935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019464042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="GTPase HflX"
                     /protein_id="HET8765527.1"
                     /translation="NLEKHVSARVVDRSGLILDIFAQRARSHEGQLEVELAQLKHLAT
                     RLVRGWTHLDAQRGGAIGNRGPGETQLETDRRLLGERVKQLTRRLDRVQVQRGQQRRA
                     RLRNTVPRVALVGYTNAGKSTLFNALTTGGVYAADQLFATLDPTVRRIDDLACGAVVV
                     ADTVGFIRELPHDLVAAFRGTLAEARDADLLLHVSDAADDEREALRRVVDQVLEEIGA
                     GDVPQLHVFNKIDLIGTRVPSGDGQEAATPSGAPQAGATAREPMPPRIDRDATGKPQA
                     VWLSAARGAGVELLRDALGELLGGTRVQATWSLPLTAGRLHAQLRAIGAISAESVDEQ
                     GWKLEIDAARRVLAPLGAGTAQDAVLVRGLLGAARADDDALC"
     gene            1272..2348
                     /gene="hflK"
                     /locus_tag="VFM52_09940"
     CDS             1272..2348
                     /gene="hflK"
                     /locus_tag="VFM52_09940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008436547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0045861 - negative regulation of
                     proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsH protease activity modulator HflK"
                     /protein_id="HET8765528.1"
                     /translation="MAWNEPGGGQRDPWNRQRPSGNKFSPDQLLKQFGKLFGGFGRGP
                     GNIATAIIVLVVVGLLMSSYTIIGARQVGVVLRFGEYTRTLPPGFHLKLPVPIETVDK
                     VEATRIRSLNDRMSMLTRDENILTIDFTVQYQVDDARKYLFSVSDPDASVGAAAEAAV
                     RSVIGGSDMDQVLSAAGANLVTDAQQALQHTLDIYHSGLRVTEVSFQNVAPPTEVKDA
                     FDDVNTAREDKQSTENNALAYANKVIPVARGDAARIAAEAAGYKAERIARAQGDAARF
                     DLLLAQYKAAPAVTRKRLWLETMEEVTAENAKVVDGSGGRNIINVPVGVATPGASDAA
                     TKAAAAAPAAAPTDGATAGKEKQP"
     gene            2345..3217
                     /gene="hflC"
                     /locus_tag="VFM52_09945"
     CDS             2345..3217
                     /gene="hflC"
                     /locus_tag="VFM52_09945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015447481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0045861 - negative regulation of
                     proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protease modulator HflC"
                     /protein_id="HET8765529.1"
                     /translation="MKRIVAIAIAVFVLLLGLNSMFVVNEGQSALLLQFGRIVRADYP
                     PGLHFKLPVIQQALHFDKRILSLDAQPERYFTSEKKSVNVDFYVKWRIADNAAYYRAT
                     GGDELQAEQRLSPIVKDALRFEFNARTLQELISGGRRDITERVRQQTDASARKNLGIA
                     VVDVRIKRIDLPDEVSESVYKRMRAERSQLANELRFTGQEAAEKIKADADRQGQVLRA
                     DADRDAAKVRGEGDAQAAEIYAQAYNQDPEFFAFYRSLAAYRKAFENGKSVLILKPDS
                     EFLHYFEKPDTGKH"
     gene            3338..>3846
                     /locus_tag="VFM52_09950"
     CDS             3338..>3846
                     /locus_tag="VFM52_09950"
                     /EC_number="6.3.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016903917.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004019 - adenylosuccinate synthase
                     activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006164 - purine nucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate synthetase"
                     /protein_id="HET8765530.1"
                     /translation="MGKSVVILGAQWGDEGKGKIVDLLTGRVGAVARFQGGHNAGHTL
                     VIKGKKTVLHLIPSGILRDDALCLIGNGVVLSPEALIQEIAALEANGVEVRSRVKISP
                     ATPLIMPYHIALDKAREAAAGKGAIGTTGRGIGPAYEDKVARRSIRVADLMYPHELPK
                     KLKAVVAYH"
BASE COUNT          668 a         1296 c         1345 g          537 t
ORIGIN      
        1 gcaacctcga aaagcacgtg agcgcgcgcg tggtcgaccg ttccggcctg atcctcgaca
       61 tcttcgccca gcgtgcgcgc tcgcacgaag gccagctcga agtcgaactg gcgcagctca
      121 agcacctcgc cacgcgcctg gtgcgcggct ggacccacct ggatgcgcag cgtggcggtg
      181 cgatcggcaa ccgcggcccg ggcgaaaccc agctcgaaac cgaccgccgc ctgcttggcg
      241 agcgcgtcaa gcagctcacc aggcggctgg accgggtgca ggtccagcgc ggccagcagc
      301 gccgcgcgcg gctgcgcaac acggtgccgc gggtggcgct ggtcggctac accaatgccg
      361 gcaaatccac cttgttcaac gcgctgacga ccggcggcgt gtacgcggcc gaccagctct
      421 tcgccacgct cgatccgacg gtgcgccgca tcgatgacct cgcctgcggc gcggtggtgg
      481 tggccgacac cgtgggcttc atccgcgagc tgccgcacga cctggtcgcc gcgttccgcg
      541 gcacgctggc cgaggcgcgc gatgccgacc tgctgctgca cgtcagcgac gccgccgacg
      601 acgagcgcga ggcgctgcgc cgcgtggtcg accaggtgct ggaggaaatc ggcgccggcg
      661 acgtgccgca actgcacgtg ttcaacaaga tcgacctgat cgggacccgc gtcccgtctg
      721 gcgacggcca agaagcggcc acccccagcg gcgcgccgca ggcaggcgcc acggcccggg
      781 agccgatgcc gccgcgcatc gaccgcgatg ccaccggcaa gccgcaggcg gtgtggttgt
      841 cggcggcccg gggggccggc gtcgaactcc tgcgcgacgc gttgggcgag ctgcttggcg
      901 gcacgcgggt gcaagccacg tggagcttgc cgctgaccgc cggtcgcctg cacgcgcaac
      961 tgcgcgcgat cggggcgatc agcgctgaaa gcgtcgacga gcagggctgg aaactcgaga
     1021 tcgacgctgc gcggcgcgtg ctggcgccgc tcggcgcggg caccgcgcag gacgcggtgc
     1081 tggtgcgcgg cctgctcggc gcggcgcggg ccgatgatga cgcgctctgc tagaatcccg
     1141 acggtttgcg cgaccgaaac cgttcggcgc cccctgacag gcagcttggt cacgctcgat
     1201 gcgattcatg tcccaaccga cccgttccgg cgcgatgtgc cggcctcccc gcagcctgac
     1261 ggagactgac catggcatgg aatgagcccg gtggcgggca gcgcgatccg tggaaccggc
     1321 agcgccccag cggcaacaag ttctcgcccg accaactgct caagcagttc ggcaagctgt
     1381 tcggcggctt cggccgcggt cccggcaaca ttgccaccgc gatcatcgtg ctggtcgtcg
     1441 tgggcctgct gatgagcagc tacaccatca tcggcgcgcg ccaggtgggc gtggtgctgc
     1501 gcttcggcga gtacacgcgc acgctgccgc cggggttcca cctgaagctg ccggtgccga
     1561 tcgagacggt ggacaaggtc gaggccacgc gcatccgctc gctcaacgat cgcatgtcga
     1621 tgctgacccg cgacgagaac atcctcacca tcgacttcac cgtgcagtac caggtggacg
     1681 acgcgcgcaa gtacctgttc tcggtgagcg accccgacgc cagcgtcggc gcggcggccg
     1741 aggccgcggt gcgctcggtg atcggcggca gcgacatgga ccaggtcctc tccgccgccg
     1801 gcgccaacct tgtcaccgac gcgcagcagg cgctgcagca cacgctcgac atctatcaca
     1861 gcggcttgcg cgtgaccgag gtgagtttcc agaacgtggc gccgccgacc gaggtgaagg
     1921 acgccttcga cgacgtcaat accgcgcgcg aggacaagca aagcaccgag aacaatgcct
     1981 tggcgtacgc caacaaggtg atcccggtgg cccgcggcga cgccgcgcgc atcgccgccg
     2041 aggcggcggg ctacaaggcc gagcgcatcg cacgcgcaca gggcgacgcg gcacgcttcg
     2101 acctgctgct ggcgcagtac aaggcggcgc ccgcggtgac ccgcaagcgc ctgtggctgg
     2161 aaaccatgga agaggtgacg gccgagaacg ccaaggtggt cgacggctcg ggcggccgca
     2221 acatcatcaa cgtgccggtc ggcgtcgcga caccgggcgc gtctgacgcg gccaccaagg
     2281 ctgcggcggc ggcgccagcg gccgcgccga ccgacggtgc gacggcgggc aaggagaagc
     2341 agccatgaag cggatcgtcg ccattgccat cgccgtgttc gtgctgctgc tcgggttgaa
     2401 cagcatgttc gtggtcaacg aggggcagag tgcactgctg ctgcaattcg gccgcatcgt
     2461 gcgtgccgac tatccgccgg ggctgcattt caagctgccg gtgatccagc aggcgctgca
     2521 tttcgacaag cgcatcctgt cgctggatgc gcagcccgag cgctacttca cttcggaaaa
     2581 gaagagcgtc aacgtcgact tctacgttaa gtggcggatc gccgacaacg ccgcgtatta
     2641 ccgtgccacc ggcggtgacg agctgcaggc ggagcagcgc ctgtcgccga tcgtcaagga
     2701 tgcgctgcgc ttcgagttca acgcgcgcac gctgcaggag ctgatctccg gcgggcgcag
     2761 ggacatcacc gagcgcgtgc gccagcagac cgatgcctcg gcccgcaaga acctcggcat
     2821 cgccgtggtc gacgtgcgca tcaagcgtat cgacctgcct gacgaggtca gcgagtcggt
     2881 atacaagcgc atgcgtgccg agcgttcgca gctcgccaac gaattgcgct tcaccggcca
     2941 ggaagcggcc gagaagatca aggccgatgc cgaccgccag ggccaggtgc tgcgcgcgga
     3001 tgcggatcgg gacgccgcca aggtacgcgg cgagggtgac gcccaggcgg cagaaatcta
     3061 tgcgcaggcc tacaatcagg atccggagtt cttcgcgttc tatcgcagcc tcgcggctta
     3121 ccgcaaagcc ttcgaaaacg gcaagagcgt gctgatcctc aagccggatt cggaattcct
     3181 gcattacttc gagaagccgg acaccggcaa gcattgacgg cgtgacgccg gtagtcaggc
     3241 ctcgcactgc ggggccgggt gatgtggtgg gccacggaag gcgaatccag tcaccgtcgt
     3301 cgccccaccg cgggcgaaca acttgagcga gaacatcatg ggcaagtcag tagtcatcct
     3361 tggcgcgcag tggggcgatg agggcaaggg caagatcgtc gacctgctga ccggtcgggt
     3421 cggtgcggtg gcgcgtttcc agggcggcca caacgccggg cacacgctgg tcatcaaggg
     3481 caagaagacg gtgctgcacc tgatcccgtc gggcatcctg cgcgacgacg cgctgtgcct
     3541 gatcggcaat ggcgtcgtgc tgtcgccgga ggcgctgatc caggagatcg cggcgctcga
     3601 ggccaacggc gtcgaggtgc gctcgcgggt gaagatcagc ccggcgacgc cgctgatcat
     3661 gccgtaccac attgcgctgg acaaagcgcg cgaggcggca gcgggcaagg gcgcgatcgg
     3721 caccaccggg cgcgggatcg gcccggccta cgaggacaag gtggcacggc gctcgatccg
     3781 cgtcgccgac ctgatgtacc cgcacgagct gccaaagaag ctcaaggccg tggtggccta
     3841 tcacaa
//
LOCUS       DASSVL010000569         2627 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_902898, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000569 DASSVL010000000
VERSION     DASSVL010000569.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2627)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2627)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2627
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_902898"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(108..>2627)
                     /locus_tag="VFM52_09955"
     CDS             complement(108..>2627)
                     /locus_tag="VFM52_09955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019465571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HET8765531.1"
                     /translation="ADTAQGVDYWADQLRAPVRFSPALDQVLAEPGRVLLEVGPRAVL
                     TALARQQPRLRAQAAEAVASLGTAVADEVARTRTAVGALWCRAVPVAMAALDHRARRR
                     RLCLPTYPFERQRCWLDAAPAVPAVPAAVVPPFAGDAAVTVTAEPANRIPRLVDRLKP
                     VFEDVSGLDLATADPAANFIELGLDSLMLTQLALQVGKTFAVEVSFRELMSEASSFAT
                     LAALLDRRLPPDAVAPSAAPPATSAPAAVPALPVAVAPLAGGAPGGYVQQVIAQQMQL
                     MAQQLALLGQAGAQPAAAAPLVPGVVTPSAPALVAPAPNEVADEHVHYDVKKAFGAIA
                     RIHAHTGVGELSPRQRGLLDRFIERYVARTQKSKAYTQQHRPHMADPRVVNGFRPLLK
                     EIIYQVVVGRSKGAHLWDLDGNEYVDALNGFGMSLFGWQPDFVLDAIREQLDLGYEIG
                     PQHPLAGEVADLVCEITGADRAALCNTGSEAVLGAIRIARTVTGRETIVLFSGSYHGI
                     IDEVIVRGTRKLTAVPAAPGILRNTAAHVLVLDYGTPESLAVIREHAHELAAVLIEPV
                     QSRRPDFQPVDFLREVRQITAESGALCVFDEIVTGFRCHPGGTQALFGIQADIATYGK
                     VIGGGYPIGVIAGKRQYMDALDGGQWQYGDDSIPTVGVTYFAGTFVRHPLALAAAKAA
                     LLHLKQAGPALQERLTARTAAFADELNGFCIASGAPIEIKQFASLWRIQFSEENPLQD
                     LLFAMMRNRGVHILDHFPCFFTTAHSEADCRQIAEAFKDSVRELQEAGFLSRKVVDTP
                     AVMDAANPPVPGARLGRAPDGTPCWFVPNPAEPGKYLKVEP"
BASE COUNT          419 a          927 c          901 g          380 t
ORIGIN      
        1 ctcgcgctgc gcttcggtgc tggccaccac gcgcgccagc gccggcgcgg cgaacgggtc
       61 gtagtcgacg gcggtcgcac ccgattcgtt gccagtcagc gtgacgttca tggctccacc
      121 ttgaggtact tgcccggctc cgccggattg ggcacgaacc agcacggcgt gccatccggt
      181 gcgcgcccga gccgggcgcc cggcaccggc gggtttgccg catccattac cgccggcgtg
      241 tcgaccacct tgcgcgacag gaacccggcc tcctgcaatt cacgcaccga atccttgaac
      301 gcttcggcga tctggcggca gtccgcctcg ctgtgcgcgg tggtgaagaa acacgggaag
      361 tggtcgagga tgtgcacgcc gcggttgcgc atcatggcga acagcagatc ctgcagcggg
      421 ttttcctcgc tgaactggat gcgccacagc gaggcgaact gcttgatctc gatcggcgcg
      481 ccggacgcga tgcagaaccc gttgagctcg tcggcgaagg ccgccgtgcg cgccgtgagg
      541 cgttcctgca atgccggacc cgcctgtttc aaatgcagca gtgccgcctt ggcggccgcc
      601 aacgccagcg ggtggcgtac gaaggtgccg gcgaaatagg tgacccccac ggtggggatt
      661 gaatcatctc cgtactgcca ctgcccgccg tcaagcgcat ccatgtattg ccgcttgccg
      721 gcgatgacgc cgatcggata gccgccgccg atgaccttgc cgtaggtggc gatgtcggcc
      781 tggatgccga acaacgcctg ggtaccgccg gggtggcagc ggaagccggt gacgatctcg
      841 tcgaagacgc acagcgcgcc gctttcggcg gtgatctggc gcacctcgcg caggaaatcc
      901 accggctgga aatccgggcg ccggctctgc accggctcga tcagcacggc ggcgagctcg
      961 tgcgcgtgct cgcggatgac cgcgagcgat tcgggcgtgc cgtagtcgag caccagcaca
     1021 tgcgcggcgg tgttgcgcag gatgcccggc gccgccggca ccgcggtgag cttcctcgtg
     1081 ccacgcacga tcacctcgtc gatgatgccg tggtacgaac cgctgaacag cacgatggtt
     1141 tcgcgcccgg tcaccgtgcg cgcgatgcgg atcgcgccca gcaccgcctc cgaaccggtg
     1201 ttgcacaatg ccgcacggtc ggcgccggtg atctcgcaca ccaggtcggc cacctcgcct
     1261 gccagcggat gctgcgggcc gatctcgtag cccaggtcga gctgctcgcg gatcgcatcc
     1321 agcacgaaat ccggctgcca gccgaacagg ctcatgccaa agccgttcaa cgcgtccacg
     1381 tattcgttgc catccaggtc ccacaggtgc gcgcccttcg agcgccccac caccacctgg
     1441 tagatgatct ccttgagcag cggccggaac ccgttcacca cgcgcgggtc ggccatgtgc
     1501 gggcgatgct gctgggtgta ggccttcgat ttttgcgtgc gcgccacgta gcgctcgatg
     1561 aagcgatcca gcaacccgcg ctggcggggc gacagctcgc ccacgccagt gtgcgcgtgg
     1621 atgcgcgcga tcgcgccaaa cgccttcttg acgtcgtagt gcacgtgttc gtcggcaacc
     1681 tcgttcggcg caggcgccac gagtgccggc gcgctggggg taaccacgcc aggcaccagc
     1741 ggcgcagcgg cggcgggctg cgccccggcc tggccaagca acgcaagttg ctgcgccatc
     1801 agttgcatct gctgcgcgat cacctgctgc acgtagccgc ccggcgcacc acccgccagc
     1861 ggtgcaaccg ccaccggcaa ggccggcacc gcagccggcg cactcgttgc cggtggcgcc
     1921 gcagacggcg ccaccgcatc cggcggcagg cggcgatcga gcagcgcggc cagcgtcgcg
     1981 aaggaagacg cctcgctcat caactcgcgg aagctgactt ccaccgcaaa cgtcttgccc
     2041 acctgcagcg cgagctgggt aagcatgagg ctgtccagcc ccagctcgat gaagttggcc
     2101 gccgggtcgg cggtggccag gtcgaggccg gaaacatcct cgaataccgg cttcaaccgg
     2161 tcgaccaggc gcgggatacg gttggcgggc tcggcagtca cggtcacggc agcatctccg
     2221 gcaaaaggcg gcacgacggc ggcgggcacg gcgggcacgg cgggcgcggc atcgagccag
     2281 caccgctgcc gctcgaaggg ataggtgggc agacacaggc gtcggcgccg tgcgcgatga
     2341 tcgagcgccg ccatggcgac cggtaccgcg cggcaccaca gggcgccgac cgcagtacgc
     2401 gtccgcgcca cctcgtcggc caccgcggta ccgagcgacg ccaccgcctc ggcagcttgc
     2461 gcgcgcagcc gcggctgctg gcgcgccagc gcggtgagca cggcgcgggg accgacttcg
     2521 agcagcacgc ggccaggctc ggcgagcacc tggtcgagcg ccggcgagaa ccgcaccggc
     2581 gcgcgcaatt gatccgccca gtaatcgacg ccctgtgcgg tgtcggc
//
LOCUS       DASSVL010000570         2999 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1001703,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000570 DASSVL010000000
VERSION     DASSVL010000570.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2999)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2999)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2999
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1001703"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..213
                     /gene="ruvX"
                     /locus_tag="VFM52_09960"
     CDS             <1..213
                     /gene="ruvX"
                     /locus_tag="VFM52_09960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010344125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction resolvase RuvX"
                     /protein_id="HET8765532.1"
                     /translation="LQQRYDLLVVLVDERHSSQEAAQRFAAGRAAGLRRRRDAADIDA
                     EAAAVILERWLAAPDSSFPLVSATTP"
     gene            210..1136
                     /locus_tag="VFM52_09965"
     CDS             210..1136
                     /locus_tag="VFM52_09965"
                     /EC_number="2.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008435792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004070 - aspartate carbamoyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0016597 - amino acid binding [Evidence
                     IEA];
                     GO_process: GO:0006207 - 'de novo' pyrimidine nucleobase
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate carbamoyltransferase catalytic
                     subunit"
                     /protein_id="HET8765533.1"
                     /translation="MTPHLRHLTTLENLSRATIEHLLDRAIAMRDACAHGTRKLDLLA
                     GRTVLNLFFEPSTRTRTSFELAARRLGADVVNFNIGVSSTTKGETLYDTLHTLEAMHL
                     DAIVVRHKVDGTPDELVRHAMSGVSIVNAGDGHRAHPTQGLLDALTIRQHRPDFENLT
                     VTICGDIRHSRVARSDVHALTALGVREIRFCGPAGLLPAASEFPQVRYGNDFDAAIEG
                     ADVAIMLRLQKERMAATELPDEAAYFARYGLDARRLARAGRGCLVMHPGPLNRGIEIT
                     DEVADGPQSRILEQVANGVFVRMAVLGELLAR"
     gene            1200..2996
                     /locus_tag="VFM52_09970"
     CDS             1200..2996
                     /locus_tag="VFM52_09970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015446999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8765534.1"
                     /translation="MHPRTRLAALALAGLVLAACSHKDKNAPLAFVPADTPYAVANLE
                     VLSDDTRAALLAQADLQLPSQVAQMEAFAARIAAKDPQAARLVDAFAAELKGKTIAAF
                     AAANGIDLKGRFALYGEDMAPVVRVELTDPRAFNAFVGRLEAAWGSKLATASIGNQSY
                     RLQAFPKLGTELVLGVVGRQMVAALLPANADTPMLRRTLGIDRPAKSLQDAGRLAKLA
                     KDKGYAKWLVGELDLTRALPLVVGGDGPFIAALRQARAEAESAQTGEPVANLLKTAPS
                     CAPEAARIAARVPTLSFGYTRLDAKHQDGRFDMALANDVAKAFSGLRIALPGLGTDGD
                     NAAPFDLSLALPVTDLRKFWSAQVDAVKAKPFTCPTLVSLNDTFAKLGDALPKAAIPP
                     FGSLVGVRIALDSLAADKASSLPDFTGRIVFGTSDPDGLLATGQLMLPALASVKPPAN
                     GTPVPMPKELNTIFGQPAWIATSPKALALGIGAGEQNRIAGMLHESAGSAGQLARMHL
                     AGSMYLDWLKFMEQKADNFAAAAAEMGKSDVPAIDGATPDEDAAQAAADAARSKAQFA
                     SMEANAQRVQSIDAEMHVNDDGLVVTSHTLYK"
BASE COUNT          499 a         1115 c          973 g          412 t
ORIGIN      
        1 ctgcagcagc gctacgacct gctggtggtg ctggtcgacg aacggcacag ctcgcaggaa
       61 gcggcgcaac gtttcgccgc cggccgcgcc gccgggctca ggcgccgccg cgatgccgcc
      121 gacatcgacg ccgaagccgc cgccgtcatc ctcgaacgct ggctcgcggc tcccgattcc
      181 tcgtttcccc tcgtttccgc caccacacca tgacccctca tctgcgccac ctcaccacgc
      241 tggaaaacct ctcgcgcgcc acgatcgaac acctgctcga ccgcgcgatc gcgatgcgcg
      301 acgcctgcgc acacggcacc cgcaagctcg acctgctggc cgggcgcacc gtgctcaacc
      361 tgttcttcga gccgtccacc cgcacccgca cctcgttcga gctggccgcg cgccggctcg
      421 gtgccgacgt ggtgaacttc aacatcgggg tttcctccac caccaagggc gagaccctgt
      481 acgacacgct gcacacgctg gaggcgatgc acctcgacgc catcgtcgtg cgccacaagg
      541 tggacggcac gccggacgag ctggtgcgcc acgcgatgag cggagtgtcc atcgtcaatg
      601 ccggcgatgg ccaccgcgcg caccccaccc agggcctgct cgacgcgctg accatccgcc
      661 agcaccgccc ggatttcgag aacctgacgg tgaccatctg cggcgacatc cgccactcgc
      721 gcgtggcacg ctccgacgtg cacgcgctga ccgcgctcgg ggtcagggag atccgcttct
      781 gcggcccggc cggcctgttg ccggcggcga gcgagttccc gcaggtgcgc tacggcaacg
      841 atttcgacgc cgccatcgaa ggcgccgacg tggcgatcat gctgcgcctg caaaaagagc
      901 gcatggcggc caccgaactg ccggacgaag ccgcgtattt cgcccgctac ggcctcgacg
      961 cgcgccgcct cgcgcgcgcc ggccgcggct gcctggtgat gcaccccggc ccgctcaacc
     1021 gcggcatcga gatcaccgac gaggtggccg acggcccaca gtcgcgcatc ctcgaacaag
     1081 tcgccaacgg cgtgttcgtg cgcatggcgg tgctcggcga gctgctcgcg cgctgaccgc
     1141 gaagcggcgc gcaaagcagg cataatgcgc gctgcaacac cctattggcg gaatccatca
     1201 tgcatccacg gacgcgcctc gctgccttgg cgctggccgg cctcgtgctg gcagcctgct
     1261 cgcacaagga caagaacgcg ccactggcct tcgtgccggc ggacacgccc tacgcggtcg
     1321 ccaacctcga agtactcagc gacgacacgc gcgctgcgct gctggcccag gccgacctgc
     1381 agctgccctc gcaggtggcg cagatggaag catttgccgc ccgcatcgcc gccaaggatc
     1441 cgcaggccgc gcggctggtg gacgcgtttg ccgccgagct caagggcaag accatcgccg
     1501 ccttcgcggc ggccaacggc atcgacctca aggggcgctt cgcgctgtac ggcgaggaca
     1561 tggcgccggt ggtgcgcgtc gagctgaccg accccagggc gttcaacgcc ttcgtcggcc
     1621 ggctcgaagc ggcctggggc agcaagctcg cgaccgccag catcggcaac cagtcctacc
     1681 gcctgcaggc gtttcccaag ctcggcaccg aactggtgct gggcgtggtc ggcaggcaga
     1741 tggtcgcagc gctgctgccg gccaatgccg acacgccgat gctgcgccgg acgctcggca
     1801 tcgaccgccc ggccaagagc ctgcaggacg ccggccgcct cgccaagctg gccaaggaca
     1861 aggggtacgc gaagtggctg gtcggcgagc tcgacctgac ccgcgcgttg ccgctggtcg
     1921 tcggcggcga cggcccattc atcgcggcgc tgcgccaggc gcgtgccgaa gccgagtcgg
     1981 cgcagaccgg cgaaccggtc gcgaacctct tgaagaccgc gccgagctgt gctcccgagg
     2041 ccgcacgcat cgccgcccgc gtgcccacgc ttagcttcgg ctacacccgg ctcgacgcca
     2101 agcaccagga cggccgcttc gacatggcgt tggccaatga cgtcgccaag gcgttcagcg
     2161 gcttgcgcat cgccctgccc ggcctcggca ccgatggcga caacgcggca ccgttcgacc
     2221 tcagcctggc actgccggtg accgatctgc gcaaattctg gtcggcccag gtggatgcgg
     2281 tgaaggcgaa gccgttcacc tgcccgacgc tggtgagctt gaacgacacc ttcgcgaagc
     2341 tcggcgatgc attgccgaag gcggcgatcc cgccgttcgg cagcctggtc ggcgtgcgca
     2401 tcgcactgga cagcctggcc gccgacaagg ccagcagcct gcccgacttc accggtcgca
     2461 tcgtgttcgg caccagcgat cccgatggcc tgctggccac cggccagctg atgctgccgg
     2521 cattggccag cgtcaagccg cccgccaacg gcacgccggt gccgatgccg aaggagctca
     2581 acaccatctt cggccagccg gcatggatcg caaccagccc gaaggcgctc gcgcttggca
     2641 tcggcgcggg cgaacagaac cgcatcgccg gcatgctgca cgaatcggcc ggcagcgccg
     2701 gacagctggc acgcatgcac ctggccggca gcatgtacct cgactggctg aaattcatgg
     2761 agcagaaggc cgacaacttt gccgcggccg ctgcggagat gggcaagagc gacgtgccgg
     2821 cgatcgatgg tgcgacaccg gacgaggacg ccgcgcaagc cgccgcggac gccgcacgca
     2881 gcaaggcgca attcgcttcg atggaggcca atgcccagcg cgtgcaatcg atcgacgccg
     2941 agatgcacgt caacgacgat ggcctggtgg tgaccagcca caccctctac aagtgacgt
//
LOCUS       DASSVL010000571         2083 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1086838,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000571 DASSVL010000000
VERSION     DASSVL010000571.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2083)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2083)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2083
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1086838"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(139..1065)
                     /locus_tag="VFM52_09975"
     CDS             complement(139..1065)
                     /locus_tag="VFM52_09975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008435283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HET8765535.1"
                     /translation="MDLATASSVLRLLADPTRVRLLALLEHEELTVAELAAVLHLAQP
                     RVSTHLAKLKEAGLVRDRRAGVSAYYRANNEGDERQHALIASLRENIDDALLREDATR
                     LPAVLANRARAEGWADSVAGDMERHYSPGRTWETLARALLQLLGTGDVLDIASGDGIT
                     AELLAPHAHSIVCVDSGERVVEAAAKRLQAFSNVEVRQGDMHALDLGERRFDLVLMLH
                     ALTYAERPAQAVAEAARVLRPGGRLLAVTLGKHDHRAVVEPFDHKNLGFTEAALRGHA
                     NAAGLTVVSCNRLSRERKAPHFEVISLLAQKK"
     gene            1198..>2083
                     /locus_tag="VFM52_09980"
     CDS             1198..>2083
                     /locus_tag="VFM52_09980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HET8765536.1"
                     /translation="MDFRFTEDQLSIQSVARDFAQKRIVPVAAELDAKGEFPLENIRE
                     MGQLGLMGIEVPEAYGGAGMDPIAYVLAMIEIAAADAATATVMSVNNSLFCNGILKHG
                     NEEQKQKYVRAIATGEAIGAYALTEPQSGSDASAMHTRATKNANGDWVINGKKSWITS
                     GPVARYIVLFAISTPGIGAKGVSAFIVDTQLPGFHAGKTEPKLGIRASATCEIEFTDY
                     VLPKENLLGEEGKGFSIAMGVLDAGRIGIASQAVGIARAAYEATLQWTRDRKAFGAPI
                     GTFQMTQAKVADMKCKLDA"
BASE COUNT          327 a          704 c          734 g          318 t
ORIGIN      
        1 cgggtgccgg tcaggccgtg ctgctcggcg cgcccggcgt ccagccggta gccaggcacg
       61 ttgagccggg ccagttcggc ttcgagcgcg gccacgcgcg cggggtggag ccagggcagg
      121 gtgttcatgc gttctccctc actttttctg cgcgagcagg ctgatgactt cgaaatgcgg
      181 cgccttgcgc tcgcggctca ggcgattgca gctcaccacc gtgagtccgg cggcgttggc
      241 gtggccgcgc aatgccgctt cggtgaagcc gaggttcttg tggtcgaacg gttccaccac
      301 cgcgcggtgg tcgtgcttgc ccaacgtcac cgcgagcagg cgcccaccgg ggcgcagcac
      361 gcgggcggcc tcggcaacgg cctgcgcggg gcgctcggcg taggtgagcg catgcagcat
      421 cagcaccagg tcgaagcggc gctcgcccag atccagcgcg tgcatgtcgc cctggcgcac
      481 ctccacgttg gagaaggcct gcaggcgctt cgcggcggcc tcgaccacgc gctcgccgga
      541 atccacgcag acgatggaat gcgcgtgcgg cgccagcagc tcggcggtga tgccgtcgcc
      601 ggaggcgatg tccagcacgt cgccggtgcc caggagttgc agcaatgcgc gcgccagcgt
      661 ttcccaggtg cggcccggcg aatagtgccg ctccatgtcg ccggccacgg aatcggccca
      721 gccttcggcg cgggcgcggt tggccagcac ggcgggcagc cgggtggcat cctcgcgcag
      781 cagggcgtcg tcgatgttct cgcgcagcga ggcgatcagc gcgtgctggc gttcgtcgcc
      841 ctcgttgttg gcgcggtagt aggcggagac gccggcgcga cggtcgcgca ccaggccggc
      901 ctccttcagc ttggccaggt gggtggacac gcgtggctgc gccaggtgca ataccgcagc
      961 cagttcggcc acggtgagtt cctcgtgttc gagcagggcc agcaggcgca cacgggtggg
     1021 gtcggccagc aggcgcagca cgctggaagc ggtggccaga tccatcggta tccctgtatc
     1081 gcgatacaaa gatgtacagg ctaggccgcg ccttgccacg cgtcaagcgc gcgccgccgg
     1141 gtccgtcggc catttcccgc taaaattggc ggctcgattg tctttaggag cccgcccgtg
     1201 gatttccgtt ttaccgaaga ccagttgtcg atccagtccg ttgcccgtga ttttgcgcag
     1261 aagcgcatcg tgccggtggc cgccgagctg gacgccaagg gcgagttccc gctggagaac
     1321 atccgcgaga tgggccagct cggcctgatg ggcatcgagg tgccggaggc ctacggcggc
     1381 gcgggcatgg acccgatcgc ctacgtgctg gcgatgatcg agatcgccgc cgccgacgcc
     1441 gccaccgcca ccgtgatgag cgtgaacaat tcgctgttct gcaacggcat cctcaagcac
     1501 ggcaacgagg agcagaagca gaagtacgtg cgcgcgatcg ccaccggcga ggcgatcggc
     1561 gcctacgcgt tgaccgagcc gcagtccggc tccgacgcct cggccatgca cacccgcgcc
     1621 acgaagaacg cgaacggcga ctgggtgatc aacggcaaga agagctggat cacctccggc
     1681 ccggtggcgc gctacatcgt gctgttcgcc atctccacgc cgggcatcgg cgccaagggc
     1741 gtgtcggcct tcatcgtcga cacccagctg ccgggcttcc acgccggcaa gaccgagccg
     1801 aagctgggca tccgcgcctc ggccacctgc gagatcgagt tcaccgacta cgtgctgccg
     1861 aaggagaacc tgctcggcga agagggcaag ggcttctcga tcgcgatggg cgtgctcgac
     1921 gccggccgca tcggcatcgc ctcgcaggcg gtgggcatcg cccgcgccgc atacgaggcg
     1981 acgctgcagt ggacgcgtga ccgcaaggcc ttcggcgcac ccatcggcac cttccagatg
     2041 acccaggcca aggtcgccga catgaagtgc aagctggacg ccg
//
LOCUS       DASSVL010000572         2192 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1086855,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000572 DASSVL010000000
VERSION     DASSVL010000572.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2192)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2192)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2192
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1086855"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..557)
                     /locus_tag="VFM52_09985"
     CDS             complement(<1..557)
                     /locus_tag="VFM52_09985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007806360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPFH domain-containing protein"
                     /protein_id="HET8765537.1"
                     /translation="MHEHKGFSLAGIPMVGLVLVLLAVAGWRLFAAAAQASASAIPAL
                     AIGLIIVAAILASGFFQVAPNEARVLQLFGKYAGSVRDEGLRWTNPLCTKRKLSLRVR
                     NFESGKLKVNDLDGNPIEIAAVVVWQVVDSAEAVFCVDDYENFVHIQSESALRQMAQN
                     YPYDAHDDHKPSLRSHGEVINNHLR"
     gene            784..>2192
                     /locus_tag="VFM52_09990"
     CDS             784..>2192
                     /locus_tag="VFM52_09990"
                     /EC_number="1.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017461315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015930 - glutamate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0016638 - oxidoreductase activity, acting
                     on the CH-NH2 group of donors [Evidence IEA];
                     GO_process: GO:0006537 - glutamate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FMN-binding glutamate synthase family protein"
                     /protein_id="HET8765538.1"
                     /translation="MQTTGFSHWLIVLVETFAALFLLLLALAVVVLATVWLVDRNQTG
                     NAVLRNFPLIGHFRYWFLHLGEFFRQYLYSNDREELPFNRAQRVWVYRAAKNADNTRA
                     FGSTRDLRTEGMPFFVNAAFPSLGDTHVEPKPVRIGPYARAPYDHAAFFNISAMSVGA
                     LSAPAVRALSIGAAKAGIWMDTGEGGLAPYHLEGGCDVIFEIGTAKYGVRTPDGKLDD
                     EKLQAVCAHPQVKMVSVKLGQGAKPGMGGLLPGAKVTPEIAAIRGIPVGEDSQSPNRH
                     LDIANERELLDFIHHVRELTGKPTGFKAVFGSMGMIETLCDEIKARGIESAPDFIIVD
                     GSEGGTGAAPQTLMEGVGLPLHEALPMLVNTLIERGLRERIKVICSGKCITAYDVAWA
                     LSMGADFVNSARGFMLSLGCIQALQCNRNTCPTGITTQNPTLQRGLVVTDKCEKVANY
                     AKNVMHEVGIIAHSCGVDDP"
BASE COUNT          378 a          704 c          744 g          366 t
ORIGIN      
        1 tcgcgcagat ggttgttgat cacttcgcca tggctgcgca gcgagggctt gtggtcgtca
       61 tgcgcgtcgt acgggtagtt ctgcgccatc tggcgcagcg ccgactcgct ctggatgtgc
      121 acgaagttct cgtagtcgtc cacgcagaac accgcctcgg cgctgtccac cacctgccac
      181 accaccacgg cggcgatctc gatcgggttg ccgtcgaggt cgttgacctt gagcttgccg
      241 ctctcgaagt tgcgcacgcg cagcgagagc ttgcgcttgg tgcacagcgg gttggtccag
      301 cgcaacccct cgtcgcgcac gctgccggcg tatttgccga agagctgcag cacccgcgcc
      361 tcgttcggcg cgacctggaa gaagccgctg gcgaggatgg cggccacgat gatcaagccg
      421 atcgcaagcg ccgggatggc gctggccgat gcctgcgcag cagccgcaaa caaccgccag
      481 ccggccacgg ccagcaacac cagcaccagc ccgaccatcg ggatgccggc aagcgagaaa
      541 cctttgtgtt cgtgcatgga ccgtctccgt ctggggtggc ggaaagtaga tatcaaaaag
      601 atatcaacta caagtgccac gatgccagcc ttgaagcctc ctgttcaagg agaggtttgg
      661 aggggatggg gttcatcgcc gtacggcgaa aggtccgccg cccacgggcg cgagggctcg
      721 cgattcgatt tccgccgcgc cagcacctac gctggggcgc atcgcatcga caggagccat
      781 tccatgcaga ccacgggctt ttcgcactgg ctgatcgtgt tggtggagac gtttgccgcg
      841 ctgttcctgc tgctgctggc gctggcggtg gtggtgctgg cgacggtgtg gctggtcgac
      901 cgcaaccaga ccggcaacgc ggtgctgcgc aactttccgc tcatcggcca cttccgctac
      961 tggttcctgc acctcggcga gttcttccgc cagtacctgt attcgaacga ccgcgaggag
     1021 ttgccgttca accgcgcgca acgggtgtgg gtgtaccgcg cggcgaagaa cgcggacaac
     1081 acccgcgcgt tcggctccac ccgcgacctg cgcaccgaag gcatgccgtt cttcgtcaat
     1141 gcggcgtttc cgtcgttggg cgacacgcac gtggagccga agcctgtgcg catcgggccg
     1201 tacgcacgcg cgccgtacga ccacgcggcg ttcttcaaca tctcggcgat gagcgttggc
     1261 gcgctgtccg cgccggcggt gcgtgcgctg tcgatcggcg cggcgaaggc cggtatctgg
     1321 atggataccg gcgagggcgg gctggcgccg tatcacctgg aaggcggctg cgacgtcatc
     1381 ttcgagatcg gcaccgcgaa atacggcgtg cgcacgccgg acggcaagct cgacgacgag
     1441 aagctccagg ccgtgtgcgc gcacccgcag gtgaagatgg tgtcggtcaa gctcggccag
     1501 ggcgcgaagc cgggcatggg cggcctgctg ccgggggcca aggtgacgcc ggaaatcgcc
     1561 gcgatccgcg gcattcccgt gggcgaggat tcgcagagcc cgaaccgcca cctggatatc
     1621 gcgaacgaac gcgagctgct cgatttcatc caccacgtgc gcgagctgac cggcaagccg
     1681 actggcttca aggcggtgtt cggcagcatg ggcatgatcg agacgctgtg cgacgagatc
     1741 aaggcgcgcg gcatcgagag cgcgccggat ttcatcatcg tcgacggctc cgagggcggt
     1801 accggcgccg cgccgcagac gctgatggaa ggcgtcggcc tgccgctgca cgaggcgctg
     1861 ccgatgctgg tcaatacgct gatcgagcgc ggcctgcgcg agcgcatcaa ggtgatctgc
     1921 tcgggcaagt gcatcaccgc gtacgacgtg gcgtgggcgc tgtcgatggg cgcggatttc
     1981 gtcaactcgg cgcgcggctt catgctctcg ctgggctgca tccaggcgct ccagtgcaac
     2041 aggaacacct gcccgaccgg catcaccacg cagaacccca cgctgcagcg cggcctggtg
     2101 gtcaccgaca aatgcgagaa ggtggcgaac tacgcgaaga acgtgatgca tgaggtgggc
     2161 atcatcgccc acagctgcgg cgtcgacgac cc
//
LOCUS       DASSVL010000573         3596 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1298702,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000573 DASSVL010000000
VERSION     DASSVL010000573.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3596)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3596)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3596
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1298702"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1769)
                     /locus_tag="VFM52_09995"
     CDS             complement(<1..1769)
                     /locus_tag="VFM52_09995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008435354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AsmA family protein"
                     /protein_id="HET8765539.1"
                     /translation="MKRTHKRLAWIIGVPVTALVMLASALVITLSLFNWNRLKPTINA
                     QASMAIGRPFAINGNLGVQWMRDASSQGWRAWVPWPHIVAQDISVANPAWTKQPRFAH
                     LDALRFSLSPLDLLQHRVRIPTLQLVNPGVDLERDAQGRTNWTFNLPQGSTPSAWTVD
                     LGAVGFDTGRITLDDAVGRVKVDAHIEPLQQAIPYGQIVAQATADARAQATSSAGRDA
                     GKAMGKPGEPNQPEDAAAQQTRYQFAWTAKGSYQGAALDGSGRIGAVLALQQSDQPFP
                     LQAKLRIGDTHIALVGTLTDPIHLGALNLHLWLAGSSMAKLYPILGVTLPDTPPYATR
                     GRLTATLGRHGSQFGYHGFRARVGGSDLAGDVDYVTGGARPKLSGKVQATLLRFADLA
                     PLIGGGGSSTTAPPPAASDRVLPTQAFRTDRWKAMDANVTFAAGRIEHGPSLPIQSLS
                     THLVMDGGVLTLDPLHFGVAGGQVTGMLRLDGSAEPMRGRLKLGVRRLRIEQLSQRFA
                     AMRTSLGAINGDAALDARGNSVAGLLGTASGQLKLLMDNGAISRNLLEMAGLNVGNIV
                     LGKLFGDKTVKIDCAASDFVAKDG"
     gene            complement(1951..2529)
                     /locus_tag="VFM52_10000"
     CDS             complement(1951..2529)
                     /locus_tag="VFM52_10000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007512896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipid methyltransferase"
                     /protein_id="HET8765540.1"
                     /translation="MPLSDTLHLLRAWLRHPRSVGALAPSGPTLARLMTAHLDHAHGP
                     VIELGPGTGVFTRALLEHGLPGHRLVLVETDPVLAGTLARRYPHARVLRMDAVRLGHS
                     SSLFGAERASAVVSGLPLRSIPADKVEAIIAGVFERQLQDDGVLYQFTYGLRCPVSRT
                     LRQRLGLEAERIGSTWRNLPPARVWRIRRRAG"
     gene            complement(2681..3595)
                     /locus_tag="VFM52_10005"
     CDS             complement(2681..3595)
                     /locus_tag="VFM52_10005"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008213029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_process: GO:0000413 - protein peptidyl-prolyl
                     isomerization [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HET8765541.1"
                     /translation="MALALGGLLAALPGIAADKPTPTTKELLAASKPAEWRTPDPANL
                     LYMQLPQGRVVIELAPAFTPLHAANIRTLVRQGYFDGLSINRVQDNFVTQWDDPETDG
                     DHRDPAKLKPLGKAKATLPPEFTRAIDAKQPWTPLPDGDVYAPQVGFSGGFPVARDPA
                     DGKEWLVHCYGMVGVGRDVAPDSGNGSALYAVIGQAPRRLDHNLAVVGRVLQGMPYLS
                     ALPRGTGPMGFYAKASERTVILSVKLAADLPPAQREHIQVLRTGSPTFAALIDAARNG
                     HNAFYPTPVGKLGICGISAPVRVNGKPL"
BASE COUNT          515 a         1216 c         1303 g          562 t
ORIGIN      
        1 ccatccttcg ccacgaagtc gctggcggcg cagtcgatct tcaccgtctt gtcgccgaac
       61 agcttgccga gcacgatgtt gcccacgttg aggccggcca tttccagcag gttgcggctg
      121 atcgcgccgt tgtccattag cagcttcagc tggccgctgg cggtgccgag caggccggcg
      181 acggaattgc cgcgcgcgtc cagcgcggcg tcgccgttga ttgcgccgag gctggtgcgc
      241 atcgccgcga agcgctgcga caactgctcg atgcgcaggc ggcgcacacc cagtttcagc
      301 ctgccgcgca tcggctccgc gctgccgtcg agacgcagca tgccggtcac ctggccgccg
      361 gccacgccga agtgcagcgg gtccagcgtg agcacgccgc cgtccatcac gaggtgggtg
      421 gacaacgact ggatcggcag cgacgggccg tgttcgatgc gcccggcggc gaacgtcacg
      481 ttggcatcca tcgccttcca gcggtcggtg cggaaggcct gcgtgggcag cacgcgatcc
      541 gacgccgcgg gcggcggtgc cgtggtgctg gaaccgccgc cgccgatcag tggcgcgagg
      601 tcggcgaagc gcagcagcgt ggcctgcact ttgccgctga gcttcgggcg tgcgccgccg
      661 gtgacgtagt cgacgtcgcc ggcgaggtcg ctgccgccca cgcgtgcgcg gaaaccgtga
      721 tagccgaact ggctgccgtg gcgccccagc gtggcggtaa ggcggccacg ggtggcatag
      781 ggcggcgtgt ccggcagggt cacgccgagg atgggataga gcttcgccat gctggagccg
      841 gccagccaca ggtgcaggtt cagcgcgccc aagtggatgg gatcggtgag cgtgccgacc
      901 agggcgatgt gggtgtcgcc gatgcgcagc ttggcctgca gcgggaacgg ctggtcggac
      961 tgctgcaggg cgagcacggc gccgatcctg ccgctgccgt ccagcgccgc gccctggtag
     1021 ctgcccttgg cggtccaggc gaattggtag cgggtttgct gcgcggctgc gtcttcgggc
     1081 tggttcggct ccccgggctt gcccatcgcc ttgccggcat cgcgtcccgc actgctggta
     1141 gcctgcgcgc gcgcatccgc cgtcgcctgt gccacgatct ggccgtaggg aatcgcctgc
     1201 tgcagcggtt cgatgtgcgc atcgaccttc acgcggccga ccgcgtcgtc cagcgtgatc
     1261 cgcccggtat cgaaaccgac ggcgccgaga tccaccgtcc atgcggaagg tgtgctgcct
     1321 tgtggcaggt tgaacgtcca gttggtgcgg ccctgcgcat cgcgctccag gtccacgccg
     1381 gggttcacca gttgcagggt ggggatgcgc acgcggtgct gcagcaggtc cagcggcgac
     1441 aggctgaagc gcaaggcgtc gagatgcgcg aatcgcggct gtttggtcca cgccgggttc
     1501 gcgacggaga tgtcctgcgc cacgatgtgc ggccacggca cccaggcgcg ccagccctgc
     1561 gatgacgcat cgcgcatcca ctgcacgccg aggttgccgt tgatcgcgaa ggggcggccg
     1621 atcgccatgc tcgcctgcgc gttgatggtc ggcttcagcc tgttccagtt gaacagcgac
     1681 agcgtgatca ccagcgccga ggccagcatg acgagcgcgg tcaccggcac gccgatgatc
     1741 cacgccagcc gtttgtgcgt gcgcttcatg gccgtctcct gcggtcgcgg tgcgaccgat
     1801 ggtggcgatg catcacgggg taaccgatgg catggcaagg tttcgtggtg atgacgggcg
     1861 cccgctcacc atgggttcat gcgcatcgaa tcggcgatgc gccgcacgcg gcgatgccgg
     1921 ccgattccag tcgcggcagg gtgatggccg tcagccggcg cggcggcgga tgcgccagac
     1981 cctggccggc ggcaggttgc gccaggtgct gccgatgcgc tcggcctcca gtcccaggcg
     2041 ctggcgcagc gtgcgcgata ccgggcagcg caggccatag gtgaactggt agagcacgcc
     2101 gtcgtcctgc aattggcgct cgaacacacc cgcgatgatc gcctcgacct tgtcggccgg
     2161 gatcgagcgc aggggcaggc cgctgaccac ggcgctggcg cgctcggcgc cgaacagtga
     2221 cgacgagtga cccagccgga ctgcatccat gcgcagcacg cgcgcatgcg gatagcgccg
     2281 tgccagcgtg ccggccagca ccggatcggt ttccaccagc accagccggt gtcccggcag
     2341 gccatgctcc agcagggccc gcgtgaacac gccggtaccc ggacccagtt cgatcaccgg
     2401 accgtgcgcg tggtcgaggt gggccgtcat cagtcgcgcc agggtggggc cggacggcgc
     2461 cagcgcgccc acgctgcgcg gatggcgcaa ccacgcacgc agcaggtgca gggtgtcgct
     2521 caatggcatc gatggtgggc cgggcggcgc atgcgagcca ccctaatcgc aacgacccac
     2581 ccggatgttc ggataaggtt acgccgccgt gtccggtgtc acgcccagac gttgcccgca
     2641 tgctgcgggc cccgtgccgg gatggcgacg gcgtgccttg tcacagcggc ttcccgttca
     2701 cccgcaccgg cgcactgatg ccgcagatgc ccagcttgcc caccggtgtg ggatagaacg
     2761 cgttgtggcc gttgcgcgcg gcatcgatca atgcggcgaa ggtggggctg ccggtgcgca
     2821 gcacctggat gtgctcgcgc tgcgcgggcg gcaggtcggc cgcgagcttc accgaaagga
     2881 taaccgtgcg ctcggacgcc tttgcataga aacccatcgg gccggtgccg cgcggcagcg
     2941 ccgagagata cggcatgccc tgcagcacgc ggccgaccac cgccaggttg tggtccagcc
     3001 ggcgcggcgc ctggccgatc acggcgtaca gcgcgctgcc gttgccgctg tcgggcgcca
     3061 cgtcgcgacc cacgccgacc atgccgtagc agtgcaccag ccactccttg ccgtcggccg
     3121 ggtcgcgtgc caccgggaag ccgccggaga aacccacctg cggcgcatac acgtcgccgt
     3181 cgggcagcgg cgtccacggt tgctttgcgt cgatggcgcg ggtgaattcg ggaggcaacg
     3241 tggccttggc cttgcccagc ggcttcagct tcgccgggtc gcgatggtcg ccgtcggttt
     3301 ccgggtcgtc ccactgggtg acgaagttgt cctgcacgcg gttgatcgac aagccgtcga
     3361 aatagccttg gcgcaccagc gtgcggatgt tcgccgcatg tagcggcgtg aacgccggcg
     3421 ccagctcgat caccacgcgc ccctgcggca gctgcatgta gagcaggttg gccggatcgg
     3481 gcgtacgcca ctcggcgggc ttcgaggccg ccagcagttc cttcgtggtg ggcgtgggct
     3541 tgtcggcggc gatgccgggc aacgcggcga gcaggccgcc aagggccagc gccaac
//
LOCUS       DASSVL010000574         5294 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_959522, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000574 DASSVL010000000
VERSION     DASSVL010000574.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 5294)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5294)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5294
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_959522"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1247
                     /locus_tag="VFM52_10010"
     CDS             <1..1247
                     /locus_tag="VFM52_10010"
                     /inference="COORDINATES: protein motif:HMM:NF024117.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="PD-(D/E)XK nuclease family protein"
                     /protein_id="HET8765542.1"
                     /translation="PVPLHWYHDDANRGRVAIGAGADATAVARATHEARAEAVRKLYV
                     AVTRASALCVLPYGPTQGCEHSALFHVLQKAGREEALPVDAVGCRAALEELRARADGA
                     VAIVDALPVPPATPKRTPHGDRSRAPLHAHPFDGTRIERDWSVWSFSRLVRGGHGDDT
                     APGAGDRAGIDAAGQAPTLAGPRFGTAVHAVFEHADFAAWRDADGVPAAQRELVERCL
                     RDEGLPPPGMTMAEAAAIAGACISGALNAELPCGVRLCAVAPTARRAEIEFHLSLAPT
                     HTDALLELLHAHGYLTDRTRFNAATLNGLMTGKIDLTFAHAGRFHLIDWKTNLCAAYD
                     ADTLAAEITRHDYDLQWLIYTLALHRWLGQQLPGYAYTRHVGAAYYLFVRGLRAGGGI
                     RSDAPPGALIDAMDRLFAGTTA"
     gene            1244..2944
                     /gene="recD"
                     /locus_tag="VFM52_10015"
     CDS             1244..2944
                     /gene="recD"
                     /locus_tag="VFM52_10015"
                     /EC_number="3.1.11.5"
                     /inference="COORDINATES: protein motif:HMM:TIGR01447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009338 - exodeoxyribonuclease V complex
                     [Evidence IEA];
                     GO_function: GO:0008854 - exodeoxyribonuclease V activity
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease V subunit alpha"
                     /protein_id="HET8765543.1"
                     /translation="MSLVATLVHSHHLRPADARLAAWIARAFPSAPSEAALAAALAAR
                     AVAEGHSALPLDKAQAWLDGLDATAAAPHLPDLPTWRRALAQLPDGLPLVLDAAGRVY
                     LRRYAEYERALAATLVQRASNPYPNVVAAPASALAGTDPEQRHAIEVALKQRLTVITG
                     GPGTGKTYIVMRMLAALAHAAAARGTTLRIALAAPTGKAAARLNETLRAQLATLQLPT
                     EVIAQLEAGTLHRLLGLSPWRATPRHGRAAPLPFDVVVVDEVSMVDLPLMAKLAAAVA
                     DEARLILLGDPQQLAAVEAGDVLGALVAAAARGDLGRCHAALARSHRFGAESALARLA
                     GAVAAGDADAALASLGTDASVALADAATPHALVAAASAAYARVVQAESPAAALDAARS
                     YRVLTALRHGAWGCVALDRAIAAHLVRRLGRPPATHWWQGRLVMVTSNRDELGLYNGD
                     TGVVFADKDGVMKAWFEGPDGQARGFAPAVLPPIEGAFALTVHKAQGSEFECVALATG
                     PASQVLTRELLYTGITRARAALTVYSDAPILHTAIARRGERFGGLADRLHEAAAALPP
                     "
     gene            2962..>5294
                     /locus_tag="VFM52_10020"
     CDS             2962..>5294
                     /locus_tag="VFM52_10020"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013534368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HET8765544.1"
                     /translation="MALHAFHPAVAAWFEATFAQPTPAQREAWPAIRRGEHVLIAAPT
                     GSGKTLAAFLAAIDQLVRAGVAGTLADETAVVYVSPLKALSNDVRINLDAPLAGIRAE
                     LWKGGLPGGEIRTAVRTGDTPQAERTAMRKHPPHIVVTTPESLYILLGSESGRRMLQT
                     TRTVIVDEIHALVSSKRGSHLALTLERLDALCGRRCTRIGLSATQKPIGDVARFLTGG
                     TQCTIIDSGHQRARDLAIELTNVPLQPIMSTDAWGLVYDRLAELIGQHRTTLVFANTR
                     RAVERTTRHLAERLGKDAVAAHHGSLSKEKRLHAEQRLKSGQLQALVATASLELGIDI
                     GEVDLVCQLSSPRSIAAFLQRAGRAGHAVDGISKARLFPTSRDDLAECVALLDCVRRG
                     ELDTLHIPPTPLDVLAQHTVAEVACGERGEAELFELFRRAYPYRELTRATFTSVVRML
                     AEGYSTRRGIRAAYLHRDAVHGRLRARRGARMTALTSAGAIPDTADYDVVLEPQDLRV
                     GSVNEDFAVESMAGDIFQLGNQSYRIMRIERGRVRVEDAHGAPPSIPFWLGEAPGRSD
                     ELSSAVARLREDIATRLEPLSPRERGRGEGSGTQDNPSRESEPSSGASRHLLPEREGK
                     ARAWLVNEVGIGEHAAQQLVDYYAAARIELGLLPTQTTLAMERFFDEAGGMQLVIHSP
                     LGSRLNRAWGLALRKRFCRSFNFELQASATEDAIVLSLSTSHSFPLAEVARYLHSNSV
                     RDVLTQALLDAPMFALRFRWNASAALALPRFAGGRKVP"
BASE COUNT          793 a         1905 c         1817 g          779 t
ORIGIN      
        1 ctccggtgcc gttgcactgg taccacgacg atgccaaccg cggccgcgtc gccatcggcg
       61 ccggcgccga cgcgactgcg gtcgcacgcg ccacgcatga agcgcgcgcc gaagccgtgc
      121 gcaagctgta cgtcgcggtg acgcgcgcca gcgcgctgtg cgtgctgccc tacgggccaa
      181 cgcagggttg cgagcacagc gccctgttcc acgtattgca aaaagccggg cgcgaggaag
      241 cgttgcccgt cgacgccgtc ggttgtcgcg ccgcgctcga ggagctgcgc gcgcgcgccg
      301 atggtgcggt ggcgattgtc gacgccttgc cggtgccacc ggcgacgccg aagcgcacgc
      361 cgcatggcga ccgtagtcgc gcacccttgc acgcccatcc gttcgacggc acgcggatcg
      421 aacgcgactg gtcggtatgg tcgttttcgc gcctggtgcg cggcgggcat ggcgatgaca
      481 ccgcgccggg cgccggcgac cgcgccggga tcgatgccgc cggccaagcg cccacgctcg
      541 cgggcccgcg cttcggcacc gcggtacatg ccgtcttcga acacgccgac tttgccgcat
      601 ggcgcgacgc ggatggcgtg cctgccgcgc aacgcgaact ggtcgagcgt tgcctacgcg
      661 atgagggttt gccgccaccc ggcatgacga tggctgaagc cgcggcaatt gccggtgcct
      721 gcatcagcgg cgcgctcaac gcggagttgc catgcggcgt gcggttgtgc gcggtcgcgc
      781 ccaccgcgcg ccgcgctgaa atcgagttcc atttgtcgct tgcgccgacg cacaccgacg
      841 ccctgctcga actgctgcac gcgcatggtt acctcacgga tcgtacccgc ttcaatgcgg
      901 cgaccctcaa cgggctcatg accggcaaga tcgacctgac gttcgcgcac gccgggcgct
      961 tccacctcat cgactggaag accaacctgt gcgctgccta tgacgcggac acgcttgcgg
     1021 ccgaaatcac gcgccacgat tacgacctgc aatggctcat ctacacgctg gccctgcacc
     1081 gctggttggg ccagcagctg ccgggctacg cgtacacgcg gcacgtgggc gcggcgtact
     1141 acctgttcgt gcgcggcctg cgcgccggtg gcggcatccg cagcgacgca ccccccggcg
     1201 cgctcatcga cgccatggat cgcctgttcg cggggaccac cgcatgagcc tcgtcgcgac
     1261 gcttgtgcat tcgcaccacc tgcggcccgc cgacgccagg ctggcggcct ggatcgcgcg
     1321 cgcgtttccg tccgcgccat ccgaagccgc gctcgcggcg gcgctcgcgg cacgcgccgt
     1381 ggccgaaggg cacagcgcgc tgccgctgga caaggcgcag gcgtggctgg atggactcga
     1441 tgccacggct gccgcaccgc accttccgga tctcccgacg tggcgccgtg cgcttgcaca
     1501 gttgccggat ggactgccgc tggtgctgga cgccgcgggt cgcgtgtacc tgcggcgtta
     1561 tgcagagtac gaacgcgcgc tggccgcaac gctcgtccag cgcgccagca acccgtatcc
     1621 caacgtagtc gccgcgccgg caagcgcgct cgcgggcacc gaccccgaac agcgccacgc
     1681 aatcgaggtg gccctcaagc aacgtctgac cgtcatcacc ggcggtcccg gcaccggcaa
     1741 gacgtacatc gtgatgcgca tgctggcggc gctggcgcac gcggcggcgg cgcgcggtac
     1801 cacgctgcgc atcgcactgg cagcgccgac cggcaaggcc gcggcgcggc tcaacgaaac
     1861 cctgcgcgcg cagcttgcga cgctgcaact tcccaccgaa gtgatcgcgc agctcgaagc
     1921 cggcaccctg catcgcctgt tgggcctgtc gccatggcgc gccacgccgc gccatgggcg
     1981 tgcagcgccg ctgccgttcg atgtcgtcgt cgtcgatgaa gtgtcgatgg tcgacctgcc
     2041 gctgatggcg aagctggccg ccgcggtcgc ggacgaggca cgactgatcc tgctgggcga
     2101 tccgcaacag ctcgccgcgg tggaagccgg cgacgtgctg ggcgcgctgg tggcggccgc
     2161 ggcgcgcggc gacctgggca ggtgccacgc ggcactcgcg cgcagccatc gatttggcgc
     2221 ggagtcggca ctcgcgcggc tcgccggcgc cgttgcggcg ggcgacgccg atgccgcact
     2281 ggcaagcctt ggcacagacg ccagcgtggc gctcgcggac gccgcgacgc cgcacgcact
     2341 ggtcgctgcg gccagcgccg cctacgcgcg cgtcgtgcaa gccgaatccc ccgcagccgc
     2401 actggatgcc gcgcgcagct accgggtgct gacggcgcta cgccatggtg cctggggctg
     2461 cgttgcactc gatcgcgcga tcgcagcgca cctggtgcgc aggcttggtc gtccacccgc
     2521 gacgcactgg tggcagggac ggctggtgat ggtgacctcc aaccgcgacg agctcggctt
     2581 gtacaacggg gacacgggcg tcgtgttcgc ggacaaggat ggcgtgatga aggcgtggtt
     2641 cgaagggccc gacgggcagg cgcgcggatt cgcgccggcg gtgctgcccc cgatcgaagg
     2701 cgccttcgcg ctaacggtgc acaaggcgca gggctccgag ttcgaatgcg ttgcgctggc
     2761 gaccggcccg gcatcccagg tgctgacgcg cgagttgctg tacaccggca tcacgcgcgc
     2821 acgcgcagcc ctcacggtct attccgatgc gcccatcttg cacaccgcca tcgcgcgccg
     2881 cggcgagcgc ttcggcggtc tcgccgatcg cctgcacgaa gcggccgcgg cactcccgcc
     2941 gtgaatcgcg gtctgaccca catggccctg catgccttcc atcccgccgt cgccgcctgg
     3001 ttcgaggcga cgtttgcgca gccaacaccc gcgcagcgcg aagcctggcc ggccatccgg
     3061 cgcggcgagc acgtgctgat cgcggcgccc accggatccg gcaagacgct ggcggcgttc
     3121 ctcgcggcca tcgaccagct ggtgcgcgca ggcgtcgccg gcacgctcgc ggatgaaacc
     3181 gcggtcgtgt acgtgtcgcc gctcaaggcg ctgtcgaatg acgtgcgcat caacctcgac
     3241 gcaccgctgg cgggcatccg cgcggagctg tggaagggcg ggctgccggg aggcgagatc
     3301 cgcaccgcgg tgcgcaccgg cgacaccccg caagccgaac gcacggcgat gcgcaagcac
     3361 ccaccgcaca tcgtggtgac cacgcccgag tcgctgtaca tcctgctggg atcggagtcg
     3421 ggccggcgca tgctgcagac cacacgcacc gtgatcgtgg acgaaatcca cgcgctggtg
     3481 tccagcaagc gcggcagcca cctcgccctg acgctggagc gcctggatgc actgtgtggg
     3541 cggcgctgca cgcgcatcgg cctgtcggcc acgcagaagc ccatcgggga cgtggcacga
     3601 tttctcaccg gcggcacgca gtgcaccatc atcgacagcg gccaccagcg cgcacgcgat
     3661 ctcgccatcg aactgaccaa cgtcccgctg caaccgatca tgagcacgga tgcgtgggga
     3721 ctggtgtacg accgcctggc ggaactgatc gggcaacacc gcaccacgct ggtattcgcc
     3781 aacacgcggc gcgcggtcga gcgcacgacc cgccacctcg cggagcgcct gggcaaggat
     3841 gcggtggccg cgcaccatgg cagcctgtcg aaggaaaagc gcctgcacgc cgagcagcgc
     3901 ctgaagtccg ggcagctgca ggcgctggtt gcaaccgcct cgctggaact cggcatcgac
     3961 attggcgagg tcgacctggt gtgccaattg tcgtcgccgc gttccatcgc cgcgttcctg
     4021 cagcgcgccg gccgcgccgg ccatgccgtg gatggcatct cgaaagcacg cttgttcccg
     4081 acttcgcgcg atgacctcgc ggaatgcgtg gccctgctcg actgcgtgcg ccgcggcgag
     4141 ctggacacct tgcacattcc gcccacgccg ctggacgtgc tggcgcaaca caccgtcgcg
     4201 gaagtcgcgt gcggcgaacg cggcgaggcg gaactgttcg agctgttccg gcgcgcgtac
     4261 ccgtaccgcg agctcacgcg cgcaaccttc accagcgtcg tgcggatgct ggccgaaggt
     4321 tacagcacgc gccgcggaat ccgggccgcg tacctgcatc gcgatgccgt gcacggccgc
     4381 ctgcgcgcgc gtcgtggcgc gcggatgacc gcgctgacgt ccgccggcgc gattccggac
     4441 accgccgatt acgacgtggt gctggaaccg caagacctgc gcgtcggcag cgtcaacgag
     4501 gactttgcgg tcgagtcgat ggcgggcgac atcttccagc ttggcaatca gtcgtaccgc
     4561 atcatgcgca ttgaacgcgg ccgcgtccgc gtggaggacg cccacggcgc gccgccgtcg
     4621 atcccgttct ggctgggcga ggcacccggc cgcagcgacg agttgtcgtc cgcagtggcg
     4681 cggttgcgcg aggacatcgc gacgcgactt gaacccctct ccccccggga gaggggcagg
     4741 ggtgagggtt cgggtacgca ggataatcct tcccgcgagt ccgaaccctc atccggcgct
     4801 tcgcgccacc ttctcccgga gagagaaggg aaagcccgcg catggctggt taacgaagtc
     4861 ggcatcggtg aacacgccgc gcagcaactg gtcgattact acgccgccgc acgcatcgag
     4921 cttggcttgc ttccgacgca aaccacgctg gcgatggagc gtttctttga cgaggccggc
     4981 ggcatgcaac tggtgatcca ctcgccgctc ggcagccgcc tgaaccgcgc gtgggggctc
     5041 gcgctgcgca agcgcttttg ccgcagcttc aacttcgagc tgcaggcgtc ggccaccgaa
     5101 gatgcgatcg tgctgtcgct ttcaaccagc cacagcttcc cgctggcgga agtcgcgcgc
     5161 tacctgcatt ccaattcggt gcgcgacgta ctgacccagg cgttgctgga cgcaccgatg
     5221 ttcgcgctgc gctttcgctg gaacgccagc gcggcgctgg cgctgccacg cttcgccggc
     5281 ggccgcaagg tgcc
//
LOCUS       DASSVL010000575         2096 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_451114, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000575 DASSVL010000000
VERSION     DASSVL010000575.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2096)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2096)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2096
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_451114"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1020)
                     /locus_tag="VFM52_10025"
     CDS             complement(<1..1020)
                     /locus_tag="VFM52_10025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008211227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_process: GO:0008610 - lipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sterol desaturase family protein"
                     /protein_id="HET8765545.1"
                     /translation="MFSLPQLWSSLVDAFSAHAVAPMLDVLHLGKLSGDPRDIAAALL
                     IAALQIAIITCVFRPLETFFPAEKWTNRKLTLADRNYTLAMLLGIFPLFTYLILMPFS
                     NLFGGGSTDTDASGSVLALTHWVPWLDAHPYVLFGVYYVIYDFVYYWMHRTQHAIPWW
                     WALHSMHHSTRQMSCWTNDRGSLVDGFIQSMILATVGLAIGVDPDEFAWLMLIGELVQ
                     NLSHTNTRLGFGRVFNHLFVDPKFHRLHHMLIDPDRPQLHNCNFGQVFSIWDVIFGTA
                     LYGEAPRPTGVGDPVVDADNNCGVIGLQWVSFKRFWASVWRPAGWKLGEVAFDPVDLH
                     PVPVSE"
     gene            complement(1087..1965)
                     /locus_tag="VFM52_10030"
     CDS             complement(1087..1965)
                     /locus_tag="VFM52_10030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007513558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HET8765546.1"
                     /translation="MSPSPSRGALSALLVTILIWAYSWVVMKQVLAYIGPFNFSALRY
                     FLGALALFAALLVARQSLRPPPLGATILIGLFQTAAFQGFEQLALVNGGAGHVALLAY
                     TMPFWAVLLAWVILRDRPTRAHWIGVGFAALGLLFIIEPWRGLGNATSTLLAIVGGAT
                     WAAGTVLSKKLFRERSVSALSLTAWQMLAGGIALGIVALLVPQRPTVWNASLAAGLAY
                     CVLFASSLAWWLWSIVLARLPTTLASVGSLGVPIVSVLLAWWILAERPSPSEWIGIAL
                     VLAGLCAVSGVRLRRH"
BASE COUNT          404 a          701 c          719 g          272 t
ORIGIN      
        1 ctcgctgacc ggcaccgggt gcaggtcgac cgggtcgaac gccacctcgc cgagcttcca
       61 gccggccggg cgccacaccg acgcccagaa acgcttgaac gacacccact gcaggccgat
      121 cacgccgcag ttgttgtcgg cgtccaccac cgggtcgccg acgccggtcg ggcgcggcgc
      181 ctcaccgtac agcgcggtgc cgaagatcac gtcccagatc gagaacacct ggccgaagtt
      241 gcagttgtgc agctgcgggc ggtcggggtc gatcagcatg tggtgcaggc ggtggaactt
      301 cgggtcgacg aagaggtggt tgaacacgcg cccgaagccg agccgggtgt tggtgtgcga
      361 caggttctgc accagctcgc cgatcagcat cagccacgcg aactcgtccg ggtcgacgcc
      421 gatcgcgagg ccgaccgtgg ccaggatcat cgactggatg aagccatcca ccaggctgcc
      481 gcggtcgttc gtccagcagc tcatctgccg cgtgctgtgg tgcatgctgt gcagcgccca
      541 ccaccacggg atggcgtgct gggtgcggtg catccagtag tacacgaagt cgtagatcac
      601 gtagtacacg ccgaacagca cgtacgggtg cgcgtcgagc cacggcaccc agtgcgtgag
      661 cgccagcacc gaaccgctgg cgtcggtgtc cgtgctgccg ccgccgaaca ggttgctgaa
      721 cggcatcagg atcaggtagg tgaacagcgg aaagatgccg agcagcatcg ccagcgtgta
      781 gttgcggtcg gcaagcgtta gcttgcggtt agtccacttt tccgccggga agaaggtttc
      841 cagcgggcgg aacacgcagg tgatgatggc gatctgcagc gccgcgatca gcagcgcggc
      901 ggcgatgtcg cgtgggtcgc cggaaagttt gcccaggtgc agcacgtcca gcatcggcgc
      961 cacggcgtgt gcgctgaagg catccaccag cgaagaccac aattgcggca gcgaaaacat
     1021 ggccaaccag cagtgaagaa caacggggaa tggtaacgct gcgcccgtcg cgtgacgctg
     1081 aatgcgtcag tgtcgccgca ggcgcacgcc gctcaccgcg cacaggccgg cgaggaccag
     1141 cgcgataccg atccactccg atggcgacgg gcgttccgca aggatccacc acgccagcag
     1201 cacgctgacg atcggcacgc cgaggctgcc gacgctggcc agcgtggtcg gcagccgcgc
     1261 cagcacgatc gaccacagcc accacgcgag gctcgacgcg aacagcacgc aataggcgag
     1321 gccggcggcc agcgacgcgt tccacaccgt cggccgttgc ggcaccagca gggcgacgat
     1381 gccgagcgcg ataccgcccg ccagcatctg ccaggcggtg aggctgagcg ccgagacgct
     1441 gcgctcgcgg aacaatttct tgctgagcac ggtaccggcc gcccaggtcg cgccgccgac
     1501 gatcgccagc agcgtgctgg tcgcgttgcc cagcccgcgc cacggctcga tgatgaacag
     1561 cagtccgagc gcggcgaaac cgacgccgat ccagtgcgcg cgcgtcggcc ggtcgcgcag
     1621 gatcacccac gccagcagca ccgcccagaa cggcatcgtg tacgccagca gcgccacgtg
     1681 gccggcgccg ccgttgacca gcgccagctg ctcgaagccc tggaacgcgg cggtctggaa
     1741 caggccgatc aggatcgtcg cgccaagcgg cggcgggcgc agcgactggc gcgcgacgag
     1801 caacgcggcg aacaacgcca gcgcgccgag gaaatagcgc agcgcggaga aattgaacgg
     1861 gccgatgtac gccagcacct gtttcatcac cacccagctg taggcccaga tcaggatggt
     1921 gacgagcagc gcggacagcg cgccgcggga tggcgaaggt gacatggggg ccggaccggg
     1981 gaaaggcgac aagtctagcg gcgtgggtta gcttgtggcg cattcttcga ccatccgcca
     2041 gccatgacca agagctccga accgccacgt tgcgcctggg ccgccaacgg cgacac
//
LOCUS       DASSVL010000576         2898 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_535570, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000576 DASSVL010000000
VERSION     DASSVL010000576.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2898)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2898)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2898
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_535570"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..403
                     /locus_tag="VFM52_10035"
     CDS             <1..403
                     /locus_tag="VFM52_10035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002813906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glycoside hydrolase family 125 protein"
                     /protein_id="HET8765547.1"
                     /translation="ANVPSLLALPYLGFCARDDARYQRTRARAWGTRNPYFFRGTAAE
                     GIGGPHEGLRMIWPMSLMVRALTSADAGEIRQCLHWLKTTHAGTGFMHEAFDQDDPAH
                     YTRPWFAWANSLFGELIVSLAERHPELLRRA"
     gene            441..2885
                     /locus_tag="VFM52_10040"
     CDS             441..2885
                     /locus_tag="VFM52_10040"
                     /EC_number="3.2.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019465405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030246 - carbohydrate binding [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GH92 family glycosyl hydrolase"
                     /protein_id="HET8765548.1"
                     /translation="MVTRRQFLQGAAALTLLGGLDPRGTLAAPRGQGSAAALTGMAKN
                     GVSRFVDVFVGTGGHGHTFPGASMPWGMVQLSPDTNDFGWDACSGYHQADGSIMGFSH
                     THLSGTGASDMLDVLVMPAQGEVLLDPGDRGLPPYNYYSKFDGAAHGPHLTPDMVAHP
                     GKGYRSRYDKASEQGVPGYYRVRLTDHDILAELTATLRTGLHRYTFARGGKAHLVVDL
                     AHGYHDDPKVPCKVSDATLKLVGNDTLVGGRRVHQWANGRHIYFAMKLSRPFAAATLY
                     SENQPLPSGTGEARGTHLKAALHLDDAAKAPLLVKVGISSVDVAGALRNLESELPGWD
                     FERVRQAAADSWETELARIHIDTPSAPARRTFYSALYHTMLAPTLFDDVDGRYRGMDL
                     AVHQLPQGEHNYSTYSLWDTYRALHPLYTLVQPDKVPGMVNGLVRMAAESPEGPPVWP
                     LQGVETGTMIGYHSAVVIAEALAKGFTGVDYAKAWPIFRKRAFDDDYRGLPWYRKLGY
                     IPSDKEGEAVSKTLEYAYDDWALADMAERLGAQDDAKKLRERSRNYRHVFDEKLTFMR
                     PRGSDGKWLEPFDPREMGHFEKWRDFTESNPWEATFLNQHDLYGYMPMFGGVAAFERK
                     LDELFTTSSALPADAPPDIAGMIGQYAHGNEPSHHVAYLYAYTGSHWKTQSRVRMLLE
                     TMYPPAPDGLAGNEDCGQMSAWYVLSALGLYAVDPVSTHYVFGSPLLDHAEVALGAGK
                     KLVVEAHGNGPGKPYIQSVTWNGKPWTKSWIDHKDLAAGGTLVFAMGATPNKQFGAAP
                     ADRPPSFGRMAGKQEA"
BASE COUNT          485 a         1034 c          978 g          401 t
ORIGIN      
        1 cgccaacgtg cccagcctgc tggcgctgcc gtacctcggc ttctgcgcgc gggacgacgc
       61 gcgctaccag cgcacccgcg cacgcgcctg gggcacgcgc aacccgtatt tcttccgcgg
      121 cacggcggcg gaaggcatcg gcgggccgca cgagggcctg cgcatgatct ggccgatgtc
      181 gctgatggtg cgcgcgctga ccagcgccga cgccggcgag atccgccagt gcctgcactg
      241 gctcaagacc acccacgccg gcaccggctt catgcacgag gcgttcgacc aggacgatcc
      301 cgcccactac acacggccct ggttcgcctg ggccaacagc ctgttcggcg agctgatcgt
      361 cagcctggcc gaacgccacc ccgaactgct gcggcgtgcc tgagcgccgt tcctccgacc
      421 tgaccacagg agcccacgac atggtgaccc gcagacaatt cctgcaaggc gcggcagcgc
      481 tgacgttgct tggcggcctc gacccgcgtg gcacgctcgc cgcgccgcgc gggcaaggca
      541 gtgccgcggc gctgaccggc atggcgaaga acggcgtatc gcggttcgtc gacgtgttcg
      601 tcggcaccgg cggccacggc cataccttcc ccggcgcgtc gatgccgtgg ggcatggtgc
      661 agctctcgcc cgacaccaac gacttcggct gggacgcctg ctcgggctac caccaggccg
      721 acggttcgat catgggcttt tcgcacaccc acctttccgg caccggcgcc agcgacatgc
      781 tcgacgtgct ggtgatgccg gcgcagggcg aggtgctgct cgacccgggc gatcgcggcc
      841 tgccgccgta caactactac tccaagttcg acggcgcggc acacgggccg cacctcacgc
      901 cggacatggt ggcgcatccg ggcaagggct accgctcgcg ctacgacaag gcctccgagc
      961 agggcgtgcc cggctactac cgcgtacgcc tcaccgacca cgatatcctc gccgagctga
     1021 ccgccacgct gcgcaccggc ctgcaccgct acacctttgc caggggcggc aaggcgcacc
     1081 tggtcgtcga tctcgcgcac ggctaccacg acgaccccaa ggtgccgtgc aaggtgtcgg
     1141 acgccacgct gaaactggtg ggcaacgaca ccctggtcgg cggccgccgc gtgcaccagt
     1201 gggcgaacgg gcggcacatc tacttcgcga tgaagctgtc gcggccattc gcggccgcca
     1261 cgctgtacag cgagaaccag ccgctgccga gcggcaccgg cgaggccagg ggcacgcacc
     1321 tcaaggccgc gctgcacctg gacgacgcgg cgaaggcgcc gctgctggtc aaggtgggca
     1381 tctccagcgt cgatgtcgcc ggcgcgctgc gcaacctgga atcggaactg cccggctggg
     1441 atttcgagcg tgtacgccag gccgcggcgg acagctggga aaccgagctg gcgcgcatcc
     1501 atatcgacac gccgtcggcg ccggcgcggc gcacgttcta cagcgcgctg taccacacca
     1561 tgctcgcgcc cacgctgttc gacgacgtgg acggccgcta tcgcggcatg gatctggccg
     1621 tgcaccagct gccgcagggc gagcacaact acagcaccta ttcgctgtgg gacacctacc
     1681 gcgcgctgca cccgctgtac accctggtgc agccggacaa ggtgccgggc atggtgaacg
     1741 gcctggtgcg catggcggcg gaaagtcccg agggcccgcc ggtatggccg ctgcagggcg
     1801 tggagaccgg caccatgatc ggctaccact ccgcggtggt gatcgccgag gcgctggcca
     1861 agggcttcac cggcgtcgac tacgcgaagg cgtggccgat cttccgcaag cgcgccttcg
     1921 acgacgacta ccgtggcctg ccgtggtacc gcaagctcgg ctacatcccc agcgacaagg
     1981 agggcgaggc ggtcagcaag acgctggaat acgcctacga cgactgggcg ctggcggaca
     2041 tggccgagcg cctcggcgcg caggacgacg cgaagaagct gcgcgagcgc tcgcgcaact
     2101 accgccacgt gttcgacgag aagctcacct tcatgcgccc gcgcggcagc gacggcaagt
     2161 ggctggagcc gttcgatccg cgcgagatgg ggcacttcga gaagtggcgc gacttcaccg
     2221 agtcgaaccc gtgggaggcc accttcctca accagcacga cctgtatggc tacatgccga
     2281 tgttcggcgg tgtggccgcg ttcgagcgca agctggacga actgttcacc accagctccg
     2341 cgctgcccgc cgacgcgccg ccggacatcg ccggcatgat cggccagtac gcgcacggca
     2401 acgagcccag ccaccacgtg gcctacctct acgcctacac cggttcgcac tggaagaccc
     2461 agtcgcgcgt gcgcatgctg ctggaaacca tgtatccgcc ggcgccggac ggcctcgccg
     2521 gcaacgagga ctgcggccag atgagcgcgt ggtacgtgct gagcgcgctg ggcctgtacg
     2581 cggtcgatcc ggtgagcacg cactacgtgt tcggcagccc gctgctggat cacgccgagg
     2641 tggcactggg cgcgggcaag aagttggtcg tggaagcgca cggcaacggc ccgggcaagc
     2701 cctatatcca gtccgtcacc tggaacggca agccgtggac gaagagctgg atcgaccaca
     2761 aggatctcgc cgccggcggc accctggtgt ttgcgatggg cgccacgccg aacaagcagt
     2821 tcggcgcggc gccggcggat cgcccgcctt cgttcggccg gatggccggc aagcaggagg
     2881 cctgaatgat ggcgccga
//
LOCUS       DASSVL010000577         2315 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_860866, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000577 DASSVL010000000
VERSION     DASSVL010000577.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2315)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2315)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2315
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_860866"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(88..639)
                     /locus_tag="VFM52_10045"
     CDS             complement(88..639)
                     /locus_tag="VFM52_10045"
                     /inference="COORDINATES: protein motif:HMM:NF019081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfaZ family outer membrane protein"
                     /protein_id="HET8765549.1"
                     /translation="MIGKITFSLGLLAALLAGGADATSVAASGGDGSFGIHADTALAP
                     MLTADVDFLHAGSVRGDAKAYSAGLMLAPPTPVVHWGVGARYRYQDTRLGSGGGVELG
                     ASVFVATPVPRVSVGGVAWYLPSALANGDVRRSYDYSAQVRLAVTRATYLWAGYRRMQ
                     VTFEDGRAQALYKGPTFGVSVGF"
     gene            1011..2126
                     /locus_tag="VFM52_10050"
     CDS             1011..2126
                     /locus_tag="VFM52_10050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015448114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing phosphohydrolase"
                     /protein_id="HET8765550.1"
                     /translation="MTPRDFDPNDLAVGQVLPRDAYNGRGQLLLRHGTVIRTAAQRDL
                     IAENALATTAPAAERAEQETTIPATPLGMILAARWRLMALFEQGSGFFASDLQRIAAL
                     VRRASRANADLALAAVVLVRDAPYVVRHAVNAATLCQVVGSALEWDEARLAATTAAAL
                     TMNIGMLEVQQQLHKSSAPPSAEQLEVIRRHCTHGVELLRELGVDDPAWLDIVRDHHE
                     RADGSGYPAGRRGEEIGQPARLLALADLYCARISARAYRQAMSPTPALRQLFVDEGGH
                     VDETLVAQFIKTLGVHPPGTGVRLRNGSIAVVTQRGNAKHGPRLAALTATNGLRLPAP
                     LRHNGDSPAHAIVATVDLEALKLAVNMAALWGADATL"
BASE COUNT          361 a          847 c          809 g          298 t
ORIGIN      
        1 gggattcaag attctgcatg gcaaatggat gtccgaatca ggcggaaggc tccggcattg
       61 tgccggcgca gggcacgcgg taccagctca gaagccgacg ctcacaccga aggtcggccc
      121 cttgtacaac gcctgtgcgc ggccgtcctc gaaggtcacc tgcatgcgcc ggtagccggc
      181 ccacaggtag gtggcgcggg tgaccgcgag ccgtacctgc gcgctgtagt cgtagctgcg
      241 gcgcacgtcg ccgttggcca gcgccgacgg caggtaccag gcaaccccgc caaccgacac
      301 ccgcggcacc ggcgtggcga cgaataccga cgcccccagt tcgacgccgc caccgctgcc
      361 cagccgggtg tcctggtagc gatagcgcgc gccgacgccc cagtgcacga ccggcgtcgg
      421 cggtgccagc atcagcccgg cactgtatgc cttggcgtcg ccccggacac tgccggcatg
      481 caggaaatcg acgtcggcgg tgagcatcgg cgccagcgcg gtatcggcgt ggatgccgaa
      541 cgagccgtcg ccgccgctgg cggcaacact ggtggcatcg gcgccgccgg cgagcagggc
      601 cgcgagcagg ccgagcgaaa acgtgatctt gccgatcatt cggatgcctc gttcagggga
      661 tggcggcggc cggcgcggta cgcggcaacg gcggggatgc cgatcgcccg gaattaaacc
      721 agaccgccag ccgtgcgcaa aatcagccgc gcggtgccgt ggcatccagt cgggcggaaa
      781 cccaccccgc gagccccacc gcaacgggac ggaccagtcg gccgcggcgc ggggttcaac
      841 ttttgccggg ggttgccgat gactgttcga ggccatgcgc acgccgcgct ggccagcccc
      901 tggatgatgg tgcgatcgac tcgcgaggcg tccgcgagag gaggtgtccc gatgcagcca
      961 cgaccgcccg cttgcgcccc ggcagccgtc cccatcccgt cgtgccggcc atgacgccgc
     1021 gcgacttcga ccccaatgac ctcgcggttg gccaggtgct gccgcgcgac gcctacaacg
     1081 gccgcggcca gctgctgctg cgccacggca ccgtcatccg caccgcggcc caacgcgacc
     1141 tgatcgccga gaacgcgctg gccaccacgg caccggcggc ggagcgcgcg gaacaggaaa
     1201 ccacgatccc ggccaccccg ctgggcatga tcctggccgc gcgctggcgg ctgatggcgc
     1261 tgttcgaaca gggttccggc ttctttgcct cggacctgca gcgcatcgcg gcgctggtgc
     1321 ggcgggccag ccgcgccaac gccgaccttg cgctggcggc ggtcgtgctg gtgcgcgacg
     1381 cgccctacgt ggtccgccac gcggtcaacg cggcgaccct gtgccaggtg gtcggcagcg
     1441 cccttgaatg ggatgaagcg cggcttgccg cgaccacggc tgccgcgctg acgatgaaca
     1501 tcggcatgct cgaagtgcag cagcaactgc acaagtcgtc tgcaccgccg agtgccgaac
     1561 aactggaggt catccgccgg cactgcacgc acggcgtgga gctgctgcgc gagctgggcg
     1621 tcgacgaccc ggcgtggctc gacatcgtgc gtgaccacca cgagcgtgcc gacggcagcg
     1681 gctatccagc cggccggcgc ggcgaggaga tcggccagcc ggcgcgcctg ctcgcgcttg
     1741 ccgacctcta ctgcgcacgc atctcggcgc gcgcctaccg ccaggcgatg agcccgactc
     1801 cggccctgcg ccagctgttc gtcgacgagg gcggccacgt cgacgaaacc ctggtggcgc
     1861 agttcatcaa gacgctcggc gtccacccgc ccggtaccgg cgtgcgcctg cgcaacggca
     1921 gcatcgcggt ggtgacccag cgcggcaacg caaagcatgg cccgcggctg gcggcgctga
     1981 ccgccacgaa cggcctgcgc ctgccggcgc cgctgcgcca caacggcgac tcgccggcgc
     2041 acgcgatcgt cgccacggtc gatctcgaag cgttgaagct cgcggtcaac atggccgcgc
     2101 tgtggggcgc cgacgcaacc ctgtgatgca accgggcgtc gactgaagcc atccgcagcc
     2161 cgtggggcgg gattcatccc ggccggactt cgtgtaccac cggaggtccc ggctgcagcc
     2221 cgacccacca aaacaccggg cctccgggga gcggggccgg ttcgaccggg ctgcgcgcat
     2281 gccgccgccg ggttcaacca tgcggcgcgc cgagg
//
LOCUS       DASSVL010000578         2162 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_479370, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000578 DASSVL010000000
VERSION     DASSVL010000578.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2162)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2162)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2162
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_479370"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            30..572
                     /locus_tag="VFM52_10055"
     CDS             30..572
                     /locus_tag="VFM52_10055"
                     /inference="COORDINATES: protein motif:HMM:NF022664.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3011 domain-containing protein"
                     /protein_id="HET8765551.1"
                     /translation="MAVAALVSVLVSACVPPDARAQRYGDRGQQQAYCASNDNRGTRC
                     RMPWRDSALVQQMSSAACIEGQTWGSDPYTVWVKDGCRGNFGEARGWWRGGYDGYRND
                     RDDRDDGDDRGGAEVYCASNDNRGARCQMPWRRATLSRQMSNAACIEGETWGSDPYSV
                     WVKDGCRGQFRAAWGGRGGW"
     gene            680..>2162
                     /gene="aspS"
                     /locus_tag="VFM52_10060"
     CDS             680..>2162
                     /gene="aspS"
                     /locus_tag="VFM52_10060"
                     /EC_number="6.1.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015446894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016874 - ligase activity [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate--tRNA ligase"
                     /protein_id="HET8765552.1"
                     /translation="MRTHYCGLIDESLVGQTVTLCGWVNKIRLQSHVAFVDLRDHEGL
                     AQVVVEKDNAAAFATAGELGYEYCVRVTGTLRKRLAVNDKLKTGTVEVLADRVEILNA
                     AKDLPFALHESPNEDLRMTYRYLDLRRPEMQAMIRKRIKLVQALRRYLDAHGFQDVET
                     PILTKATPEGARDYLVPSRVHPGQFYALPQSPQLFKQLLMIAGFDRYYQIARCFRDED
                     LRADRQPEFTQLDLEFAFVDEHDIQGFTENLIRHVFKEVADVALAEPFPRMTWAEAMR
                     RFGSDKPDLRIALELVDIAEAVKHVEFKVFAEPANAADGRVAALRVPGGAAYSRKDIE
                     HLTEHVAKFGAKGLAWIKVDDPAKGREGVNSPIAKFLDDAALAAVLKLTGAKAGDIVF
                     IGAGKWKPITDSMGALRLKVAKDRGLVEAGWKPLWVTDFPMFEYDEAEQRYVALHHPF
                     TAPKIDDIANLKDHAATAVSRGYDIVLNGNEIGGGSIRIHHPDM"
BASE COUNT          365 a          716 c          747 g          334 t
ORIGIN      
        1 gcaggttccg tatgcatcgt gtgtccgtca tggcggttgc tgcgctcgtt tcggtgctgg
       61 tctccgcatg cgtccccccc gacgcacgcg cccagcggta tggcgaccgc ggccagcagc
      121 aggcctattg cgcgagcaac gacaatcgcg gcacacggtg ccggatgccg tggcgcgatt
      181 cggcgctcgt gcagcagatg tccagcgcgg cctgcatcga aggccagact tggggcagcg
      241 acccgtacac cgtgtgggtc aaggacggtt gccgcggcaa cttcggcgaa gcgcgtggat
      301 ggtggcgcgg cggctacgac ggctaccgga atgaccgcga cgaccgcgac gacggcgacg
      361 accgcggtgg cgccgaggtc tactgcgcca gcaacgacaa tcgcggtgcg cgctgccaga
      421 tgccgtggcg tcgcgccacg ctgtcgcggc agatgtcgaa cgccgcctgc atcgagggcg
      481 agacctgggg cagcgacccg tacagcgtgt gggtgaaaga cggttgccgt gggcagttcc
      541 gcgcggcgtg gggcgggcgc gggggttggt agtggcgcgc gtcgccaggc ggcgcgtgcg
      601 tcggcagccc acggccggat gctagaattt cgagcctttc cccctgtttt catgggctgc
      661 ggcccggagt tccaagcgca tgcgcacgca ttactgcggc ctcatcgatg agtcgctggt
      721 cggccagacc gtcaccctgt gcggctgggt caacaagatc cgcctgcagt cccacgtcgc
      781 cttcgtcgac ctgcgtgacc acgagggcct ggcgcaggtc gtggtggaaa aggacaacgc
      841 cgccgcgttc gcgacggccg gggaacttgg ctacgaatac tgcgtgcgcg tcaccggcac
      901 gctgcgcaag cgccttgcgg tcaacgacaa gctgaagacc ggcacggtcg aggtgctggc
      961 ggaccgggtc gagatcctca acgccgcgaa ggacctgccg ttcgcgctgc acgagagccc
     1021 gaacgaagac ctgcgcatga cctatcgcta tctcgacctg cgccggcccg agatgcaggc
     1081 gatgatccgc aagcgcatca agctggtgca ggcgctgcgc cggtacctcg acgcgcacgg
     1141 cttccaggac gtggaaaccc cgatcctgac caaggccacg ccggaaggcg cacgcgatta
     1201 cctggtgccc agccgcgtgc atcccggcca gttctacgcg ttgccgcagt ccccgcagct
     1261 gttcaagcag ctgttgatga tcgccggctt cgaccgctac taccagatcg cgcgctgctt
     1321 ccgcgacgag gatctgcgcg ccgaccgcca gccggaattc acccagctcg atctcgaatt
     1381 cgccttcgtc gacgagcacg acatccaggg cttcaccgag aacctgatcc gccacgtgtt
     1441 caaggaagtg gcggacgtgg cgctggccga gccgttcccg cgcatgacct gggcggaggc
     1501 gatgcgccga ttcggctcgg acaagcccga cctgcgcatt gcgctggagc tcgtggacat
     1561 cgccgaggcg gtgaagcacg tcgagttcaa ggtgttcgcc gagccggcga atgccgccga
     1621 cggccgggtt gccgcgctgc gcgtgccggg cggcgccgcg tattcgcgca aggacatcga
     1681 gcatttgacc gagcacgtcg cgaagttcgg tgcgaagggc ctggcgtgga tcaaggtcga
     1741 cgacccggcg aaggggcgcg agggcgtcaa ttcaccgatc gcgaagttcc tcgatgacgc
     1801 cgcgctggcc gcggtgctca agctcaccgg ggcgaaggcc ggcgacatcg tgttcatcgg
     1861 cgccggcaag tggaagccga tcaccgattc gatgggcgcg ctgcggctca aggtggcgaa
     1921 ggatcgcggc ctggtcgaag ccggctggaa gccgctgtgg gtcaccgatt tcccgatgtt
     1981 cgagtacgac gaggccgagc agcgttacgt ggcgttgcac cacccgttca ccgcgccgaa
     2041 gatcgacgac atcgccaacc tcaaggacca cgccgccacc gcggtcagcc gcggctacga
     2101 cattgtgctc aacggcaacg agatcggcgg cggctccatc cgcatccacc acccggacat
     2161 gc
//
LOCUS       DASSVL010000579         2065 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1114823,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000579 DASSVL010000000
VERSION     DASSVL010000579.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2065)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2065)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2065
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1114823"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            3..1166
                     /locus_tag="VFM52_10065"
     CDS             3..1166
                     /locus_tag="VFM52_10065"
                     /EC_number="2.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008217429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA C-acetyltransferase"
                     /protein_id="HET8765553.1"
                     /translation="MVERFGLHGEELGEVALGAVIKHPSDWNLAREAVLSSGLAPTTP
                     GITTARACGTSLDNTIIVAGKIALGQIEAGIAAGSDTTSDVPIVYGTRLRKRLLAINR
                     AKTLIEKLKIAVHRFSLKELKPGFPGVAEPRTGMSMGDHCERMAREWKVTRAEQDALA
                     LESHRKLAAAYDAGFFDDLLVPFRGLKRDGFLRPDSTLEKLAKLKPAFDKTSGHGTLT
                     AGNSTGLSDGAAAVLLASEAWAARHQLKVQAWLRDAEVAAVDFVHGEGLLMAPTIAVP
                     RMLKRNGLTLQDFDYYEIHEAFAAQVLCTLRAWESADYCRNRLGLDAPLGAIDPAKLN
                     IHGSSLAVGHPFAATGARLVATLAKLLEQKGSGRGLISICTAGGMGVTAILER"
     gene            1215..1790
                     /locus_tag="VFM52_10070"
     CDS             1215..1790
                     /locus_tag="VFM52_10070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007810545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HET8765554.1"
                     /translation="MFRLRTTTSLSLLALAVGIAGTQWLSGQGVGWAGPSERVAGFVH
                     AVPPAVRTTHGVRQGHAARHVAGSPRAVAVVVPVRHRAPLAVAEAAAAEPAPPPELVP
                     VAMPSDPVSWSRMRDHLAGNVLLQLAVDGAGNVTAASLAQSSGDPVLDAHALATVRHW
                     RFAVPADHPDGLSGELTMRFAPAAGPLVQAP"
BASE COUNT          286 a          757 c          724 g          298 t
ORIGIN      
        1 cgctggtcga gcgcttcggc ctgcatggcg aggagctggg cgaagtggcg ctcggcgccg
       61 tcatcaagca tccgtcggac tggaacctcg cgcgcgaggc cgtgctttcc tccgggctgg
      121 cgccgaccac gccgggcatc accaccgcgc gcgcctgcgg cacctcgctg gacaacacca
      181 tcatcgtcgc cggcaagatc gcgctgggcc agatcgaggc cggcatcgcc gcgggcagcg
      241 acaccaccag cgacgtgccg atcgtgtacg gcacccgcct gcgcaagcgc ctgctcgcca
      301 tcaaccgcgc gaagacgctg atcgagaaac tgaagatcgc ggtgcaccgg ttttccctga
      361 aggagctcaa gccgggtttt cccggcgtcg ccgagccacg caccggcatg tcgatgggcg
      421 atcactgcga gcgcatggcg cgcgagtgga aggtgacccg cgccgagcag gatgcgctcg
      481 cgctggagag ccaccgcaag ctcgccgccg cgtatgacgc cggcttcttc gacgacctgc
      541 tggtgccgtt ccgcgggctg aagcgcgatg gcttcctgcg tccggactcg acgctggaga
      601 agctcgccaa gctgaagccg gcgttcgaca agacctccgg ccacggcacg ctcaccgccg
      661 gcaactccac cgggctgtcc gatggcgccg cggccgtgct gctggcaagc gaggcgtggg
      721 cggcgcggca ccagctcaag gtgcaggcgt ggctgcgcga cgccgaggtg gccgcggtgg
      781 atttcgtgca tggcgagggc ctgttgatgg cgccgaccat cgccgtgccg cgcatgctga
      841 aacgcaacgg cctgaccctg caggacttcg actattacga gatccacgag gcgtttgccg
      901 cgcaggtgct gtgcacgctg cgcgcgtggg aaagcgcgga ttactgcagg aaccgtctcg
      961 gcctcgacgc gccgctcggc gcgatcgacc cggccaagct caacatccac ggctccagcc
     1021 tcgccgtcgg ccacccgttc gcggcgaccg gcgcgcgcct cgtcgcgacg ctggcgaagc
     1081 tgctcgaaca gaagggctcc ggccgcggcc tgatctcgat ctgcaccgcc ggcggcatgg
     1141 gcgtcaccgc catcctcgaa cgctgacgcc gccgcttcag gcgcgattcc cgcgtcgtgg
     1201 cgcatagata cgcgatgttt cgcctgcgca ccaccacttc cctgagcctg ctcgccctgg
     1261 ctgtcggcat tgccggcacc cagtggctga gcgggcaagg cgtcggctgg gccgggccga
     1321 gcgagcgcgt ggccggcttc gtgcacgccg tgccgcccgc ggtgcgcacg acgcacggcg
     1381 tgcgccaggg acacgcggcg cggcatgtgg ccggatcgcc gcgcgctgtg gccgtcgtgg
     1441 tgccggttcg ccaccgggcg ccgctggccg tcgccgaggc ggcggcggcc gaacccgcac
     1501 cgccgcccga gctggtgccg gtggccatgc cgtccgaccc ggtgtcgtgg tcgcggatgc
     1561 gcgaccacct ggcgggcaac gtgctgttgc agctggcggt cgacggcgcc ggcaacgtca
     1621 ccgccgccag cctcgcgcaa tccagcggcg atccggtgct cgacgcccac gcgctcgcca
     1681 ccgtccgcca ttggcgtttc gccgtgccgg cggatcatcc ggacggcctc agcggcgagt
     1741 tgacgatgcg cttcgcgccg gccgccgggc cgctcgtgca ggcgccatag ccccggtttg
     1801 tcgcgggcgg cccggcccgc cgggcacgac taaagtcggc ctccgcccgc cttcgcgcgg
     1861 cgcatgcacg ctgctaggct ccaatacgtc tgcaccctca ccgcattgcg ccggttcacc
     1921 ggcgggctgc gcgtccccca ggggtacgtt cgtgttcacg catcggacta aacagaggag
     1981 atcagccatg aagaactcgt cccggcgcag gcggctcctg cgcggcggcg tcatcgcgct
     2041 ggcggtggcg ctggcaacat cggcg
//
LOCUS       DASSVL010000580         3059 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1072151,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000580 DASSVL010000000
VERSION     DASSVL010000580.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3059)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3059)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3059
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1072151"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1604)
                     /gene="rpoD"
                     /locus_tag="VFM52_10075"
     CDS             complement(<1..1604)
                     /gene="rpoD"
                     /locus_tag="VFM52_10075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007082318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoD"
                     /protein_id="HET8765555.1"
                     /translation="MNNKIHEQQSEIKALISKGLEQGYLTYAEINDHLPDDIVDAEQI
                     EDIMAVLKGVGIEVHDAAPDADPLADNAPSATSDDEAAEEAVALLSAVDSEVGRTSDP
                     VRMYMREMGTVELLTREGEIAIAKRIEEGLSQVQNALASFPLTIELLLGEYDQHLDGK
                     RRLSEILAGFLDLEAAADAAREEREAAAAKAAEEREAAGEDAEGDEDAEDDEEATSEE
                     EEAVSNGPDPEEVKRRMELLREHYAKFQKAAPKAASITDRKIVKLRDQMAEEFLKLKL
                     PSALIDSFVRKLREVVGDIRHHERVLMDIFVKQVKMPKAEFLKAFPSNEGNLEWAAEL
                     SRKRQKWSPNVKTYRESIDAEQDKLAAIEKKLFLPLTDIKEINRAMSIGEAKARRAKK
                     EMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWI
                     RQAITRSIADQARTIRIPVHMIETINKLNRISRQMLQLYGREPTPEELAVAMEMPEDK
                     IRKVLKIAKEPISMETPIGDDEDSHLG"
     gene            complement(1749..2189)
                     /gene="dtd"
                     /locus_tag="VFM52_10080"
     CDS             complement(1749..2189)
                     /gene="dtd"
                     /locus_tag="VFM52_10080"
                     /EC_number="3.1.1.96"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007808637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004045 - aminoacyl-tRNA hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-aminoacyl-tRNA deacylase"
                     /protein_id="HET8765556.1"
                     /translation="MIALIQRVLSARVEVEGEIVGQIGAGLLALVAVQPDDGEAQARR
                     LCERLLGYRVFADAAGKMNRSLTEIGGGLLLVSQFTLAADTRKGMRPSFTTAAPPEAA
                     RHWFERLLELARAAHPAVETGRFGAHMVVSLVNDGPVTFRLDTG"
     gene            2269..>3059
                     /locus_tag="VFM52_10085"
     CDS             2269..>3059
                     /locus_tag="VFM52_10085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015446523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid A biosynthesis acyltransferase"
                     /protein_id="HET8765557.1"
                     /translation="MRADMWLLYLLLRLFALLPLRALQAIGAGCGRLALACRVASAHH
                     VAVNLAIARPQLDQAARDQLQRAAMAEDGKTLAEVVKIWGSDPRAALKLVREVRGEAL
                     FDASLKAGKGVIIAAPHLGCWELLNYWLCAKTPMAILYRPPRIAAVEGLLRKVRGALA
                     PEQVRAEGAGVRTLYRRLAAGGTVGILPDQKPRAGEGQFAPFFGLDANTMVLLPRIAQ
                     RTGATVLFAFAERLPRGAGFRIRILPAPDGIADADLRVACTALNRG"
BASE COUNT          425 a         1041 c         1020 g          573 t
ORIGIN      
        1 ccgagatggg aatcctcgtc gtcgccgatc ggggtttcca tcgagatcgg ttccttggcg
       61 atcttcagca ccttgcggat cttgtcctcg ggcatttcca tcgccacggc cagttcttcc
      121 ggcgtcggct cgcggccgta caactgcagc atctggcggc tgatgcggtt cagcttgttg
      181 atggtctcga tcatgtgcac cgggatgcgg atggtgcgcg cctggtcggc gatcgagcgg
      241 gtgatggcct ggcggatcca ccaggtggcg taggtcgaga acttgtagcc gcggcggtat
      301 tcgaacttgt ccacggcctt catcaggccg atgttgccct cctggatcag gtccaggaac
      361 tgcaggccgc ggttggtgta cttcttggcg atggagatca ccaggcgcag gttggcctcg
      421 accatctcct tcttggcgcg acgggccttg gcctcgccga tcgacatggc gcggttgatt
      481 tccttgatgt cggtcagcgg caggaacagc ttcttctcga tcgcggcgag cttgtcctgc
      541 tcggcatcga tcgactcgcg atacgtcttg acgttcggcg accacttctg gcgcttgcgc
      601 gacagctcgg cggcccactc gaggttgccc tcgttgctcg ggaacgcctt gaggaactcg
      661 gccttgggca tcttcacctg cttgacgaag atgtccatca gcacgcgctc gtggtggcgg
      721 atgtcgccca ccacctcgcg cagcttgcgc acgaagctgt cgatcagcgc ggacggcagc
      781 ttgagcttga ggaattcctc ggccatctgg tcgcgcagct tgacgatctt cctgtcggtg
      841 atgctggcgg ctttcggcgc ggccttctgg aacttggcgt agtgctcgcg cagcagttcc
      901 atgcggcgct tgacctcttc cgggtcgggg ccgttggaca ccgcctcctc ctcctcggac
      961 gtggcctcct cgtcgtcctc ggcatcctcg tcgccctcgg catcctcgcc ggcagcctcg
     1021 cgctcctccg cggccttcgc ggcagcggcc tcgcgctcct cgcgcgcggc atcggcggcg
     1081 gcctcgagat cgaggaagcc ggcgaggatc tcggacaggc ggcgcttgcc gtccaggtgc
     1141 tggtcgtact cgccgagcag cagctcgatg gtgagcggga agctcgccag cgcgttctgc
     1201 acctgcgaaa ggccttcctc gatgcgcttg gcgatggcga tctcgccctc gcgggtcagc
     1261 agttccaccg tgcccatctc gcgcatgtac atgcgcaccg ggtcggaggt gcggcccacc
     1321 tcggagtcga cggcggagag cagcgcgacg gcttcctcgg cggcctcgtc gtcgctggtc
     1381 gcgctgggcg cgttgtcggc gagcgggtcg gcgtcgggag cggcatcgtg cacctcgatg
     1441 cccacgccct tgagcaccgc catgatgtct tcgatctgct ccgcgtcgac gatgtcgtcg
     1501 ggcaggtggt cgttgatttc cgcgtaagtc agataaccct gttcgagccc cttggagatg
     1561 agcgccttga tctcggattg ttgctcgtgg attttgttgt tcattcaccg accgccgcag
     1621 ggttcaagaa ccggacatta tagcgatgtg acgctttttt gcccagtttt caagatggaa
     1681 agtcgcgcgg ccaagctagc aaaaaccgcg ccatatcacg cacttgcaca cgcccgatac
     1741 accggcgttc aaccggtatc cagccggaac gtgaccggtc cgtcgttcac caggctgacc
     1801 accatatggg cgccgaagcg cccggtttcc actgccggat gcgcggcccg cgccagctcc
     1861 agcaggcgtt cgaaccagtg ccgcgcggcc tccggcgggg ccgccgtggt gaagctcggg
     1921 cgcatgcctt tacgggtatc ggccgcgagg gtgaattggc ttaccagcag caggccgccg
     1981 ccgatttcgg tcaagctgcg gttcattttt ccggccgcgt cggcaaacac gcgataaccc
     2041 agcaggcgct cgcacaggcg gcgcgcctgc gcctcgccgt cgtctggctg cacggccacc
     2101 agcgccagca agccggcgcc gatctgaccg acgatttccc cttccacctc gacacgcgcg
     2161 gagagcaccc gctggatcaa cgcgatcatg gcagcctgct ggcgagcgaa gcgtgcagca
     2221 taagcgcggc gtgccaccgg ggaaagcacc atcccctaca ctgcgcggat gcgtgccgac
     2281 atgtggcttc tgtatctcct gctgcgcctg ttcgccctgc tgccattgcg cgcgctgcag
     2341 gccatcggcg caggctgcgg ccgccttgcg ctggcctgcc gcgtggccag cgcacaccac
     2401 gtggcggtga acctggcgat cgcgcgcccg cagctcgacc aggcggcgcg cgaccagctg
     2461 caacgcgcgg cgatggccga ggacggcaag accctcgccg aggtggtgaa gatctggggc
     2521 agcgaccctc gcgcggcgct gaagctggtg cgcgaggtgc gcggcgaggc gctgttcgac
     2581 gcctcgctca aggccggcaa gggcgtcatc atcgccgccc cgcacctcgg ttgctgggag
     2641 ctgctgaact actggctgtg cgcaaagacg ccgatggcga tcctgtaccg cccgccgcgc
     2701 atcgccgcgg tcgagggcct gctgcgcaag gtgcgcggcg cgctcgcccc cgagcaggtg
     2761 cgggccgagg gcgccggcgt gcgcacgctg taccggcggc tggccgccgg cggcaccgtg
     2821 ggcatcctgc cggaccagaa gccgcgcgcc ggcgagggcc agttcgcgcc gttcttcggg
     2881 ctcgacgcca acaccatggt gctgctgccg cggatcgcgc agcgcaccgg cgcgacggtg
     2941 ttgttcgcgt tcgccgaacg gttgccgcgc ggcgccggtt tccgcatccg catcctgccg
     3001 gcgcccgatg gcatcgccga cgccgacctg cgggtcgcct gcaccgcgct caatcgtgg
//
LOCUS       DASSVL010000581         2913 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_338422, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000581 DASSVL010000000
VERSION     DASSVL010000581.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2913)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2913)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2913
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_338422"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            18..911
                     /locus_tag="VFM52_10090"
     CDS             18..911
                     /locus_tag="VFM52_10090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017463935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="septal ring lytic transglycosylase RlpA family
                     protein"
                     /protein_id="HET8765558.1"
                     /translation="MTGWSRSLLPLVLLALAGCSLNPLRHTPRRPVPTATTACRDNTG
                     AAQSNRYCQRNDSTPDIAGIDFSQIPEPVPQALPRSAYGNKSPYTVNGQTYRVLGSAA
                     GYDERGIASYYGSKFNGYKTSNFETYDMYRFSAASKVLPLPSFARVTNLQNGKSVIVR
                     VNDRGPFVANRIIDLSLAAAVRIGIYPKGSGLVEVQGIDPTRPNAEPRPPSVVTTQTG
                     GGVQLYVQVGAFADPGNAERLAARLRGLAFGTVRVVAANIGGRTLQRVQIGPLPDVDT
                     VDRTTARLDALGLPHASVAIQ"
     gene            981..2324
                     /locus_tag="VFM52_10095"
     CDS             981..2324
                     /locus_tag="VFM52_10095"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014402069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine carboxypeptidase family
                     protein"
                     /protein_id="HET8765559.1"
                     /translation="MKPARSLLLAALVAVTGALFAQTTPLPPKPTVPPKPVPTVPQTP
                     IPPAPQPNAQSWVLMDYATGQILTQSNMDQRRAPASLTKIMTEYVVDAELAAGKIHMD
                     DKVYISDYAWKMGGAGTDGSTSFLKLHSYVPLKDLLYGMIIQSGNDSAIALAEHVAGS
                     EPAFAELMNAYAKRLGMDNTHFVNASGYPADNHYSSAHDIAILSRALIKNFPEEYKIS
                     ALKSFEWNGIMQHNRNTLLWSDPTVDGIKTGSTKEAGFCLAASAVRNGMRLIAVDMGG
                     ADMNAATTGDQALLNWGFNFYRTHQLYAAGQTLAAPRLWKGAADTVELGVEQAAAVTI
                     PRGKYSELEATLEIPQTLIAPLQQGQQVGSLKVSFDGKPVLTEPLVVLHAAPQGGFFK
                     RLWDAILLWFHHGKGTTTTAAPTVSIEPPTPVTPAPAASTATPAAPAPSAPAASN"
     gene            2332..2619
                     /locus_tag="VFM52_10100"
     CDS             2332..2619
                     /locus_tag="VFM52_10100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008210127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF493 family protein"
                     /protein_id="HET8765560.1"
                     /translation="MRELGDIQKQDGQGFQFPGSFEITAMGKAGVDLKSRVPAILRAL
                     GLSVLEASVRERPSSQGKYVSVSVVFNCPSREKHEAAHAALRADPDIRYTL"
     gene            2624..>2913
                     /gene="lipB"
                     /locus_tag="VFM52_10105"
     CDS             2624..>2913
                     /gene="lipB"
                     /locus_tag="VFM52_10105"
                     /EC_number="2.3.1.181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005911161.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016979 - lipoate-protein ligase activity
                     [Evidence IEA];
                     GO_process: GO:0009107 - lipoate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl(octanoyl) transferase LipB"
                     /protein_id="HET8765561.1"
                     /translation="MNAARPLLIRHLGRQPYAPVWHAMQAFTDTRGPATADELWLVEH
                     DPVFTLGQAGKPEHVLMPGDIPVLHVDRGGQVTYHGPGQIVAYPLLDLRRLK"
BASE COUNT          529 a         1036 c          913 g          435 t
ORIGIN      
        1 gcagtgtcca cggcccgatg accggctggt cgcgcagcct gctgccactc gtgctgctgg
       61 cattggccgg atgttcgttg aaccccttgc gccacacgcc gcgccgtccc gtaccaaccg
      121 caacgaccgc gtgtcgcgac aacaccggtg ccgcgcagtc gaatcgctat tgccagcgca
      181 acgactcgac acccgacatc gcgggcatcg acttcagcca gatccccgaa cccgtaccgc
      241 aggcgttgcc ccggtcggca tacggcaaca aatccccgta cacggtcaac ggccagacct
      301 accgcgtcct cggcagcgca gcgggatacg acgagcgcgg gatcgcctcg tactacggca
      361 gcaagttcaa cggctacaag accagcaact tcgaaaccta cgacatgtac cgattctcgg
      421 ccgcaagcaa ggtgctgccg ctgccaagct tcgcgcgcgt caccaacctg caaaacggca
      481 agagcgtgat cgtgcgcgtc aacgaccgcg ggccgttcgt ggccaatcgc atcatcgacc
      541 tgtcgctggc ggcagcggtg cggatcggca tctaccccaa gggcagcggg ctcgtcgaag
      601 tgcagggcat cgatcccacg cgtccgaatg cggaaccccg gccgccgtcc gtggtcacaa
      661 cgcagacggg cggcggggtg cagctgtatg tgcaggtcgg tgcatttgcc gatcccggca
      721 acgccgagcg cctggccgca cgcctgcgcg ggctcgcctt cggtaccgtg cgcgtcgtgg
      781 cggccaacat cggcggacgc accctgcagc gggtgcagat cgggccgttg cccgatgtcg
      841 atacggtgga ccgcacgacc gcccgcctgg acgcgctggg actcccgcac gccagcgttg
      901 caatacagta ggcgcctcgc gccaccgggg ctgctgtccc cgtcgcgtaa aattgaatct
      961 ggaaaggacc gagtaagccg atgaaacccg cgcgttcgct gttgctggcc gcccttgtcg
     1021 ccgtgaccgg cgccctgttt gcgcaaacca cgccgctgcc gcccaagccc acggtgccgc
     1081 cgaagcccgt gccgacggtg ccgcagacac cgattccgcc ggcgccgcag cccaacgccc
     1141 agtcgtgggt gctgatggat tacgcaacgg gtcagatcct cacccaaagc aacatggacc
     1201 agcgccgcgc accggcgtcg ctcaccaaga tcatgaccga atatgtggtc gatgccgagc
     1261 tcgccgccgg caagatccac atggacgaca aggtgtacat cagcgactac gcctggaaga
     1321 tgggcggcgc cgggaccgac ggttcgacca gtttcctgaa gctgcattcc tatgtgccgc
     1381 tgaaggatct cctgtacggg atgatcatcc agtcgggcaa tgactccgcg atcgccctgg
     1441 ccgagcacgt cgcgggttcc gagcctgcat tcgccgagct gatgaacgct tacgccaagc
     1501 gcctcgggat ggacaacacc cattttgtga atgcttcggg ctatcccgcc gacaaccact
     1561 acagcagcgc gcacgacatc gcgatcctgt cccgcgcgtt gatcaagaac ttccccgagg
     1621 aatacaagat ttcggccctg aagtcgttcg agtggaacgg catcatgcag cacaaccgca
     1681 acacgctttt gtggtccgac ccgacggtgg atggcatcaa gaccggctcg accaaggaag
     1741 ccggcttctg cctcgcggcg tcggcggtgc gcaacggcat gcgcctgatc gcggtggaca
     1801 tgggcggcgc cgacatgaac gcggccacca cgggcgacca ggcgttgctc aattggggct
     1861 tcaacttcta tcgcacgcat cagctgtatg cggcgggcca gacactggcc gcgccgcggc
     1921 tgtggaaagg cgccgccgac accgtcgagc tgggcgtcga acaggccgct gccgtgacca
     1981 tcccgcgcgg caagtacagc gagctcgagg ccacgctgga aattccacag acgctgatcg
     2041 caccgctgca gcagggccag caggtcggca gcctcaaggt gtcgttcgac ggcaaaccgg
     2101 tgctcaccga gccgctcgtc gtgctgcacg ccgcgccgca aggcggcttc ttcaagcggc
     2161 tgtgggacgc gatcctgctt tggttccacc acggcaaggg caccacgacc acggcggccc
     2221 ccacggtttc gatcgaaccg ccgacgcccg tcacaccggc cccggcagcg agtaccgcca
     2281 cgcccgcggc accggcgccc agcgcgcccg cggcgtccaa ctaggagcgt catgcgcgaa
     2341 ctcggcgaca tccagaaaca ggacggccag ggcttccagt tccccggcag tttcgagatc
     2401 accgccatgg gcaaggccgg cgtcgacctg aagtcgcgcg tgccggccat cctgcgcgcg
     2461 ctgggcttgt cggtgctgga agccagcgtg cgcgagcggc cgtcgagcca aggcaagtac
     2521 gtttcggtga gcgtcgtgtt caattgcccg tcgcgggaaa aacacgaggc cgcgcacgcc
     2581 gcgctgcgtg ccgacccgga tatccggtac acgctgtaac gccgtgaacg ccgcccgtcc
     2641 actcctgatc cgccacctgg gccgccagcc ctatgcgccc gtgtggcacg cgatgcaggc
     2701 gttcaccgac acgcgcggcc cggccaccgc cgacgagctg tggctggtcg aacacgaccc
     2761 ggtcttcacc ctcggccagg ccggcaagcc cgagcacgtg ctgatgccgg gcgacatccc
     2821 ggtgctgcac gtcgaccgcg gcggccaggt gacctaccac ggccccggcc agatcgtggc
     2881 ctatccgctg ctggacctgc gccggctgaa aat
//
LOCUS       DASSVL010000582         2065 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_606478, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000582 DASSVL010000000
VERSION     DASSVL010000582.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2065)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2065)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2065
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_606478"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..244)
                     /locus_tag="VFM52_10110"
     CDS             complement(<1..244)
                     /locus_tag="VFM52_10110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8765562.1"
                     /translation="MPEFPNPRRRWLGVLVTALVPACAPAWAATSVAAVAIHTRSDRM
                     TLQLAKAPQIYIAGVFNDEAVRVVGALLASGKVSAGS"
     gene            complement(334..597)
                     /locus_tag="VFM52_10115"
     CDS             complement(334..597)
                     /locus_tag="VFM52_10115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010482865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DksA/TraR family C4-type zinc finger protein"
                     /protein_id="HET8765563.1"
                     /translation="MAIGWAGDGAVQDQIDATVADGVQRARHQLARGPGRLRCEECDA
                     PIPAARRKAVPGVRLCVACQQARDAEHAANLYNRRGSKDSQLR"
     gene            783..1355
                     /locus_tag="VFM52_10120"
     CDS             783..1355
                     /locus_tag="VFM52_10120"
                     /inference="COORDINATES: protein motif:HMM:NF012481.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin domain-containing protein"
                     /protein_id="HET8765564.1"
                     /translation="MGMFQLNWVKELIGEPGVRRDAGTAPAIVAATFAPGPVLLAYAT
                     QTGVTEDLANATHEQLLAAGIETELVELNDLDLDKLAATPQALFLTSTTCDGDPPDMA
                     EAFAEERMVERAPLERLQYGLLALGDRAYEHFCGFGHALDGWLQACGARPWFPCIEVD
                     DEDGDALDRWHAQVAALVPKVAAAAGPVTP"
     gene            1395..1877
                     /locus_tag="VFM52_10125"
     CDS             1395..1877
                     /locus_tag="VFM52_10125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8765565.1"
                     /translation="MHIELPAALRERLSGIRWFALAAVLALVIGGLVAAAVAHAPTQP
                     MVWMVAFLVLVTGFAQMVLALGQGLLPEHLPSATWRHGEWWLFNLGNLGVIVGTLRMQ
                     PPLVMLGTVLFIASLVAFYVGVRGGKAGWLLHAFRAVLVVVCAGACVGLALSLGGLRV
                     "
BASE COUNT          299 a          711 c          690 g          365 t
ORIGIN      
        1 ccgaaccggc cgacaccttg ccggaggcca gcaaggcgcc caccacgcgc acggcctcgt
       61 cgttgaagac gccggcgatg tagatctgcg gggccttcgc cagctgcagc gtcatgcggt
      121 cgctgcgggt gtggatggcg acggccgcca cggacgttgc cgcccaagcc ggcgcgcagg
      181 ccggcaccag tgcagtgacg agcacgccca gccagcggcg gcgcggattc gggaattcag
      241 gcaatgcggg ttccgggcac acgaaaacca cgagtttccc gcatcaccgc cgtgccttgc
      301 ctgaatacgc cggcgaacag cctgccggcc tggtcaacgc aactggctgt ccttgctgcc
      361 gcgccggttg tagagattgg ccgcgtgctc cgcatcgcgc gcctgctggc aagccacgca
      421 cagccgcacg cctggcaccg ccttgcggcg cgccgcggga atcggcgcgt cgcactcctc
      481 gcaacgcagc cgcccggggc cacgcgcgag ctggtggcgc gcgcgctgca cgccgtcggc
      541 gacagtcgca tcgatctggt cctgcacggc gccatcgccg gcccaaccga tagccatggc
      601 cacctccacg tcggtacacc cttgcactat gtggccgctg atcggcaaat tccatcgcgg
      661 gttgatcttt tccccgcgtt gacccatatc gtccggtgcc gccgtcgacg gtttaagata
      721 agcggctgaa ttgtctgcga tgcattggct cgcaggtgtg ccgccactca tcacacgacg
      781 tcatgggcat gtttcaactc aactgggtca aagagctgat cggcgaaccg ggcgtcaggc
      841 gtgatgccgg caccgcccct gccatcgttg ccgcgacctt tgcgccgggc ccggtattgc
      901 tggcctatgc aacgcagacc ggcgtcaccg aggatcttgc caacgccacc cacgagcagc
      961 tcctcgcggc cggcatcgag accgagctgg tcgaactgaa cgacctcgac ctcgacaagc
     1021 tggccgccac gccgcaggcg ctgttcctga ccagcaccac ctgcgacggc gatccgccgg
     1081 acatggccga ggcgtttgcg gaagagcgca tggtggaacg cgcgccgctg gagcgcctgc
     1141 aatacggcct gcttgcgctg ggagaccgtg cctacgaaca cttctgtggc ttcggtcatg
     1201 cgctcgacgg atggctgcag gcttgcggcg cgcgtccctg gttcccgtgc atcgaagtgg
     1261 acgacgaaga cggcgatgcg ctggatcgct ggcatgcgca ggtcgccgcg ctggtaccaa
     1321 aggtcgcagc cgccgccggc ccggtcacgc cgtgacagca tgacgggcag cattcttcgg
     1381 cgggactgaa cccgatgcac atcgagcttc cggcagcatt gcgtgaacgc cttagcggta
     1441 ttcgctggtt cgcgcttgcc gcggtgctgg cgctggtgat cggcggtctg gtcgcggcgg
     1501 ccgtggccca tgcgcccacg caacccatgg tgtggatggt ggcgttcctg gtgctggtca
     1561 ccggcttcgc gcagatggtg ctggcgctcg gccaggggct gttgcccgag cacctgccgt
     1621 ccgccacctg gcggcacggc gaatggtggc tgttcaacct tggcaacctc ggcgtcatcg
     1681 tcggcacgct gcgcatgcag ccgccgctgg tcatgcttgg caccgtgctg ttcatcgctt
     1741 cgctggtggc gttctacgtc ggcgtgcgtg gtggcaaggc cggctggctg ttgcacgcgt
     1801 tccgcgccgt gctggtggtg gtttgtgccg gggcctgcgt cggcctggcg ctgtcgcttg
     1861 gcggcctgcg cgtctgaggc cggcgcggca cggaaacgat ccgttcgcgg ccgggcgctt
     1921 tcgccgtgga ctgatcccgc gcatgctggc gggcatcttc cacggaggct cgcctcatga
     1981 tcgaacgcag acctttctcc ctgctcggcg gcgccaacca tggttggctt gacaccaagc
     2041 accacttctc gtttgccgac tacca
//
LOCUS       DASSVL010000583         3382 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_818368, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000583 DASSVL010000000
VERSION     DASSVL010000583.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3382)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3382)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3382
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_818368"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(244..447)
                     /locus_tag="VFM52_10130"
     CDS             complement(244..447)
                     /locus_tag="VFM52_10130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006470569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0001072 - transcription antitermination
                     factor activity, RNA binding [Evidence IEA];
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein"
                     /protein_id="HET8765566.1"
                     /translation="MATGTVKWFNTTKGYGFIMPQDGGKDVFVHITAVQAAGLRGLNE
                     GQKVTYEVAMERGKAAATNLRLA"
     gene            complement(769..2406)
                     /gene="groL"
                     /locus_tag="VFM52_10135"
     CDS             complement(769..2406)
                     /gene="groL"
                     /locus_tag="VFM52_10135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005920153.1"
                     /note="60 kDa chaperone family; promotes refolding of
                     misfolded polypeptides especially under stressful
                     conditions; forms two stacked rings of heptamers to form a
                     barrel-shaped 14mer; ends can be capped by GroES;
                     misfolded proteins enter the barrel where they are
                     refolded when GroES binds; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chaperonin GroEL"
                     /protein_id="HET8765567.1"
                     /translation="MAAKDVVFGGEARARMVEGVNILANAVKVTLGPKGRNVVLERSF
                     GAPTVTKDGVSVAKEIELKDKLMNMGAQMVKEVASKTSDNAGDGTTTATVLAQAIVRE
                     GMKYVAAGMNPMDLKRGIDKAVGALTEQLKKASKPTTTSKEIAQVGSISANSDESIGE
                     IIAKAMDKVGKEGVITVEDGKSLDNELEVVEGMQFDRGYVSPYFITNAEKMIAEMDQP
                     YILIHEKKLSGLQPMLPLLESIVQSGRPLLIIAEDVEGEALATLVVNKLRGGLKVAAV
                     KAPGFGDRRQAMLEDIAILTGGTVISEDLGIKLENVKLNDLGKAKKVLIEKENTTIVE
                     GSGKKNDIVGRCNQIRAQVEETTSDYDREKLQERLAKLAGGVAVIRVGGSTEVEVKER
                     KDRVDDSLHATRAAVEEGIVPGGGVALARASLILAKLKADNDDQRFGVEIVRKAVMMP
                     LRQIAENAGEDGAVIAGKVLDKDEYNWGFDAQTGEFKDLVQSGVIDPTKVVRSALQNA
                     GSVAGLLVTTEAMIAEKPEKKAPPMPPGGGGMGDMDF"
     gene            complement(2457..2747)
                     /gene="groES"
                     /locus_tag="VFM52_10140"
     CDS             complement(2457..2747)
                     /gene="groES"
                     /locus_tag="VFM52_10140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011785505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone GroES"
                     /protein_id="HET8765568.1"
                     /translation="MKLRPLHDRVIVKRLEQETKTASGIVIPDNAAEKPDQGEILAVG
                     PGKRNDKGDFVALNVKVGDRVLFGKYSGQTVKVDGDELLVMREEDLFAVVEK"
     gene            complement(2879..>3382)
                     /locus_tag="VFM52_10145"
     CDS             complement(2879..>3382)
                     /locus_tag="VFM52_10145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8765569.1"
                     /translation="EMAQLALQAGFPGEAQKVLEEGYARAGLGQPPQAARANPLREQV
                     RKAVATDTQALSQASAATAKNADVLMNMGYALATTGQPDKGLSLMEQALARGGLKKPD
                     EARLHLGVAQFNAGRRDAAVQTLQGVKGKDGSGDLAHLWVLLAQSQANAAAAAAAPAP
                     AASGTAR"
BASE COUNT          499 a         1138 c         1083 g          662 t
ORIGIN      
        1 ccccgccggc gtgtgattct catgttttac ccagacctcg caccccgccc gccgggacag
       61 caagggccag ttgtactggg cggtcggggg gaagttatcg aggatcaggc ggtgggccgc
      121 ctccagttcg ggcagggtga acatgatgga tcccctggga tcggataggc gacagaatcg
      181 aacaggccgc ccttgggttt ccccagggcg gcctgcactt cgagtcttca ggcctggata
      241 aggtcaggcg agccggaggt tggtggccgc ggccttgccg cgttccattg caacctcgta
      301 ggtcaccttc tggccttcat tcagtccgcg caggccagcg gcctgaacag cggtgatgtg
      361 gacgaacaca tcctttccgc catcctgcgg catgatgaag ccataccctt tggtggtgtt
      421 aaaccacttg acagtaccag tagccatatc tgcgttgttc tccgccatgg gaccgcacgt
      481 gcgcgcggca aacagacaac cgggcctttg gacgtcttga gagcacccga ggacggaggc
      541 gcagcaagcc tagccaaaat gcgattgcat cggcagttgg ccctgaaatc ctgccgaatg
      601 tcaatgacgc tcacgaaccg ttgtgtgaga attggcccac ccgccagtgg gttgcgtgac
      661 gtttggatgc gcggtgggtt cggaaaaaga atgcggcggg cccgagaccc gccgcaccgg
      721 acaaccgatc gaaaccgggc gccgccatgg cagcgcccgc cctcgatttt agaagtccat
      781 atcacccatt ccgccaccac cggggggcat cggcggagcc ttcttctccg gcttctcggc
      841 gatcatcgcc tcggtggtga cgagcagtcc cgcaaccgat ccggcattct ggagcgccga
      901 gcggacgacc ttggtggggt cgatcacgcc ggactgcacc aggtccttga actcgccggt
      961 ctgcgcgtca aagccccagt tgtactcgtc cttgtccagc accttgccag cgatgaccgc
     1021 gccgtcctcg ccggcgttct cggcgatctg gcgcagcggc atcataaccg ccttgcgcac
     1081 gatctcgacg ccgaagcgct gatcgtcgtt gtccgccttc agcttcgcca ggatcagcga
     1141 cgcacgcgcc agggcgacgc cgccgcccgg gacaatgccc tcctcgaccg cggcgcgggt
     1201 cgcgtgcagg ctgtcgtcaa cgcggtcctt gcgctccttc acctcgacct cggtgctgcc
     1261 accgacgcgg atgacggcga cgccgcccgc cagcttcgcg agacgctctt gcagcttctc
     1321 gcggtcgtag tcgctggtgg tctcctcgac ctgcgcgcgg atctggttgc agcggccgac
     1381 gatgtcgttc ttcttgcccg agccttcgac gatcgtggtg ttctctttct cgatgagcac
     1441 cttcttcgcc ttgccgaggt cgttcagctt gacgttctcg agcttgatgc cgaggtcttc
     1501 gctgatcacc gtgccgccgg tgaggatggc aatatcctcg agcatcgcct ggcggcgatc
     1561 gccgaagcca ggcgccttca ccgccgcgac cttcaggccg ccgcgcagct tgttcaccac
     1621 cagtgtggcc aacgcctcac cttccacgtc ctcggcgatg atcagcagcg gacggccgga
     1681 ctgcacgatg ctctccagca gcggcagcat cggctgcagg ccggacagct tcttctcgtg
     1741 gatcaggatg tagggctgat ccatctcggc gatcatcttc tccgcattgg tgatgaagta
     1801 cggagaaaca tagccgcggt cgaactgcat gccctcgacg acctcgagct cgttgtcgag
     1861 cgacttgccg tcctcgacgg tgatcacgcc ttccttgccg accttgtcca tcgccttggc
     1921 gatgatctcg ccgatggatt cgtcgctgtt ggcggagatg gagccgacct gcgcgatttc
     1981 cttggaggtg gtcgtcggct tggaggcctt cttcagctgc tccgtcaggg cgcccacggc
     2041 cttgtcgatg ccgcgcttca ggtccatcgg gttcatgccg gcggccacgt acttcatgcc
     2101 ttcgcgcacg atggcctggg ccagcacggt cgcggtggtg gtgccgtcac cggcgttgtc
     2161 gctggtcttg gaagcgactt ccttgaccat ctgggcgccc atgttcatga gcttgtcctt
     2221 gagctcgatc tccttggcga ccgacacacc gtccttggtg acggtggggg cgccgaacga
     2281 gcgttccagc accacgttac ggcccttggg gcccagcgtg accttgaccg cgttggccag
     2341 gatgttcacg ccttcgacca tgcgggcgcg ggcctcgccg ccgaacacga cgtctttagc
     2401 tgccatgact gactctccgg aaattcaaag atggaatggg cgggcgggga gaaggcttac
     2461 ttctcgacca cggcgaagag gtcctcttcg cgcatcacca gcagttcgtc gccatcgacc
     2521 ttgacggtct ggccgctgta cttgccgaac agcacacggt cgccgacctt gacgttcagg
     2581 gccacgaagt cgcccttgtc gttgcgcttg ccgggaccga cggccaggat ctcgccctgg
     2641 tcgggctttt ccgccgcgtt gtcggggatc acgatgccgg aggcggtctt ggtctcttgc
     2701 tccaggcgct tgacgatcac gcgatcgtgc aacggacgaa gtttcattgc atctccttca
     2761 atggtgcagg ggggcgacga cgccggccgg cgcgtcaccg ggttgggtta gcactcgtcg
     2821 tcgacgagtg ctagcagtcg gattataggg accgtccgtg acggttcaag gggcaggctc
     2881 agcgggccgt gccggaagcg gccggcgccg gcgcggcggc cgccgccgcc gcgttcgcct
     2941 gcgactgcgc cagcagcacc cacaggtgcg ccaggtcgcc gctgccgtcc ttgcccttca
     3001 cgccctgcag cgtctgcacg gccgcgtcgc ggcggccggc gttgaactgg gccacgccca
     3061 ggtgcagccg ggcctcgtcg ggcttcttca ggccgccgcg ggccagcgcc tgctccatca
     3121 gcgacaggcc cttgtcgggc tggccggtgg tcgccagcgc gtagcccatg ttcatcagca
     3181 cgtcggcgtt cttcgcggtg gcggcgctgg cctggctcag cgcctgggtg tcggtggcca
     3241 ccgccttgcg cacctgctcg cgcagcgggt tggcgcgcgc ggcctgcggc ggctggccca
     3301 gcccggcgcg ggcgtagcct tcctccagca ccttctgcgc ctcgccgggg aagccggcct
     3361 gcagcgccag ctgcgccatc tc
//
LOCUS       DASSVL010000584         2844 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1327499,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000584 DASSVL010000000
VERSION     DASSVL010000584.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2844)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2844)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2844
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1327499"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1215
                     /locus_tag="VFM52_10150"
     CDS             <1..1215
                     /locus_tag="VFM52_10150"
                     /EC_number="2.7.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007804786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetylglutamate kinase"
                     /protein_id="HET8765570.1"
                     /translation="AKRFAVVKVGGAVLRDELQDLASSLTFLQQVGLTPIVLHGAGPQ
                     LDAELQAAGIEKQTVNGLRVTSPKALGIVRQVFMQQNLKLVEALQGMDTRATSVAAGV
                     FLASYLDRDRLGMVGKVEHVNLAPIEAGLRANSIPVIASLGETAEGQLLNINADVAAN
                     ELVRVLQPYKVVFLTGTGGLLDEHGKVIDSINLSTEYDALMAQPWITGGMRLKLEQIA
                     DLLNDLPLTSSVSITRPAELAKELFTHKGSGTLVRHGEKVRRYTAWDELDRERLRGLI
                     ESSFGRKLVDDYFEHTVPYRVYVSENYRAAMILTMQDGLPYLDKFAVLDDAQGEGLGR
                     AVWQVMRAENPKLFWRSRHNNQVNIFYYAESDGCLKQTRWKVFWYGLDGNFDTIARCV
                     DYCEGHSPTLVD"
     gene            1229..2185
                     /gene="argC"
                     /locus_tag="VFM52_10155"
     CDS             1229..2185
                     /gene="argC"
                     /locus_tag="VFM52_10155"
                     /EC_number="1.2.1.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015447224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003942 -
                     N-acetyl-gamma-glutamyl-phosphate reductase activity
                     [Evidence IEA];
                     GO_process: GO:0006592 - ornithine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyl-gamma-glutamyl-phosphate reductase"
                     /protein_id="HET8765571.1"
                     /translation="MTQQKKTLGIVGARGYTGAELIRLVAGHPALELAFVSSRELDGQ
                     RVAEHNEAYRGELRYEKLDPEAVAAKRADVVILALPNGKAAPFVAALDQATPDTLIVD
                     LSADYRFDSGWYYGLPELTRNKWRGEKRIANPGCYATAMELSIAPVKDLLAAPPVCFG
                     VSGYSGAGTTPSDKNDPAKLHDNLMPYALVGHGHEKEAGFQLGIPVEFMPHVAPHFRG
                     LTVTTNLYLSHPLTREQVLARFHHAYDDEPLVRVEENAPWVSQVANTHRAEIGGFTLS
                     PDGKRLVTVAALDNLLKGAATQAMQNINRALGLDEMTGINLA"
     gene            2272..>2844
                     /locus_tag="VFM52_10160"
     CDS             2272..>2844
                     /locus_tag="VFM52_10160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015447225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lyase family protein"
                     /protein_id="HET8765572.1"
                     /translation="MTQPLWQKSGIQIDARIMRFMAGDDVLLDREFFLHDVSASKAHV
                     EGLANIGVVSADEAVALKRELDALAADFASGAFVLDERFEDGHSAIEARLTERLGDAG
                     RRVHTGRSRNDQVLVATRLWLKDKLAALDAACRAIAQVCLDRAAQPAIPLPGYTHLQR
                     AVVSSTAMWFAGFAEGFIDNALRAQQTLALI"
BASE COUNT          491 a          945 c          959 g          449 t
ORIGIN      
        1 gccaagcgtt ttgcggtggt gaaggtgggc ggcgcggtgc tgcgcgacga gttgcaggat
       61 ctcgcctcct cgctcacctt cctgcagcag gtgggcctga cgccgatcgt gctgcacggc
      121 gccggcccgc aactggacgc cgaactgcag gcggcgggca tcgagaagca gaccgtcaac
      181 ggcctgcgcg tcacctcgcc caaggcgctc ggcatcgtgc gccaggtgtt catgcagcag
      241 aacctgaaac tggtggaagc gctgcagggc atggatacgc gtgcgacctc ggtcgccgct
      301 ggcgtgttcc tcgccagcta tctcgaccgc gaccggctcg gcatggtcgg caaggtggag
      361 cacgtcaacc tggcgccgat cgaggccggg ctgcgcgcga actccatccc ggtcatcgcg
      421 agcctgggtg aaaccgccga gggccagctg ctcaacatca atgccgatgt ggccgcgaac
      481 gaactggtgc gcgtgctgca gccgtacaag gtggtgttcc tcaccggcac cggcggcctg
      541 ctcgacgagc acggcaaggt gatcgactcg atcaacctgt ccaccgaata cgatgccttg
      601 atggcgcagc cgtggatcac cggcggcatg cgcctgaagc tggagcagat cgcggatctc
      661 ctgaacgact tgccgctcac ctcgtcggtg tcgatcacgc ggccggcgga gctggcgaag
      721 gagctgttca cccacaaggg ttccggcacg ctggtgcggc acggcgaaaa ggtgcgccgc
      781 tacaccgcgt gggacgagct ggatcgcgag cgcctgcgcg ggctgatcga gtcgagcttc
      841 ggccgcaagc tggtggacga ttatttcgag cacaccgtgc cgtatcgcgt ctacgtgagc
      901 gagaactacc gcgcggcgat gatcctgacc atgcaggacg gcctgccgta cctcgacaag
      961 ttcgcggtgc tcgacgacgc gcagggcgaa ggcctgggcc gcgccgtgtg gcaggtgatg
     1021 cgtgcggaaa atccgaagct cttctggcgc tcgcggcaca acaaccaagt caacattttc
     1081 tattacgccg aatccgacgg ctgcctcaag caaacccgct ggaaggtttt ctggtacggc
     1141 ctggacggca atttcgacac catcgcgcgc tgcgtggatt actgcgaagg gcacagcccg
     1201 acgctggtgg attgaggaac gaacggccat gacgcagcaa aagaaaaccc tcggcatcgt
     1261 cggcgcgcgc ggctacaccg gcgccgagct gatccggttg gtcgccggcc acccggcgct
     1321 cgaactcgcc ttcgtctcct cgcgcgagct ggacggccag cgcgtcgccg agcacaacga
     1381 ggcgtatcgc ggcgagctgc gctacgagaa gctcgacccc gaggcggtgg cggccaagcg
     1441 cgccgacgtg gtgattctcg cgttgccgaa cggcaaggcg gcgccgttcg tcgccgcgct
     1501 ggaccaggcc acgcccgata cgctgatcgt cgacctgtcg gcggattacc gcttcgattc
     1561 cggctggtac tacggcctgc ccgagctcac ccgcaacaag tggcgcggcg aaaagcgcat
     1621 cgccaatccc ggttgctacg cgacggcgat ggagctttcg attgcgccgg tgaaggatct
     1681 gctcgccgcg ccaccggtgt gcttcggcgt gtcgggctac tccggcgccg gcaccacgcc
     1741 gtcggacaag aacgacccgg caaagctgca cgacaatctg atgccgtacg cgctggtcgg
     1801 ccacggccac gagaaggagg ccgggttcca gctcggcatc ccggtcgagt tcatgccgca
     1861 cgtcgcgccg catttccgcg ggctcaccgt caccaccaat ctctacctgt cccacccgct
     1921 cacgcgcgag caggtgctgg cgcgattcca ccacgcctac gacgacgaac cgctggtgcg
     1981 ggtcgaggaa aacgcgccgt gggtcagcca ggtggcgaat acccaccgcg cggaaatcgg
     2041 cggcttcacg ctgtccccgg atggcaagcg cctggtcact gtcgccgcgc tggacaacct
     2101 gctgaagggc gccgcgacgc aggcgatgca gaacatcaac cgcgcgctgg ggctggacga
     2161 aatgaccggc ataaacctgg cgtagaggcc cgcttgcggg cgatgtcgtt ttcccggagt
     2221 tcgcgcggat cacccgcaag cgagctccta caagagaaac tggattccct catgacccaa
     2281 cctctttggc agaaatccgg catccagatc gacgcgcgga tcatgcgctt catggccggc
     2341 gacgacgtgc tgctggatcg cgagttcttc ctgcacgacg tctccgccag caaggcgcac
     2401 gtcgaggggc tggcgaacat cggcgtggtc agcgccgacg aggcggtggc gctcaagcgc
     2461 gagctggatg cgctggcagc ggatttcgcc agcggcgcgt tcgtgctcga cgagcgcttc
     2521 gaggatggcc actcggcgat cgaggcgcgg ctgaccgagc gcctgggcga cgccgggcgc
     2581 cgcgtgcaca ccgggcgcag ccgcaacgac caggtgctgg tggcgacgcg cttgtggctc
     2641 aaggacaagc tcgccgccct ggatgccgcc tgccgcgcga ttgcgcaggt gtgcctggat
     2701 cgcgccgcgc agccggcgat tccgctgccg ggctacaccc acctgcagcg cgcggtggtg
     2761 tcgtccaccg cgatgtggtt tgccggcttt gccgagggct tcatcgacaa cgcactacgt
     2821 gcgcagcaga cgctggcgct gatc
//
LOCUS       DASSVL010000585         3609 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_366954, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000585 DASSVL010000000
VERSION     DASSVL010000585.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3609)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3609)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3609
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_366954"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(134..2482)
                     /locus_tag="VFM52_10165"
     CDS             complement(134..2482)
                     /locus_tag="VFM52_10165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017463469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1631 family protein"
                     /protein_id="HET8765573.1"
                     /translation="MLGATAPLCAQWLEAALRRCLDRFDKELFQRAEHAHGDGEQQRC
                     FDTRALLNQRRATFMQAFADRVRDDFLHLGMPTASADEALEHQPLRLLERGEQELAAA
                     RAKLVSRSEARQRAVLAQLAYRYAVLVGAPPLEGAALPVGPACLAAALRAAIATIELP
                     QEHRLLLLQTFEKAVLGDIGTLYLRIDDALSGDGLLPQLRPYTSVRLATGGRGAARSD
                     TTPPQARDEGATGGAAPDNAASAPGAAPISVMENLRELLAERRLGVGSGNAGQAATTD
                     ELQSALGALQDHLAQVTDQASRELRSAQRLRDELLLQLNAHKPAGAPPTRLSAEQDDT
                     VELMALLFEQIGQQMQHGPHAQSVLSGLQLPMLRLAVSDHEFLERQEHPGRRLLSAVA
                     DAANEWLDGPDGDSDHQLTDRLQQLVQRAQKEPPTAGLYTSLLADIEHQLAVLNRRAQ
                     AAERRHVEAMQGRERLDQARQRAKELLAGRFAENPPRGLLRALLDRAWSDVLSLTLLQ
                     NGEDSDAFAQRLHVTDQLLGREAVADITWLRHEVQAGLRQIGMDGEEASQVALRLIGD
                     EPGGAPASRAVAPAAAQPTAAATPPTTPTGGAPSARLPHPLVPAATAAIPANAHQTPP
                     PRPAQQAKPAAGTAPVAPPSSTDLAMRLKQRTRLGEAASSAPAESDAERPLGPQEARV
                     YNRLRQLPFGTWFEFVDAKTGAAAQRKLAWFSPVTGNSLFVTRRGGRGEEMNLRELAR
                     GIVYGQVREVPARQESLLDRAWHSLAGNLRRGDERRSYGVRP"
     gene            complement(2628..>3609)
                     /gene="hemW"
                     /locus_tag="VFM52_10170"
     CDS             complement(2628..>3609)
                     /gene="hemW"
                     /locus_tag="VFM52_10170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017463464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051989 - coproporphyrinogen dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="radical SAM family heme chaperone HemW"
                     /protein_id="HET8765574.1"
                     /translation="REIVSAFFGGGTPSLFAPDLIARFLAGARQRLRFADGCEITLET
                     NPGTVEHGRFDGYLAAGVNRISFGVQSFDDDKLRRLGRIHSAAEAESAVKLAQDAGYA
                     NINLDLMYALPKQTLEGALADVERAIALAPAHISHYQLTIEPNTVFAAYPPPLPDDDH
                     AWAMQEACQARLAAAGYHQYEISAYARPDRQCRHNRNYWQFGDYLGIGAGAHGKLSDP
                     ASGNVRRRWKARSPRAYVEAAGGAARIGGDGTVKPEELPFEYMLNALRLIDGVPMADF
                     TARTGLPTDAIAAPLANARQRSWLTAEDGRLHTTALGQRFLNDVIESFMA"
BASE COUNT          444 a         1196 c         1375 g          594 t
ORIGIN      
        1 tgccggccga tcagcagcat gccgctggcc gacaggttgc acaggttgcc gagcggccgc
       61 tcggtgacga cgtcggtggc gatgacgccg gcgacgaccg gtttgcgcgg cgcgcgccgc
      121 tgttcgcgcg gactcatggg cgcaccccgt agctgcggcg ctcgtcaccg cggcgcaggt
      181 tgcctgccag cgaatgccag gcgcggtcga gcaggctttc ctggcgcgcc ggcacctcgc
      241 gcacctggcc gtagacgatg ccgcgcgcca gctcgcgcag gttcatctcc tcaccgcggc
      301 cgccgcgacg ggtcacgaac aggctgttgc cggtgaccgg cgagaaccac gccagcttgc
      361 gctgcgcggc cgctccggtc ttcgcgtcga cgaattcgaa ccaggtgccg aacggcaact
      421 ggcgcaagcg gttgtagacg cgggcttcct gcggaccgag cgggcgttcg gcatccgatt
      481 ccgcgggggc cgacgacgcg gcttcgccaa gccgggtgcg ctgcttgagg cgcattgcca
      541 ggtcggtgga gctgggcggc gcgacgggcg cggtgccggc cgcgggcttg gcctgctgcg
      601 ccggacgcgg tggtggtgtc tggtgggcgt ttgctgggat tgcggccgtt gctgccggca
      661 ccagtggatg gggcaggcgc gccgatggtg caccaccggt cggcgtggtg ggtggtgtgg
      721 ccgcggcggt tggctgcgcc gctgccggcg ccacggcacg cgaggctggc gcgccgccgg
      781 gttcgtcacc gatcaggcgc aatgcgacct ggctcgcttc ttcgccgtcc atgccgatct
      841 gccgcagccc ggcctgcacc tcgtggcgca gccaagtaat gtccgcgacc gcttcgcggc
      901 ccagcagttg atcggtcacg tgcaggcgct gcgcgaaggc atcgctgtcc tcgccgttct
      961 gcagcagggt gagcgagagc acgtcggacc atgcgcggtc gagcagcgcg cgcagcaggc
     1021 cgcgcggcgg gttttcggca aagcgtccgg caagcagctc cttggcgcgc tggcgcgcct
     1081 ggtccagccg ctcgcgcccc tgcatcgctt cgacgtgccg ccgctcggcg gcctgtgcgc
     1141 gccggttcag cactgccaac tggtgctcga tgtcggccag caggctggtg tagagcccgg
     1201 ccgtcggtgg ctccttctgt gcgcgttgca cgagttgctg caagcggtcg gtgagctggt
     1261 ggtcgctgtc gccgtcgggg ccgtcgagcc attcgttggc ggcatcggcc accgcgctca
     1321 gcaggcgccg gccggggtgt tcctggcgtt cgagaaactc gtggtcgctg accgccaggc
     1381 gcagcatcgg caactgcaac ccgctcagca ccgactgcgc gtgcggccca tgctgcatct
     1441 gctgcccgat ctgctcgaac agcagggcca tcagctcgac ggtgtcgtcc tgctcggcgc
     1501 tgagccgggt gggtggtgcg ccggctggct tgtgggcgtt gagctgcagc agcaattcgt
     1561 cgcgcaggcg ctgggcgctg cgcagttcgc ggctggcctg gtcggtgacc tgggccaggt
     1621 gatcctgcag cgcgccgagc gcggattgca gctcgtccgt ggtggccgcc tggccggcgt
     1681 tgccgctgcc gacgccgagg cggcgttcgg ccaggagctc gcgcaggttt tccatcaccg
     1741 agatgggcgc ggcgccgggc gcggatgcgg cgttgtcggg tgccgcgccg cccgtcgcac
     1801 cttcgtcgcg ggcctggggc ggcgtggtgt cactccgcgc cgcgccgcgt ccgccggttg
     1861 ccaggcggac gctggtgtag ggacgcagct gtggcagcag gccgtcgccg ctcagggcat
     1921 cgtcgatgcg caggtacagc gtgccgatgt cgccgagcac ggccttttcg aaggtctgca
     1981 acagcagcag gcggtgttcc tgcggcagct cgatggtggc gatggccgcg cgcagggcgg
     2041 cggccaggca cgctggcccg accggcagcg ccgcgccttc gagcggcggc gcgccgacca
     2101 gcaccgcgta gcggtacgcc agttgcgcca gcaccgcgcg ctggcgtgcc tcgctgcggg
     2161 agaccagctt ggcgcgggcg gcggccagct cctgttcgcc gcgttcgagc aggcgtagcg
     2221 gttggtgttc gagcgcttcg tcggcgctcg ccgtcggcat gcccaggtgc aggaaatcat
     2281 cccggacccg gtccgcgaaa gcctgcatga aggtggcgcg ccgctggttc agcagcgcgc
     2341 gggtatcgaa gcaccgttgc tgctcgccat cgccgtgcgc gtgttcggcg cgctggaaaa
     2401 gctctttgtc gaagcgatcc aggcagcgcc gcagtgcggc ttccagccac tgcgcgcaca
     2461 gtggggcagt ggcgccgagc agtcgctgcg tgcgggcggg ccaacggtgc gcgccggtgg
     2521 ccgcgttcgt tgcctgtcga cggtggtccc ccacatccat gacgcaatcc ggcagaacgt
     2581 tggcggcgag tgtaggcggg tttttgcagg gccgccaacg gaaagcgtca ggccatgaat
     2641 gactcgatca cgtcgttgag aaagcgctgg cccaacgccg tcgtgtgcag gcgcccgtct
     2701 tcggccgtga gccagctgcg ctggcgggca ttggccaggg gagcggcaat ggcatcggtt
     2761 ggcaggccgg tgcgcgcggt gaagtcggcc atcggcacgc cgtcgatcag gcgcagcgcg
     2821 ttgagcatgt actcgaacgg caactcttcc ggcttgaccg tgccgtcgcc gccgatgcgg
     2881 gccgcgccgc cggcggcttc gacataggcc cgtgggctgc gtgccttcca gcgccgccgc
     2941 acgttgccgc tggcggggtc gctgagcttg ccgtgcgccc cggcgccgat gccgaggtaa
     3001 tcgccgaact gccagtaatt gcggttgtgc cggcattggc ggtcgggccg tgcgtaggcg
     3061 gaaatctcgt attggtgata accggcggca gcgaggcggg cctggcaggc ctcctgcatc
     3121 gcccacgcgt ggtcgtcgtc cggcagcggc ggcggatagg ccgcgaacac cgtgttcggt
     3181 tcgatcgtga gctggtagtg cgagatgtgg gcgggggcca gcgcgatcgc gcgttccacg
     3241 tcggccagcg cgccttccag tgtctgtttc ggcagcgcgt acatcaggtc gaggttgatg
     3301 ttggcgtagc cggcgtcctg cgcgagtttc accgcgctct cggcctcggc ggcggaatgg
     3361 atgcgaccga gccggcgcag cttgtcgtcg tcgaagctct gcacgccgaa cgagatgcgg
     3421 ttgacgccgg cggcgagata accgtcgaag cggccgtgct cgaccgtgcc gggattggtt
     3481 tccagcgtga tctcgcagcc gtccgcgaag cgcagccgtt gccgtgcgcc ggcgaggaag
     3541 cgcgcgatca ggtcgggcgc gaacaggctc ggcgtgccgc cgccgaagaa cgcgctgacg
     3601 atttcgcgg
//
LOCUS       DASSVL010000586         3144 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_13648, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000586 DASSVL010000000
VERSION     DASSVL010000586.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3144)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3144)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3144
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_13648"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..406)
                     /locus_tag="VFM52_10175"
     CDS             complement(<1..406)
                     /locus_tag="VFM52_10175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007514191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase N-terminal domain-containing
                     protein"
                     /protein_id="HET8765575.1"
                     /translation="MRFLYTLAMYLATPLIVLRLALRGFRSRPYYWRWAERFGFFSAP
                     AGVSGSLWVHAVSVVEVNAAEPLVKALKRDYPDAPLVVTTVTPTGTARVQQLFGDSVF
                     HVYLPYDLPYAVNRFLKAVRPRLALIVETEIWP"
     gene            493..1419
                     /gene="lpxL"
                     /locus_tag="VFM52_10180"
     CDS             493..1419
                     /gene="lpxL"
                     /locus_tag="VFM52_10180"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007514189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LpxL/LpxP family Kdo(2)-lipid IV(A)
                     lauroyl/palmitoleoyl acyltransferase"
                     /protein_id="HET8765576.1"
                     /translation="MPGSRRPRFQRALLAPHQWPAWLGVGATWLLARLPYRALMRVGR
                     VLGALACRIPSPRRRIAATNIRLCFPGLDATAQAALVDAHLRDIGLMLTEFALGWLGS
                     KRAIARVPVTLEGLEHLATARAQKRGVLLVGGHFSHLELCARLVSQRIGIAGMYRKMD
                     SAVFEWIVLRARLDYADAMFDKDDIRGTVKYLRAGGTLWYAPDQDMRSKDNVFVPFFG
                     VPAATITATHHLARMSGALVIPFFHRRLPHGQGYALRLGAPLDDFPGPDATADTARIN
                     ACIEAMVREAPEQYLWVHKRFKTRPAGAPAIY"
     gene            1482..2387
                     /locus_tag="VFM52_10185"
     CDS             1482..2387
                     /locus_tag="VFM52_10185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019465058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF535 family protein"
                     /protein_id="HET8765577.1"
                     /translation="MRHFLESMQDRTDWRGSPATRGFYALKYAVRSLYWRGLHAAWLA
                     FIYDDPRMRAMLAHDPRLVERPQHAYISRGLDTVAGYAIIRSHYGFVLARFPGDVVRR
                     IYLAGRAPVGTLVLKDGSTIGIELRRPTGRGREGELALYLVDAADRALSSIIFTIADD
                     GRRLLLGCLQGAAHELGRDAVRDLTRQCHGLRPKNLLLSMLLGLGAAIGTERVFGVGN
                     AAHPFADHPGKIKADYDGFWLECGGVASRDGFYELPPREPVRDIATVDSKHRSAFRRR
                     EALRALACAQLLDALALSLPLARAS"
     gene            complement(2401..>3144)
                     /locus_tag="VFM52_10190"
     CDS             complement(2401..>3144)
                     /locus_tag="VFM52_10190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015446623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-antigen ligase family protein"
                     /protein_id="HET8765578.1"
                     /translation="ALWAAQQRWGWRGLVAAFLLMLGPVLLAGSRAAWLCYGLVALAC
                     AWRATRSWRRFAACLAVAAAVVVLAGAVAWQTSTRFEARMARTLDALQGTRSGLDTAL
                     TGRLDIWHDSMRMIAAHPWTGVGVRGFRYAYPRFAPAHDHFLVAEPCGVGEGACHAHQ
                     IVLEILTETGVAGLALWLAALAIAWRAWRRAGVAARERAWPVTLALGVMLFPLNTHLA
                     FYSAWWGLLFAWLLALWCAALHLASSARA"
BASE COUNT          491 a         1175 c         1053 g          425 t
ORIGIN      
        1 tcggccagat ctcggtttcc acgatcaggg ccagccgcgg gcgcaccgcc ttgaggaagc
       61 gattcaccgc gtaaggcagg tcgtagggca ggtagacgtg gaacacgctg tcgccgaaca
      121 gctgctgcac gcgcgcggta ccggtggggg tcaccgtggt caccaccagc ggcgcatccg
      181 ggtagtcgcg cttgagcgcc ttcaccagcg gctcggcggc attcacctcg acgaccgaca
      241 ccgcgtgcac ccacaggctg ccgctgacgc cggccggcgc ggaaaagaaa ccgaagcgct
      301 cggcccagcg ccagtagtac ggccgcgagc ggaacccgcg cagcgcgagc cgcagaacga
      361 tcagcggcgt cgccaggtac atcgccaggg tgtagagaaa gcgcaacgag gaactccgca
      421 agccgcacac gagtatacgg gagccgccac gccactccgg ccaccgtgca cgcgtccact
      481 acaatgcggc caatgcccgg ttcccgtcgc ccccgtttcc agcgtgcgct gctggctccg
      541 caccaatggc cagcgtggct cggcgtcggc gccacctggt tgctggcgcg tctgccgtac
      601 cgcgcgctga tgcgcgtcgg ccgtgtgctc ggcgccctgg cctgccgcat cccctcaccg
      661 cgccggcgca ttgccgccac caacatccgc ctgtgttttc ccgggctgga tgcgacggcg
      721 caggcggcgc tggtcgacgc ccacctgcgc gacatcggcc tgatgctgac cgagttcgcg
      781 ctcggctggc tcggttcgaa gcgcgcgatc gcgcgggtgc cggtcaccct cgaagggctt
      841 gagcacctcg ccaccgcccg cgcgcagaag cgcggcgtgc tgctggtcgg cgggcatttc
      901 tcgcacctgg aactgtgcgc gcggctggtg tcgcagcgca tcggcatcgc cggcatgtac
      961 cgcaagatgg attcggcggt gttcgaatgg atcgtgctgc gcgcgcggct cgactacgcc
     1021 gacgcgatgt tcgacaagga cgacatccgc ggcacggtga aatacctgcg cgccggcggc
     1081 acgctgtggt atgcgcccga ccaggacatg cgcagcaagg acaatgtgtt cgtgccgttc
     1141 tttggcgtac cggcggcgac gatcaccgcc acccatcacc tggcgcgcat gtcgggggca
     1201 ttggtgatcc cgttcttcca ccgccgcctg ccgcacggcc aaggctatgc gttgcggctt
     1261 ggcgccccgc tggacgactt tcccggcccc gacgccaccg ccgacaccgc ccgcatcaac
     1321 gcctgcatcg aggcgatggt gcgcgaggcg cccgagcaat acctgtgggt gcacaagcgc
     1381 ttcaagaccc ggcccgccgg cgccccggcc atctactgac gcgaaagctg gcgaaaaggt
     1441 gacggcgcca gcatgcgcgt cctcgtcccc tcgataccac gatgcggcac ttcctcgaat
     1501 cgatgcagga tcgcaccgat tggcgcggct caccggccac ccgcggtttc tatgcgttga
     1561 agtacgccgt gcgcagcctg tactggcgcg ggttgcacgc ggcctggctc gcgttcatct
     1621 acgacgaccc gcgcatgcgc gcgatgctgg cgcacgatcc gcgactggtc gagcgccccc
     1681 agcacgcata catcagccgc gggctggata ccgtcgccgg ctacgcgatc atccgcagcc
     1741 actacgggtt cgtgctcgcg cgctttcccg gcgacgtcgt gcgccggatc tatctcgccg
     1801 gccgtgcgcc ggtcggtacg ctggtgctga aggacggcag cacgatcggc atcgagttgc
     1861 gccgccccac cgggcgcggc cgcgagggcg agctggcgct gtacctggtg gatgccgccg
     1921 accgcgcgct gtcctcgatc atcttcacca tcgccgacga cggacgccgc ctgctgctcg
     1981 gctgcctgca gggcgccgcg cacgaactgg gccgcgacgc ggtgcgcgac ctgacccgcc
     2041 agtgccacgg cctgcgcccg aagaacctgc tgctgtcgat gctgctcggc ctcggcgcgg
     2101 cgatcggcac cgagcgcgtg ttcggcgtcg gcaatgcggc acatccgttc gccgatcatc
     2161 ccggcaagat caaggccgac tacgacggct tctggctcga atgcggcggc gtcgccagcc
     2221 gcgacggctt ctacgaattg ccgccgcgcg agccggtgcg cgatatcgcc acggtcgaca
     2281 gcaagcaccg cagcgccttt cgccggcgcg aggcgctgcg cgcgctggcg tgcgcgcagc
     2341 tgctggatgc gctcgcgttg tcgctgccgc tcgcccgcgc cagttgacgc cgccggggcc
     2401 tcaggcgcgc gccgacgacg cgaggtgcag tgccgcgcac cacagcgcaa gcaaccaggc
     2461 gaacagcagt ccccaccagg ccgaataaaa ggccaggtgg gtgttgagcg gaaacagcat
     2521 cacgccgagc gccagcgtca ccggccacgc gcgctcgcgt gcggcgacgc cggcgcgacg
     2581 ccacgcccgc cacgcgatgg cgagcgccgc cagccacagc gccagccccg ccacgccggt
     2641 ctcggtcagg atctccagca cgatctggtg cgcgtggcac gcgccctcgc cgacgccgca
     2701 cggctcggcc acgaggaaat gatcgtgcgc cggcgcaaac cgcggatacg cgtagcggaa
     2761 tccgcgcacg ccgacaccgg tccacgggtg cgccgcgatc atccgcatgc tgtcgtgcca
     2821 gatgtcgagc cggccggtga gcgcggtgtc caggccgcta cgggtaccct gcaacgcatc
     2881 cagcgtgcgc gccatgcgcg cctcgaagcg cgtcgaggtc tgccacgcga cggcgccggc
     2941 cagcacgacc accgccgccg cgacggcaag gcacgccgca aaccgtcgcc atgaccgcgt
     3001 ggcacgccac gcgcaggcca gggccaccag gccgtagcac agccacgcgg cgcgcgaccc
     3061 ggcaagcagc accggaccga gcatcagcag aaaggcggcc accaggccgc gccaccccca
     3121 gcgctgctgc gccgcccaca gcgc
//
LOCUS       DASSVL010000587         5570 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_323520, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000587 DASSVL010000000
VERSION     DASSVL010000587.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 5570)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5570)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5570
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_323520"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            33..1616
                     /locus_tag="VFM52_10195"
     CDS             33..1616
                     /locus_tag="VFM52_10195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008434303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase-fold protein"
                     /protein_id="HET8765579.1"
                     /translation="MARDATPVAPAHRFFHVQLGGAATQPVSGRLLLFAEDAASAEAD
                     AKQHGGDGKVTAVNTSPFFPTKTAVAAREVSRWLPQQVVDIDADHTAFPQGWSSLPPG
                     DYYVQAVLDVHHDYNYGGRDAGDLVGPVVKVHLPTANIPRLELDRVLQARDPWRLGAR
                     TDQATRDAVPAARAHARDIDFASPALSAFWGRPVAMRGRVLLPPGYDANAKTTYPTVY
                     YTQGFGGSNDRVVGTLVGVYAAMAKGEMPPMIWVFLDESSPTGTHEFADSVNNGPWGT
                     ALTTELIPQLEKTYRMDAKPNGRFLQGHSSGGWATLWLETRYPKIFGGTWSTSPDPSD
                     FHDFTGVDLYAPNANVYTRPDGTPYPLVRDHGKVLATFRQFAQLERVFGPYGGQLASF
                     EWVFSPKGKDGRPQPMFNRDTGAVDPAVVAYWREHYDIAYRLQRHWPALKPDLDGRIH
                     LYVGTADTFYLDGAAHKLKAVLDGLGAKSDVRFIPDRTHFDLYRIGDDRQGLLKDITW
                     QMYAVARPHSTLRAPRAAP"
     gene            complement(1660..3612)
                     /locus_tag="VFM52_10200"
     CDS             complement(1660..3612)
                     /locus_tag="VFM52_10200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015447625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c/FTR1 family iron permease"
                     /protein_id="HET8765580.1"
                     /translation="MIVTRIYTPITRVLAFLLLAASVAGTPALAQDVATTVPQTWQML
                     DYLATDYAGAVQDGKVVSTSEYAEMREFSATAAKRIASLPAGPATAALNRDADALVAA
                     VDAKAAPEAIAAQAHALAAGLLKAYPVPTAPEHTPDLARGAALYQSTCAACHGATGRG
                     DGPAGKALDPPPIAFTDQARADQRSALSLFEVISQGVEGTSMASYAKQLSREERWDLA
                     YYVGTLAYTKEQATGAQAWQHDDAARAQVADLKELSQARVTQLAPALGTDTARAIVGY
                     LRAHPDAMQQALSGVPLARGRVAASLAAYRAGNAGEATALALSAYLDGIEPVEPQLNG
                     RDAALRSRIETAMGAYRTALARHAPATEITNQAKTIDVLLAQAQDVLSESNDPAATFL
                     GAFTILVREGLEALLVVVALLAFLRKAERVRAIRYVHAGWVLALVAGGITWAIARYFI
                     TISGAGRELTEGLSSLFAALVLLSVGLWMHQKSIGGRWQAYLKTKMTAAVEHGSAWFL
                     FGLAFISVYREVFETILFYAALWNEGQEIWIVAGILGGAVVLALIAWTLLRTSRRLPI
                     GTFFSASSFLIAILAFVLTGKGVAALQEAGWLGVTVAPVPRIELLGIFPTWQSVSAQL
                     AILVLLVAGFTFNTLHGRKAAVAAHA"
     gene            complement(3741..>5570)
                     /locus_tag="VFM52_10205"
     CDS             complement(3741..>5570)
                     /locus_tag="VFM52_10205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008217174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel domain-containing
                     protein"
                     /protein_id="HET8765581.1"
                     /translation="WGSAWQAAWQPPNRRPLLLCLIGAALLLIGGRGTLARLWQRIAL
                     RFLPDGRLRRSATAAVMALVTMLVLGLVAQLVHQAVNWGDALDDDLDAMASGAVRVVS
                     FAALMAGLGSAMLAAKHPSWRLLPLADDAARRLRRYPWYLGGAALLVGGTERIVRSIG
                     WSLPATVLLHALLALLVSGLIGTLLLRLRHARHRREAESGADVHRSIWVGAASVAATL
                     GVATCWVAVFTGFIALAFFIAVQMLWIGLIAAGVYLLAELVRDVFEALLSPHGRSGQR
                     LQASFDLDAQALAQAAMVLTGVTRVLLALAALALVLAPFDASPSQLAQPTLQRFSGLK
                     LGQLTIEPGTVLSAIAVFVVGLVLLRMFKRWLGDSLLPTTHMDAGMRESVVTLLGYLG
                     AVLVFALALAALNVSLQSIAWIASALSVGIGFGLQAIVQNFISGLILLMERPVKVGDW
                     VSLSSDVEGDIRRINVRATEIQLWDRSTVIVPNSQLITQNVRNVTLGGALGRVRFLLP
                     LPLDTDPERVRTIMLDALTSHPATLATPAPVVRLSKVETSAMSFVATAYVRSPREADS
                     AQSDILFDVLARLRAANLPLSSSQSLVVRTVGNPPPVAPAPAG"
BASE COUNT          870 a         1978 c         1964 g          758 t
ORIGIN      
        1 tgggctgcgg cctgttgttg tccgccggcg cattggcgcg cgacgccacg cccgtcgcgc
       61 ctgcacaccg cttcttccac gtgcaactgg gcggtgcggc aacgcagccg gtttccgggc
      121 gcctgctgct gtttgccgag gatgcggcat cggccgaagc cgacgccaag cagcatggcg
      181 gcgacggcaa ggtgaccgcg gtgaacacca gcccgttctt tccgaccaag accgccgtgg
      241 ccgcgcgcga ggtgagccgg tggctgccgc agcaggtggt cgacatcgac gccgaccaca
      301 ccgctttccc gcagggctgg tcgagcctgc cgccgggcga ctactacgtg caggccgtgc
      361 tcgacgtgca ccatgactac aactacggcg gccgcgacgc cggcgacctg gtcggcccgg
      421 tggtgaaggt gcacctgccc accgcgaaca ttccccgcct cgaactcgac cgcgtactgc
      481 aggcgcgcga cccgtggcgg ctcggcgcgc gcaccgacca ggccacgcgc gatgccgtgc
      541 cggcggcgcg ggcgcacgcg cgtgacatcg acttcgccag cccggcgctg agcgcgttct
      601 ggggccggcc ggtcgccatg cgcggccgcg tgctgctgcc gccgggctac gacgccaacg
      661 ccaagaccac gtatcccacc gtgtattaca cgcagggttt cggcggcagc aacgatcgcg
      721 tggtcggcac cctggtcggc gtctatgcgg ccatggccaa gggcgagatg ccgccgatga
      781 tctgggtgtt cctggacgaa tccagcccca ccggcacgca tgagttcgcc gactcggtga
      841 acaacggccc gtggggcacg gcgctcacca ccgagctgat cccgcagctg gaaaagacct
      901 accgcatgga tgcgaagccg aacggccgct tcctgcaggg ccactcctcc ggcggctggg
      961 ccacgctgtg gctggagacg cgctacccga agatcttcgg tggcacctgg tccacctcgc
     1021 ccgacccgag cgacttccac gacttcaccg gggtggacct gtacgcgccc aatgccaacg
     1081 tctacaccag gccggacggc acgccgtacc cgctggtgcg cgaccacggc aaggtgctgg
     1141 cgacgttccg gcagttcgcc cagctcgaac gcgtgttcgg gccgtacggc gggcagctgg
     1201 cctcgttcga gtgggtgttc tcgcccaagg gcaaggatgg ccggccgcag ccgatgttca
     1261 accgcgacac cggcgcggtc gatccggcgg tggtggcgta ctggcgcgag cactacgaca
     1321 tcgcctatcg cctgcagcgg cactggccgg cgctgaaacc ggatctcgac ggcaggatcc
     1381 acctctacgt gggcaccgcc gacacgttct atctcgatgg cgccgcgcac aagctcaagg
     1441 cggtgctgga cgggctgggc gcgaagtccg acgtccgctt cattccggac cgcacccact
     1501 tcgacctgta tcgcatcggc gacgaccgcc agggcctgct caaggacatc acctggcaga
     1561 tgtacgcggt ggcgcggccg cattcgacgc tcagggcgcc gcgggcagcg ccatgacact
     1621 gcggcggtgg ccgggcatcg gcccgaccac caccgcgcat caggcgtgcg ctgcgacggc
     1681 ggccttcctg ccgtgcagcg tattgaaggt gaagccggcg accagcagca ccaggatggc
     1741 gagctgcgcg gacaccgact gccaggtcgg gaagatgccg agcagttcga tgcgcggcac
     1801 cggcgccacg gtgacaccga gccagccggc ttcctgcagc gccgcgacgc ccttgccggt
     1861 gagcacgaag gcgaggatcg cgatcaggaa cgagctggcc gagaagaacg tgccgatcgg
     1921 cagccggcgg ctggtgcgca gcagcgtcca cgcgatcagc gccagcacca cggcgccgcc
     1981 gaggatgccg gcgacgatcc agatttcctg cccttcgttc cacagcgcgg cgtagaacag
     2041 gatggtctcg aacacctcgc ggtacaccga gatgaaggcc agcccgaaca ggaaccacgc
     2101 cgaaccgtgt tcgacggcgg cggtcatctt ggtcttgaga taggcctgcc agcgcccgcc
     2161 gatgctcttc tggtgcatcc acaacccgac gctcagcagc accagcgcgg caaacagcga
     2221 ggacagcccc tcggtcagct cgcgcccggc gccgctgatg gtgatgaagt agcgcgcgat
     2281 ggcccaggtg atgccgccgg cgaccagcgc cagcacccag ccggcatgca cgtagcggat
     2341 cgcgcgcacc cgctcggcct tgcgcaggaa ggcgagcagg gcgacgacga cgagcagcgc
     2401 ttccagccct tcgcgcacga ggatggtgaa cgcgccgagg aaggtggcgg ccggatcgtt
     2461 cgattcgctc agcacgtcct gggcctgggc cagcagcacg tcgatggttt tcgcctggtt
     2521 ggtgatttcg gtcgccggtg cgtggcgtgc gagcgcggtg cgataggcgc ccatcgcagt
     2581 ctcgatccgg gagcgcagcg cggcatcgcg gccgttcaat tgcggttcga ccggctcgat
     2641 gccgtcgagg taggcagaca gcgccagcgc cgtcgcctcg ccggcattgc cagcccggta
     2701 cgcagccagg ctggccgcca cgcggccgcg cgcgagcggc acgccggaaa gcgcctgctg
     2761 catggcgtcg gggtgcgcgc gcaggtagcc gacgatggcg cgcgcggtgt cggtgccgag
     2821 cgccggcgcg agctgggtca cgcgcgcctg cgacagctcc ttgaggtcgg cgacctgcgc
     2881 gcgcgccgcg tcgtcgtgct gccatgcctg cgcgccagtg gcctgctcct tcgtgtatgc
     2941 gagggtgccg acgtaatagg cgagatccca gcgctcttcg cgcgaaagct gcttggcgta
     3001 gctcgccatc gaggtgcctt cgacgccctg gctgatcacc tcgaacaacg acagtgcgct
     3061 gcgctggtcg gcgcgtgcct ggtcggtgaa cgcgatcggc ggcgggtcga gcgccttgcc
     3121 ggcggggccg tcgccgcggc ctgtcgcgcc gtggcaggcg gcgcaggtgg actggtagag
     3181 cgccgcaccg cgcgcaaggt cgggggtgtg ctccggcgcg gtcggcaccg ggtaggcctt
     3241 gagcaggccg gcggccagcg cgtgcgcctg ggcggcgatc gcctccggcg cggccttggc
     3301 gtccaccgcg gcaaccagcg cgtcggcgtc gcggttcagc gccgccgtgg ccgggcccgc
     3361 cggcagcgag gcgatgcgct ttgcggccgt ggccgaaaac tcgcgcattt ccgcgtattc
     3421 ggaggtgctg acgaccttgc cgtcctgcac cgcaccggcg tagtcggtgg cgaggtaatc
     3481 cagcatctgc caggtttgcg gcaccgtggt cgccacgtcc tgggccaggg ccggcgtgcc
     3541 agccacgctt gcggcaagca gcaggaacgc gagcacgcgt gtgatcgggg tgtaaatgcg
     3601 agtcactatc attgctagat gatagcgagc aatccgccgc gcggcgagag gttttgcaaa
     3661 ccaggtttcc gcgacggcgc ggtggccgtt gcgcccgtgg gccgtagccg tcacggcccc
     3721 gccggcgcgg caccggcggt tcagcctgcc ggtgcggggg ccaccggcgg cgggttgccc
     3781 accgtacgca ccaccaggct ctgcgaggag ctgagcggca ggttcgccgc gcgcaggcgc
     3841 gcgagcacgt cgaacaggat gtcgctctgc gcgctgtccg cctcgcgcgg gctgcgcacg
     3901 taggcggtcg caacgaagct catggcgctg gtctccacct tgctcaagcg caccaccggc
     3961 gccggcgtgg cgagcgtggc cgggtggctg gtgagcgcgt cgagcatgat cgtgcgcacg
     4021 cgttcggggt cggtatccag cggcagcggc agcaggaagc gcacccggcc gagcgcgccg
     4081 ccgagcgtca cgttgcgcac gttctgggtg atcagctgcg aattcggcac gatcacggtg
     4141 gagcggtccc acagctggat ttcggtcgcg cgcacgttga tccggcggat gtcgccctcg
     4201 acgtcgctcg acaggctgac ccagtcgccg accttcaccg gtcgctccat caacaggatc
     4261 aggccggaaa tgaagttctg cacgatcgcc tgcaggccga agccgatgcc caccgacaag
     4321 gcgctggcga tccacgcgat gctctgcagg ctgacgttga gcgcggccag cgccagcgcg
     4381 aacaccagca ccgcgccgag ataaccgagc agggtcacca ccgactcgcg catgccggcg
     4441 tccatgtgcg tggtgggcag caggctgtcg ccgagccagc gcttgaacat gcgcagcagc
     4501 acgaggccga ccacgaacac cgcgatcgcg ctcagcaccg taccgggctc gatcgtgagc
     4561 tggccgagtt tcagcccgct gaagcgctgc agcgtgggtt gcgccagctg gctggggctg
     4621 gcgtcgaatg gcgccagcac cagcgccagc gcggccagcg ccagcagcac gcgggtcacg
     4681 ccggtgagca ccatcgccgc ctgggccagc gcctgcgcat cgagatcgaa gctcgcctgc
     4741 agccgctggc cgctgcggcc gtggggcgac agcaacgcct cgaacacgtc gcgcaccagt
     4801 tccgccagca ggtacacgcc ggccgcgatc agcccgatcc acagcatctg cacggcgatg
     4861 aaaaaggcca gcgcaatgaa gccggtgaac accgccaccc agcacgtcgc cacgcccagc
     4921 gtggccgcga cgctggcggc accgacccag atcgagcggt gcacgtcggc gccgctctcg
     4981 gcctcgcgcc ggtgccgcgc atggcgcagg cgcagcagca gggtgccgat cagtccactg
     5041 accagcagcg ccagcaatgc gtgcagcaac accgtggcgg gcaggctcca gccgatgctg
     5101 cgcacgatgc gttcggtgcc gccgaccagc agcgccgcac cgccgaggta ccacgggtag
     5161 cggcgcaggc gccgcgccgc atcgtcggcc agcggcagca ggcgccacga cggatgtttc
     5221 gcggccagca tcgcgctgcc gagtccggcc atcagggcgg caaagctgac cacgcgcacc
     5281 gcgccgctgg ccatcgcatc caggtcgtca tcgagcgcgt cgccccagtt caccgcctgg
     5341 tgcaccagct gcgccaccag gccgagcacc agcatggtga ccagcgccat caccgccgcg
     5401 gtggcgctgc ggcgcaggcg gccatccggc aggaaccgca acgcgatgcg ctgccacagc
     5461 cgcgccagcg tcccgcggcc gccgatgagg agcagcgccg caccgatcag gcacagcagc
     5521 agggggcgcc ggttcggcgg ctgccacgcc gcttgccagg cgctgcccca
//
LOCUS       DASSVL010000588         2537 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1087340,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000588 DASSVL010000000
VERSION     DASSVL010000588.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2537)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2537)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2537
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1087340"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..442
                     /locus_tag="VFM52_10210"
     CDS             <1..442
                     /locus_tag="VFM52_10210"
                     /inference="COORDINATES: protein motif:HMM:NF018597.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="extensin family protein"
                     /protein_id="HET8765582.1"
                     /translation="DTLSNHSFGDAIDVVGVRWRSGGGSREVVAHSFRDAGERQVLRC
                     VNACLRLSFATVIDYHRADHQDHFHCDMNRGGGRILTGATTVVFVQEALNLLQGAKLA
                     ESGSFDAATQAALARFSGRSVGDLKNRATLSAVLDALFQRMALT"
     gene            571..1773
                     /locus_tag="VFM52_10215"
     CDS             571..1773
                     /locus_tag="VFM52_10215"
                     /inference="COORDINATES: protein motif:HMM:NF033542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HET8765583.1"
                     /translation="MTQSNDLSRSLVVLEQDTTLIAVVELSQSTWLTSALVPGLSRDP
                     VKKLEGPRQGRGKKRRAPVAEDLLAQLQRWRDEALKAGRRITRVAVAFEAGRDGFWLA
                     RCLQRQGVEAYVIHPSSVPVPRQHRRAKSDRLDLQLLMRCFLGWLRGEKKHCQMCAIP
                     TLEEEDARRPGRERETLVVEVRRTVNRMKSRLAQFGVQGFKPTLRRAAAKLAALRTPE
                     GEPLPANTRAELERLMQRLLLLRAQIKEIEAARLERLEQAPEQHAPVLQLARAEGLGV
                     ETADLLVREVFSRPLRDERAVGRYGGLTGAPDQSGARCREQGLARSGNARVKRSMIQL
                     AWRFLQFQPDLALVRWYRERTAKAARGVRKQMIVALARKLLVALWRMAGTGEVPEGLR
                     LRPATIAV"
BASE COUNT          374 a          865 c          950 g          348 t
ORIGIN      
        1 cgacacgctg agcaaccact ccttcggcga tgcgatcgac gtggtcgggg tgcgttggcg
       61 cagcggcggc ggcagccgcg aggtggtggc gcacagcttc cgcgatgccg gcgagcggca
      121 ggtcctgcgc tgcgtcaacg cctgcctgcg gctgagcttc gccacggtga tcgactatca
      181 ccgcgccgac catcaggacc atttccactg cgacatgaac cgcggcggcg gccgcatcct
      241 caccggcgcc accaccgtgg tgttcgtgca ggaggcgctg aacctgttgc agggcgcgaa
      301 gctcgcggag tccggcagct tcgatgccgc cacccaggcg gcgctcgccc gcttctccgg
      361 tcgcagcgtc ggcgatctga agaaccgggc gacgctcagc gccgtgctgg acgcgctgtt
      421 ccagcgcatg gcgctgacct agagcgtgat gcgacgagtt ggaatcgcgt caaaccctct
      481 ccgccgcgat agcgggggag agatgctatg gggcggacgg cgagggctgg tgcaccatcg
      541 ctgttgcgaa gcaccaatgg agcacgcccc atgacccagt cgaatgatct gagccggtcc
      601 ctcgtcgtcc tggaacagga tacgacgctg attgccgtag tcgagctgag ccagtcgacc
      661 tggctgacat cggcgctggt gccgggtttg tcgcgcgacc cggtgaagaa gctggagggg
      721 ccgcgccagg gccgcggcaa gaagcgtcga gcgccggtgg cggaagatct gctggcgcag
      781 ctgcagcgct ggcgcgacga ggcgctgaag gcgggccgcc ggatcacgcg cgtcgcggtg
      841 gcgttcgagg ccggccggga cggcttctgg ctggcgcgct gtctgcagcg ccagggggtg
      901 gaggcgtacg tgatccaccc gagcagcgtg ccggtgccgc gccagcaccg gcgggcgaag
      961 tcggaccggc tggacctgca gctgctgatg cgctgcttcc tgggctggct gcgcggcgag
     1021 aagaagcact gccagatgtg cgcgatcccg acgctggagg aggaggatgc gcggcgtccc
     1081 gggcgggagc gcgagacgct ggtggtggag gtgcgccgca cggtcaaccg gatgaagagc
     1141 cggctggcgc agttcggcgt gcaggggttc aagccgacgc tgcggcgcgc cgcggccaag
     1201 ctggcggcgc tgcggacgcc ggaaggcgag ccgttgccgg cgaacacccg ggccgagctc
     1261 gagcggctga tgcagcggct tctgctgctg cgggcgcaga tcaaggagat cgaggcagcc
     1321 cggctggagc ggctcgagca ggcgccggag cagcatgccc cggtgctgca gctggcccgg
     1381 gccgaggggc tcggggtgga gaccgccgac ctgctggtgc gcgaggtgtt ctcccggccg
     1441 ttgcgcgacg agcgcgcggt cgggcgatac ggcgggctca ccggggcgcc ggaccagagc
     1501 ggggcgcgct gccgcgagca gggcctggcg cgcagcggca acgcccgggt caagcgcagc
     1561 atgatccagc tggcctggcg gttcctgcag ttccagcccg acctggccct ggtccggtgg
     1621 taccgcgaac gcacggccaa ggcggcgcgc ggcgtgcgca agcagatgat cgtggcgctg
     1681 gcgcgcaagc tcctggtggc gctgtggcgc atggccggca ccggggaggt gcccgagggc
     1741 ctccggctgc ggccggcaac gatcgccgtg tagcgccggg cgatgcttgc cagcaaaccg
     1801 gttcggcaag cccaggcgac agccgggccc agggccagcc gatgacgatc cgaggtggcg
     1861 gcaccccgca gcacacccat ggcttcgacg ccgcgggaga gattgggtcc gccgccccgg
     1921 agcttcgccg ccgatgcgca agtccgcatc ttggtcgggc cccaggcccg acaccgcaga
     1981 caaggctgcg gcgcgatgag cccgctcatc cgccgcccca cgcgagctcc ccttggatcg
     2041 ccgcttgccc gccccgcccg agccaccgcc atcggcgcgc gccgctgcgc cagattcttg
     2101 acgatcgctc cgcggcgcgc gccgatggcc gcgacgtccc ggcccgatat ccgccacatc
     2161 accgaggtca ccggccttgc accacaatcg aggcttgaca ctaaatgccc catacaaggg
     2221 tggtcgccgc gcagcggcga ccgggtgagg tgggaggaaa acggttggag tgtttccccg
     2281 aaccgatttc ctcccacctc accctcccgc gctgacgcgc gggcccctcc tgttgcggcg
     2341 ccatttggcg ccgcaagatt ggcctctccc ccgctttcgc agcggagagg ggtggaagcg
     2401 cggatgcagc agagttcatc gcacggctac tccgccggct tcgggatctc cagctccggc
     2461 cgcggcagcg cgatcatcgc tgccggcggc cgcgggtgca gcagcaggtc gagcacccgc
     2521 gtgagcgtcg ccttgag
//
LOCUS       DASSVL010000589         3925 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_691448, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000589 DASSVL010000000
VERSION     DASSVL010000589.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3925)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3925)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3925
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_691448"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..537)
                     /locus_tag="VFM52_10220"
     CDS             complement(<1..537)
                     /locus_tag="VFM52_10220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008437407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HET8765584.1"
                     /translation="MSTLPRWCVVIPCLDEEAAIRGVVEAVLAQGAPVIVVDDGSTDR
                     TPNILATLPVTVLRHATRRGKGQALRHGFREALRQGYAAVLTMDGDGQHSAADIPRLL
                     AAAAAHPGQIVIGARLLDKAQQPKARRRANAVADWGISWGCGQPVADTQSGQRWYPRA
                     ALDLVDLPAQDFVFEAALL"
     gene            complement(534..1295)
                     /locus_tag="VFM52_10225"
     CDS             complement(534..1295)
                     /locus_tag="VFM52_10225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019465524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl synthase chain length factor"
                     /protein_id="HET8765585.1"
                     /translation="MTTLTGHVEGVGLWSPRATSFAALRAGDHESPATGQPPAARLPA
                     GERRRAPPSVRLAVEVAGQALAMSARDGAELACVFGSAHGDQAITDAMCATLARAPLE
                     VSPTRFHHSVHNAAAGYWTIATGCHAPSSAVAAGACTFGAALLEAAAQVRAEARPVLL
                     ACSDIAGCGPLQAMTGCTYAFGCALVLAPASTPATLATLRITPTPAAVPVPSAAGNPS
                     ASALPLLEHLAGAGGTCRVMAAPALALDVQVAVRA"
     gene            complement(1292..2476)
                     /locus_tag="VFM52_10230"
     CDS             complement(1292..2476)
                     /locus_tag="VFM52_10230"
                     /EC_number="2.3.1.179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019465523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase"
                     /protein_id="HET8765586.1"
                     /translation="MTPLAVSAFTATSALGGGLAAHVDALRADRSGLRPNDFGSLPHR
                     GWIGRVAGVEATTLPAPLADWDCRNHRLAWLGLQQDGFRARVAAARTRYGTARVALVV
                     GTSTASIGATEEAYRTLDADGGFPPGLRFAPLHAPDALSAFLRVALDLAGPCLTISTA
                     CSSSAKVFASAARLLALDLADAVVVGGVDSLCGNVLFGFNALELIAPDACRPFDAHRA
                     GLSLGEAAGFALLERTPAAPHAPRLLGYGEASDAWHMSAPHPEGVGAERALDAALASA
                     GLDAGQVDYVNLHGTASRQNDAVEAALIARRFPAHARASSTKGATGHTLGAAGALEAA
                     IALLAIAHDLVPGTVGTREPDPACTAAFAWHSEQRRVDVALSNSFGFGGNDACLVFGR
                     AP"
     gene            2853..3755
                     /gene="hemF"
                     /locus_tag="VFM52_10235"
     CDS             2853..3755
                     /gene="hemF"
                     /locus_tag="VFM52_10235"
                     /EC_number="1.3.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008437449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004109 - coproporphyrinogen oxidase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-dependent coproporphyrinogen oxidase"
                     /protein_id="HET8765587.1"
                     /translation="MSEQADRSEAFLRELQDRICGELERLDGGARFVTDEWTRPAGGG
                     GRTRVLRDGALFEQAGVNFSRVSGHQLPPSATQHRPELAGGSFVATGVSLVLHPKNPY
                     VPTTHANVRYFEASKDGVEPVWWFGGGFDLTPFYPFDEDVVHWHTVARDLCAPFGADV
                     YARYKQWCDEYFLLKHRQETRGVGGLFYDDLNEGGFERCFDFTRAVGQGFLDAYLPIA
                     ARRKDTPYGEREREFQLYRRGRYVEFNLVYDRGTLFGLQSGGRTESILMSLPPRVRFE
                     YAYAPEAGSPEARLAEYLQPREWV"
BASE COUNT          529 a         1424 c         1441 g          531 t
ORIGIN      
        1 cagcagcgcc gcctcgaaca cgaagtcctg cgccggcagg tcgaccaggt cgagcgccgc
       61 ccgtggatac cagcgttgcc cgctttgcgt gtcggccacc ggctgcccgc agccccagga
      121 aatgccccag tcggccaccg cgttcgcccg gcggcgcgcc ttgggctgct gcgccttgtc
      181 cagcaggcgc gcgccgatca cgatctggcc ggggtgcgcc gcggcggcgg cgagcaggcg
      241 cgggatatcc gccgcgctgt gctggccgtc gccgtccatc gtcagcaccg ctgcgtagcc
      301 ctggcgcagt gcctcgcgga aaccgtggcg cagcgcctgg cccttgccgc gccgcgtcgc
      361 gtggcgcagc acggtcaccg gcagcgtggc gaggatgttc ggcgtgcggt cggtcgagcc
      421 gtcgtcgacc acgatgaccg gcgcgccctg cgccagcacc gcttcgacca cgccgcggat
      481 cgccgcctcc tcgtcgaggc aggggatcac gacgcaccag cgcggcagcg tgctcatgcg
      541 cgcaccgcca cctgcacgtc gagcgccagc gccggcgccg ccatcacgcg gcacgtaccg
      601 ccggcgccgg cgaggtgttc cagcagtggc agcgcgctgg cgctcggatt gccggcggcg
      661 gacggcaccg gcaccgccgc tggcgtcggc gtgatccgca acgtcgcgag ggttgccggc
      721 gtcgatgccg gggcgagcac cagcgcgcag ccgaacgcgt aggtgcagcc agtcatcgcc
      781 tgcagcgggc cgcagccggc gatgtcgctg cacgccagca gcaccggccg cgcttcggcg
      841 cgcacctgcg ccgcggcttc cagcaacgcc gcgccgaacg tgcacgcgcc ggccgccacc
      901 gcgctcgacg gcgcatggca gccggtcgcg atcgtccagt agccggccgc cgcgttgtgc
      961 accgagtggt ggaagcgggt gggcgagact tccagcggcg cccgcgcgag ggtggcgcac
     1021 atcgcgtcgg tgatcgcctg gtcgccgtgc gcggagccga acacgcaggc cagctccgcg
     1081 ccgtcgcgcg cgctcatcgc cagcgcctgc ccggccactt ccaccgccag ccgcacgctc
     1141 ggcggcgcgc gccgccgctc gccggccggc agccgtgccg ccgggggttg cccggttgcc
     1201 ggcgactcgt gatcgccggc acgcagcgcg gcaaaactgg tggcgcgtgg cgaccacagg
     1261 ccgacgccct cgacgtgccc ggtgagcgtc gtcatggtgc gcgtccgaac acgaggcagg
     1321 cgtcgttgcc gccgaagccg aaggagttgc tgagcgcgac gtcgacgcgg cgctgctcgc
     1381 tgtgccacgc gaacgcggcg gtgcacgcgg ggtcgggttc gcgggtgccg acggtgccgg
     1441 gcaccaggtc gtgcgcgatc gcgagcagcg cgatcgcggc ctccagtgcg ccggccgcgc
     1501 cgagcgtgtg gccggtcgcg cccttggtcg agctggcgcg tgcgtgtgcg gggaaccggc
     1561 gcgcgatcaa cgcggcctcg accgcgtcgt tctgccggct cgcggtgccg tgcaggttga
     1621 cgtaatccac ctggccggcg tcgaggccgg cgctggcgag cgcggcgtcg agcgcacgtt
     1681 ccgcgccgac gccttccggg tgcggcgccg acatgtgcca ggcgtcgctg gcctcgccgt
     1741 agccgagcag gcgcggcgcg tgcggcgcgg ccggcgtgcg ctcaagcagc gcgaagcccg
     1801 ccgcctcgcc gagcgacagc ccggcgcggt gcgcgtcgaa cggccggcac gcgtcgggcg
     1861 cgatgagttc gagcgcgttg aagccgaaca gcacattgcc gcacaggctg tccacgccgc
     1921 cgaccacgac ggcatcggcg agatccagcg cgagcagtcg cgccgcgctc gcgaacacct
     1981 tggcgctcga cgagcacgcg gtggaaatcg tgaggcacgg gccggcgaga tccagtgcca
     2041 cgcgcaggaa ggcgctcagc gcgtcgggtg cgtgtagcgg cgcgaagcgc agcccgggtg
     2101 gaaacccgcc atccgcatcc agcgtgcggt aggcctcctc ggtggcgccg atgctggcgg
     2161 tcgaggtgcc gaccaccagc gcgacgcggg cggtgccgta acgcgtgcgc gcggcggcga
     2221 cgcgcgcacg gaaaccatcc tgctgcaggc cgagccaggc gagccggtgg ttgcggcaat
     2281 cccagtcggc gaggggcgcg ggcagcgtcg tcgcctccac gcccgcgacg cgcccgatcc
     2341 agccgcggtg cggcaggctg ccgaaatcgt tcggccgcaa tccgctgcga tccgcgcgca
     2401 gcgcgtcgac gtgcgcggca aggccgccgc cgagtgccga ggtggcggtg aaggcgctca
     2461 cggcgagcgg ggtcatcggg tctgccatcc gcaaagcgta cccagcgccc gctgtactga
     2521 ctaggagcct gggttgcgga aacattcgag gcgagagatt tgccgcacga gggcaggttg
     2581 gcgacagtcc gtcgccccat ggtggtgcta tggggcaaga cgcggcgcca agctgcaccg
     2641 cgcggcgagc ttcgcagccc ggatgatttc tgcggcccag gcttaggagt gcagggcgag
     2701 ccgcgcactg acccagcgca ggccggcgcg gcgtggcgcc acagtgccgc gcccggcgtc
     2761 cttgctaagc tcgcggcatt gcctccccac gcgtcgtaca gggccaccca ggcgcctgca
     2821 ccgccgcacc cacgactttc cggagtaccg acatgagcga gcaagccgac cgttccgaag
     2881 cgttcctgcg cgagttgcag gatcgcatct gcggcgaact cgagcgcctg gacggcggcg
     2941 cgcgcttcgt caccgacgag tggacgcgtc cggctggtgg cggcggccgc acccgcgtgc
     3001 tgcgcgatgg cgcgctgttc gagcaggccg gggtcaactt ctcgcgggtg tccggccacc
     3061 agctgccgcc gagcgccacc caacaccggc ccgagcttgc gggcggcagt ttcgtcgcca
     3121 ccggcgtctc gctggtgctg cacccgaaga acccctacgt gccgacgacg cacgccaacg
     3181 tgcgctattt cgaggccagc aaggatggcg tcgaaccggt gtggtggttc ggcggcggtt
     3241 tcgacctcac cccgttctac ccgttcgacg aggacgtcgt gcactggcac accgtcgccc
     3301 gcgacctgtg cgcgccgttc ggcgcggacg tctacgcgcg ctacaagcag tggtgcgacg
     3361 agtacttcct gctcaagcac cggcaggaga cgcgcggcgt cggtggcctg ttctacgacg
     3421 atttgaacga aggcggtttc gagcgctgct tcgacttcac ccgtgccgtg ggccaaggct
     3481 tcctcgacgc ctacctgccg attgccgcgc gccgcaagga cacgccctac ggcgagcgtg
     3541 aacgcgagtt ccagctctac cggcgcggcc gctacgtcga gttcaacctg gtctacgacc
     3601 gcggcaccct gttcggcctg cagtccggcg gccgcaccga atccatcctg atgagcctgc
     3661 cgccgcgcgt gcgcttcgaa tatgcctacg cgccggaagc cggatcgccg gaagcgcgct
     3721 tggccgagta cctgcagccg cgcgaatggg tgtaggcgcg gtatccgggt ggcttcgtgc
     3781 accccgcgct tgaagccggg gtaccgtgac ccacgcgagc ccacgttttg aagcccgccc
     3841 ttcaagggga gggctcgggt ggggttctgt ggttggcgtg gcatcagagc ggtttcgtcc
     3901 gcctggcggc ggccgagcta cttct
//
LOCUS       DASSVL010000590         2286 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_309964, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000590 DASSVL010000000
VERSION     DASSVL010000590.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2286)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2286)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2286
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_309964"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..502)
                     /locus_tag="VFM52_10240"
     CDS             complement(<1..502)
                     /locus_tag="VFM52_10240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008265780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HET8765588.1"
                     /translation="MTDKIILVTGASAGFGAAIAAKFAEHGWHVVACARRTARLQALV
                     KRFGADHVHACAFDIRDEAALRAALAALPEGFRDIDLLVNNAGLALGTAKAQDSDLAQ
                     WRQMIDTNVTALATMTHALLPGLIERRGAIVNISSISGSYPYRGGNVYGGTKAFVSQF
                     SLNLRAD"
     gene            complement(558..1193)
                     /locus_tag="VFM52_10245"
     CDS             complement(558..1193)
                     /locus_tag="VFM52_10245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007082560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SPOR domain-containing protein"
                     /protein_id="HET8765589.1"
                     /translation="MATRNNRQAVRNGRPAVPGWSLFVAGVVVGLIVMGVVAHRGLIP
                     SLRRNDQPQANPNAVAQPGSSAGIAASGGTSAAAASSQFSFYKVLPETEVVIPNAELS
                     AMAKAEQQKVAAANNASAAPAASATAAAGEGGGGYVLQVGAFPKSSDAEAMKAKLALQ
                     GFAAQVQAVSLDGQVWNRVRLGPFGSAAQLQSVQKQLASAGLPTGVALKEK"
     gene            complement(1234..>2286)
                     /locus_tag="VFM52_10250"
     CDS             complement(1234..>2286)
                     /locus_tag="VFM52_10250"
                     /EC_number="6.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019183971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004814 - arginine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006420 - arginyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arginine--tRNA ligase"
                     /protein_id="HET8765590.1"
                     /translation="AGERVTVEGHDVTGAGDPENLEAIRAFAVACLRHEQDLDLKAFG
                     VAFDVYFLESSLYRDAKVQQVVDRIAAEGHSYEADGALWLRSTEFGDDKDRVMRKSDG
                     TYTYFVPDVAYHLSKWERGYKRAITELGADHHGSLARVRAGLQALSVGIPKDWPEYVL
                     HQMVTVLKGGEEVKISKRAGSYVTLRDLIDMAGLDATRYFLIARKADSQLVFDVDLAR
                     AQTNDNPVYYIQYAHARVCSVERQLHERGAVFEQRAALQRLERLDSEPARAVMVALSR
                     FPETVALAADGREPHLLAQYLRDLAGAFHVWYNTEQFLVDDEDLRNARVALAYATRQV
                     LANGLGLLGVSAPESM"
BASE COUNT          356 a          796 c          756 g          378 t
ORIGIN      
        1 ggtcggcgcg caggttcagc gagaactgcg agacgaaggc cttggtgccg ccgtagacgt
       61 tgccgccgcg gtaggggtag ctgccggaga tcgagctgat gttgacgatg gcgccgcggc
      121 gctcgatcag ccccggcagc agcgcatgcg tcatcgtcgc cagcgcggtg acgttggtgt
      181 cgatcatctg ccgccactgc gccaagtcgg aatcctgggc cttggccgtg ccgagcgcga
      241 gaccggcgtt gttgaccaaa agatcgatgt cgcggaagcc ttcgggcaag gctgccaacg
      301 cagccctgag ggccgcctcg tcgcggatgt cgaacgcgca cgcgtggacg tggtcggcgc
      361 cgaagcgctt caccagcgcc tgcagccgcg ccgtgcgccg cgcgcaggcg acgacgtgcc
      421 agccgtgttc cgcgaacttc gcggcgatcg ccgccccgaa accggcggag gcgccggtga
      481 ccaggatgat tttgtcagtc atctgcgcat tgtagggcca agcgtgaccg cggcccagat
      541 cgcctgcacg caggctccta cttttccttc aatgcgacgc cggtcggcag gcccgcactc
      601 gccaattgct tctgcacact ctgcaactgc gccgccgatc cgaacgggcc gagccgcacg
      661 cggttccaga cctggccatc gagcgacacc gcctgcacct gcgcggcgaa accctgcaac
      721 gccagcttgg ccttcatcgc ttcggcatca ctcgacttcg ggaacgcgcc gacctgcagc
      781 acatagccac cgcccccctc accggcggcc gcggtcgcac ttgcggccgg cgccgcgctg
      841 gcgttgttgg cggcggcgac cttctgctgc tcggccttgg ccatcgccga caattcggcg
      901 ttcgggatca cgacttccgt ctcgggcagc accttgtaaa aactgaactg cgagcttgcg
      961 gccgcggcgc tggtaccacc gctggccgcg atgccggccg agctgccggg ctgggccacc
     1021 gcgttggggt tggcctgtgg ctggtcgttg cggcgcaggc tggggatgag cccccggtgc
     1081 gcgacgaccc ccatcacgat caggccgacg acgacgcccg ccacgaacag gctccagccg
     1141 ggaaccgccg ggcgaccatt gcgtaccgct tgccgattat tgcgcgttgc cacttgagtc
     1201 ctcttgcagc ccttgtgcgg gccgcgtcca ccactacatc gattcgggtg ccgatacgcc
     1261 aagcaggccg aggccgttgg ccagcacctg ccgcgtcgca tacgccagcg ccacgcgcgc
     1321 gttgcgcagg tcttcgtcat cgaccaggaa ctgctcggtg ttgtaccaga cgtggaacgc
     1381 accggccagg tcgcgcaggt attgtgccag cagatgcggc tcgcgaccgt cggccgccag
     1441 cgccacggtt tccgggaacc gcgacagggc gaccatcacc gcgcgtgcgg gttcgctgtc
     1501 caggcgttcg aggcgctgca gcgcggcgcg ctgctcgaac accgcgccgc gttcgtgcaa
     1561 ctggcgctcg acgctgcaga cccgcgcgtg ggcgtactgg atgtagtaca ccggattgtc
     1621 gttggtctgc gcacgcgcga ggtcaacgtc gaataccagc tgcgagtcgg ccttgcgcgc
     1681 gatcaggaaa tagcgcgtgg catcgaggcc cgccatgtcg atgaggtcgc gcagggtgac
     1741 gtagctgccg gcgcgcttgg aaatctttac ttcctcgccg cccttgagca ccgtcaccat
     1801 ctggtgcagg acgtactcgg gccagtcctt cggaatgccg acgctgagcg cctgcaaccc
     1861 cgcgcgcacg cgcgccagcg aaccgtggtg gtcggcccca agttcggtga tcgcgcgctt
     1921 gtagccgcgc tcccacttgg aaaggtgata ggcgacgtcg ggcacgaaat aggtataagt
     1981 gccgtccgac ttccgcatca cgcggtcctt gtcgtcgcca aactcggtgc tgcgcaacca
     2041 cagcgcgcca tcggcctcgt aggaatgccc ctcggccgcg atgcgatcga ccacctgctg
     2101 caccttggca tcgcgataca gcgaggattc gaggaagtac acgtcgaacg cgacgccgaa
     2161 tgccttgagg tcgaggtcct gctcgtgccg caggcaggcg accgcgaacg cgcggatcgc
     2221 ctcgaggttt tccggatcgc ccgcgcccgt gacgtcgtgg ccctcgaccg tcacgcgctc
     2281 gccggc
//
LOCUS       DASSVL010000591         4376 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1312699,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000591 DASSVL010000000
VERSION     DASSVL010000591.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 4376)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4376)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4376
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1312699"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..835
                     /locus_tag="VFM52_10255"
     CDS             <1..835
                     /locus_tag="VFM52_10255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8765591.1"
                     /translation="ASQVAVPVNGQASGNGVAGLAGSATGNVGNVSGTAAGAGNADAA
                     ATSGIDGSGVRDVVTGAAGQAASQARSTASSAVGGTRGALQGARDAAGTVAGHAVANA
                     KGVAGQAASQARSAAASAVGGTRGALQGARDAAGTAAGHAVANAEGAAGQAAGSGASP
                     VAGTGMLTSNAAGTASSPAGSVGSSAAGQSAGSQSVASTGASGTAGHGSNRSVNASGA
                     VAGNGSGQAGAASTSGSHQGSAAANGQGSMQAGAQGSANGGFSASAQAGGSANAGAAQ
                     H"
     gene            1077..1568
                     /locus_tag="VFM52_10260"
     CDS             1077..1568
                     /locus_tag="VFM52_10260"
                     /inference="COORDINATES: protein motif:HMM:NF013936.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043169 - cation binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hemerythrin domain-containing protein"
                     /protein_id="HET8765592.1"
                     /translation="MQSNDTLLAAQHRDMELGIAGLVDGSGSRAEFRDAVLLLRKHIY
                     VEETALFPVIDRDRARWMALAQMRYEHGDMWPHIESALALLDARADLEAMLADATAMR
                     HLLQRHDRKEEEAIYAVADRYAADGGQPPLAELFTSMAIPDGWRCLRAPDAHGDPGDR
                     PVA"
     gene            1643..2398
                     /locus_tag="VFM52_10265"
     CDS             1643..2398
                     /locus_tag="VFM52_10265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019183222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HET8765593.1"
                     /translation="MPNPSVALVTGANQGIGLQIAKDLARHGVTVLVGARDLARGEAA
                     ARSIDGDARAIQLDVTVQASIDAAAQRIRRELGRLDILVNNAGIAHAGPAQRTLAEIV
                     AAGRASVASMAEVRAVFDTNVFGVIAVTQAMLALLRAAPAGRIVNVSSGRSSLTLASA
                     PGERRRREMFGVTYAASKAALNAVTLAFAFDLAATNIKVNAAAPGFTVTALNGFEGRR
                     TVEEAAREPVRLALLGPDGPTGTFSDDNGPIPW"
     gene            2697..3332
                     /locus_tag="VFM52_10270"
     CDS             2697..3332
                     /locus_tag="VFM52_10270"
                     /EC_number="1.11.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003255836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008379 - thioredoxin peroxidase activity
                     [Evidence IEA];
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA];
                     GO_process: GO:0098869 - cellular oxidant detoxification
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin"
                     /protein_id="HET8765594.1"
                     /translation="MSLQLGQVAPDFTLDSTQGSLHFADYARDHWLVFFSHPKDFTPI
                     CTTELGAFAHRKAEFEQRGAKLLGLSVDSVTDHKAWAKDIADVGGSEVGYPILADPDL
                     EVAKQYGMFHPEADAKVTVRSVFVIDPQRKVRTILTYPPSVGRNIDEILRTLDALQLT
                     DKGPVATPVDWKPGDDFVVPAKLSDAEVEQKFTGVRKVKPYLRYAKAAKVG"
     gene            3756..>4376
                     /locus_tag="VFM52_10275"
     CDS             3756..>4376
                     /locus_tag="VFM52_10275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014159548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin domain-containing protein"
                     /protein_id="HET8765595.1"
                     /translation="MPVRAAAEPDTGARLTVVYGSQTGNAKRLAEQLVQQAEASGLAV
                     RLLRADAYPQRELAKERLLYVVISTQGDGDAPDDARGLLDFLASRRAPRLDALSFAVL
                     GLGDSSYPQFCVIGRTLDARLAELGGKRLFAFGEADLDVETVATPWARQALGAARDAL
                     KGAGAAATTSVTPLRPHLEVATWSATRPFTAEIIATQRITTADSAKD"
BASE COUNT          644 a         1499 c         1618 g          615 t
ORIGIN      
        1 cgcgtcgcag gtcgccgtcc cggtgaatgg ccaggcgagc ggcaatggcg tcgccggcct
       61 cgcgggcagc gcgacgggga acgttggcaa cgtcagcggg accgccgcgg gtgccggcaa
      121 cgcggacgcc gctgcgacga gtggcattga cggttctggc gtgcgtgatg tggtgaccgg
      181 ggccgctgga caagccgcga gccaggcgcg ctccacggcg tcgtccgcgg tgggcggaac
      241 ccgcggtgcg ctgcagggtg cacgggatgc ggctggcacc gtggcgggcc atgccgtggc
      301 gaacgccaag ggcgtggccg ggcaggcggc gagccaggca cgctccgcgg cggcgtcggc
      361 ggtgggcgga acccgtggcg cgctgcaggg tgcacgggat gcggctggca ccgcggcggg
      421 ccatgccgtg gcgaacgccg aaggcgcggc ggggcaggcg gccggcagtg gcgcgtcccc
      481 ggttgcgggc accggcatgc tgacgtcgaa tgcggcgggc actgcgtctt cgccggcggg
      541 ctcggtcggt tcgagtgccg cgggccagtc cgccggcagc cagtccgtgg cgtcgacggg
      601 tgcgtccggc accgcgggcc atggcagcaa ccgctcggtc aatgcatcgg gtgcggtggc
      661 cggcaatggc agcgggcagg ctggcgccgc ttcgacgtcg ggcagccacc agggctcggc
      721 ggccgcgaat ggccagggca gcatgcaggc cggcgcccaa ggctcggcca acggcggctt
      781 ctccgcctcg gcgcaggccg gcggcagcgc caatgcgggt gccgcgcaac actgaaccat
      841 cggcgcggca ggcatggtac ggcgccccgg tcgacggggc gccgtcgttt ttggccggcc
      901 ccgtgaggct ggcttcgaca cgaagaagcg cgcgtggctg ggtgttcgtg cgtacgcgat
      961 tcccaggtgg atgcggccgc atcgcggggt ggatgccggc cggcgacgcg ggttcaccgg
     1021 ccaggcgggg atgccgcggc gctagacttc ggcggttcct tcggagatga cccgcgatgc
     1081 agtcgaacga cacgctgctt gccgcgcagc accgtgacat ggagcttggc atcgccgggc
     1141 tggtggatgg ctccggcagc cgggcggagt ttcgcgatgc ggtgctgctg ttgcgcaagc
     1201 acatctacgt cgaggaaacg gcgttgttcc cggtgatcga tcgcgatcgc gcgcgctgga
     1261 tggcactggc gcagatgcgc tacgagcacg gcgacatgtg gccgcacatc gaatcggcgc
     1321 tggcgctgct ggatgcgcgg gccgacctcg aggcgatgct ggcggacgcc acggcgatgc
     1381 ggcatttgct gcagcgtcac gaccgcaagg aagaggaggc gatctatgcg gtcgccgatc
     1441 gctacgcggc ggacgggggg cagccgccgc tggccgaact gttcacgagc atggccattc
     1501 cggacggctg gcgttgcctg cgcgcaccgg atgcgcacgg cgacccgggc gatcggccgg
     1561 tcgcgtaggc acggtcgccg gtggcggcgc gcgccgccca cggcaaaccg caacaccttc
     1621 tccatccacg tacgaggcaa gcatgccgaa cccgtccgtt gcactggtca ccggtgcgaa
     1681 ccagggcatc gggctgcaga tcgcgaagga tctcgcgcgg cacggggtga cggtgctcgt
     1741 cggcgcgcgc gacctggccc gcggcgaggc tgcggcgcgc agcatcgacg gcgatgcgcg
     1801 ggcgatccag ctcgacgtga cggtgcaggc ctccatcgac gccgccgcac agcgcatccg
     1861 ccgcgagctc ggccgcctcg acatcctggt gaacaacgcc ggcattgcgc acgcggggcc
     1921 agcgcagcgg accctggcgg agatcgtcgc ggccggccgc gcgagcgtgg cgtcgatggc
     1981 cgaagtgcgc gcggtgttcg acaccaacgt gttcggcgtg atcgcggtca cccaggcgat
     2041 gctggcgctg ctgcgcgcgg cgccggccgg acgcatcgtc aacgtgtcga gcggccgctc
     2101 ctcgctgacc ctcgcctcgg cgcccggcga gcgccggcgg cgcgagatgt tcggggtgac
     2161 ctacgccgcg tcgaaggccg cgctcaacgc ggtgacgctg gcgttcgcgt tcgatctcgc
     2221 cgcgaccaac atcaaggtga atgcggcggc gcccgggttc acagtgacgg ccctgaacgg
     2281 gttcgagggt cgccgcacag tggaggaggc ggcacgcgaa ccggtgcgtc tcgcgctgct
     2341 cgggccggac ggcccgaccg gcacgttctc cgacgacaac gggccgattc cctggtgagg
     2401 tgtccgttgg gaggaatgcc ggcggccacc gtcatgtcgg gctgaagtcc agcctgcagg
     2461 atcccccggc agcctgggcg tggcgccggg cttatgtgtc gcgggcataa gcaccgcgca
     2521 catccccatt tctgtccgcg gcagccgctg cacagaatcg acggcatgtc cccgcaggtt
     2581 tccggtttga ttccccccgc gccgccgttc ctgcggtggc tgcacgggcg atgtatgcgg
     2641 ccggttggca tcgcatcccg cctatcgaga caaaccccca tcaggagcaa gcaaacatga
     2701 gtctgcaact tggccaggtc gcccccgact tcacgctgga ttccacccag ggttcgctgc
     2761 acttcgcgga ttacgcgcgc gaccactggc tggtgttctt ctcgcacccg aaggacttca
     2821 ccccgatctg caccaccgag ctgggcgcgt tcgcgcaccg caaggcggag ttcgagcagc
     2881 gcggggcgaa actgctcggc ctgtcggtgg attcggtgac cgaccacaag gcatgggcga
     2941 aggacattgc cgacgtcggc ggcagcgagg tcggatatcc gatcctggcc gatccggatc
     3001 tcgaggtcgc caagcagtac ggcatgttcc atccggaagc cgacgcgaag gtgacggtgc
     3061 gctcggtgtt cgtcatcgat ccgcaacgca aggtgcgcac catcctcacc tatccgccgt
     3121 ccgtcggccg caacatcgac gagatcctgc gcacgctaga cgcgctgcag ctcaccgaca
     3181 agggcccggt cgcgacgccg gtggactgga agccgggcga cgatttcgtg gtgccggcga
     3241 agctcagcga cgccgaggtg gagcagaagt tcaccggcgt gcgcaaggtg aagccgtacc
     3301 tgcgctacgc gaaggccgcg aaggtcggct gagcaaccgg gcgccgcatc gcgcggcgcc
     3361 gattgaaacg ggatgccccg cgccacggac ggcgcggtag acagggacgg ttgaccgaca
     3421 ggcgacgcga gcgatcgtgc cgcctgtttt ttgcgcgcgc ggcactgccg gctgtgcgcc
     3481 gcatagaagg cgccggctcg cgcttatgcg ccatatgcac gcgtggcagc gtcatttccg
     3541 cacgcggcgc gcgcgcccta cggtggcgac tcccgccgcc gcacgccata cgaaccatgc
     3601 cagccaccgc gagcctgtca cgtttgcctt tgccgaagga ccggttccag cacctggacc
     3661 tgctgaccga aggattggat accgcaagcc tgtggtggct gtccggctac acggctggcc
     3721 tggcgcgcag agtggccccg ggcccggacg tcccggtgcc tgtgcgtgcg gcggcggaac
     3781 ccgacaccgg cgcgcggctc accgtggtct acggcagcca gaccggcaac gccaagcggc
     3841 ttgccgaaca gctggtgcaa caggccgagg ccagcggcct cgccgtgcgc ctgctgcgtg
     3901 ccgacgccta cccgcagcgc gagctggcga aagagcgcct gctctacgtc gtcatcagca
     3961 cccagggcga cggcgacgcg ccggacgacg cgcgcggctt gctcgatttt ctcgccagcc
     4021 ggcgcgcgcc gaggctggac gcgctgtcgt tcgcggtgct cggcctgggc gactccagct
     4081 acccgcagtt ctgcgtgatc ggccgcacgt tggatgcgcg cctggccgag ctgggcggca
     4141 agcgcctgtt cgcctttggt gaagccgatc tcgacgtgga aaccgtcgcc acgccatggg
     4201 ccaggcaggc cctcggcgcg gcgcgcgatg cgctgaaagg cgccggcgcc gcagccacca
     4261 ccagcgtcac gccgctgcgc ccgcacctcg aagtggccac ctggtcggcg acgcgcccgt
     4321 tcaccgcgga gatcatcgcc acccagcgca tcaccactgc cgacagcgcg aaggac
//
LOCUS       DASSVL010000592         2304 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_535959, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000592 DASSVL010000000
VERSION     DASSVL010000592.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2304)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2304)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2304
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_535959"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..744
                     /locus_tag="VFM52_10280"
     CDS             <1..744
                     /locus_tag="VFM52_10280"
                     /inference="COORDINATES: protein motif:HMM:NF013188.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015297 - antiporter activity [Evidence
                     IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HET8765596.1"
                     /translation="LAEFDDVVPLIGLAALFALAPRSIAVGGLDAPLWLFLATLATGV
                     VMGALAAALTRLKTRSAVQTIIVLGTALVVTGATARAGLAAPAALMTMGMTVSVLARN
                     SRRLHAVLAATARPVLLPVIALAGASLELHDGWALWLVAALAPFARLVVKLPVLARFR
                     FRLAPPSAPTPAVGLALLACGPVSVCVGLTVAAEFPGPVGRTVLAACLVSIVLGDVIG
                     RLALRHELARASEVHQPRVPPSATPEAPA"
     gene            741..2072
                     /locus_tag="VFM52_10285"
     CDS             741..2072
                     /locus_tag="VFM52_10285"
                     /inference="COORDINATES: protein motif:HMM:NF013188.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015297 - antiporter activity [Evidence
                     IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HET8765597.1"
                     /translation="MNALLARPWARHTLQLLVLLAILAVVWLERELAGPGTSVFAAIV
                     SLGLLFMAGSLVSELVEPFGLPHLTGYLLAGMLVGPHLLGLIDTHTVEQLGVLNQLAL
                     ALIALAGGAELRIASVRRALRSLAWAHLLQTVATVALVGLAFFALRGCMPFLDGIALP
                     AVAMIAVLWGILAATRSPSATLALMAQYRPRGPLTDMTVAFVMSSDIVIVVVLAVALS
                     AASAVIDPAAAFGMATFLAAGGKLLGSTLLGTALGLALIAYLRWGGRNLLFALLLIGF
                     PVSQLLKHLALDSLLSFLVAGFVVQNFSRHGDKLLHAIEGTAEVVFVVFFATAGAHLD
                     LPGFASVWPVAVALAGLRIAVTWGAARASSRLADDPPVVRRWGWSGLVSQAGLALGVA
                     IVITHEFPQFGAGFATLAVGVVGINEVVGPILFKIALKRAGEVGPTARHDG"
BASE COUNT          246 a          833 c          843 g          382 t
ORIGIN      
        1 ctggccgagt tcgacgacgt ggtgccgctc atcgggctgg ccgcgctgtt cgcgctcgcg
       61 ccgcgctcga tcgccgtggg cggactggac gcgccgctgt ggctgttcct cgccacgctc
      121 gccaccgggg tcgtgatggg cgcgctcgcg gccgcgttga cccgcctcaa gacgcgctcc
      181 gcggtgcaga cgatcatcgt gctgggcacc gcgctggtgg tgaccggcgc gaccgcgcgc
      241 gccgggctcg ccgcgccggc cgcgttgatg acgatgggca tgacggtgag cgtgctcgcg
      301 cgcaacagcc ggcggctgca cgcggtattg gccgcgaccg cgcgtccggt gctgctgccg
      361 gtgatcgcgc tcgccggcgc cagccttgag ctgcacgacg gctgggcgct gtggctggtc
      421 gccgcgctcg cgccgttcgc gcgcctggtg gtgaaactgc cggtgctcgc gcgcttccgc
      481 ttccgcctgg cgccgcccag cgcgccgacg ccggcggtgg ggctggcgct gctcgcctgc
      541 ggaccggtgt cggtctgcgt cgggctgacc gtcgccgccg agttccccgg cccggtcggg
      601 cgcacggtgc tggcggcgtg cctcgtatcg atcgtgctcg gcgacgtcat cggccgcctc
      661 gcgctgcgcc atgaactcgc gcgcgccagc gaagtgcacc aaccgcgagt accgccgtcc
      721 gccacgcccg aggcaccggc atgaacgccc tcctcgcacg gccgtgggcg cggcacacgc
      781 tgcagctgct ggtgctgctg gcgatcctcg ccgtggtgtg gctcgaacgc gaactcgccg
      841 ggccgggcac ttcggtgttc gccgccatcg tcagcctcgg cctgctgttc atggccggct
      901 cgctggtcag cgagctggtc gaaccgttcg gcctgccgca cctgaccggc tatctgctgg
      961 ccggcatgct ggtcgggccg cacctgctcg gcttgatcga cacccacacg gtggagcagc
     1021 tcggcgtgct gaaccagctc gcgctggcgc tgatcgcgct ggccggcggc gccgagctgc
     1081 gcatcgccag cgtgcgccgt gcgctgcgca gcctggcgtg ggcacacctg ctgcagaccg
     1141 tcgccacggt ggcgctggtc ggcctcgcgt tcttcgcgct gcgcggctgc atgccgttcc
     1201 tggacggcat cgcgctgccg gcggtggcga tgatcgccgt gctgtggggc atcctcgccg
     1261 ccacgcgcag cccgtcggcg acgctcgcgt tgatggcgca gtaccggccg cgcgggccgc
     1321 tgaccgacat gaccgtggcg ttcgtgatgt cgtcggacat cgtgatcgtg gtggtgctgg
     1381 cggtcgcact gtccgcggcc agcgcggtga tcgacccggc cgcggcattc ggcatggcga
     1441 cgttcctcgc cgccggcgga aaactgctcg gcagcaccct gctcggcacc gcgctcgggc
     1501 tggcgctgat cgcctacctg cgctggggcg ggcgcaacct gttgttcgcc ctgctgctga
     1561 tcggcttccc ggtgtcgcag ctcttgaagc acctggcgct ggattcgctg ctgtcgttcc
     1621 tcgtcgccgg cttcgtggtg cagaacttct cccgccacgg cgacaagctg ctgcacgcga
     1681 tcgagggcac ggccgaggtg gtgttcgtgg tgttcttcgc cactgccggc gcgcatctcg
     1741 acctgcccgg cttcgccagc gtgtggccgg tcgcggtggc cctcgccggc ctgcgcatcg
     1801 cggtgacctg gggcgcggcg cgcgcatcca gccgtctcgc cgacgacccg ccggtggtcc
     1861 gccgctgggg ctggtcgggg ctggtgtcgc aagccggcct cgcgctcggc gtcgccatcg
     1921 tcatcaccca cgagttcccg caattcggcg cgggcttcgc cacgctcgcg gtcggcgtcg
     1981 tcggcatcaa cgaagtcgtc ggcccgatcc tgttcaagat cgcgctgaaa cgcgccggcg
     2041 aggtgggccc taccgcgcgg catgacgggt gatgtgcgcc ccgcgctagg tgggcactga
     2101 acgggcggga aacgccgacc gcaagcggcg ccggcgcgca acgcccggcg ggccgccgga
     2161 tgccgccgat ccgcttgccg cacacggttt ttacaaataa ctggcgttca cccgggccgc
     2221 cggcgacggc cggcgcaagc aggcggaatg gcatgggtat tccttcgcgg ggacgaaaaa
     2281 gtcgacggga aggataccgg catg
//
LOCUS       DASSVL010000593         4124 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1115216,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000593 DASSVL010000000
VERSION     DASSVL010000593.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 4124)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4124)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4124
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1115216"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1002
                     /locus_tag="VFM52_10290"
     CDS             <1..1002
                     /locus_tag="VFM52_10290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007512240.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate dehydrogenase"
                     /protein_id="HET8765598.1"
                     /translation="TGARIVVEKPFGRDLASARELNRTLHEHFPESSIFRIDHYLGKE
                     AVQNLLYFRFANSVLEPVWNNRYVDRVQITMAEAFGVDGRGSFYEGVGAIRDVLQNHL
                     LQVTSLLAMDAPIGSDPAALNAEKLRLFRAMRPLGPRDVVRGQYRGYREVPGVAPGSN
                     VETFIGLRLAIDTWRWSGVPFLIRAGKKLPVTTTEVVVDMKTPPLAVFDPIDATRSNY
                     FRFRLSPQVVIAEGMRVKRPGEAMLGAPVELVAHHRAASEMAPYERLLGDALRGDNAL
                     FTSDECVEAAWRVVDRVLGQEDLVRFYEPGSWGPPEAAVLAGAEGWHNPRQAPTAPG"
     gene            1090..2193
                     /gene="tal"
                     /locus_tag="VFM52_10295"
     CDS             1090..2193
                     /gene="tal"
                     /locus_tag="VFM52_10295"
                     /EC_number="2.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015449175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004801 - transaldolase activity [Evidence
                     IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transaldolase"
                     /protein_id="HET8765599.1"
                     /translation="MKATQQLHEAGQSLWLDNITRTLLDDGTLARYIRENSVTGLTSN
                     PSIFEKAIASGEAYDAAIHAKSLAGMAGEPLFMELALEDLRRAADLFKPIFDATHQVD
                     GWVSMEVSPLLAADTQGTIAAAEAIHAQAQRPNLFVKIPGTPEGVPAIEEAIYRGIPI
                     NVTLLFSRDQYQASAEAYLRGIERRLAEGKDPLVASVASVFISRWDVAANAQLPADQH
                     NTLGIAVARETYRAYRELLASARFQKLAAKGARPQRLLWASTGTKDPSASDTLYVEAL
                     AAPNTIDTIPEKTLHAYADHGKLGALLPVDGGDAEAVLAKLAKAGIDRAALATKLQVD
                     GAAAFVKAWQQMLDKIATKQAALDAKSKAPVSR"
     gene            2190..3845
                     /gene="pgi"
                     /locus_tag="VFM52_10300"
     CDS             2190..3845
                     /gene="pgi"
                     /locus_tag="VFM52_10300"
                     /EC_number="5.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008439440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004347 - glucose-6-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate isomerase"
                     /protein_id="HET8765600.1"
                     /translation="MNRAELTSLPAWHALERHRDQLAPRHLRELFAQDAKRGETFAAE
                     AVGLYYDYAKQRVTTETLTLLRELARARHLSQHIAAMFSGEKINRTENRAVLHVALRA
                     PRDAHILVDGLDVVPDVHAVLDRMAAFADQVRSGAWKGFTGERIRNVVSIGIGGSDLG
                     PVMAFEALRDYTRRDMTFRFVSNVDGVDFAEAVRDLDAAATLFVVCSKTFTTLETLTN
                     AHAARAWCAKALGSEDAIARHFVAVSTNAAEVAAFGIDTANMFGFWDWVGGRYSMDSA
                     IGLSTMIAIGPQAFRDMLAGFHAMDKHFRSAPFEANLPVLMGLIGVWNTNFLGAETVA
                     VLPYEQYLKRFPAYLQQLTMESNGKHVTLAGAHVDYATGPIYWGEPGTNGQHSFYQLI
                     HQGTQLIPCDFIGFGQTLQRVPAQGGGDQHDLLIANLIAQGEALAFGKTTEEVRAEGT
                     DAALAPHRTFEGNRPSSTILAAKLPPFALGTLIALYEHSVFVQGVIWGIDSFDQWGVE
                     LGKTLASATLPELESAAEPALRHDSSTNALIRRYRALRDGRSA"
     gene            3829..>4124
                     /locus_tag="VFM52_10305"
     CDS             3829..>4124
                     /locus_tag="VFM52_10305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8765601.1"
                     /translation="MAGRHDRPRHPPPGLIRDDARRDSPFAPGVACAGRRRRSGASIS
                     ALQACAPGERREYRRDLAPTKNSKTVEISMSQQISPLAGQPAPASILVDVPALLA"
BASE COUNT          671 a         1504 c         1356 g          593 t
ORIGIN      
        1 acaggcgcac gcatcgtggt ggagaagccg ttcgggcgcg acctcgcctc ggcgcgcgag
       61 ctcaaccgca cgctgcacga gcattttccg gaatcgagca tcttccgcat cgaccattac
      121 ctcggcaagg aggcggtgca gaacctcttg tatttccgct tcgccaacag cgtgctcgaa
      181 ccggtgtgga acaaccgcta cgtcgaccgc gtgcagatca ccatggccga ggccttcggc
      241 gtggatgggc gtggcagctt ctacgagggc gtcggcgcga tccgcgacgt gctgcagaat
      301 catttgctgc aggtgacttc gctgttggcg atggacgcgc cgatcggcag cgacccggcc
      361 gcgctcaacg cggaaaagct gcgcctgttc cgcgcgatgc gcccgctcgg cccgcgtgat
      421 gtggtgcgcg gccagtaccg cggctaccgc gaggtgccgg gcgtcgcgcc cggctcgaac
      481 gtggagacct tcatcggcct gcgcctggcg atcgacacct ggcgctggtc gggggtgccg
      541 ttcctgatcc gcgccggcaa gaagctgccg gtgaccacca ccgaggtggt ggtggacatg
      601 aagacgccgc cgctggcggt gttcgacccc atcgacgcca cgcgctccaa ctacttccgc
      661 ttccgcctct cgccgcaggt ggtgatcgcc gagggcatgc gcgtgaagcg ccccggcgag
      721 gcgatgctcg gcgcgccggt ggaactcgtc gcgcaccatc gcgcagccag cgagatggcg
      781 ccgtacgagc gcctgctcgg cgatgcgctg cgcggcgaca acgcgctgtt caccagcgac
      841 gagtgcgtcg aggccgcgtg gcgcgtcgtc gaccgcgtgc ttggccagga agatctcgtg
      901 cgcttctacg agcccggcag ctggggcccg cccgaggccg ccgtgctggc cggcgccgaa
      961 ggctggcaca acccgcgcca ggcgcccacc gcacccggct gaagcttgcg ccgcgggccc
     1021 cgcgtccgca tttcgccagc gtaagctcga cagctgcccc caccccatcg attccggaga
     1081 aacatcagca tgaaagcgac ccagcaattg cacgaagccg gccagagcct gtggctggac
     1141 aacatcaccc gcaccctgct cgacgacggc acgctcgcgc gctacatccg cgagaactcg
     1201 gtgaccggcc tcacctcgaa cccgagcatc ttcgaaaagg cgattgccag cggcgaggcg
     1261 tatgacgccg caatccacgc caagtcgctc gccgggatgg ccggcgaacc gctgttcatg
     1321 gagctggcgc tcgaagacct gcgccgcgcc gccgacctgt tcaagccgat cttcgacgcc
     1381 acccaccagg tcgacggctg ggtgtcgatg gaagtctccc cgctgctcgc cgccgacacc
     1441 cagggcacga ttgccgccgc cgaggcgatc cacgcccagg cgcagcgccc gaacctgttc
     1501 gtgaagattc cgggcacgcc ggaaggcgtg ccggcgatcg aggaagcgat ctatcgcggc
     1561 atcccgatca acgtgacgct gctgttctcg cgcgaccagt accaggccag cgccgaggcc
     1621 tacctgcgcg gcatcgagcg ccgcctggcc gagggcaagg acccgctcgt ggcctcggtc
     1681 gcctcggtgt tcatcagccg ctgggacgtg gccgccaacg cgcagctgcc ggccgaccag
     1741 cacaacacgc tgggcatcgc ggtcgcccgc gaaacctacc gcgcctatcg cgagctgctg
     1801 gcctccgcgc gcttccagaa gctcgccgcc aagggcgcgc gcccgcagcg cctgctgtgg
     1861 gcctccaccg gcaccaagga cccgagcgcc tccgacacgc tctacgtcga agcgctggcg
     1921 gcgccgaaca cgatcgacac catcccggaa aagacgctgc acgcctacgc cgatcacggc
     1981 aagctcggcg ccctgctgcc ggtggatggc ggcgacgccg aagcggtgct ggccaagctc
     2041 gccaaggccg gcatcgaccg cgcggcgctg gccaccaagc tgcaggtcga cggtgccgcc
     2101 gcgttcgtca aggcgtggca gcagatgctc gacaagatcg ccaccaagca ggccgcgctc
     2161 gacgccaaga gcaaagcgcc ggtgtcgcga tgaaccgcgc ggaactcacc tcgctgcctg
     2221 cgtggcacgc cctggaacgc caccgcgacc agctcgcgcc gcgtcacctg cgcgagttgt
     2281 tcgcgcagga tgcgaagcgc ggcgaaacgt tcgccgccga agccgtcggc ctgtactacg
     2341 actatgcgaa gcagcgcgtc accaccgaaa ccctcacgct gctgcgcgag ctggcgcgcg
     2401 cgcggcatct gagccagcac atcgccgcga tgttctccgg cgagaagatc aaccgcaccg
     2461 agaaccgcgc cgtgctgcac gtggcgctgc gcgcgccgcg cgatgcgcac attctggtgg
     2521 acggcctcga cgtggtgccc gatgtgcacg cggtgctcga ccgcatggcc gcgtttgccg
     2581 accaggtgcg cagcggcgcg tggaagggct tcaccggcga gcgcatccgc aacgttgtat
     2641 cgatcggcat cggcggctcc gacctcggcc cggtgatggc gttcgaggcg ctgcgcgact
     2701 acacccggcg cgacatgacg ttccgcttcg tgtcgaacgt ggacggcgtc gatttcgccg
     2761 aggcggtgcg cgacctggat gccgccgcga cgctgttcgt cgtgtgctcc aagaccttca
     2821 ccacactgga aacgctgacc aacgcgcatg ccgcgcgcgc ctggtgcgcg aaggcgctgg
     2881 gcagcgagga cgcgatcgcg cgccatttcg tcgcggtgtc caccaacgcc gcggaagtcg
     2941 ccgcgttcgg catcgacacg gcgaacatgt tcggcttctg ggactgggtc ggcggccgct
     3001 actcgatgga ttcggcgatc gggctgtcga ccatgatcgc gatcggcccg caggcgttcc
     3061 gcgacatgct ggccggcttc cacgcgatgg acaagcactt ccgcagcgcg ccgttcgagg
     3121 cgaacctgcc ggtgctgatg ggtttgatcg gcgtgtggaa caccaacttc ctcggcgccg
     3181 aaaccgtggc cgtgctgccc tatgagcagt acctgaagcg cttcccggcc tacctgcagc
     3241 agctcacgat ggagtccaac ggcaagcacg tcacgctcgc cggcgcgcac gtcgactacg
     3301 ccaccggccc gatctactgg ggcgagccgg gcaccaacgg ccagcactcg ttctaccagc
     3361 tgatccacca gggcacccag ctgatcccct gcgacttcat cggcttcggc cagaccttgc
     3421 agcgcgtgcc tgcccagggc ggcggcgacc agcacgacct cctgatcgcc aacctgatcg
     3481 cgcagggcga ggcgctggcg ttcggcaaga ccaccgagga agtgcgcgcc gaaggcacgg
     3541 atgccgcgct cgcgccgcac cgcacgttcg agggcaaccg gccgagcagc accatcctcg
     3601 ccgcgaagct cccgccgttc gcgctcggca ccctgatcgc gctctacgag cacagcgtgt
     3661 tcgtgcaggg cgtgatctgg ggcatcgact cgttcgacca gtggggcgtc gagctcggca
     3721 agacgctcgc gtcggcgacg cttcccgagc tcgagagcgc cgccgagccc gcgctgcggc
     3781 acgacagctc gaccaacgcc ctgattcgcc gctaccgcgc gctgcgcgat ggccggtcgg
     3841 catgaccggc ccaggcatcc tccgcccggc ctgatccgcg atgacgcgcg ccgggacagt
     3901 ccgttcgcgc caggcgtcgc ttgcgccggc cggcggcgtc gaagcggcgc ttcgatttcg
     3961 gcccttcaag cctgcgctcc gggcgaacgg cgggaatatc gccgggatct ggcacccacc
     4021 aagaacagca agacagtcga gatttccatg agccaacaga tcagcccgct cgccggccag
     4081 ccggcacccg cctccatcct cgtcgacgtg cccgcgctac tggc
//
LOCUS       DASSVL010000594         4707 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_282241, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000594 DASSVL010000000
VERSION     DASSVL010000594.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 4707)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4707)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4707
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_282241"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..324)
                     /locus_tag="VFM52_10310"
     CDS             complement(<1..324)
                     /locus_tag="VFM52_10310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014402190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid-A-disaccharide synthase"
                     /protein_id="HET8765602.1"
                     /translation="MSDPAQSASPIPNPPSRLVVLLAGEESGDQLGADLITALRARCP
                     HARFAGIGGRRMQALGFEAWHDVSELSLFGLAEVVAHLPRLLRLRRELVGRLLRERPA
                     VVVGID"
     gene            complement(501..1274)
                     /gene="lpxA"
                     /locus_tag="VFM52_10315"
     CDS             complement(501..1274)
                     /gene="lpxA"
                     /locus_tag="VFM52_10315"
                     /EC_number="2.3.1.129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015447103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008780 -
                     acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine
                     O-acyltransferase activity [Evidence IEA];
                     GO_process: GO:0008610 - lipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-ACP--UDP-N-acetylglucosamine
                     O-acyltransferase"
                     /protein_id="HET8765603.1"
                     /translation="MIHPTALIDPSAKIGTNVSIGAYSVIGAEVEIGDNTVIGPHVVV
                     EGPTRIGRDNRILQFASLGGDPQDKKFAGERTELVIGDRNLIREFVTINRGTLGGGGL
                     TRVGDNNWLLAYVHVAHDCKVGNHVVFSNYSALAGHAEIGDWVIISGYAGVHQFCKVG
                     AHAFIAMGCLVGTDVPPFLMMANDQHGRPRGINSEGLKRRGFDGARISSIKRAYRTLY
                     MAGLPLTEAREKLIEQAKDSADVRAMVEFLDHSERSLAR"
     gene            complement(1271..1744)
                     /gene="fabZ"
                     /locus_tag="VFM52_10320"
     CDS             complement(1271..1744)
                     /gene="fabZ"
                     /locus_tag="VFM52_10320"
                     /EC_number="4.2.1.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008437854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-ACP dehydratase FabZ"
                     /protein_id="HET8765604.1"
                     /translation="MTEENFEITLPVPVEEIRRLLPHRYPFLLVDRVVEFVPDHSAVA
                     IKNVTINEPFFTGHFPTQPVMPGVLLIEAMAQAAGLLTQLSNRSKGNLQNPLFYLVKV
                     DNARFSAPVVPGDQLRLEVSIKRVMRGMGLFAARAVVDGKEVASCELMCAARSEK"
     gene            complement(1737..2768)
                     /gene="lpxD"
                     /locus_tag="VFM52_10325"
     CDS             complement(1737..2768)
                     /gene="lpxD"
                     /locus_tag="VFM52_10325"
                     /EC_number="2.3.1.191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007804454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016410 - N-acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-(3-hydroxymyristoyl)glucosamine
                     N-acyltransferase"
                     /protein_id="HET8765605.1"
                     /translation="MSTPTSHTLDELAQRFGLQVRGNGSRRITGVATLAHADGSQLAF
                     LANAKYIAQLASTRAGGVIVHASHAADCPVDALIAPDPYVAYAQIAALFVPAPATPPG
                     IHPSAVIEPGARIAASASIGAGCVVAASAVIGDGAVLGPHCIVGEDCTIGAHARLVAR
                     VTLVMRVTLGRRVLVHPGAVIGSDGFGLAFATDHWVKIPQLGGVRIGDDCEIGANTTI
                     DRGALDDTVLEEDVRLDNQIQIAHNVHVGAHTAMAGCAAVAGSATIGRYCQIGGNAGV
                     LGHLEVADRVTITAKSLVTHSIRESGEYSSGTPLQANREWRKSAARFKHLDDFARRLA
                     ALEKDKSDD"
     gene            complement(2872..>4707)
                     /gene="bamA"
                     /locus_tag="VFM52_10330"
     CDS             complement(2872..>4707)
                     /gene="bamA"
                     /locus_tag="VFM52_10330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007079943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamA"
                     /protein_id="HET8765606.1"
                     /translation="LGTPNWMSWYSKNDQYSREKLSGDLEKLQSYYMDRGYADFGVDS
                     TQVTIAPNKQSMYIAADIKEGEIYKVADVKLLGTLVLPESTLRQLVFIKPGQVFNRGA
                     IENSTKAIKALLANIGYAYAKVTPYPKLDKEKRTVDLTLYIEPGPRVYVRRVIFEGNT
                     LTEDNVLRRQMRQLEGSWYSQAMIDRSKIRLQQLGYFKKVDIDKKKVPGSDDQVDVTV
                     KVEEQSAGSLQFGIGYSQYSGMILSASVSQRNLFGTGDSVSVSGERSSYYTRFNVNYY
                     NPYLTDNGVGIGYSATYSKTDFGNVDNSEFANYSTSQKAFSTYLGFPITDFQSIRAGL
                     GLSSNKINSIPGLTPQPLIDYQNEIGNKTVHSFTGTLGWNLDTRNGFWAPTRGGVLSL
                     NSEVALPGSTVKYWKLTGEANHYWPIGHGFVLYLDGQVGYGKSYGQNGISDTAFDQLK
                     TAYAANGQTLTDMRNDFPFWENFYSGGVRDVRGFQDNTLGPRLCAGTGTPTTSGICNG
                     SYYNYAQPIGGAFKVLGTAELYLPLPFLKDVNTARVSWFVDVGNAYANWQSFSASTLR
                     ASTGLSLHWQAPIGPMIINFAVPFRTQADDGHYEERIQFTFGSMF"
BASE COUNT          708 a         1498 c         1654 g          847 t
ORIGIN      
        1 gtcgatgccg accacgaccg ccggccgctc gcgcagcagg cgccccacca gctcacgccg
       61 cagcctgagc aggcgcggca ggtgggccac cacttccgcc agcccgaaca atgacagctc
      121 ggacacgtcg tgccaggcct cgaacccgag cgcctgcatc cggcgcccgc cgatgccggc
      181 aaatcgtgcg tgagggcagc gcgcgcgcag cgccgtgatc aggtcggcac ccaactggtc
      241 gccggactcc tcgccggcca gcaggacgac gagccgggat gggggattcg ggatggggga
      301 tgcgctttgc gctgggtcgc tcatggggcc agtgtagtgg ccgggtgggg gcgagcaggc
      361 gtgcgcggct tttttgcgtc ggcggatggc gggctgccgc tgcggctcac gctgcgagcc
      421 agcggctttc gctacggtat cccacgcgcg ctggctcaaa gagccaaagc gcatgcctga
      481 ttgcccgata agcggggcgc ttatcgggcg agcgatcgct cgctgtggtc caggaactcg
      541 accatcgcgc gcacgtcggc gctgtccttc gcctgctcga tcagtttctc gcgcgcttcg
      601 gtcagcggca ggccggccat gtacagcgtg cggtaggcgc gcttgatcga gctgatgcgt
      661 gcaccgtcga agccgcggcg tttcagcccc tcgctgttga tgccgcgcgg acggccgtgc
      721 tggtcgttgg ccatcatcag gaacggcggc acgtcggtgc cgaccaggca gcccatggcg
      781 atgaaggcgt gcgcgccgac cttgcagaac tggtgcacgc cggcatagcc ggaaatgatc
      841 acccagtcgc cgatctcggc gtgcccggcc agcgcggagt aattggagaa caccacgtgg
      901 ttgccgacct tgcagtcgtg ggccacgtgc acgtaggcca gcagccagtt gttgtcgccc
      961 acgcgggtga ggccgccgcc gccgagggtg ccgcggttga tggtgacgaa ttcgcggatc
     1021 aggttgcggt cgccgatgac cagctcggtg cgctcgccgg cgaatttctt gtcctgcggg
     1081 tcgccgccga gcgaggcgaa ttgcaggatg cggttgtcgc gcccgatccg cgtcggcccc
     1141 tcgaccacca cgtgcgggcc gatcacggtg ttgtcgccga tctcgacctc ggcaccgatc
     1201 acgctgtagg cgccgatcga gacgttcgtg ccgatcttcg ccgagggatc gatgagcgcg
     1261 gtcggatgga tcatttctcc gaccttgccg cgcacatcag ttcgcagctc gcgacttcct
     1321 tgccgtccac cacggcacgc gccgcgaaca ggcccatgcc gcgcatcacg cgcttgatcg
     1381 acacctccag ccgcagctgg tcgcccggca ccaccggcgc ggagaaacgc gcgttgtcga
     1441 ccttgaccag gtagaacagc gggttctgca ggttgccctt gctgcggttg gagagctggg
     1501 tgagcaggcc ggcggcctgc gccatcgcct cgatcagcag cacgcccggc atcaccggct
     1561 gcgtcgggaa gtggccggtg aagaacggct cgttgatggt gacgttcttg atcgcgacgg
     1621 cgctgtggtc gggcacgaac tcgaccaccc gatccaccag caggaacggg tagcgatgcg
     1681 gcaacaggcg gcggatttcc tccaccggca ccggcagggt gatctcgaaa ttttcctcag
     1741 tcatcgctct tgtccttttc cagtgccgcc aggcggcgcg cgaaatcgtc caggtgcttg
     1801 aaccgggctg cgctcttgcg ccattcgcgg ttcgcttgca gcggcgtgcc ggaggaatac
     1861 tcgccgcttt cgcgtatcga atgggtgacc aggctcttgg cggtaatggt aacccggtcg
     1921 gccacttcga gatggccgag cacgccggcg ttgccgccga tctggcaata gcggccgatg
     1981 gttgcgctgc cggccaccgc ggcgcaaccc gccatggcgg tgtgcgcgcc gacgtgcacg
     2041 ttgtgcgcga tctggatctg gttgtcgagg cgcacgtctt cctcgagcac ggtgtcgtcg
     2101 agggcgccac ggtcgatcgt ggtattggcg ccgatctcgc agtcgtcgcc gatgcgcacg
     2161 ccaccgagct gcgggatctt cacccagtgg tcggttgcga acgcgagtcc gaagccgtcg
     2221 gagccgatca ccgcgccggg gtgtaccagc acgcgccggc cgagcgtcac ccgcatcacc
     2281 agggtcaccc gtgccaccag gcgtgcgtgg gcgccgatcg tgcagtcctc gccgacgatg
     2341 cagtgcgggc cgagcaccgc gccatccccg atcaccgcgc tggcggcgac gacgcagccg
     2401 gccccgatgc ttgcgctggc ggcgatgcgc gcgccgggct cgatcaccgc gctcgggtgg
     2461 atgcccggtg gtgtggcggg cgccggcacg aacagcgcgg cgatctgtgc gtaggcgacg
     2521 tacggatcgg gtgcgatcag cgcatccacc gggcagtcgg cggcgtggct ggcgtgcacg
     2581 atcacgccgc cggcgcgggt gctggccagc tgcgcgatgt acttggcgtt ggcgaggaac
     2641 gcgagctgcg agccgtccgc gtgggccagg gtggcgacgc cggtgatgcg ccggctgccg
     2701 ttgccacgca cctgcaggcc gaagcgctgc gcgagctcgt cgagggtgtg gctggttggc
     2761 gtgctcaagg gcttctccgc ggcaggggcg tcattgtatc gacggggcgg cggcaagcga
     2821 aaagcgcggc gaaccgcgct tttcgctggg caccacacca ttgcgccggg ctcagaacat
     2881 cgagccgaag gtgaactgga tgcgttcctc gtagtggccg tcgtccgcct gcgtccggaa
     2941 cggcaccgcg aagttgatga tcatcgggcc gatcggcgcc tgccagtgca gcgacaggcc
     3001 ggtcgaggcg cgcagcgtcg aggcgctgaa gctctgccag ttggcgtagg cgttgccgac
     3061 gtcgacgaac cacgacacgc gcgcggtgtt gacgtccttg aggaacggca gcggcaggta
     3121 cagctcggcg gtgccgagca ccttgaatgc gccgccgatc ggctgtgcgt agttgtagta
     3181 gctgccgttg cagatgccgc tcgtcgtcgg cgtcccggtg ccggcgcaca ggcgcggccc
     3241 gagcgtgttg tcctggaagc cacgcacgtc gcgcacgccg ccggagtaga agttttccca
     3301 gaacgggaag tcgttgcgca tgtcggtcag ggtctggccg ttcgcggcgt acgctgtctt
     3361 gagctggtcg aaggcggtat cgctgatgcc gttctggccg tacgacttgc cgtagccgac
     3421 ctggccgtcg aggtagagca cgaagccgtg gccgatcggc cagtagtggt tggcctcgcc
     3481 ggtcagcttc cagtacttca cggtggagcc gggcagggcg acctcggagt tgagcgacag
     3541 cacgccgccg cgggtcggcg cccagaaacc gttgcgggtg tcgaggttcc agcccagcgt
     3601 gccggtgaac gagtgcaccg tcttgttgcc gatctcgttc tggtagtcga tcagcggctg
     3661 cggggtgagg ccggggatcg agttgatctt gttgctggac aggccgagcc cggcgcgaat
     3721 gctctggaag tcggtgatcg ggaagccgag gtaggtcgag aacgccttct ggctggtcga
     3781 gtagttggcg aactcgctgt tgtcgacgtt gccgaagtcg gtcttggaat aggtggcgct
     3841 gtagccgatg ccgacgccgt tgtcggtcag atacgggttg tagtagttga cgttgaagcg
     3901 cgtgtagtag ctgctgcgct cgccgctcac cgacacgctg tcgccggtgc cgaacaggtt
     3961 gcgctgcgat accgacgccg agaggatcat gccggaatac tgcgagtagc cgatgccgaa
     4021 ctgcaggctg ccggcggact gctcctcgac cttgaccgtc acgtcgacct ggtcgtccga
     4081 tcccggcacc ttcttcttgt cgatgtcgac cttcttgaag tagccgagct gctgcaggcg
     4141 gatcttcgag cggtcgatca tcgcctgcga ataccacgag ccttcgagct ggcgcatctg
     4201 ccggcgcagc acgttgtcct cggtgagcgt gttgccctcg aagatcaccc ggcgcacgta
     4261 cacgcgcggg cccggctcga tgtagagcgt gaggtcgacg gtgcgctttt ccttgtcgag
     4321 cttgggatag ggcgtgacct tggcgtaggc atagccgatg ttcgccagca gtgccttgat
     4381 cgccttggtg ctgttctcga tcgcgccgcg gttgaacacc tgcccgggct tgatgaacac
     4441 cagctggcgc aacgtcgatt ccggcaacac cagggtgccg agcagcttga cgtccgcaac
     4501 cttgtagatc tcgccttcct tgatgtcggc ggcgatgtac atggactgct tgttcggcgc
     4561 gatcgtcacc tgggtcgaat cgacgccgaa gtcggcgtag ccgcgatcca tgtagtacga
     4621 ctgcagcttc tccaggtcgc cggaaagctt ctcgcgcgag tactggtcgt tcttcgagta
     4681 ccacgacatc cagttcggcg tgcccag
//
LOCUS       DASSVL010000595         2315 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_395212, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000595 DASSVL010000000
VERSION     DASSVL010000595.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2315)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2315)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2315
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_395212"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..213
                     /locus_tag="VFM52_10335"
     CDS             <1..213
                     /locus_tag="VFM52_10335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015448238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding protein"
                     /protein_id="HET8765607.1"
                     /translation="DRLEAEVLALSERRGSASVAQALYRESAASAQARELRREERRLT
                     GQQAPDRRPDKHARRRLRELKDQSWD"
     gene            328..879
                     /locus_tag="VFM52_10340"
     CDS             328..879
                     /locus_tag="VFM52_10340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017460936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HET8765608.1"
                     /translation="MNGTSFLRKLLGTMGAAGEPATAWRRTLAETRVLVVDDSPTICA
                     VLGRMLEQDGYAVHKAADGEQAIELAVAEQPGLIFLDIVLPGVNGFAVLRTLRHAPQT
                     AHIPIVMMSGNPQATEQFYVQRFGADDFIRKPFGRGEVQASIDTLVRAGRLPPCVDEV
                     PAGVLQGAAVGADAEPATVVHPA"
     gene            996..1592
                     /locus_tag="VFM52_10345"
     CDS             996..1592
                     /locus_tag="VFM52_10345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017460936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HET8765609.1"
                     /translation="MAGLGLLKRLVGGERRHSEPRVRAPASTRVMVVDDSPSIRAVLG
                     KMLSQDGYVVIKAGNGAEAMEMARRERPGLIFLDIVMPGMSGFEVLRTLRHEAATHAT
                     PIVMISGNVQATEQFYVQRYGADDFMKKPFGREEVFERIQQLVLAGKLPRRAAGEPEV
                     PAATPGEAEWDAIPDIAMPDAAHLAAATKTPPDDPKVD"
     gene            complement(1605..>2315)
                     /locus_tag="VFM52_10350"
     CDS             complement(1605..>2315)
                     /locus_tag="VFM52_10350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008213548.1"
                     /note="This protein performs the mismatch recognition step
                     during the DNA repair process; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair protein MutS"
                     /protein_id="HET8765610.1"
                     /translation="GGKSTYMRQCALIVLLAHIGSFVPAGSTRIGPVDRIFTRIGAGD
                     DLARGQSTFMVEMSETANILHNATPHSLVLMDEVGRGTSTYHGLSLARAAAVHLATVN
                     HAYTLFATHYFELTELAAQFGHIANVHLDAVEYGEQLVFMHAVKDGPANRSFGLQVAA
                     LAGLPRSVIADARRTLGKLEHGMLAGTAPAPENSPQLSLFAPPAPSALDDALDAIDPD
                     ALSPREALEALYRLKALR"
BASE COUNT          357 a          757 c          856 g          345 t
ORIGIN      
        1 gaccgactgg aagccgaggt gctggcgctg tccgaacgac gcggttcggc cagtgtggcg
       61 caggcgctct atcgcgaaag tgccgccagc gcgcaggccc gcgagctgcg tcgcgaggag
      121 cggcgcctta ccggccagca ggcaccggac cggcgcccgg acaagcacgc gcgccgccgg
      181 ttgcgcgagc tcaaggatca atcctgggac tgaccgccgc tccgcgcacg atgcgtgagc
      241 actgcatcgc agtttgtggc cagcggtcgt cgcaccatct tccccgacac gtcgcacgcg
      301 gcggcgccgg catgcgggag gtggggaatg aacggcacaa gctttttgcg caagctgctg
      361 gggaccatgg gggccgcggg cgagccggcg acggcgtggc gcaggacgct cgcggagacg
      421 cgcgtgctgg tggtggatga ctcgccgacg atctgtgcgg tgctcggacg catgctggag
      481 caggatggct acgcggtgca caaggcggcc gacggcgagc aggccatcga gctggcggtt
      541 gccgagcagc cagggctgat ctttctcgat atcgtgctgc cgggcgtgaa cggctttgcg
      601 gtgttgcgca cgttgcggca tgcaccgcag acggcgcata tcccgatcgt gatgatgagc
      661 ggcaacccgc aagccaccga acagttctac gtgcagcgct tcggtgccga cgacttcatc
      721 aggaagccgt tcggccgcgg cgaggtgcag gccagcatcg acaccctggt gcgcgccggg
      781 cgcctgccgc cgtgcgtcga tgaggtgccg gccggcgtgc tgcagggggc agcggtgggg
      841 gccgacgcgg agccggccac cgtggtgcat ccggcatgac cgcgccgctg gcctgacgcg
      901 cgcggtatcg tcacgccaat tcgcttgcgt cggcgcccag cgccggtgac acttgccgcg
      961 tgccgtccgc ggcgaggcgg ccaaggggcg aggggatggc tggattgggt ctgttgaagc
     1021 gtctggtcgg cggcgagcgc cgccacagcg agccgcgcgt gcgggcgccg gcatcgacgc
     1081 gcgtgatggt ggtcgatgac tcgccctcga tccgcgccgt gctcggcaag atgctgagcc
     1141 aggatggcta cgtggtcatc aaggccggca acggcgccga ggcgatggaa atggcccggc
     1201 gcgagcgccc cggcctgatc tttctcgaca tcgtcatgcc cggcatgtcc ggtttcgagg
     1261 tattgcgcac gttgcgccac gaggccgcca cgcacgccac gccgatcgtg atgatcagcg
     1321 gcaacgtgca ggcgaccgag cagttctacg tgcagcgcta cggcgccgat gacttcatga
     1381 agaagccgtt cggccgcgag gaagtgttcg agcgcatcca gcagctcgtg ctcgccggca
     1441 agttgccgcg gcgcgccgcc ggcgaaccgg aggtgccggc agccacgccg ggtgaggccg
     1501 agtgggatgc gattcccgat atcgcgatgc cggatgccgc ccacctggcc gcggcaacga
     1561 agacgccgcc ggacgatccg aaggtggatt gaccgctgcg cccgtcagcg cagcgccttc
     1621 agccgataca gcgcttccag cgcctcgcgc ggcgacagcg cgtcggggtc gatcgcatcg
     1681 agcgcgtcgt cgagggcgga cggtgccggc ggcgcgaaca gcgacagctg cggcgagttc
     1741 tcgggcgccg gggcagtgcc cgccagcatg ccgtgctcga gcttgccgag cgtgcgccgc
     1801 gcgtcggcga tcacgctgcg cggcaggccg gcgagcgcgg ccacctgcag gccgaagctg
     1861 cggttggccg ggccgtcctt caccgcgtgc atgaacacca gttgttcgcc gtattcgacc
     1921 gcgtcgagat gcacgttggc gatgtgcccg aactgcgccg ccagttcggt caattcgaaa
     1981 taatgcgtgg caaacagcgt gtaagcatga ttgaccgtgg ccaggtgcac cgctgccgcg
     2041 cgcgccagcg acaggccgtg gtaggtggac gtgccgcggc cgacctcgtc catcagcacc
     2101 agcgaatgcg gcgtggcgtt gtgcaggata ttggcggtct cgctcatttc caccatgaag
     2161 gtggattgcc cgcgcgcgag gtcatcgccc gcgccgatgc gggtgaagat gcgatccacc
     2221 ggaccgatcc gcgtgctgcc cgcgggcacg aaactgccga tgtgcgccag cagcacgatg
     2281 agcgcgcact ggcgcatgta ggtgctcttg ccgcc
//
LOCUS       DASSVL010000596         2032 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_395215, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000596 DASSVL010000000
VERSION     DASSVL010000596.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2032)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2032)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2032
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_395215"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..997)
                     /gene="aceE"
                     /locus_tag="VFM52_10355"
     CDS             complement(<1..997)
                     /gene="aceE"
                     /locus_tag="VFM52_10355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007509767.1"
                     /note="E1 component; part of pyruvate dehydrogenase; forms
                     a complex with DlaT and LpdC; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase (acetyl-transferring),
                     homodimeric type"
                     /protein_id="HET8765611.1"
                     /translation="MDQLDDILDQDLDPTETKEWVESLNAVINHDGTERAHYLLEQMV
                     DTTRRAGGHLPFDPTTAYVNTIAPANEAKSPGDAAMEWRIRSIIRWNAMAMVVRTNRK
                     PGKLGGHIASFASSATLYDVGFNHFWRAPSAEHPGDLIFHQGHSSPGIYARSFLEGRI
                     SAEQLDMFRLDTVSHGRSLTSYPHPWLMPDYWQVPTVSMGLGPIQAIYQAQFFKYLEH
                     RGLMPKTDRKVWCFLGDGEVDEPESLGAISLAGREGLDNLIFVVNCNLQRLDGPVRGN
                     GKIIQELEGVFRGAGWNAIKVVWGSYWDPILARDKDGVLRKLMMETVDGEYQACKA"
     gene            complement(1180..>2032)
                     /locus_tag="VFM52_10360"
     CDS             complement(1180..>2032)
                     /locus_tag="VFM52_10360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017463449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016799 - hydrolase activity, hydrolyzing
                     N-glycosyl compounds [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="nucleoside hydrolase"
                     /protein_id="HET8765612.1"
                     /translation="DIAALSVAAGNVGLGHTVRNARVLKDLVHGGFPIHAGCATPLVR
                     APDEDAALVHGADGLGDVGFPEPTASAEAEMAALALLRLTRERPGELTLVALAPLTNI
                     ALALRLDPTLPQRVRRLVVMGGAVNGHGNTGSLPAEFNIGFDPEAAHVVFGAFPAFDL
                     VDWEATLRHGFEDAEFDAWLAAGDERARFFAQVFGKAREYNATHDRSGVVAADALAMA
                     VAIDPSIVTRSETRAVSVELDGRLTRGMTVVDWNSRTPRAAQARIVLDVDQARFAALV
                     RDALGVR"
BASE COUNT          310 a          684 c          714 g          324 t
ORIGIN      
        1 acgccttgca cgcctggtac tcgccgtcga cggtttccat catcagcttg cgcaggacgc
       61 cgtccttgtc gcgggcgaga atcggatccc agtagctgcc ccacaccacc ttgatcgcgt
      121 tccagccggc gccgcggaac acgccctcga gctcctggat gatcttgccg ttgccgcgca
      181 ccgggccgtc gaggcgctgc agattgcagt tgaccacgaa gatgaggttg tcgaggcctt
      241 cgcgcccggc gagcgagatc gcgccgaggg actccggctc gtccacttcg ccgtcgccga
      301 ggaagcacca caccttgcgg tcggtcttcg gcatcagacc gcggtgttcg aggtacttga
      361 agaactgcgc ctggtagatc gcctggatcg gccccaggcc catcgacacg gtcggcacct
      421 gccagtagtc cggcatcagc cacgggtgcg gataggaagt gagcgagcgg ccatgcgaca
      481 ccgtgtcgag ccggaacatg tcgagctgct cggcgctgat ccggccttcg aggaacgaac
      541 gcgcgtagat gccggggctg gaatggccct ggtggaagat caggtcgccg ggatgctcgg
      601 cgctcggcgc acgccagaag tggttgaagc cgacgtcgta cagcgtggcg ctcgatgcga
      661 agctcgcgat gtggccgccg agcttgcccg gcttgcggtt ggtgcgcacc accatcgcca
      721 tcgcgttcca gcggatgatc gagcggatgc gccattccat cgcggcgtcg ccggggctct
      781 tcgcctcgtt cgccggcgcg atcgtgttca cataggcggt ggtcgggtcg aacggcaggt
      841 gcccgccggc gcggcgcgtg gtgtcgacca tctgttcgag cagatagtgc gcgcgttcgg
      901 tgccatcgtg gttgatgacg gcattcagtg attcgaccca ttccttggtt tcggtggggt
      961 cgagatcctg atcgaggatg tcgtcgagct gatccatggg agattctcca cggcgccatg
     1021 cggcgctgat gcttgcggaa ggctgaccgt cggggaaacg ggcagcaaag cccaagtcta
     1081 gcggtcgccc ggcactgctg ccaattggcg gcatgtcgcg catcgaccat gcgccggcgc
     1141 atgcatggac ggctcgggaa accgccgaga aaccgccgct cagcgcacgc cgagcgcgtc
     1201 gcgcaccagc gcggcaaacc gcgcctggtc gacgtccagc acgatgcgcg cctgcgccgc
     1261 gcgcggcgtg cggctgttcc agtcgaccac ggtcatgccg cgcgtcaacc ggccatccaa
     1321 ttcaacggaa acggcgcgcg tttcgctgcg ggtgacgatg gacgggtcga tcgcgacggc
     1381 catcgccagt gcgtcggcgg ccaccacgcc gctgcggtcg tgcgtggcgt tgtactcgcg
     1441 cgccttgccg aacacctggg cgaagaaccg cgcgcgctcg tcgccggcgg caagccaggc
     1501 gtcgaactcg gcgtcctcga aaccgtgccg cagcgtggct tcccagtcga ccaggtcgaa
     1561 cgcgggaaat gcgccgaaca cgacgtgcgc ggcttccgga tcaaagccga tgttgaactc
     1621 ggccggcagg ctgccggtgt tgccgtggcc gttgaccgcg ccgcccatca ccaccagccg
     1681 gcgcacgcgc tgcggcaggg tcgggtcgag gcgcagcgcc agcgcgatgt tggtgagcgg
     1741 tgccagtgcc accagcgtca gctcgcccgg gcgctcgcgg gtcaggcgca gcagcgccag
     1801 cgcggccatt tcggcctcgg cgctggcagt gggttccggg aaaccgacgt cgcccagccc
     1861 atcggcgccg tgcaccaggg cggcgtcctc gtcgggcgcg cgcaccagcg gcgtcgcgca
     1921 gccggcgtgg atggggaacc caccgtgcac gagatccttc agcacccgcg cgttgcgcac
     1981 cgtgtggccg aggccgacgt tgccggcggc gacgctgagc gccgcgatgt cg
//
LOCUS       DASSVL010000597         4720 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_720179, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000597 DASSVL010000000
VERSION     DASSVL010000597.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 4720)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4720)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4720
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_720179"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1346)
                     /gene="mpl"
                     /locus_tag="VFM52_10365"
     CDS             complement(<1..1346)
                     /gene="mpl"
                     /locus_tag="VFM52_10365"
                     /EC_number="6.3.2.45"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014402001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016881 - acid-amino acid ligase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-
                     meso-diaminopimelate ligase"
                     /protein_id="HET8765613.1"
                     /translation="MRLHILGICGTFMGGIAALARELGHEVEGSDANVYPPMSTQLEA
                     LGIRLMDGYAADHLQPAPDRVIVGNALSRGNPAVEYMLDARLHYVSGPQWLGETLLRE
                     RDVLAVAGTHGKTTTTSLLAHLLDSAGMAPGFLIGGVPSNFGVSARLGKRGAPFVIEA
                     DEYDTAFFDKRSKFVHYRPRIAILNNLEYDHADIFPDVAAIQRQFHHLVRTVPGNGRL
                     IVNAHDRHLAEVLAMGCWTPVETFGIGAGDWQARLLADDGTAFEVSRGGEVLGEIHWS
                     MLGRHSVMNALAALAAAAAIGADPRALLPAFSHFESVKRRMELVGEAGGVRVYDDFAH
                     HPTAIATTLAGLRAKVGAARILVGIEPRSNSMRLGAHAAALAPSLADADAVVFLQRPN
                     LPWDEHRVTDALGGRGSIATSVEALIESLHGQARPGDHVVFMSNGGFENAPRRFVAR"
     gene            complement(1435..2007)
                     /locus_tag="VFM52_10370"
     CDS             complement(1435..2007)
                     /locus_tag="VFM52_10370"
                     /EC_number="2.7.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007514209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0019205 - nucleobase-containing compound
                     kinase activity [Evidence IEA];
                     GO_process: GO:0006139 - nucleobase-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate kinase"
                     /protein_id="HET8765614.1"
                     /translation="MRLVLLGAPGSGKGTQAARLKTDLGVPHISTGDMLRAAVKAGTP
                     VGLKAKAVMEAGKLVSDDILLAMLEERLAQPDAKSGFILDGYPRNLAQAAALDELLAR
                     IGKPLGAVVKLDVPNATIIGRCEIRFAAEHRKDDNPEVVRDRLKVYAEQTAPVADFYA
                     QRGKLQVVDGVGALDEVTARVKQALQAAAA"
     gene            2154..3422
                     /locus_tag="VFM52_10375"
     CDS             2154..3422
                     /locus_tag="VFM52_10375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012481185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phosphofructokinase"
                     /protein_id="HET8765615.1"
                     /translation="MPKRPLPSGRLLYAQSGGVTAVINATAAGVIETARAAGVKAYAA
                     RNGILGALREDLIDTSKESAAAIAALRHTPGGAFGSCRVKLKSLDANRAEYERLIAVL
                     RAHDIRWFLYNGGNDSADTALKISQIGKALGYDVRGIGVPKTVDNDLAVTDCCPGFGS
                     VAKYTAVSTLEASIDLASMAETSTKVFILEVMGRHAGWIAAAAGLAGQGADEPPHLIL
                     FPENAFDEAAFLAKVKATVERVGWCTVVASEGVRDAAGKFLADGGTRDAFGHVQLGGV
                     APTLAALVKAKLGYKVHWALPDYLQRSARHWASKTDAEQAYAVGKAAVDYALAGENAV
                     MPVIVRTSDVPYRWKITAAPLAKIANREKKLPRNFVTRDGYGITAAARRYLAPLIAGE
                     LPPPTGKDGLPKYVRLKNVAVAKKLPAWAP"
     gene            3606..3941
                     /locus_tag="VFM52_10380"
     CDS             3606..3941
                     /locus_tag="VFM52_10380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019398295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RcnB family protein"
                     /protein_id="HET8765616.1"
                     /translation="MTKTLCSVLVALSLFTVSNAALAGPGPDRDHDRHGHVHDRGHRG
                     NGHYRKPRRGHDWRRGHRYGGPIYVVRDYRHYHLRRPPRGYGWVRADNNDYLLVALAT
                     GIIMDIALR"
     gene            4086..>4720
                     /locus_tag="VFM52_10385"
     CDS             4086..>4720
                     /locus_tag="VFM52_10385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011038412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004427 - inorganic diphosphate
                     phosphatase activity [Evidence IEA];
                     GO_function: GO:0009678 - diphosphate hydrolysis-driven
                     proton transmembrane transporter activity [Evidence IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/proton-translocating pyrophosphatase"
                     /protein_id="HET8765617.1"
                     /translation="MLQQLGWWIVLACAVVAIIYGAVSARWVLARPAGNARMQEIAGA
                     VQEGARAYLNRQYMTIALVGAILFVLIGFFLSWPTAIGFLIGAVLSGATGYIGMNVSV
                     RANVRTAEAARGGLKAAMNVAFRGGAITGMLVVGLALLGVTGYWLILQASGMPTDEAL
                     HALVGLAFGSSLISIFARLGGGIFTKGADVGADLVGKVEAGIPEDDPRNPAV"
BASE COUNT          722 a         1671 c         1639 g          688 t
ORIGIN      
        1 cgcgcgacga aacggcgcgg cgcattctcg aacccgccat tggacatgaa caccacgtgg
       61 tcgccggggc gcgcctgccc gtgcagcgat tcgatcagcg cctcgacgct ggtggcgatg
      121 ctgccgcgcc cgcccagcgc gtcggtgacg cggtgctcgt cccacggcag gttcgggcgc
      181 tgcaggaaca ccaccgcgtc ggcatccgcc agcgagggcg caagcgccgc cgcgtgcgcg
      241 ccgagacgca tcgagttcga acgcggctcg atgccgacga ggatgcgcgc ggcgcccact
      301 ttcgcacgca gcccggcgag cgtcgtcgcg atcgccgtcg ggtgatgcgc gaaatcgtcg
      361 tacacccgca cgccgccggc ctcgccgacc agctccatgc gccgcttgac gctctcgaag
      421 tggctgaacg ccggcagcag cgcgcgcgga tcggcgccga tcgcggccgc cgcagccagc
      481 gccgccagcg cgttcatcac gctgtggcgg ccaagcatcg accagtggat ctcgcccagc
      541 acctcaccgc cgcgcgacac ctcgaacgcg gtgccgtcgt cggccagcag gcgcgcctgc
      601 cagtcaccgg cgccgatgcc gaaggtctcg accggcgtcc agcaccccat cgccagcacc
      661 tcggccaagt gcctgtcgtg cgcgttgacg atcagccggc cgttgccggg cacggtgcgc
      721 acgaggtggt ggaactggcg ctggatcgcg gcgacgtcgg gaaagatgtc ggcgtggtcg
      781 tattcgaggt tgttgaggat cgcgatgcgc gggcggtaat gcacgaactt cgagcgcttg
      841 tcgaagaacg cggtgtcgta ctcgtcggcc tcgatgacga acggcgcccc acgcttgccc
      901 agccgcgcgg aaaccccgaa gttgctcggc acgccgccga tcaggaaccc cggcgccatg
      961 ccggcgctgt cgagcaggtg cgcaagcagg ctggtggtgg tcgtcttgcc gtgggtgccg
     1021 gccaccgcga gcacgtcgcg ctcgcgcagc agcgtctcgc ccagccattg cgggccggac
     1081 acgtagtgca ggcgcgcgtc gagcatgtat tccactgccg ggttgccgcg gctcagcgcg
     1141 ttgccgacga tcacgcgatc cggcgcgggc tgcagatgat cggccgcata gccgtccatc
     1201 aggcggatgc cgagcgcttc gagctgggtg ctcatcggcg ggtagacgtt ggcgtcggag
     1261 ccttcgacct cgtggccgag ctcgcgcgcc agggcggcga tgccgcccat gaaggtgccg
     1321 cagatgccga gtatgtgcag acgcatggtg ccggtcctca tgacgggcgc cggcatggcg
     1381 cgggcacgcc cgcgatgttg cgatggcgcc ggcagcgtgg ccggcgacga tgaatcaagc
     1441 agccgcggcc tgcagcgcct gcttgacgcg cgcggtgacc tcgtcgagcg cgccgacgcc
     1501 gtccaccacc tgcaacttgc cgcgctgggc gtagaagtcg gccaccgggg cggtctgctc
     1561 ggcgtacacc ttcaggcggt cgcgcaccac ctcggggttg tcgtccttgc ggtgctccgc
     1621 cgcgaagcgg atttcgcagc ggccgatgat ggtcgcgttc ggcacatcga gcttgaccac
     1681 cgcaccgagc ggcttgccga tgcgcgccag caattcgtcg agcgcggcgg cctgcgcgag
     1741 gttgcgcgga tagccgtcga ggatgaaacc gcttttcgcg tcgggctggg ccaggcgctc
     1801 ttcgagcatg gccagcagga tgtcgtcgga aaccagtttg ccggcctcca tcaccgcctt
     1861 ggccttgagg ccgaccgggg tgccggcctt gaccgcggcg cggagcatgt cgcccgtgga
     1921 aatgtgcggc acgcccagat cggttttcag ccgggcagcc tgggtgccct tgcccgagcc
     1981 gggcgcaccg agtagcacga gtcgcatatc gctccgcaat ggcggcgcca cgccgccgtt
     2041 tccgaggaaa agtggcctgc acgttagcgt ttgcgggcgg ttcgcgtcaa accggaatca
     2101 tgcgtggcgc gggaccggat gcgcgatact gcccgcccca caaggagacc atcatgccga
     2161 agcgtccgct cccgtccggc cggctgctgt atgcccagtc cggcggcgtc accgccgtca
     2221 tcaacgccac cgcggccggc gtgatcgaga ccgcgcgcgc ggccggcgtc aaggcgtacg
     2281 cggcacgcaa cggcatcctc ggcgccttgc gcgaggacct gatcgacacc tcgaaggagt
     2341 ccgcggccgc catcgccgcg ctgcgccaca cgccgggcgg cgcgttcggc tcgtgccgcg
     2401 tgaagctgaa atcgctcgac gcgaaccgcg ccgaatacga gcgcctgatc gccgtgctgc
     2461 gcgcgcacga catccgctgg ttcctctaca acggcggcaa cgattcggcc gacaccgcgc
     2521 tcaagatctc gcagatcggc aaggcgctgg gctacgacgt gcgcggcatc ggcgtgccca
     2581 agacggtgga caacgacctc gccgtcaccg actgctgccc cggtttcggt tcggtggcga
     2641 aatacaccgc ggtgtccacg ctcgaagcga gcatcgacct ggcctcgatg gcggaaacct
     2701 cgaccaaggt gttcattctc gaagtgatgg gccgccacgc gggctggatc gccgccgccg
     2761 ccggcctcgc cggccagggc gcggatgaac cgccgcacct gatcctgttt ccggaaaacg
     2821 cgttcgacga agcggcgttc ctcgccaagg tcaaggccac ggtggagcgc gtcggctggt
     2881 gcaccgtcgt cgcttccgag ggcgtgcgcg acgcggccgg caaattcctc gccgacggcg
     2941 gcacccgcga cgcgtttggc cacgtgcagc tcggcggcgt cgcgccgacg ctggcggcgc
     3001 tggtcaaggc caagctcggc tacaaggtgc actgggcgct gccggattac ctgcagcgct
     3061 ccgcgcgcca ctgggcgtcg aagaccgacg ccgagcaggc ctacgcggtg ggcaaggcgg
     3121 cggtcgatta cgccctggcc ggcgagaacg cggtgatgcc ggtgatcgtg cgcaccagcg
     3181 atgtgcccta ccgctggaag atcaccgcgg cgccgctggc gaagatcgcg aaccgcgaga
     3241 aaaaactgcc caggaacttc gtcacccgcg acggctacgg catcaccgcc gccgcacggc
     3301 gttacctcgc gccgctgatc gccggcgaat tgccgccgcc gaccggcaag gacgggctgc
     3361 cgaaatatgt gcggttgaag aacgtggcag tggcgaaaaa gctgccggcg tgggcgccgt
     3421 gagccgcgga cgacaccgct acctgccggc cggcaagtag cggtcgccgc cagcgcacgc
     3481 tgctggcggc cccgtctgac tggcggctga aaccgccggg acacggcaca ctcggggttc
     3541 agacgcaact tcctacgatc aggccatctg cccgcgtggc gggcacggac cgaggaggaa
     3601 ccgccatgac caagaccctg tgcagcgtgc tggtggcatt gtcgctgttc accgtgagca
     3661 acgccgccct ggccggcccc ggacccgatc gtgaccacga ccgccacggc cacgtgcacg
     3721 accggggcca ccgtggcaac ggccactacc gcaaaccgcg tcgcggccac gactggcgac
     3781 gcggccaccg ctacggcggc ccgatctacg tggtgcgcga ttatcgccac taccacctgc
     3841 gccgcccgcc gcgcggctat ggctgggtgc gcgccgacaa caacgattac ctgctggtcg
     3901 cactcgccac cggcatcatc atggacatcg cgctgcgctg aggcagccgc gcacgggtcg
     3961 cgcgccgcga tccgtgcgcc ccggcgccga cgctgcggcg cacaacggga tacacccaaa
     4021 gccctgccta tactccccgc cagtcgcccg caacgggcgg cctatcacga catggggagg
     4081 ctccgatgct gcagcagctt ggctggtgga tcgtgcttgc gtgtgcggtg gtggcaatca
     4141 tctacggggc ggtatcggcg cgctgggtgc tggcgcgacc ggccggcaac gcacgcatgc
     4201 aggagatcgc aggcgccgtg caggaaggcg cccgcgccta tctcaaccgg cagtacatga
     4261 cgatcgcgct ggtcggcgca atcctgttcg tgctgatcgg cttcttcctg tcgtggccga
     4321 cggcgatcgg cttcctcatc ggcgcggtgc tctccggcgc caccggctac atcggcatga
     4381 acgtgtcggt gcgcgcgaac gtgcgcaccg ccgaggccgc acgtggcggg ctcaaggcgg
     4441 cgatgaacgt cgccttccgc ggcggcgcga tcaccggcat gctggtggtc ggcctcgccc
     4501 tgctcggcgt caccggctac tggctgatcc tgcaggccag cggcatgccg accgacgaag
     4561 cgctgcacgc actggtcggc ctcgccttcg gcagctcgct gatctcgatc ttcgcgcgcc
     4621 tgggcggcgg catcttcacc aagggtgcgg acgtcggcgc cgacctggtc ggcaaggtcg
     4681 aggccggcat tcccgaggac gatccgcgca atccggcagt
//
LOCUS       DASSVL010000598         3903 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_734344, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000598 DASSVL010000000
VERSION     DASSVL010000598.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3903)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3903)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3903
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_734344"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1247
                     /locus_tag="VFM52_10390"
     CDS             <1..1247
                     /locus_tag="VFM52_10390"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HET8765618.1"
                     /translation="PPAAWRAGLVAGDPAVYIFTSGTTGLPKAAIVSHARWLITGDVM
                     QVTTGLGDQDCFYAFLPLYHGAASLSAAATAFTAGASLLLRRKFSRRAFWRDVRTHHV
                     TACQYVGEICRFLLTEPPRADDREHSLRVMVGAGLAPEIWEQWVARFGPMDIFEGWGA
                     TEANANVINVDNRIGSCGRVPFWEKTNLRLVRYDVASGTYPRGPDGFLQLAGVDEPGE
                     AIGMIIDMPDIVAGRFEGYTSPAATERKTLRDVFRKGDAWWASGDLLRCDADGYCWFV
                     DRIGDTFRWNSENVSTTEVADQLGDFPGMDSITVYGVQVPGHEGRAGMAAVVMRDGHA
                     FDPTAFWRLVDARLPRYAAPLFVRVPPAADMTGNYKLRKVDLQREGYDRALVGDPLYV
                     RDDAAQAYLPLTSETLGRVLHG"
     gene            1240..2298
                     /locus_tag="VFM52_10395"
     CDS             1240..2298
                     /locus_tag="VFM52_10395"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HET8765619.1"
                     /translation="MADGAPTTISYPLAPPPADGSVVEIAPGVLWARMPMPMKLDHIN
                     VYLLRGERGWVVVDTGLNTARCRELWQHIAATHLDGLPITLLVCTHWHYDHAGLAAWF
                     VEHFGVRVAMTLGEYFTLRAYAQPAPDPLPPAQRDFYRRAGLDDAGIDQLFAGVRHDP
                     FTAPAPRSYRRLRGGDALAIGTRRWQVVIGEGHSPEHACLYDADARLLLAGDQLLPRI
                     TSNVLVSDIEPEANPLALWLASLTRLERLAADTLVLPSHQEIFRGLAVRTREIADHHA
                     HQLDVLRGCLAARPEASAHIAMQVMFPRRRGPFDDMLALGETLAHLAWLRDAGEVRRT
                     LDAQGIHRFALTANGEVP"
     gene            2295..3479
                     /locus_tag="VFM52_10400"
     CDS             2295..3479
                     /locus_tag="VFM52_10400"
                     /inference="COORDINATES: protein motif:HMM:NF012656.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HET8765620.1"
                     /translation="MSELDDFRAATRAWLEANCPPAMRRPITADEMVWGGAHVTFGSA
                     DQRTWFERMRERGWFAPGWPREYGGGGLDRRQQQVLDEEMRRLHCRQPQYNLGIWMLA
                     PVLLAHGTHEQKLEHLLPMAEGRVRWCQGFSEPNAGSDLASLKTRAEPDGDDFVVNGS
                     KIWTSYGNFADWMYALVRTDPTAKKQAGISFVLIDMRSPGVSVKPIELISGKSSFCEV
                     FFDNVRVPRRQLVGELNHGWTLAKELLQHERAAMSKFAEGAAPSLDPLATVQAWLAAN
                     PDDPLVPELRTRLAKLLMDAQAFALTHRRVTEQALAGRDVKGPAAIMKLVQTEQEVAK
                     YALLVDVMGQRGLVWEGAPSTPLEHDVDRGWLLAKTYTIAGGSSEVQLNIIAKRVLGL
                     PA"
     gene            3490..>3903
                     /locus_tag="VFM52_10405"
     CDS             3490..>3903
                     /locus_tag="VFM52_10405"
                     /inference="COORDINATES: protein motif:HMM:NF014790.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HET8765621.1"
                     /translation="MSLLLNDEQTQLRETAHDFLGERSPVARQRALRNGGDALGFDPA
                     LWREATDMGWTAAVFPEAFGGLDFGWPGLAAVFEECGRTLAALPLLSHVVLAGGAVLA
                     LGDVGQQQRWLPGIVAGAQRFALAHEESARHAPTQV"
BASE COUNT          570 a         1367 c         1383 g          583 t
ORIGIN      
        1 atccaccggc cgcatggcgc gccggactgg tggccggcga cccggcggtc tacatcttta
       61 cctcgggcac caccggcttg ccgaaggccg cgatcgtcag ccatgcgcgc tggctgatca
      121 ccggcgacgt gatgcaggtg accaccgggc tgggcgacca ggactgcttc tatgccttcc
      181 tgccgctgta ccacggcgcg gcctcgttgt cggcggcggc caccgcgttc accgccggcg
      241 ccagcctgct gctgcggcgc aagttcagcc gccgcgcgtt ctggcgcgac gtgcgcacgc
      301 accacgtcac cgcgtgccag tacgtgggcg agatctgccg cttcctgctc accgagccac
      361 cgcgcgcgga cgaccgcgag cacagcctgc gggtgatggt cggtgctggc ctggcgccgg
      421 aaatctggga gcaatgggtg gcccgcttcg gcccgatgga cattttcgaa ggctggggcg
      481 ccaccgaggc gaacgccaac gtcatcaacg tcgacaaccg catcggcagt tgcggccgcg
      541 tgccgttctg ggaaaagacc aacctgcgcc tggtgcgcta cgacgtggcc agcggcactt
      601 atccgcgcgg gccggatggc ttcctgcagc ttgccggggt cgacgagccg ggcgaggcga
      661 tcggcatgat catcgacatg cccgacatcg tggccggccg cttcgagggc tacacctcgc
      721 cggcggccac cgagcgcaag acgctgcgcg acgtgttccg caagggcgac gcgtggtggg
      781 cctcgggcga cctcctgcgc tgcgacgcgg acggctattg ctggttcgtc gaccgcatcg
      841 gcgacacctt ccgctggaac agcgagaacg tctccaccac cgaggtggcc gaccagctcg
      901 gcgatttccc gggcatggat tcgatcaccg tctacggcgt gcaggtgccc ggccacgagg
      961 gccgcgccgg catggctgcg gtggtgatgc gcgacggcca cgcgttcgac ccgaccgcgt
     1021 tctggcgcct ggtggatgcc cgcctgccgc gctacgccgc gccgctgttc gtgcgcgtgc
     1081 cgcctgccgc cgacatgacc ggcaactaca agctgcgcaa ggtcgacctg cagcgcgaag
     1141 gctacgatcg cgcgctggtc ggcgacccgc tctacgtgcg cgacgacgcc gcgcaggcgt
     1201 atctgccgct gaccagcgaa acgctgggcc gggtgctgca tggctgacgg cgcgcccacc
     1261 accatcagct atccgctggc cccgccgccg gccgacggct cggtggtgga gatcgcaccc
     1321 ggcgtgctgt gggcgcgcat gccgatgccg atgaagctcg accacatcaa cgtctacctg
     1381 ctgcgcggcg aacgcggctg ggtggtggtg gacaccgggc tcaacaccgc gcgctgccgc
     1441 gagttgtggc agcacatcgc ggccacccac ctggacggcc tgccgatcac gctgctggtg
     1501 tgcacgcact ggcactacga ccatgccggg cttgccgcgt ggttcgtcga gcacttcggc
     1561 gtgcgtgtgg cgatgacgct cggcgaatat ttcaccctgc gcgcctacgc gcagccggcg
     1621 cccgatccgc tgccgccggc gcagcgcgac ttctaccgtc gcgccgggct cgacgacgcc
     1681 ggcatcgacc agctgtttgc cggcgtacgc cacgacccgt tcaccgcacc ggcgccgcgc
     1741 agttatcggc gcctgcgcgg tggcgacgcg ctggccatcg ggacgcggcg ctggcaagtg
     1801 gtgatcggcg agggccactc gccggagcat gcctgcctgt acgacgccga cgcgcgcttg
     1861 ctgctggccg gcgaccagct gctgccgcgc atcacctcga acgtgctggt gtccgacatc
     1921 gagccggagg cgaacccgct ggcgctgtgg ctggcctcgc tgacgcggct ggaacgcctt
     1981 gccgccgaca ccctggtgct gccgtcgcac caggagattt tccgtggctt ggcggtgcgc
     2041 acgcgcgaga tcgccgacca tcacgcgcac cagctcgacg tgctgcgagg ctgtctggcg
     2101 gcgcgaccgg aggccagcgc acacatcgcg atgcaggtca tgtttccgcg ccggcgcggg
     2161 ccgttcgacg acatgctggc gctgggcgag accctggcgc atctggcatg gttgcgcgac
     2221 gccggcgaag tgcgccgcac gctggatgcg cagggtatcc atcggtttgc gctgaccgcc
     2281 aacggggagg tgccatgagc gaactcgacg atttccgcgc cgcgacccgc gcctggctgg
     2341 aggccaactg cccgccggcg atgcgccggc cgatcaccgc cgacgagatg gtgtggggcg
     2401 gggcgcacgt cacttttggc agcgccgacc agcgcacctg gttcgagcgc atgcgcgaac
     2461 gcggctggtt cgcaccgggc tggccgcgcg aatacggcgg cggcgggctc gatcgccgcc
     2521 agcagcaggt gctggacgag gaaatgcgcc gcctgcattg ccgccagccg caatacaacc
     2581 tcggcatctg gatgctggcg ccggtgctcc tggcgcacgg cacgcacgag cagaaactcg
     2641 aacacctgct gccgatggcc gaaggccggg tgcgctggtg ccagggcttt tccgaaccga
     2701 acgccggctc cgacctggcc agcctcaaga cgcgcgccga gccggacggc gacgacttcg
     2761 tcgtcaacgg ttccaagatc tggaccagct acggcaactt tgccgactgg atgtacgcgc
     2821 tggtgcgcac cgacccgacg gcgaagaaac aggccggcat cagcttcgtg ctgatcgaca
     2881 tgcggagccc cggcgtcagc gtgaaaccga tcgagctgat cagcggcaag tcgagtttct
     2941 gcgaggtgtt tttcgacaac gtgcgggtgc cgcgccggca gctggtcggc gagctcaacc
     3001 acggctggac gctggccaag gagctgctgc agcacgagcg cgcggcgatg agcaagttcg
     3061 ccgaaggcgc cgcgccctcg ctcgatccgc tggccacggt gcaggcctgg ctggcggcca
     3121 accccgacga cccgctcgtg cccgagctgc gtacccggct ggccaagttg ctgatggatg
     3181 cgcaggcgtt tgcactcacc catcgccggg tgaccgagca ggcactggcc gggcgggacg
     3241 tgaaaggccc ggccgcgatc atgaagctgg tgcagaccga gcaggaagtg gccaagtacg
     3301 cgctcctggt cgacgtcatg ggccagcgcg ggctggtgtg ggagggcgcg ccctccacgc
     3361 cgctggagca cgacgtggac cgcggctggc tgctggccaa gacctacacc atcgccggcg
     3421 gcagcagcga ggtgcagctc aacatcatcg ccaagcgcgt gcttggcctg cccgcatgag
     3481 gccgtcgcga tgagcctgtt gttgaacgac gagcagaccc agttgcgcga gaccgcgcac
     3541 gattttctcg gcgagcgctc gccggtggcg cgccagcgcg cactgcgcaa cggcggcgat
     3601 gcgctcggct tcgaccccgc gctgtggcgc gaggcgaccg acatgggctg gaccgccgcg
     3661 gtgtttcccg aagccttcgg cggcctcgat ttcggctggc cggggctggc cgcggtgttc
     3721 gaggagtgcg gccgcacgct ggccgcgctg ccgctgctgt cccacgtggt gctcgccggc
     3781 ggcgcggtgc tggcactggg cgatgtcggc cagcagcaac gctggttgcc gggaatcgtc
     3841 gccggcgcgc agcggtttgc gctggcgcac gaggaatccg cccgccacgc gccgacccag
     3901 gta
//
LOCUS       DASSVL010000599         2220 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_480063, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000599 DASSVL010000000
VERSION     DASSVL010000599.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2220)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2220)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2220
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_480063"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            281..418
                     /locus_tag="VFM52_10410"
     CDS             281..418
                     /locus_tag="VFM52_10410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8765622.1"
                     /translation="MPQRNSHRSHAETTRLATVAGLLQLRGTLLLALVLVLLITNGGA
                     G"
     gene            533..2149
                     /locus_tag="VFM52_10415"
     CDS             533..2149
                     /locus_tag="VFM52_10415"
                     /EC_number="2.3.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007808739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003852 - 2-isopropylmalate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009098 - leucine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0019752 - carboxylic acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-isopropylmalate synthase"
                     /protein_id="HET8765623.1"
                     /translation="MENPQHDSPSEPVGAVAEHVRIFDTSLRDGEQTPGFSMDRRAKL
                     RMAQMLETLGVDVLEAGFPAASPDDFAAVAQIAGTLQATTACALARCVPGDIDAAGRA
                     LAAARRSRIHVFISTSPLHREHKLGMSRQQVLEAAVAGVERARGLCHEVEFSAEDAMR
                     TEPAFLAEVFSAALAAGASTLNVPDTVGYMTPTEIAERFAWLRRHVRGAERAVFSSHC
                     HDDLGLAVANSLAAIGAGARQVECTINGIGERAGNAALEEVVMALKVRAAHFGVDTRI
                     DTRKLYPASRLLCQLTGQHVPRNKAIVGDNAFAHESGIHQHGMLRHRGTYEIMRPEDV
                     GIAETKLVLGKHSGRAALRARLESLGHTSDEAALEAIFARFKTLADKKREVHDEDLDA
                     LALGHDPEAQGPWRLLQLGTSTHLGGASASVKLAHDDGREVGEAAIGDGPVDAVLRAI
                     ERATGSTLDVTEFQVRAVSEGGDAQGQARLVARHAGRDWNGDGVSTDIVEATAQAALA
                     IVNRIERHAPVTPATASPTPRNTKALGATA"
BASE COUNT          389 a          817 c          726 g          288 t
ORIGIN      
        1 gctggcgctg cgcgcgagct ggcaagtcgc gcccgcgtgg caggtcgagg gcagcctcac
       61 caacgtcttc gaccaccgct acgagacggc gtattacttc aaccagcccg gccgcacctg
      121 gtcgctgacg ctgcgctacc accccgcgcg gctctgatgc cgacatcgct ggacgtcctg
      181 ccgaaaccgg catggacgtc cagccgtcca aatgaaattt ccggatagtc acaaaaaaaa
      241 ctgttgacag acgccaacga cctgccttag ggtcgacgac atgccgcagc gcaacagcca
      301 ccgcagccac gccgaaacga cccgtctcgc gacggtcgcc ggcctgctgc agcttcgcgg
      361 cacgctcctt cttgcccttg tactcgtact ccttattacc aacggaggtg cgggctgagg
      421 gcatgtgtcc aggtagctag aaccaagaac ctgaaaacac ccgaagaacc ccgcaccagc
      481 aatggcgcgg ggttttttgt tgccagaagc ctgttcccac gggagccaag cgatggaaaa
      541 cccgcagcac gacagcccaa gcgaacccgt cggcgcagtg gccgagcacg tgcgcatctt
      601 cgacaccagc ctgcgcgacg gcgagcagac gcccggcttc tcgatggatc ggcgcgccaa
      661 gctgcgcatg gcgcagatgc tcgaaacgct gggcgtggac gtgctcgagg cgggttttcc
      721 ggccgcctcc ccggatgatt ttgctgcagt cgcacagatc gccggaacgc tgcaggccac
      781 caccgcgtgc gcgctggcgc gctgcgtgcc cggcgacatc gacgccgccg gccgcgcgct
      841 ggccgccgcg cgccgctcgc gcatccacgt gttcatctcc accagtccgt tgcaccgcga
      901 gcacaagctg ggcatgagcc ggcagcaggt gctggaggcc gccgtggccg gcgtggagcg
      961 cgcgcgcggc ctgtgccacg aggtggagtt ctccgccgag gatgccatgc gcaccgagcc
     1021 ggcgttcctc gccgaggtgt tcagcgccgc gctggccgcc ggcgccagca cgctcaacgt
     1081 gcccgacacc gtgggctaca tgacacccac cgagatcgcc gagcgcttcg cctggctgcg
     1141 ccggcacgtg cgcggcgccg agcgcgcggt gttctccagc cactgccacg acgacctcgg
     1201 cctcgccgtg gccaacagcc tcgccgccat cggcgcgggc gcgcgccagg tggaatgcac
     1261 catcaacggc atcggcgagc gcgccggcaa cgccgcgctg gaggaagtgg tgatggcgct
     1321 gaaggtgcgc gccgcgcatt tcggcgtcga cacccgcatc gacacgcgca agctctaccc
     1381 ggcctcgcgc ctgctgtgcc agctcaccgg ccagcatgtg ccgcgcaaca aggccatcgt
     1441 gggcgacaac gccttcgcgc acgaatcggg catccaccag cacggcatgc tcaggcaccg
     1501 cggcacctac gaaatcatgc gccccgagga cgtcggcatc gccgagacga aactggtgct
     1561 gggcaagcac tccggccggg ccgcgctgcg cgcgcggctg gaatcgctgg gccacacgtc
     1621 cgacgaggcc gcgctggagg cgatcttcgc gcgcttcaag acgctggccg acaagaagcg
     1681 cgaagtgcac gacgaagacc tggacgccct cgcgctgggc cacgacccgg aagcgcaggg
     1741 cccgtggcgc ctgctgcagc ttggcaccag cacgcacctg ggcggtgcct ccgcctcggt
     1801 gaagctggcg cacgacgacg gccgcgaggt gggcgaggcc gccatcggcg acggcccggt
     1861 ggacgcggtg ctgcgcgcga tcgagcgcgc caccggcagc acgctggacg tcaccgaatt
     1921 ccaggtgcgc gcggtcagcg agggcggcga cgcccagggc caggctcggc tggtcgcccg
     1981 ccatgccggc cgcgactgga acggcgacgg cgtcagcacc gacatcgtcg aagccaccgc
     2041 gcaggccgcg ctggccatcg tcaatcgcat cgaacgacac gcgccggtca cgccagcgac
     2101 cgcatcccca accccacgca acaccaaagc cctgggagcc accgcatgag tacgcccttc
     2161 gtctggcaca acggccggat caagccgtgg gccgatgcca acgtccatgt cagcacgcac
//
LOCUS       DASSVL010000600         3229 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_352809, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000600 DASSVL010000000
VERSION     DASSVL010000600.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3229)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3229)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3229
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_352809"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..467
                     /locus_tag="VFM52_10420"
     CDS             <1..467
                     /locus_tag="VFM52_10420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007082673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="polynucleotide adenylyltransferase PcnB"
                     /protein_id="HET8765624.1"
                     /translation="AFLFAVLLWGEVRDLAHGWIAQGVDANEAWPRAAQRVVGEQCQR
                     VAIPRRFTFAMEEIWSLQPRFEQVQRKKVMRLLAHPRFRAAFDFLLLRANESPAMRQL
                     GEWWAHAQQLPPDVLAAALPTQAGAAEPDPGVPVHKPPRRRRRRSSARNKPA"
     gene            464..946
                     /gene="folK"
                     /locus_tag="VFM52_10425"
     CDS             464..946
                     /gene="folK"
                     /locus_tag="VFM52_10425"
                     /EC_number="2.7.6.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008439293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003848 -
                     2-amino-4-hydroxy-6-hydroxymethyldihydropteridine
                     diphosphokinase activity [Evidence IEA];
                     GO_process: GO:0009396 - folic acid-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-amino-4-hydroxy-6-
                     hydroxymethyldihydropteridine diphosphokinase"
                     /protein_id="HET8765625.1"
                     /translation="MTTAYVALGSNLGDPRQQVLDAFDALAGMPHSRLLARSRLYRTP
                     PWGVLDQPWFVNAAARLDTALEPPALLDALQAIERRAGRVRGVRYGPRTLDLDLLHMD
                     GVRCADARLTLPHPRIAERAFVLLPLAELAPDLELPGQGRVAELLAAVDTAGCALLAE
                     "
     gene            1038..1823
                     /gene="panB"
                     /locus_tag="VFM52_10430"
     CDS             1038..1823
                     /gene="panB"
                     /locus_tag="VFM52_10430"
                     /EC_number="2.1.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017460904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003864 - 3-methyl-2-oxobutanoate
                     hydroxymethyltransferase activity [Evidence IEA];
                     GO_process: GO:0015940 - pantothenate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-methyl-2-oxobutanoate
                     hydroxymethyltransferase"
                     /protein_id="HET8765626.1"
                     /translation="MPLLHAMKAEGRRIAMLTAYDFSMASQLEAAGIDVALVGDSLGM
                     VIQGHASTLPVTLEHMVYHTAAVARGLSTTLLIADLPFMADRDVPHVLEAGTRLVGEA
                     GAAMVKLEGGAPHILDAIAALTARAIPVCAHLGLTPQSVHKFGGFRIQGREPSAAEHV
                     LAQAKAVQAAGADLLVLEGVPATLGEQVTQALAIPVIGIGAGPHCDGQVLVCYDMLGI
                     TPGKRPKFSKDFLAGRGSVAEAIAAYAEAVRDGSFPAAEHSFN"
     gene            1836..2681
                     /gene="panC"
                     /locus_tag="VFM52_10435"
     CDS             1836..2681
                     /gene="panC"
                     /locus_tag="VFM52_10435"
                     /EC_number="6.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015448205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004592 - pantoate-beta-alanine ligase
                     activity [Evidence IEA];
                     GO_process: GO:0015940 - pantothenate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pantoate--beta-alanine ligase"
                     /protein_id="HET8765627.1"
                     /translation="MQTVQDAQALRAAIHGWREKGQTVALVPTMGNLHAGHYSLVRLA
                     RERAERVVASVFVNPTQFGPNEDYTRYPRTLAQDQAGLAEHGCDLLFAPEVATVYPFG
                     AEHGVSVHVPQVTEMLEGAHRPGHFDGVATVVAKLFNLVQPDLAVFGQKDYQQLKVIE
                     RMVRDLALPVKVLGAPIQRADDGLALSSRNQYLSAAERALAPQIHQTLRLMQELIGEG
                     HACHAVELVATARLERAGFMPDYTAIRRADDLGVPEEHARQGLVALIAARLGTTRLID
                     NLQLA"
     gene            complement(2802..2948)
                     /locus_tag="VFM52_10440"
     CDS             complement(2802..2948)
                     /locus_tag="VFM52_10440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET8765628.1"
                     /translation="MNMLSSMTAYLQKRSFELPIIEPLPLRRNNDRAAWQAGPTVGLK
                     PDLQ"
     gene            2929..>3229
                     /gene="panD"
                     /locus_tag="VFM52_10445"
     CDS             2929..>3229
                     /gene="panD"
                     /locus_tag="VFM52_10445"
                     /EC_number="4.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014160202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004068 - aspartate 1-decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0015940 - pantothenate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate 1-decarboxylase"
                     /protein_id="HET8765629.1"
                     /translation="MLLNMFKSKIHRATVTHAELQYEGSIAIDGDLLDACGIREYEQI
                     HAWDVSNGKRFVTYALRAEEGSGIISVNGSAAHRAQPGDLVIIAAFVGLSEAEAAV"
BASE COUNT          463 a         1089 c         1176 g          501 t
ORIGIN      
        1 cggccttcct gttcgcggtg ctcctgtggg gcgaagtgcg cgacctggcg catggctgga
       61 tcgcgcaggg cgtggatgcc aacgaggcct ggccgcgcgc cgcgcagcgc gtggtgggcg
      121 agcagtgcca gcgcgtggcg attccgcgcc ggttcacctt cgccatggag gaaatctggt
      181 cgttgcagcc gcgcttcgag caggtgcagc gcaagaaggt gatgcgcctg ctcgcgcatc
      241 cgcggtttcg cgccgcgttc gatttcctgc tgctgcgcgc gaacgagtcg ccggcgatgc
      301 gccagctcgg cgagtggtgg gcacatgccc agcagttgcc gccggacgtg ctggcggccg
      361 ccttgccgac ccaggccggc gccgccgagc cggatcccgg cgtgcccgtg cacaagccgc
      421 cgcgccgtcg tcggcgccgt tcatcagcgc ggaacaagcc ggcgtgacga cggcgtacgt
      481 ggcgctcggc agcaatcttg gcgatccacg gcagcaggta ctcgacgcct tcgatgcgct
      541 ggcaggcatg ccgcactcgc ggttgctggc gcgctcgcgc ctgtatcgca ccccgccgtg
      601 gggcgtgctc gaccagccgt ggttcgtgaa tgccgccgcg cgtttggaca ccgcactgga
      661 gccgcccgcg ctgctcgatg cgctgcaggc gatcgagcgt cgtgccgggc gtgtgcgtgg
      721 cgtgcgctac gggccgcgca cgctcgatct cgatctcttg cacatggacg gtgtgcgctg
      781 cgccgatgcg cggctgacgc tgccgcaccc gcgcatcgcc gaacgcgcct tcgtgctgtt
      841 gccgctggcc gaactggcac ccgatctcga gttgccgggg cagggtcggg tggccgagct
      901 gctggcggcc gtcgataccg caggctgtgc gttgctggcc gaatgacgcc gcgccgcgga
      961 taatcgacgc catccgtttt cgggaagtcg ccgtgtacgt ggaatccgag aagcgcccgc
     1021 cgcgcaagcc agtcaccgtg ccgctgctgc atgcgatgaa ggccgagggc cggcgcatcg
     1081 ccatgctcac ggcctacgac ttcagcatgg cgagccagct cgaagccgcc ggcatcgacg
     1141 tggcgctggt cggcgattcg ctgggcatgg tgatccaggg gcatgccagc acgctgccgg
     1201 tcacgctgga gcacatggtc taccacaccg ccgccgttgc gcgcgggctg tccacgacgc
     1261 tgctgattgc cgacctgccg ttcatggccg accgcgacgt gccgcacgtg ctcgaggccg
     1321 gcacgcggct ggtcggcgag gccggtgcgg cgatggtcaa gctcgaaggc ggtgcgccgc
     1381 acatcctcga cgcgatcgcg gcgctcacgg cgcgcgcgat tccggtgtgc gcgcatctgg
     1441 ggctcacgcc gcagtcggtg cacaagttcg gcgggttccg catccagggc cgcgagccgt
     1501 ccgcggcgga gcacgtgctg gcgcaggcca aggcggtgca ggccgcgggc gccgacctgc
     1561 tggtgctcga aggggtgccg gccacgctcg gcgagcaggt gacccaggcg ctggcgatcc
     1621 cggtcatcgg catcggcgcc ggcccgcatt gcgacggcca ggtgctggtg tgctacgaca
     1681 tgctcggcat cacgcccggc aagcggccga agttcagcaa ggatttcctc gctggccgcg
     1741 gctcggtggc ggaggcgatt gccgcgtatg ccgaggcggt gcgcgacggc agtttccctg
     1801 cggcagaaca cagcttcaac tgagcggagg ccatcatgca aaccgtgcaa gacgcgcagg
     1861 cgctgcgcgc cgcgatccat ggctggcgtg aaaagggcca gaccgtcgcg ctggtgccga
     1921 ccatgggcaa cctgcacgcg gggcactact cgctggtgcg gctggcgcgc gagcgcgccg
     1981 agcgggtcgt cgccagcgtg ttcgtcaacc cgacccagtt cggcccgaac gaggattaca
     2041 cgcgctatcc gcgcacgctc gcgcaggacc aggccgggct ggccgagcat ggctgcgacc
     2101 tgctgttcgc gccggaggtg gcgacggtgt acccgttcgg tgccgagcac ggcgtcagcg
     2161 tgcacgtgcc gcaggtcacc gagatgctgg agggcgcgca tcgccccggt catttcgacg
     2221 gcgtggcgac ggtggtggcg aagctgttca acctcgtgca gcccgatctc gcggtgttcg
     2281 gccagaagga ttaccagcag ctcaaggtga tcgagcgcat ggtgcgcgac ctggcgctgc
     2341 cggtgaaggt tctcggcgcg ccgatccagc gtgccgacga cggcctggcg ctcagctcac
     2401 gcaaccagta cctgtccgct gccgagcgtg ccctcgcgcc gcagatccac cagacgctgc
     2461 ggctgatgca ggagctgatc ggcgaagggc atgcgtgcca tgccgtcgaa ctggtggcga
     2521 cagcgcgcct ggaacgcgcc gggttcatgc ccgactacac cgcgatccgc cgcgccgacg
     2581 accttggcgt gccggaggag catgcgcggc aggggctggt ggcgctgatc gccgcccggc
     2641 tcggcacgac ccggctgatc gacaacctgc agctcgcctg atgcggctcg gccgcatgca
     2701 tggcgacggg ctgcatggcg gaaggcgacg gagtgagcgc cgccccggcg gccccacgcg
     2761 aaaggcccgg cgggacgact cccgccccac ggggctgcgc gctattgcag gtcgggtttg
     2821 agtccgacgg tcgggccggc ttgccaggct gcccggtcat tgttgcggcg caacggcagc
     2881 ggttcgataa tgggcaactc gaatgaccgt ttttgcaggt atgccgtcat gctgctcaac
     2941 atgttcaagt ccaagatcca tcgcgcgacg gtgacccacg ccgagctgca gtacgagggc
     3001 tcgatcgcga tcgatggcga cctgctcgat gcgtgcggca tccgcgagta cgagcagatc
     3061 cacgcctggg acgtgagcaa cggcaagcgc ttcgtcacct acgcgctgcg cgccgaggaa
     3121 ggctcgggaa tcatttcggt caacggcagc gccgcgcacc gcgcgcagcc gggcgatctg
     3181 gtcatcatcg ccgcgttcgt gggtttgagc gaagccgagg cagcggtgt
//
LOCUS       DASSVL010000601         2229 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1072786,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000601 DASSVL010000000
VERSION     DASSVL010000601.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2229)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2229)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2229
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1072786"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..195)
                     /locus_tag="VFM52_10450"
     CDS             complement(<1..195)
                     /locus_tag="VFM52_10450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017460462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor protein MotB"
                     /protein_id="HET8765630.1"
                     /translation="MRRRHHEEHINHEAWAIPYGDLLTLLLALFVVMYAVSVVHEGKF
                     RVASNALVQAFHGTGRLDGMA"
     gene            complement(192..932)
                     /locus_tag="VFM52_10455"
     CDS             complement(192..932)
                     /locus_tag="VFM52_10455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007506948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor protein"
                     /protein_id="HET8765631.1"
                     /translation="MDVISVVGTILAFLVLIFGTILKGSTLDALWNPAAFVIVFLGTF
                     AALLVQNHGKVLKHALQMLKLIYQPPRHRPDDLISRIIGWSEISRRQGLLGLEPQIES
                     EDDPFVSKGLQLLVDGGEPDAIRGALEVDLETREAVDMAGAKVFETAGIYSPTLGIIG
                     AVMGLMAVMQNLTDPSQLGHGIAAAFVATIYGVALANLFMLPMAARLKSLVGRQTRMR
                     EILIEGLVSIAQGDNPRQIEARLQGYLS"
     gene            complement(936..>2229)
                     /locus_tag="VFM52_10460"
     CDS             complement(936..>2229)
                     /locus_tag="VFM52_10460"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007080061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="chemotaxis protein CheA"
                     /protein_id="HET8765632.1"
                     /translation="LHGKGGQPGLHDMSAGIAAAPPAAPAPAPKAAAHNAAPAETTVR
                     VDTGKLDVLVTHAGELVLARNRLLSLAARTRDEALAAAATELDRITDELQTSVMGMRM
                     QPVGRLFQRFPRIVRDLARQLGKEVELVLEGEDTDLDRSLVEALADPMVHLIRNAMDH
                     GIGLPDERERAGKPRKGSVTLAASQRGERIIITVTDDGRGMDPEILRRKAVEKGVIDA
                     TQAARLTEAECYELIFRPGFSTAAKVSDISGRGVGMDVVKTRITELGGTLGVHSRLGH
                     GSELELAVPLTLAVLRVLMVRVGDRLLALPLGNVEEVFELEAGQATLLDGRLVARHRG
                     RALPLVDLVDWCGVAAEAARHVAVLHIGHQRLGCLVHEVLGREDVIVKPLGHLFAGVP
                     GVAGATITGDGRLALVMDLASVADDPVFITAPALARAG"
BASE COUNT          311 a          790 c          799 g          329 t
ORIGIN      
        1 ggccatgccg tcgagccggc cggtgccgtg gaatgcctgc accagcgcgt tcgacgccac
       61 gcggaacttg ccctcgtgga cgaccgacac cgcgtacatc accacgaaca gcgcgagcag
      121 cagggtgagc aggtcgccgt acgggatcgc ccacgcctcg tggttgatgt gctcctcgtg
      181 gtggcgtcgc ctcacgacag gtaaccctgc aggcgcgcct cgatctggcg cgggttgtcg
      241 ccctgcgcga tcgacaccag gccctcgatc aggatctcgc gcatccgcgt ctggcggccg
      301 acgaggctct tgagccgcgc cgccatcggc agcatgaaca ggttcgccag cgccacgccg
      361 tagatggtgg cgacgaaggc cgcggcgatg ccgtggccga gctggctggg gtcggtgagg
      421 ttctgcatca ccgccatcag gcccatcacc gcgccgatga tgccgagggt cggcgagtag
      481 atgcccgccg tctcgaacac cttggcgccg gccatgtcga ccgcctcgcg ggtttccagg
      541 tccacttcga gcgcgccgcg gatcgcgtcc ggctcgccgc cgtcgaccag cagttgcagg
      601 cccttgctga cgaacgggtc gtcctcgctc tcgatctgcg gttccaaccc gagcaggccc
      661 tgccggcgcg agatttcgct ccagccgatg atgcggctga tgaggtcgtc cggccggtgc
      721 cgcggcggct ggtagatcag cttgagcatc tgcagcgcgt gcttcagcac cttgccgtgg
      781 ttctgcacca gcagcgcggc aaaggtgccg aggaacacga tcacgaacgc cgccgggttc
      841 cacagcgcgt ccagcgtgga gcccttgagg atggtgccga agatcagcac caggaaggcg
      901 aggatggtgc cgacgacgct gatgacgtcc atcgcctagc ccgccctggc cagcgccggt
      961 gcggtgatga acaccgggtc gtcggcgacg ctggcgagat ccatcaccag cgccagccgg
     1021 ccgtcgccgg tgatggtggc gccggcgacg ccgggcacgc cggcgaacag gtggccgagc
     1081 ggcttgacga tgacgtcctc gcggccgagc acctcgtgca ccaggcagcc caggcgctgg
     1141 tggccgatgt gcagcacggc gacgtggcgc gcggcttccg ccgccacgcc gcaccagtcg
     1201 acgaggtcga ccagcggcag cgcgcggccg cgatggcgcg cgacgaggcg gccgtcgagc
     1261 agggtggcct gcccggcttc cagctcgaac acctcctcga cgttgcccag cggcagcgcc
     1321 agcaggcggt cgccgacgcg caccatcagc acgcgcagca cggccagcgt cagcggcacg
     1381 gcgagttcca gctcgctgcc gtggccgagc cgcgaatgca cgcccagcgt gccgccgagc
     1441 tcggtgatgc gggtcttgac cacgtccatg ccgacgccgc ggccggagat gtcggacacc
     1501 ttcgccgcgg tggagaaccc cgggcggaag atcagctcgt agcactcggc ctcggtgagc
     1561 cgcgccgcct gggtggcgtc gatcacgccc ttttccaccg ccttgcggcg caggatctcg
     1621 gggtccatcc cgcggccgtc gtcggtgacc gtgatgatga tgcgctcgcc gcgctggctg
     1681 gccgccagcg tgaccgagcc cttgcgcggc ttgccggcgc gttcgcgctc gtcgggcagg
     1741 ccgatgccgt ggtccatcgc gttgcggatg aggtgcacca ttgggtcggc cagcgcctcg
     1801 accaggctgc ggtcgaggtc ggtgtcctcg ccttcgagca ccagctccac ctccttgccg
     1861 agctggcgcg cgaggtcgcg cacgatgcgc gggaagcgct ggaacaggcg cccgactggc
     1921 tgcatgcgca tgcccatcac cgaggtctgc agctcgtcgg tgatgcggtc gagttcggtg
     1981 gcggcggcgg ccagcgcctc gtcgcgggta cgcgcggcca ggctgagcaa acgattgcgc
     2041 gccagcacca gctcgccggc atgggtgacc agcacgtcga gcttgccggt atccacgcgc
     2101 accgtggttt ccgccggcgc ggcgttgtgc gcggcggcct tcggcgccgg ggcgggcgcc
     2161 gcgggcggcg cggcggcgat gcccgcgctc atgtcatgca agccgggctg accgcccttg
     2221 ccgtgcagc
//
LOCUS       DASSVL010000602         3967 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_847139, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000602 DASSVL010000000
VERSION     DASSVL010000602.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3967)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3967)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3967
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_847139"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..396
                     /locus_tag="VFM52_10465"
     CDS             <1..396
                     /locus_tag="VFM52_10465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008211365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HET8765633.1"
                     /translation="GGGEAVVALADPQQLQQVAWNLVQNALRYGRMPGESARVMVVAR
                     MGDHGVPILEVIDRGPGIPTKVAAQIFEPFYTTHEYGTGLGLYLARQMAEANQASLEY
                     VRVAGGGSCFRLVLTPAQMGLSAADAVPG"
     gene            489..1874
                     /locus_tag="VFM52_10470"
     CDS             489..1874
                     /locus_tag="VFM52_10470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019464623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HET8765634.1"
                     /translation="MSQQTVLVIDDERDIRELLTITLGRMDLQVDAVGTVADARRALA
                     GKPYDLCFTDMRLPDGSGQQIIEHIAANHPETPVAMITAYGNVDAAVTALKAGAFDFV
                     SKPVDIQMLRQLVRTALRLAEEKRSGKAAAKAGSADERLIGDSPAMQQVRTTIAKLAR
                     NQAPVYIAGESGVGKELVARLIHEQGPRAAGPFVPVNCGAIPSELMESEFFGHRKGSF
                     TGAVGDKEGLFQTAHGGTLFLDEVAELPLHMQVKLLRAIQEKAVRPIGAREEIPVDVR
                     ILSATHKDLAALVEHGQFRQDLFYRINVIELHVPPLRDRRGDVPLLADFILKGLAHKN
                     AGIAHRLQPDARAALEAYEFPGNVRELENILERATAMCDGEHITAADLMLPQRQVRPE
                     PPGATPAAPSAPAPSPTTAGGLDDYINNLERTAIVKALEESRYNKTAAAKKLGITFRA
                     LRYKLKKLGID"
     gene            complement(2082..3641)
                     /locus_tag="VFM52_10475"
     CDS             complement(2082..3641)
                     /locus_tag="VFM52_10475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007808367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HET8765635.1"
                     /translation="MQDSPDHPVVRVLVVEDNRNDAELALTELDDDELRYEARIVDAE
                     DAYLQALDEFKPDVVLSDLSLPGFSGQCALALLRQRDADLPFIYVSATIGEEAAIEAL
                     RNGATDYILKQNPARLASAVRRALTEAAERRASKRAEAELMRSQRFESLAMLAGGLSH
                     DLRNLLQPLLLAGDSLRQYQDDPQVARLGALVHDCGKRGLEMVRSMLSFARGARQSEQ
                     SVRLGALMDALALLLQGSVPRTVHMEMQVDAPDLQFEGNHTELQQCLLNLCLNAIQAM
                     PKGGTLRVETSRRQLDAGFFTARESPHPGRYLCLSVIDTGTGMSREVLGRLFEPFFTT
                     KAQGTGLGLVSCRRIVAAHGGVVRVDSTPGKGTRFDLYLPLQPTEAEAAAPADDDLLE
                     GAAEEVLVVAEAASQLSLLTNTLDAWGYHPHASQSGTAALQWVHAHGLPDLVLVDADM
                     NLFTGARTLGALVAQGYAGAVVMLARTDVPPNLDGLPPLPHLLVLDKPVTTRKLLRTL
                     RQALSGAGAPA"
     gene            complement(3662..>3967)
                     /locus_tag="VFM52_10480"
     CDS             complement(3662..>3967)
                     /locus_tag="VFM52_10480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003465455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HET8765636.1"
                     /translation="LHRRGQFAMREPGDPAVVLLDIKMPRMDGIEVLKRMRADEHLRR
                     VPVVILSSSREERDLARSWDLGVNAYVIKPVDVDQFFAAVRTLGQFWAVLNQAPEQP"
BASE COUNT          625 a         1431 c         1340 g          571 t
ORIGIN      
        1 ggcggcggcg aagccgtggt ggcgctggcc gacccgcagc agttgcagca ggtggcatgg
       61 aacctggtgc agaacgcgct gcgctacgga cgcatgccgg gcgagtcggc gcgcgtgatg
      121 gtggtggcgc ggatgggcga ccacggcgtg ccgatcctcg aggtgatcga ccgcggcccc
      181 ggcatcccaa ccaaggtcgc cgcgcagatc ttcgagccgt tctacaccac ccacgagtac
      241 ggcaccgggc ttgggctgta tcttgcgcgg cagatggccg aagccaacca ggcctcgctc
      301 gaatacgtgc gcgtggccgg cggcggcagc tgcttccggc tggtgctcac gccggcgcaa
      361 atggggctgt ccgccgccga cgccgtgccc ggctgacgcc gcctctcgca ggtgccggcc
      421 tggcgctttt gccccgtccc ggtgccgcgg gtatcctgaa ccgcaacgcc gccaccagcc
      481 cccatcccat gagtcaacag accgtcctgg tcatcgacga cgagcgcgac attcgcgagc
      541 tgctcacgat cacgctcggc cgcatggatc tgcaggtcga tgccgtcggc acggtagccg
      601 acgcgcgccg cgcgctggcc ggcaagccct acgacctgtg cttcaccgac atgcgcctgc
      661 ccgatggcag cggccagcag atcatcgagc acatcgccgc caaccatccg gaaacgccgg
      721 tggcgatgat caccgcctac ggcaacgtcg acgccgcggt gaccgcgctg aaggccggcg
      781 ccttcgactt cgtctccaag ccggtcgaca tccagatgct gcgccagctg gtgcgcaccg
      841 cgttgcggct ggccgaggag aagcgcagcg gtaaggcggc ggcgaaggcc ggcagcgcgg
      901 acgagcgcct gatcggcgac tcgccggcaa tgcagcaggt acgcacgacg atcgccaagc
      961 tcgcgcgcaa ccaggcgccg gtctacatcg ccggcgagtc cggtgtgggc aaggaactcg
     1021 tggcgcgcct gatccacgag cagggtccgc gcgcggccgg tccgttcgtg ccggtcaatt
     1081 gcggcgcgat cccctccgag ctgatggaaa gtgagttctt cggccaccgc aagggcagtt
     1141 tcaccggcgc cgtgggcgac aaggagggcc tgttccagac cgcgcacggc ggcacgctgt
     1201 tcctcgatga ggtggccgag ctgccgctgc acatgcaggt gaagctgttg cgtgcgatcc
     1261 aggaaaaggc ggtgcgcccg atcggcgcgc gcgaggagat cccggtcgac gtgcgcatcc
     1321 tctcggccac ccacaaggat ctcgccgcgc tggtcgagca cggccagttc cgccaggacc
     1381 tgttctaccg gatcaacgtg atcgagctgc acgtgccgcc gctgcgcgac cgccgtggtg
     1441 acgtgccgct gctggcggat ttcatcctga agggccttgc gcacaagaac gccggcatcg
     1501 cgcaccgcct gcagcccgat gcgcgcgccg cgctggaggc gtacgaattc cccggcaacg
     1561 tgcgcgagct ggaaaacatc ctcgaacgcg ccaccgcgat gtgcgacggc gagcacatca
     1621 ccgccgccga cctgatgctg ccgcagcgcc aggtgcgccc agagccgcct ggcgccacgc
     1681 cggcggcccc cagcgcacca gccccgtcgc ccactaccgc cggcggcctc gacgactaca
     1741 tcaacaacct ggaacgcacc gccatcgtga aggcgctcga ggaatcgcgc tacaacaaga
     1801 ccgccgcggc gaagaagctc ggcatcacct tccgcgcgtt gcgctacaag ctcaaaaagc
     1861 tcggcatcga ctgacgcgct ttgcgacccg cgcggtcgtc gggccgcatc ccgccccaca
     1921 agaccccgga acccggtggg tcgggatttg ttcccaccaa tgcccccagg cgaaccgtcg
     1981 tcgcgccgaa gcctgggcca cgagccccgg acccggcggg tcgaaactca tcccgaccgg
     2041 agcctcatgc gaacgttgcc gggcttcgcc tcgaccggcg ctcaggccgg cgcccccgcg
     2101 ccggacagag cctggcgcaa cgtgcgcagc agcttgcggg tggtgaccgg cttgtccagc
     2161 accagcaggt gcggcagcgg cggcaggccg tcgaggttcg gcggcacgtc ggtgcgcgcc
     2221 agcatcacca cggcgccggc gtagccctgc gccaccagtg cgccgagtgt gcgcgcgccg
     2281 gtgaacaggt tcatgtccgc gtccaccagc accaggtcgg gcaagccatg cgcatgcacc
     2341 cactgcagcg ccgcggtgcc actctggctc gcgtgcgggt ggtagcccca ggcgtccagc
     2401 gtgttggtca gcagcgacaa ctggctggcc gcctcggcga cgaccagcac ctcctcggcc
     2461 gcgccttcga gcaggtcgtc atcggccggc gcggcggcct ccgcctccgt cggctgcagc
     2521 ggcaggtaca ggtcgaagcg cgtgcccttg cccggcgtgc tgtcgacgcg cacgacgcca
     2581 ccgtgcgcgg ccacgatgcg ccggcacgac accaggccga gcccggtacc ttgcgccttg
     2641 gtggtgaaga acggctcgaa caggcggccc agcacctcgc ggctcatgcc ggtaccggtg
     2701 tcgatcaccg acaggcacag gtaacgcccc ggatgcggcg actcgcgtgc ggtgaaaaac
     2761 ccggcgtcga gctggcgccg gctggtctcg acgcgcagcg tgccgccctt gggcatcgcc
     2821 tggatcgcgt tgaggcaaag gttcagcaga cactgctgca attcggtgtg gttgccctcg
     2881 aattgcaggt cgggcgcatc aacctgcatc tccatgtgga ccgtgcgcgg cacgctaccc
     2941 tgcagcagca gcgccagcgc atccatcaat gcacccaagc gcacactctg ctcgctctgc
     3001 cgcgcaccgc gtgcgaacga cagcatcgaa cgcaccattt ccagcccgcg cttgccgcag
     3061 tcgtgcacca gcgcgcccag ccgcgccacc tgtggatcgt cctggtattg gcgcaggctg
     3121 tcgccggcca gcagcagcgg ctgcagcagg ttgcgcaggt cgtggctgag cccgccagcc
     3181 agcatcgcca ggctttcgaa gcgctgcgag cgcatcagct cggcctcggc gcgcttgctg
     3241 gcgcgccgct cggccgcctc ggtcagcgca cggcgcaccg cgctggcgag gcgcgccggg
     3301 ttctgcttga ggatgtagtc ggtggcaccg ttgcgcagcg cctcgatcgc ggcctcctcg
     3361 ccgatcgttg ccgagacgta gatgaacggc aggtcggcat cgcgctggcg cagcagcgcc
     3421 agtgcgcact gcccggagaa gcccggcagg ctgaggtcgg acagcaccac gtccggcttg
     3481 aattcgtcga gcgcctgcag gtaggcgtcc tcggcgtcga cgatgcgcgc ctcgtagcgc
     3541 agctcgtcgt cgtcgagttc ggtcagcgcc agctcggcgt cgttgcggtt gtcctccacc
     3601 accagcacgc ggacgactgg atgatcgggt gagtcctgca tgggcttgcc cccgtcgcgg
     3661 ttcatggttg ctcgggtgcc tggttcagca ccgcccagaa ctggccgagc gtgcgcacgg
     3721 cggcgaaaaa ctggtcgaca tcgaccggct tgatgacgta cgcgttgaca ccgaggtccc
     3781 agctgcgcgc gaggtcgcgc tcctcccgcg aggaggacag gatcaccacc ggcacccgcc
     3841 gcagatgctc gtcggcgcgc atgcgcttga gtacctcgat gccgtccatg cgcggcatct
     3901 tgatgtcgag cagcaccacc gccgggtcgc ccggctcgcg catggcgaac tggccacggc
     3961 gatgcag
//
LOCUS       DASSVL010000603         4032 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_508179, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000603 DASSVL010000000
VERSION     DASSVL010000603.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 4032)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4032)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4032
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_508179"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            224..2062
                     /locus_tag="VFM52_10485"
     CDS             224..2062
                     /locus_tag="VFM52_10485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015447185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HET8765637.1"
                     /translation="MPAPNESAPVVTGFGALALSPAVQQALVDVGYEAPSPIQAATIP
                     PLLEGRDVLGQAQTGTGKTAAFALPILSRIELRPGKPQALVLAPTRELAIQVAEAFQS
                     YAAHLPGLQILPIYGGQSYGPQLHALRRGVHVVVGTPGRVLDHLDKHTLDLSELKYLV
                     LDEADEMLRMGFIDDVEKVFEATPPTRQVALFSATMPAQIKKIAQKHLKDPVEVIIKS
                     ATATAANIHQRYWFVSGMHKLDAMTRILEAEPFDAMIVFARTKLATEELAEKLSARGF
                     AAAAINGDIAQAQRERVIQQLRDGKLDILVATDVAARGLDVERISHVLNYDIPYDTES
                     YVHRIGRTGRAGRSGEAILFVTPREKGMLRAIERATRQKIDEMKLPSVDAVNDVRITK
                     FKQRISDTLAKGELDLFQQLVEQYEAEHNVPASEIAAALARIAQGDRPLLLAPPPKRE
                     PAPREHPTHERTEHRERPERAPREFNPRPMRPHATEAGKTTYRIAVGHEHGVKPGNII
                     GAIANEAGLDSQYIGRLSIRGTYSLVDLPEGMPKEIFEHLKKVWVARQQLHIEPWDGK
                     ETEAPATDTTHDVHPARRPGGFRKPGGFKPGSHKPHAPGGKPTRSK"
     gene            2272..3054
                     /locus_tag="VFM52_10490"
     CDS             2272..3054
                     /locus_tag="VFM52_10490"
                     /EC_number="1.13.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012439351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051213 - dioxygenase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class III extradiol ring-cleavage dioxygenase"
                     /protein_id="HET8765638.1"
                     /translation="MSTLPTLFISHGSPMTALEPGQTGERLAELVAALPRPRAIVIAS
                     AHWLAPAPTVGSAARMATIHDFGGFPPALYALRYEPPGAPELALQAAGLLRAAGLDAH
                     VDPRRGVDHGMWVPLHLMYPQADIPVVPLSIQPTLGPAHQYALGQALAALRHDGVLVI
                     GSGSITHNLSDFRSGYGAQREAPYVRPFTDWIAARLAAHDVDALLDYRKRAPFAQHAH
                     PTDEHLLPLHFALGAAGADARATRLDAGIDLGFLAMDIYRFD"
     gene            complement(3141..>4032)
                     /locus_tag="VFM52_10495"
     CDS             complement(3141..>4032)
                     /locus_tag="VFM52_10495"
                     /inference="COORDINATES: protein motif:HMM:NF016143.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="neutral zinc metallopeptidase"
                     /protein_id="HET8765639.1"
                     /translation="VSSRGTRAEKTMDWQKGETSSNVEVNAGGGGPRFGGGGRMGLGG
                     LVILAIIGWVFFKNPLALLDQSGQYGGSAPTGAPTAQVDPQQKLFVAKVLGSTEKTWG
                     DLFAANGGTYVDPKLELFSGAVDTACGSASSAVGPFYCPGDQRIYLDLDFFRELDQRF
                     HASGDFARAYVIAHEVGHHVQNELGVFAKVKQLQAKGMPMEGAEGLSVRQELQADCLA
                     GVWANRSEQRLQWLQPGDVEAALNAASQIGDDTLQRESRGTVVPDSFTHGTSAQRVKW
                     FKTGMQSGDVGQCNTFAGPV"
BASE COUNT          641 a         1500 c         1330 g          561 t
ORIGIN      
        1 ctccggccgg cgccaggcca acccgccggc agcgcgcccg cacggccacg cgcagcaggc
       61 cagcggcgag cacgccgcgg cgaatcgcaa gcgccgcagc cgccatcgtc ccgccgcgaa
      121 agcctgaccg ctgcccgcac cgagccgcag gcttcacgcc tgcgctcgct acaatgccgc
      181 ctgattctgc acgcgtccgc gcgtgccacg ccgaggtttg cccatgcccg cccccaatga
      241 gtccgccccg gtcgtgaccg gcttcggcgc ccttgcgctg tcgccagccg tacagcaggc
      301 gctggtcgac gtgggctacg aagccccgtc gccgatccag gcggcgacca tcccgccgct
      361 gctggaaggc cgcgacgtgc tgggccaggc gcagaccggc accggcaaga ccgcggcgtt
      421 cgcgctgccg atcctgtcgc gcatcgagct ccggcccggc aagccgcagg cgctggtgct
      481 ggcgccgacc cgcgagctgg cgatccaggt cgccgaggcg ttccagagct atgccgcgca
      541 cctgccgggg ctgcagatcc tgccgatcta cggcggccag agctacggcc cgcagctgca
      601 cgcgctgcgc cgcggcgtgc acgtcgtggt cggcacgccg ggccgcgtgc tcgaccatct
      661 ggacaagcac acgctcgatc tctccgagct gaaatacctg gtgctcgacg aagccgacga
      721 gatgctgcgc atgggcttca tcgacgacgt ggagaaggtg ttcgaggcga cgccgccgac
      781 gcgccaggtg gcactgttct cggccaccat gccggcgcag atcaagaaga tcgcgcagaa
      841 gcacctgaag gatccggtcg aggtcatcat caagtcggcg accgccaccg ccgccaacat
      901 ccaccagcgc tactggttcg tcagcggcat gcacaagctg gatgcgatga cacgcatcct
      961 cgaggccgaa ccgttcgacg cgatgatcgt gttcgcgcgc accaagctcg ccaccgagga
     1021 gctggccgag aaactttccg cgcgcggctt tgccgccgcg gccatcaacg gcgacatcgc
     1081 ccaggcgcag cgcgagcggg tgatccagca gttgcgcgac ggcaagctcg acatcctcgt
     1141 cgccaccgac gtcgccgcgc gcgggctgga cgtggagcgc atcagccacg tgctgaacta
     1201 cgacatcccg tacgacaccg agagctacgt gcaccgcatc ggccgcaccg gccgcgcggg
     1261 gcgcagcggc gaggcgatcc tgttcgtcac cccgcgcgag aaaggcatgc tgcgcgcgat
     1321 cgagcgcgcc acccggcaga agatcgacga gatgaagctg cccagcgtcg acgcggtgaa
     1381 cgacgtgcgc atcaccaagt tcaagcagcg catcagcgat accctggcca agggcgagct
     1441 cgacctgttc cagcagctgg tcgagcaata cgaggccgag cacaacgtgc cggccagtga
     1501 gatcgccgcc gcgctggcgc gcatcgccca gggcgaccgc ccgctgctgc tggcgccgcc
     1561 gcccaagcgc gagccggcgc cgcgcgagca tcccacgcac gagcgcacgg agcaccgcga
     1621 gcgccccgaa cgcgcgccac gcgagttcaa cccgcgcccg atgcgcccgc acgcgaccga
     1681 ggccggcaag accacctacc gcatcgccgt cggccacgag cacggcgtga agcccggcaa
     1741 catcatcggc gccatcgcca acgaggccgg actggacagc cagtacatcg ggcgcctgtc
     1801 gatccgcggc acctacagcc tggtcgacct gcccgaaggc atgccgaagg aaatcttcga
     1861 acacctgaaa aaggtgtggg tcgcccgcca gcagctgcac atcgagccct gggacggcaa
     1921 ggaaaccgaa gctcccgcca ccgacaccac ccacgacgtg caccccgccc gccgccccgg
     1981 cggcttccgc aagcccggcg gcttcaagcc cggttcgcac aagccgcacg cacccggcgg
     2041 caagccgacg cggtcgaagt gatcgtcgtg tggcctgtgg gtcgggagtt atcccggcta
     2101 cggcctcggg tgtcgaaaga gcccgagtcg ggctgacgcc cgccccacga agtagccgcc
     2161 acagttcagc ggcagcgcaa gcgtttctgc tgcgcaacgc tgcgttcgtg gcggcggcgc
     2221 tgcaagtcgg ctgtgcgccg ctatcttgag cggatcgctt cgaggctcgc catgtccacc
     2281 ctgcccaccc tgttcatttc ccacggctcg ccgatgacgg cgctcgaacc gggccagacc
     2341 ggcgagcggc tggcggagct ggtggcggcg ttgccgcggc cgcgcgcgat cgtgatcgcc
     2401 agcgcgcatt ggctggcacc cgcgccgacg gtcggcagcg cggcgcggat ggcgacgatc
     2461 cacgatttcg gcggctttcc gccggcgctg tatgcgctgc gctacgaacc acccggtgcc
     2521 ccggagctgg cgttgcaggc ggccggcttg ctgcgcgcgg ccggcctcga cgcgcacgtc
     2581 gatccgcggc gcggcgtcga ccacggcatg tgggtgccgc tgcacctgat gtacccgcag
     2641 gccgacatcc cggtggtccc gctgtcgatc cagccgacgc tcggcccggc gcaccagtac
     2701 gcactgggcc aggcgctggc ggcgctgcgc cacgacggcg tgctggtgat cggctcgggc
     2761 agcatcaccc acaatctcag cgatttccgc agcggctacg gcgcgcagcg cgaagcgccc
     2821 tacgtgcggc cgttcaccga ctggatcgcg gcgcggctcg ccgcgcacga cgtcgacgcc
     2881 ctgctcgact accgcaagcg cgcgccgttt gcgcagcacg cgcacccgac cgacgagcac
     2941 ctgctgccgc tccacttcgc gctcggcgcg gccggcgcgg acgcgcgggc cacgcgcctc
     3001 gacgccggca tcgacctggg ctttcttgcg atggacatct accgcttcga ctgaggcgtc
     3061 gatgcactcg actggcggcg cggtcatcgc accgccggca acaccaggcc tgacgtcagc
     3121 gaaaaactcg gtctaccgcc tcacactggc cctgcaaagg tattgcactg gccgacgtcg
     3181 ccactttgca tgccggtctt gaaccacttc acgcgctgcg ccgaagtgcc gtgggtgaag
     3241 gaatccggca ccaccgtgcc gcgtgactcg cgctgcaggg tgtcgtcgcc gatctggctg
     3301 gccgcattca gggcggcttc gacgtcgccc ggctgcagcc attgcaggcg ctgctcgctg
     3361 cggttggccc acacgccggc caggcagtcc gcctgcagtt cctggcgcac cgacaggcct
     3421 tcggcgcctt ccatcggcat gcccttggcc tgcagctgtt tcaccttggc gaacacgccc
     3481 agttcgttct gcacgtggtg gccgacctcg tgcgcgatca cgtaggcgcg cgcgaaatcg
     3541 ccgctcgcat ggaagcgctg gtcgagttcg cggaagaaat ccaggtcgag atagatgcgc
     3601 tggtcgccgg ggcagtagaa cggtccgacc gccgaggagg ccgagccgca tgccgtgtcc
     3661 accgcaccgg aaaacagctc cagtttcggg tcgacgtagg tgccgccgtt ggcggcgaac
     3721 aggtcgcccc aggtcttttc ggtcgagccg agcacctttg ccacgaacag cttctgctgc
     3781 gggtcgacct gcgcggtggg tgccccggtc ggcgcgctgc cgccgtactg gccgctctgg
     3841 tcgagcagcg ccagcgggtt cttgaagaag acccagccga tgatcgcgag gatcaccagc
     3901 ccgccgaggc ccatgcgtcc gccaccgccg aagcgcgggc cgccgccacc ggcgttgacc
     3961 tcgacgttgc tgctggtttc gcccttctgc cagtccatcg ttttctccgc gcgggtgcca
     4021 cgcgacgata cc
//
LOCUS       DASSVL010000604         3580 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1356030,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000604 DASSVL010000000
VERSION     DASSVL010000604.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3580)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3580)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3580
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1356030"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..711)
                     /locus_tag="VFM52_10500"
     CDS             complement(<1..711)
                     /locus_tag="VFM52_10500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007513566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HET8765640.1"
                     /translation="MSSFHLDRTRLRHQFGRAAKTYEDHDALQRATEDLLLDRLDYYE
                     QTPEQVLDIGAGTGRGTALLKERYPKAEVIALDLAVPMLREAKKHSGWLKPLRRVCGE
                     ATALPFPDHSMDIVHSNLCFQWVDQLDAVFAEACRVLKPGGMLAFTSFGPDTLKELRA
                     AWASADAEGSHVGRFLDMHDVGVRCAQAAQVVEQLARRAVGHRHRGHLQHRLAQAGVD
                     HRVADVVHVEEAADVGMAV"
     gene            complement(708..1478)
                     /gene="bioH"
                     /locus_tag="VFM52_10505"
     CDS             complement(708..1478)
                     /gene="bioH"
                     /locus_tag="VFM52_10505"
                     /EC_number="3.1.1.85"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017460686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0009102 - biotin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pimeloyl-ACP methyl ester esterase BioH"
                     /protein_id="HET8765641.1"
                     /translation="MSLFVQKLGTGPVPVVMLHGWAMHGGLMAPLVEALMPRCTVYAV
                     DLPGHGNSRASQVPLAPGACAAAIAALTPPAIWLGWSLGGTIALAAALEQPQQVRALA
                     MLCATPKFTRSDDWPWGSDAMLVRQLATDLETDYHATIDRFLALEAMGSADPRAELRH
                     LRELAFARGEPDLRVLQEGIRILDTTDLRARLPALHQRSVWITGRRDRLIRPQAMAWS
                     AQQVHGSYAEIDHAGHAPFFSHADAVVRALEPLLEHHP"
     gene            complement(1475..2221)
                     /locus_tag="VFM52_10510"
     CDS             complement(1475..2221)
                     /locus_tag="VFM52_10510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014401676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase"
                     /protein_id="HET8765642.1"
                     /translation="MTVLNIAAYRFVSLDDLPTLRERVRATAERLALKGTVLLAPEGI
                     NLFLAGTQDAIAGFLAWLRADPRFADIEAKASWSAVVPFGRLRVRIKREIITMHAPAI
                     RPEAGRAPAVDAPTLKRWLDQGHDDAGREVVMLDTRNDYETAVGRFDAAVDYRIDRFT
                     AFPAAVAADRARYAGKTVVPYCTGGIRCEKAALHMQALGIEHVRQLEGGILKYLETTG
                     GAHWHGGCFVFDGRGAVDAGLQPVAAEPAA"
     gene            complement(2251..3441)
                     /gene="bioF"
                     /locus_tag="VFM52_10515"
     CDS             complement(2251..3441)
                     /gene="bioF"
                     /locus_tag="VFM52_10515"
                     /EC_number="2.3.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019465743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008710 - 8-amino-7-oxononanoate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009102 - biotin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="8-amino-7-oxononanoate synthase"
                     /protein_id="HET8765643.1"
                     /translation="MRPGLIERLAIQTAARETQQLRRRLHVIAHVDGPWVIRDGHRLL
                     GFCSNDYLGLAQHPRLIAALKAAADANGVGSTSAHLICGHRREHAELEEALAAWTGRE
                     RALLFSTGYMANLGIQQALLAPGDLCVQDKLNHACLLDGARRAGANLKRYPHADVAGA
                     ARRFATAPGAAALLATDGVFSMDGDVAPLAELAALARHEGATLLVDDAHGLGVLGTDG
                     AGSVAGAGFGTGEVPVLMATLGKALGASGAFVAGSAALIDGLTQFARTFVYTTAMPPA
                     LAAAGCTAVRLARDESWRREKLQALIARFRAGAAQLGLPLTDSPSAIQPLLLGDADAA
                     LAAARQLEARGLLVTAIRPPTVPHGQARLRVTLSAAHDEAQVDRLLTALAELPQGSAT
                     QRHL"
BASE COUNT          501 a         1222 c         1343 g          514 t
ORIGIN      
        1 gacggccatt cccacgtcag ccgcttcctc gacatgcacg acgtcggcga cgcgatgatc
       61 aacgccggcc tgcgcgagcc ggtgctgcag gtgaccacga tgacgatgac ctacagctcg
      121 ccgcgcaagc tgctcgacga cctgcgcggc ctgggcgcaa cgcacgccga cgtcgtgcat
      181 gtcgaggaag cggccgacgt gcgagccttc ggcgtccgcg ctggcccacg ccgcgcgcag
      241 ctccttcagc gtatccgggc cgaagctggt gaacgccagc atgccgccgg gcttcagcac
      301 gcggcacgcc tcggcgaaca ccgcgtcgag ctggtccacc cactggaagc acaggttgga
      361 gtgcacgatg tccatgctgt ggtcggggaa cggcagcgcc gtcgcctcgc cacacacgcg
      421 gcgcagcggc ttgagccagc cggagtgctt cttcgcctcg cgcagcatcg gcacggcgag
      481 gtcgagcgcg atcacctcag ccttcgggta gcgctccttg agcaaggcgg tgccgcgccc
      541 ggtgccggcg ccgatgtcga gcacctgctc gggcgtctgc tcgtagtagt cgaggcggtc
      601 gagcagcaga tcctcggtcg cgcgctgcag cgcgtcgtga tcctcgtagg tcttcgcggc
      661 gcgaccgaac tggtggcgca ggcgcgtgcg gtcgagatgg aagctgctca tggatggtgt
      721 tccagcaagg gttcgagggc gcgcaccacg gcatcggcgt ggctgaagaa cggcgcgtgg
      781 ccggcgtggt cgatctcggc atagctgccg tgcacctgct gcgcggacca ggccatggcc
      841 tgcggccgga tcaggcggtc gcggcggccg gtgatccaca cgctgcgctg gtgcagtgcc
      901 ggcaggcgtg cgcgcaggtc ggtggtgtcg aggatgcgga tgccttcctg cagcacgcgc
      961 aggtcgggct cgccgcgtgc gaacgccagc tcgcgcaggt ggcgcagttc ggcgcgcggg
     1021 tcggcgctgc ccatcgcctc gagggcgagg aagcggtcga tggtggcgtg gtagtcggtt
     1081 tccaggtcgg tggcgagctg gcgcaccagc atggcgtcgc tgccccacgg ccagtcgtcg
     1141 ctgcgggtga atttcggcgt ggcgcacagc atcgccagcg cgcgcacctg ctgcggttgc
     1201 tcgagcgcgg cggccagcgc gatggtgccg ccgagcgacc agccgagcca aatcgccggc
     1261 ggcgtgagcg cggcgatcgc cgcggcgcag gcgccgggcg caagcggcac ctggctggcg
     1321 cgcgagttgc cgtggccggg caggtcgacg gcgtacaccg tgcagcgcgg catcaaggcc
     1381 tcgaccagcg gcgccatgag gccgccgtgc attgcccagc cgtgcaacat cacgacgggc
     1441 accgggccgg tgccgagttt ctgcacgaac aggctcatgc ggcgggttcc gcggcgacgg
     1501 gctgcaggcc ggcatcgacg gcgccgcgcc cgtcgaacac gaagcagccg ccgtgccagt
     1561 gcgcgccgcc ggtggtttcg agatatttca aaataccgcc ttcgagctgg cgcacgtgct
     1621 cgatgccgag cgcctgcatg tgcagcgcgg ctttttcgca gcgaatgccg ccggtgcaat
     1681 acggcaccac ggtcttgccg gcgtagcgcg cgcggtcggc cgcgacggcg gcagggaagg
     1741 cggtgaaacg gtcgatgcgg taatccaccg cggcgtcgaa gcggcccacg gcggtctcgt
     1801 agtcgttgcg ggtgtcgagc atcaccacct cgcgcccggc atcgtcgtgg ccctggtcga
     1861 gccagcgctt gagcgtgggc gcatccaccg ccggtgcgcg cccggcctcg ggccggatcg
     1921 ccggcgcgtg catggtgatg atctcgcgct tgatccgcac gcgcagccgt ccgaacggca
     1981 ccactgccga ccatgacgcc ttcgcctcga tgtcggcgaa gcgcgggtcg gcgcgcaacc
     2041 aggcgagaaa cccggcgatc gcgtcctgcg tgccggcgag gaacaggttg atgccttccg
     2101 gcgcgagcag caccgtgccc ttgagggcga ggcgctccgc cgtggcccgc acgcgctcgc
     2161 gcagcgtcgg caggtcgtcg aggctgacga agcggtaggc ggcgatgttg aggacggtca
     2221 tgggcatggc gcgtgcaggc aagccgctga ttataggtgg cgttgcgtgg cggacccttg
     2281 aggcagctca gccagcgccg tgagcaggcg atccacctgc gcctcgtcgt gggcggcgga
     2341 gagcgtgacg cgcagccgcg cctggccgtg cggcaccgtg ggcgggcgga tcgcggtgac
     2401 cagcaggccg cgcgcttcga gttgccgggc cgccgccagc gcggcgtcgg cgtcgcccag
     2461 cagaagtggc tggatcgcac tgggcgagtc cgtcagtggc aggccgagct gggcggcgcc
     2521 ggcgcggaag cgtgcgatca gcgcctgcag cttttcgcgc cgccagctct cgtcgcgtgc
     2581 cagccgcact gccgtgcagc cggccgctgc caatgccggc ggcatcgccg tggtgtacac
     2641 gaaggtgcgc gcgaactggg tgagtccgtc gatcagcgcg gcggagccgg cgacgaaggc
     2701 gccgctcgcg ccgagcgcct tgcccagcgt cgccatcagc accggcacct cgccggtgcc
     2761 gaagcccgcg ccggccacgc tgcccgcgcc atcggtgccg agcacgccga ggccgtgcgc
     2821 gtcgtcgacc agcagcgtgg cgccttcgtg ccgtgcgagc gcggccagct ccgcgagcgg
     2881 cgccacgtcg ccatccatgc tgaacacgcc gtcggtcgcg agcagggcgg cggcacccgg
     2941 tgccgtcgcg aaccggcgcg cggcgccggc gacgtcggcg tgcgggtagc gcttgaggtt
     3001 cgccccagcc cgccgcgcgc cgtccagcag gcaggcgtgg ttgagcttgt cctgcacgca
     3061 caagtcgccc ggcgccagca gcgcctgctg gatgccgagg ttcgccatgt agccggtgga
     3121 aaacagcagc gcgcgttcgc gcccggtcca tgcggccaag gcctcttcca gctccgcgtg
     3181 ctcgcgccgg tggccgcaga tgaggtgtgc cgaggtgctg ccgacgccat tcgcgtcggc
     3241 tgccgccttg agcgcggcga tgagtcgtgg atgctgcgcc aggccgaggt agtcgttgct
     3301 gcagaagccg agcaaccgat ggccgtcgcg gatcacccac gggccatcca cgtgcgcgat
     3361 cacgtgcagg cgtcggcgca attgctgcgt ttcgcgtgcg gccgtctgga tggccaaacg
     3421 ttcgatcagg ccaggacgca tggcgagagc gccccctcac cccaaccctc tcccccaagc
     3481 gatgcttggg ggagagggag cacaagcggc gcagccgtcg agagagggtg tcggggtgag
     3541 gaggcttcag gcatgggctt gttcaaatgg caggggtttg
//
LOCUS       DASSVL010000605         2639 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1186203,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000605 DASSVL010000000
VERSION     DASSVL010000605.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2639)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2639)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2639
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1186203"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(242..799)
                     /locus_tag="VFM52_10520"
     CDS             complement(242..799)
                     /locus_tag="VFM52_10520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002811915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3228 family protein"
                     /protein_id="HET8765644.1"
                     /translation="MSIELTPFARARLFPRAARRNTIQDCTPTEFAARLNAEPPQRVL
                     DGYAPFCKLHVHRNWTSTRCMALPITDANRHLLRSGYEARTRAELPVLVRWFEGVDPP
                     VANYLVVILYNREQLAREHEPIAADWGIVGCLYTMEPEEIPMAPITMMRNALGVEEGG
                     SGVPLDREAYRRSAEFWEHHANWRP"
     gene            935..1759
                     /gene="metF"
                     /locus_tag="VFM52_10525"
     CDS             935..1759
                     /gene="metF"
                     /locus_tag="VFM52_10525"
                     /EC_number="1.5.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015448729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004489 - methylenetetrahydrofolate
                     reductase (NAD(P)H) activity [Evidence IEA];
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylenetetrahydrofolate reductase [NAD(P)H]"
                     /protein_id="HET8765645.1"
                     /translation="MAAISFEFFPPKTDEQRAQLDLTATQLLRWHPDYVSVTFGAGGS
                     TLSYTAETARHLKQTHGLTVAPHLSCMGGSRAEIAALLDQYRAAGFRRVVALRGDLPS
                     GMASPGDFRHASELVRFIREHAGDHFHIEVAAYPETHPQAENAHADLRHFKAKVDAGA
                     NGAITQYFFNPDAYFRFVDDVRKLGVNVPVVPGIMPIANYSQLQRFSDMCGAEIPRWI
                     GKRMQAHGDDAASIRALGAEVVAQLCRRLLDGGAPGLHFYTLNRMRATRAVLEQLD"
     gene            1799..2353
                     /locus_tag="VFM52_10530"
     CDS             1799..2353
                     /locus_tag="VFM52_10530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007809343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4124 domain-containing protein"
                     /protein_id="HET8765646.1"
                     /translation="MRLFVAILLLLVGTLACATGARAADTVHRCVDANGSPVFTDQPC
                     AALAATPVQAPANLASGMTSGALAPPARCADTPAALRQRVIAAFAAHDPNQLAGLMVW
                     RGYGSSAAVDDIKALAALVRGPLVGIHFGEDADPAAADTAATPAPAADAVRTLRVRTD
                     GASGRTARFDVGRQAGCLWLRFDG"
     gene            2426..>2639
                     /locus_tag="VFM52_10535"
     CDS             2426..>2639
                     /locus_tag="VFM52_10535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007509412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched chain amino acid aminotransferase"
                     /protein_id="HET8765647.1"
                     /translation="MAQQYPDWLWQNGEMKPWAQATTHVMSHALHYGSSVFEGIRSYA
                     TPDGAAIFRLTDHLKRFYNSAKIYDMA"
BASE COUNT          411 a          950 c          862 g          416 t
ORIGIN      
        1 ttcaacgtga gcggcgcggc gtcgaccggc gcgacgacga cccgaccgcc ctcgaccgtg
       61 atgctgacgc gctgatccgc ctgcagtcgc gccgcccgcg cgatcgccgt tggcagccgc
      121 acgccgaggc tgttgcccca atgcttgatg tccagcacga cgctcgtcat gtcaccaccc
      181 tcgaatgctt cgtatatacg cagtttaaac gacatccgtg aaacacggca atccggcgcc
      241 gctacggccg ccagttcgca tggtgctccc agaactcggc gctgcgccgg tacgcctcgc
      301 gatccagcgg cacgccggag ccgccctctt ccacgccgag cgcgttgcgc atcatggtga
      361 tcggcgccat cgggatttcc tcgggctcca tcgtgtacag gcagccgacg atgccccagt
      421 cggcggcgat cggttcgtgt tccctcgcca gttgctcgcg gttgtagagg atgacaacga
      481 ggtagttcgc caccggcggg tcgacgcctt cgaaccagcg cacgagcacc ggcagctcgg
      541 cccgggtgcg cgcctcgtag ccgctgcgca agaggtgccg gttggcgtcg gtgatcggca
      601 gcgccatgca gcgcgtggac gtccagttgc ggtgcacatg cagcttgcag aacggcgcgt
      661 agccatccag cacgcgctgc ggcggttcgg cgttgaggcg cgcggcaaac tccgtcgggg
      721 tgcaatcctg gatggtgttg cggcgcgccg cgcggggaaa caggcgggcg cgcgcaaacg
      781 gcgtgagttc gatggacatg gcatggccgc cgcggaaacc ggacgccagc gtagcccatg
      841 cgccggcacg cgcctgccgg ctcatgcatt tggacgtcta tctttgcatc gcgatggatg
      901 tatacaatac gccgtcacgc cccgaaggat gcccatggcc gcgatcagct tcgaattctt
      961 cccgcccaag accgacgagc agcgcgcgca gctcgacctg accgcgacgc agttgctgcg
     1021 ctggcacccc gactacgtat cggtcacctt cggcgccggc ggctcgacgc tcagctacac
     1081 ggcggaaacc gcgcgccatc tcaagcagac ccacggactc acggtggcgc cgcacctgtc
     1141 gtgcatgggc ggcagccgcg cggagatcgc cgccttgctc gaccagtacc gggccgccgg
     1201 cttccggcgc gtggtggcgc tgcgtggcga cctgccctcg ggcatggcct cgccaggcga
     1261 cttccgccac gcttccgaac tggtgcgctt catccgcgag cacgccggcg accatttcca
     1321 catcgaggtc gccgcttatc cggaaaccca tccgcaggcg gaaaacgcgc atgccgacct
     1381 gcgccatttc aaggccaagg tggacgctgg cgcgaacggc gcgatcaccc agtacttctt
     1441 caaccccgac gcgtatttcc gtttcgtcga cgacgtgcgc aagctcggcg tgaacgtgcc
     1501 ggtggtgccc ggcatcatgc cgatcgcgaa ctacagccag ctgcagcgct tctccgacat
     1561 gtgcggcgcc gagatcccgc gctggatcgg caagcgcatg caggcacacg gcgacgacgc
     1621 ggcgtcgatc cgcgccctcg gcgccgaagt ggtcgcgcaa ttgtgtcggc gcctgctcga
     1681 cggcggcgcg ccggggctgc acttctacac gctcaaccgc atgcgcgcga cgcgcgcggt
     1741 gctggaacag ctcgactgac gcacggacgc cgcgcggcaa cccgactacg ctggttgcat
     1801 gcgccttttc gtcgcaatcc ttctgctgct ggtcggcacg ctcgcttgcg ccacgggcgc
     1861 ccgcgccgcc gacaccgtgc atcgctgcgt cgacgcgaat ggctcgccgg tgttcaccga
     1921 ccagccgtgc gcagcgctgg ccgccacgcc ggtacaggcg cccgccaacc tggccagcgg
     1981 catgacatcc ggcgcgctgg cgccgccggc gcgttgcgcg gatacccccg ccgcgctgcg
     2041 ccagcgcgtg atcgccgcgt ttgccgcgca cgatccgaac cagctggccg ggctgatggt
     2101 gtggcgcggc tacggcagca gcgccgccgt ggacgacatc aaggcccttg ccgcactggt
     2161 gcgtgggccc ctggtcggca tccatttcgg cgaggacgcc gatccggccg cggccgacac
     2221 cgccgcaacg cctgcgccgg cggcggacgc cgtccgcacc ctgcgcgtgc gcaccgacgg
     2281 cgccagcgga cgcaccgcgc gtttcgacgt cggacgccag gctggctgcc tgtggctgcg
     2341 tttcgacggc tgattgcgtg cgggcgcagc atgcttgcgc gaaaaccgcg gattatcatg
     2401 cacggtcccc caacggagta tcgtcatggc gcagcagtac ccggattggc tctggcagaa
     2461 cggcgaaatg aagccgtggg cccaggccac cacccacgtg atgtcgcacg cgttgcatta
     2521 cggctcctcg gtgttcgagg gcatccgcag ctatgcgacg ccggacggcg cagcgatctt
     2581 ccgcctgacc gatcacctca agcgtttcta caactccgca aagatctacg acatggcct
//
LOCUS       DASSVL010000606         2200 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_550605, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000606 DASSVL010000000
VERSION     DASSVL010000606.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2200)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2200)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2200
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_550605"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1460)
                     /locus_tag="VFM52_10540"
     CDS             complement(<1..1460)
                     /locus_tag="VFM52_10540"
                     /inference="COORDINATES: protein motif:HMM:NF025079.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4158 domain-containing protein"
                     /protein_id="HET8765648.1"
                     /translation="MLTDAQLEGLLALPTREADLIRHWTLGAADLAVVERRRGHHNRL
                     GFALQLCAFRFPGRLLRPAEAIPEAALRFVAEQIGVGAEALVGYAKRPQTRREQLDGL
                     RATFGFRMFAPEHRRGIIAWLLPVTLATTNTSAVASALMDELRRRRIVAPGPSVLERL
                     VGAVMLQAERHVALQLTRGLTGEQATALDALLDRREGTPMSVLAWARQPPGAPGHRAL
                     ARLVERLDALRTLGLDPARADGVHPERLRKLAREGARLTAQHLRALSPLRRRATLVAT
                     VLDAATRLTDEGVGLFDRAVGRMFRRAEVREQDALLRDARAINDKVRLLAKLGGALIK
                     ARDAKADLETAVAEAVGWDRLARGVAEAERIARPDKADLPARAARAWPVLHRLGPLFL
                     GAFRLRAIPAAAATLRAVEALRAVYESGGRHWPHSLPTAFLRQAWREAVREAGDAARR
                     TWEAATLLALRDRLRAGDIWVEGSRQWRAIEDQLISP"
     gene            1569..2183
                     /locus_tag="VFM52_10545"
     CDS             1569..2183
                     /locus_tag="VFM52_10545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001549957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000150 - DNA strand exchange activity
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HET8765649.1"
                     /translation="MGQRAALYCRVSTPDQSCERQERDLAAFATRAGYEVVGVFRETG
                     SGAKLDRIERRKVLALAQRREIDAVLVTELSRWGRSTLDLLHTLEELETRRVSVIAMS
                     GLAFDLSTPHGRMLATVIAGIAEFERELIRERVRSGMAAAKARGKRLGRQPGQRPKSD
                     RLAPKVLALVAQGRSYRLIGRELGLSKNTVADIVRRSRTRHPAQ"
BASE COUNT          309 a          787 c          823 g          281 t
ORIGIN      
        1 ggcgagatca gctggtcctc gatggcgcgc cactgccggc tgccttcgac ccagatgtcg
       61 ccggcgcgca gcctgtcgcg caacgcgagc agcgtggcgg cctcccaggt ccggcgcgcg
      121 gcatcgcccg cctcccgcac cgcctcgcgc cacgcctggc gaaggaaggc cgtcggcagg
      181 ctgtgcggcc agtgccggcc accactctcg tagacggccc gcagcgcctc gaccgcgcgg
      241 agcgtcgcgg ccgccgcggg aatggcgcgc agccggaagg cgccgaggaa aagcggcccg
      301 agccggtgca gcaccggcca ggcgcgcgcg gcacgcgccg gcaggtcggc cttgtccggc
      361 cgcgcgatgc gctcggcttc ggcgacgccg cgtgccagcc tgtcccagcc gaccgcttca
      421 gccaccgccg tctccaggtc ggccttggcg tccctggcct tgatcagcgc cccgccaagc
      481 ttggcgagga ggcgcacctt gtcgttgatc gcgcgggcat cgcgcagcag ggcgtcctgc
      541 tcgcgcacct cggcgcggcg gaacatgcgt ccgacggcac ggtcgaacag gccgacgccc
      601 tcgtcggtca ggcgcgtggc ggcatcgaga acggtggcga ccagggtggc gcggcggcgg
      661 agtggcgaca acgcccgcag gtgctgcgcc gtgagacgcg cgccctcgcg cgccagcttt
      721 cggagccgct cgggatgcac gccatcggcg cgagccgggt cgagaccgag ggtacgcagg
      781 gcgtcgagcc gttcgaccag acgcgccagt gcgcggtgcc cgggcgcacc tggcggctgc
      841 cgtgcccagg ccagcacgct catgggcgtg ccctcccgcc ggtcgagcaa cgcgtcgagc
      901 gcggtcgcct gctccccggt gaggccgcgg gtgagctgga gggccacgtg acgttcggcc
      961 tgcagcatca cggcgccgac gaggcgctcg agcacgctcg ggccaggcgc cacgatccgc
     1021 cgtcggcgca gctcgtccat cagcgcggat gcgaccgccg acgtgttcgt cgtggcgagc
     1081 gtcaccggca gcagccacgc gatgatgccg cggcggtgct ccggcgcgaa catccggaag
     1141 ccgaacgtcg cgcgcaggcc gtcgagctgc tcgcgccggg tctggggccg cttggcgtag
     1201 cccaccaagg cttccgcgcc gacgccgatc tgctcggcca cgaagcgcag cgccgcctcc
     1261 gggatggcct cggccgggcg gagcagccgc ccggggaagc ggaaggcgca gagctgcagc
     1321 gcgaagccga gccggttgtg atgaccacgc cggcgctcga cgacagcaag atcggctgca
     1381 ccgagggtcc agtgccggat cagatcggcc tccctcgtcg gcagcgcgag cagcccctcg
     1441 agctgcgcgt cggtgagcac gcggcgtctc ggcatgcgga ttgtcccaat tgagctttag
     1501 actgttcggt acgaagctga cccgagcggc agcaatgggt tgcaggccgc cgatccggga
     1561 gggttcgatt gggacagagg gcggcgctct actgccgggt ctcgaccccg gaccagtcct
     1621 gcgagcgcca ggagcgtgac ctcgctgcct tcgccacgcg cgccggctac gaggtggtcg
     1681 gggtgttccg ggagaccggg tcgggcgcca agctcgaccg tatcgagcgg cggaaggtgc
     1741 tggcgctagc gcagcggcgc gagatcgatg cggtgctggt gaccgagctg tcgcgctggg
     1801 gccgtagcac gctggacctg ctgcacacgc ttgaggagct ggagacccgg cgcgtgtcgg
     1861 tgatcgccat gagcggcctg gcgttcgacc tctcgacgcc gcacgggcgc atgctggcga
     1921 ccgtcatcgc gggcatcgcc gagttcgagc gcgaactgat ccgcgagcgc gttcgctccg
     1981 gcatggcggc ggcgaaggcg cgcggcaagc gcctcggtcg ccagcccggc cagcggccga
     2041 agtcagatcg gctggcaccg aaggtgctgg cactcgtcgc acaaggccgc agctaccggc
     2101 tgatcggccg agaactcggg ctgagcaaga acaccgtcgc cgacatcgtc aggcgaagcc
     2161 ggacccgtca tcccgcccag tgacgcatcg gtgttccggc
//
LOCUS       DASSVL010000607         4387 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_225738, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000607 DASSVL010000000
VERSION     DASSVL010000607.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 4387)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4387)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4387
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_225738"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            367..1842
                     /gene="trpE"
                     /locus_tag="VFM52_10550"
     CDS             367..1842
                     /gene="trpE"
                     /locus_tag="VFM52_10550"
                     /EC_number="4.1.3.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008575582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004049 - anthranilate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate synthase component I"
                     /protein_id="HET8765650.1"
                     /translation="MISHREFDALAAKGHTRIPLVREVFSDLDTPLSVYLKLADGPYT
                     FLFESVASGETWGRYSIIGLPARRVYRLRAHELEVEECGEVVERRHLDDPLGGIEQLR
                     KQYDVPHLPGLPAFSGGLVGYFGFETIGYIEPRLARWDRRDELGTPDVLLMLAEEVAV
                     FDNLKGRLYLIVHADPAEPQAYAKAQRRLDALVYRLRASGAAYPQLVHAEVLDESDFK
                     SSFTKPEFEAMVERCKEHIRAGDVFQVVPSQRLSVRFGARPVDVYRALRALNPSPYMY
                     FVDLGATQIVGSSPEILARLKDGKVLVRPIAGTRKRGASEAEDKALEAELIADPKERA
                     EHLMLIDLGRNDVGRISRTGTVEVTDSFVVEHYSHVMHLVSQVQGEVRAGLSYMDVLK
                     AAFPAGTLSGAPKIRALEIIQELEPFKRNIYGGAIGWIGWWGDADTAIAIRTAVIQDG
                     RLHVQAGAGIVYDSDPAAEWEETMNKGRALFRAVAQAAQGL"
     gene            2143..2742
                     /locus_tag="VFM52_10555"
     CDS             2143..2742
                     /locus_tag="VFM52_10555"
                     /EC_number="4.1.3.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017463034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004049 - anthranilate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0046820 - 4-amino-4-deoxychorismate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate/anthranilate synthase
                     component II"
                     /protein_id="HET8765651.1"
                     /translation="MLLMIDNYDSFTFNLVQYLGELGQEVKVVRNDAIDVAGIRALRP
                     AHIMISPGPGTPDDAGVTLAVLRELAGAVPIFGVCLGHQAIGQAFGGKVVRAKRIMHG
                     KTSPMHHRGQGVFAGLPNPFEATRYHSLVVDQASLPDCLEVTAWTENADGSLDEIMGL
                     RHKTLPVEGVQFHPESILTRQGYAILENFLGLPHRRLAA"
     gene            2739..3803
                     /gene="trpD"
                     /locus_tag="VFM52_10560"
     CDS             2739..3803
                     /gene="trpD"
                     /locus_tag="VFM52_10560"
                     /EC_number="2.4.2.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017463033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004048 - anthranilate
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate phosphoribosyltransferase"
                     /protein_id="HET8765652.1"
                     /translation="MSAREITITVQEALQRTIEHREIFHDEMIALMRQIMAGEVSPLM
                     TAAIITGLRVKKETVGEITGAARVMRELSHKVTVPGDTSHLLDIVGTGGDGASSFNIS
                     TCSMFVAAACGARIAKHGGRSVSSKSGSADVLEALGARIDLKPAQVAQCLAETGIGFM
                     FAPNHHPAMKVVAPVRKEMGVRTIFNILGPLTNPAGAPNILMGVFHPDLVGIQVRVLQ
                     QLGAQRALVVWGRDGMDEISLGAATLVGELRDGVVREYEIEPEDFGLAMASSRNLRVA
                     DVAESKAMLLGVLEGQAGVAHDIVCLNAGAALYAAGCADSIDAGIAQAGAAIASGAAH
                     AKMHAFVAATARVAASAQPA"
     gene            3862..>4387
                     /locus_tag="VFM52_10565"
     CDS             3862..>4387
                     /locus_tag="VFM52_10565"
                     /EC_number="4.1.1.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007509618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004425 - indole-3-glycerol-phosphate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="indole-3-glycerol phosphate synthase TrpC"
                     /protein_id="HET8765653.1"
                     /translation="MTDILNRILARKAEEVAERRSRLPLAELAARIPDLPDTRGFAAA
                     IEAKINAGKPAVIAEVKKASPSKGVIRPNFDPAAIAKSYEKGGAACLSVLTDSDFFQG
                     SEAFLQQAREACSLPVLRKDFIIDSYQVHEARAIGADCVLLIVAALDDDELLQLSMQA
                     AELDLDVLCEVHDEE"
BASE COUNT          697 a         1456 c         1553 g          681 t
ORIGIN      
        1 tgccgcggcc gaggctgtag gacgagggct tcctttttcg ccgatggctc ggcaaggatt
       61 ccctctcccc caacggcttt tcgttggggg agaggggcag ggtgaggggg cgcttgtggg
      121 ttgcggcgac gcccctcacc ccagccctct cccccaagca ggcgtggggg tgagggagtt
      181 gcaagctcgg gtgcgcgcat cctcgccggt ggtgcaacgg cacttgccga tgcgcaacga
      241 cgctctccct ctccctgccg gtggcgcggt tctccagagc cggcacaaga cgcaagtttg
      301 gacgtccata cggaaaaccg cgcggccctg ctatcgttcg caactcaacc ccgcatggat
      361 cgttccgtga tctcccaccg cgaattcgac gcccttgccg ccaaggggca cacccgcatc
      421 ccgctcgtgc gcgaggtgtt ttccgacctc gacacgccgc tgtcggtgta cctgaagctg
      481 gccgacggcc cgtacacctt cctgttcgag tcggtggcca gcggcgagac ctgggggcgc
      541 tattcgatca tcggcctgcc ggcgcggcgg gtgtaccgcc tgcgtgcgca tgagctggag
      601 gtggaggagt gcggcgaggt ggtggagcgt cgccatctcg acgacccgct gggcgggatc
      661 gagcagctgc gcaagcagta cgacgtgccg cacctgccgg ggctgccggc gttcagcggc
      721 gggttggtgg gctatttcgg cttcgagacc atcggctaca tcgagccgcg gctggcgcgc
      781 tgggatcgcc gggacgagct gggcacgccg gacgtgctgc tgatgctggc cgaggaagtc
      841 gccgtgttcg acaacctcaa gggccgcctg tacctcatcg tgcacgccga tccggccgag
      901 ccgcaggcgt atgcgaaggc gcagcggcgg ctggatgcgc tggtgtaccg gctgcgcgcg
      961 agtggcgcgg cctatccgca gctggtgcat gccgaggtgc tcgacgaaag cgatttcaag
     1021 tcgtcgttca ccaagccgga attcgaggcg atggtggagc gctgcaagga gcacatccgc
     1081 gccggcgacg tgttccaggt cgtgccctcg cagcgcctgt cggtgcgttt cggcgcgcgc
     1141 ccggtcgacg tgtaccgcgc gctgcgcgcg ctgaacccct cgccgtacat gtatttcgtg
     1201 gatctcggcg ccacccagat cgtcggctcc tcgccggaaa tcctggcccg cctcaaggac
     1261 ggcaaggtgc tggtgcggcc gatcgccggc acccgcaagc gcggcgcgag cgaggccgag
     1321 gacaaggcgc tcgaagccga gttgatcgcc gacccgaagg agcgcgccga gcacctgatg
     1381 ctgatcgacc tgggccgcaa cgacgtcggt cgcatcagcc gcaccggcac cgtcgaggtg
     1441 accgattcct ttgtggtcga gcactactcg cacgtcatgc acctggtgtc gcaggtgcag
     1501 ggcgaagtgc gcgcggggct ttcctacatg gacgtgctca aggccgcctt cccggccggc
     1561 acgctcagcg gcgcgccgaa gatccgcgcg ctggaaatca tccaggaact ggagccgttc
     1621 aagcgcaaca tctacggcgg cgcgatcggc tggatcggtt ggtggggcga tgccgacacc
     1681 gcgatcgcga tccgcaccgc ggtgatccag gacggccgcc tgcacgtgca ggccggcgcc
     1741 ggcatcgtct acgactccga ccccgccgcc gagtgggagg agacgatgaa caagggtcgc
     1801 gcgctgttcc gcgcggtggc gcaagcggcg caggggctct aggcgcgcct tgtacccgcg
     1861 cccaatccgc gatgctgtcg tggatgccgg cgaggaacgg gtcggcgaaa ccggccagca
     1921 aaaaggcgat ggcggcggcc gtcggcgtct tgcgctggtt gcgccgataa ccaacgacca
     1981 gcagcaccgc gccgacgagc agcaggagcc atgtcaggta tgccaccgca ttcatcgtga
     2041 cgggccatgg cgccatcgcg tgcgccggaa tggtttccgc gtttggccgg ctataatgca
     2101 agacccacgg tgcgcgcggc gcaccaagcc gatgagcccg ccatgctgct gatgatcgac
     2161 aactacgaca gctttacctt caacctcgtg cagtacctgg gcgagttggg gcaggaggtg
     2221 aaggtggtgc gcaacgacgc gattgacgtg gccggcatcc gcgcgctcag gcccgcgcac
     2281 atcatgattt cgccggggcc gggtacgccg gacgatgcgg gggtgacgct ggcggtgctg
     2341 cgcgagctgg cgggcgcggt gccgatcttc ggcgtgtgcc tcggccacca ggcgatcggc
     2401 caggcgttcg gcggcaaggt ggtgcgcgcg aagcggatca tgcacggcaa gacctcgccg
     2461 atgcaccatc gcggccaggg cgtgttcgcc ggcctgccca atccgttcga ggccacgcgc
     2521 taccactcgc tggtggtcga ccaggcctcg ctgccggatt gcctcgaagt caccgcgtgg
     2581 accgagaacg ccgacggttc gctggacgag atcatgggtc tcaggcacaa gacgctgccg
     2641 gtggagggcg tgcagttcca tcccgaatcg atcctgaccc ggcagggcta cgcgatcctc
     2701 gagaacttcc tcggcctgcc acaccggagg cttgccgcat gagcgcccgc gagatcacca
     2761 tcacggtaca ggaggcgctg cagcgcacga tcgagcatcg cgagatcttc cacgacgaaa
     2821 tgatcgcgct gatgcgccag atcatggctg gcgaggtgag cccgctgatg acggcggcga
     2881 tcatcaccgg cctgcgggtg aagaaggaga ccgtcggcga gatcaccggc gcggcgcggg
     2941 tgatgcgcga gttgtcgcac aaggtcaccg tgcccggcga caccagccac ctgctcgaca
     3001 tcgtcggcac cggcggcgac ggcgcatcga gcttcaacat ctccacctgc tcgatgttcg
     3061 tggccgccgc gtgcggcgcg cgcatcgcca agcacggcgg gcgcagcgtg tcgtcgaagt
     3121 ccggcagcgc ggacgtgctc gaggcgctcg gtgcgcgcat cgacctgaag cctgcgcagg
     3181 ttgcgcaatg cctggccgag accggcatcg gcttcatgtt tgcgccaaac catcatccgg
     3241 cgatgaaggt ggtggcgccg gtgcgcaagg agatgggcgt gcgcaccatc ttcaacatcc
     3301 tcggcccgct caccaacccg gccggcgcgc caaacatcct gatgggcgtg ttccatcccg
     3361 acctcgtcgg catccaggtg cgcgtgctgc agcagctcgg cgcgcagcgc gcgctggtgg
     3421 tgtgggggcg tgacggcatg gatgagatct cgctcggcgc ggcgacgctg gtcggcgagc
     3481 tgcgcgacgg cgtggtgcgc gagtacgaga tcgagccgga ggatttcggc ctggcgatgg
     3541 cgtccagccg caacctgcgc gtggccgacg tggcggagtc gaaggcgatg ctgctcggcg
     3601 tgctcgaagg ccaggctggc gtggcgcacg acatcgtgtg cctgaacgcg ggcgccgcgc
     3661 tgtatgcggc gggctgcgcc gactcgatcg acgccggcat cgcgcaggct ggcgcggcga
     3721 ttgccagcgg cgcggcgcat gcgaaaatgc acgccttcgt ggccgccacc gcgcgcgtcg
     3781 ccgcgtcggc gcagccggct tgacggcgcg acgacgcatg cgccgccacg atgcctccgc
     3841 ctccgccttc cccggatcgc catgaccgac atcctcaacc gcatcctcgc ccgcaaggcg
     3901 gaagaagtag ccgagcgccg ctcgcgcctg ccgctggccg aactggccgc ccgcatcccc
     3961 gacttgcccg atacgcgcgg ttttgccgcg gccatcgagg ccaagatcaa cgccggcaag
     4021 ccggcggtga tcgccgaggt gaagaaggcc agccccagca agggcgtgat ccggcccaac
     4081 ttcgacccgg cagccattgc gaaaagctac gagaagggtg gcgcggcctg cctgtcggtg
     4141 ctgaccgaca gcgatttctt ccagggcagc gaggcgttcc tgcagcaggc gcgcgaggcg
     4201 tgctcgctgc cggtgctgcg caaggatttc atcatcgaca gctaccaggt gcacgaggcg
     4261 cgggcgatcg gcgccgactg cgtgctgctg atcgtggccg cgctggacga cgacgagctg
     4321 ctgcagctgt cgatgcaggc cgccgagctg gatctcgacg tcctgtgcga agtgcacgac
     4381 gaggaag
//
LOCUS       DASSVL010000608         2105 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1172155,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000608 DASSVL010000000
VERSION     DASSVL010000608.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2105)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2105)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2105
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1172155"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..192
                     /locus_tag="VFM52_10570"
     CDS             <1..192
                     /locus_tag="VFM52_10570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007808301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isochorismatase family protein"
                     /protein_id="HET8765654.1"
                     /translation="VDEVVVCGLARDVCVLWTAQDAVALGFKASLAWDLSRPVTPAHD
                     AATRAALVEHGIAEITLAA"
     gene            complement(197..385)
                     /locus_tag="VFM52_10575"
     CDS             complement(197..385)
                     /locus_tag="VFM52_10575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007511652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CPXCG motif-containing cysteine-rich protein"
                     /protein_id="HET8765655.1"
                     /translation="MPVPYDIHCPYCGEDIELLLDDSLPEQCYIEDCSVCCRPIVVAV
                     NFDDAGVPHVHAAREDEA"
     gene            complement(458..892)
                     /locus_tag="VFM52_10580"
     CDS             complement(458..892)
                     /locus_tag="VFM52_10580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019465236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PIN domain-containing protein"
                     /protein_id="HET8765656.1"
                     /translation="MAARPRVVLDTNVCLDLFVFGDPRAAALGAALRAGAVLAVTDVA
                     CRDEWLRVLGYPQIALDAARRAAAVADYDAWLAPWSETVAGVPAPLPRCADADDQKFL
                     ELAQRTHAGCLLSRDHELLKLAPRTRRDHGFDVVAPWDWIAA"
     gene            complement(892..1611)
                     /locus_tag="VFM52_10585"
     CDS             complement(892..1611)
                     /locus_tag="VFM52_10585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007511659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HET8765657.1"
                     /translation="MLKMVGFDGDDTLWRSEDYYRAANAEFSAIVGAYVDLDDAEVQA
                     RMLATERRNLALFGYGAKGMTLSMVETAIALSEQRIGAPDIERIMALGRHVLQHPVVL
                     LPGIRAAVATVAARYPVVLITKGDLFHQERKVAESGLADQFRRIEIVSEKNPATYRRL
                     LDEFGVAAHEFAMVGNSLRSDIEPVVRLGGWGVHMPYHVTWAHELDTQLDPRDAPHVR
                     EVAQAGEIPAAVAQLDTLAYA"
     gene            1766..>2105
                     /locus_tag="VFM52_10590"
     CDS             1766..>2105
                     /locus_tag="VFM52_10590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017357052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="META domain-containing protein"
                     /protein_id="HET8765658.1"
                     /translation="MRVHLLLLPLALAACTTVPATEPPSRLDTATLAAYHWRLDTATD
                     RAGQRIDALFARPDRPLELDFAADRVSVRNSCNAMGGSYRLAGGTLLTGPFVHTMMAC
                     ADPRLSRLDQS"
BASE COUNT          317 a          769 c          713 g          306 t
ORIGIN      
        1 gtggacgagg tggtggtgtg cgggctggca cgcgacgtgt gcgtgctgtg gacggcgcag
       61 gatgccgtcg cgctcggttt caaggccagc ctcgcctggg acctcagccg gccggtgacg
      121 ccggcgcacg acgccgcgac gcgcgcggcg ctggtcgagc acggcatcgc ggagatcacg
      181 ctggcggctt gatccctcac gcctcgtcct cgcgtgccgc atgcacgtgc ggcacgccgg
      241 cgtcgtcgaa gttcaccgcg accacgatcg gccggcaaca cacgctgcaa tcctcgatgt
      301 agcactgctc cggcagggaa tcgtcgagca gcagctcaat atcttccccg cagtacgggc
      361 aatggatgtc atagggcacg ggcatggcgc gctccgttcg ccgcaacgcc cgcagcctcg
      421 cacgcccggt gtcgacgcca cgcatagggc acggcgctca ggcggcgatc cagtcccacg
      481 gtgcgacgac atcgaagccg tggtcgcgcc gggtgcgtgg cgcgagtttc agcagttcgt
      541 gatcgcggct cagcaggcag cccgcgtgcg tgcgctgcgc cagttcgaga aatttctggt
      601 cgtccgcatc ggcgcagcgc ggcagtggcg ccggcacgcc agccacggtt tcggaccatg
      661 gcgccagcca cgcgtcgtag tcggcgaccg ccgccgcgcg gcgcgcggca tccagcgcga
      721 tctgcggata gccgagcaca cgcagccatt cgtcgcggca cgccacgtcg gtcaccgcca
      781 gcacggcgcc ggcgcgcagg gcggcgccga gcgcggccgc ccgcgggtcg ccgaacacga
      841 acaggtcgag gcagacgttg gtgtcgagca ccacgcgcgg ccgcgccgcc atcaggcgta
      901 cgccagcgtg tcgagctgcg ccacggcagc cgggatctcg cccgcctgcg ccacctcgcg
      961 cacatgcggc gcgtcgcgcg gatcgagctg ggtgtccagc tcgtgcgccc aggtcacgtg
     1021 atagggcatg tgcacgcccc agccgccgag gcgcaccacc ggctcgatgt ccgagcgcag
     1081 cgaattgccg accatcgcga actcgtgcgc ggcgacgccg aactcgtcga gcaggcggcg
     1141 gtacgtggcc gggtttttct cggagacgat ctcgatccgg cggaactggt cggccagtcc
     1201 ggattcggcg accttgcgct cctgatggaa caggtcgccc ttagtgatca gcacgaccgg
     1261 gtagcgcgcg gccacggtcg ccaccgcggc gcggatgccg ggcagcagca ccaccggatg
     1321 ctgcagcacg tgcctgccga gcgccatgat gcgctcgatg tccggcgcac cgatgcgctg
     1381 ctcgctgagc gcgatggcgg tttccaccat ggacagcgtc atgcctttcg cgccgtagcc
     1441 gaacaacgcg agattgcgcc gctcggtcgc cagcatgcgg gcctgtactt cggcgtcgtc
     1501 aaggtcgacg taggcgccca cgatcgcgct gaactccgca ttcgcggcgc ggtagtagtc
     1561 ctcgctgcgc cacaacgtgt cgtcgccgtc gaaacccacc atcttgagca tgcacgccgc
     1621 tccgcatcgc atcccgaaac cggcattgtc gacgatgtgt gcggcaactg cagcgcatga
     1681 acggcgagcc gccgcgcgcc agcaccggtg catccggacc gcggacatgc cctaagctcg
     1741 tggcgtcccc atcgccgaga ccgccatgcg tgtccacctg ctgttgctgc cactggccct
     1801 tgcggcctgc accacggtgc cggcgaccga accgccatcg cgcctcgaca ccgccacgct
     1861 ggccgcctac cactggcggc tcgataccgc gaccgaccgg gccgggcagc gcatcgatgc
     1921 gctgttcgcc cgcccggatc gcccgctcga actcgacttc gccgccgacc gggtgagcgt
     1981 gcgcaacagc tgcaacgcga tgggcggcag ctatcgcctc gccggcggga cgctgctcac
     2041 cgggccattc gtccatacca tgatggcctg cgccgatccg cggctgagcc gtctcgacca
     2101 gtcga
//
LOCUS       DASSVL010000609         2699 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_141154, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000609 DASSVL010000000
VERSION     DASSVL010000609.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2699)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2699)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2699
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_141154"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            208..1026
                     /locus_tag="VFM52_10595"
     CDS             208..1026
                     /locus_tag="VFM52_10595"
                     /inference="COORDINATES: protein motif:HMM:NF006007.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase"
                     /protein_id="HET8765659.1"
                     /translation="MPKTTPRTRKRAPQAPSRVVLAERLEDGVAVVRLHRPKATNALS
                     LALQAQLAAAFVELAADEAVRCIVLTGGEQVFAAGGDIKGLEQAGPIEIMQRHTERVW
                     APIEQCPKPVIAAVCGYAYGGGAELAMHCDIIIAGEGARFAQPEIRIGIMPGIGGTQR
                     LVRAVGKFNAMRMLLTGKPVGAAEARLMGLVSAVVPDAQVLPEALAMARTIAAMPPLA
                     AQQIKEVVLAGMDAPLGAALALERKANQLLFATVDQKEGMQAFIEKRKPRFRGR"
     gene            1304..>2699
                     /locus_tag="VFM52_10600"
     CDS             1304..>2699
                     /locus_tag="VFM52_10600"
                     /inference="COORDINATES: protein motif:HMM:NF019335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor plug domain-containing
                     protein"
                     /protein_id="HET8765660.1"
                     /translation="MKRRALSWQISLLLAATATGLMATATPSPAQEAPDTQNPQDAPA
                     TPPPKAKAKTLKAMVVTAERREQNIQAVPLTVSAMDQAELNRRGITSVADLNAVAPSL
                     VVVPETAGYTTGAQFSLRGEFVGNPAMYWDSTTGVYVNGVYFGKSKVDVFSLPDLERI
                     EVLNGPQGTLYGRNTIGGAVNIVTQKPSGVFTGTAQAGYGRYGDKTVMARTDLPAWGK
                     LNISVGGRYEKRDGWVKTTPGSSVSSLGQLDNKDAYLDMLLNATDNLSIEYRYDYTSA
                     HNTPNFSQVVHSDIQRMFRIPGIIVNQDRQTTASVDAPVFEDLRTDANALHVDWKLGV
                     GTLKYIGAHSETHYNNGLDLDGSPIPFAQSEEFNRYRETSHELQYVGSAGNWNWVTGL
                     YYFKDAGFNNNPQRYFFGAATFQPNEYWYGSRSRAAYGQVDYKIGERWTITAGLRRTL
                     DEKRVSRVMQSGAYV"
BASE COUNT          503 a          970 c          853 g          373 t
ORIGIN      
        1 ccgcggcgag aaaaccttcg gcaataccgc ggccaatgcc cttgctgccg ccggtgacca
       61 gcacgacgcg cccgtcgaat tgctcgctgt gtgccatcaa tgcgcgcccc ggtaaatgtc
      121 cacgcggcca gactaggcag cgtcacgcgg gcgttccacg tccaatcgga cgatgctgca
      181 cactgccctg ctgccgacca tgcgcccatg ccgaagacca cgccccgtac gcgcaagcgc
      241 gccccacaag ccccctctcg cgtcgtgctc gccgagcgcc tggaagacgg cgtggccgtg
      301 gtgcgcctgc accgccccaa ggccaccaac gcgctgagcc tcgcgctgca ggcgcagctt
      361 gccgccgcgt tcgtcgaact ggccgccgac gaggccgtgc gctgcatcgt gctcaccggc
      421 ggcgagcagg tatttgccgc cggcggcgac atcaaggggc tggaacaggc cggcccgatc
      481 gaaatcatgc agcgccacac cgagcgcgtg tgggcgccga tcgagcaatg cccgaaaccg
      541 gtgatcgccg cggtgtgcgg ctacgcctat ggcggcggcg ccgagctggc gatgcactgc
      601 gacatcatca tcgccggcga aggcgcgcgt ttcgcgcagc cggaaatccg catcggcatc
      661 atgcccggca tcggcggcac ccagcgcctg gtgcgcgcgg tgggcaagtt caacgccatg
      721 cgcatgctgc tcaccggcaa gccggtcggc gccgccgagg cgcggctgat gggcctggtc
      781 agcgccgtgg tgccggacgc ccaggtgctg cctgaggcct tggccatggc ccgcaccatc
      841 gccgcgatgc cgccgctcgc ggcgcagcag atcaaggaag tggtgctggc cggcatggac
      901 gcgcccctcg gcgccgcgct ggcgctggag cgcaaggcca accagctgct gttcgccacc
      961 gtcgaccaga aggaaggcat gcaggccttc atcgagaagc gcaagccgcg tttccgcggc
     1021 cgctgacatc ccaacccgag tcatcgcgac gcagcaccgt cgccgccggt attgcgcgcg
     1081 tggatctctc cccgcacgcg catctccggc gcgatccgca cagacgtcta tttgccgcat
     1141 tgcagcgaca agacgcctgc gaccatccgc gcaattgact agtcccgtcg gacgatgcca
     1201 gcgagggggc actcggcgcg aagtagcccc gctactcgcc aacccgcggc gctccacgca
     1261 agggctgcgg catcccagac acctttcgca ggggagtttc gaaatgaaac gtcgtgcgct
     1321 ttcgtggcag atcagcctgc tgctggccgc caccgccacc gggttgatgg ccaccgccac
     1381 gcccagcccc gcgcaggaag cgccggacac ccagaacccg caggacgctc ccgccacccc
     1441 gccccccaag gccaaggcca agacgctgaa ggcgatggtg gtgaccgccg agcgccgcga
     1501 gcagaacatc caggcggtgc cgctcaccgt ctcggcgatg gaccaggccg aactcaatcg
     1561 gcgcggcatc accagcgtcg cggatttgaa cgccgtcgcg cccagcctgg tcgtcgtccc
     1621 ggaaaccgct ggctacacca ccggcgcgca attctcgctg cgcggcgaat tcgtcggcaa
     1681 cccggcgatg tactgggatt ccaccaccgg cgtgtacgtc aacggcgtgt acttcggcaa
     1741 gagcaaggtg gacgtgttca gcctgcccga cctcgagcgc atcgaagtgc tgaacggccc
     1801 gcaaggcacg ctgtacgggc gcaacaccat cggcggcgcg gtgaatatcg tcacgcagaa
     1861 accgagcggc gtgttcaccg gcaccgcaca ggcgggctac ggccgctacg gcgacaagac
     1921 cgtcatggcg cgcaccgacc tgcccgcatg gggcaagctc aacatttcgg tgggcggccg
     1981 ctacgaaaag cgcgacggct gggtcaagac cacgcccggc agctccgtat ccagcctggg
     2041 ccagctggac aacaaggacg cctacctcga catgctgctg aacgcgaccg acaacttgtc
     2101 gatcgagtac cgctacgact acaccagcgc gcacaacacg cccaacttca gccaggtggt
     2161 gcattcggac atccagcgga tgttccgcat ccccggcatc atcgtgaacc aggaccggca
     2221 gaccacggca agcgtcgatg cgccggtgtt cgaggatctg cgcaccgacg cgaacgcctt
     2281 gcacgtggac tggaaacttg gcgtgggcac gctcaagtac atcggcgcac acagcgagac
     2341 ccactacaac aacgggctgg atctggacgg ctcgccgatc ccgttcgcgc agagcgagga
     2401 gttcaaccgc tatcgcgaaa cctcgcacga gctgcagtac gtgggcagtg ccggcaactg
     2461 gaactgggta accggcctgt attacttcaa ggacgccggc ttcaacaaca acccgcagcg
     2521 ttacttcttc ggcgccgcaa ccttccagcc caacgagtac tggtacggca gccgctcgcg
     2581 cgcggcctac gggcaggtgg actacaagat cggcgagcgc tggacgatca ccgccggcct
     2641 gcgccgcacg ctggacgaaa aacgcgtcag ccgtgtcatg cagagcggcg cctacgtgc
//
LOCUS       DASSVL010000610         6739 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_833297, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000610 DASSVL010000000
VERSION     DASSVL010000610.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 6739)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6739)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6739
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_833297"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..520)
                     /locus_tag="VFM52_10605"
     CDS             complement(<1..520)
                     /locus_tag="VFM52_10605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008434615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TatD family hydrolase"
                     /protein_id="HET8765661.1"
                     /translation="MLIDSHVHLDHRVFDADRDDVIARAGAAGVWQLVIPAVDRPSWP
                     RIHALAARTVGRCFPAYGLHPLFVAADPEFDPAALATWCDAHACVAIGEIGLDFHATE
                     PAAALQRRCFAAQLALARERDLPVIVHARQSLEEVILTLRRYPGIRGVVHSFSGSEEQ
                     ARQLWRLGFRLGI"
     gene            706..1320
                     /locus_tag="VFM52_10610"
     CDS             706..1320
                     /locus_tag="VFM52_10610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008213908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine zipper 2TM domain-containing protein"
                     /protein_id="HET8765662.1"
                     /translation="MNRLMVNALNVAIAAALAVGLSACNRSADAGTGMAGAASAPVPA
                     QAAEPAPPVQPAGPQYAKVVSVTPVRSSSSTPRQVCHDEVVNHTAPPKDQHNIAGTAI
                     GAIAGGLLGNQIGGGKGRTLATVAGAVGGGYAGNRIENSHHKAQVTSTVERRCSTVTD
                     TSNKIVGYDVQYVYNGVTRTTRMDHDPGDRVQVQEGVSVVSDAR"
     gene            complement(1405..1839)
                     /locus_tag="VFM52_10615"
     CDS             complement(1405..1839)
                     /locus_tag="VFM52_10615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015448071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell wall hydrolase"
                     /protein_id="HET8765663.1"
                     /translation="MRLSMLLWLTSLMPQPVANQACLATTVYLEARSQPPIGQMAVAE
                     VAMRRRERGRWGDTVCDVVMAPRQFATTTTPGSFEITNLQAFHKAWEIAGRTIHDWQL
                     PASQRRILVPHADHFATVALNPSWSHRKPAMTIGGHTFYAVN"
     gene            2630..2797
                     /locus_tag="VFM52_10620"
     CDS             2630..2797
                     /locus_tag="VFM52_10620"
                     /inference="COORDINATES: protein motif:HMM:NF019511.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1674 domain-containing protein"
                     /protein_id="HET8765664.1"
                     /translation="MTDTKHSEESNPADATGGMAATPGKGEVSWDKVEKDDLEPTRYG
                     DWEKNGRCIDF"
     gene            2882..3277
                     /gene="sdhC"
                     /locus_tag="VFM52_10625"
     CDS             2882..3277
                     /gene="sdhC"
                     /locus_tag="VFM52_10625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007508947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045282 - plasma membrane succinate
                     dehydrogenase complex [Evidence IEA];
                     GO_function: GO:0000104 - succinate dehydrogenase activity
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase, cytochrome b556
                     subunit"
                     /protein_id="HET8765665.1"
                     /translation="MTDRPRPLSPHIQVYRWQIQMVTSILHRATGIALAGGTLLVVWG
                     VLALATSESAFELFKSCIGNPLGIILLVGWSWSLTYHLCNGVRHLVQDAGAGYQISQF
                     VRSSWLSVIGSIVLLVVIWAYVILAGGAA"
     gene            3274..3687
                     /gene="sdhD"
                     /locus_tag="VFM52_10630"
     CDS             3274..3687
                     /gene="sdhD"
                     /locus_tag="VFM52_10630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008434625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045282 - plasma membrane succinate
                     dehydrogenase complex [Evidence IEA];
                     GO_function: GO:0000104 - succinate dehydrogenase activity
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase, hydrophobic membrane
                     anchor protein"
                     /protein_id="HET8765666.1"
                     /translation="MTLRVGTDDVRSQLRDPMKHARGLGSAQAGVGHWWVQRLTAGAL
                     ILLGAWFVITVLGLLHADYAMAHATVAKPWNALLLILFIAIAFWHAVLGLQVVLEDYV
                     HTRWKEVAAMVAIKFVAVLAATAAVLAVLRIALGV"
     gene            3691..5478
                     /gene="sdhA"
                     /locus_tag="VFM52_10635"
     CDS             3691..5478
                     /gene="sdhA"
                     /locus_tag="VFM52_10635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020851880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA];
                     GO_process: GO:0022900 - electron transport chain
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase flavoprotein subunit"
                     /protein_id="HET8765667.1"
                     /translation="MESYKIQQHKYDVVVVGAGGAGLRATFGLAEKGLRAACISKVFP
                     TRSHTVAAQGGIAAALGNMGEDDWRFHFYDTVKGGDWLGDQDAVEFMCKNAPEAVIEL
                     EHYGVPFSRTEDGHIYQRPFGGMTTHYGKGTAQRTCAAADRTGHAILHTLYQQAIAHD
                     ATFFVEFFATDLIFDEEGTCLGVLALDMNAGELHFFRGHATVMATGGYGRAYFSCTSA
                     HTCTGDGGGMALRAGLALQDLEFVQFHPTGIYGAGCLITEGVRGEGGFLTNDKGERFM
                     ERYAPHAKDLASRDVVSRAITIEIREGRGVGAHKDHVFLNLMHLGPEVIHERLPGISE
                     SARIFAGVDVTKAPIPVLPTVHYCMGGIPTNYHGEVVQKKGDDVDAVVPGLFAIGEAA
                     CVSVHGGNRLGSNSLLDLVVFGRACADRLAEVIKPNTPHKDLPASILDKALDRFDKIR
                     NADGELPTAQIRTKMQRTMQNDAAVFRTAETLKEGCKNIDEVYDSFKQVKVTDRSLVW
                     NTDLIETLELANLLEQAVGTMHSAEQRPESRGAHAREDFPDRNDAEWLKHTLVKVDDA
                     GKTSFDYRPVHMYTLTDEVEMVQPKKRVY"
     gene            5499..6281
                     /locus_tag="VFM52_10640"
     CDS             5499..6281
                     /locus_tag="VFM52_10640"
                     /EC_number="1.3.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007808046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008177 - succinate dehydrogenase
                     (ubiquinone) activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase iron-sulfur subunit"
                     /protein_id="HET8765668.1"
                     /translation="MGEFALPKNSKIQPGKHHPAKNPQKPRNFRVYRWNPDKDENPRV
                     DTFEVDLADCGPMVLDALLKIKNEVDPTLTIRRSCREGVCGSCAMNINGTNTLACICA
                     IDRLKDGDVKIYPLPHMPVVKDLVPDLTHFYAQYASIKPWLRTQSAAPDKERLQSPED
                     RKKLDGLYECILCACCSTSCPSYWWNGDKYLGPAILLQAYRWIVDSRDEATGERLDDL
                     EDPFKLYRCHTIMNCTRTCPKGLNPAKAIAEIKKLMVERRSA"
     gene            6320..6619
                     /locus_tag="VFM52_10645"
     CDS             6320..6619
                     /locus_tag="VFM52_10645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014403066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase assembly factor 2"
                     /protein_id="HET8765669.1"
                     /translation="MRGLSRFSGTSTMGVETMDEARLKRIRWRLRRGTLELDAMLGDW
                     FEHVFPTADPALQEAFDALLDEQDPLIWDWLMDHARAPRADWATIIDDIRARHRL"
BASE COUNT         1212 a         2076 c         2279 g         1172 t
ORIGIN      
        1 cgatgccgag gcggaagccg agccgccaaa gctggcgagc ctgctcctcg ctgccggaaa
       61 agctgtgcac cacgccgcgg atgccggggt aacggcgcag cgtcaggatc acttcttcaa
      121 gggactggcg ggcgtgaacg atcaccggca ggtcgcgctc gcgtgccaag gccaactgcg
      181 cggcgaagca ccgacgttgc aaagctgccg cgggctcggt cgcgtggaag tccagcccga
      241 tctcgccgat ggcgacacag gcgtgagcgt cgcaccaggt ggccagtgcg gcgggatcga
      301 attcggggtc ggcggccaca aacaacggat ggaggccata agcgggaaaa caccggccga
      361 cggtacgtgc agccagggca tggatgcgcg gccaactggg tcgatccacc gccggtatca
      421 ccagctgcca aacccccgcc gcgcctgcac gggcgatgac gtcgtcacgg tcggcatcga
      481 acacgcggtg atcgagatgg acgtggctgt cgatgagcac ggtagggtcg aaattccgga
      541 tggcgcggct gcaggcatca atcgcgccga gatccgcgcg gcaggcaaag tgtaccggcc
      601 gcggtctagg tagtattcag acaaccgtgt gttcaatggc accgaggtcg cacgtggggc
      661 gggtggcagg tcatgcgacc agtactgata tggaggaaac ggacaatgaa cagattgatg
      721 gtcaatgcac tgaatgtggc gatcgcggcg gcgcttgctg ttggtctgtc ggcatgcaat
      781 cggagtgccg acgcgggtac cgggatggct ggggctgcga gtgcgccggt accggcgcag
      841 gcggcggaac cggctccgcc ggtgcagcct gccggcccgc agtatgcgaa ggtggtcagc
      901 gtgacgccgg tgcgctcgag ctcaagcacg ccgcgccagg tctgccacga cgaggtggtc
      961 aaccacacgg cgccgccgaa ggatcagcac aacattgccg gcaccgctat tggcgccatt
     1021 gccggcggcc tgctcggcaa ccagattggc ggcggtaagg gccggacgtt ggcgaccgtc
     1081 gcgggcgcgg tgggcggcgg ctatgccggc aaccgcatcg agaactcgca tcacaaggcg
     1141 caggtcacgt cgacggtcga gcgccgctgc agcacggtca ccgataccag caacaagatc
     1201 gtcggctatg acgtgcagta cgtgtacaac ggtgtgaccc gcacgacgcg catggaccat
     1261 gatccgggcg accgcgtgca agtacaggaa ggcgtgtcgg tggtgtccga cgcgcgctga
     1321 gtcgtcgcgc ccattcgggc gtccagagct ctgacggaaa aggccctcgc aagagggcct
     1381 tttcatcgat tccggcgggg cggttcagtt caccgcatag aacgtgtgtc cgccgatcgt
     1441 catcgccggc ttgcggtgcg accacgaggg gttcagcgcg acggtggcga agtggtcggc
     1501 gtgcggcacc agtatccggc gctggcttgc cggcagttgc cagtcgtgga tggtgcgtcc
     1561 ggcaatttcc caggccttgt ggaaggcctg caggttggtg atctcgaacg agcccggcgt
     1621 ggtggtggtc gcgaactggc gcggcgccat caccacgtcg catacggtgt cgccccagcg
     1681 gccgcgttca cgacggcgca ttgccacctc ggcgacggcc atctggccga tcggcggctg
     1741 gctgcgcgcc tcgagataca ccgtggttgc caggcaagcc tggttggcaa ccggctgggg
     1801 catcagcgac gtcagccaca acagcatcga aagtctcatg tctgcctcca gcgtgctgta
     1861 cgtgccggca atgcaaagcc ggacacgccg ttgcggtgga cgggcgggca gtccgtttcc
     1921 acctggatga accggcggcc gaaactcggg gccgtacggc ttgccacggg attgtggcga
     1981 tcgcacgaca tcgtcggtgt cgaacgagat tggcgctgca cggccggtat cgcgctatcg
     2041 ataccgtggg acctgcaaca aaccccgcca tctcaggcgg tattccatcc ggttggggac
     2101 cgggtcgcgc cgatgcggaa acttccggtt cgtcgcgtgc ttcggcaacc gtgggtggcg
     2161 gttgccgcga tgtgaggtgg caggagacta gcgacggttt tttcgcatcg caagtgccgc
     2221 gtcaatttgg catacccagg caaaccgcat gacgacgttg aaactgaatg catattcagc
     2281 caacgcttct tggcattcag tttcccatcg cggttcgcga tggtttcggt aatgcgctga
     2341 ttagacgtct ttacatagag acgtctatac gtctatatga tatttatgta aacggatgtt
     2401 atgcggtggc tttgcggccg tggagagaca ggtcgatccg cgagatatgg gcggcagctg
     2461 ccgtgcgcct tgttcggaac caatcgattg cctggctcac ggcagctgcc gccgctgccg
     2521 gcgcgcgggg cggggtgcgc ggcaggggtt gaagcaccgc acgcggccag cgtcaaggtt
     2581 gtgcgctacg atgtcgcgta ctaaccttcg acggctcgca gtgaagacca tgactgacac
     2641 gaagcactcc gaagaatcca accccgcgga tgcgactggt ggaatggccg ctacgcccgg
     2701 gaaaggggaa gtgtcgtggg acaaggtcga gaaggatgac ctcgaaccga cccgctacgg
     2761 tgattgggaa aagaacggac gttgcatcga cttctgacgc gccttgccgc gacggcacag
     2821 gtcgtgcggg tgtttccctc tggtactgct gcatcagcga ttccatccaa ggatagccgt
     2881 catgaccgat agaccgcgcc cgctttctcc gcatatacag gtgtatcgct ggcagataca
     2941 gatggtgaca tccatcctgc atcgtgccac cggcattgcc ttggcaggcg ggaccttgtt
     3001 ggtggtgtgg ggcgtgctcg cgctggccac cagcgaatcg gcgttcgagc tgttcaagtc
     3061 ctgcatcggc aatccgctcg gcatcatcct gttggtcggc tggagctggt cgcttaccta
     3121 tcatttgtgc aacggcgttc gccatctcgt gcaggacgct ggcgcgggct accagatttc
     3181 gcagttcgtg cgttcgagct ggctgtcggt gatcggcagc atcgtgctgc tggtcgtcat
     3241 ctgggcatat gtgatcctgg ccggaggtgc ggcatgactc ttcgcgttgg caccgacgac
     3301 gtgcgcagcc agctgcgcga cccaatgaag catgcgcgtg gcctgggctc ggcccaggct
     3361 ggcgtcgggc actggtgggt gcagcgtctg acggcagggg cgctgatcct gctcggcgcg
     3421 tggttcgtca ttaccgtcct tggcctgctg catgccgact acgcgatggc gcacgcgacc
     3481 gtggccaagc cgtggaacgc gctgctgctg atcctgttca tcgccatcgc gttctggcat
     3541 gcggtgctcg gcctgcaggt ggtgctggag gactacgtgc acacccgctg gaaggaggtg
     3601 gcagccatgg ttgccatcaa gttcgtcgcc gtgctcgctg cgaccgcggc ggtgctcgcc
     3661 gtgctgcgca tcgctttggg agtctgagac gtggaaagct acaagatcca gcagcacaaa
     3721 tacgacgtgg tcgtggtcgg cgccggtggc gccggcttgc gtgccacctt cggcctcgcc
     3781 gagaaaggcc tgcgcgcggc gtgcatttcc aaggtgtttc cgacccgctc ccacaccgtg
     3841 gccgcgcagg gcggcattgc tgccgcgctc ggcaacatgg gcgaggacga ctggcgcttc
     3901 cacttctacg acaccgtgaa ggggggcgac tggctgggtg accaggacgc ggtcgagttc
     3961 atgtgcaaga acgcacccga ggcggtgatc gagctggagc actacggcgt gccgttctcg
     4021 cgcaccgagg atggccacat ctaccagcgc ccgttcggcg gcatgaccac gcattacggc
     4081 aagggcacgg cgcagcgtac ctgcgcggct gccgaccgca cggggcacgc gattctgcac
     4141 acgctgtacc agcaggcgat cgcgcacgac gcgacgtttt tcgtggagtt cttcgccacc
     4201 gacctgatct tcgacgagga aggcacctgc ctcggcgtgc tggcgctcga catgaacgcc
     4261 ggcgagctgc atttcttccg tggccatgcg acggtgatgg cgaccggcgg ctacggccgc
     4321 gcctatttca gctgcacctc ggcgcacacc tgcacgggcg acggcggcgg catggcgctg
     4381 cgcgccgggc tggcgctgca ggatctggag ttcgtccagt tccacccgac cggcatctac
     4441 ggtgcgggct gcctgatcac cgagggcgtg cgtggcgagg gtggtttcct caccaacgac
     4501 aagggtgagc gcttcatgga acgctatgcg ccgcatgcga aagacctcgc ttcgcgcgac
     4561 gtggtgagcc gcgcgatcac gatcgagatc cgcgaaggcc gtggcgtcgg tgcgcacaag
     4621 gaccacgtgt tcctgaacct gatgcacctc ggtcccgagg tcatccacga gcggctgcca
     4681 gggatttccg agtcggcgcg catcttcgcc ggcgtcgacg tcaccaaggc gccgattccg
     4741 gtgctgccga ccgtgcatta ctgcatgggc ggcatcccga ccaactatca cggcgaagtg
     4801 gtgcagaaga agggcgacga cgtcgacgca gtcgtgccgg ggctgttcgc catcggcgag
     4861 gcggcttgtg tttcggtgca cggcggcaac cgcctggggt cgaactcgct gctcgacctg
     4921 gtcgtgttcg gccgcgcctg cgcggatcgc ctggcggagg tcatcaagcc gaataccccg
     4981 cacaaggacc tgccggccag catcctggac aaggcgctcg atcgcttcga caagatccgc
     5041 aatgccgacg gcgagctgcc gaccgcgcag atccgcacca agatgcagcg cacgatgcag
     5101 aacgacgccg ccgtgttccg cactgcggaa acgctcaagg aaggctgcaa gaacatcgac
     5161 gaggtctatg actcgttcaa gcaggtcaag gtcaccgacc gctcgctggt gtggaacacc
     5221 gacctcatcg agaccctcga gctggccaac ctgctggagc aggcggtggg caccatgcat
     5281 tcggccgagc agcgcccgga aagccgcggc gcgcatgcgc gcgaggattt ccccgaccgc
     5341 aacgatgccg agtggctcaa gcacaccctg gtcaaggtcg acgacgccgg caagaccagc
     5401 ttcgattacc gcccggtgca catgtacacc ttgaccgacg aggtggagat ggtgcagccg
     5461 aagaaacgcg tttactgatc ccggattgga gagccgcaat gggagagttt gctttaccca
     5521 agaattccaa gatccagccg ggcaagcatc atccagcgaa gaatccgcag aagccacgca
     5581 acttccgcgt ctaccgctgg aacccggaca aggatgaaaa cccgcgcgtc gataccttcg
     5641 aggtggatct ggccgattgc ggcccgatgg ttctggacgc gctgctgaag atcaagaacg
     5701 aagtcgaccc cacgctgacc atccgtcgca gctgccgcga aggcgtatgc ggttcgtgcg
     5761 cgatgaacat caacggtacg aacacgctgg cgtgcatctg cgcaatcgac cgcctgaagg
     5821 acggcgacgt caagatctac ccgttgccgc acatgccggt ggtcaaggac ctggtgcccg
     5881 acctgacgca tttctacgcg caatacgctt cgatcaagcc gtggctgcgc acgcagagcg
     5941 cggcgccgga caaggagcgc ctgcagtcgc cggaggatcg caagaagctc gacggcctgt
     6001 acgagtgcat cctgtgcgcg tgctgctcga cgagctgccc gagctactgg tggaacggcg
     6061 acaagtacct gggcccggcg atcctgctgc aggcgtaccg ctggatcgtc gacagccgcg
     6121 acgaggccac cggtgagcgc ctcgatgacc tcgaggatcc gttcaagctg tatcgctgcc
     6181 acaccatcat gaactgcacg cgcacttgcc cgaagggcct gaacccggcc aaggcgatcg
     6241 cggagatcaa gaagttgatg gtggagcgcc gttcggcctg aggcctgcaa ccgcatcgag
     6301 aacgacgcga caggccgcca tgcgcggcct gtcgcgtttc agcggtacgt caacgatggg
     6361 agtcgagaca atggacgaag cgcgtttgaa acgcatccgc tggcgactgc gccgcggcac
     6421 gctggagctg gacgcaatgc tcggtgactg gttcgagcat gtcttcccga ccgccgaccc
     6481 ggccttgcag gaggcgttcg acgccttgct cgacgagcag gatccgctca tctgggattg
     6541 gctgatggac catgcccgcg cgccgcgcgc cgactgggcg acgatcatcg atgacatccg
     6601 cgcccgccat cggctttgag taccggccct cacgctggct gccgcgtctg ctgctgaccg
     6661 ttgcgatcct ggccgtgttg gcggcgctgt tgagcggatt ttcgtggtgg ctgaaggcgg
     6721 cgctgctcgt tgccgtggt
//
LOCUS       DASSVL010000611         2040 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_1115929,
            whole genome shotgun sequence.
ACCESSION   DASSVL010000611 DASSVL010000000
VERSION     DASSVL010000611.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 2040)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2040)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2040
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1115929"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1969
                     /locus_tag="VFM52_10650"
     CDS             <1..1969
                     /locus_tag="VFM52_10650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007807515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0009060 - aerobic respiration [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="cbb3-type cytochrome c oxidase subunit I"
                     /protein_id="HET8765670.1"
                     /translation="QAQFGTALVALDAGQQAAVRAETAVSLKTNRFDAASDTLTLTPP
                     EAAAWQAQIAHWAEYFKHPERNGGLKPNLISDTAELRQFSAFVAWAAWASVANRPGYD
                     YSYTNNFPYDPLVGNLPIPGAFLWSALSLMVLLGGIAVVLLMFGKFDYLGWISHGHRL
                     TPAIVPGEASPGQRALVKFFVVVAALFLFQTLVGGATAHYRADPGSFYGFQLETIFPS
                     NLMRTWHLQSAIMWIATAYVAAALFLGRSLRTDEPRGMAVWAHLLFAAFIAVIAGSLL
                     GEWAGMSNLLGDWWFWLGNQGWEYLELGRIWQYLLVVGLVVWFAVLYWIARPSKVANP
                     DVRPVGRMFLLAAVAIPVFYIPALFYGEHTNLTVVETWRFWIIHLWVEGFFEFFATTV
                     VALTFVQVGLTHHNTAMRVIYLDAILYFLGGLIGTGHHWYFVGHVQFNMAMSALFSAL
                     EVVPLTLLTLDAWDFVRTTKGEVGIDGTSHRVPHKWTFYFLMAVGFWNFVGAGMFGFL
                     INLPIVSYFEVGTQLTPNHGHAALMGVFGMLAIALMVFVLRQTASDKHWPGIEKYIKV
                     AFWGTNAGLVLMIVMSLFPSGVLQIRDVLEHGYWHARSVDYMAMPRSHLIEWLRLPGD
                     LVFIIFGSIPLFIASIKAWLGVRADAADRMA"
BASE COUNT          291 a          666 c          699 g          384 t
ORIGIN      
        1 gcaggcgcaa ttcggcaccg cgctggtggc gctggatgcc gggcagcagg ccgcagtgcg
       61 ggccgaaacc gcggtgtcgc tcaagaccaa ccggtttgac gcggccagcg acacgctcac
      121 gctgacgccg cccgaggccg cggcatggca ggcgcagatc gcgcactggg ccgaatactt
      181 caagcacccc gagcgcaacg gcgggctcaa gccgaacctc atcagcgaca cggcggagct
      241 gcgccagttc agcgcgttcg tcgcgtgggc ggcgtgggca tccgtcgcga accggccggg
      301 ctacgactac tcctacacca acaacttccc gtatgacccg ctggtcggca acctgccgat
      361 ccctggcgcg ttcctgtgga gcgcgttgag cctcatggtg ctgctgggcg gcatcgcggt
      421 ggtgctgctg atgttcggca agttcgacta cctcggctgg atttcgcacg gccaccggct
      481 cacgccggcg atcgtgcccg gggaggccag ccctggccag cgcgcgctgg tgaagttctt
      541 cgtggtggtc gccgcgctgt tcctgttcca gacgctggtc ggcggcgcga cggcgcacta
      601 ccgcgccgac ccgggcagct tctacggctt ccagctggaa accatctttc ccagcaacct
      661 gatgcgcacc tggcacctgc agagcgcgat catgtggatc gcgacggcct acgtcgcggc
      721 cgcgctgttc ctcggccgct cgctgcgcac ggacgagccg cgcggcatgg cggtgtgggc
      781 acacctcctc ttcgcggcgt tcatcgcggt gatcgccggc agcctgctcg gcgaatgggc
      841 gggcatgtcg aacctgctcg gtgactggtg gttctggctc ggcaaccagg gctgggagta
      901 cctggagctg ggccgcatct ggcagtacct gctggtggtc gggctcgtcg tctggttcgc
      961 ggtgctgtac tggatcgcgc ggccatccaa ggtggccaac ccggacgtgc gcccggtcgg
     1021 gcggatgttc ctgctggccg cggtcgcgat tccggtgttc tacatcccgg cgctgttcta
     1081 cggcgagcac accaacctca cggtggtcga gacctggcgg ttctggatca tccacctgtg
     1141 ggtcgagggc ttcttcgagt tcttcgccac cacggtggtc gcgctcacct tcgtgcaggt
     1201 gggcctcacc caccacaaca cggcgatgcg ggtgatctac ctcgacgcca tcctgtactt
     1261 cctcggcggc ctgatcggca ccggccacca ctggtacttc gtcggccacg tgcagttcaa
     1321 catggcgatg tcggcgctgt tctcggcgct ggaggtggtg ccgctgacgc tgctcacgct
     1381 cgacgcctgg gatttcgtgc gcaccacgaa gggcgaggtc ggcatcgacg gaacgtcgca
     1441 ccgggtgccg cacaagtgga cgttctactt cctaatggcg gtgggtttct ggaacttcgt
     1501 cggcgccggc atgttcggct tcctgatcaa cctgccgatc gtcagctatt tcgaggtcgg
     1561 cacccagctc acgccgaacc acgggcatgc cgcgctgatg ggcgtgttcg gcatgctggc
     1621 gatcgcgctg atggtgttcg tgctgcgcca gaccgcgagc gacaagcact ggccgggcat
     1681 cgagaagtac atcaaggtcg cgttctgggg caccaacgcg ggactggtgc tgatgatcgt
     1741 gatgagcctg ttcccgagcg gcgtgctgca gatccgggac gtgctggagc atggctactg
     1801 gcacgcacgc agcgtggact acatggcgat gccgcgctcg cacctgatcg agtggctgcg
     1861 cctgccgggg gatctggtgt tcatcatctt cggctcgatc ccgctgttca tcgcgtcgat
     1921 caaggcgtgg ctcggcgtgc gcgcggatgc cgccgatcgc atggcctgaa gtccacgggt
     1981 ggtggcaacg aaaaccccgc gccgattgcc cggcgcgggg ttttgtttgg gcggtgcggc
//
LOCUS       DASSVL010000612         4111 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_776818, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000612 DASSVL010000000
VERSION     DASSVL010000612.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 4111)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4111)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4111
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_776818"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..258)
                     /locus_tag="VFM52_10655"
     CDS             complement(<1..258)
                     /locus_tag="VFM52_10655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007081358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HET8765671.1"
                     /translation="MTVSAAPPVLQLDHVGRCRAGRMVIEDLSLELGAGQVLALLGVN
                     GAGKSTTLAMIAGALRPDAGHIRIGGQDVAGAPEATGRLVGW"
     gene            407..1600
                     /locus_tag="VFM52_10660"
     CDS             407..1600
                     /locus_tag="VFM52_10660"
                     /EC_number="1.14.19.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015448897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid desaturase"
                     /protein_id="HET8765672.1"
                     /translation="MSDSVLSFLSNGLTHLGWVGILVYLLVVTQLTIFTVTLYLHRSQ
                     THRGVDFHPVLAHFFRFWGWLSTGMVTREWVAVHRKHHAKVETPEDPHSPVVYGINKV
                     FWDGVSLYRDACHVKADMEKYGRGTPDDWVEHKVYSAHPYWGPALMAVIDLALFGVIG
                     GAVWAVQMIWIPFWAAGFVNGVGHWAGYRNFETTDTSRNLIPWGFWIGGEELHNNHHA
                     FPSSAKFALRKWEFDIGWAAICGLRAVGLAKVLRVAPTLDVRPNVTLPDAETLKAVLT
                     HRIEAMTDFYRQVIMPTLRGEAQRAGDNLKAVPRRLRRALANGGRWLDADGNGKLQAV
                     LAKRPQLKVVCEFRSRLAALLDQRGADQALKGLQQWIREAEESGIHALQEFAERLKGY
                     AATSA"
     gene            complement(1672..2193)
                     /locus_tag="VFM52_10665"
     CDS             complement(1672..2193)
                     /locus_tag="VFM52_10665"
                     /inference="COORDINATES: protein motif:HMM:NF022893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3016 domain-containing protein"
                     /protein_id="HET8765673.1"
                     /translation="MIFRILAYALLATGALLATPAPATDTPAGNVSVTYDHPDQFTET
                     RKMRTFAPSRLDDGYLKTLKAWIEARAGKMLPAGDRLDIVVTDIDRAGSFEPWLGPRL
                     QDVRIIKDIYPPRIDLRFRLTGANGRLLREGTRKLTDPGFMYDSPSRIGSDNLRYEKA
                     LLDRWLAKGPDKL"
     gene            complement(2328..2495)
                     /gene="rpmG"
                     /locus_tag="VFM52_10670"
     CDS             complement(2328..2495)
                     /gene="rpmG"
                     /locus_tag="VFM52_10670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001051801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L33"
                     /protein_id="HET8765674.1"
                     /translation="MAKSSSDKIRLISSAGTGHFYTTKKNKKNTPEKFEFKKYDPVVR
                     KHVIYKEGKIK"
     gene            complement(2506..2742)
                     /gene="rpmB"
                     /locus_tag="VFM52_10675"
     CDS             complement(2506..2742)
                     /gene="rpmB"
                     /locus_tag="VFM52_10675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019185625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L28"
                     /protein_id="HET8765675.1"
                     /translation="MARVCQVTGKGVQSGNNVSHANNKTRRRWLPNLHERRFWVPSEK
                     RWIKLRVSNHALRTIDKKGIEAVVAELRARGEKI"
     gene            3055..3558
                     /gene="secB"
                     /locus_tag="VFM52_10680"
     CDS             3055..3558
                     /gene="secB"
                     /locus_tag="VFM52_10680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007810352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051082 - unfolded protein binding
                     [Evidence IEA];
                     GO_process: GO:0015031 - protein transport [Evidence IEA];
                     GO_process: GO:0051262 - protein tetramerization [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein-export chaperone SecB"
                     /protein_id="HET8765676.1"
                     /translation="MAQEINNDQANGQASQPQLVMQKIYVKDVSFEAPNAPQIFQEID
                     ENAQPQVQLNLGQKASDLGNDLYEVVLSLTLTCTVGQRTAYLAEVEQAGVFGIAGFGD
                     TDKAGILGSYCPNLLFPYARQVISSMVLEGGFPPFLLQPINFDALFAEQLRRGAGGDE
                     APVMLNS"
     gene            3568..>4111
                     /locus_tag="VFM52_10685"
     CDS             3568..>4111
                     /locus_tag="VFM52_10685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015448896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-dehydropantoate 2-reductase N-terminal
                     domain-containing protein"
                     /protein_id="HET8765677.1"
                     /translation="MPDKPKLTVLGAGSWGTALAALGARNGVPTRLWGRDADALAQMA
                     QQRSNARYLPGVTMPEALGYEADLGAAVRGADIVLIVVPSHAFAAMLDALAPLLDAGT
                     AIAWATKGFEPGTGRFLHELVAEKLPGRPAAVITGPSFAREVATGLPSAVTVHSDDDA
                     FAQQLAGLLHAPNLRAYSGGD"
BASE COUNT          650 a         1338 c         1410 g          713 t
ORIGIN      
        1 ccagccgact aggcggccgg tggcttccgg cgccccggcg acgtcctggc caccgatgcg
       61 gatgtgcccg gcgtccggtc gcaacgcgcc ggcgatcatc gccagcgtcg tcgacttgcc
      121 ggcgccgttc acgcccagca acgccagcac ctgcccggcg ccgagttcga ggctcaggtc
      181 ctcgatcacc atgcgcccgg cgcggcagcg gccaacgtgg tcgagttgca ggacgggggg
      241 cgccgcggaa acggtcatcc ggcgattgtc cgtgggcgcg cgcctgcaca caaccggcga
      301 cactgcggcc ggtttaacga aagtggaaac cgtggcgtcg taacatgctg gctggtatgg
      361 cgtttccagc ctagacttga tccttgtttg cccgggtact tcatcgatgt ccgatagcgt
      421 gctgagcttc ctgtccaacg gcctcaccca cctggggtgg gtcggcatcc tggtgtatct
      481 cctggtcgtc acccagctca cgatcttcac cgtgacgctg tacctgcatc gcagccagac
      541 ccatcgcggc gtggatttcc atccggtgct ggcgcacttc ttccgcttct ggggctggct
      601 cagcaccggc atggtcaccc gcgaatgggt cgccgtgcac cgcaagcacc acgccaaggt
      661 cgagaccccg gaggatccgc acagcccggt cgtgtacggc atcaacaagg tgttctggga
      721 cggcgtctcg ctgtaccgcg atgcctgcca cgtcaaggcc gacatggaaa agtacggccg
      781 cggcacgccg gacgactggg tcgaacacaa ggtctacagc gcgcatccct attggggccc
      841 cgcgctgatg gcggtgatcg acctcgcgct gttcggcgtg atcggcggcg cggtgtgggc
      901 ggtgcagatg atctggatcc cgttctgggc cgccggcttc gtcaatggtg tcggccactg
      961 ggccggctac cgcaatttcg aaaccaccga cacctcgcgc aacctgattc cgtggggctt
     1021 ctggatcggc ggcgaggagc tgcacaacaa ccatcatgcc ttccccagct cggcgaagtt
     1081 tgcgctgcgc aagtgggagt tcgacatcgg ctgggcggcg atctgcggcc tgcgcgccgt
     1141 cggcctggcc aaggtgctgc gcgttgcgcc gacgctcgac gtgcgcccga acgtcacctt
     1201 gccggacgcg gaaacgctga aggccgtgct gacccaccgc attgaggcga tgaccgattt
     1261 ctaccgccaa gtcatcatgc cgacgctgcg cggcgaggcg cagcgcgcgg gcgacaacct
     1321 caaggcggtg ccgcgtcgac tgcgccgtgc gctggccaac ggcggccgct ggctggatgc
     1381 cgacggcaac ggcaagctgc aggcggtgct ggcgaagcgg ccgcagctca aggtggtgtg
     1441 cgagttccgt tcgcgcctgg cggcgctgct cgaccagcgc ggtgccgatc aggcattgaa
     1501 gggcctgcag cagtggatcc gcgaagccga ggaaagcggc atccatgcgc tgcaggagtt
     1561 tgccgagcgg ctcaagggct acgcggcaac cagcgcctga cgccacgcgt cccggatgac
     1621 acaagaggcc cgccgtctgg cgggcctttg cgttgccgcg ggtgcggagg ctcagagctt
     1681 gtccggcccc ttggccagcc aacggtcgag cagcgccttt tcgtagcgca ggttgtccga
     1741 gccgatgcgc gacgggctgt cgtacatgaa gccggggtcg gtcagcttgc gcgtgccctc
     1801 gcgcagcagc cggccgttgg cgccggtcag gcggaagcgc aggtcgatcc gcggcgggta
     1861 gatgtccttg atgatgcgca cgtcctgcag gcgcgggccc agccacggct cgaagctgcc
     1921 ggcgcggtcg atatcggtca ccacgatgtc gaggcggtcg ccggcgggca gcatcttgcc
     1981 ggcgcgggcc tcgatccagg ccttgagcgt cttcaggtaa ccgtcgtcca gccggctggg
     2041 cgcgaatgtg cgcatcttgc gcgtttcggt gaactggtcg gggtggtcgt aggtgacgct
     2101 gacgttgccg gccggcgtgt cggtggcggg ggccggggtg gccagcaacg cgccagtggc
     2161 cagcaatgcg tacgcaagga tgcggaagat catggcggcc tccggaacgg gtatcgatat
     2221 ccaccataac gcccgcgcgc cgtggcggtg cacgggcacg aaaaacccgc cacgcgggcg
     2281 ggttctccgg aaacgcgtcc cggcttccgc cggggtggcg ccaagactta cttgatcttg
     2341 ccttccttgt agatcacgtg cttgcgcacg accggatcgt acttcttgaa ctcgaacttt
     2401 tccggggtgt tcttcttgtt cttcttcgtc gtgtagaagt ggccggtgcc ggccgaggaa
     2461 atcaggcgaa tcttgtcact ggaactcttg gccatgatgg tctcctcaga tcttctcgcc
     2521 gcgggcacgc agctcggcta ccacggcctc gatgcccttc ttgtcgatgg tgcgcagcgc
     2581 gtggttggaa acgcgcagct tgatccagcg cttctcgctg ggcacccaga agcgacgctc
     2641 gtgcaggttg ggcaaccagc ggcggcgggt cttgttgttg gcgtgcgaga cattgttgcc
     2701 gctctgcaca ccctttccgg tgacttgaca tacacgggcc atgacgacct cccaagaatg
     2761 gcttcggttg aagccgtgat tgccacccgt tggccagggc ggcatcggcc cagcgacgcg
     2821 gtgcgccacg caatgccgga ggtgttgcat ggcccggtcg cgtgggtccg cattgcgtgg
     2881 cggaccaccc ggagaaccgg gccgacatga ggcgagccgc gcattgtcgc agaaacaagc
     2941 ggttgggcgc aatcctcgga cgcccgttca agggtgcgga tgggtgcgcc agacggggat
     3001 gtatggaaca atcagcctct ttgcttgacc gcccgtcttt gagaggacca cccgatggca
     3061 caagagatca acaacgacca ggccaacggc caggccagtc agccgcagtt ggtgatgcag
     3121 aagatctacg tgaaggacgt ctccttcgag gcgcccaacg cgccgcagat cttccaggag
     3181 atcgacgaga acgcgcagcc gcaggtgcag ctgaacctgg gccagaaggc cagcgatctg
     3241 ggcaacgacc tgtatgaagt ggtgctcagt ctgaccctga cctgcacggt cggccagcgc
     3301 acggcgtacc tggcggaagt ggagcaggcg ggcgtgttcg gcatcgccgg tttcggcgac
     3361 accgacaagg ccggcatcct gggcagctat tgcccgaacc tgctgttccc gtatgcgcgc
     3421 caggtgattt cctcgatggt gctcgaaggc ggcttcccgc cgttcctgtt gcagccgatc
     3481 aatttcgacg cgctgttcgc cgaacagttg cgccgtggtg ccggtggcga cgaagccccg
     3541 gtgatgctca acagctgagc ttcgggcatg cctgacaagc cgaagctgac cgtgctcggc
     3601 gcgggctcct ggggcacggc tctggccgcg ctcggcgccc gcaacggcgt acccacccgg
     3661 ctatggggcc gcgatgccga cgcgctggcg cagatggcgc agcaacgcag caatgcgcgc
     3721 tacctgccag gcgtcactat gccggaggcg ttgggctacg aggcggatct cggcgcggcc
     3781 gtgcgcggcg ccgatatcgt gctgatcgtg gtgcccagcc atgcgttcgc cgcgatgctc
     3841 gacgcactcg cgccgctgct cgacgcgggc accgcgatcg cctgggcgac caagggtttc
     3901 gaacccggta ccgggcgttt cctgcacgaa ctggtggcgg aaaagttgcc gggccggccg
     3961 gcggcggtca tcaccgggcc gtccttcgcc agggaggtgg ccaccggtct gcccagcgcg
     4021 gtcaccgtgc attcggacga cgatgccttc gcgcaacaac tcgccggcct gctgcatgcg
     4081 cccaacctgc gcgcgtactc cggcggcgac g
//
LOCUS       DASSVL010000613         3278 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_112870, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000613 DASSVL010000000
VERSION     DASSVL010000613.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3278)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3278)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3278
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_112870"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2348)
                     /locus_tag="VFM52_10690"
     CDS             complement(<1..2348)
                     /locus_tag="VFM52_10690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015448733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6600 domain-containing protein"
                     /protein_id="HET8765678.1"
                     /translation="MRVLTTTSTLRRRAVPWLAALLLMAGAALAHAQSSDDAGAPPPD
                     RVARLSYVSGDLGLLPAGATDWGDADLNRPLTTGDKLSTGDGARAELELGGGTLRMAG
                     NTDFGMLNLSDELAQVELTHGTLNLDVRRLDQGQSYEIDTPTLALVVTQPGNFRIDVG
                     NDGDGTQVTVFDGQATVYGENNAQRDVLAGRHYQFDDASLGSLMISDIQGEDAFDAWC
                     DQRNQRYAQAPMQRYVPDDMVGAQDLDQYGDWRASPEYGAVWYPRAMPVGWAPYRYGH
                     WAWIAPWGWTWVDDSPWGFAPYHYGRWAMIGGAWGWVPGPVFARPVYAPALVAFVGGG
                     GWSVGIGVGTAPVGWFPLGPGEIYNPWYHVDRNYYQRVNITNIYVHNTYNRTTVINHI
                     DRQYNDYRSGRLPPNLRYANRDSTRGFTAVPGKAFAGGMRVQRDQLRIDPRHLTAAPV
                     LAHGVTTVHPTPASFTPTRRAQARPLPTADFRRDVVAHTPPPAALANTRAPFTPAPAR
                     PTGAPAARPFTNVRVLNARNNRPDMPRPEDASARPSPAPAQQPATTATETPRAPGRRF
                     APRGEVATPLPSGALPSSRFAHPGTMPDAAPGRRMDDARPPRQEPGNPAQPAMSDRTP
                     TPQHLPQPPRFERAQPQGNPDTAGQMQAGPRYEAPRPAEAAPRYMPPQREPTMPREQQ
                     TPRYEAPRQDLPRPAEAAPHYTPPQREPAMPREQQTPRYEAPRQDLPRPAEAAPRYMP
                     AMPREQPMPRYEAPRAPYQAPQRYEPPRPAQQQPRRAEPAPR"
     gene            2528..2601
                     /locus_tag="VFM52_10695"
     tRNA            2528..2601
                     /locus_tag="VFM52_10695"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2560..2562,aa:Gly,seq:ccc)
     gene            2664..>3278
                     /locus_tag="VFM52_10700"
     CDS             2664..>3278
                     /locus_tag="VFM52_10700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007509418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016881 - acid-amino acid ligase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RimK family alpha-L-glutamate ligase"
                     /protein_id="HET8765679.1"
                     /translation="MKIAILSRNARLYSTQRLVDAARARGHVVRVLDPLRCYVRVAPG
                     SAAIRYKGRPVRDIDAAIPRISAHSTFYGTAVLRQLEMMGVYTPNPSDAVLRARDKLR
                     SLQILAAQGIAMPVTVFGDNPDDTEDLLAMLGEPPHVIKLNEGSQGTGVVLAEKRSAS
                     QSVIEAFRGLYANFLVQQFVREANGRDIRCFVVGDKVVAAMQREA"
BASE COUNT          395 a         1106 c         1259 g          518 t
ORIGIN      
        1 ttgcgcggcg caggctcggc gcggcgtggt tgctgttgcg ccggacgcgg cggctcgtag
       61 cgttgcggtg cctggtacgg cgcgcgcggt gcttcgtaac gcggcattgg ctgttcgcgc
      121 ggcatcgccg gcatgtagcg cggcgcggct tcggcggggc gcggcaggtc ttggcgcggg
      181 gcttcgtagc gcggtgtctg ctgttcgcgc ggcatcgccg gttcgcgttg cggtggcgtg
      241 tagtgcggcg cggcttcggc ggggcgcggc aggtcttggc gcggggcttc gtagcgcggt
      301 gtctgctgct cgcgcggcat tgtcggctcg cgctgcggcg gcatgtagcg cggtgcggct
      361 tcggccgggc gcggcgcttc gtagcgcggg ccggcctgca tctgcccggc ggtgtccggg
      421 ttgccctgcg gctgggcgcg ttcaaagcgc ggcggctgcg gtaggtgctg cggcgtcggc
      481 gtgcggtcgg acatggccgg ctgcgcgggg ttgcccggct cctggcgcgg cggacgcgcg
      541 tcatccatgc gacggcccgg cgctgcatcc ggcatcgtgc ccgggtgggc gaagcgcgac
      601 gagggcagtg cgcccgacgg tagcggcgtg gccacttcgc cacgcggcgc gaagcgcctg
      661 ccaggcgcgc gcggggtttc cgtcgcagtc gtggccggct gttgtgcagg tgccggcgaa
      721 gggcgggccg aggcgtcttc cgggcgcggc atgtcggggc ggttgttgcg cgcattcagc
      781 acgcgcacgt tggtgaacgg ccgtgcggcc ggcgcgccgg ttggccgcgc cggtgccggg
      841 gtgaatggcg cgcgggtgtt ggcgagcgcc gccggcggcg gcgtgtgggc gacgacgtcg
      901 cggcggaagt cggcggtggg cagcggccgc gcctgcgcgc gccgcgtcgg cgtgaagctg
      961 gccggcgtcg ggtgcaccgt ggtcacgccg tgcgccagca ccggcgcggc ggtgaggtgg
     1021 cgcgggtcga tgcgcagctg gtcgcgctgc acgcgcatgc cgcccgcgaa cgccttgccc
     1081 ggcaccgccg tgaaaccgcg cgtcgagtcg cggttggcgt agcgcaggtt gggcggcagc
     1141 cggccgctgc gatagtcgtt gtactggcgg tcgatgtggt tgatgaccgt ggtgcggttg
     1201 taggtgttgt gcacgtagat gttggtgatg ttcacccgct ggtagtagtt gcgatcgacg
     1261 tggtaccagg ggttgtagat ctcgcccggg ccgagcggga accagccgac cggcgcggtg
     1321 ccgacgccga tgccgacgct ccagccgcca ccgccgacga aggccaccag cgccggtgca
     1381 tacaccggac gcgcgaagac cggtcccggc acccagcccc aggcgccgcc gatcatcgcc
     1441 caccggccgt agtggtaggg ggcgaagccc cacggcgagt cgtccaccca ggtccagccc
     1501 cacggtgcga tccacgccca atggccgtag cggtacggtg cccagcccac cggcatggcc
     1561 cgcgggtacc acaccgcgcc gtactcgggg ctggcccgcc agtcgccgta ctggtcgagg
     1621 tcctgcgcgc cgaccatgtc gtccggcacg tagcgctgca tcggcgcttg cgcatagcgc
     1681 tggttgcgct ggtcgcacca ggcgtcgaac gcgtcttcgc cctggatgtc gctgatcatc
     1741 agcgagccga gcgaggcgtc gtcgaactgg tagtggcgcc cggccagcac gtcgcgctgc
     1801 gcgttgtttt cgccgtacac cgtggcctgc ccgtcgaaca ccgtcacctg cgtgccgtcg
     1861 ccgtcgttgc cgacgtcgat gcggaaattg ccgggctggg tcaccaccag cgccagcgtc
     1921 ggggtgtcga tctcgtagct ctggccttgg tccaggcggc gcacgtcgag gttcagcgtg
     1981 ccgtgcgtga gctcgacctg cgccagttcg tcgctgaggt tcagcatgcc gaagtcggta
     2041 ttgccggcca tgcgcagcgt gccgccgccc agctccagct cggcgcgcgc gccgtcgccg
     2101 gtggaaagct tgtcgccggt ggtcagcggg cggttgaggt ccgcgtcgcc ccaatccgtc
     2161 gcgccggccg gcagcaggcc gaggtcgccg gagacgtacg acaaccgcgc gacccggtcc
     2221 ggcggcggcg cgccggcatc gtcggacgat tgcgcatggg ccagcgccgc gccggccatc
     2281 agcagcagcg ccgccagcca cggcacggcg cgccggcgca gggtggaggt ggtggtcagc
     2341 acacgcatcg gatgtctccg ggttcccgcg gggcgggcgt cggtgtgcgg attatgcgca
     2401 tgccgatgcg ctgcgccgca tcgtccgcgc gccgattcag ccggcggatg gcgagcggcg
     2461 aaccgcggtt catccacggc cggcaattcc caccgcggcg catcccggtt accatccgca
     2521 ggcccgggcg ggcgtagctc aatggcagag ctgtagcttc ccaagctact gacgagggtt
     2581 cgattccctt cgcccgctcc aattccatcg catggcttgt gctcggccat gcttgcgagc
     2641 ttgccggtga tcgtgcggcg cacatgaaga tcgccatcct ttcgcgcaac gcccgcctgt
     2701 attcgaccca gcgtctggtg gatgcggcgc gcgcgcgcgg ccacgtggtg cgcgtgctcg
     2761 acccgctgcg ctgctacgtg cgcgtcgcgc cgggcagcgc ggcgatccgc tacaagggca
     2821 ggccggtgcg cgacatcgat gccgcgattc cgcgcatcag cgcgcacagc acgttctacg
     2881 gcaccgccgt gctgcgccag ctggaaatga tgggcgtgta cacgccgaac ccgtccgacg
     2941 ccgtgctgcg cgcgcgcgac aagctgcgca gcctgcagat cctcgccgcg cagggcatcg
     3001 cgatgccggt caccgtgttc ggcgacaacc ccgacgacac cgaggacctg ctggcgatgc
     3061 tgggcgagcc gccgcacgtg atcaagctca acgaaggcag ccagggcaca ggcgtggtgc
     3121 tggcggaaaa gcgcagcgcc tcgcagagcg tgatcgaggc cttccgcggc ctgtacgcca
     3181 acttcctggt ccaacagttc gtgcgcgaag ccaatgggcg cgacatccgc tgcttcgtgg
     3241 tcggcgacaa ggtggtggcg gcgatgcaac gcgaggca
//
LOCUS       DASSVL010000614         3405 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Rhodanobacter sp. isolate SMAG_U595 k141_324728, whole
            genome shotgun sequence.
ACCESSION   DASSVL010000614 DASSVL010000000
VERSION     DASSVL010000614.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968620
            Sequence Read Archive: SRR25158468
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodanobacter sp. (soil metagenome)
  ORGANISM  Rhodanobacter sp.
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Rhodanobacteraceae; Rhodanobacter.
REFERENCE   1  (bases 1 to 3405)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3405)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,143
            CDSs (total)                      :: 2,125
            Genes (coding)                    :: 2,104
            CDSs (with protein)               :: 2,104
            Genes (RNA)                       :: 18
            tRNAs                             :: 17
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 12 of 21
            Pseudo Genes (internal stop)      :: 3 of 21
            Pseudo Genes (multiple problems)  :: 1 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3405
                     /organism="Rhodanobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_324728"
                     /isolate="SMAG_U595"
                     /isolation_source="soil"
                     /db_xref="taxon:1883446"
                     /environmental_sample
                     /country="China"
                     /lat_lon="22.88888889 N 108.3725 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1293)
                     /locus_tag="VFM52_10705"
     CDS             complement(<1..1293)
                     /locus_tag="VFM52_10705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015446554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein transport protein"
                     /protein_id="HET8765680.1"
                     /translation="MSKSVRSLSGAARPLALAALSVAVAGALLPNAANASAFQLKENT
                     TQGLGRAYAGSATAGNDVSVVANNPAAMSDLDGTYFQADVTAINFSAKFKGSSHDVLG
                     RPINGGNGGDAGTTLPVPAFALSTKVSDRVNLGIAFDAPFGFQTEYDNNWMGRYDAIK
                     TKLQSLDATLSASFKINDQWSVGVSAIAERTSAELTNAINFNAVGLKVQQGIAQQAQA
                     QIQAAVAQVQAGMAAGQIPTATGAAMIQQIVAQGTAQAQAAAAGVAALTPQGADGMAR
                     VKGDNWAWGWQVGTYWKPTANDRVALDYRSRISHDIDGTANFTTTPGYDLLLANPALA
                     GSIPAFQHTTGTARLTNPATATLSYWHHEDKFGIGGDLAWTQWSVMRELTVNYANPSQ
                     PDTTLPFNWRDTWYASIGGEYYATNQLTLRAGFAIDQAP"
     gene            1483..1734
                     /locus_tag="VFM52_10710"
     CDS             1483..1734
                     /locus_tag="VFM52_10710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008436685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcgL domain-containing protein"
                     /protein_id="HET8765681.1"
                     /translation="MQCFVYASRRKPDTYVWLARRDGFDLLPKTLHDMLGELRFALEV
                     ALDVERRLPREDAGQILAHLSERGWHLQLPVEEAATDAD"
     gene            1800..>3405
                     /locus_tag="VFM52_10715"
     CDS             1800..>3405
                     /locus_tag="VFM52_10715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007081339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ankyrin repeat domain-containing protein"
                     /protein_id="HET8765682.1"
                     /translation="MTQPKSRRRPPLLPSLAWFLPGLALVALAGVVAHPLTLIPLLLA
                     NTLMMAAVCHLIGFDPEFSFKRTVLRRGAAHLVMFTLYAVIVFALVAWPMLALTQSHS
                     LAATLALVATLVLALAVLWRPWPAFGLVFVWDDAYPARHDGSWIFTATLRSLMFGRYL
                     AREERFFSHFLPAAVALLALTWSAIALSGLYGMLPAEIRTALLAVYGVLVLPLGCLVI
                     ANRTLHAMLCAQRDRQRPRAATATDDAAHGLPALPDGDEPLPSLTAAESTADTAGRAA
                     ALLAAARAGDVEHAVALVEAGADPATAPAGDDRDQRPVLMLAALLPDTRLLRALIANG
                     ADVNQASGGVTPLLAATRDCWHGRAEAVMTLLANGANPLVTDTDGRTALHGAVLCEEP
                     IVAAMLLDAGTPINALDQSGASALAVACTAANWPLVKFLLERGAKPVPAGGTPALVAA
                     AGIPDDDVAGVQLLLKHRAAVNAVDASHRSALIAAAAEGHELIARALCAAGADVTLAD
                     RNGSTALMEAARAGAVGIVQRLAEAQP"
BASE COUNT          479 a         1187 c         1173 g          566 t
ORIGIN      
        1 cggtgcctgg tcgatggcga agccggcgcg cagcgtcagc tggttggtgg cgtagtactc
       61 gccgccgatc gatgcgtacc aggtatcgcg ccagttgaac ggcagcgtgg tgtcgggctg
      121 cgacgggttg gcgtagttca ccgtcagctc gcgcatcaca ctccactgcg tccaggccag
      181 gtcgccgccg atgccgaact tgtcctcgtg gtgccagtag ctcaaggtcg cggtagccgg
      241 gttggtcagc cgcgcggtgc cggtggtgtg ctggaatgct ggaatgctgc cggccaaggc
      301 cggattggcc aacaacaagt cgtaacccgg cgtggtggtg aagttcgccg tgccatcgat
      361 gtcgtggctg atgcgcgagc ggtagtccaa cgcgacacgg tcgttcgcgg tcggcttcca
      421 gtaggtgccg acctgccagc cccacgccca gttgtcaccc ttgacgcgcg ccatgccgtc
      481 cgcgccctgc ggagtcagcg ccgcgacgcc agccgcagcc gcctgggcct gcgcggtgcc
      541 ctgcgcgacg atctgctgga tcatcgccgc cccggtggcg gtgggaatct gcccggccgc
      601 catgccagcc tgcacctgcg ccacggcagc ctggatctgg gcctgcgcct gctgcgcgat
      661 accctgctgg accttgaggc ccaccgcatt gaagttgatc gcgttggtca gctcggcgct
      721 ggtacgctcg gcgatcgcgc tgacgcccac gctccactgg tcgttgatct tgaacgaggc
      781 cgacagcgtg gcatccagcg actgcagctt ggtcttgatc gcgtcgtagc ggcccatcca
      841 gttgttgtcg tactcggtct ggaacccgaa cggcgcgtcg aacgcgatgc cgaggttcac
      901 ccggtcgctg accttggtgg acagcgcgaa tgccggcacc ggcaaggtgg tgccggcatc
      961 gccgccattg ccgccgttga tcggccggcc cagcacgtca tgcgagctgc ccttgaactt
     1021 ggcgctgaag ttgatggcgg tgacgtcggc ctggaagtag gtgccgtcga gatcgctcat
     1081 cgccgccggg ttgttggcca ccacggacac gtcattgccg gcggtcgccg agccggcgta
     1141 ggcgcgcccg aggccctgcg tggtgttttc cttcaactgg aaagcgctgg cgttggcggc
     1201 gttcggcaac aaggcacccg ccacggcgac gctgagcgcg gcaagcgcca atgggcgggc
     1261 ggcacccgaa agagaacgga ctgacttgga catcgcgggc tcctggacgg cggaacgatc
     1321 gacctgcatg gtgtcacaaa gaccaacaat tttcatacag gcgtttaaca tacgtgcccg
     1381 cactgtgcct gttcgaccgt gtgcttgcaa gtgtccgtgc agcaagcctg caacaccacg
     1441 caactccacc gcggcccatc cttccgttgc cggatgtcgc ccatgcaatg tttcgtctac
     1501 gcgagccggc gcaagccgga tacctacgtc tggctggcgc ggcgtgacgg ctttgacctg
     1561 ttgccgaaaa ccctacacga catgctgggg gagctgcgct ttgcgctgga agtggcgctc
     1621 gacgtcgaac gccgcctgcc gcgcgaggac gccggccaga tcctggcgca cctgagcgag
     1681 cgtggctggc acctgcagct gccggtggaa gaagccgcca ccgacgccga ttgacggcgc
     1741 ggtcgacggg ttaacacgag gttaccgtcc ggttcggcga cgattcctat actgtgccga
     1801 tgacccaacc gaaatcgcgc cgtcgcccgc cgctcctgcc ctccctcgcg tggttcctgc
     1861 ccggcttggc gctggtggcg ctggccggcg tggtggccca tccgctcacg ctgatcccgc
     1921 tgctgctggc caacaccttg atgatggcgg cggtctgcca cctgatcggc ttcgaccccg
     1981 agttcagctt caagcgcacc gtgctgcgcc gtggtgccgc ccacctggtg atgttcacgc
     2041 tgtacgcggt gatcgtgttc gcgctcgtcg cctggccgat gctggcgctg acccagtcgc
     2101 acagcctggc cgccacgctg gcgctggtgg ccacgctggt gctggcgctg gccgtgctgt
     2161 ggcggccatg gccggcgttc ggcctggtgt tcgtctggga cgacgcctac cccgcgcggc
     2221 acgatggctc gtggatcttt accgcgacgc tgcgcagcct gatgttcggc cgctacctcg
     2281 cccgcgagga acgcttcttc agccacttcc tgcctgccgc agtggccctg ctggcactga
     2341 cctggagcgc catcgcgctg agcgggctgt acggcatgct gccggcggag attcgcaccg
     2401 cgctgctggc cgtgtacggt gtgctggtcc tgccgctcgg ttgcctggtg atcgccaatc
     2461 gcacgctgca cgccatgctg tgcgcacagc gcgaccggca acggccacgc gcggcgaccg
     2521 ccaccgacga tgccgcgcat ggactgccgg cgctgccgga cggcgacgaa cccctgccgt
     2581 cactgacggc cgcggagagc accgcggata ctgctggtcg ggcggcggcc ttgctggctg
     2641 ccgcacgtgc cggcgacgtc gagcacgcgg tggcgctggt cgaggccggc gccgatccag
     2701 ccaccgcgcc cgccggcgac gaccgcgacc agcgcccggt gctgatgctg gcggccctgc
     2761 tgccggacac ccgcctgctg cgcgcgctga tcgcgaacgg cgccgacgtc aaccaggcga
     2821 gcggcggcgt gacgccgctg ctcgccgcca cgcgcgactg ctggcacggt cgcgccgaag
     2881 cggtgatgac cctgctcgcc aacggcgcca atccgctggt gaccgacacc gacgggcgca
     2941 ccgcgctgca cggcgcggtg ctctgcgagg agccgatcgt ggcggccatg ctgctcgatg
     3001 ccggcacgcc gatcaatgcg ctcgaccaat ccggcgccag cgcgctcgcg gtggcatgca
     3061 cagcggccaa ctggccgctg gtgaagttcc tgctcgaacg cggcgccaag ccggtgccgg
     3121 ccggtggcac gccggcgctg gttgccgccg ccggcatccc cgacgacgac gtcgccgggg
     3181 tgcaattgct gctcaagcat cgtgccgcag tcaacgcagt cgatgccagc catcgcagcg
     3241 cgctgatcgc ggcggcggcg gaaggccacg agctgatcgc gcgcgcactg tgtgccgccg
     3301 gcgccgatgt gacgctggcc gaccgcaacg gcagcacggc actgatggaa gccgcgcgcg
     3361 ccggcgccgt cggcatcgtg cagcggctgg ccgaagcgca gcccg
//
